585 4869 18 0 3 chrUextra 0 631 -29004025 + Invader2_I LTR Gypsy 3964 4592 0 7 585 2297 8 0 0 chrUextra 631 897 -29003759 + Invader2_LTR LTR Gypsy 1 266 0 7 585 11634 49 71 0 chrUextra 1095 2715 -29001941 - S2_DM DNA Tc1 0 1735 1 7 585 308 131 16 0 chrUextra 3774 3833 -29000823 - DM297_I LTR Gypsy -623 5544 5485 7 585 1616 131 139 29 chrUextra 3833 4342 -29000314 - DNAREP1_DM LINE Penelope 0 594 30 7 585 906 125 0 51 chrUextra 4785 4962 -28999694 + FW_DM LINE Jockey 1371 1538 -3154 7 585 3850 63 29 0 chrUextra 4965 5947 -28998709 + DMCR1A LINE CR1 3416 4470 0 7 585 456 314 6 6 chrUextra 6121 6297 -28998359 - NOMAD_I LTR Gypsy -1228 5344 5169 7 585 328 278 81 27 chrUextra 6634 6782 -28997874 - NOMAD_I LTR Gypsy -2872 3700 3545 7 585 926 302 43 12 chrUextra 6847 7269 -28997387 - NOMAD_I LTR Gypsy -3261 3311 2877 7 585 24 32 0 0 chrUextra 7751 7782 -28996874 + AT_rich Low_complexity Low_complexity 1 31 0 7 585 402 143 0 0 chrUextra 9132 9195 -28995461 + FW_DM LINE Jockey 209 271 -4421 7 585 3478 162 21 3 chrUextra 9193 9855 -28994801 + FW_DM LINE Jockey 948 1621 -3071 7 585 2113 155 110 5 chrUextra 9871 10317 -28994339 + FW_DM LINE Jockey 2644 3136 -1556 7 585 3083 82 70 8 chrUextra 10343 10813 -28993843 + DMRT1C LINE R1 4943 5441 -2 7 585 2717 135 77 0 chrUextra 10812 11371 -28993285 + FW_DM LINE Jockey 4084 4685 -7 7 585 342 280 95 67 chrUextra 12135 12988 -28991668 - Gypsy5_I LTR Gypsy -1628 6064 4748 7 585 868 299 30 7 chrUextra 13033 13440 -28991216 - Gypsy5_I LTR Gypsy -3924 2585 2170 7 585 203 100 80 0 chrUextra 13610 13660 -28990996 + (TTTA)n Simple_repeat Simple_repeat 4 57 0 7 585 198 0 0 0 chrUextra 14147 14169 -28990487 + (TTA)n Simple_repeat Simple_repeat 3 24 0 7 585 33 25 0 0 chrUextra 14642 14682 -28989974 + AT_rich Low_complexity Low_complexity 1 40 0 7 585 187 171 28 14 chrUextra 14682 14753 -28989903 + (TTTA)n Simple_repeat Simple_repeat 2 73 0 7 585 786 142 14 0 chrUextra 16723 16864 -28987792 + DNAREP1_DM LINE Penelope 4 146 -448 7 585 486 141 208 0 chrUextra 16898 17066 -28987590 + DMCR1A LINE CR1 2886 3088 -1382 7 585 1425 198 67 18 chrUextra 17148 17534 -28987122 - Gypsy_LTR LTR Gypsy -77 405 1 7 585 286 325 56 34 chrUextra 19634 20339 -28984317 + Invader2_I LTR Gypsy 2309 3027 -1861 7 585 286 308 19 19 chrUextra 20627 20789 -28983867 + Invader2_I LTR Gypsy 3263 3424 -1562 7 585 8831 48 38 14 chrUextra 21121 22337 -28982319 - DMCR1A LINE CR1 -2237 2233 989 7 585 3494 67 90 25 chrUextra 22334 22948 -28981708 - DMCR1A LINE CR1 -3816 654 1 7 585 1662 143 27 97 chrUextra 23220 23622 -28981034 - Gypsy12A_LTR LTR Gypsy -1904 376 3 7 585 3014 179 159 8 chrUextra 23625 25063 -28979593 - Gypsy12_I LTR Gypsy 0 5546 3892 7 585 2934 226 55 9 chrUextra 25063 25843 -28978813 - Gypsy12_I LTR Gypsy -2609 2937 2122 7 585 1142 161 172 10 chrUextra 25862 26287 -28978369 - Gypsy12_I LTR Gypsy -3899 1647 1154 7 585 2007 95 188 2 chrUextra 26289 26720 -28977936 + DMCR1A LINE CR1 3770 4280 -190 7 585 230 0 0 32 chrUextra 27166 27197 -28977459 + (GAA)n Simple_repeat Simple_repeat 1 30 0 7 585 8299 52 11 2 chrUextra 27579 28721 -28975935 - PROTOP_B DNA P 0 1153 1 7 585 23 33 0 0 chrUextra 29052 29082 -28975574 + AT_rich Low_complexity Low_complexity 1 30 0 7 585 30 0 0 0 chrUextra 29192 29222 -28975434 + AT_rich Low_complexity Low_complexity 1 30 0 7 585 3713 35 0 0 chrUextra 29292 29754 -28974902 - Baggins1 LINE LOA -271 5182 4721 7 585 7822 37 129 0 chrUextra 29752 30873 -28973783 - Baggins1 LINE LOA -1259 4194 2929 7 585 17293 43 59 0 chrUextra 30867 33136 -28971520 - Baggins1 LINE LOA -2839 2614 213 7 585 704 134 204 112 chrUextra 33169 33463 -28971193 + PROTOP_B DNA P 320 640 -513 7 585 3121 138 2 11 chrUextra 33482 34026 -28970630 + DMCR1A LINE CR1 3189 3727 -743 7 585 1087 129 59 10 chrUextra 34031 34235 -28970421 + DMCR1A LINE CR1 3859 4072 -398 7 585 183 146 0 0 chrUextra 39298 39339 -28965317 + (GA)n Simple_repeat Simple_repeat 1 41 0 7 585 22 0 0 0 chrUextra 39564 39586 -28965070 + AT_rich Low_complexity Low_complexity 1 22 0 7 585 246 62 0 0 chrUextra 41634 41666 -28962990 + (TG)n Simple_repeat Simple_repeat 1 32 0 7 585 23 0 0 0 chrUextra 43321 43344 -28961312 + AT_rich Low_complexity Low_complexity 1 23 0 7 585 186 103 0 0 chrUextra 43752 43781 -28960875 + (TG)n Simple_repeat Simple_repeat 1 29 0 7 585 25 51 0 0 chrUextra 44204 44243 -28960413 + AT_rich Low_complexity Low_complexity 1 39 0 7 585 26 0 0 0 chrUextra 45021 45047 -28959609 + AT_rich Low_complexity Low_complexity 1 26 0 7 585 4161 0 0 0 chrUextra 45367 45841 -28958815 - DOC LINE Jockey -4248 477 4 7 585 654 321 76 13 chrUextra 46739 47134 -28957522 - Copia_I LTR Copia -3857 736 317 7 585 251 281 0 0 chrUextra 47178 47260 -28957396 - Copia_I LTR Copia -4356 237 156 7 585 24 0 0 0 chrUextra 47424 47448 -28957208 + AT_rich Low_complexity Low_complexity 1 24 0 7 585 7742 55 43 1 chrUextra 47813 49421 -28955235 - FW2_DM LINE Jockey -95 3866 2191 7 585 5588 127 83 24 chrUextra 49423 50615 -28954041 - FW2_DM LINE Jockey -3258 1434 1 7 585 2794 45 132 4 chrUextra 51102 51865 -28952791 - Transib5 DNA Transib 0 3001 2141 7 585 198 0 0 0 chrUextra 51878 51900 -28952756 + (TTA)n Simple_repeat Simple_repeat 2 23 0 7 585 314 23 0 0 chrUextra 51903 51947 -28952709 - Transib5 DNA Transib -2146 855 812 7 585 1995 37 75 36 chrUextra 52016 52324 -28952332 - Transib5 DNA Transib -2186 815 496 7 585 24870 42 77 15 chrUextra 52330 55779 -28948877 + DMCR1A LINE CR1 1 3663 -807 7 585 4533 22 45 0 chrUextra 55879 56418 -28948238 - DIVER2_I LTR Pao -3151 996 434 7 585 1529 62 0 0 chrUextra 56655 56849 -28947807 - DIVER2_I LTR Pao -3708 439 246 7 585 5249 128 123 21 chrUextra 56848 58209 -28946447 - HETA LINE telomeric -3814 10663 9700 7 585 18619 168 54 53 chrUextra 58231 62252 -28942404 - HETA LINE telomeric -2139 3942 1 7 585 8558 131 71 26 chrUextra 62240 63833 -28940823 - HETA LINE telomeric 0 6081 4050 7 585 563 0 0 0 chrUextra 63838 63898 -28940758 + TAHRE LINE telomeric 10390 10449 -14 7 585 3276 29 11 3 chrUextra 64115 64497 -28940159 - DIVER2_LTR LTR Pao 0 385 1 7 585 1582 45 123 0 chrUextra 64619 64839 -28939817 - DMCR1A LINE CR1 -180 4290 4044 7 585 8958 54 16 0 chrUextra 64841 65937 -28938719 - BS2 LINE Jockey -44 4677 3564 7 585 3457 8 0 0 chrUextra 66037 66424 -28938232 + FW_DM LINE Jockey 4305 4691 -1 7 585 16935 56 76 19 chrUextra 66422 68868 -28935788 - ROOA_I LTR Pao -3533 3316 730 7 585 2802 34 0 0 chrUextra 68862 69188 -28935468 - ROOA_LTR LTR Pao -60 326 1 7 585 23 0 0 0 chrUextra 69645 69668 -28934988 + AT_rich Low_complexity Low_complexity 1 23 0 7 585 3955 69 62 3 chrUextra 69999 70556 -28934100 + DOC4_DM LINE Jockey 1 539 -2252 7 585 4192 83 35 2 chrUextra 70532 71132 -28933524 + DOC4_DM LINE Jockey 387 1006 -1785 7 585 2829 140 47 6 chrUextra 71131 71700 -28932956 + DOC4_DM LINE Jockey 1121 1877 -914 7 585 959 263 40 24 chrUextra 71714 72184 -28932472 + DOC4_DM LINE Jockey 3000 3479 -1261 7 585 2914 44 240 5 chrUextra 72205 72634 -28932022 + DOC4_DM LINE Jockey 2261 2791 0 7 585 21 0 0 0 chrUextra 72772 72793 -28931863 + AT_rich Low_complexity Low_complexity 1 21 0 7 585 232 351 0 0 chrUextra 72824 72901 -28931755 + Gypsy12_I LTR Gypsy 4916 4992 -554 7 585 425 139 76 0 chrUextra 74265 74344 -28930312 + DNAREP1_DM LINE Penelope 1 85 -509 7 585 787 0 102 0 chrUextra 74351 74586 -28930070 + (CAGAC)n Simple_repeat Simple_repeat 1 258 0 7 585 458 43 532 0 chrUextra 74690 74782 -28929874 + ROOA_I LTR Pao 6702 6842 -7 7 585 2520 29 55 0 chrUextra 74797 75108 -28929548 + ROOA_LTR LTR Pao 1 328 -58 7 585 5025 45 23 2 chrUextra 75320 75939 -28928717 + ROOA_I LTR Pao 3146 3777 -3072 7 585 4958 81 8 4 chrUextra 75955 76639 -28928017 + ROOA_I LTR Pao 4740 6075 -2181 7 585 658 147 0 18 chrUextra 76996 77107 -28927549 - MICROPIA_LTR LTR Gypsy -275 201 93 7 585 23 0 0 0 chrUextra 77340 77363 -28927293 + AT_rich Low_complexity Low_complexity 1 23 0 7 585 1538 313 17 17 chrUextra 77363 78000 -28926656 - ZAM_I LTR Gypsy -3372 4118 3482 7 585 273 31 0 0 chrUextra 78004 78036 -28926620 + ROOA_LTR LTR Pao 355 386 0 7 585 4127 90 86 8 chrUextra 78036 78678 -28925978 - I_DM LINE I -1447 4784 4092 7 585 14164 56 40 68 chrUextra 78675 80856 -28923800 + DOC5_DM LINE Jockey 2563 4682 0 7 585 691 168 25 35 chrUextra 80886 81089 -28923567 - DMCR1A LINE CR1 -4263 207 7 7 585 964 227 15 15 chrUextra 81198 81457 -28923199 - DM297_I LTR Gypsy -4804 1363 1105 7 585 235 114 0 22 chrUextra 81574 81619 -28923037 + DM297_LTR LTR Gypsy 275 318 -96 7 585 22 0 0 0 chrUextra 81753 81775 -28922881 + AT_rich Low_complexity Low_complexity 1 22 0 7 585 6841 103 12 22 chrUextra 81815 83146 -28921510 + I_DM LINE I 237 1715 -4516 7 585 4064 24 19 0 chrUextra 83246 83714 -28920942 - DOC3_DM LINE Jockey -2065 2675 2199 7 585 3822 47 11 0 chrUextra 83713 84183 -28920473 - DOC3_DM LINE Jockey -2845 1895 1421 7 585 2460 33 3 0 chrUextra 84834 85134 -28919522 - DOC3_DM LINE Jockey -3323 1417 1117 7 585 3102 35 32 0 chrUextra 85134 85508 -28919148 + ROOA_LTR LTR Pao 1 386 0 7 585 13094 51 16 34 chrUextra 85508 87277 -28917379 + ROOA_I LTR Pao 1 1737 -5112 7 585 4237 60 147 28 chrUextra 87275 87909 -28916747 + ROOA_I LTR Pao 2007 2715 -4134 7 585 949 63 102 0 chrUextra 87928 88055 -28916601 + ROOA_I LTR Pao 3104 3243 -3606 7 585 1648 137 3 10 chrUextra 88054 88334 -28916322 + ROOA_I LTR Pao 5147 5345 -1504 7 585 10205 45 99 1 chrUextra 88745 90085 -28914571 + ROOA_I LTR Pao 5372 6842 -7 7 585 2520 29 55 0 chrUextra 90100 90411 -28914245 + ROOA_LTR LTR Pao 1 328 -58 7 585 4981 17 51 0 chrUextra 90654 91419 -28913237 + DIVER2_I LTR Pao 3314 4117 -30 7 585 2591 23 74 3 chrUextra 91432 91743 -28912913 + DIVER2_LTR LTR Pao 53 385 0 7 585 344 329 63 24 chrUextra 91950 92283 -28912373 - MDG3_I LTR Gypsy -2430 2556 2211 7 585 581 232 13 19 chrUextra 92337 92491 -28912165 - DM412 LTR Gypsy -642 6255 6103 7 585 2081 97 91 0 chrUextra 92491 92799 -28911857 - Gypsy9_LTR LTR Gypsy 0 336 1 7 585 643 190 7 27 chrUextra 92800 92946 -28911710 - DM412 LTR Gypsy -792 6105 5963 7 585 1779 168 70 40 chrUextra 92943 93315 -28911341 - DNAREP1_DM LINE Penelope -19 575 193 7 585 620 39 52 0 chrUextra 93327 93404 -28911252 - DNAREP1_DM LINE Penelope -513 81 1 7 585 547 290 16 16 chrUextra 93435 93624 -28911032 - STALKER4_I LTR Gypsy -4529 2001 1813 7 585 21 57 0 0 chrUextra 94698 94733 -28909923 + AT_rich Low_complexity Low_complexity 1 35 0 7 585 24 0 0 0 chrUextra 95465 95489 -28909167 + AT_rich Low_complexity Low_complexity 1 24 0 7 585 299 286 35 30 chrUextra 95697 95899 -28908757 - I_DM LINE I -1003 5228 5026 7 585 1109 149 11 5 chrUextra 96375 96564 -28908092 - LINEJ1_DM LINE Jockey -2633 2387 2198 7 585 789 68 137 0 chrUextra 96595 96712 -28907944 - DNAREP1_DM LINE Penelope 0 594 462 7 585 822 341 86 16 chrUextra 97231 97872 -28906784 - Gypsy12_I LTR Gypsy -1035 4511 3826 7 585 9252 21 2 1 chrUextra 98043 99090 -28905566 + DMRT1A LINE R1 4129 5176 -7 7 585 2731 157 12 18 chrUextra 99142 99643 -28905013 - MDG1_I LTR Gypsy -6012 584 87 7 585 272 230 13 13 chrUextra 99945 100020 -28904636 - DM412B_LTR LTR Gypsy -262 309 235 7 585 226 244 65 65 chrUextra 100087 100179 -28904477 - TABOR_LTR LTR Gypsy -414 92 1 7 585 701 216 96 0 chrUextra 100179 100343 -28904313 + MDG1_I LTR Gypsy 4481 4660 -1936 7 585 4298 59 120 16 chrUextra 100338 100986 -28903670 - Baggins1 LINE LOA -96 5357 4642 7 585 1628 196 79 5 chrUextra 101016 101420 -28903236 + TABOR_I LTR Gypsy 4509 4942 -1394 7 585 3131 99 158 2 chrUextra 101486 102000 -28902656 + DNAREP1_DM LINE Penelope 1 594 0 7 585 1040 130 264 16 chrUextra 102026 102276 -28902380 + DNAREP1_DM LINE Penelope 184 495 -99 7 585 331 260 19 19 chrUextra 102370 102476 -28902180 + DM412 LTR Gypsy 2554 2659 -4238 7 585 1051 165 70 0 chrUextra 102589 102789 -28901867 + LINEJ1_DM LINE Jockey 2243 2456 -2564 7 585 417 234 120 9 chrUextra 102899 103007 -28901649 + Gypsy8_I LTR Gypsy 3952 4071 -276 7 585 342 199 56 82 chrUextra 103207 103342 -28901314 + Gypsy8_LTR LTR Gypsy 64 304 0 7 585 6669 64 6 1 chrUextra 104059 104902 -28899754 - DMCR1A LINE CR1 0 4470 3624 7 585 3437 26 60 0 chrUextra 104899 105314 -28899342 - DMCR1A LINE CR1 -1012 3458 3019 7 585 218 81 27 0 chrUextra 106593 106630 -28898026 + (TCCTG)n Simple_repeat Simple_repeat 1 38 0 7 585 333 140 0 0 chrUextra 107451 107508 -28897148 + (TCCA)n Simple_repeat Simple_repeat 2 58 0 7 585 26 0 0 0 chrUextra 109047 109073 -28895583 + AT_rich Low_complexity Low_complexity 1 26 0 7 585 248 154 0 0 chrUextra 110458 110497 -28894159 + TRANSIB2 DNA Transib 2531 2569 -275 7 585 321 26 0 0 chrUextra 111380 111418 -28893238 + (CATA)n Simple_repeat Simple_repeat 2 39 0 7 585 255 274 11 0 chrUextra 112129 112224 -28892432 + (TATATG)n Simple_repeat Simple_repeat 5 100 0 7 585 396 111 0 0 chrUextra 112302 112365 -28892291 + (TA)n Simple_repeat Simple_repeat 2 64 0 7 585 207 100 0 0 chrUextra 112512 112542 -28892114 + (CAAA)n Simple_repeat Simple_repeat 1 30 0 7 585 2687 7 0 0 chrUextra 112781 113089 -28891567 - ROO_LTR LTR Pao -120 308 1 7 585 449 147 90 107 chrUextra 113092 113214 -28891442 - G7_DM LINE Jockey -524 668 549 7 585 1010 313 60 7 chrUextra 113287 113706 -28890950 - G_DM LINE Jockey -873 3473 3033 7 585 267 161 899 0 chrUextra 113805 113894 -28890762 - G7_DM LINE Jockey -1002 190 22 7 585 312 286 57 15 chrUextra 114320 114502 -28890154 - G_DM LINE Jockey -289 1753 1557 7 585 248 250 0 14 chrUextra 114757 114826 -28889830 - G_DM LINE Jockey -3100 1246 1179 7 585 3646 173 159 5 chrUextra 115893 116835 -28887821 + MDG1_I LTR Gypsy 3399 4485 -2111 7 585 254 216 13 13 chrUextra 117045 117120 -28887536 - DM412B_LTR LTR Gypsy -262 309 235 7 585 378 218 102 62 chrUextra 117270 117687 -28886969 - Gypsy11_I LTR Gypsy -140 3384 3225 7 585 10295 174 35 3 chrUextra 117692 119830 -28884826 - DM412 LTR Gypsy -595 6302 4097 7 585 2188 271 31 12 chrUextra 119950 120778 -28883878 + FROGGER_I LTR Copia 1148 1991 -86 7 585 1482 54 0 0 chrUextra 121073 121429 -28883227 + (TAA)n Simple_repeat Simple_repeat 1 356 0 7 585 2093 121 30 56 chrUextra 121896 122376 -28882280 + MDG1_I LTR Gypsy 701 1118 -5478 7 585 9386 86 21 8 chrUextra 122675 124123 -28880533 + MDG1_I LTR Gypsy 1217 2683 -3913 7 585 14883 53 35 3 chrUextra 124118 126174 -28878482 + MDG1_I LTR Gypsy 2940 5060 -1536 7 585 1649 87 8 0 chrUextra 126175 126417 -28878239 + MDG1_I LTR Gypsy 5234 5477 -1119 7 585 3672 42 0 0 chrUextra 126425 126883 -28877773 + FW_DM LINE Jockey 1 458 -4234 7 585 1185 311 114 1 chrUextra 126999 127710 -28876946 - OSVALDO_I LTR Gypsy -3927 2726 1936 7 585 595 124 0 0 chrUextra 127715 127812 -28876844 - Gypsy8_I LTR Gypsy -4021 326 230 7 585 675 307 78 21 chrUextra 127888 128373 -28876283 - OSVALDO_I LTR Gypsy -5728 925 413 7 585 807 128 168 39 chrUextra 129290 129493 -28875163 - Gypsy8_I LTR Gypsy -4118 229 1 7 585 758 160 0 34 chrUextra 129493 129642 -28875014 - Gypsy8_LTR LTR Gypsy 0 304 161 7 585 5097 123 70 1 chrUextra 129656 130543 -28874113 + FW_DM LINE Jockey 3148 4095 -597 7 585 1528 132 4 4 chrUextra 130544 130795 -28873861 + FW_DM LINE Jockey 4259 4509 -183 7 73 261 256 0 0 chrUextra 131067 131153 -28873503 - Invader2_I LTR Gypsy -841 3751 3666 7 586 378 49 0 62 chrUextra 131246 131311 -28873345 + DMCR1A LINE CR1 1 61 -4409 7 586 13186 53 52 5 chrUextra 131289 133097 -28871559 + DMCR1A LINE CR1 195 2088 -2382 7 586 1253 239 52 80 chrUextra 133210 133807 -28870849 - Gypsy12_LTR LTR Gypsy -1486 850 271 7 586 8611 101 49 11 chrUextra 133804 135122 -28869534 - Gypsy12_I LTR Gypsy -156 5390 4024 7 586 18124 110 75 84 chrUextra 135153 138747 -28865909 - Gypsy12_I LTR Gypsy -1985 3561 1 7 586 2917 119 2 30 chrUextra 138747 139250 -28865406 - Gypsy12_LTR LTR Gypsy 0 2336 1848 7 586 1000 9 0 0 chrUextra 139350 139466 -28865190 - PROTOP_A DNA P -989 116 1 7 586 353 245 195 13 chrUextra 139939 140088 -28864568 - DIVER2_I LTR Pao -3231 916 741 7 586 2219 138 10 25 chrUextra 140324 140732 -28863924 + GTWIN_LTR LTR Gypsy 1 402 -93 7 586 2298 84 105 22 chrUextra 141316 141716 -28862940 - Mariner2_DM DNA Tc1 -1 911 479 7 586 2033 50 125 13 chrUextra 142123 142426 -28862230 - Mariner2_DM DNA Tc1 -479 433 97 7 586 26 50 0 0 chrUextra 143696 143736 -28860920 + AT_rich Low_complexity Low_complexity 1 40 0 7 586 265 61 0 0 chrUextra 144403 144436 -28860220 + DNAREP1_DM LINE Penelope 20 52 -542 7 586 4209 53 21 3 chrUextra 144441 145047 -28859609 - PROTOP_B DNA P -16 1137 521 7 586 3108 22 95 0 chrUextra 150780 151191 -28853465 - PROTOP_B DNA P -703 450 1 7 586 24 0 0 0 chrUextra 151617 151641 -28853015 + AT_rich Low_complexity Low_complexity 1 24 0 7 586 23 0 0 0 chrUextra 151771 151794 -28852862 + AT_rich Low_complexity Low_complexity 1 23 0 7 586 12581 27 27 1 chrUextra 151893 153496 -28851160 + TC1-2_DM DNA Tc1 1 1644 0 7 586 1061 307 70 66 chrUextra 153639 155423 -28849233 - ZAM_I LTR Gypsy -445 6767 4114 7 586 281 209 45 34 chrUextra 155845 155934 -28848722 - ACCORD2_I LTR Gypsy -4675 2537 2448 7 586 457 291 9 23 chrUextra 156279 156513 -28848143 - Gypsy9_I LTR Gypsy -3626 1051 868 7 586 22 0 0 0 chrUextra 156744 156766 -28847890 + AT_rich Low_complexity Low_complexity 1 22 0 7 586 51 31 0 0 chrUextra 160629 160694 -28843962 + AT_rich Low_complexity Low_complexity 1 65 0 7 586 358 17 68 0 chrUextra 160913 160972 -28843684 + Jockey2 LINE Jockey 3357 3419 -9 7 586 23 54 0 0 chrUextra 161131 161168 -28843488 + AT_rich Low_complexity Low_complexity 1 37 0 7 586 4892 39 40 0 chrUextra 161649 162267 -28842389 - BS2 LINE Jockey -961 3760 3118 7 586 9324 54 61 9 chrUextra 162264 163746 -28840910 - BS2 LINE Jockey -1940 2781 1223 7 586 5252 96 132 6 chrUextra 163744 164621 -28840035 - BS2 LINE Jockey -3723 998 11 7 586 6884 48 123 3 chrUextra 164642 165657 -28838999 - DMCR1A LINE CR1 -543 3927 2791 7 586 4663 72 79 2 chrUextra 165646 166761 -28837895 - DMCR1A LINE CR1 -1798 2672 1472 7 586 25 0 0 0 chrUextra 168102 168127 -28836529 + AT_rich Low_complexity Low_complexity 1 25 0 7 586 1083 23 0 0 chrUextra 172029 172158 -28832498 + PROTOP DNA P 958 1086 -3394 7 586 2934 12 0 0 chrUextra 172169 172491 -28832165 + PROTOP DNA P 4159 4480 0 7 586 392 276 0 38 chrUextra 172506 172638 -28832018 + Gypsy8_I LTR Gypsy 3727 3853 -494 7 586 309 199 6 223 chrUextra 172674 172849 -28831807 + Gypsy8_I LTR Gypsy 4038 4174 -173 7 586 405 157 0 0 chrUextra 173130 173200 -28831456 + Gypsy8_I LTR Gypsy 4278 4347 0 7 586 390 204 152 30 chrUextra 173201 173404 -28831252 + Gypsy8_LTR LTR Gypsy 1 304 0 7 586 397 193 0 24 chrUextra 173404 173489 -28831167 + Gypsy8_I LTR Gypsy 1 83 -4264 7 586 4545 40 2 3 chrUextra 173793 174363 -28830293 + DOC5_DM LINE Jockey 689 1257 -3425 7 586 13328 56 67 38 chrUextra 174362 176321 -28828335 + DOC5_DM LINE Jockey 1956 3972 -710 7 586 236 353 112 4 chrUextra 176595 176845 -28827811 - BLASTOPIA_I LTR Gypsy -1 4480 4204 7 586 3585 2 0 5 chrUextra 176974 177368 -28827288 - Copia_I LTR Copia -4201 392 1 7 586 2376 7 4 4 chrUextra 177368 177644 -28827012 - Copia_LTR LTR Copia 0 276 1 7 586 21 36 0 0 chrUextra 178053 178081 -28826575 + AT_rich Low_complexity Low_complexity 1 28 0 7 586 27 49 0 0 chrUextra 179220 179261 -28825395 + AT_rich Low_complexity Low_complexity 1 41 0 7 586 270 180 0 0 chrUextra 184009 184070 -28820586 + (CAGA)n Simple_repeat Simple_repeat 1 61 0 7 586 21 71 0 0 chrUextra 185407 185449 -28819207 + AT_rich Low_complexity Low_complexity 1 42 0 7 586 24 32 0 0 chrUextra 187331 187362 -28817294 + AT_rich Low_complexity Low_complexity 1 31 0 7 586 323 274 88 0 chrUextra 187487 187600 -28817056 + NOMAD_I LTR Gypsy 534 656 -5916 7 586 353 320 58 32 chrUextra 187912 188067 -28816589 + NOMAD_I LTR Gypsy 1741 1899 -4673 7 586 598 297 9 28 chrUextra 188445 188663 -28815993 + NOMAD_I LTR Gypsy 2358 2571 -4001 7 586 897 269 65 0 chrUextra 188704 188983 -28815673 + NOMAD_I LTR Gypsy 2920 3216 -3356 7 586 363 336 28 28 chrUextra 188970 189255 -28815401 + NOMAD_I LTR Gypsy 5288 5572 -1000 7 586 296 224 6 66 chrUextra 189327 189494 -28815162 + (CAAA)n Simple_repeat Simple_repeat 2 158 0 7 586 603 340 39 43 chrUextra 190191 190679 -28813977 + NOMAD_I LTR Gypsy 6077 6562 -10 7 586 23 0 0 0 chrUextra 191366 191389 -28813267 + AT_rich Low_complexity Low_complexity 1 23 0 7 586 581 244 312 29 chrUextra 191595 191832 -28812824 - Gypsy10_LTR LTR Gypsy -60 304 1 7 586 24 32 0 0 chrUextra 192460 192491 -28812165 + AT_rich Low_complexity Low_complexity 1 31 0 7 586 34 72 0 0 chrUextra 192692 192761 -28811895 + AT_rich Low_complexity Low_complexity 1 69 0 7 586 22 56 0 0 chrUextra 192921 192957 -28811699 + AT_rich Low_complexity Low_complexity 1 36 0 7 586 1791 135 133 24 chrUextra 192984 193561 -28811095 + DNAREP1_DM LINE Penelope 1 399 -195 7 586 3058 30 35 3 chrUextra 193694 194067 -28810589 - ROOA_LTR LTR Pao -1 385 1 7 586 9561 44 67 0 chrUextra 194079 195295 -28809361 - ROOA_I LTR Pao -9 6840 5544 7 586 1129 107 0 19 chrUextra 195395 195557 -28809099 - PROTOP_B DNA P -35 1118 960 7 586 270 158 397 30 chrUextra 195512 195643 -28809013 + Invader3_I LTR Gypsy 1521 1699 -3189 7 586 393 230 11 102 chrUextra 195721 195967 -28808689 + Gypsy_LTR LTR Gypsy 29 230 -252 7 586 614 152 300 15 chrUextra 195975 196175 -28808481 + Invader3_I LTR Gypsy 1554 1810 -3078 7 586 1831 24 158 0 chrUextra 196174 196415 -28808241 + DOC3_DM LINE Jockey 3389 3667 -1073 7 586 9613 188 42 3 chrUextra 196402 198190 -28806466 + Gypsy_I LTR Gypsy 4648 6505 -2 7 586 1215 208 81 53 chrUextra 198221 198618 -28806038 + Gypsy_LTR LTR Gypsy 29 436 -46 7 586 975 223 114 35 chrUextra 198642 198958 -28805698 + DMCR1A LINE CR1 1623 1963 -2507 7 586 572 161 245 6 chrUextra 198952 199115 -28805541 + DNAREP1_DM LINE Penelope 82 283 -311 7 586 2228 188 69 15 chrUextra 199117 199597 -28805059 + DMCR1A LINE CR1 2466 2971 -1499 7 586 243 203 0 33 chrUextra 199618 199679 -28804977 - DMCR1A LINE CR1 -1 4469 4411 7 586 592 190 17 8 chrUextra 199675 199792 -28804864 + Invader3_I LTR Gypsy 679 796 -4092 7 586 1993 62 0 8 chrUextra 199892 200153 -28804503 + BATUMI_I LTR Pao 7705 7963 0 7 586 1809 61 22 31 chrUextra 200153 200434 -28804222 + BATUMI_LTR LTR Pao 35 272 0 7 586 257 196 0 18 chrUextra 200500 200557 -28804099 + Gypsy8_LTR LTR Gypsy 1 56 -248 7 586 25 0 0 0 chrUextra 200558 200583 -28804073 + AT_rich Low_complexity Low_complexity 1 25 0 7 586 797 113 8 0 chrUextra 200626 200750 -28803906 + HMSBEAGLE_I LTR Gypsy 6403 6527 -2 7 586 237 196 0 0 chrUextra 200752 200798 -28803858 + DMLTR5 LTR Gypsy 1 46 -220 7 586 604 122 194 9 chrUextra 200848 200956 -28803700 + DMLTR5 LTR Gypsy 54 181 -85 7 586 4509 40 104 0 chrUextra 200958 201536 -28803120 + IVK_DM LINE I 4 641 -4761 7 586 5958 65 37 22 chrUextra 201549 202397 -28802259 + IVK_DM LINE I 733 1592 -3810 7 586 9620 56 30 0 chrUextra 202391 203619 -28801037 + IVK_DM LINE I 1822 3086 -2316 7 586 4580 58 11 0 chrUextra 203619 204185 -28800471 + IVK_DM LINE I 3257 3828 -1574 7 586 301 24 0 0 chrUextra 204285 204327 -28800329 + IDEFIX_LTR LTR Gypsy 553 594 0 7 586 254 270 67 67 chrUextra 204430 204640 -28800016 + TIRANT_I LTR Gypsy 5093 5302 -2390 7 586 743 296 109 40 chrUextra 204688 205284 -28799372 + ZAM_I LTR Gypsy 5236 5872 -1618 7 586 24 0 0 0 chrUextra 205510 205534 -28799122 + AT_rich Low_complexity Low_complexity 1 24 0 7 586 29 28 0 0 chrUextra 205660 205696 -28798960 + AT_rich Low_complexity Low_complexity 1 36 0 7 586 1450 288 38 13 chrUextra 206477 206955 -28797701 - Ulysses_I LTR Gypsy -2276 4105 3616 7 586 414 229 18 18 chrUextra 208324 208435 -28796221 - Ulysses_I LTR Gypsy -4319 2062 1952 7 586 2535 308 4 24 chrUextra 208626 209420 -28795236 + Gypsy6_I LTR Gypsy 1005 1782 -5230 7 586 276 344 6 69 chrUextra 209450 209625 -28795031 + Gypsy6_I LTR Gypsy 1908 2071 -4941 7 586 3953 280 61 52 chrUextra 209623 211580 -28793076 + Gypsy2_I LTR Gypsy 3256 5280 -855 7 586 430 355 0 0 chrUextra 211598 211753 -28792903 + Gypsy2_I LTR Gypsy 6023 6177 0 7 586 1704 79 26 70 chrUextra 211764 212037 -28792619 + Gypsy6A_LTR LTR Gypsy 42 302 -118 7 586 5146 23 3 2 chrUextra 212178 212779 -28791877 - PROTOP DNA P 0 4480 3879 7 586 30935 25 3 1 chrUextra 212879 217016 -28787640 + TART LINE telomeric 1 7889 -2765 7 586 368 71 18 0 chrUextra 218037 218093 -28786563 + (TA)n Simple_repeat Simple_repeat 1 57 0 7 586 213 159 0 0 chrUextra 219078 219122 -28785534 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 7 586 21 0 0 0 chrUextra 219917 219938 -28784718 + AT_rich Low_complexity Low_complexity 1 21 0 7 586 208 143 0 28 chrUextra 220471 220507 -28784149 + (CATA)n Simple_repeat Simple_repeat 4 38 0 7 586 535 246 77 43 chrUextra 221865 222076 -28782580 - DNAREP1_DM LINE Penelope 0 594 428 7 586 301 233 0 0 chrUextra 222164 222224 -28782432 - DNAREP1_DM LINE Penelope -533 61 2 7 586 35 24 0 0 chrUextra 223202 223244 -28781412 + AT_rich Low_complexity Low_complexity 1 42 0 7 586 1636 37 0 0 chrUextra 225482 225672 -28778984 + DMCR1A LINE CR1 4281 4470 0 7 586 871 54 0 9 chrUextra 225747 225859 -28778797 + ROOA_I LTR Pao 6730 6840 -9 7 586 3569 129 86 0 chrUextra 226210 226792 -28777864 - DMRT1B LINE R1 -2213 2970 2339 7 586 520 95 465 0 chrUextra 226796 226912 -28777744 - DMRT1B LINE R1 -3651 1532 1363 7 586 1007 173 5 0 chrUextra 226911 227096 -28777560 - DMRT1B LINE R1 -3959 1224 1039 7 586 385 127 0 0 chrUextra 227098 227153 -28777503 - DMRT1B LINE R1 -4382 801 747 7 586 735 116 311 7 chrUextra 227246 227394 -28777262 - DMCR1A LINE CR1 -559 3911 3719 7 586 1238 146 43 3 chrUextra 227407 227725 -28776931 - DMCR1A LINE CR1 -2239 2231 1833 7 586 342 330 107 22 chrUextra 228597 228916 -28775740 - Ulysses_I LTR Gypsy -3936 2445 2100 7 586 1190 129 59 10 chrUextra 229015 229219 -28775437 - DMCR1A LINE CR1 -398 4072 3859 7 586 1084 183 5 5 chrUextra 229224 229427 -28775229 - DMCR1A LINE CR1 -743 3727 3525 7 586 2562 7 3 0 chrUextra 229527 229827 -28774829 + Invader2_I LTR Gypsy 4292 4592 0 7 586 2401 19 0 0 chrUextra 229827 230093 -28774563 + Invader2_LTR LTR Gypsy 1 266 0 7 586 2055 50 19 4 chrUextra 230093 230354 -28774302 - DMCR1A LINE CR1 -1008 3462 3198 7 586 16524 50 56 9 chrUextra 230352 232768 -28771888 - DMCR1A LINE CR1 -1940 2530 1 7 586 1973 250 28 28 chrUextra 232783 233417 -28771239 - Copia_I LTR Copia -327 4266 3633 7 586 7136 133 88 7 chrUextra 233542 235875 -28768781 - BS2 LINE Jockey -2195 2526 4 7 586 550 43 14 0 chrUextra 235889 235959 -28768697 + Transib-N1_DM DNA Transib 444 514 0 7 586 24 32 0 0 chrUextra 236029 236060 -28768596 + AT_rich Low_complexity Low_complexity 1 31 0 7 586 34 42 0 0 chrUextra 236380 236428 -28768228 + AT_rich Low_complexity Low_complexity 1 48 0 7 586 813 100 282 0 chrUextra 236985 237155 -28767501 + DNAREP1_DM LINE Penelope 202 419 -175 7 586 568 103 52 0 chrUextra 237182 237279 -28767377 - Jockey2 LINE Jockey -6 3422 3321 7 586 699 24 0 0 chrUextra 237287 237372 -28767284 + (TAA)n Simple_repeat Simple_repeat 3 87 0 7 586 1838 263 0 0 chrUextra 237472 237939 -28766717 - G6_DM LINE Jockey -847 1195 729 7 586 547 258 141 0 chrUextra 238010 238208 -28766448 - Gypsy11_I LTR Gypsy -1567 1957 1732 7 586 680 97 0 0 chrUextra 238443 238536 -28766120 - DNAREP1_DM LINE Penelope -156 438 346 7 586 709 153 17 24 chrUextra 238561 238747 -28765909 - DNAREP1_DM LINE Penelope -262 332 59 7 586 23 68 0 0 chrUextra 239400 239444 -28765212 + AT_rich Low_complexity Low_complexity 1 44 0 7 586 2744 87 66 1 chrUextra 239977 240443 -28764213 - DOC3_DM LINE Jockey -15 4710 4188 7 586 5268 77 72 18 chrUextra 240447 241266 -28763390 - DOC3_DM LINE Jockey -952 3841 2911 7 586 5655 31 30 0 chrUextra 241366 242036 -28762620 - FW_DM LINE Jockey -4002 690 1 7 586 16124 37 37 0 chrUextra 242044 243980 -28760676 + ROOA_I LTR Pao 3304 5310 -1539 7 586 4525 77 53 20 chrUextra 244419 245082 -28759574 + ROOA_I LTR Pao 5349 6033 -816 7 586 32 0 0 0 chrUextra 246509 246541 -28758115 + AT_rich Low_complexity Low_complexity 1 32 0 7 586 35 24 0 0 chrUextra 246640 246682 -28757974 + AT_rich Low_complexity Low_complexity 1 42 0 7 586 1071 168 142 0 chrUextra 248993 249254 -28755402 - FW_DM LINE Jockey -3685 1007 710 7 586 43 47 0 0 chrUextra 249522 249586 -28755070 + AT_rich Low_complexity Low_complexity 1 64 0 7 586 235 323 53 23 chrUextra 249838 249971 -28754685 + Gypsy12_I LTR Gypsy 1439 1575 -3971 7 586 271 351 0 0 chrUextra 250919 251033 -28753623 + Gypsy12_I LTR Gypsy 3213 3326 -2220 7 586 49 0 0 0 chrUextra 251396 251445 -28753211 + AT_rich Low_complexity Low_complexity 1 49 0 7 586 25 51 0 0 chrUextra 251604 251643 -28753013 + AT_rich Low_complexity Low_complexity 1 39 0 7 586 22 56 0 0 chrUextra 251728 251764 -28752892 + AT_rich Low_complexity Low_complexity 1 36 0 7 586 358 290 8 8 chrUextra 251873 252005 -28752651 + BURDOCK_I LTR Gypsy 866 997 -4863 7 586 1032 136 65 68 chrUextra 252865 253158 -28751498 - Gypsy12A_LTR LTR Gypsy -535 1745 1454 7 586 939 0 0 0 chrUextra 253176 253284 -28751372 - DMCR1A LINE CR1 -168 4302 4195 7 586 4160 50 45 11 chrUextra 253275 253807 -28750849 - DMCR1A LINE CR1 -492 3978 3429 7 586 850 49 164 0 chrUextra 253805 253927 -28750729 - DMCR1A LINE CR1 -2578 1892 1751 7 586 1894 93 291 14 chrUextra 253926 254284 -28750372 - DMCR1A LINE CR1 -2989 1481 1025 7 586 1361 129 28 11 chrUextra 254290 254601 -28750055 - DMCR1A LINE CR1 -3899 571 7 7 586 257 146 0 0 chrUextra 254668 254709 -28749947 + DMCR1A LINE CR1 744 784 -3686 7 586 255 174 0 0 chrUextra 254854 254900 -28749756 + NOMAD_I LTR Gypsy 6527 6572 0 7 586 1217 165 125 34 chrUextra 255247 255711 -28748945 - DNAREP1_DM LINE Penelope -201 393 1 7 586 523 33 0 0 chrUextra 255830 255891 -28748765 - DNAREP1_DM LINE Penelope -532 62 2 7 586 21243 43 61 29 chrUextra 256592 259434 -28745222 - Gypsy4_I LTR Gypsy -3256 3032 1 7 586 1930 70 6 109 chrUextra 259434 259754 -28744902 - Gypsy4_LTR LTR Gypsy 0 287 1 7 586 4967 22 20 21 chrUextra 260246 260857 -28743799 - ROO_I LTR Pao -7646 610 1 7 586 3478 45 2 30 chrUextra 260857 261297 -28743359 - ROO_LTR LTR Pao 0 428 1 7 586 2371 90 0 3 chrUextra 261397 261720 -28742936 - DMCR1A LINE CR1 -345 4125 3804 7 587 270 307 52 40 chrUextra 262779 262952 -28741704 - Ulysses_I LTR Gypsy -4333 2048 1874 7 587 720 310 3 29 chrUextra 263272 263578 -28741078 + Gypsy12_I LTR Gypsy 3826 4123 -1423 7 587 3390 5 0 0 chrUextra 263871 264250 -28740406 - QUASIMODO_LTR LTR Gypsy -279 379 1 7 587 212 146 0 111 chrUextra 265352 265406 -28739250 + polypurine Low_complexity Low_complexity 2 49 0 7 587 201 138 0 0 chrUextra 265551 265580 -28739076 + (TG)n Simple_repeat Simple_repeat 1 29 0 7 587 29 0 0 0 chrUextra 267789 267818 -28736838 + AT_rich Low_complexity Low_complexity 1 29 0 7 587 4146 12 0 16 chrUextra 271027 271525 -28733131 - Gypsy4_I LTR Gypsy -5798 490 1 7 587 2572 14 3 0 chrUextra 271525 271811 -28732845 - Gypsy4_LTR LTR Gypsy 0 287 1 7 587 2985 86 21 7 chrUextra 271812 272243 -28732413 + DM297_I LTR Gypsy 1302 1738 -4429 7 587 1964 60 41 4 chrUextra 272243 272513 -28732143 + DM297_I LTR Gypsy 2580 2859 -3308 7 587 6793 77 14 17 chrUextra 272511 273477 -28731179 + DM297_I LTR Gypsy 2991 3953 -2214 7 587 3349 54 69 0 chrUextra 273485 273932 -28730724 - IVK_DM LINE I -10 5392 4915 7 587 3596 71 75 0 chrUextra 273931 274453 -28730203 + DM297_I LTR Gypsy 3943 4503 -1664 7 587 1407 58 0 6 chrUextra 274553 274727 -28729929 + LSU-rRNA_Dme rRNA rRNA 2406 2578 -1322 7 587 5491 69 38 3 chrUextra 274719 275434 -28729222 + R2_DM LINE R2 1644 2383 -1224 7 587 348 317 40 56 chrUextra 275545 275855 -28728801 - G6_DM LINE Jockey -2618 484 277 7 587 397 337 45 19 chrUextra 276111 276423 -28728233 - G6_DM LINE Jockey -866 1176 857 7 587 3124 203 38 18 chrUextra 277043 277864 -28726792 - DMRT1A LINE R1 0 5183 4284 7 587 702 99 0 0 chrUextra 278111 278212 -28726444 + Gypsy9_LTR LTR Gypsy 1 101 -235 7 587 2203 84 46 71 chrUextra 278235 278672 -28725984 + Gypsy9_I LTR Gypsy 122 547 -4130 7 587 384 77 0 0 chrUextra 278724 278776 -28725880 + Gypsy9_I LTR Gypsy 1243 1294 -3383 7 587 2952 153 9 9 chrUextra 278779 279437 -28725219 + Gypsy9_I LTR Gypsy 1529 2322 -3966 7 587 1632 183 26 2 chrUextra 279442 279851 -28724805 + Gypsy9_I LTR Gypsy 2995 3243 -1434 7 587 2102 51 43 20 chrUextra 279861 280162 -28724494 + Gypsy9_I LTR Gypsy 3352 3659 -1018 7 587 1708 80 91 34 chrUextra 280162 280458 -28724198 + Gypsy9_I LTR Gypsy 4129 4441 -236 7 587 1337 108 19 0 chrUextra 280463 280676 -28723980 + Gypsy9_LTR LTR Gypsy 120 336 0 7 587 32 86 0 0 chrUextra 280796 280877 -28723779 + AT_rich Low_complexity Low_complexity 1 81 0 7 587 356 328 21 19 chrUextra 281003 281213 -28723443 + DMRT1B LINE R1 684 912 -4271 7 587 1083 62 50 0 chrUextra 281920 282080 -28722576 - STALKER4_LTR LTR Gypsy -234 168 1 7 587 2924 23 3 0 chrUextra 284719 285071 -28719585 + ROO_LTR LTR Pao 76 428 0 7 587 24 0 0 0 chrUextra 285837 285861 -28718795 + AT_rich Low_complexity Low_complexity 1 24 0 7 587 1751 113 70 0 chrUextra 286016 286316 -28718340 + MAX_LTR LTR Pao 1 321 0 7 587 22 0 0 0 chrUextra 286624 286646 -28718010 + AT_rich Low_complexity Low_complexity 1 22 0 7 587 416 122 0 118 chrUextra 287278 287371 -28717285 - Gypsy8_LTR LTR Gypsy -5 299 218 7 587 898 179 14 29 chrUextra 287385 287592 -28717064 - LINEJ1_DM LINE Jockey -2508 2512 2309 7 587 2109 52 118 50 chrUextra 287601 287964 -28716692 + DMCR1A LINE CR1 1 388 -4082 7 587 823 10 0 0 chrUextra 288064 288166 -28716490 - DM176_LTR LTR Gypsy -405 102 1 7 587 3795 0 0 0 chrUextra 288167 288604 -28716052 - ACCORD_LTR LTR Gypsy -121 437 1 7 587 3976 68 25 22 chrUextra 288607 289195 -28715461 + TC1_DM DNA Tc1 196 785 -881 7 587 663 104 16 33 chrUextra 289297 289485 -28715171 + DMRT1B LINE R1 2962 3181 -2002 7 587 447 18 0 0 chrUextra 289487 289542 -28715114 + DMRT1B LINE R1 3667 3721 -1462 7 587 4755 143 112 1 chrUextra 289541 290432 -28714224 + DMRT1B LINE R1 3776 4765 -418 7 587 542 65 0 0 chrUextra 290441 290518 -28714138 + DMRT1B LINE R1 5107 5183 0 7 587 544 339 46 33 chrUextra 290763 291217 -28713439 - NINJA_I LTR Pao -713 5298 4839 7 587 9650 23 0 1 chrUextra 291382 292555 -28712101 + FW_DM LINE Jockey 3521 4692 0 7 587 1781 276 48 19 chrUextra 292557 292692 -28711964 + Copia_I LTR Copia 3266 3396 -1197 7 587 423 83 0 0 chrUextra 292692 292752 -28711904 + (TA)n Simple_repeat Simple_repeat 2 61 0 7 587 1781 276 48 19 chrUextra 292752 293451 -28711205 + Copia_I LTR Copia 3397 4123 -470 7 587 3496 34 14 0 chrUextra 294639 295076 -28709580 - DMRT1A LINE R1 -4740 443 1 7 587 443 179 71 65 chrUextra 295111 295266 -28709390 + Gypsy11_I LTR Gypsy 538 693 -2831 7 587 295 136 121 114 chrUextra 295242 295391 -28709265 + MDG1_I LTR Gypsy 657 806 -5790 7 587 3698 276 50 28 chrUextra 295916 297740 -28706916 + STALKER4_I LTR Gypsy 1802 3665 -2865 7 587 12966 58 19 6 chrUextra 297848 299752 -28704904 - I_DM LINE I -4205 2026 99 7 587 2557 113 155 22 chrUextra 299764 300409 -28704247 + ACCORD2_I LTR Gypsy 364 1313 -5899 7 587 1403 80 93 0 chrUextra 300438 300663 -28703993 - ROVER-LTR_DM LTR Gypsy -121 246 1 7 587 1142 171 39 18 chrUextra 300662 300942 -28703714 - ROVER-I_DM LTR Gypsy 0 6584 6299 7 587 1598 10 0 0 chrUextra 301048 301251 -28703405 - Invader2_I LTR Gypsy -4389 203 1 7 587 2319 4 0 0 chrUextra 301251 301517 -28703139 - Invader2_LTR LTR Gypsy 0 266 1 7 587 317 224 102 0 chrUextra 301620 301718 -28702938 + DNAREP1_DM LINE Penelope 86 193 -401 7 587 1553 135 86 33 chrUextra 301908 302409 -28702247 + DNAREP1_DM LINE Penelope 100 486 -108 7 587 377 196 0 20 chrUextra 302409 302508 -28702148 - DMLTR5 LTR Gypsy 0 266 170 7 587 5661 56 3 3 chrUextra 302505 303259 -28701397 - IVK_DM LINE I -4 5398 4645 7 587 1613 41 59 0 chrUextra 303258 303477 -28701179 - IVK_DM LINE I -1010 4392 4161 7 587 1539 134 93 12 chrUextra 303477 303809 -28700847 - MDG1_LTR LTR Gypsy -30 412 54 7 587 1533 19 0 0 chrUextra 303809 304136 -28700520 + (TTA)n Simple_repeat Simple_repeat 1 327 0 7 587 377 339 51 34 chrUextra 304236 304590 -28700066 - NINJA_I LTR Pao -813 5198 4839 7 587 3959 73 3 23 chrUextra 304848 305463 -28699193 + DOC5_DM LINE Jockey 104 706 -3976 7 587 3091 33 7 16 chrUextra 305464 305892 -28698764 + DOC5_DM LINE Jockey 1419 1842 -2840 7 587 809 62 0 0 chrUextra 305890 306002 -28698654 + DOC5_DM LINE Jockey 1955 2066 -2616 7 587 2173 89 42 0 chrUextra 305995 306332 -28698324 + DOC5_DM LINE Jockey 2277 2627 -2055 7 587 5198 34 108 39 chrUextra 306329 307281 -28697375 + DOC5_DM LINE Jockey 3326 4343 -339 7 587 2609 13 3 6 chrUextra 307394 307709 -28696947 + ROO_LTR LTR Pao 115 428 0 7 587 1199 211 67 106 chrUextra 307747 308287 -28696369 + G7_DM LINE Jockey 664 1182 -10 7 587 475 155 10 0 chrUextra 308303 308400 -28696256 - MDG1_I LTR Gypsy -3165 3431 3334 7 587 313 27 0 0 chrUextra 308427 308464 -28696192 - BS3_DM LINE Jockey -28 1762 1726 7 587 15073 37 40 2 chrUextra 308477 310446 -28694210 - DOC3_DM LINE Jockey 0 4740 2698 7 587 9065 33 6 5 chrUextra 310546 311681 -28692975 - DMCR1A LINE CR1 -3334 1136 1 7 587 2440 104 116 108 chrUextra 311689 312293 -28692363 + DOC5_DM LINE Jockey 2687 3295 -1387 7 587 2412 41 12 3 chrUextra 312300 312640 -28692016 + DOC5_DM LINE Jockey 4340 4682 0 7 587 22 80 0 0 chrUextra 313927 313977 -28690679 + AT_rich Low_complexity Low_complexity 1 50 0 7 587 1521 62 0 0 chrUextra 314344 314552 -28690104 - ZAM_LTR LTR Gypsy -264 208 1 7 587 1379 134 3 75 chrUextra 314553 314835 -28689821 - FW_DM LINE Jockey -4334 358 97 7 587 596 143 0 9 chrUextra 314978 315084 -28689572 - Gypsy12A_LTR LTR Gypsy -997 1283 1179 7 587 228 267 0 0 chrUextra 316443 316518 -28688138 - Invader2_I LTR Gypsy -2396 2196 2122 7 587 8086 49 40 7 chrUextra 316763 317879 -28686777 - TRANSIB2 DNA Transib -1445 1399 247 7 587 402 115 115 0 chrUextra 317867 317963 -28686693 - TRANSIB2 DNA Transib -2737 107 1 7 587 535 333 18 7 chrUextra 319450 319731 -28684925 + OSVALDO_I LTR Gypsy 508 791 -5862 7 587 7719 15 12 0 chrUextra 319838 320767 -28683889 - Copia2_I LTR Copia -699 3463 2524 7 587 11903 9 41 0 chrUextra 320760 322813 -28681843 - Copia2_I LTR Copia -1825 2337 201 7 587 2861 179 143 9 chrUextra 323280 324074 -28680582 - LINEJ1_DM LINE Jockey -213 4807 3908 7 587 3276 102 4 10 chrUextra 324092 324606 -28680050 + DMRT1C LINE R1 3633 4143 -1300 7 587 240 118 0 0 chrUextra 324604 324638 -28680018 + DMRT1C LINE R1 4316 4349 -1094 7 587 1962 139 168 1 chrUextra 324659 325336 -28679320 + DMRT1C LINE R1 4653 5443 0 7 587 3268 87 23 59 chrUextra 325965 326525 -28678131 + Gypsy8_I LTR Gypsy 1207 1746 -2601 7 587 4293 109 139 36 chrUextra 326515 327419 -28677237 + Gypsy8_I LTR Gypsy 2152 3148 -1199 7 587 480 90 0 53 chrUextra 327474 327568 -28677088 + Gypsy8_I LTR Gypsy 3331 3419 -928 7 587 9410 49 0 2 chrUextra 327655 328875 -28675781 - DMCR1A LINE CR1 -1012 3458 2241 7 587 7099 43 82 5 chrUextra 328975 330296 -28674360 - DOC3_DM LINE Jockey -3254 1486 63 7 587 527 35 114 23 chrUextra 330316 330404 -28674252 - DOC3_DM LINE Jockey -4640 100 5 7 587 228 267 0 0 chrUextra 331450 331525 -28673131 + Invader2_I LTR Gypsy 2122 2196 -2396 7 587 309 217 0 0 chrUextra 332056 332116 -28672540 - NOMAD_I LTR Gypsy -2872 3700 3641 7 587 865 256 114 12 chrUextra 332217 332541 -28672115 - NOMAD_I LTR Gypsy -3182 3390 3034 7 587 259 259 11 11 chrUextra 332696 332786 -28671870 - NOMAD_I LTR Gypsy -5021 1551 1462 7 587 232 323 0 0 chrUextra 332827 332892 -28671764 - NOMAD_I LTR Gypsy -5184 1388 1324 7 587 4410 62 51 14 chrUextra 333109 333696 -28670960 - DMCR1A LINE CR1 -2349 2121 1513 7 587 4746 37 122 1 chrUextra 333692 334786 -28669870 - DMCR1A LINE CR1 -3160 1310 84 7 587 1723 330 14 11 chrUextra 334923 335570 -28669086 - Gypsy6_I LTR Gypsy -5454 1558 910 7 587 30 45 0 0 chrUextra 335816 335860 -28668796 + AT_rich Low_complexity Low_complexity 1 44 0 7 587 182 91 0 29 chrUextra 336001 336035 -28668621 + (TGG)n Simple_repeat Simple_repeat 2 34 0 7 587 2015 91 16 54 chrUextra 336108 336422 -28668234 - Gypsy6A_LTR LTR Gypsy -118 302 1 7 587 21 0 0 0 chrUextra 336564 336585 -28668071 + AT_rich Low_complexity Low_complexity 1 21 0 7 587 21 0 0 0 chrUextra 336752 336773 -28667883 + AT_rich Low_complexity Low_complexity 1 21 0 7 587 218 284 0 43 chrUextra 337162 337254 -28667402 + A-rich Low_complexity Low_complexity 1 88 0 7 587 22 0 0 0 chrUextra 337297 337319 -28667337 + AT_rich Low_complexity Low_complexity 1 22 0 7 587 2296 334 54 45 chrUextra 338183 340366 -28664290 + Invader6_I LTR Gypsy 2 2194 -1905 7 587 784 69 10 0 chrUextra 340363 340464 -28664192 - PROTOP_B DNA P -1051 102 1 7 587 462 114 0 0 chrUextra 340605 340675 -28663981 + (TA)n Simple_repeat Simple_repeat 1 70 0 7 587 1050 344 56 29 chrUextra 340678 341760 -28662896 - Gypsy4_I LTR Gypsy -192 6096 5112 7 587 2421 315 25 17 chrUextra 341824 342901 -28661755 - Gypsy4_I LTR Gypsy -1745 4543 3458 7 587 234 239 0 0 chrUextra 342912 342958 -28661698 - Gypsy4_I LTR Gypsy -2791 3497 3452 7 587 1298 307 163 14 chrUextra 343543 344315 -28660341 - Copia2_I LTR Copia -54 4108 3222 7 587 1297 309 53 21 chrUextra 344361 345038 -28659618 + BLASTOPIA_I LTR Gypsy 2501 3199 -1282 7 587 2027 41 146 0 chrUextra 345224 345491 -28659165 + Baggins1 LINE LOA 2 307 -5146 7 587 2546 33 7 0 chrUextra 345496 345801 -28658855 + Baggins1 LINE LOA 635 941 -4512 7 587 2198 55 7 0 chrUextra 345788 346060 -28658596 + Baggins1 LINE LOA 1286 1559 -3894 7 587 25 31 0 0 chrUextra 346371 346403 -28658253 + AT_rich Low_complexity Low_complexity 1 32 0 7 587 21 36 0 0 chrUextra 348360 348388 -28656268 + AT_rich Low_complexity Low_complexity 1 28 0 7 587 201 305 24 12 chrUextra 348979 349062 -28655594 + (TCG)n Simple_repeat Simple_repeat 3 86 0 7 587 1243 205 71 81 chrUextra 349416 349883 -28654773 - Gypsy_LTR LTR Gypsy -20 462 1 7 587 1411 74 0 38 chrUextra 350144 350355 -28654301 + DMCR1A LINE CR1 129 331 -4139 7 587 9889 27 2 2 chrUextra 350349 351481 -28653175 + DMCR1A LINE CR1 446 1577 -2893 7 587 14644 41 34 19 chrUextra 351581 353429 -28651227 + DIVER2_I LTR Pao 1207 3082 -1065 7 587 6031 21 51 1 chrUextra 353428 354149 -28650507 + DIVER2_I LTR Pao 3199 3955 -192 7 587 2359 82 3 3 chrUextra 354249 354568 -28650088 + S_DM DNA Tc1 671 989 -747 7 587 5266 40 15 1 chrUextra 354568 355222 -28649434 + PROTOP DNA P 1 663 -3817 7 587 536 62 0 0 chrUextra 355243 355307 -28649349 - QUASIMODO_I LTR Gypsy -5996 64 1 7 587 5019 49 30 9 chrUextra 355307 355907 -28648749 - QUASIMODO_LTR LTR Gypsy 0 658 40 7 587 195 42 0 0 chrUextra 355907 355931 -28648725 + (TG)n Simple_repeat Simple_repeat 1 24 0 7 587 5019 49 30 9 chrUextra 355931 355975 -28648681 - QUASIMODO_LTR LTR Gypsy -619 39 1 7 587 232 174 0 0 chrUextra 356749 356795 -28647861 + (TTA)n Simple_repeat Simple_repeat 2 47 0 7 587 27 96 0 0 chrUextra 357709 357792 -28646864 + AT_rich Low_complexity Low_complexity 1 83 0 7 587 20813 36 21 6 chrUextra 359533 362041 -28642615 + DOC3_DM LINE Jockey 835 3379 -1361 7 587 13783 157 7 16 chrUextra 362141 364559 -28640097 + HETA LINE telomeric 1542 3938 -2143 7 587 2588 25 164 0 chrUextra 365006 365374 -28639282 - ROO_LTR LTR Pao 0 428 1 7 587 1463 124 167 15 chrUextra 365378 365677 -28638979 + DNAREP1_DM LINE Penelope 85 545 -49 7 587 1924 270 75 20 chrUextra 367260 368442 -28636214 + QUASIMODO_I LTR Gypsy 4701 6054 -6 7 587 647 116 0 0 chrUextra 369028 369123 -28635533 + DNAREP1_DM LINE Penelope 500 594 0 7 587 2258 55 34 0 chrUextra 369391 369683 -28634973 - DOC4_DM LINE Jockey -8 2783 2482 7 587 2094 21 0 12 chrUextra 369783 370026 -28634630 + BATUMI_I LTR Pao 6762 7001 -962 7 587 12659 128 46 10 chrUextra 369864 372190 -28632466 - BATUMI_I LTR Pao -1063 6851 4386 7 587 327 85 0 0 chrUextra 372303 372350 -28632306 + (TA)n Simple_repeat Simple_repeat 2 48 0 7 587 2397 32 0 34 chrUextra 374800 375123 -28629533 - TAHRE LINE telomeric -10132 331 20 7 587 267 93 0 0 chrUextra 375100 375143 -28629513 - TAHRE LINE telomeric 0 10463 10421 7 587 11512 68 16 17 chrUextra 375164 377190 -28627466 - TAHRE LINE telomeric -9 10454 7623 7 587 2214 137 24 16 chrUextra 377302 377681 -28626975 - DM412B_LTR LTR Gypsy -189 382 1 7 587 259 59 0 0 chrUextra 377681 377714 -28626942 - G5A_DM LINE Jockey -421 2420 2388 7 587 4156 104 56 0 chrUextra 377714 378318 -28626338 + BS2 LINE Jockey 454 1091 -3630 7 587 1049 265 96 20 chrUextra 378300 378643 -28626013 + BS2 LINE Jockey 2642 3010 -1711 7 587 1744 52 24 0 chrUextra 378644 378856 -28625800 + BS3_DM LINE Jockey 390 606 -1184 7 587 2911 61 3 0 chrUextra 378855 379215 -28625441 + BS3_DM LINE Jockey 797 1157 -633 7 587 662 69 0 0 chrUextra 379214 379301 -28625355 + BS3_DM LINE Jockey 1704 1790 0 7 587 1374 206 133 0 chrUextra 379300 379645 -28625011 + GTWIN_I LTR Gypsy 4050 4440 -1981 7 587 8611 107 98 86 chrUextra 379746 382097 -28622559 + TART LINE telomeric 8950 10666 -3811 7 587 3369 85 2 0 chrUextra 382197 382658 -28621998 - I_DM LINE I -2337 3894 3433 7 587 13228 66 6 7 chrUextra 382667 384490 -28620166 - I_DM LINE I -2995 3236 1415 7 587 7867 24 22 0 chrUextra 384590 385504 -28619152 - DM1731_I LTR Copia -3042 934 1 7 587 2392 35 69 0 chrUextra 385504 385794 -28618862 - DM1731_LTR LTR Copia 0 336 27 7 587 9540 24 23 0 chrUextra 385787 386881 -28617775 + DMCR1A LINE CR1 1039 2157 -2313 7 587 2152 4 0 0 chrUextra 386981 387213 -28617443 + Gypsy4_I LTR Gypsy 6057 6288 0 7 587 2561 18 3 0 chrUextra 387213 387499 -28617157 + Gypsy4_LTR LTR Gypsy 1 287 0 7 587 7797 75 60 21 chrUextra 387507 388724 -28615932 - DM297_I LTR Gypsy -4884 1283 20 7 587 2466 92 39 8 chrUextra 388730 389114 -28615542 - DM297_LTR LTR Gypsy -18 396 1 7 587 505 122 0 0 chrUextra 389163 389237 -28615419 - FW_DM LINE Jockey -3176 1516 1443 7 587 2141 4 0 0 chrUextra 389337 389570 -28615086 + ACCORD_LTR LTR Gypsy 326 558 0 7 587 559 90 45 0 chrUextra 389570 389713 -28614943 - TC1_DM DNA Tc1 -1470 196 1 7 587 22 0 0 0 chrUextra 391143 391165 -28613491 + AT_rich Low_complexity Low_complexity 1 22 0 7 587 4039 13 0 0 chrUextra 391671 392121 -28612535 - R1_DM LINE R1 -1609 3747 3298 7 587 2186 31 0 0 chrUextra 392119 392376 -28612280 - R1_DM LINE R1 -2425 2931 2675 7 73 8772 60 27 6 chrUextra 392374 393520 -28611136 - R1_DM LINE R1 -4186 1170 1 7 588 2357 12 0 0 chrUextra 393553 393809 -28610847 - R1_DM LINE R1 0 5356 5101 7 588 11338 36 29 2 chrUextra 393909 395259 -28609397 + DMCR1A LINE CR1 863 2248 -2222 7 588 6675 29 10 1 chrUextra 395265 396038 -28608618 + DMCR1A LINE CR1 2555 3334 -1136 7 588 6919 13 0 0 chrUextra 396138 396903 -28607753 - FW_DM LINE Jockey -3927 765 1 7 588 5884 56 61 1 chrUextra 396920 397724 -28606932 + DOC5_DM LINE Jockey 1823 2674 -2008 7 588 3142 70 80 70 chrUextra 397727 398266 -28606390 + DOC5_DM LINE Jockey 2977 3520 -1162 7 588 260 162 54 108 chrUextra 398369 398480 -28606176 + Stalker2_I LTR Gypsy 799 903 -6499 7 588 23 0 0 0 chrUextra 398594 398617 -28606039 + AT_rich Low_complexity Low_complexity 1 23 0 7 588 1480 311 62 59 chrUextra 398691 400463 -28604193 + MDG1_I LTR Gypsy 1456 3191 -3422 7 588 213 65 0 0 chrUextra 401129 401160 -28603496 + (TA)n Simple_repeat Simple_repeat 1 31 0 7 588 23 0 0 0 chrUextra 402928 402951 -28601705 + AT_rich Low_complexity Low_complexity 1 23 0 7 588 197 119 24 0 chrUextra 403485 403527 -28601129 + (TA)n Simple_repeat Simple_repeat 1 43 0 7 588 11849 54 9 7 chrUextra 405558 407023 -28597633 + DMCR1A LINE CR1 2455 3922 -548 7 588 1495 44 0 0 chrUextra 407125 407308 -28597348 - Baggins1 LINE LOA -4570 883 701 7 588 3381 204 14 56 chrUextra 407308 408134 -28596522 + Gypsy12_LTR LTR Gypsy 1 792 -1544 7 588 4148 162 112 56 chrUextra 408106 409197 -28595459 + Gypsy12_LTR LTR Gypsy 1084 2235 -101 7 588 257 179 11 116 chrUextra 409552 409647 -28595009 + ROO_I LTR Pao 645 729 -7527 7 588 192 97 0 0 chrUextra 410889 410920 -28593736 + (ATTCG)n Simple_repeat Simple_repeat 4 34 0 7 588 21 0 0 0 chrUextra 411339 411360 -28593296 + AT_rich Low_complexity Low_complexity 1 21 0 7 588 354 23 0 0 chrUextra 411477 411520 -28593136 + (A)n Simple_repeat Simple_repeat 1 43 0 7 588 2105 276 15 8 chrUextra 411521 412269 -28592387 + Copia_I LTR Copia 1527 2279 -2314 7 588 2086 296 26 20 chrUextra 412505 413527 -28591129 + Copia_I LTR Copia 2720 3748 -845 7 588 8806 18 11 1 chrUextra 413627 414649 -28590007 + ROO_I LTR Pao 5662 6693 -1563 7 588 9060 18 3 1 chrUextra 414648 415681 -28588975 + ROO_I LTR Pao 6872 7906 -350 7 588 374 221 11 98 chrUextra 415786 416017 -28588639 - Gypsy_LTR LTR Gypsy -267 215 29 7 588 257 158 397 30 chrUextra 416095 416226 -28588430 - Invader3_I LTR Gypsy -3189 1699 1521 7 588 1454 88 0 15 chrUextra 416181 416378 -28588278 + PROTOP_B DNA P 960 1153 0 7 588 700 99 150 18 chrUextra 416439 416552 -28588104 - DNAREP1_DM LINE Penelope -140 454 327 7 588 418 193 0 12 chrUextra 416560 416644 -28588012 + DNAREP1_DM LINE Penelope 117 199 -395 7 588 636 178 96 17 chrUextra 416644 416821 -28587835 - DNAREP1_DM LINE Penelope -270 324 134 7 588 3739 175 100 18 chrUextra 416827 417732 -28586924 - Invader3_I LTR Gypsy -3231 1657 679 7 588 243 203 0 33 chrUextra 417728 417789 -28586867 + DMCR1A LINE CR1 4411 4469 -1 7 588 5356 43 15 21 chrUextra 417913 418576 -28586080 - Baggins1 LINE LOA -3 5450 4792 7 588 8034 87 44 7 chrUextra 418725 419829 -28584827 - R1_DM LINE R1 -3113 2243 1099 7 588 345 168 0 221 chrUextra 419821 419943 -28584713 - R1_DM LINE R1 -4676 680 586 7 588 3178 122 50 20 chrUextra 420360 420905 -28583751 - QUASIMODO_LTR LTR Gypsy -55 603 43 7 588 9474 40 17 0 chrUextra 420896 422023 -28582633 - DMRT1B LINE R1 0 5183 4038 7 588 15377 33 12 7 chrUextra 422253 424100 -28580556 + DMRT1B LINE R1 1 1819 -3364 7 588 9107 106 12 14 chrUextra 426277 428244 -28576412 - Gypsy10_I LTR Gypsy -3014 2264 400 7 588 2645 32 3 9 chrUextra 428344 428690 -28575966 - Invader2_I LTR Gypsy -4247 345 2 7 588 1648 87 17 0 chrUextra 428691 428922 -28575734 - Invader2_LTR LTR Gypsy 0 266 32 7 588 462 257 171 0 chrUextra 429170 429310 -28575346 - DOC3_DM LINE Jockey -3213 1527 1364 7 588 314 198 53 32 chrUextra 429346 429440 -28575216 - DMCR1A LINE CR1 -3999 471 376 7 588 1674 188 337 23 chrUextra 429452 430067 -28574589 - DMRT1A LINE R1 -614 4569 3762 7 588 12098 144 5 1 chrUextra 430363 432271 -28572385 + HETA LINE telomeric 1273 3188 -2893 7 588 8202 30 16 0 chrUextra 432371 433326 -28571330 - DMRT1B LINE R1 -2987 2196 1227 7 588 8203 30 7 0 chrUextra 433322 434278 -28570378 - DMRT1B LINE R1 -4066 1117 155 7 588 16627 23 6 0 chrUextra 434379 436280 -28568376 - FW_DM LINE Jockey -2588 2104 192 7 588 15356 1 0 0 chrUextra 436380 438013 -28566643 - Gypsy3_I LTR Gypsy -4544 1633 1 7 588 2454 8 0 0 chrUextra 438013 438280 -28566376 - Gypsy3_LTR LTR Gypsy 0 398 132 7 588 7367 170 26 94 chrUextra 438380 440242 -28564414 + HETA LINE telomeric 75 1809 -4272 7 588 5793 297 16 12 chrUextra 440367 442217 -28562439 - NOMAD_I LTR Gypsy -2131 4441 2586 7 588 803 176 26 20 chrUextra 442346 442497 -28562159 + HETRP_DM Satellite Satellite 1518 1669 -203 7 588 3634 128 102 23 chrUextra 442509 444125 -28560531 - HOBO DNA hAT 0 3016 1104 7 588 251 81 0 0 chrUextra 444134 444171 -28560485 - HOBO DNA hAT -2070 946 910 7 588 327 328 16 10 chrUextra 444521 444715 -28559941 + BLASTOPIA_I LTR Gypsy 3541 3735 -746 7 588 213 39 0 0 chrUextra 445765 445791 -28558865 + (CAAAT)n Simple_repeat Simple_repeat 3 28 0 7 588 1802 74 222 0 chrUextra 445800 446111 -28558545 + DMCR1A LINE CR1 3375 3754 -716 7 588 778 77 0 0 chrUextra 446219 446323 -28558333 + G5A_DM LINE Jockey 1412 1515 -1326 7 588 5418 64 96 14 chrUextra 446323 447239 -28557417 + G5A_DM LINE Jockey 1624 2614 -227 7 588 261 100 0 0 chrUextra 447235 447275 -28557381 + G5A_DM LINE Jockey 2794 2833 -8 7 588 409 305 22 19 chrUextra 447525 447846 -28556810 - TV1I LTR Gypsy -1051 4912 4591 7 588 15284 21 1 4 chrUextra 448164 450006 -28554650 - Gypsy12_I LTR Gypsy -2650 2896 1062 7 588 286 308 19 19 chrUextra 450278 450440 -28554216 + MDG3_I LTR Gypsy 3263 3424 -1562 7 588 284 339 16 10 chrUextra 450760 450954 -28553702 + BLASTOPIA_I LTR Gypsy 3541 3735 -746 7 588 1984 21 14 3 chrUextra 452039 452330 -28552326 + STALKER4_I LTR Gypsy 6185 6478 -52 7 588 2656 22 3 0 chrUextra 452353 452677 -28551979 + STALKER4_LTR LTR Gypsy 1 325 -77 7 588 2636 26 75 0 chrUextra 452677 452825 -28551831 - Stalker3_LTR LTR Gypsy 0 372 225 7 588 207 0 0 0 chrUextra 452825 452848 -28551808 + (CTTAT)n Simple_repeat Simple_repeat 2 24 0 7 588 2636 26 75 0 chrUextra 452848 453045 -28551611 - Stalker3_LTR LTR Gypsy -148 224 2 7 588 337 44 0 12 chrUextra 453045 453113 -28551543 - STALKER4_I LTR Gypsy 0 6530 6491 7 588 216 212 22 45 chrUextra 453118 453207 -28551449 + T-rich Low_complexity Low_complexity 6 92 0 7 588 691 279 16 28 chrUextra 453482 453869 -28550787 - Gypsy11_I LTR Gypsy -137 3387 3006 7 588 266 189 0 0 chrUextra 453975 454028 -28550628 + DMRT1A LINE R1 2553 2605 -2578 7 588 10144 36 29 1 chrUextra 454041 455328 -28549328 + DMCR1A LINE CR1 48 1370 -3100 7 588 2852 71 9 11 chrUextra 455356 455798 -28548858 - I_DM LINE I -4035 2196 1756 7 588 12721 54 15 23 chrUextra 455898 457703 -28546953 + Gypsy7_I LTR Gypsy 3090 4879 -105 7 588 9262 157 15 17 chrUextra 457827 459652 -28545004 - HETA LINE telomeric -1824 4257 2437 7 588 358 182 13 0 chrUextra 459753 459830 -28544826 - DNAREP1_DM LINE Penelope -493 101 24 7 588 1263 166 147 8 chrUextra 460209 460610 -28544046 - Gypsy12A_LTR LTR Gypsy -1 2335 1812 7 588 5740 52 118 0 chrUextra 460717 461558 -28543098 - BS3_DM LINE Jockey 0 1790 851 7 588 14105 30 30 1 chrUextra 461671 463460 -28541196 - DMRT1B LINE R1 -3180 2003 163 7 588 180 0 0 0 chrUextra 463460 463480 -28541176 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 7 588 1592 87 31 12 chrUextra 463614 463870 -28540786 - ROVER-LTR_DM LTR Gypsy -106 261 1 7 588 2303 167 58 9 chrUextra 463870 464437 -28540219 - ROVER-I_DM LTR Gypsy 0 6584 5990 7 588 2795 170 108 2 chrUextra 464472 465402 -28539254 - ROVER-I_DM LTR Gypsy -1276 5308 4281 7 588 4956 64 105 12 chrUextra 465502 466368 -28538288 - DMCR1A LINE CR1 -2487 1983 1037 7 588 5808 67 11 4 chrUextra 466452 467311 -28537345 + DMCR1A LINE CR1 7 1119 -3351 7 588 26 0 0 0 chrUextra 469140 469166 -28535490 + AT_rich Low_complexity Low_complexity 1 26 0 7 588 22 0 0 0 chrUextra 469307 469329 -28535327 + AT_rich Low_complexity Low_complexity 1 22 0 7 588 677 296 16 61 chrUextra 469419 469732 -28534924 - TIRANT_I LTR Gypsy -6343 1349 1051 7 588 386 237 47 82 chrUextra 470087 470257 -28534399 - TIRANT_I LTR Gypsy -7528 164 1 7 588 826 167 86 125 chrUextra 470372 470708 -28533948 - TIRANT_LTR LTR Gypsy -94 323 1 7 588 2874 36 3 0 chrUextra 470708 471100 -28533556 - Invader2_I LTR Gypsy -4176 416 24 7 588 3737 63 20 0 chrUextra 471200 471708 -28532948 - G5_DM LINE Jockey -1466 3390 2873 7 588 625 212 34 0 chrUextra 471714 471860 -28532796 - DMCR1A LINE CR1 -2523 1947 1797 7 588 1171 112 20 0 chrUextra 472004 472200 -28532456 + DOC LINE Jockey 558 757 -3968 7 588 2421 52 28 0 chrUextra 472199 472523 -28532133 - G5_DM LINE Jockey -79 4777 4445 7 588 2573 114 43 13 chrUextra 472515 472977 -28531679 + DOC LINE Jockey 571 1046 -3679 7 588 2776 20 0 3 chrUextra 473088 473613 -28531043 + MDG3_I LTR Gypsy 4397 4986 0 7 588 2004 26 3 57 chrUextra 473613 473895 -28530761 + MDG3_LTR LTR Gypsy 1 267 0 7 588 311 109 91 30 chrUextra 473895 473951 -28530705 + TART LINE telomeric 3139 3198 -11279 7 588 371 108 0 30 chrUextra 474999 475057 -28529599 - DMTOM1_LTR LTR Gypsy -6 404 349 7 588 493 148 38 83 chrUextra 475057 475190 -28529466 - DMTOM1_LTR LTR Gypsy 0 410 284 7 588 242 207 17 0 chrUextra 475207 475265 -28529391 - DM176_LTR LTR Gypsy -141 366 308 7 588 248 133 22 0 chrUextra 475383 475428 -28529228 - DM176_LTR LTR Gypsy -238 269 224 7 588 21 0 0 0 chrUextra 475533 475554 -28529102 + AT_rich Low_complexity Low_complexity 1 21 0 7 588 557 73 0 92 chrUextra 475566 475686 -28528970 - DMCR1A LINE CR1 -102 4368 4260 7 588 1464 43 0 0 chrUextra 475996 476184 -28528472 - DMCR1A LINE CR1 -205 4265 4078 7 588 4668 35 0 0 chrUextra 476181 476754 -28527902 - DMCR1A LINE CR1 -357 4113 3541 7 588 22 35 0 0 chrUextra 477661 477690 -28526966 + AT_rich Low_complexity Low_complexity 1 29 0 7 588 2010 149 9 0 chrUextra 478023 478373 -28526283 - DMCR1A LINE CR1 -836 3634 3282 7 588 1084 87 6 12 chrUextra 478388 478549 -28526107 - DMCR1A LINE CR1 -1239 3231 3072 7 588 511 104 13 0 chrUextra 478549 478626 -28526030 + DNAREP1_DM LINE Penelope 2 79 -515 7 588 370 262 97 16 chrUextra 478910 479096 -28525560 - QUASIMODO_I LTR Gypsy -4388 1672 1472 7 588 227 139 0 0 chrUextra 479182 479225 -28525431 - QUASIMODO_I LTR Gypsy -4694 1366 1324 7 588 873 314 20 20 chrUextra 479282 479773 -28524883 - TV1I LTR Gypsy -5044 919 429 7 588 30 0 0 0 chrUextra 479820 479850 -28524806 + AT_rich Low_complexity Low_complexity 1 30 0 7 588 928 167 112 25 chrUextra 480263 480503 -28524153 - QUASIMODO_LTR LTR Gypsy -69 589 329 7 588 2797 24 0 0 chrUextra 480603 480934 -28523722 - R2_DM LINE R2 -1345 2262 1932 7 588 5715 54 12 1 chrUextra 480956 481710 -28522946 - R1_DM LINE R1 -69 5287 4526 7 588 2518 180 7 48 chrUextra 481710 482293 -28522363 + Gypsy12_LTR LTR Gypsy 1 559 -1777 7 588 2604 101 90 37 chrUextra 482480 483046 -28521610 - BATUMI_I LTR Pao -7335 628 33 7 588 2131 21 7 28 chrUextra 483052 483342 -28521314 - BATUMI_I LTR Pao -679 7284 7001 7 588 667 12 12 0 chrUextra 483341 483427 -28521229 + PROTOP DNA P 2043 2129 -2351 7 588 1051 88 69 0 chrUextra 483428 483588 -28521068 - Gypsy9_LTR LTR Gypsy -165 171 1 7 588 26 0 0 0 chrUextra 483597 483623 -28521033 + AT_rich Low_complexity Low_complexity 1 26 0 7 588 213 65 0 0 chrUextra 483623 483654 -28521002 + (T)n Simple_repeat Simple_repeat 1 31 0 7 588 27 0 0 0 chrUextra 483655 483682 -28520974 + AT_rich Low_complexity Low_complexity 1 27 0 7 588 25 0 0 0 chrUextra 483776 483801 -28520855 + AT_rich Low_complexity Low_complexity 1 25 0 7 588 470 123 0 0 chrUextra 484160 484241 -28520415 + MICROPIA_LTR LTR Gypsy 233 313 -163 7 588 3821 25 16 8 chrUextra 484349 484833 -28519823 - PROTOP DNA P -3945 535 48 7 588 935 124 200 16 chrUextra 484844 485089 -28519567 + Gypsy12A_LTR LTR Gypsy 811 1100 -1180 7 588 3945 146 48 82 chrUextra 485089 486064 -28518592 + Gypsy12A_LTR LTR Gypsy 1336 2277 -3 7 588 3469 199 39 19 chrUextra 486227 487956 -28516700 - SAR_DM Satellite Satellite -396 1763 1 7 588 5007 242 20 30 chrUextra 488058 489665 -28514991 + TABOR_I LTR Gypsy 4368 5958 -378 7 588 4366 8 0 0 chrUextra 489907 490422 -28514234 + Copia2_I LTR Copia 3648 4162 0 7 588 1530 5 21 0 chrUextra 490458 490644 -28514012 + Copia2_LTR_DM LTR Copia 9 198 0 7 588 35 24 0 0 chrUextra 490646 490688 -28513968 + AT_rich Low_complexity Low_complexity 1 42 0 7 588 26 0 0 0 chrUextra 490806 490832 -28513824 + AT_rich Low_complexity Low_complexity 1 26 0 7 588 245 125 46 15 chrUextra 491146 491211 -28513445 + (TAA)n Simple_repeat Simple_repeat 2 68 0 7 588 35 63 0 0 chrUextra 492143 492206 -28512450 + AT_rich Low_complexity Low_complexity 1 63 0 7 588 23 68 0 0 chrUextra 492584 492628 -28512028 + AT_rich Low_complexity Low_complexity 1 44 0 7 588 1045 135 69 171 chrUextra 493084 493384 -28511272 + HOBO DNA hAT 44 312 -2704 7 588 453 162 98 9 chrUextra 493384 493496 -28511160 + PROTOP_B DNA P 1 122 -1031 7 588 2701 184 12 2 chrUextra 493598 494111 -28510545 - Invader3_I LTR Gypsy -3692 1196 679 7 588 226 203 0 33 chrUextra 494107 494168 -28510488 + DMCR1A LINE CR1 4411 4469 -1 7 588 7101 190 34 27 chrUextra 495440 497179 -28507477 - HETA LINE telomeric -1633 4448 2723 7 588 2802 143 77 0 chrUextra 497279 497797 -28506859 + DMRT1B LINE R1 593 1150 -4033 7 588 1762 140 14 0 chrUextra 497833 498126 -28506530 + DMRT1B LINE R1 1955 2251 -2932 7 588 2291 146 64 2 chrUextra 498122 498542 -28506114 + DMRT1B LINE R1 2460 2905 -2278 7 588 2791 160 6 2 chrUextra 498529 499012 -28505644 + DMRT1B LINE R1 3101 3585 -1598 7 588 4320 177 14 0 chrUextra 499112 499958 -28504698 - HETA LINE telomeric -4094 1987 1130 7 588 3346 190 18 43 chrUextra 500001 500844 -28503812 - TAHRE LINE telomeric -9562 901 80 7 588 12358 36 50 8 chrUextra 500944 502672 -28501984 - DMCR1A LINE CR1 -1464 3006 1205 7 588 3955 48 69 10 chrUextra 502774 503401 -28501255 - DM297_I LTR Gypsy -201 5966 5303 7 588 6436 64 70 1 chrUextra 503395 504377 -28500279 - DM297_I LTR Gypsy -1175 4992 3943 7 588 844 58 41 0 chrUextra 504376 504497 -28500159 + IVK_DM LINE I 4915 5040 -362 7 588 4047 26 0 2 chrUextra 504599 505104 -28499552 - DMCR1A LINE CR1 -3919 551 48 7 588 2328 231 85 5 chrUextra 505117 506318 -28498338 - DMRT1A LINE R1 -2578 2605 1283 7 588 1822 31 253 0 chrUextra 506422 506915 -28497741 + Baggins1 LINE LOA 3470 4086 -1367 7 588 7356 30 36 0 chrUextra 506909 507846 -28496810 + Baggins1 LINE LOA 4483 5453 0 7 588 4415 52 2 29 chrUextra 508245 508877 -28495779 - Gypsy7_I LTR Gypsy -4369 615 1 7 588 1526 88 0 49 chrUextra 508877 509141 -28495515 - Gypsy7_LTR LTR Gypsy 0 251 1 7 588 735 75 0 28 chrUextra 509141 509250 -28495406 - Gypsy7_I LTR Gypsy 0 4984 4879 7 588 3803 77 3 46 chrUextra 509350 509964 -28494692 - Gypsy7_I LTR Gypsy -94 4890 4303 7 588 6059 15 77 0 chrUextra 510066 511040 -28493616 - DMRT1B LINE R1 -2689 2494 1446 7 588 275 186 34 0 chrUextra 511146 511202 -28493454 - STALKER4_LTR LTR Gypsy -23 379 322 7 588 2670 34 63 0 chrUextra 511202 511403 -28493253 + Stalker3_LTR LTR Gypsy 1 201 -171 7 588 207 0 0 0 chrUextra 511403 511426 -28493230 + (ATAAG)n Simple_repeat Simple_repeat 2 24 0 7 588 2670 34 63 0 chrUextra 511426 511574 -28493082 + Stalker3_LTR LTR Gypsy 202 370 -2 7 588 291 49 0 0 chrUextra 511574 511615 -28493041 + Stalker2_I LTR Gypsy 1 41 -7361 7 588 4629 71 14 12 chrUextra 511886 512554 -28492102 - TRANSIB4 DNA Transib -102 2508 1840 7 588 7205 66 46 4 chrUextra 512552 513603 -28491053 - TRANSIB4 DNA Transib -1404 1206 112 7 588 13980 15 16 4 chrUextra 513703 515417 -28489239 + DOC2_DM LINE Jockey 896 2629 -2164 7 588 6562 53 65 7 chrUextra 515517 517138 -28487518 + DMCR1A LINE CR1 2688 4401 -69 7 588 4799 24 7 5 chrUextra 517330 517928 -28486728 + CIRCE LINE Composite 3126 3724 -2632 7 588 2101 32 0 4 chrUextra 517924 518205 -28486451 + CIRCE LINE Composite 4391 4670 -1686 7 588 6684 16 25 1 chrUextra 518204 519042 -28485614 - STALKER4_I LTR Gypsy -2365 4165 3308 7 588 5948 77 68 11 chrUextra 520954 522455 -28482201 - DMCR1A LINE CR1 -2629 1841 7 7 588 235 146 0 0 chrUextra 522522 522563 -28482093 + DMCR1A LINE CR1 744 784 -3686 7 588 46 0 0 0 chrUextra 522765 522811 -28481845 + AT_rich Low_complexity Low_complexity 1 46 0 7 588 3041 126 18 18 chrUextra 522845 523396 -28481260 + DOC LINE Jockey 4147 4697 -28 7 588 414 37 0 0 chrUextra 523414 523468 -28481188 - DNAREP1_DM LINE Penelope -360 234 181 7 588 306 53 0 0 chrUextra 523517 523555 -28481101 + DNAREP1_DM LINE Penelope 445 482 -112 7 73 6976 41 12 0 chrUextra 523560 524444 -28480212 + DMCR1A LINE CR1 1547 2441 -2029 7 589 13320 32 49 1 chrUextra 524572 526278 -28478378 + Gypsy4_I LTR Gypsy 2453 4241 -2047 7 589 4412 61 25 6 chrUextra 526379 527020 -28477636 - TRANSIB4 DNA Transib -1957 653 1 7 589 381 193 0 11 chrUextra 527020 527108 -28477548 + DNAREP1_DM LINE Penelope 159 245 -349 7 589 1043 203 40 57 chrUextra 527108 527479 -28477177 - Gypsy_LTR LTR Gypsy -117 365 1 7 589 312 211 0 0 chrUextra 527482 527558 -28477098 - Gypsy_I LTR Gypsy -3 6504 6429 7 589 538 167 86 16 chrUextra 527591 527719 -28476937 + DNAREP1_DM LINE Penelope 432 568 -26 7 589 682 123 21 14 chrUextra 527931 528071 -28476585 - DNAREP1_DM LINE Penelope -262 332 192 7 589 10738 76 33 19 chrUextra 528182 529866 -28474790 - TART LINE telomeric -3842 10635 8928 7 589 451 65 182 0 chrUextra 529966 530043 -28474613 + DMRT1C LINE R1 5351 5441 -2 7 589 27 29 0 0 chrUextra 531755 531789 -28472867 + AT_rich Low_complexity Low_complexity 1 34 0 7 589 21 36 0 0 chrUextra 532727 532755 -28471901 + AT_rich Low_complexity Low_complexity 1 28 0 7 589 4831 10 0 0 chrUextra 533511 534132 -28470524 - DM297_I LTR Gypsy -216 5951 5331 7 589 2570 9 0 6 chrUextra 534115 534440 -28470216 - DM297_I LTR Gypsy -1953 4214 3892 7 589 5828 5 52 0 chrUextra 534428 535172 -28469484 - DM297_I LTR Gypsy -2378 3789 3007 7 589 5406 32 6 4 chrUextra 535272 535952 -28468704 + DMRT1B LINE R1 4503 5183 0 7 589 226 0 0 0 chrUextra 535984 536010 -28468646 + STALKER4_LTR LTR Gypsy 1 26 -376 7 589 266 45 0 62 chrUextra 536008 536056 -28468600 + BATUMI_I LTR Pao 7001 7045 -918 7 589 5038 54 53 28 chrUextra 536053 536886 -28467770 + BATUMI_I LTR Pao 100 953 -7010 7 589 32 26 0 0 chrUextra 536886 536925 -28467731 + AT_rich Low_complexity Low_complexity 1 39 0 7 589 273 296 88 12 chrUextra 537907 538078 -28466578 + BS LINE Jockey 2093 2276 -2850 7 589 306 236 79 0 chrUextra 538076 538165 -28466491 + BS LINE Jockey 2638 2733 -2393 7 589 524 143 231 8 chrUextra 539284 539418 -28465238 + Transib-N1_DM DNA Transib 351 514 0 7 589 14458 0 0 1 chrUextra 540546 542199 -28462457 - MAX_I LTR Pao -1417 6497 4846 7 589 338 176 104 38 chrUextra 542302 542408 -28462248 - MDG1_I LTR Gypsy -6483 113 1 7 589 1867 94 74 3 chrUextra 542408 542706 -28461950 - MDG1_LTR LTR Gypsy -30 412 94 7 589 372 88 0 0 chrUextra 542708 542765 -28461891 + (TTA)n Simple_repeat Simple_repeat 3 59 0 7 589 2370 41 3 28 chrUextra 543232 543557 -28461099 + NINJA_LTR LTR Pao 1 317 0 7 589 2363 38 53 64 chrUextra 543557 543950 -28460706 + NINJA_I LTR Pao 1 389 -5622 7 589 4808 247 25 24 chrUextra 544051 545582 -28459074 - TOM_I LTR Gypsy -3251 2861 1328 7 589 5047 189 3 6 chrUextra 545797 546802 -28457854 + ROVER-I_DM LTR Gypsy 3757 4758 -1826 7 589 1418 177 87 0 chrUextra 546806 547140 -28457516 + ROVER-I_DM LTR Gypsy 4946 5308 -1276 7 589 1006 193 121 24 chrUextra 547142 547439 -28457217 + ROVER-I_DM LTR Gypsy 5892 6217 -367 7 589 3300 39 99 0 chrUextra 547546 548182 -28456474 + DOC3_DM LINE Jockey 3798 4496 -244 7 589 731 45 9 0 chrUextra 548179 548289 -28456367 + DOC3_DM LINE Jockey 4630 4740 0 7 589 322 295 0 0 chrUextra 548290 548402 -28456254 + BS2 LINE Jockey 2773 2884 -1837 7 589 5630 66 9 7 chrUextra 548409 549176 -28455480 + BS3_DM LINE Jockey 235 1003 -787 7 589 317 161 32 21 chrUextra 549345 549440 -28455216 - HMSBEAGLE_I LTR Gypsy -5817 712 617 7 589 733 123 240 0 chrUextra 549466 549637 -28455019 - HMSBEAGLE_I LTR Gypsy -6314 215 4 7 589 1102 126 78 18 chrUextra 549638 549856 -28454800 - DMLTR5 LTR Gypsy -1 265 35 7 589 262 85 128 0 chrUextra 549998 550033 -28454623 - PROTOP_B DNA P -7 1146 1106 7 589 605 119 8 25 chrUextra 550033 550154 -28454502 + M4DM DNA Transib 1 119 -1316 7 589 423 61 0 83 chrUextra 550153 550225 -28454431 + M4DM DNA Transib 304 369 -1066 7 589 3391 99 7 21 chrUextra 550348 550905 -28453751 + M4DM DNA Transib 406 954 -481 7 589 3401 221 16 7 chrUextra 551007 551864 -28452792 - TABOR_I LTR Gypsy -1435 4901 4037 7 589 1846 236 56 15 chrUextra 551867 552580 -28452076 - STALKER4_I LTR Gypsy -2671 3859 3118 7 589 840 254 18 111 chrUextra 552735 553178 -28451478 - Invader3_I LTR Gypsy -1744 3144 2743 7 589 5437 53 1 0 chrUextra 554464 555181 -28449475 + IVK_DM LINE I 2130 2847 -2555 7 589 772 21 0 0 chrUextra 555180 555274 -28449382 + IVK_DM LINE I 3750 3843 -1559 7 589 1323 90 0 0 chrUextra 555273 555461 -28449195 + IVK_DM LINE I 3972 4159 -1243 7 589 4126 47 36 58 chrUextra 555456 556072 -28448584 - Gypsy3_I LTR Gypsy -5246 931 330 7 589 1877 36 0 0 chrUextra 556172 556392 -28448264 - FW_DM LINE Jockey -4469 223 4 7 589 745 188 78 58 chrUextra 556409 556652 -28448004 - STALKER4_I LTR Gypsy -5398 1132 885 7 589 740 112 24 8 chrUextra 556998 557124 -28447532 - STALKER4_I LTR Gypsy -5645 885 758 7 589 358 162 112 0 chrUextra 557439 557519 -28447137 - DNAREP1_DM LINE Penelope -439 155 67 7 589 210 37 0 0 chrUextra 557667 557694 -28446962 + (GA)n Simple_repeat Simple_repeat 2 28 0 7 589 361 214 0 23 chrUextra 557694 557780 -28446876 + HETRP_DM Satellite Satellite 1549 1632 -240 7 589 5032 9 2 2 chrUextra 557880 558432 -28446224 + SSU-rRNA_Dme rRNA rRNA 1274 1825 -170 7 589 1890 35 53 0 chrUextra 558448 558674 -28445982 + Gypsy6_LTR LTR Gypsy 170 407 0 7 589 1932 23 44 116 chrUextra 558674 558967 -28445689 + Gypsy6_I LTR Gypsy 1 272 -6740 7 589 4667 8 0 0 chrUextra 558970 559475 -28445181 + Gypsy6_I LTR Gypsy 3058 3562 -3450 7 589 23 0 0 0 chrUextra 559579 559602 -28445054 + AT_rich Low_complexity Low_complexity 1 23 0 7 589 287 70 0 23 chrUextra 560255 560299 -28444357 + DNAREP1_DM LINE Penelope 188 230 -364 7 589 1002 84 300 9 chrUextra 560326 560536 -28444120 + DNAREP1_DM LINE Penelope 197 467 -127 7 589 402 227 10 93 chrUextra 560565 560811 -28443845 - Gypsy_LTR LTR Gypsy -252 230 29 7 589 262 147 419 29 chrUextra 560889 560994 -28443662 - Invader3_I LTR Gypsy -3189 1699 1554 7 589 1408 98 0 15 chrUextra 560975 561172 -28443484 + PROTOP_B DNA P 960 1153 0 7 589 2167 8 0 0 chrUextra 561277 561512 -28443144 + Invader1_LTR LTR Gypsy 189 423 0 7 589 1549 6 0 0 chrUextra 561512 561682 -28442974 + Copia2_LTR_DM LTR Copia 29 198 0 7 589 229 155 51 17 chrUextra 561814 561873 -28442783 + (TA)n Simple_repeat Simple_repeat 1 61 0 7 589 3291 10 90 0 chrUextra 562458 562846 -28441810 + Invader1_LTR LTR Gypsy 1 423 0 7 589 12436 53 4 5 chrUextra 562970 564554 -28440102 + HETA LINE telomeric 2786 4368 -1713 7 589 9111 17 53 0 chrUextra 564655 565898 -28438758 + NINJA_I LTR Pao 3413 4721 -1290 7 589 2614 22 127 0 chrUextra 565901 566217 -28438439 + Baggins1 LINE LOA 5083 5438 -15 7 589 1226 0 0 0 chrUextra 568023 568158 -28436498 - ACCORD_LTR LTR Gypsy -423 135 1 7 589 9412 10 30 0 chrUextra 568158 569601 -28435055 - ACCORD_I LTR Gypsy -2585 3703 2600 7 589 12968 16 2 22 chrUextra 569701 571274 -28433382 - BATUMI_I LTR Pao -5970 1993 452 7 589 12881 33 71 5 chrUextra 571375 572944 -28431712 - BATUMI_I LTR Pao -1903 6060 4389 7 589 434 69 0 0 chrUextra 573347 573405 -28431251 - DNAREP1_DM LINE Penelope -9 585 528 7 589 677 143 0 50 chrUextra 573405 573545 -28431111 - DNAREP1_DM LINE Penelope -263 331 199 7 589 371 129 67 56 chrUextra 573543 573633 -28431023 - DNAREP1_DM LINE Penelope -312 282 192 7 589 1211 97 44 17 chrUextra 573615 573865 -28430791 - DNAREP1_DM LINE Penelope -295 299 1 7 589 26 0 0 0 chrUextra 573927 573953 -28430703 + AT_rich Low_complexity Low_complexity 1 26 0 7 589 2367 157 68 57 chrUextra 573998 574539 -28430117 - HOBO DNA hAT -42 2974 2428 7 589 26 64 0 0 chrUextra 574558 574605 -28430051 + AT_rich Low_complexity Low_complexity 1 47 0 7 589 21 36 0 0 chrUextra 575290 575318 -28429338 + AT_rich Low_complexity Low_complexity 1 28 0 7 589 29 70 0 0 chrUextra 575386 575443 -28429213 + AT_rich Low_complexity Low_complexity 1 57 0 7 589 26 30 0 0 chrUextra 575483 575516 -28429140 + AT_rich Low_complexity Low_complexity 1 33 0 7 589 3925 50 24 0 chrUextra 575678 576178 -28428478 - PROTOP DNA P -3968 512 1 7 589 2864 96 0 37 chrUextra 576363 576818 -28427838 + S_DM DNA Tc1 1299 1736 0 7 589 1730 31 4 4 chrUextra 576818 577036 -28427620 + CIRCE LINE Composite 4493 4710 -1646 7 589 2652 51 6 6 chrUextra 577034 577367 -28427289 - R1_DM LINE R1 -5009 347 15 7 589 4704 33 2 0 chrUextra 577366 577910 -28426746 - R1_DM LINE R1 -551 4805 4261 7 589 2091 36 90 4 chrUextra 578010 578288 -28426368 - DOC3_DM LINE Jockey -3079 1661 1360 7 589 1551 270 21 19 chrUextra 578284 578770 -28425886 - BS2 LINE Jockey -1937 2784 2298 7 589 3444 66 152 0 chrUextra 578774 579374 -28425282 - BS3_DM LINE Jockey -759 1031 341 7 589 719 62 52 3 chrUextra 579410 579555 -28425101 - DOC3_DM LINE Jockey 0 4740 4452 7 589 11614 41 36 31 chrUextra 579655 581196 -28423460 + BATUMI_I LTR Pao 2313 3861 -4102 7 589 4551 41 70 5 chrUextra 581630 582212 -28422444 + DMCR1A LINE CR1 1082 1701 -2769 7 589 769 68 19 0 chrUextra 582199 582302 -28422354 + DMCR1A LINE CR1 4364 4468 -2 7 589 4099 44 62 0 chrUextra 582305 582833 -28421823 - Transib5 DNA Transib -591 2410 1850 7 589 32 86 0 0 chrUextra 583069 583150 -28421506 + AT_rich Low_complexity Low_complexity 1 81 0 7 589 3152 294 43 24 chrUextra 583276 584462 -28420194 + DMRT1A LINE R1 711 1919 -3264 7 589 3170 13 5 18 chrUextra 584563 584944 -28419712 + FW_DM LINE Jockey 4316 4691 -1 7 589 5435 85 15 6 chrUextra 584931 585754 -28418902 + MDG1_I LTR Gypsy 5454 6666 -231 7 589 193 29 29 29 chrUextra 585754 585789 -28418867 + (TA)n Simple_repeat Simple_repeat 1 35 0 7 589 1684 258 65 39 chrUextra 585789 585928 -28418728 + MDG1_I LTR Gypsy 6667 6799 -98 7 589 1329 25 0 0 chrUextra 585932 586093 -28418563 + (TAA)n Simple_repeat Simple_repeat 3 163 0 7 589 192 245 0 0 chrUextra 586645 586698 -28417958 + (CACCAT)n Simple_repeat Simple_repeat 4 56 0 7 589 1952 14 0 0 chrUextra 587822 588035 -28416621 + R1_DM LINE R1 5144 5356 0 7 589 4708 65 20 3 chrUextra 588068 588671 -28415985 + R1_DM LINE R1 1 613 -4743 7 589 5633 44 12 1 chrUextra 588669 589350 -28415306 + R1_DM LINE R1 1019 1706 -3650 7 589 7845 189 28 7 chrUextra 589451 590966 -28413690 + TAHRE LINE telomeric 621 2168 -8295 7 589 2094 0 0 4 chrUextra 591066 591294 -28413362 + Gypsy4_I LTR Gypsy 6062 6288 0 7 589 2324 45 3 37 chrUextra 591294 591591 -28413065 + Gypsy4_LTR LTR Gypsy 1 287 0 7 589 1295 200 8 0 chrUextra 591814 592064 -28412592 + Gypsy_I LTR Gypsy 5968 6219 -288 7 589 1315 205 48 64 chrUextra 592066 592503 -28412153 + Gypsy_LTR LTR Gypsy 33 462 -20 7 589 1309 62 124 0 chrUextra 592680 592857 -28411799 - MDG1_LTR LTR Gypsy -150 292 94 7 589 372 88 0 0 chrUextra 592859 592916 -28411740 + (TTA)n Simple_repeat Simple_repeat 3 59 0 7 589 915 86 56 21 chrUextra 592944 593087 -28411569 + DM176_I LTR Gypsy 2360 2507 -3913 7 589 6389 105 31 11 chrUextra 593094 594041 -28410615 + DM176_I LTR Gypsy 2641 3606 -2814 7 589 633 172 9 0 chrUextra 594069 594185 -28410471 + DM176_I LTR Gypsy 3704 3820 -2600 7 589 12253 16 12 1 chrUextra 594285 595677 -28408979 - DMRT1B LINE R1 -1873 3310 1903 7 589 519 0 108 0 chrUextra 595678 595789 -28408867 + (GTCTG)n Simple_repeat Simple_repeat 5 127 0 7 589 5274 144 65 27 chrUextra 595889 596617 -28408039 + TART LINE telomeric 4907 5644 -8833 7 589 180 111 0 0 chrUextra 596617 596644 -28408012 + (CAG)n Simple_repeat Simple_repeat 3 29 0 7 589 5274 144 65 27 chrUextra 596644 596886 -28407770 + TART LINE telomeric 5645 5914 -8563 7 589 3987 48 2 22 chrUextra 596885 597392 -28407264 + TART LINE telomeric 2952 3448 -11029 7 589 11592 31 4 3 chrUextra 597492 598992 -28405664 + GTWIN_I LTR Gypsy 5186 7129 -393 7 589 222 151 13 27 chrUextra 599175 599250 -28405406 + (TTTA)n Simple_repeat Simple_repeat 4 77 0 7 589 417 229 18 18 chrUextra 600037 600148 -28404508 + Ulysses_I LTR Gypsy 1952 2062 -4319 7 589 4364 14 0 16 chrUextra 600690 601180 -28403476 - Gypsy12_I LTR Gypsy -354 5192 4711 7 589 8585 18 38 1 chrUextra 601177 602186 -28402470 - Gypsy12_I LTR Gypsy -1185 4361 3316 7 589 3702 194 30 19 chrUextra 602290 603750 -28400906 + SAR_DM Satellite Satellite 1 1475 -203 7 589 3160 39 5 38 chrUextra 603883 604450 -28400206 + PROTOP_A DNA P 570 1105 0 7 589 1322 323 7 11 chrUextra 604470 605023 -28399633 - Gypsy4_I LTR Gypsy -5106 1182 495 7 589 22 0 0 0 chrUextra 605254 605276 -28399380 + AT_rich Low_complexity Low_complexity 1 22 0 7 589 8434 22 6 2 chrUextra 605464 606452 -28398204 - PROTOP_A DNA P -113 992 1 7 589 4167 22 4 18 chrUextra 606452 606950 -28397706 - CIRCE LINE Composite -3926 2430 1940 7 589 1846 5 0 0 chrUextra 607050 607249 -28397407 + Gypsy4_I LTR Gypsy 6090 6288 0 7 589 2524 18 7 0 chrUextra 607249 607534 -28397122 + Gypsy4_LTR LTR Gypsy 1 287 0 7 589 1669 19 0 5 chrUextra 607534 607740 -28396916 - PROTOP_A DNA P -252 853 649 7 589 3219 41 36 2 chrUextra 607736 608155 -28396501 - PROTOP_B DNA P -562 591 159 7 589 1217 117 152 107 chrUextra 608152 608515 -28396141 + MAX_I LTR Pao 976 1354 -6560 7 589 23 0 0 0 chrUextra 609032 609055 -28395601 + AT_rich Low_complexity Low_complexity 1 23 0 7 589 803 306 49 37 chrUextra 609181 609290 -28395366 - Gypsy4_I LTR Gypsy -3214 2953 2820 7 589 1496 34 48 0 chrUextra 609290 609498 -28395158 - TLD2 Unknown Unknown 0 218 1 7 589 803 306 49 37 chrUextra 609498 609953 -28394703 - Gypsy4_I LTR Gypsy -3214 2819 2255 7 589 12360 28 24 8 chrUextra 610217 611690 -28392966 - DMCR1A LINE CR1 -1024 3446 1950 7 589 31 58 0 0 chrUextra 611840 611892 -28392764 + AT_rich Low_complexity Low_complexity 1 52 0 7 589 3379 40 0 2 chrUextra 611944 612344 -28392312 - STALKER4_LTR LTR Gypsy -3 399 1 7 589 8001 22 14 1 chrUextra 612344 613260 -28391396 + R1_DM LINE R1 4390 5317 -39 7 589 1688 318 66 47 chrUextra 613424 614829 -28389827 - HMSBEAGLE_I LTR Gypsy -1578 4951 3520 7 589 4629 6 6 0 chrUextra 614929 615478 -28389178 + ROVER-I_DM LTR Gypsy 6033 6584 0 7 589 1465 126 65 116 chrUextra 615478 615865 -28388791 + ROVER-LTR_DM LTR Gypsy 1 367 0 7 589 3684 44 2 9 chrUextra 615865 616397 -28388259 - PROTOP DNA P -3699 781 316 7 589 4450 225 74 52 chrUextra 616497 617951 -28386705 - Gypsy12_LTR LTR Gypsy -797 1539 55 7 589 5232 31 2 2 chrUextra 618064 618682 -28385974 - R1_DM LINE R1 -1350 4006 3389 7 589 7122 35 28 1 chrUextra 618680 619531 -28385125 - R1_DM LINE R1 -3237 2119 1246 7 589 13419 5 0 4 chrUextra 619631 621095 -28383561 - CIRCE LINE Composite -2493 3863 2406 7 589 6601 141 46 35 chrUextra 621195 622485 -28382171 - TART LINE telomeric -3843 10634 9331 7 589 361 216 44 44 chrUextra 622478 622638 -28382018 - TAHRE LINE telomeric -2993 7470 7311 7 589 12625 26 25 0 chrUextra 622756 624216 -28380440 + DMCR1A LINE CR1 2750 4245 -225 7 589 9714 15 2 0 chrUextra 624348 625451 -28379205 + PROTOP_A DNA P 1 1105 0 7 589 664 131 145 16 chrUextra 625501 625625 -28379031 - DNAREP1_DM LINE Penelope -128 466 327 7 589 554 181 19 9 chrUextra 625658 625764 -28378892 - Invader3_I LTR Gypsy -4068 820 714 7 589 4684 112 22 45 chrUextra 625875 626690 -28377966 + Gypsy8_I LTR Gypsy 1035 1728 -2619 7 589 477 133 9 37 chrUextra 626674 626783 -28377873 - DMSAT6 Satellite Satellite -138 332 227 7 589 3744 30 2 0 chrUextra 626888 627325 -28377331 + DMCR1A LINE CR1 2096 2533 -1937 7 589 5794 0 2 2 chrUextra 627430 628055 -28376601 - BS2 LINE Jockey -4086 635 11 7 589 405 70 18 0 chrUextra 629421 629478 -28375178 + BARI1 DNA Tc1 37 94 -1656 7 589 897 112 60 42 chrUextra 629479 629646 -28375010 - Gypsy12A_LTR LTR Gypsy -1695 585 416 7 589 1045 136 36 25 chrUextra 629717 630095 -28374561 + I_DM LINE I 4172 4450 -1781 7 589 2845 27 26 6 chrUextra 630096 630436 -28374220 + DMCR1A LINE CR1 1292 1638 -2832 7 589 4517 25 25 2 chrUextra 632087 632637 -28372019 + IDEFIX_LTR LTR Gypsy 32 594 0 7 589 25 0 0 0 chrUextra 632845 632870 -28371786 + AT_rich Low_complexity Low_complexity 1 25 0 7 589 3196 36 0 10 chrUextra 633140 633533 -28371123 + IDEFIX_I LTR Gypsy 1 389 -5239 7 589 1245 41 198 0 chrUextra 633633 633926 -28370730 + DMRT1A LINE R1 2985 3335 -1848 7 589 3507 34 5 0 chrUextra 633918 634332 -28370324 + DMRT1A LINE R1 4451 4866 -317 7 589 645 38 0 0 chrUextra 634328 634408 -28370248 + DMRT1A LINE R1 5094 5173 -10 7 589 1093 15 0 0 chrUextra 634409 634540 -28370116 + DOC3_DM LINE Jockey 620 750 -3990 7 589 939 39 7 59 chrUextra 634544 634679 -28369977 + DMCR1A LINE CR1 239 366 -4104 7 589 3368 42 12 5 chrUextra 634673 635077 -28369579 + DMCR1A LINE CR1 664 1070 -3400 7 589 2537 110 36 31 chrUextra 635177 636007 -28368649 + DMSAT6 Satellite Satellite 1 833 -92 7 589 2730 99 14 24 chrUextra 636026 636619 -28368037 + DMSAT6 Satellite Satellite 1 586 -1 7 589 3366 59 25 5 chrUextra 636721 637162 -28367494 + BATUMI_I LTR Pao 7514 7963 0 7 589 1534 47 0 30 chrUextra 637184 637383 -28367273 + BATUMI_LTR LTR Pao 32 224 -48 7 589 2627 44 6 0 chrUextra 637381 637698 -28366958 + STALKER4_LTR LTR Gypsy 61 379 -23 7 589 25 0 0 0 chrUextra 637858 637883 -28366773 + AT_rich Low_complexity Low_complexity 1 25 0 7 589 1157 206 4 4 chrUextra 637907 638160 -28366496 + Stalker2_I LTR Gypsy 291 543 -6859 7 589 7210 40 1 1 chrUextra 638262 639116 -28365540 - R1_DM LINE R1 -3667 1689 836 7 589 2571 90 161 20 chrUextra 639092 639575 -28365081 - R1_DM LINE R1 -4761 595 1 7 589 462 55 0 0 chrUextra 639575 639630 -28365026 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2578 7 589 564 28 0 0 chrUextra 639626 639697 -28364959 - R2_DM LINE R2 -4 3603 3533 7 589 12271 34 2 1 chrUextra 639797 641226 -28363430 + DMCR1A LINE CR1 1140 2569 -1901 7 589 364 113 0 19 chrUextra 642856 642910 -28361746 - BS2 LINE Jockey -4419 302 250 7 589 400 267 19 19 chrUextra 642916 643023 -28361633 - GTWIN_I LTR Gypsy -4769 1652 1546 7 589 2836 189 177 18 chrUextra 643112 643835 -28360821 - GTWIN_I LTR Gypsy -5149 1272 435 7 589 22 0 0 0 chrUextra 643944 643966 -28360690 + AT_rich Low_complexity Low_complexity 1 22 0 7 589 26 88 0 0 chrUextra 644008 644076 -28360580 + AT_rich Low_complexity Low_complexity 1 68 0 7 589 234 205 229 0 chrUextra 644161 644244 -28360412 - Gypsy_I LTR Gypsy -6405 102 1 7 589 6348 16 1 0 chrUextra 644382 645112 -28359544 - PROTOP_A DNA P -374 731 1 7 589 557 43 0 0 chrUextra 645112 645181 -28359475 - DOC3_DM LINE Jockey -2994 1746 1678 7 589 922 18 0 9 chrUextra 645181 645293 -28359363 - TRANSIB2 DNA Transib 0 2844 2734 7 589 4186 41 35 8 chrUextra 645289 645806 -28358850 - DOC3_DM LINE Jockey -1454 3286 2756 7 589 1565 104 50 11 chrUextra 645906 646187 -28358469 - DMSAT6 Satellite Satellite -48 422 131 7 589 2623 84 15 45 chrUextra 646198 646670 -28357986 - DMSAT6 Satellite Satellite -4 466 9 7 589 2446 112 42 17 chrUextra 646688 647327 -28357329 - DMSAT6 Satellite Satellite -3 655 1 7 589 9791 66 34 5 chrUextra 647428 648849 -28355807 + DMCR1A LINE CR1 2303 4083 -387 7 589 1705 30 5 0 chrUextra 648949 649148 -28355508 - PROTOP_B DNA P -953 200 1 7 589 3327 55 29 0 chrUextra 649149 649565 -28355091 + DOC3_DM LINE Jockey 3065 3492 -1248 7 589 4067 37 39 0 chrUextra 649550 650040 -28354616 + DMCR1A LINE CR1 3962 4470 0 7 589 2864 21 3 3 chrUextra 650038 650369 -28354287 + DOC3_DM LINE Jockey 811 1141 -3599 7 589 4335 77 22 25 chrUextra 650610 651470 -28353186 - PROTOP_A DNA P 0 1153 297 7 589 293 188 0 0 chrUextra 651470 651534 -28353122 - Gypsy8_I LTR Gypsy -4054 293 230 7 589 246 185 18 18 chrUextra 651739 651794 -28352862 - Gypsy8_LTR LTR Gypsy -248 56 2 7 589 467 90 0 0 chrUextra 651987 652095 -28352561 - RSP Satellite Satellite -54 108 1 7 589 830 143 7 19 chrUextra 652135 652686 -28351970 - RSP Satellite Satellite -1 544 1 7 589 6452 13 3 10 chrUextra 652679 653400 -28351256 - Gypsy2_I LTR Gypsy -1085 5050 4335 7 589 366 362 43 45 chrUextra 653528 653904 -28350752 + BS LINE Jockey 465 839 -4287 7 589 343 169 39 0 chrUextra 654002 654079 -28350577 + BS LINE Jockey 973 1052 -4074 7 589 1221 313 31 10 chrUextra 654132 654619 -28350037 + BS LINE Jockey 1165 1661 -3465 7 589 2373 29 0 7 chrUextra 655009 655284 -28349372 + R1_DM LINE R1 5084 5356 0 7 73 8814 55 11 2 chrUextra 655317 656416 -28348240 + R1_DM LINE R1 1 1109 -4247 7 590 5878 146 41 106 chrUextra 656517 657894 -28346762 + TART LINE telomeric 5744 7031 -7446 7 590 5643 11 3 3 chrUextra 658025 658658 -28345998 - LSU-rRNA_Dme rRNA rRNA -2443 1457 825 7 590 1269 0 0 0 chrUextra 658663 658800 -28345856 - LSU-rRNA_Dme rRNA rRNA -3763 137 1 7 590 21 95 0 0 chrUextra 658812 658875 -28345781 + AT_rich Low_complexity Low_complexity 1 63 0 7 590 28 29 0 0 chrUextra 658901 658936 -28345720 + AT_rich Low_complexity Low_complexity 1 35 0 7 590 12458 10 28 1 chrUextra 659528 660929 -28343727 + Gypsy4_I LTR Gypsy 905 2342 -3946 7 590 8604 37 7 0 chrUextra 661029 662038 -28342618 + DMCR1A LINE CR1 3455 4470 0 7 590 871 54 0 9 chrUextra 662113 662225 -28342431 + ROOA_I LTR Pao 6730 6840 -9 7 590 1386 256 54 19 chrUextra 662528 663271 -28341385 + QUASIMODO_I LTR Gypsy 5186 6060 0 7 590 247 79 0 116 chrUextra 663271 663314 -28341342 + QUASIMODO_LTR LTR Gypsy 1 38 -620 7 590 204 40 0 0 chrUextra 663314 663339 -28341317 + (CA)n Simple_repeat Simple_repeat 2 26 0 7 590 4862 38 0 0 chrUextra 663348 663927 -28340729 + DMRT1B LINE R1 3885 4463 -720 7 590 5550 22 0 3 chrUextra 664027 664664 -28339992 - DMRT1A LINE R1 -4348 835 201 7 590 189 72 108 0 chrUextra 664685 664768 -28339888 + (GTCTG)n Simple_repeat Simple_repeat 1 92 0 7 590 591 56 0 0 chrUextra 664788 664860 -28339796 + DMRT1A LINE R1 2623 2694 -2489 7 590 5185 7 0 0 chrUextra 664858 665426 -28339230 + DMRT1A LINE R1 2807 3374 -1809 7 590 271 278 34 26 chrUextra 666561 666767 -28337889 + DM297_I LTR Gypsy 2372 2443 -3724 7 590 550 234 138 0 chrUextra 666779 666924 -28337732 + Gypsy4_I LTR Gypsy 2521 2685 -3603 7 590 5641 42 26 18 chrUextra 667024 667749 -28336907 - R1_DM LINE R1 -3897 1459 729 7 590 2992 68 5 5 chrUextra 667736 668123 -28336533 - R1_DM LINE R1 -4969 387 1 7 590 2380 23 0 0 chrUextra 668156 668421 -28336235 - R1_DM LINE R1 0 5356 5092 7 590 3419 16 5 0 chrUextra 668521 668907 -28335749 - PROTOP_A DNA P -717 388 1 7 590 243 214 100 0 chrUextra 669047 669117 -28335539 + Gypsy9_I LTR Gypsy 1501 1577 -3100 7 590 1883 280 50 13 chrUextra 669214 669898 -28334758 + Gypsy4_I LTR Gypsy 2608 3316 -2972 7 590 10739 69 0 17 chrUextra 670013 671405 -28333251 - Gypsy10_I LTR Gypsy -2258 3020 1653 7 590 384 199 7 26 chrUextra 671564 671697 -28332959 - FW3_DM LINE Jockey -1510 1622 1526 7 590 922 179 46 7 chrUextra 671697 671926 -28332730 - DOC4_DM LINE Jockey -914 1877 1735 7 590 431 266 8 8 chrUextra 672549 672674 -28331982 - DIVER2_I LTR Pao -497 3650 3526 7 590 546 169 115 28 chrUextra 673023 673205 -28331451 + Gypsy12A_LTR LTR Gypsy 677 874 -1406 7 590 2224 176 136 147 chrUextra 673372 674382 -28330274 + Gypsy12A_LTR LTR Gypsy 967 1965 -315 7 590 6127 12 1 9 chrUextra 674482 675180 -28329476 - CIRCE LINE Composite -2122 4234 3542 7 590 5561 31 12 25 chrUextra 675177 675869 -28328787 - CIRCE LINE Composite -3499 2857 2175 7 590 293 174 70 102 chrUextra 676324 676452 -28328204 - BS LINE Jockey -4967 159 36 7 590 488 113 0 0 chrUextra 676455 676526 -28328130 + DMCR1A LINE CR1 2526 2596 -1874 7 590 1119 131 84 42 chrUextra 676530 676745 -28327911 + DMCR1A LINE CR1 2771 2994 -1476 7 590 1034 113 7 0 chrUextra 676739 676889 -28327767 + DMCR1A LINE CR1 3247 3397 -1073 7 590 1149 122 23 60 chrUextra 677136 677353 -28327303 - DNAREP1_DM LINE Penelope -5 589 381 7 590 12047 18 12 0 chrUextra 677453 678835 -28325821 + STALKER4_I LTR Gypsy 3799 5196 -1334 7 590 1667 174 41 3 chrUextra 678935 679379 -28325277 - BS3_DM LINE Jockey -1545 245 1 7 590 1408 146 23 15 chrUextra 679380 679644 -28325012 - MDG1_LTR LTR Gypsy -30 412 147 7 590 1547 83 33 8 chrUextra 679639 679882 -28324774 - DM297_I LTR Gypsy -3212 2955 2707 7 590 2624 111 14 24 chrUextra 679890 680316 -28324340 - DM297_I LTR Gypsy -3376 2791 2370 7 590 1604 36 35 15 chrUextra 680416 680613 -28324043 - PROTOP_B DNA P -952 201 1 7 590 52 30 0 0 chrUextra 680947 681013 -28323643 + AT_rich Low_complexity Low_complexity 1 66 0 7 590 7464 37 25 1 chrUextra 681896 682788 -28321868 + R1_DM LINE R1 867 1779 -3577 7 590 2991 18 125 4 chrUextra 682788 683276 -28321380 + R1_DM LINE R1 1974 2520 -2836 7 590 5443 22 0 0 chrUextra 683376 683998 -28320658 - FW_DM LINE Jockey -1610 3082 2461 7 590 6500 26 0 1 chrUextra 683996 684755 -28319901 - FW_DM LINE Jockey -2506 2186 1429 7 590 6876 26 21 0 chrUextra 684855 685657 -28318999 - FW_DM LINE Jockey -800 3892 3074 7 590 2464 21 3 0 chrUextra 685661 685951 -28318705 - FW_DM LINE Jockey -1802 2890 2600 7 590 2438 25 3 0 chrUextra 685950 686232 -28318424 - FW_DM LINE Jockey -2499 2193 1911 7 590 1518 108 126 96 chrUextra 686533 686878 -28317778 + STALKER4_LTR LTR Gypsy 69 372 0 7 590 251 253 11 11 chrUextra 686994 687082 -28317574 + Invader2_I LTR Gypsy 4322 4409 -183 7 590 5411 138 21 83 chrUextra 687829 689183 -28315473 + HETA LINE telomeric 1 1134 -4947 7 590 2565 84 8 29 chrUextra 689283 689661 -28314995 - HETA LINE telomeric -3811 2270 1901 7 590 1527 61 0 25 chrUextra 689649 689851 -28314805 - HETA LINE telomeric -4519 1562 1366 7 590 5343 88 62 24 chrUextra 689847 690654 -28314002 - TART LINE telomeric -3916 10561 9724 7 590 227 247 62 0 chrUextra 690755 690836 -28313820 + TOM_I LTR Gypsy 5843 5928 -184 7 590 1934 52 40 4 chrUextra 690865 691116 -28313540 - DMTOM1_LTR LTR Gypsy -150 260 1 7 590 433 258 32 53 chrUextra 691114 691302 -28313354 - DM176_I LTR Gypsy 0 6420 6237 7 590 11708 28 4 0 chrUextra 692226 693595 -28311061 - DMRT1A LINE R1 -3259 1924 550 7 590 12555 7 0 0 chrUextra 693702 695063 -28309593 - TART LINE telomeric -885 13592 12232 7 590 1289 148 0 37 chrUextra 695163 695381 -28309275 + BS3_DM LINE Jockey 1771 1980 -2741 7 590 322 312 0 0 chrUextra 695385 695481 -28309175 + BS3_DM LINE Jockey 2088 2183 -2538 7 590 406 212 0 0 chrUextra 695513 695593 -28309063 + BS3_DM LINE Jockey 2866 2945 -1776 7 590 2504 44 183 0 chrUextra 695591 696189 -28308467 + BS3_DM LINE Jockey 101 807 -983 7 590 921 84 122 5 chrUextra 696178 696325 -28308331 + BS3_DM LINE Jockey 1191 1333 -457 7 590 1538 85 14 5 chrUextra 696318 696531 -28308125 + BS3_DM LINE Jockey 1539 1753 -37 7 590 788 33 0 0 chrUextra 696631 696721 -28307935 + R1_DM LINE R1 5267 5356 0 7 590 3254 76 5 7 chrUextra 696754 697190 -28307466 + R1_DM LINE R1 1 435 -4921 7 590 6883 38 1 1 chrUextra 697185 697995 -28306661 + R1_DM LINE R1 1101 1910 -3446 7 590 226 307 88 88 chrUextra 699783 700022 -28304634 + Gypsy12_I LTR Gypsy 1681 1919 -3627 7 590 785 325 6 23 chrUextra 700560 700907 -28303749 + Gypsy12_I LTR Gypsy 2947 3287 -2259 7 590 3576 5 0 0 chrUextra 701026 701421 -28303235 - Stalker2_LTR LTR Gypsy -29 395 1 7 590 1057 142 0 33 chrUextra 701421 701603 -28303053 + Gypsy12_LTR LTR Gypsy 2161 2336 0 7 590 2401 153 137 0 chrUextra 701603 702089 -28302567 - FW_DM LINE Jockey -3430 1262 710 7 590 23 33 0 0 chrUextra 702357 702387 -28302269 + AT_rich Low_complexity Low_complexity 1 30 0 7 590 2749 35 143 9 chrUextra 702490 702931 -28301725 + TRANSIB3 DNA Transib 807 1306 -1577 7 590 556 29 0 0 chrUextra 702940 703008 -28301648 + TRANSIB3 DNA Transib 2392 2459 -424 7 590 1080 85 147 4 chrUextra 703020 703245 -28301411 + TRANSIB3 DNA Transib 2624 2880 -3 7 590 512 263 78 35 chrUextra 703311 703543 -28301113 + Copia_I LTR Copia 3486 3727 -866 7 590 709 246 87 28 chrUextra 703554 703843 -28300813 + Copia_I LTR Copia 3819 4124 -469 7 590 2633 164 62 88 chrUextra 703949 704765 -28299891 - HETA LINE telomeric -5192 889 95 7 590 3834 84 18 26 chrUextra 704763 705310 -28299346 - TART LINE telomeric -3814 10663 10121 7 590 25 31 0 0 chrUextra 705924 705956 -28298700 + AT_rich Low_complexity Low_complexity 1 32 0 7 590 634 110 28 0 chrUextra 706227 706336 -28298320 + PROTOP_B DNA P 201 312 -841 7 590 230 59 59 0 chrUextra 706352 706386 -28298270 - DNAREP1_DM LINE Penelope -363 231 196 7 590 4387 165 93 31 chrUextra 706870 707823 -28296833 + STALKER4_I LTR Gypsy 1209 2220 -4310 7 590 291 56 0 0 chrUextra 707811 707847 -28296809 + Stalker2_I LTR Gypsy 2628 2663 -4739 7 590 1551 96 37 8 chrUextra 707849 708090 -28296566 + STALKER4_I LTR Gypsy 2617 2864 -3666 7 590 982 73 7 21 chrUextra 708089 708229 -28296427 - Gypsy6A_LTR LTR Gypsy -70 350 213 7 590 4365 182 26 22 chrUextra 708334 709688 -28294968 + Gypsy2_I LTR Gypsy 1549 2916 -4096 7 590 6568 28 57 1 chrUextra 709788 711147 -28293509 - R1_DM LINE R1 -1294 4062 2526 7 590 10097 63 7 5 chrUextra 711247 712522 -28292134 + R1_DM LINE R1 960 2237 -3119 7 590 214 174 0 0 chrUextra 713947 713993 -28290663 + A-rich Low_complexity Low_complexity 1 46 0 7 590 5674 5 10 0 chrUextra 714164 714789 -28289867 + Copia2_I LTR Copia 615 1245 -2917 7 590 445 113 0 0 chrUextra 714793 714855 -28289801 - BS3_DM LINE Jockey -755 1035 974 7 590 2364 244 88 13 chrUextra 714890 715517 -28289139 - BS2 LINE Jockey -2195 2526 1853 7 590 5579 33 45 0 chrUextra 715619 716304 -28288352 + NINJA_I LTR Pao 4466 5181 -830 7 590 5643 28 1 12 chrUextra 716298 716974 -28287682 + NINJA_I LTR Pao 1614 2282 -3729 7 590 304 289 11 0 chrUextra 718577 718667 -28285989 - BATUMI_I LTR Pao -1707 6256 6166 7 590 1024 305 95 17 chrUextra 719110 719520 -28285136 - DIVER2_I LTR Pao -274 3873 3432 7 590 272 243 14 0 chrUextra 719523 719593 -28285063 - DIVER2_I LTR Pao -1019 3128 3058 7 590 797 282 8 27 chrUextra 719622 719881 -28284775 + BS LINE Jockey 2019 2272 -2854 7 590 12546 5 0 0 chrUextra 719981 721332 -28283324 + Gypsy_I LTR Gypsy 3060 4410 -2097 7 590 294 119 0 243 chrUextra 721433 721544 -28283112 + Gypsy2_I LTR Gypsy 595 678 -5457 7 590 21 0 0 0 chrUextra 721849 721870 -28282786 + AT_rich Low_complexity Low_complexity 1 21 0 7 590 362 194 0 0 chrUextra 722065 722132 -28282524 + IDEFIX_I LTR Gypsy 1 67 -5561 7 590 1440 186 236 48 chrUextra 722146 722783 -28281873 + IDEFIX_I LTR Gypsy 234 990 -4638 7 590 3152 11 18 50 chrUextra 722883 723266 -28281390 + Gypsy12_LTR LTR Gypsy 1966 2336 0 7 590 831 194 1 0 chrUextra 723804 723961 -28280695 + Gypsy3_I LTR Gypsy 1398 1534 -4643 7 590 1707 284 30 17 chrUextra 724336 724912 -28279744 - TOM_I LTR Gypsy -920 5192 4610 7 590 3918 197 27 5 chrUextra 724895 725681 -28278975 - TOM_I LTR Gypsy -2864 3248 2446 7 590 12148 6 1 0 chrUextra 725781 727129 -28277527 - HETA LINE telomeric -1692 4389 3040 7 590 4582 27 94 0 chrUextra 727229 727783 -28276873 + R1_DM LINE R1 4086 4691 -665 7 590 1248 62 151 6 chrUextra 727773 727952 -28276704 + R1_DM LINE R1 5034 5238 -118 7 590 1343 73 0 17 chrUextra 727935 728116 -28276540 + R1_DM LINE R1 224 401 -4955 7 590 3577 36 60 2 chrUextra 728127 728577 -28276079 + R1_DM LINE R1 721 1196 -4160 7 590 5623 45 22 0 chrUextra 728677 729358 -28275298 + Baggins1 LINE LOA 4443 5138 -315 7 590 26 0 0 0 chrUextra 730914 730940 -28273716 + AT_rich Low_complexity Low_complexity 1 26 0 7 590 428 137 58 44 chrUextra 731569 731706 -28272950 + NTS_DM Other Other 102 240 0 7 590 276 146 21 0 chrUextra 731706 731754 -28272902 + NTS_DM Other Other 1 49 -191 7 590 1159 137 30 22 chrUextra 731852 732083 -28272573 + NTS_DM Other Other 8 240 0 7 590 303 104 21 0 chrUextra 732083 732131 -28272525 + NTS_DM Other Other 1 49 -191 7 590 1128 133 0 5 chrUextra 732212 732409 -28272247 + NTS_DM Other Other 1 196 -44 7 590 293 125 21 0 chrUextra 732499 732547 -28272109 + NTS_DM Other Other 1 49 -191 7 590 1079 155 34 21 chrUextra 732631 732868 -28271788 + NTS_DM Other Other 1 240 0 7 590 287 109 22 0 chrUextra 732868 732914 -28271742 + NTS_DM Other Other 1 47 -193 7 590 3582 14 5 0 chrUextra 733014 733452 -28271204 + Invader2_I LTR Gypsy 4153 4592 0 7 590 2268 26 0 19 chrUextra 733452 733723 -28270933 + Invader2_LTR LTR Gypsy 1 266 0 7 590 2234 246 8 14 chrUextra 733723 734352 -28270304 + IDEFIX_I LTR Gypsy 2050 2674 -2954 7 590 5816 48 87 0 chrUextra 734458 735215 -28269441 - Baggins1 LINE LOA -601 4852 4030 7 590 1756 188 129 0 chrUextra 735216 735573 -28269083 - GTWIN_I LTR Gypsy -1969 4452 4050 7 590 662 69 0 0 chrUextra 735572 735659 -28268997 - BS3_DM LINE Jockey 0 1790 1704 7 590 1123 63 7 0 chrUextra 735658 735800 -28268856 - BS3_DM LINE Jockey -633 1157 1015 7 590 6100 16 27 0 chrUextra 735900 737240 -28267416 - FW_DM LINE Jockey -551 4141 2766 7 590 10716 47 42 6 chrUextra 737340 738678 -28265978 - Baggins1 LINE LOA -598 4855 3470 7 590 1844 24 5 0 chrUextra 738784 738995 -28265661 - R1_DM LINE R1 -571 4785 4574 7 590 6078 32 1 1 chrUextra 738992 739702 -28264954 - R1_DM LINE R1 -1121 4235 3526 7 590 3698 21 0 0 chrUextra 739696 740119 -28264537 - R1_DM LINE R1 -2231 3125 2703 7 590 9551 33 3 1 chrUextra 740219 741328 -28263328 + G5_DM LINE Jockey 760 1870 -2986 7 590 2197 20 0 0 chrUextra 741307 741558 -28263098 + G5_DM LINE Jockey 2604 2854 -2002 7 590 1821 95 154 32 chrUextra 741658 741996 -28262660 - FW3_DM LINE Jockey -2659 473 95 7 590 489 137 248 8 chrUextra 742357 742482 -28262174 - DMCR1A LINE CR1 -51 4419 4265 7 590 23 68 0 0 chrUextra 742881 742925 -28261731 + AT_rich Low_complexity Low_complexity 1 44 0 7 590 1476 12 0 6 chrUextra 743097 743266 -28261390 + Gypsy4_I LTR Gypsy 6120 6287 -1 7 590 2501 28 3 0 chrUextra 743267 743553 -28261103 + Gypsy4_LTR LTR Gypsy 1 287 0 7 590 1077 176 96 149 chrUextra 743629 744004 -28260652 - DNAREP1_DM LINE Penelope -68 526 172 7 590 943 298 64 6 chrUextra 744022 744349 -28260307 + Gypsy3_I LTR Gypsy 5374 5719 -458 7 590 286 302 12 0 chrUextra 744563 744649 -28260007 - Gypsy_DS LTR Gypsy -6048 1474 1388 7 590 318 224 11 34 chrUextra 744730 744818 -28259838 - Gypsy6_LTR LTR Gypsy -168 239 154 7 590 23 54 0 0 chrUextra 745507 745544 -28259112 + AT_rich Low_complexity Low_complexity 1 37 0 7 590 12086 1 0 0 chrUextra 745973 747310 -28257346 - TABOR_I LTR Gypsy -636 5700 4364 7 590 9304 112 1 1 chrUextra 747413 748744 -28255912 + HETA LINE telomeric 1858 3188 -2893 7 590 9878 30 66 35 chrUextra 748846 750174 -28254482 + Gypsy12_LTR LTR Gypsy 607 1976 -360 7 590 7374 54 19 2 chrUextra 750274 751188 -28253468 - DMRT1A LINE R1 -4254 929 1 7 590 3465 41 0 0 chrUextra 751190 751604 -28253052 - DOC3_DM LINE Jockey -4110 630 217 7 590 9920 12 38 1 chrUextra 751707 752908 -28251748 + STALKER4_I LTR Gypsy 5285 6530 0 7 590 1029 24 0 0 chrUextra 752908 753033 -28251623 + STALKER4_LTR LTR Gypsy 1 125 -277 7 590 3463 5 0 0 chrUextra 753133 753513 -28251143 - MDG3_I LTR Gypsy -4606 380 1 7 590 2448 4 0 0 chrUextra 753512 753779 -28250877 - MDG3_LTR LTR Gypsy 0 267 1 7 590 1836 270 37 19 chrUextra 753783 754462 -28250194 + ROVER-I_DM LTR Gypsy 696 1386 -5198 7 590 395 311 13 7 chrUextra 754677 754829 -28249827 - NOMAD_I LTR Gypsy -1528 5044 4892 7 590 717 329 9 12 chrUextra 754855 755175 -28249481 - NOMAD_I LTR Gypsy -1770 4802 4484 7 590 335 275 156 21 chrUextra 755356 755497 -28249159 - NOMAD_I LTR Gypsy -2872 3700 3541 7 590 996 250 114 12 chrUextra 755517 755841 -28248815 - NOMAD_I LTR Gypsy -3182 3390 3034 7 590 878 53 0 17 chrUextra 756015 756130 -28248526 - CIRCE LINE Composite -5271 1085 973 7 590 6997 65 52 7 chrUextra 756272 757200 -28247456 - CIRCE LINE Composite -5386 970 1 7 590 661 48 0 12 chrUextra 757227 757311 -28247345 - CIRCE LINE Composite -79 6277 6195 7 590 397 21 21 0 chrUextra 757419 757466 -28247190 - Gypsy2_I LTR Gypsy -6087 48 1 7 590 3249 11 0 0 chrUextra 757466 757819 -28246837 - Gypsy2_LTR LTR Gypsy 0 353 1 7 590 341 247 26 79 chrUextra 757823 758012 -28246644 + Gypsy11_LTR LTR Gypsy 110 288 -164 7 590 1453 193 135 5 chrUextra 758047 758432 -28246224 + FW_DM LINE Jockey 357 791 -3901 7 590 310 28 0 0 chrUextra 758433 758469 -28246187 + FW_DM LINE Jockey 4323 4358 -334 7 590 2015 47 8 45 chrUextra 758469 758737 -28245919 + BLOOD_LTR LTR Gypsy 1 258 -141 7 590 813 96 233 0 chrUextra 759318 759464 -28245192 + FB4_DM DNA Tc1 3 182 -3907 7 590 4707 24 61 80 chrUextra 759497 760172 -28244484 + PROTOP_A DNA P 1 662 -443 7 590 356 362 12 4 chrUextra 760599 760843 -28243813 - BURDOCK_I LTR Gypsy -4878 982 737 7 590 30 27 0 0 chrUextra 761540 761577 -28243079 + AT_rich Low_complexity Low_complexity 1 37 0 7 590 1915 43 9 0 chrUextra 761695 761926 -28242730 - G5_DM LINE Jockey -651 4205 3973 7 590 3898 16 158 6 chrUextra 761916 762409 -28242247 - G5_DM LINE Jockey -1041 3815 3248 7 590 2205 20 0 0 chrUextra 762387 762639 -28242017 - G5_DM LINE Jockey -2001 2855 2604 7 590 3309 48 5 2 chrUextra 762618 763017 -28241639 - G5_DM LINE Jockey -2986 1870 1471 7 590 12225 6 0 0 chrUextra 763117 764438 -28240218 - TART LINE telomeric -9935 4542 3222 7 590 4753 34 10 5 chrUextra 764538 765132 -28239524 + PROTOP_A DNA P 509 1105 0 7 590 329 0 0 0 chrUextra 765132 765170 -28239486 + PROTOP_A DNA P 1067 1104 -1 7 590 233 189 37 19 chrUextra 765335 765389 -28239267 + Gypsy8_LTR LTR Gypsy 2 56 -248 7 590 293 188 0 0 chrUextra 765593 765657 -28238999 + Gypsy8_I LTR Gypsy 230 293 -4054 7 590 1659 30 25 0 chrUextra 765657 765859 -28238797 + PROTOP DNA P 296 502 -3978 7 590 4893 13 6 0 chrUextra 765959 766502 -28238154 + DMRT1B LINE R1 4638 5183 0 7 590 638 0 0 0 chrUextra 766504 766577 -28238079 + QUASIMODO_LTR LTR Gypsy 55 127 -531 7 590 1868 10 0 0 chrUextra 767379 767582 -28237074 + PROTOP DNA P 4277 4479 -1 7 590 450 231 18 9 chrUextra 767757 767866 -28236790 + MICROPIA_LTR LTR Gypsy 367 476 0 7 590 1464 168 120 102 chrUextra 767919 768517 -28236139 - Gypsy12A_LTR LTR Gypsy -218 2062 1454 7 590 930 0 0 0 chrUextra 768535 768643 -28236013 - DMCR1A LINE CR1 -168 4302 4195 7 590 424 109 16 0 chrUextra 768634 768698 -28235958 - DMCR1A LINE CR1 -492 3978 3914 7 590 21 0 0 0 chrUextra 769028 769049 -28235607 + AT_rich Low_complexity Low_complexity 1 21 0 7 590 25 65 0 0 chrUextra 769101 769147 -28235509 + AT_rich Low_complexity Low_complexity 1 46 0 7 590 1157 223 174 47 chrUextra 769240 769737 -28234919 - DNAREP1_DM LINE Penelope -25 569 10 7 590 833 164 48 72 chrUextra 769858 770107 -28234549 - Gypsy_LTR LTR Gypsy -86 396 154 7 590 288 300 63 20 chrUextra 770248 770503 -28234153 + Gypsy5_I LTR Gypsy 4759 5024 -1485 7 590 225 300 0 0 chrUextra 770671 770741 -28233915 + ZAM_I LTR Gypsy 7092 7161 -329 7 590 297 317 10 0 chrUextra 771434 771535 -28233121 + NOMAD_I LTR Gypsy 564 665 -5907 7 590 11035 41 1 1 chrUextra 771635 772952 -28231704 - HETA LINE telomeric -4085 1996 681 7 590 1620 0 0 0 chrUextra 773056 773258 -28231398 + (TTCTC)n Simple_repeat Simple_repeat 1 202 0 7 590 4729 0 0 0 chrUextra 773258 773763 -28230893 - TABOR_LTR LTR Gypsy -1 505 1 7 590 550 0 0 0 chrUextra 773761 773829 -28230827 - TABOR_I LTR Gypsy 0 6336 6269 7 590 4841 0 0 0 chrUextra 773829 774347 -28230309 + NOMAD_LTR LTR Gypsy 1 518 0 7 590 8844 46 91 2 chrUextra 774472 775740 -28228916 - IVK_DM LINE I -106 5296 3917 7 590 240 0 0 0 chrUextra 775885 775911 -28228745 + R1_DM LINE R1 5331 5356 0 7 590 10030 52 29 3 chrUextra 775944 777201 -28227455 + R1_DM LINE R1 1 1289 -4067 7 590 930 89 9 21 chrUextra 777301 778550 -28226106 + RSP Satellite Satellite 1 1234 0 7 590 2056 13 4 0 chrUextra 778901 779140 -28225516 - ALUII_DM Unknown Unknown 0 240 1 7 590 21 57 0 0 chrUextra 779140 779175 -28225481 + AT_rich Low_complexity Low_complexity 1 35 0 7 590 28 95 0 0 chrUextra 779330 779414 -28225242 + AT_rich Low_complexity Low_complexity 1 84 0 7 590 37 39 0 0 chrUextra 779515 779566 -28225090 + AT_rich Low_complexity Low_complexity 1 51 0 7 590 28 48 0 0 chrUextra 779921 779963 -28224693 + AT_rich Low_complexity Low_complexity 1 42 0 7 590 2725 0 3 0 chrUextra 780129 780423 -28224233 + BEL_I LTR Pao 5110 5404 0 7 590 3377 0 0 0 chrUextra 780423 780784 -28223872 + BEL_LTR LTR Pao 1 361 0 7 590 6108 0 0 0 chrUextra 780794 781443 -28223213 + BEL_I LTR Pao 1884 2532 -2872 7 590 3999 172 96 109 chrUextra 781575 782842 -28221814 + TART LINE telomeric 8950 10200 -4277 7 590 6949 127 40 54 chrUextra 782955 784265 -28220391 + BATUMI_I LTR Pao 3340 4631 -3332 7 590 27 0 0 0 chrUextra 784371 784398 -28220258 + AT_rich Low_complexity Low_complexity 1 27 0 7 590 25 0 0 0 chrUextra 784492 784517 -28220139 + AT_rich Low_complexity Low_complexity 1 25 0 7 590 625 209 127 102 chrUextra 784740 785023 -28219633 + MICROPIA_LTR LTR Gypsy 86 375 -101 7 590 4125 23 2 2 chrUextra 785197 785673 -28218983 + PROTOP DNA P 1 476 -4004 7 590 807 20 10 0 chrUextra 785776 785875 -28218781 + R1_DM LINE R1 3987 4086 -1270 7 73 6716 33 13 0 chrUextra 785873 786661 -28217995 + R1_DM LINE R1 4559 5356 0 7 591 2944 73 10 5 chrUextra 786694 787081 -28217575 + R1_DM LINE R1 1 389 -4967 7 591 8892 43 11 8 chrUextra 787181 788256 -28216400 - Baggins1 LINE LOA -982 4471 3394 7 591 1763 71 0 0 chrUextra 788264 788488 -28216168 - Baggins1 LINE LOA -2270 3183 2960 7 591 620 320 17 17 chrUextra 788596 788943 -28215713 + HMSBEAGLE_I LTR Gypsy 5039 5385 -1144 7 591 5973 14 0 0 chrUextra 790006 790667 -28213989 + G_DM LINE Jockey 2867 3527 -819 7 591 4950 52 22 0 chrUextra 790665 791301 -28213355 - R1_DM LINE R1 -4374 982 333 7 591 896 139 375 0 chrUextra 791880 792092 -28212564 + DNAREP1_DM LINE Penelope 304 594 0 7 591 26 30 0 0 chrUextra 792356 792389 -28212267 + AT_rich Low_complexity Low_complexity 1 33 0 7 591 5605 6 3 0 chrUextra 792806 793448 -28211208 - DM176_I LTR Gypsy -4145 2275 1632 7 591 5765 3 42 0 chrUextra 793436 794111 -28210545 - DM176_I LTR Gypsy -4926 1494 792 7 591 4304 28 2 23 chrUextra 794289 794804 -28209852 - CIRCE LINE Composite -4471 1885 1382 7 591 1802 38 0 0 chrUextra 794804 795016 -28209640 + STALKER4_LTR LTR Gypsy 1 212 -190 7 591 47 0 0 0 chrUextra 795460 795507 -28209149 + AT_rich Low_complexity Low_complexity 1 47 0 7 591 2545 125 1 23 chrUextra 797021 797767 -28206889 + DMSAT6 Satellite Satellite 1 729 -159 7 591 2331 120 39 34 chrUextra 797788 798325 -28206331 + DMSAT6 Satellite Satellite 1 540 -1 7 591 619 180 8 30 chrUextra 798425 798557 -28206099 - HETRP_DM Satellite Satellite -215 1657 1529 7 591 665 204 13 26 chrUextra 798682 798838 -28205818 - HETRP_DM Satellite Satellite -190 1682 1529 7 591 735 184 11 69 chrUextra 798964 799139 -28205517 - HETRP_DM Satellite Satellite -190 1682 1518 7 591 648 204 13 26 chrUextra 799269 799425 -28205231 - HETRP_DM Satellite Satellite -190 1682 1529 7 591 454 229 16 32 chrUextra 799553 799679 -28204977 - HETRP_DM Satellite Satellite -190 1682 1559 7 591 315 49 0 0 chrUextra 799688 799729 -28204927 + (TC)n Simple_repeat Simple_repeat 2 42 0 7 591 6070 3 0 1 chrUextra 799829 800490 -28204166 - POGO DNA Pogo -1461 660 1 7 591 541 104 31 0 chrUextra 800894 800990 -28203666 + PROTOP DNA P 3521 3619 -861 7 591 520 0 0 15 chrUextra 801067 801132 -28203524 + Copia_LTR LTR Copia 1 64 -212 7 591 3385 121 198 41 chrUextra 801232 801895 -28202761 + STALKER4_I LTR Gypsy 1584 2350 -4180 7 591 1557 92 37 8 chrUextra 801897 802138 -28202518 + STALKER4_I LTR Gypsy 2617 2864 -3666 7 591 2150 54 3 35 chrUextra 802137 802426 -28202230 - Gypsy6A_LTR LTR Gypsy -70 350 71 7 591 481 105 55 55 chrUextra 802444 802535 -28202121 + R1_DM LINE R1 1 91 -5265 7 591 722 195 13 25 chrUextra 802646 802804 -28201852 + HETRP_DM Satellite Satellite 1529 1684 -188 7 591 671 202 12 58 chrUextra 802905 803078 -28201578 + HETRP_DM Satellite Satellite 1518 1682 -190 7 591 658 206 13 25 chrUextra 803197 803356 -28201300 + HETRP_DM Satellite Satellite 1529 1685 -187 7 591 210 37 0 0 chrUextra 803497 803524 -28201132 + (GA)n Simple_repeat Simple_repeat 2 28 0 7 591 522 220 15 29 chrUextra 803524 803660 -28200996 + HETRP_DM Satellite Satellite 1549 1682 -190 7 591 728 188 13 25 chrUextra 803779 803937 -28200719 + HETRP_DM Satellite Satellite 1529 1684 -188 7 591 5764 23 1 11 chrUextra 804038 804707 -28199949 + R1_DM LINE R1 4694 5356 0 7 591 4775 60 3 3 chrUextra 804740 805340 -28199316 + R1_DM LINE R1 1 600 -4756 7 591 6883 45 12 3 chrUextra 805440 806292 -28198364 - R1_DM LINE R1 -3905 1451 593 7 591 1359 85 16 0 chrUextra 806290 806479 -28198177 - R1_DM LINE R1 -5164 192 1 7 591 2094 9 4 0 chrUextra 806512 806742 -28197914 - R1_DM LINE R1 0 5356 5126 7 591 3969 9 2 0 chrUextra 806842 807277 -28197379 + LSU-rRNA_Dme rRNA rRNA 3458 3893 -7 7 591 227 195 0 0 chrUextra 807293 807334 -28197322 + LSU-rRNA_Dme rRNA rRNA 2580 2620 -1280 7 591 6248 24 0 30 chrUextra 807384 808144 -28196512 - G_DM LINE Jockey -15 4331 3595 7 591 2902 33 0 0 chrUextra 808268 808604 -28196052 + DM1731_LTR LTR Copia 1 336 0 7 591 1553 0 6 0 chrUextra 808604 808774 -28195882 + DM1731_I LTR Copia 1 171 -3805 7 591 724 10 0 9 chrUextra 808772 808877 -28195779 - DOC LINE Jockey -1 4724 4621 7 591 6034 12 1 0 chrUextra 808875 809546 -28195110 + DM1731_I LTR Copia 163 834 -3142 7 591 3350 36 58 7 chrUextra 809648 810065 -28194591 - DMCR1A LINE CR1 -2951 1519 1082 7 591 3913 37 17 7 chrUextra 810378 810947 -28193709 + Transib5 DNA Transib 1191 1805 -1196 7 591 27 73 0 0 chrUextra 811308 811363 -28193293 + AT_rich Low_complexity Low_complexity 1 55 0 7 591 23 68 0 0 chrUextra 811401 811445 -28193211 + AT_rich Low_complexity Low_complexity 1 44 0 7 591 26 30 0 0 chrUextra 811491 811524 -28193132 + AT_rich Low_complexity Low_complexity 1 33 0 7 591 3145 55 57 0 chrUextra 811910 812346 -28192310 - PROTOP_A DNA P -49 1056 596 7 591 4580 204 19 0 chrUextra 812447 813287 -28191369 - TIRANT_I LTR Gypsy -5443 2249 1394 7 591 254 300 15 15 chrUextra 813336 813468 -28191188 + (TATATG)n Simple_repeat Simple_repeat 2 133 0 7 591 22 0 0 0 chrUextra 813494 813516 -28191140 + AT_rich Low_complexity Low_complexity 1 22 0 7 591 264 279 30 37 chrUextra 813595 813729 -28190927 - TIRANT_I LTR Gypsy -6337 1355 1223 7 591 708 97 7 22 chrUextra 813846 814116 -28190540 + RSP Satellite Satellite 1 266 0 7 591 7377 34 19 8 chrUextra 814120 814994 -28189662 - G5_DM LINE Jockey 0 4856 3973 7 591 1470 6 0 0 chrUextra 814984 815142 -28189514 - G5_DM LINE Jockey -1041 3815 3658 7 591 2309 19 0 0 chrUextra 815242 815498 -28189158 + R1_DM LINE R1 5101 5356 0 7 591 4900 59 3 3 chrUextra 815531 816144 -28188512 + R1_DM LINE R1 1 613 -4743 7 591 3351 50 0 0 chrUextra 816140 816537 -28188119 + R1_DM LINE R1 1234 1630 -3726 7 591 1995 89 101 30 chrUextra 816637 816974 -28187682 - BATUMI_I LTR Pao -7602 361 1 7 591 2143 36 3 31 chrUextra 816974 817261 -28187395 - BATUMI_I LTR Pao -679 7284 7006 7 591 5386 11 6 14 chrUextra 817266 817932 -28186724 - STALKER4_I LTR Gypsy -109 6421 5761 7 591 944 338 81 21 chrUextra 818044 818721 -28185935 - Invader6_I LTR Gypsy -1753 2346 1629 7 591 276 279 0 0 chrUextra 818746 818814 -28185842 - Invader4_I LTR Gypsy -1111 1302 1235 7 591 24 32 0 0 chrUextra 818820 818851 -28185805 + AT_rich Low_complexity Low_complexity 1 31 0 7 591 3217 74 28 129 chrUextra 819426 820044 -28184612 - CIRCE LINE Composite -821 5535 4981 7 591 2239 77 3 6 chrUextra 820407 820720 -28183936 - CIRCE LINE Composite -1376 4980 4669 7 591 3407 174 55 51 chrUextra 820823 822103 -28182553 - TAHRE LINE telomeric -14 10449 8037 7 591 5641 11 2 0 chrUextra 822211 822836 -28181820 + DMRT1A LINE R1 2385 3010 -2173 7 591 4853 73 15 12 chrUextra 822832 823501 -28181155 - TRANSIB4 DNA Transib -50 2560 1890 7 591 11130 22 26 1 chrUextra 823602 824892 -28179764 - R1_DM LINE R1 -1513 3843 2522 7 591 2780 12 68 0 chrUextra 824992 825115 -28179541 - Stalker3_LTR LTR Gypsy -25 347 225 7 591 207 0 0 0 chrUextra 825115 825138 -28179518 + (CTTAT)n Simple_repeat Simple_repeat 2 24 0 7 591 2780 12 68 0 chrUextra 825138 825339 -28179317 - Stalker3_LTR LTR Gypsy -148 224 2 7 591 1838 18 82 0 chrUextra 825339 825558 -28179098 + R1_DM LINE R1 4830 5066 -290 7 591 979 53 0 0 chrUextra 825555 825669 -28178987 + R1_DM LINE R1 5243 5356 0 7 591 4517 68 3 5 chrUextra 825702 826282 -28178374 + R1_DM LINE R1 1 579 -4777 7 591 833 60 0 0 chrUextra 826382 826482 -28178174 - CIRCE LINE Composite -5284 1072 973 7 591 7848 14 46 35 chrUextra 826624 827584 -28177072 - CIRCE LINE Composite -5386 970 1 7 591 690 46 11 0 chrUextra 827584 827671 -28176985 - CIRCE LINE Composite 0 6356 6269 7 591 5133 14 0 0 chrUextra 827771 828348 -28176308 + PROTOP DNA P 3904 4480 0 7 591 4979 70 90 13 chrUextra 829162 829859 -28174797 + R1_DM LINE R1 1 751 -4605 7 591 4948 58 0 2 chrUextra 829844 830446 -28174210 + R1_DM LINE R1 1135 1735 -3621 7 591 11304 20 1 2 chrUextra 830546 831832 -28172824 - R1_DM LINE R1 -817 4539 3256 7 591 4500 135 28 18 chrUextra 831932 833208 -28171448 - Gypsy3_I LTR Gypsy -776 5401 4042 7 591 5407 93 32 49 chrUextra 833317 834306 -28170350 - HETA LINE telomeric -5193 888 1 7 591 1833 107 3 10 chrUextra 834302 834596 -28170060 - TAHRE LINE telomeric -13 10450 10159 7 591 1500 289 71 28 chrUextra 834705 835344 -28169312 + Gypsy4_I LTR Gypsy 2797 3463 -2825 7 591 353 286 57 0 chrUextra 835344 835449 -28169207 + ACCORD_LTR LTR Gypsy 1 111 -447 7 591 234 239 0 0 chrUextra 835742 835788 -28168868 + Gypsy4_I LTR Gypsy 3452 3497 -2791 7 591 436 237 51 51 chrUextra 835799 835955 -28168701 + Gypsy4_I LTR Gypsy 3458 3705 -2155 7 591 366 256 98 102 chrUextra 836446 836711 -28167945 - Invader1_LTR LTR Gypsy -55 368 105 7 591 2441 82 32 20 chrUextra 836811 837227 -28167429 + Gypsy6A_LTR LTR Gypsy 1 420 0 7 591 591 45 0 236 chrUextra 837227 837371 -28167285 + Gypsy6_I LTR Gypsy 1 110 -6902 7 591 9040 100 49 6 chrUextra 837471 838754 -28165902 + Gypsy12_I LTR Gypsy 1056 2394 -3152 7 591 9767 60 51 7 chrUextra 838854 840137 -28164519 - HMSBEAGLE_I LTR Gypsy -3507 3022 1684 7 591 10968 20 46 0 chrUextra 840241 841520 -28163136 + DMRT1A LINE R1 1073 2410 -2773 7 591 11145 21 2 7 chrUextra 841620 842903 -28161753 - R1_DM LINE R1 -1179 4177 2902 7 591 4511 58 2 2 chrUextra 843003 843553 -28161103 + R1_DM LINE R1 1041 1590 -3766 7 591 6488 18 10 0 chrUextra 843554 844286 -28160370 + R1_DM LINE R1 1706 2444 -2912 7 591 1470 6 0 0 chrUextra 844386 844549 -28160107 - QUASIMODO_LTR LTR Gypsy -372 286 124 7 591 724 321 22 29 chrUextra 844627 845038 -28159618 + Invader5_I LTR Gypsy 1225 1632 -1702 7 591 1330 320 26 21 chrUextra 845045 845668 -28158988 + MICROPIA_I LTR Gypsy 2536 3161 -1315 7 591 5006 33 0 2 chrUextra 845768 846372 -28158284 - TRANSIB2 DNA Transib -2241 603 1 7 591 955 9 0 0 chrUextra 846372 846484 -28158172 - Invader2_I LTR Gypsy -4480 112 1 7 591 2413 15 0 0 chrUextra 846484 846750 -28157906 - Invader2_LTR LTR Gypsy 0 266 1 7 591 2629 33 0 0 chrUextra 846750 847049 -28157607 + DMCR1A LINE CR1 3459 3757 -713 7 591 9969 40 13 32 chrUextra 847149 848428 -28156228 + Gypsy12_LTR LTR Gypsy 207 1461 -875 7 591 250 263 13 13 chrUextra 849151 849228 -28155428 + (CATA)n Simple_repeat Simple_repeat 1 77 0 7 591 7955 25 13 0 chrUextra 849935 850847 -28153809 + R1_DM LINE R1 4143 5066 -290 7 591 954 27 27 0 chrUextra 850844 850955 -28153701 + R1_DM LINE R1 5243 5356 0 7 591 1275 66 6 0 chrUextra 850988 851155 -28153501 + R1_DM LINE R1 1 168 -5188 7 591 3709 7 0 0 chrUextra 851285 851695 -28152961 - Gypsy5_LTR LTR Gypsy -20 410 1 7 591 7860 2 5 0 chrUextra 851695 852563 -28152093 - Gypsy5_I LTR Gypsy 0 6509 5638 7 591 2466 109 14 29 chrUextra 852663 853919 -28150737 + DMSAT6 Satellite Satellite 1 1237 -67 7 591 10816 25 30 1 chrUextra 854040 855317 -28149339 - FW_DM LINE Jockey -2762 1930 616 7 591 1512 116 96 4 chrUextra 855703 855963 -28148693 + DNAREP1_DM LINE Penelope 1 284 -310 7 591 2192 154 77 65 chrUextra 856185 856693 -28147963 + DNAREP1_DM LINE Penelope 1 514 -80 7 591 3886 93 77 39 chrUextra 856793 857494 -28147162 + TART LINE telomeric 2635 3362 -11115 7 591 1468 138 63 24 chrUextra 857489 857741 -28146915 + TART LINE telomeric 3683 3944 -10533 7 591 368 283 127 62 chrUextra 857744 858055 -28146601 + TART LINE telomeric 8899 9206 -1448 7 591 3770 202 50 28 chrUextra 858170 859445 -28145211 + SAR_DM Satellite Satellite 1 1304 -168 7 591 1553 77 0 0 chrUextra 859545 859741 -28144915 + CIRCE LINE Composite 4182 4377 -1979 7 591 419 100 14 28 chrUextra 859741 859813 -28144843 - DMTOM1_LTR LTR Gypsy 0 410 340 7 591 617 188 46 55 chrUextra 859804 860013 -28144643 - DMTOM1_LTR LTR Gypsy -19 488 284 7 591 278 140 20 20 chrUextra 860121 860172 -28144484 - DMTOM1_LTR LTR Gypsy -238 269 219 7 591 3425 89 69 29 chrUextra 860267 860821 -28143835 + CIRCE LINE Composite 4371 4946 -1410 7 591 8688 46 28 49 chrUextra 860921 862196 -28142460 + BATUMI_I LTR Pao 428 1675 -6288 7 591 4201 204 24 34 chrUextra 862297 863571 -28141085 + SAR_DM Satellite Satellite 1 1260 -203 7 591 2757 198 33 82 chrUextra 863671 864541 -28140115 + HETA LINE telomeric 3282 4109 -1972 7 591 2394 92 10 30 chrUextra 864541 864945 -28139711 + TART LINE telomeric 9331 9726 -4751 7 591 3733 21 0 2 chrUextra 865045 865473 -28139183 - PROTOP_A DNA P -678 427 1 7 591 7053 27 50 8 chrUextra 865473 866319 -28138337 - DMCR1A LINE CR1 -2825 1645 765 7 591 4271 3 132 0 chrUextra 866419 867056 -28137600 - TART LINE telomeric -346 14131 13411 7 591 2792 176 11 10 chrUextra 867054 867575 -28137081 - TAHRE LINE telomeric -11 10452 9931 7 591 341 186 45 34 chrUextra 867597 867686 -28136970 - TAHRE LINE telomeric -631 9832 9743 7 591 3713 203 45 25 chrUextra 867793 869065 -28135591 - SAR_DM Satellite Satellite -224 1297 1 7 591 2740 104 16 20 chrUextra 869200 870437 -28134219 - DMSAT6 Satellite Satellite 0 1231 1 7 591 1493 0 0 0 chrUextra 870537 870703 -28133953 - Copia_I LTR Copia -4427 166 1 7 591 2442 0 0 0 chrUextra 870703 870979 -28133677 - Copia_LTR LTR Copia 0 276 1 7 591 281 106 0 21 chrUextra 871171 871219 -28133437 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 7 591 263 128 0 21 chrUextra 871430 871478 -28133178 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 7 591 4701 36 54 33 chrUextra 871909 872518 -28132138 - Gypsy12_LTR LTR Gypsy -1714 622 1 7 591 5802 12 6 5 chrUextra 872518 873169 -28131487 - Gypsy12_I LTR Gypsy 0 5546 4895 7 591 10345 27 34 7 chrUextra 873280 874550 -28130106 + ROO_I LTR Pao 2225 3528 -4728 7 591 3866 42 2 0 chrUextra 874650 875121 -28129535 + PROTOP_A DNA P 634 1105 0 7 591 2268 86 35 51 chrUextra 875211 875639 -28129017 + ACCORD2_I LTR Gypsy 1608 2028 -5184 7 591 1882 85 58 10 chrUextra 875609 875918 -28128738 + ACCORD2_I LTR Gypsy 1836 2159 -5053 7 591 6240 5 3 4 chrUextra 876020 877290 -28127366 + G2_DM LINE Jockey 1675 3002 -100 7 591 5402 19 1 6 chrUextra 877390 878659 -28125997 - Invader2_I LTR Gypsy -1792 2800 1474 7 591 4590 8 0 0 chrUextra 878759 879257 -28125399 + Copia2_I LTR Copia 3530 4027 -135 7 591 208 200 31 0 chrUextra 879470 879535 -28125121 + (TAA)n Simple_repeat Simple_repeat 2 68 0 7 591 22 35 0 0 chrUextra 879728 879757 -28124899 + AT_rich Low_complexity Low_complexity 1 29 0 7 591 2803 19 0 0 chrUextra 880128 880443 -28124213 + PROTOP_A DNA P 791 1105 0 7 591 664 131 145 16 chrUextra 880493 880617 -28124039 - DNAREP1_DM LINE Penelope -128 466 327 7 591 674 204 14 7 chrUextra 880650 880788 -28123868 - Invader3_I LTR Gypsy -4068 820 682 7 591 23 0 0 0 chrUextra 880798 880821 -28123835 + AT_rich Low_complexity Low_complexity 1 23 0 7 591 5591 0 0 2 chrUextra 881497 882098 -28122558 - DOC LINE Jockey -4122 603 4 7 591 1047 101 41 10 chrUextra 882093 882264 -28122392 - DMRT1B LINE R1 -4850 333 1 7 591 458 47 0 72 chrUextra 882457 882526 -28122130 - QUASIMODO_LTR LTR Gypsy -593 65 2 7 591 728 64 9 0 chrUextra 882872 882981 -28121675 + TRANSIB2 DNA Transib 2111 2220 -624 7 591 642 146 8 23 chrUextra 883331 883469 -28121187 + TRANSIB2 DNA Transib 2186 2323 -691 7 591 1666 70 48 0 chrUextra 883500 883730 -28120926 + TRANSIB2 DNA Transib 2604 2844 0 7 591 2949 109 0 0 chrUextra 883731 884133 -28120523 - DMRT1B LINE R1 -1287 3896 3495 7 591 5192 23 16 3 chrUextra 884233 884852 -28119804 - G_DM LINE Jockey -3718 628 2 7 591 2457 59 0 10 chrUextra 884831 885141 -28119515 - FW_DM LINE Jockey -4385 307 1 7 591 3074 28 0 0 chrUextra 885149 885501 -28119155 + R1_DM LINE R1 1377 1728 -3628 7 591 11021 22 19 1 chrUextra 885601 886868 -28117788 - R1_DM LINE R1 -1170 4186 2897 7 591 3321 14 0 0 chrUextra 886968 887333 -28117323 - SSU-rRNA_Dme rRNA rRNA -1201 794 430 7 591 627 104 29 172 chrUextra 887393 887567 -28117089 - MICROPIA_LTR LTR Gypsy -172 304 156 7 591 228 163 0 20 chrUextra 887588 887638 -28117018 - MICROPIA_I LTR Gypsy 0 4476 4428 7 591 21 0 0 0 chrUextra 888200 888221 -28116435 + AT_rich Low_complexity Low_complexity 1 21 0 7 591 2202 30 13 3 chrUextra 888335 888634 -28116022 + MDG1_I LTR Gypsy 5995 6296 -300 7 591 775 89 7 46 chrUextra 888603 888756 -28115900 + MDG1_I LTR Gypsy 6450 6596 0 7 591 339 105 0 0 chrUextra 888772 888829 -28115827 + (TAA)n Simple_repeat Simple_repeat 3 59 0 7 591 1965 89 78 3 chrUextra 888831 889113 -28115543 + MDG1_LTR LTR Gypsy 94 396 -46 7 591 804 275 25 59 chrUextra 889701 890057 -28114599 + FROGGER_I LTR Copia 1694 2037 -40 7 591 28 0 0 0 chrUextra 890600 890628 -28114028 + AT_rich Low_complexity Low_complexity 1 28 0 7 591 2533 124 14 32 chrUextra 891068 892331 -28112325 - DMSAT6 Satellite Satellite -3 1240 1 7 591 5480 22 25 3 chrUextra 892432 893084 -28111572 + FW_DM LINE Jockey 4027 4692 0 7 591 273 29 0 0 chrUextra 893088 893122 -28111534 - R1_DM LINE R1 -3966 1390 1357 7 591 4832 31 2 2 chrUextra 893122 893696 -28110960 - R1_DM LINE R1 -4150 1206 633 7 591 2269 205 19 42 chrUextra 895228 895769 -28108887 - Gypsy12_LTR LTR Gypsy -1808 528 1 7 591 4567 91 73 17 chrUextra 895768 896424 -28108232 - Gypsy12_I LTR Gypsy 0 5546 4854 7 591 8104 31 2 48 chrUextra 896524 897597 -28107059 - NINJA_I LTR Pao -4987 1024 1 7 591 1560 53 0 5 chrUextra 897598 897787 -28106869 - NINJA_LTR LTR Pao -1 316 129 7 591 230 154 0 0 chrUextra 897902 897941 -28106715 - Stalker2_I LTR Gypsy -7073 329 291 7 591 28 48 0 0 chrUextra 897948 897990 -28106666 + AT_rich Low_complexity Low_complexity 1 42 0 7 591 3406 38 0 2 chrUextra 898042 898442 -28106214 - STALKER4_LTR LTR Gypsy -3 399 1 7 591 6008 35 7 4 chrUextra 898442 899149 -28105507 - R1_DM LINE R1 -2213 3143 2435 7 591 2279 0 0 0 chrUextra 899254 899501 -28105155 + Gypsy2_I LTR Gypsy 5889 6135 0 7 591 3325 0 0 0 chrUextra 899501 899854 -28104802 + Gypsy2_LTR LTR Gypsy 1 353 0 7 591 547 308 21 45 chrUextra 899884 900173 -28104483 - HMSBEAGLE_I LTR Gypsy -3604 2925 2644 7 591 281 232 0 0 chrUextra 900442 900511 -28104145 - HMSBEAGLE_I LTR Gypsy -4097 2432 2364 7 591 1265 77 0 0 chrUextra 900611 900805 -28103851 + S_DM DNA Tc1 1543 1736 0 7 591 1255 42 6 0 chrUextra 900805 900964 -28103692 + CIRCE LINE Composite 4493 4652 -1704 7 591 421 66 0 0 chrUextra 900965 901026 -28103630 + CIRCE LINE Composite 4561 4621 -1735 7 591 1187 56 0 0 chrUextra 901022 901165 -28103491 + CIRCE LINE Composite 4838 4980 -1376 7 591 1338 55 0 0 chrUextra 901355 901518 -28103138 - R1_DM LINE R1 -4037 1319 1157 7 591 2871 49 0 6 chrUextra 901520 901872 -28102784 - R1_DM LINE R1 -4745 611 262 7 591 4681 18 0 39 chrUextra 901972 902544 -28102112 - G_DM LINE Jockey -392 3954 3405 7 591 1247 42 0 0 chrUextra 902540 902683 -28101973 - G_DM LINE Jockey -1178 3168 3026 7 591 4766 25 2 0 chrUextra 902675 903233 -28101423 - G_DM LINE Jockey -1713 2633 2075 7 591 2154 139 232 0 chrUextra 903334 904011 -28100645 - DMRT1B LINE R1 -380 4803 3968 7 591 4522 43 0 10 chrUextra 904014 904594 -28100062 + TRANSIB2 DNA Transib 10 583 -2261 7 591 10816 28 24 1 chrUextra 904694 905954 -28098702 + R1_DM LINE R1 1439 2727 -2629 7 591 6108 98 0 0 chrUextra 906054 906854 -28097802 - Gypsy12_I LTR Gypsy -2058 3488 2689 7 591 324 125 0 0 chrUextra 906863 906911 -28097745 - Gypsy12_I LTR Gypsy -3094 2452 2405 7 591 2811 117 2 0 chrUextra 906917 907311 -28097345 - Gypsy12_I LTR Gypsy -3468 2078 1684 7 591 635 0 0 0 chrUextra 907411 907484 -28097172 - TABOR_I LTR Gypsy -6263 73 1 7 591 4737 0 0 0 chrUextra 907484 907990 -28096666 - TABOR_LTR LTR Gypsy 0 506 1 7 591 6154 9 0 0 chrUextra 907990 908668 -28095988 - DMRT1B LINE R1 -355 4828 4151 7 591 3945 183 40 30 chrUextra 908768 910024 -28094632 + SAR_DM Satellite Satellite 1 1269 -203 7 591 5485 228 15 10 chrUextra 910124 911380 -28093276 + G_DM LINE Jockey 2449 3711 -635 7 591 5017 203 15 48 chrUextra 911492 912735 -28091921 + TAHRE LINE telomeric 6 1207 -9256 7 591 5357 3 2 2 chrUextra 912836 913417 -28091239 - R2_DM LINE R2 -3025 582 2 7 591 6371 1 0 0 chrUextra 913414 914091 -28090565 + R2_DM LINE R2 1742 2418 -1189 7 591 1472 15 25 20 chrUextra 914191 914390 -28090266 + NTS_DM Other Other 41 240 0 7 591 1975 4 17 13 chrUextra 914390 914629 -28090027 + NTS_DM Other Other 1 240 0 7 591 815 0 0 0 chrUextra 914629 914716 -28089940 + NTS_DM Other Other 1 87 -153 7 591 6531 7 0 0 chrUextra 914716 915445 -28089211 + G6_DM LINE Jockey 1 729 -1313 7 591 2831 58 117 0 chrUextra 915545 915939 -28088717 + PROTOP DNA P 60 499 -3981 7 591 2671 52 265 10 chrUextra 915963 916538 -28088118 + PROTOP DNA P 2910 3631 -849 7 591 1236 134 29 8 chrUextra 916536 916776 -28087880 + PROTOP_A DNA P 740 984 -121 7 591 4605 4 0 0 chrUextra 916920 917427 -28087229 + DM176_LTR LTR Gypsy 1 507 0 7 73 919 0 194 0 chrUextra 917427 917540 -28087116 + ACCORD_LTR LTR Gypsy 422 558 0 7 592 5439 7 3 3 chrUextra 917540 918152 -28086504 + ACCORD_I LTR Gypsy 1 612 -5676 7 592 238 170 0 54 chrUextra 918331 918387 -28086269 - MINOS DNA Tc1 -452 1323 1271 7 592 510 33 0 0 chrUextra 919445 919505 -28085151 - PROTOP_B DNA P 0 1153 1094 7 592 2435 303 45 30 chrUextra 919639 920757 -28083899 - Invader6_I LTR Gypsy -1540 2559 1426 7 592 832 121 0 8 chrUextra 920732 920857 -28083799 + Gypsy7_I LTR Gypsy 3177 3300 -1684 7 592 3456 3 5 0 chrUextra 920958 921343 -28083313 + G2_DM LINE Jockey 2715 3101 -1 7 592 4371 65 16 23 chrUextra 921592 922210 -28082446 - TRANSIB4 DNA Transib 0 2610 1997 7 592 5408 48 0 0 chrUextra 922310 922951 -28081705 + HELENA_RT LINE Jockey 677 1317 0 7 592 2010 34 216 17 chrUextra 922989 923290 -28081366 - DMCR1A LINE CR1 -4108 362 2 7 592 270 232 0 0 chrUextra 923677 923733 -28080923 - DM176_I LTR Gypsy -3724 2696 2641 7 592 2410 60 3 75 chrUextra 923708 924053 -28080603 - CIRCE LINE Composite -5064 1292 973 7 592 6049 31 0 0 chrUextra 924209 924914 -28079742 - G2_DM LINE Jockey -10 3092 2388 7 592 26 82 0 0 chrUextra 925037 925098 -28079558 + AT_rich Low_complexity Low_complexity 1 61 0 7 592 291 268 51 10 chrUextra 925250 925348 -28079308 - DMCR1A LINE CR1 -616 3854 3753 7 592 375 280 17 0 chrUextra 925362 925480 -28079176 - DMCR1A LINE CR1 -776 3694 3575 7 592 1098 152 22 5 chrUextra 926392 926577 -28078079 + Invader1_LTR LTR Gypsy 236 423 0 7 592 420 329 40 47 chrUextra 926716 927038 -28077618 + MICROPIA_I LTR Gypsy 772 1091 -3385 7 592 426 292 229 29 chrUextra 927060 927502 -28077154 + MICROPIA_I LTR Gypsy 1150 1679 -2797 7 592 860 71 9 0 chrUextra 927505 927618 -28077038 - DMCR1A LINE CR1 0 4470 4357 7 592 2413 4 0 0 chrUextra 927718 927978 -28076678 - Invader4_LTR LTR Gypsy -86 260 1 7 592 6588 8 29 0 chrUextra 927978 928969 -28075687 - Invader4_I LTR Gypsy 0 2413 1268 7 592 2936 84 75 30 chrUextra 929075 929567 -28075089 - BATUMI_I LTR Pao -7449 514 1 7 592 2360 28 0 27 chrUextra 929567 929863 -28074793 - BATUMI_I LTR Pao -679 7284 6997 7 592 3786 28 22 4 chrUextra 929858 930320 -28074336 - G_DM LINE Jockey -3696 650 181 7 592 10615 3 24 0 chrUextra 930420 931612 -28073044 + DM176_I LTR Gypsy 2460 3679 -2741 7 592 553 0 0 0 chrUextra 931610 931671 -28072985 + DM176_I LTR Gypsy 4297 4357 -2063 7 592 7472 22 83 0 chrUextra 931771 933021 -28071635 - R1_DM LINE R1 -1586 3770 2417 7 592 4192 54 0 4 chrUextra 933138 933644 -28071012 - G5_DM LINE Jockey -4349 507 4 7 592 941 67 0 17 chrUextra 933671 933862 -28070794 + RSP Satellite Satellite 1 187 -2 7 592 823 125 18 16 chrUextra 933888 934371 -28070285 + RSP Satellite Satellite 1 484 0 7 592 4731 8 21 0 chrUextra 934523 935046 -28069610 + Copia2_I LTR Copia 3526 4059 -103 7 592 6119 9 0 6 chrUextra 935047 935720 -28068936 + MICROPIA_I LTR Gypsy 2941 3609 -867 7 592 1559 269 62 26 chrUextra 937234 937765 -28066891 - TOM_I LTR Gypsy -5147 965 416 7 592 24 0 0 0 chrUextra 938319 938343 -28066313 + AT_rich Low_complexity Low_complexity 1 24 0 7 592 1691 30 15 16 chrUextra 938518 938783 -28065873 + LSU-rRNA_Dme rRNA rRNA 3691 3900 0 7 592 266 196 0 19 chrUextra 938884 938936 -28065720 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 7 592 266 196 0 19 chrUextra 938976 939028 -28065628 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 7 592 266 196 0 19 chrUextra 939068 939120 -28065536 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 7 592 277 176 0 19 chrUextra 939151 939203 -28065453 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 7 592 2957 6 0 0 chrUextra 939212 939533 -28065123 + MAX_LTR LTR Pao 1 321 0 7 592 2178 4 0 0 chrUextra 939533 939767 -28064889 + MAX_I LTR Pao 1 234 -7680 7 592 4459 279 7 7 chrUextra 939867 941112 -28063544 + TIRANT_I LTR Gypsy 3640 4884 -2808 7 592 4491 95 2 5 chrUextra 941214 941820 -28062836 - R1_DM LINE R1 -3645 1711 1108 7 592 3079 107 72 104 chrUextra 941834 942459 -28062197 - R1_DM LINE R1 -4681 675 71 7 592 5630 28 53 3 chrUextra 942561 943243 -28061413 - R1_DM LINE R1 -255 5101 4386 7 592 5092 26 0 0 chrUextra 943233 943808 -28060848 - R1_DM LINE R1 -736 4620 4046 7 592 5675 2 3 0 chrUextra 943908 944521 -28060135 + LSU-rRNA_Dme rRNA rRNA 2037 2651 -1249 7 592 402 0 0 0 chrUextra 944519 944563 -28060093 + R1_DM LINE R1 4708 4751 -605 7 592 5522 3 0 0 chrUextra 944560 945155 -28059501 + R1_DM LINE R1 4232 4826 -530 7 592 430 74 0 0 chrUextra 945255 945309 -28059347 + Gypsy6A_LTR LTR Gypsy 249 302 -118 7 592 34 24 0 0 chrUextra 945536 945577 -28059079 + AT_rich Low_complexity Low_complexity 1 41 0 7 592 1907 324 15 6 chrUextra 945851 946501 -28058155 + Gypsy6_I LTR Gypsy 945 1600 -5412 7 592 2154 99 6 0 chrUextra 946601 946913 -28057743 + IDEFIX_I LTR Gypsy 3604 3917 -1711 7 592 5570 55 17 9 chrUextra 946907 947658 -28056998 + IDEFIX_I LTR Gypsy 4192 4948 -680 7 592 1455 61 0 5 chrUextra 947649 947847 -28056809 + IDEFIX_I LTR Gypsy 780 976 -4652 7 592 2533 122 13 25 chrUextra 947947 949192 -28055464 + DMSAT6 Satellite Satellite 1 1229 -97 7 592 11137 23 0 2 chrUextra 949292 950537 -28054119 - G5_DM LINE Jockey -674 4182 2941 7 592 7404 57 8 5 chrUextra 950637 951882 -28052774 - HETA LINE telomeric -2166 3915 2897 7 592 8164 83 32 11 chrUextra 953326 954465 -28050191 - BS LINE Jockey -3956 1170 9 7 592 4095 163 146 36 chrUextra 954677 955776 -28048880 + IDEFIX_I LTR Gypsy 282 1501 -4127 7 592 593 144 135 0 chrUextra 955810 955914 -28048742 + IDEFIX_I LTR Gypsy 2442 2559 -3069 7 592 11343 5 2 9 chrUextra 956015 957258 -28047398 - TART LINE telomeric -310 14167 12934 7 592 1136 66 12 35 chrUextra 957363 957536 -28047120 - DMCR1A LINE CR1 -47 4423 4255 7 592 1511 66 0 10 chrUextra 957531 957730 -28046926 - DMCR1A LINE CR1 -2868 1602 1406 7 592 1619 64 18 0 chrUextra 957723 957943 -28046713 - FB4_DM DNA Tc1 -3865 224 1 7 592 2211 166 95 5 chrUextra 957952 958375 -28046281 + FW_DM LINE Jockey 1056 1516 -3176 7 592 910 117 64 12 chrUextra 958424 958597 -28046059 + DM297_LTR LTR Gypsy 1 182 -232 7 592 3608 5 0 0 chrUextra 958701 959089 -28045567 + DMRT1B LINE R1 4796 5183 0 7 592 5441 19 111 7 chrUextra 959088 959944 -28044712 - R1_DM LINE R1 -760 4596 3652 7 592 653 23 11 23 chrUextra 960044 960132 -28044524 - RSP Satellite Satellite -31 87 1 7 592 9461 41 35 2 chrUextra 960159 961287 -28043369 + G5_DM LINE Jockey 4 1169 -3687 7 592 2733 100 19 34 chrUextra 961387 962630 -28042026 + DMSAT6 Satellite Satellite 1 1223 -97 7 592 3928 110 8 12 chrUextra 962730 963319 -28041337 + HMSBEAGLE_I LTR Gypsy 2814 3400 -3129 7 592 4266 73 134 40 chrUextra 963302 963973 -28040683 + DMCR1A LINE CR1 1600 2333 -2137 7 592 5355 20 62 2 chrUextra 964075 964716 -28039940 + FW_DM LINE Jockey 600 1279 -3413 7 592 5068 38 17 0 chrUextra 964714 965316 -28039340 + FW_DM LINE Jockey 366 977 -3715 7 592 756 295 55 40 chrUextra 965423 965748 -28038908 + DM297_I LTR Gypsy 2372 2800 -3367 7 592 1470 29 63 0 chrUextra 965748 965953 -28038703 + TLD2 Unknown Unknown 1 218 0 7 592 756 295 55 40 chrUextra 965953 966081 -28038575 + DM297_I LTR Gypsy 2801 2972 -3195 7 592 245 175 73 73 chrUextra 966104 966172 -28038484 + Gypsy4_I LTR Gypsy 4324 4391 -1897 7 592 2712 106 20 27 chrUextra 966758 967983 -28036673 - DMSAT6 Satellite Satellite -128 1217 1 7 592 4587 48 24 15 chrUextra 968099 969143 -28035513 + PROTOP DNA P 192 1105 0 7 592 358 335 34 34 chrUextra 969143 969339 -28035317 + Gypsy6_I LTR Gypsy 1434 1629 -5383 7 592 1040 61 8 0 chrUextra 969440 969571 -28035085 - G5_DM LINE Jockey -752 4104 3973 7 592 10023 19 9 0 chrUextra 969561 970681 -28033975 - G5_DM LINE Jockey -1041 3815 2686 7 592 10709 33 12 1 chrUextra 972122 973361 -28031295 - R1_DM LINE R1 -3003 2353 1101 7 592 6253 9 17 1 chrUextra 973461 974159 -28030497 + LSU-rRNA_Dme rRNA rRNA 1946 2654 -1246 7 592 5017 2 0 0 chrUextra 974161 974700 -28029956 + R1_DM LINE R1 1672 2210 -3146 7 592 1483 6 0 0 chrUextra 974800 974960 -28029696 + Gypsy4_I LTR Gypsy 2134 2293 -3995 7 592 3015 9 63 0 chrUextra 974960 975161 -28029495 + Stalker3_LTR LTR Gypsy 1 201 -171 7 592 207 0 0 0 chrUextra 975161 975184 -28029472 + (ATAAG)n Simple_repeat Simple_repeat 2 24 0 7 592 3015 9 63 0 chrUextra 975184 975332 -28029324 + Stalker3_LTR LTR Gypsy 202 370 -2 7 592 3415 18 28 0 chrUextra 975332 975721 -28028935 + Gypsy4_I LTR Gypsy 2290 2689 -3599 7 592 2928 21 0 3 chrUextra 975706 976039 -28028617 + Gypsy4_I LTR Gypsy 3200 3531 -2757 7 592 3190 133 14 43 chrUextra 976164 976720 -28027936 + Gypsy12_LTR LTR Gypsy 1774 2313 -23 7 592 3670 43 48 18 chrUextra 976779 977277 -28027379 + PROTOP_A DNA P 1 513 -592 7 592 329 288 30 22 chrUextra 977489 977624 -28027032 - Gypsy11_LTR LTR Gypsy -207 245 110 7 592 3253 11 0 0 chrUextra 977628 977981 -28026675 + Gypsy2_LTR LTR Gypsy 1 353 0 7 592 6167 25 27 7 chrUextra 977981 978717 -28025939 + Gypsy2_I LTR Gypsy 1 751 -5384 7 592 2812 229 91 72 chrUextra 978821 980055 -28024601 - TART LINE telomeric -3895 10582 9326 7 592 274 342 84 39 chrUextra 980464 980796 -28023860 + BLASTOPIA_I LTR Gypsy 4134 4480 -1 7 592 10790 32 1 1 chrUextra 981493 982731 -28021925 + R1_DM LINE R1 1094 2331 -3025 7 592 11015 11 1 13 chrUextra 982831 984069 -28020587 + DM1731_I LTR Copia 728 1950 -2026 7 592 8390 54 11 8 chrUextra 984169 985212 -28019444 - R1_DM LINE R1 -4266 1090 45 7 592 1422 19 0 0 chrUextra 985251 985406 -28019250 - R1_DM LINE R1 0 5356 5202 7 592 10848 14 24 0 chrUextra 985506 986742 -28017914 - FW_DM LINE Jockey -807 3885 2620 7 592 4701 21 70 11 chrUextra 986842 987414 -28017242 - FW_DM LINE Jockey -1954 2738 2133 7 592 2851 63 6 6 chrUextra 987403 987767 -28016889 - R1_DM LINE R1 -4970 386 23 7 592 2525 31 0 7 chrUextra 987788 988078 -28016578 - R1_DM LINE R1 0 5356 5069 7 592 1386 30 0 12 chrUextra 988182 988350 -28016306 - CIRCE LINE Composite -2676 3680 3515 7 592 1560 278 46 6 chrUextra 988347 988821 -28015835 + Gypsy4_I LTR Gypsy 2032 2524 -3764 7 592 22 0 0 0 chrUextra 990606 990628 -28014028 + AT_rich Low_complexity Low_complexity 1 22 0 7 592 2620 115 30 19 chrUextra 990848 992083 -28012573 - DMSAT6 Satellite Satellite -61 1247 1 7 592 11103 2 8 0 chrUextra 992183 993418 -28011238 + DM176_I LTR Gypsy 3494 4738 -1682 7 592 320 127 56 0 chrUextra 993561 993632 -28011024 + ROO_I LTR Pao 820 894 -7362 7 592 9564 31 1 0 chrUextra 993621 994753 -28009903 + ROO_I LTR Pao 1303 2435 -5821 7 592 5305 24 48 0 chrUextra 994853 996087 -28008569 - R1_DM LINE R1 -2069 3287 1964 7 592 26 30 0 0 chrUextra 996190 996223 -28008433 + AT_rich Low_complexity Low_complexity 1 33 0 7 592 748 46 0 0 chrUextra 996247 996334 -28008322 - PROTOP_B DNA P -650 503 417 7 592 3515 48 196 0 chrUextra 996339 996835 -28007821 - DOC3_DM LINE Jockey 0 4740 4148 7 592 5156 29 5 0 chrUextra 996827 997421 -28007235 - DOC3_DM LINE Jockey -738 4002 3406 7 592 2197 174 202 36 chrUextra 997521 998322 -28006334 + TART LINE telomeric 9279 10486 -3991 7 592 34 24 0 0 chrUextra 998331 998372 -28006284 + AT_rich Low_complexity Low_complexity 1 41 0 7 592 5015 20 0 0 chrUextra 998855 999405 -28005251 - G_DM LINE Jockey -869 3477 2928 7 592 5251 13 0 2 chrUextra 999404 1000000 -28004656 - G_DM LINE Jockey -1867 2479 1885 7 592 778 0 11 0 chrUextra 1000000 1000088 -28004568 - G_DM LINE Jockey -2462 1884 1796 7 592 4117 189 26 29 chrUextra 1000188 1001421 -28003235 - SAR_DM Satellite Satellite -1034 1230 1 7 592 2393 265 81 28 chrUextra 1001522 1002751 -28001905 - ROVER-I_DM LTR Gypsy -4939 1645 351 7 592 3101 0 0 0 chrUextra 1002853 1003184 -28001472 + Invader4_LTR LTR Gypsy 16 346 0 7 592 8249 6 9 0 chrUextra 1003184 1004084 -28000572 + Invader4_I LTR Gypsy 1 908 -1505 7 592 2608 40 0 0 chrUextra 1004184 1004487 -28000169 - PROTOP DNA P -4177 303 1 7 592 299 295 0 0 chrUextra 1004700 1004795 -27999861 + TOM_I LTR Gypsy 1685 1779 -4333 7 592 1080 36 0 0 chrUextra 1004811 1004951 -27999705 - G4_DM LINE Jockey 0 3856 3717 7 592 1196 29 0 0 chrUextra 1004949 1005089 -27999567 - G4_DM LINE Jockey -267 3589 3450 7 592 587 282 3 27 chrUextra 1005109 1005408 -27999248 + DM297_I LTR Gypsy 1891 2182 -3985 7 592 3902 32 92 5 chrUextra 1005515 1006169 -27998487 + R1_DM LINE R1 4646 5356 0 7 592 4333 53 32 11 chrUextra 1006176 1006744 -27997912 + R1_DM LINE R1 269 848 -4508 7 592 1679 145 173 14 chrUextra 1007065 1007530 -27997126 - DMRT1B LINE R1 -340 4843 3968 7 592 4206 49 0 9 chrUextra 1007533 1008073 -27996583 + TRANSIB2 DNA Transib 10 544 -2300 7 592 406 175 0 64 chrUextra 1008173 1008283 -27996373 + XDMR_DM Unknown Unknown 258 360 0 7 592 3950 186 60 30 chrUextra 1008192 1009400 -27995256 - SAR_DM Satellite Satellite -354 1243 1 7 592 4989 2 2 2 chrUextra 1009501 1010053 -27994603 - DOC6_DM LINE Jockey -3670 552 1 7 592 4006 174 0 1 chrUextra 1010055 1010712 -27993944 - TIRANT_I LTR Gypsy -5432 2260 1605 7 592 1321 95 141 15 chrUextra 1011248 1011496 -27993160 + ACCORD2_I LTR Gypsy 2895 3120 -4092 7 592 2840 0 6 0 chrUextra 1011506 1011825 -27992831 - QUASIMODO_LTR LTR Gypsy -337 321 1 7 592 817 112 0 0 chrUextra 1011850 1011984 -27992672 - S_DM DNA Tc1 0 1736 1603 7 592 371 161 0 0 chrUextra 1011997 1012053 -27992603 - S_DM DNA Tc1 -374 1362 1307 7 592 7634 42 13 86 chrUextra 1012164 1013382 -27991274 + BATUMI_I LTR Pao 243 1371 -6592 7 592 3580 56 2 5 chrUextra 1013482 1013930 -27990726 - R1_DM LINE R1 -4839 517 71 7 592 682 36 0 0 chrUextra 1013934 1014017 -27990639 - R1_DM LINE R1 -1414 3942 3860 7 592 5788 45 4 6 chrUextra 1013997 1014708 -27989948 - R1_DM LINE R1 -1949 3407 2698 7 592 16862 133 53 5 chrUextra 1014808 1017360 -27987296 - TART_B1 LINE telomeric -4843 5811 3137 7 592 6873 54 21 3 chrUextra 1017460 1018685 -27985971 - HETA LINE telomeric -2166 3915 2928 7 592 6170 27 46 8 chrUextra 1018785 1019531 -27985125 + R1_DM LINE R1 4293 5066 -290 7 592 973 53 0 0 chrUextra 1019528 1019642 -27985014 + R1_DM LINE R1 5243 5356 0 7 592 2636 54 6 6 chrUextra 1019675 1020010 -27984646 + R1_DM LINE R1 1 335 -5021 7 592 5110 14 14 0 chrUextra 1020110 1020688 -27983968 - PROTOP_A DNA P -519 586 1 7 592 4523 75 119 6 chrUextra 1020688 1021333 -27983323 + HMSBEAGLE_I LTR Gypsy 1314 2031 -4498 7 592 9903 32 34 0 chrUextra 1021482 1022659 -27981997 - DMCR1A LINE CR1 0 4470 3254 7 592 3804 47 15 0 chrUextra 1023213 1023681 -27980975 + DOC3_DM LINE Jockey 1421 1895 -2845 7 592 2606 30 7 0 chrUextra 1023680 1023982 -27980674 + DOC3_DM LINE Jockey 2199 2502 -2238 7 592 2986 25 22 3 chrUextra 1024083 1024438 -27980218 - BATUMI_I LTR Pao -7601 362 1 7 592 1964 24 70 16 chrUextra 1024438 1024696 -27979960 - BATUMI_LTR LTR Pao 0 272 1 7 592 21 0 0 0 chrUextra 1024833 1024854 -27979802 + AT_rich Low_complexity Low_complexity 1 21 0 7 592 1925 273 132 10 chrUextra 1025482 1026318 -27978338 + BS LINE Jockey 1861 2798 -2328 7 592 9399 23 45 0 chrUextra 1026728 1027950 -27976706 - FW_DM LINE Jockey -780 3912 2636 7 592 212 0 0 35 chrUextra 1028083 1028112 -27976544 + (TTA)n Simple_repeat Simple_repeat 2 29 0 7 592 1193 139 64 5 chrUextra 1028142 1028345 -27976311 - DNAREP1_DM LINE Penelope -358 236 22 7 592 1396 59 0 0 chrUextra 1029372 1029541 -27975115 - G5_DM LINE Jockey -4684 172 4 7 592 919 87 0 12 chrUextra 1029568 1029738 -27974918 + RSP Satellite Satellite 1 168 0 7 592 805 115 10 19 chrUextra 1029767 1030289 -27974367 + RSP Satellite Satellite 1 517 -8 7 592 807 117 17 17 chrUextra 1030315 1030547 -27974109 + RSP Satellite Satellite 1 232 0 7 592 2423 67 17 17 chrUextra 1030694 1031045 -27973611 - QUASIMODO_I LTR Gypsy -1461 4599 4249 7 592 2095 139 11 28 chrUextra 1031223 1031579 -27973077 - GTWIN_LTR LTR Gypsy -145 350 1 7 592 2814 39 0 0 chrUextra 1031579 1031914 -27972742 - QUASIMODO_I LTR Gypsy -1808 4252 3918 7 592 210 147 14 29 chrUextra 1032410 1032480 -27972176 + (TAAA)n Simple_repeat Simple_repeat 1 69 0 7 592 8209 94 65 0 chrUextra 1033336 1034556 -27970100 - TART_B1 LINE telomeric -7382 3272 1974 7 592 3132 212 26 22 chrUextra 1034656 1035875 -27968781 - SAR_DM Satellite Satellite -218 1223 1 7 592 6558 19 0 0 chrUextra 1035975 1036726 -27967930 - ROO_I LTR Pao -3313 4943 4193 7 592 3948 16 2 0 chrUextra 1036733 1037178 -27967478 + FW_DM LINE Jockey 1748 2193 -2499 7 592 2173 316 38 30 chrUextra 1037294 1038357 -27966299 - NOMAD_I LTR Gypsy -3468 3104 2034 7 592 6057 40 54 30 chrUextra 1038613 1039433 -27965223 + Transib5 DNA Transib 1572 2410 -591 7 592 837 79 18 0 chrUextra 1039436 1039550 -27965106 - DMCR1A LINE CR1 -2 4468 4353 7 592 1366 44 222 4 chrUextra 1039552 1039831 -27964825 - DMCR1A LINE CR1 -236 4234 3895 7 592 710 201 13 25 chrUextra 1039936 1040094 -27964562 + HETRP_DM Satellite Satellite 1529 1684 -188 7 592 705 191 17 58 chrUextra 1040195 1040367 -27964289 + HETRP_DM Satellite Satellite 1518 1682 -190 7 592 704 226 6 30 chrUextra 1040497 1040666 -27963990 + HETRP_DM Satellite Satellite 1518 1682 -190 7 592 715 190 11 69 chrUextra 1040769 1040944 -27963712 + HETRP_DM Satellite Satellite 1518 1682 -190 7 592 282 29 0 0 chrUextra 1041061 1041096 -27963560 + (GA)n Simple_repeat Simple_repeat 2 36 0 7 592 236 132 0 0 chrUextra 1041096 1041134 -27963522 + HETRP_DM Satellite Satellite 1549 1586 -286 7 592 1154 21 107 0 chrUextra 1041979 1042119 -27962537 + PROTOP_B DNA P 1 155 -998 7 592 2515 82 3 26 chrUextra 1042117 1042466 -27962190 + Gypsy12_I LTR Gypsy 4657 4997 -549 7 592 3551 177 86 2 chrUextra 1042567 1043783 -27960873 + ROVER-I_DM LTR Gypsy 3966 5283 -1301 7 592 21 57 0 0 chrUextra 1044384 1044419 -27960237 + AT_rich Low_complexity Low_complexity 1 35 0 7 592 1077 196 64 0 chrUextra 1044569 1044819 -27959837 - DNAREP1_DM LINE Penelope -328 266 1 7 592 5262 29 30 2 chrUextra 1045201 1046418 -27958238 - MDG1_I LTR Gypsy -1359 5237 3987 7 592 6181 7 49 0 chrUextra 1046518 1047214 -27957442 + Gypsy6_I LTR Gypsy 6281 7010 -2 7 592 3709 15 0 0 chrUextra 1047217 1047624 -27957032 + Gypsy6_LTR LTR Gypsy 1 407 0 7 592 994 0 0 9 chrUextra 1047624 1047735 -27956921 + SSU-rRNA_Dme rRNA rRNA 1822 1931 -64 7 9 6032 5 3 0 chrUextra 1048382 1049052 -27955604 + Gypsy5_I LTR Gypsy 5622 6293 -216 7 593 5354 50 0 5 chrUextra 1050467 1051137 -27953519 + DOC3_DM LINE Jockey 185 851 -3889 7 593 2075 36 4 0 chrUextra 1051134 1051383 -27953273 + DOC3_DM LINE Jockey 1016 1265 -3475 7 593 2356 41 34 0 chrUextra 1051388 1051680 -27952976 + DOC3_DM LINE Jockey 1647 1948 -2792 7 593 9042 45 59 6 chrUextra 1051782 1052997 -27951659 + DOC3_DM LINE Jockey 3326 4704 -36 7 593 3520 20 0 0 chrUextra 1053097 1053494 -27951162 + R1_DM LINE R1 4960 5356 0 7 593 6042 56 65 0 chrUextra 1053527 1054311 -27950345 + R1_DM LINE R1 1 835 -4521 7 593 1040 21 135 7 chrUextra 1054411 1054552 -27950104 + ROO_I LTR Pao 5128 5286 -2970 7 593 4579 43 19 2 chrUextra 1054532 1055097 -27949559 + ROO_I LTR Pao 5430 6004 -2252 7 593 362 24 0 0 chrUextra 1055094 1055135 -27949521 + ROO_I LTR Pao 6222 6262 -1994 7 593 4114 30 0 0 chrUextra 1055130 1055625 -27949031 + ROO_I LTR Pao 6445 6939 -1317 7 593 2649 205 163 4 chrUextra 1057041 1058160 -27946496 - DMRT1A LINE R1 -261 4922 3640 7 593 189 74 0 0 chrUextra 1058160 1058187 -27946469 + (TATG)n Simple_repeat Simple_repeat 3 29 0 7 593 1300 158 90 5 chrUextra 1058187 1058249 -27946407 - DMRT1A LINE R1 -1544 3639 3558 7 593 1684 311 12 11 chrUextra 1058351 1058923 -27945733 - NINJA_I LTR Pao -4454 1557 985 7 593 680 89 9 65 chrUextra 1060165 1060273 -27944383 - Baggins1 LINE LOA -262 5191 5090 7 593 442 88 0 0 chrUextra 1060273 1060330 -27944326 - Baggins1 LINE LOA -606 4847 4791 7 593 621 35 0 140 chrUextra 1060775 1060875 -27943781 - Baggins1 LINE LOA 0 5453 5368 7 593 4380 33 16 0 chrUextra 1060993 1061583 -27943073 + PROTOP_A DNA P 570 1105 0 7 593 27 29 0 0 chrUextra 1061834 1061868 -27942788 + AT_rich Low_complexity Low_complexity 1 34 0 7 593 9745 34 46 7 chrUextra 1062286 1063497 -27941159 - CIRCE LINE Composite -2944 3412 2155 7 593 1755 43 197 0 chrUextra 1063598 1063832 -27940824 + Baggins1 LINE LOA 5062 5341 -112 7 593 1309 68 288 18 chrUextra 1063827 1064053 -27940603 + ROOA_I LTR Pao 1489 1775 -5074 7 593 931 59 8 0 chrUextra 1064048 1064166 -27940490 + ROOA_I LTR Pao 1962 2080 -4769 7 593 3819 57 377 0 chrUextra 1064156 1064808 -27939848 + Baggins1 LINE LOA 588 1485 -3968 7 593 5679 13 0 0 chrUextra 1064908 1065526 -27939130 + MICROPIA_I LTR Gypsy 1902 2519 -1957 7 593 5452 5 0 7 chrUextra 1065521 1066118 -27938538 + MICROPIA_I LTR Gypsy 2812 3404 -1072 7 593 1928 32 0 0 chrUextra 1066218 1066439 -27938217 + R1_DM LINE R1 3439 3659 -1697 7 593 4554 29 2 0 chrUextra 1066437 1066960 -27937696 + R1_DM LINE R1 4833 5356 0 7 593 3288 65 58 0 chrUextra 1066993 1067426 -27937230 + R1_DM LINE R1 1 458 -4898 7 593 5797 200 37 9 chrUextra 1067534 1068737 -27935919 + TAHRE LINE telomeric 587 1822 -8641 7 593 4279 187 17 27 chrUextra 1068837 1070046 -27934610 - SAR_DM Satellite Satellite -259 1197 1 7 593 4714 22 2 11 chrUextra 1071455 1072001 -27932655 + R1_DM LINE R1 4526 5066 -290 7 593 1022 26 0 0 chrUextra 1071998 1072112 -27932544 + R1_DM LINE R1 5243 5356 0 7 593 4064 66 34 4 chrUextra 1072133 1072664 -27931992 + R1_DM LINE R1 23 569 -4787 7 593 2609 51 3 0 chrUextra 1072764 1073080 -27931576 - Baggins1 LINE LOA -346 5107 4791 7 593 2647 27 109 40 chrUextra 1073354 1073701 -27930955 - Baggins1 LINE LOA 0 5453 5083 7 593 2450 11 0 0 chrUextra 1073704 1073973 -27930683 - NINJA_I LTR Pao -1290 4721 4453 7 593 2537 68 0 3 chrUextra 1074073 1074405 -27930251 + IDEFIX_I LTR Gypsy 3854 4184 -1444 7 593 2420 18 18 0 chrUextra 1074405 1074690 -27929966 + IDEFIX_LTR LTR Gypsy 1 290 -304 7 593 4510 72 10 5 chrUextra 1074693 1075282 -27929374 - BS LINE Jockey -3928 1198 607 7 593 3422 138 7 14 chrUextra 1075384 1075952 -27928704 + TAHRE LINE telomeric 9884 10447 -16 7 593 361 77 0 19 chrUextra 1075942 1075995 -27928661 + TAHRE LINE telomeric 10406 10457 -6 7 593 3509 86 6 24 chrUextra 1075983 1076590 -27928066 + HETA LINE telomeric 1 631 -5450 7 593 224 185 31 0 chrUextra 1076742 1076807 -27927849 + (TAA)n Simple_repeat Simple_repeat 2 68 0 7 593 220 141 46 15 chrUextra 1077267 1077332 -27927324 + (TAA)n Simple_repeat Simple_repeat 2 68 0 7 593 22 35 0 0 chrUextra 1077525 1077554 -27927102 + AT_rich Low_complexity Low_complexity 1 29 0 7 593 46 19 0 0 chrUextra 1077847 1077900 -27926756 + AT_rich Low_complexity Low_complexity 1 53 0 7 593 1126 28 0 20 chrUextra 1078000 1078146 -27926510 - BLASTOPIA_LTR LTR Gypsy -132 143 1 7 593 5753 2 56 0 chrUextra 1078146 1079209 -27925447 - BLASTOPIA_I LTR Gypsy 0 4481 3359 7 593 2142 254 4 9 chrUextra 1079309 1079838 -27924818 + TABOR_I LTR Gypsy 3783 4308 -2028 7 593 2783 203 16 26 chrUextra 1079830 1080517 -27924139 + Stalker2_I LTR Gypsy 5041 5720 -1682 7 593 223 240 0 0 chrUextra 1081744 1081794 -27922862 + CT-rich Low_complexity Low_complexity 1 50 0 7 593 2581 107 23 21 chrUextra 1081925 1083133 -27921523 + DMSAT6 Satellite Satellite 1 1210 -48 7 593 3770 61 4 6 chrUextra 1083233 1083712 -27920944 - R1_DM LINE R1 -3982 1374 897 7 593 1228 81 70 0 chrUextra 1083709 1083894 -27920762 - R1_DM LINE R1 -4566 790 593 7 593 1359 85 16 0 chrUextra 1083892 1084081 -27920575 - R1_DM LINE R1 -5164 192 1 7 593 2881 12 6 3 chrUextra 1084114 1084441 -27920215 - R1_DM LINE R1 0 5356 5029 7 593 10941 3 0 0 chrUextra 1084541 1085749 -27918907 - ACCORD_I LTR Gypsy -3744 2544 1337 7 593 324 250 45 0 chrUextra 1085879 1085967 -27918689 - DIVER2_I LTR Pao -34 4113 4022 7 593 301 114 0 0 chrUextra 1086173 1086217 -27918439 + DNAREP1_DM LINE Penelope 1 44 -550 7 593 6281 63 48 8 chrUextra 1086222 1087057 -27917599 - M4DM DNA Transib -336 1099 232 7 593 5548 24 20 2 chrUextra 1087157 1088365 -27916291 + FW_DM LINE Jockey 737 1962 -2384 7 593 1094 29 0 0 chrUextra 1088465 1088603 -27916053 + DOC2_DM LINE Jockey 4654 4791 -2 7 593 757 99 0 0 chrUextra 1089291 1089392 -27915264 + Gypsy9_LTR LTR Gypsy 1 101 -235 7 593 1105 76 159 74 chrUextra 1089395 1089652 -27915004 + Gypsy9_I LTR Gypsy 75 353 -4324 7 593 1974 13 4 13 chrUextra 1089772 1090002 -27914654 + BATUMI_I LTR Pao 6774 7001 -962 7 593 7968 68 62 4 chrUextra 1089840 1090979 -27913677 - BATUMI_I LTR Pao -1063 6851 5414 7 593 3061 135 16 0 chrUextra 1091079 1091530 -27913126 + Gypsy_I LTR Gypsy 6050 6507 0 7 593 437 149 0 0 chrUextra 1091530 1091597 -27913059 + Gypsy_LTR LTR Gypsy 1 67 -415 7 593 449 88 44 0 chrUextra 1091594 1091662 -27912994 + DNAREP1_DM LINE Penelope 522 592 -2 7 593 423 117 0 0 chrUextra 1091953 1092013 -27912643 + FB4_DM DNA Tc1 1018 1077 -3012 7 593 924 128 5 11 chrUextra 1092038 1092227 -27912429 - S_DM DNA Tc1 0 1736 1549 7 593 2463 68 0 3 chrUextra 1092385 1092697 -27911959 + BS3_DM LINE Jockey 106 416 -1374 7 593 1607 69 10 0 chrUextra 1092693 1092896 -27911760 + BS3_DM LINE Jockey 526 730 -1060 7 593 757 22 0 0 chrUextra 1092908 1092997 -27911659 + BS3_DM LINE Jockey 1458 1546 -244 7 593 3999 90 5 19 chrUextra 1093005 1093591 -27911065 + DM297_I LTR Gypsy 2179 2756 -3411 7 593 10452 15 3 7 chrUextra 1093691 1094896 -27909760 - Gypsy4_I LTR Gypsy -942 5346 4146 7 593 4889 0 2 0 chrUextra 1094996 1095526 -27909130 + IVK_DM LINE I 4870 5400 -2 7 593 192 40 0 0 chrUextra 1095964 1095989 -27908667 + (TTA)n Simple_repeat Simple_repeat 1 25 0 7 593 30 27 0 0 chrUextra 1096106 1096143 -27908513 + AT_rich Low_complexity Low_complexity 1 37 0 7 593 10351 27 2 2 chrUextra 1096303 1097506 -27907150 - R1_DM LINE R1 -1267 4089 2886 7 593 3444 0 0 0 chrUextra 1097606 1097978 -27906678 + Copia_I LTR Copia 4222 4593 0 7 593 2302 0 30 0 chrUextra 1097978 1098246 -27906410 + Copia_LTR LTR Copia 1 276 0 7 593 10246 23 30 1 chrUextra 1098910 1100112 -27904544 - FW_DM LINE Jockey -1199 3493 2257 7 593 10489 28 0 0 chrUextra 1100214 1101418 -27903238 + G2_DM LINE Jockey 1656 2859 -243 7 593 4964 4 0 2 chrUextra 1101518 1102063 -27902593 - FW_DM LINE Jockey -4148 544 1 7 593 5684 3 1 0 chrUextra 1102074 1102720 -27901936 + STALKER4_I LTR Gypsy 2909 3555 -2975 7 593 1153 288 14 9 chrUextra 1103097 1103447 -27901209 - BS LINE Jockey -2393 2733 2382 7 593 674 297 8 28 chrUextra 1103436 1103689 -27900967 - BS LINE Jockey -2860 2266 2019 7 593 272 243 14 0 chrUextra 1103718 1103788 -27900868 + DIVER2_I LTR Pao 3058 3128 -1019 7 593 482 314 66 9 chrUextra 1103791 1104003 -27900653 + DIVER2_I LTR Pao 3432 3655 -492 7 593 5226 2 0 2 chrUextra 1104126 1104695 -27899961 - POGO DNA Pogo -1553 568 1 7 593 201 121 0 0 chrUextra 1104836 1104869 -27899787 + (TC)n Simple_repeat Simple_repeat 1 33 0 7 593 5453 3 0 0 chrUextra 1105429 1106023 -27898633 - QUASIMODO_LTR LTR Gypsy -64 594 1 7 593 555 0 130 5 chrUextra 1106243 1106629 -27898027 + (TA)n Simple_repeat Simple_repeat 1 434 0 7 593 830 139 0 17 chrUextra 1106740 1107032 -27897624 + RSP Satellite Satellite 1 287 0 7 593 921 126 8 17 chrUextra 1107072 1107815 -27896841 + RSP Satellite Satellite 1 736 0 7 593 310 149 0 0 chrUextra 1107855 1107902 -27896754 + RSP Satellite Satellite 72 118 0 7 593 4564 23 4 0 chrUextra 1108033 1108552 -27896104 + R1_DM LINE R1 4480 5000 -356 7 593 579 54 0 0 chrUextra 1108555 1108629 -27896027 + R1_DM LINE R1 95 168 -5188 7 593 4877 40 16 11 chrUextra 1108627 1109235 -27895421 + R1_DM LINE R1 638 1248 -4108 7 593 10351 30 25 0 chrUextra 1109335 1110537 -27894119 - R1_DM LINE R1 -2734 2622 1391 7 593 270 54 0 0 chrUextra 1111024 1111061 -27893595 - PROTOP_B DNA P 0 1153 1117 7 593 3756 77 72 102 chrUextra 1111126 1111838 -27892818 - PROTOP_B DNA P 0 1153 464 7 593 8314 70 52 29 chrUextra 1111938 1113138 -27891518 + Gypsy7_I LTR Gypsy 2118 3345 -1639 7 593 5127 60 42 39 chrUextra 1113238 1113935 -27890721 - CIRCE LINE Composite -5657 699 1 7 593 4016 36 48 0 chrUextra 1113962 1114438 -27890218 - CIRCE LINE Composite -79 6277 5779 7 593 1252 147 130 44 chrUextra 1114753 1115053 -27889603 - DNAREP1_DM LINE Penelope -201 393 83 7 593 231 37 0 0 chrUextra 1115142 1115169 -27889487 - DNAREP1_DM LINE Penelope -532 62 36 7 593 3353 8 3 3 chrUextra 1115838 1116230 -27888426 + DOC LINE Jockey 4334 4725 0 7 593 241 0 0 0 chrUextra 1116230 1116256 -27888400 - ROO_I LTR Pao -4037 4219 4194 7 593 1005 33 0 0 chrUextra 1116264 1116384 -27888272 + FW_DM LINE Jockey 1748 1867 -2825 7 593 2327 178 20 81 chrUextra 1116389 1117031 -27887625 - TART_B1 LINE telomeric -9020 1634 1032 7 593 3485 77 24 61 chrUextra 1117150 1117692 -27886964 + Gypsy8_I LTR Gypsy 1207 1728 -2619 7 593 533 117 8 48 chrUextra 1117676 1117802 -27886854 - DMSAT6 Satellite Satellite -71 399 279 7 593 3732 32 0 0 chrUextra 1117903 1118336 -27886320 + DMCR1A LINE CR1 2096 2528 -1942 7 593 6655 99 64 69 chrUextra 1118436 1119616 -27885040 - R1_DM LINE R1 -4181 1175 1 7 593 821 21 0 0 chrUextra 1119735 1119830 -27884826 - Stalker2_I LTR Gypsy -7307 95 1 7 593 3872 0 0 2 chrUextra 1119830 1120255 -27884401 - Stalker2_LTR LTR Gypsy 0 424 1 7 593 564 204 15 29 chrUextra 1120304 1120440 -27884216 - HETRP_DM Satellite Satellite -190 1682 1549 7 593 210 37 0 0 chrUextra 1120440 1120467 -27884189 + (TC)n Simple_repeat Simple_repeat 2 28 0 7 593 366 162 112 0 chrUextra 1120615 1120695 -27883961 + DNAREP1_DM LINE Penelope 67 155 -439 7 593 1345 181 103 37 chrUextra 1121088 1121438 -27883218 - Gypsy12A_LTR LTR Gypsy -1760 520 148 7 593 5868 47 74 5 chrUextra 1121438 1122233 -27882423 - PROTOP_B DNA P -38 1115 266 7 593 192 135 0 0 chrUextra 1122918 1122955 -27881701 + (A)n Simple_repeat Simple_repeat 1 37 0 7 593 23 54 0 0 chrUextra 1123354 1123391 -27881265 + AT_rich Low_complexity Low_complexity 1 37 0 7 593 1894 40 0 13 chrUextra 1123632 1123862 -27880794 + PROTOP DNA P 4254 4480 0 7 593 802 126 154 0 chrUextra 1123862 1124005 -27880651 - DNAREP1_DM LINE Penelope -20 574 410 7 593 515 100 0 0 chrUextra 1123999 1124069 -27880587 - DNAREP1_DM LINE Penelope -490 104 35 7 593 2274 258 0 0 chrUextra 1124930 1125485 -27879171 - G6_DM LINE Jockey -849 1193 639 7 593 356 0 0 0 chrUextra 1125483 1125524 -27879132 - ROVER-LTR_DM LTR Gypsy -326 41 1 7 593 21 0 0 0 chrUextra 1125554 1125575 -27879081 + AT_rich Low_complexity Low_complexity 1 21 0 7 593 5434 8 0 0 chrUextra 1126228 1126833 -27877823 + DOC LINE Jockey 4121 4725 0 7 593 2831 183 7 12 chrUextra 1126830 1127426 -27877230 + SAR_DM Satellite Satellite 218 810 -662 7 593 11129 2 11 0 chrUextra 1127526 1128723 -27875933 + MICROPIA_I LTR Gypsy 1991 3200 -1276 7 593 21 89 0 0 chrUextra 1129501 1129557 -27875099 + AT_rich Low_complexity Low_complexity 1 56 0 7 593 23 68 0 0 chrUextra 1129595 1129639 -27875017 + AT_rich Low_complexity Low_complexity 1 44 0 7 593 28 71 0 0 chrUextra 1129685 1129741 -27874915 + AT_rich Low_complexity Low_complexity 1 56 0 7 593 1023 51 36 0 chrUextra 1129880 1130017 -27874639 - PROTOP_A DNA P -592 513 372 7 593 26 82 0 0 chrUextra 1130445 1130506 -27874150 + AT_rich Low_complexity Low_complexity 1 61 0 7 593 279 303 0 0 chrUextra 1131244 1131310 -27873346 - DIVER2_I LTR Pao -165 3982 3917 7 593 477 307 76 55 chrUextra 1131427 1132009 -27872647 - Gypsy5_I LTR Gypsy -2192 4317 4028 7 593 1591 293 15 14 chrUextra 1132025 1132614 -27872042 - ZAM_I LTR Gypsy -3244 4246 3657 7 593 10053 24 50 1 chrUextra 1132714 1133910 -27870746 - DMCR1A LINE CR1 -972 3498 2244 7 593 10710 5 8 1 chrUextra 1134010 1135206 -27869450 - Invader2_I LTR Gypsy -2673 1919 716 7 593 10379 9 19 0 chrUextra 1136602 1137798 -27866858 - QUASIMODO_I LTR Gypsy -4126 1934 716 7 593 754 34 0 0 chrUextra 1138423 1138511 -27866145 - NINJA_LTR LTR Pao -1 316 229 7 593 343 269 26 53 chrUextra 1138513 1138627 -27866029 + Gypsy4_I LTR Gypsy 946 1132 -5156 7 593 1098 121 88 16 chrUextra 1138651 1138845 -27865811 + DMCR1A LINE CR1 454 661 -3809 7 593 4463 195 20 22 chrUextra 1139200 1140388 -27864268 + SAR_DM Satellite Satellite 1 1185 -208 7 593 5078 2 0 2 chrUextra 1140488 1141058 -27863598 + HMSBEAGLE_I LTR Gypsy 55 623 -5906 7 593 5945 0 0 0 chrUextra 1141045 1141683 -27862973 + HMSBEAGLE_I LTR Gypsy 3065 3702 -2827 7 593 5513 28 78 1 chrUextra 1141783 1142978 -27861678 - R1_DM LINE R1 -1137 4219 2933 7 593 5422 12 5 0 chrUextra 1143078 1143677 -27860979 + Copia2_I LTR Copia 2607 3208 -954 7 593 552 42 0 0 chrUextra 1143683 1143754 -27860902 + (TTA)n Simple_repeat Simple_repeat 2 72 0 7 593 585 52 32 75 chrUextra 1143758 1143945 -27860711 + (TAA)n Simple_repeat Simple_repeat 1 179 0 7 593 345 86 77 35 chrUextra 1143919 1144088 -27860568 + (TATAA)n Simple_repeat Simple_repeat 3 178 0 7 593 1209 78 0 0 chrUextra 1144093 1144272 -27860384 + (TTA)n Simple_repeat Simple_repeat 2 180 0 7 593 691 197 13 26 chrUextra 1144383 1144539 -27860117 + HETRP_DM Satellite Satellite 1529 1682 -190 7 593 683 208 13 25 chrUextra 1144658 1144816 -27859840 + HETRP_DM Satellite Satellite 1529 1684 -188 7 593 677 205 11 67 chrUextra 1144917 1145095 -27859561 + HETRP_DM Satellite Satellite 1518 1685 -187 7 593 192 40 0 0 chrUextra 1145236 1145261 -27859395 + (GA)n Simple_repeat Simple_repeat 2 26 0 7 593 564 199 22 30 chrUextra 1145261 1145396 -27859260 + HETRP_DM Satellite Satellite 1549 1682 -190 7 593 192 40 0 0 chrUextra 1145540 1145565 -27859091 + (GA)n Simple_repeat Simple_repeat 2 26 0 7 593 228 154 51 0 chrUextra 1145717 1145756 -27858900 + Invader6_I LTR Gypsy 670 710 -3389 7 593 537 328 17 4 chrUextra 1145961 1146197 -27858459 + MICROPIA_I LTR Gypsy 907 1145 -3331 7 593 5084 55 15 8 chrUextra 1146201 1146860 -27857796 + S_DM DNA Tc1 1 664 -1072 7 593 4493 112 50 1 chrUextra 1146960 1147615 -27857041 - Gypsy_I LTR Gypsy -358 6149 5463 7 593 246 139 0 0 chrUextra 1147616 1147659 -27856997 + G6_DM LINE Jockey 1 43 -1999 7 593 8739 22 8 84 chrUextra 1148254 1149448 -27855208 + G_DM LINE Jockey 8 1111 -3235 7 593 2003 87 45 65 chrUextra 1149548 1149904 -27854752 - ROVER-LTR_DM LTR Gypsy -18 349 1 7 593 2159 21 0 0 chrUextra 1149904 1150146 -27854510 - CIRCE LINE Composite -1983 4373 4132 7 593 5013 32 7 5 chrUextra 1150148 1150741 -27853915 - CIRCE LINE Composite -2704 3652 3059 7 593 4677 72 15 5 chrUextra 1150841 1151451 -27853205 - Gypsy7_I LTR Gypsy -1701 3283 2668 7 593 4363 64 29 3 chrUextra 1151450 1152034 -27852622 - Gypsy7_I LTR Gypsy -2993 1991 1393 7 593 2063 93 142 27 chrUextra 1152345 1152710 -27851946 + FW3_DM LINE Jockey 95 501 -2631 7 593 657 326 21 49 chrUextra 1152710 1152997 -27851659 + NOMAD_I LTR Gypsy 6162 6440 -132 7 593 850 167 30 143 chrUextra 1152968 1153233 -27851423 + Gypsy12A_LTR LTR Gypsy 1180 1414 -866 7 593 832 123 8 0 chrUextra 1153429 1153559 -27851097 + DM297_I LTR Gypsy 4901 5031 -1136 7 593 193 0 94 0 chrUextra 1153749 1153781 -27850875 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 7 593 850 167 30 143 chrUextra 1154146 1154411 -27850245 - Gypsy12A_LTR LTR Gypsy -866 1414 1180 7 593 552 311 25 59 chrUextra 1154382 1154618 -27850038 - NOMAD_I LTR Gypsy -132 6440 6213 7 593 3429 22 180 0 chrUextra 1154720 1155258 -27849398 + R1_DM LINE R1 4057 4691 -665 7 593 1650 54 0 5 chrUextra 1155248 1155454 -27849202 + R1_DM LINE R1 5034 5238 -118 7 593 3500 65 2 23 chrUextra 1155437 1155913 -27848743 + R1_DM LINE R1 224 689 -4667 7 593 1491 58 16 0 chrUextra 1156278 1156467 -27848189 - PROTOP_B DNA P 0 1153 962 7 593 1025 138 76 76 chrUextra 1156510 1156800 -27847856 - Gypsy_LTR LTR Gypsy -46 436 147 7 593 5701 3 0 0 chrUextra 1157306 1157919 -27846737 + LSU-rRNA_Dme rRNA rRNA 1975 2587 -1313 7 593 5384 7 0 0 chrUextra 1157910 1158498 -27846158 + R2_DM LINE R2 2522 3109 -498 7 593 10263 22 29 0 chrUextra 1158598 1159790 -27844866 + FW_DM LINE Jockey 1551 2776 -1916 7 593 611 186 45 57 chrUextra 1160130 1160340 -27844316 + DMTOM1_LTR LTR Gypsy 284 488 -19 7 593 426 100 14 28 chrUextra 1160331 1160403 -27844253 + DMTOM1_LTR LTR Gypsy 340 410 0 7 593 524 81 207 0 chrUextra 1160689 1160776 -27843880 + DNAREP1_DM LINE Penelope 426 530 -64 7 593 5513 192 15 17 chrUextra 1161189 1162372 -27842284 - HETA LINE telomeric -1815 4266 3086 7 593 3019 99 49 11 chrUextra 1162472 1163115 -27841541 + DMCR1A LINE CR1 3135 4121 -349 7 593 514 239 6 77 chrUextra 1163783 1163964 -27840692 - TOM_I LTR Gypsy -4630 1482 1315 7 593 2135 254 45 41 chrUextra 1164116 1164919 -27839737 - TOM_I LTR Gypsy -5087 1025 199 7 593 10687 6 18 1 chrUextra 1165054 1166245 -27838411 - BS LINE Jockey -2307 2819 1609 7 593 2655 92 45 12 chrUextra 1166346 1167535 -27837121 - DMSAT6 Satellite Satellite 0 1227 1 7 593 3280 46 39 0 chrUextra 1167635 1168233 -27836423 - DOC2_DM LINE Jockey -4133 660 6 7 593 1898 281 32 7 chrUextra 1168239 1168824 -27835832 - TOM_I LTR Gypsy -851 5261 4662 7 593 10622 1 19 0 chrUextra 1168925 1170115 -27834541 - ACCORD_I LTR Gypsy -817 5471 4260 7 593 4426 99 37 0 chrUextra 1170216 1170839 -27833817 + IDEFIX_I LTR Gypsy 1329 1974 -3654 7 593 5085 15 2 0 chrUextra 1171511 1172099 -27832557 + PROTOP_A DNA P 517 1105 0 7 593 5074 30 27 0 chrUextra 1172102 1172694 -27831962 + DMCR1A LINE CR1 1642 2249 -2221 7 593 3237 58 25 0 chrUextra 1172837 1173236 -27831420 - DMCR1A LINE CR1 -3459 1011 603 7 593 731 138 65 0 chrUextra 1173238 1173376 -27831280 - G3_DM LINE Jockey -1467 3138 2992 7 593 2637 96 14 24 chrUextra 1174083 1175268 -27829388 - DMSAT6 Satellite Satellite -5 1173 1 7 593 5197 0 2 2 chrUextra 1175372 1175933 -27828723 + SSU-rRNA_Dme rRNA rRNA 1265 1825 -170 7 593 2198 108 57 62 chrUextra 1175933 1176337 -27828319 + Gypsy6_LTR LTR Gypsy 1 402 -5 7 593 335 233 53 126 chrUextra 1176353 1176559 -27828097 + Gypsy3_I LTR Gypsy 27 217 -5960 7 593 1417 136 58 14 chrUextra 1176660 1176936 -27827720 - DNAREP1_DM LINE Penelope -306 288 1 7 593 502 265 68 18 chrUextra 1176933 1177151 -27827505 - Gypsy_I LTR Gypsy -4497 2010 1797 7 593 271 314 12 0 chrUextra 1177447 1177533 -27827123 - Gypsy_DS LTR Gypsy -6048 1474 1388 7 593 332 212 11 34 chrUextra 1177614 1177702 -27826954 - Gypsy6_LTR LTR Gypsy -168 239 154 7 593 5931 1 0 3 chrUextra 1177948 1178607 -27826049 + G6_DM LINE Jockey 1375 2031 -11 7 593 505 167 0 11 chrUextra 1178625 1178716 -27825940 - HETRP_DM Satellite Satellite -254 1618 1529 7 593 747 184 12 58 chrUextra 1178839 1179012 -27825644 - HETRP_DM Satellite Satellite -190 1682 1518 7 74 4764 22 0 4 chrUextra 1179236 1179784 -27824872 - PROTOP DNA P -3934 546 1 7 594 470 117 0 13 chrUextra 1180542 1180620 -27824036 + DNAREP1_DM LINE Penelope 354 430 -164 7 594 371 92 0 167 chrUextra 1180639 1180717 -27823939 - Invader1_LTR LTR Gypsy 0 423 359 7 594 2799 76 14 0 chrUextra 1180715 1181069 -27823587 - Invader1_I LTR Gypsy -2361 825 467 7 594 562 134 10 10 chrUextra 1181084 1181182 -27823474 - Invader1_LTR LTR Gypsy -90 333 236 7 594 545 137 9 89 chrUextra 1181189 1181301 -27823355 - Invader1_LTR LTR Gypsy -320 103 1 7 594 367 172 58 0 chrUextra 1181342 1181429 -27823227 - DNAREP1_DM LINE Penelope 0 594 503 7 594 1560 9 0 0 chrUextra 1181812 1182026 -27822630 + (TTATA)n Simple_repeat Simple_repeat 1 214 0 7 594 2409 36 103 0 chrUextra 1182026 1182327 -27822329 + DM1731_LTR LTR Copia 5 336 0 7 594 945 9 9 0 chrUextra 1182327 1182434 -27822222 + DM1731_I LTR Copia 1 108 -3868 7 594 5030 7 5 9 chrUextra 1182438 1183000 -27821656 + DM1731_I LTR Copia 3326 3885 -91 7 594 5176 156 44 11 chrUextra 1184387 1185574 -27819082 + BATUMI_I LTR Pao 3994 5208 -2706 7 594 336 100 17 0 chrUextra 1185674 1185734 -27818922 - ROVER-I_DM LTR Gypsy -371 6213 6153 7 594 736 218 0 11 chrUextra 1185929 1186105 -27818551 - ROVER-I_DM LTR Gypsy -421 6163 5990 7 594 4069 158 72 4 chrUextra 1186140 1186858 -27817798 - ROVER-I_DM LTR Gypsy -1276 5308 4542 7 594 939 66 16 0 chrUextra 1186960 1187081 -27817575 + DOC3_DM LINE Jockey 1773 1895 -2845 7 594 9035 31 25 4 chrUextra 1187080 1188146 -27816510 + DOC3_DM LINE Jockey 2199 3287 -1453 7 594 5814 13 0 2 chrUextra 1188246 1189432 -27815224 + Invader2_I LTR Gypsy 2793 4062 -530 7 594 1943 0 0 0 chrUextra 1189532 1189740 -27814916 + NOMAD_I LTR Gypsy 6365 6572 0 7 594 3739 5 0 0 chrUextra 1189740 1190145 -27814511 + NOMAD_LTR LTR Gypsy 114 518 0 7 594 1634 322 4 6 chrUextra 1190158 1190708 -27813948 - Gypsy6_I LTR Gypsy -172 6840 6292 7 594 2204 207 24 48 chrUextra 1190818 1191365 -27813291 - Gypsy12_LTR LTR Gypsy -1802 534 1 7 594 4726 83 47 2 chrUextra 1191364 1191988 -27812668 - Gypsy12_I LTR Gypsy 0 5546 4895 7 594 232 330 35 9 chrUextra 1192222 1192335 -27812321 + Copia2_I LTR Copia 116 231 -3931 7 594 2807 170 193 37 chrUextra 1193389 1194303 -27810353 - TART LINE telomeric -6807 7670 6734 7 594 354 192 38 91 chrUextra 1194335 1194492 -27810164 - TART LINE telomeric -8372 6105 6004 7 594 252 277 0 30 chrUextra 1194507 1194574 -27810082 - TART LINE telomeric -10047 607 543 7 594 1989 9 0 0 chrUextra 1194674 1194902 -27809754 + DM297_I LTR Gypsy 5940 6167 0 7 594 3575 5 7 10 chrUextra 1194902 1195317 -27809339 + DM297_LTR LTR Gypsy 1 414 0 7 594 312 266 2 0 chrUextra 1195509 1195604 -27809052 - Gypsy2_I LTR Gypsy -3301 2834 2758 7 594 27 0 0 0 chrUextra 1195618 1195645 -27809011 + AT_rich Low_complexity Low_complexity 1 27 0 7 594 396 182 73 24 chrUextra 1195694 1195858 -27808798 - DMCR1A LINE CR1 -2090 2380 2108 7 594 1321 47 59 0 chrUextra 1195959 1196129 -27808527 - R1_DM LINE R1 -4719 637 458 7 594 3290 16 0 0 chrUextra 1196124 1196495 -27808161 - R1_DM LINE R1 -1107 4249 3879 7 594 4473 28 0 0 chrUextra 1196492 1197001 -27807655 - R1_DM LINE R1 -1714 3642 3134 7 594 1216 52 6 6 chrUextra 1196987 1197143 -27807513 - R1_DM LINE R1 -3063 2293 2138 7 594 9566 28 12 22 chrUextra 1197243 1198427 -27806229 + DOC2_DM LINE Jockey 588 1759 -3034 7 594 1228 260 31 53 chrUextra 1198572 1199059 -27805597 + FROGGER_I LTR Copia 1562 2037 -40 7 594 1587 25 0 0 chrUextra 1199297 1199614 -27805042 + (TTA)n Simple_repeat Simple_repeat 1 317 0 7 594 634 62 268 0 chrUextra 1199614 1199711 -27804945 - IVK_DM LINE I -1235 4167 4045 7 594 1500 6 0 0 chrUextra 1199811 1199976 -27804680 - DOC LINE Jockey -1090 3635 3471 7 594 3049 67 212 4 chrUextra 1199982 1200758 -27803898 - DOC4_DM LINE Jockey -940 1851 914 7 594 2779 290 59 21 chrUextra 1201191 1202279 -27802377 + DMRT1A LINE R1 711 1839 -3344 7 594 656 312 64 9 chrUextra 1203134 1203477 -27801179 + Gypsy5_I LTR Gypsy 2195 2556 -3953 7 594 299 296 0 0 chrUextra 1203471 1203552 -27801104 + Gypsy5_I LTR Gypsy 2747 2827 -3682 7 594 7698 8 25 2 chrUextra 1203662 1204719 -27799937 - DMRT1B LINE R1 -3294 1889 713 7 594 478 0 0 0 chrUextra 1204720 1204774 -27799882 - QUASIMODO_LTR LTR Gypsy -604 54 1 7 594 664 0 0 0 chrUextra 1204774 1204845 -27799811 - QUASIMODO_I LTR Gypsy 0 6060 5990 7 594 6571 28 100 0 chrUextra 1204945 1206128 -27798528 - IDEFIX_I LTR Gypsy -3984 1644 344 7 594 6596 14 14 0 chrUextra 1206228 1206996 -27797660 - STALKER4_I LTR Gypsy -1098 5432 4654 7 594 3828 5 0 5 chrUextra 1206988 1207411 -27797245 - STALKER4_I LTR Gypsy -2290 4240 3820 7 594 3046 20 0 17 chrUextra 1207511 1207872 -27796784 - DM412 LTR Gypsy -6542 355 1 7 594 4149 8 0 66 chrUextra 1207557 1208072 -27796584 - T412LTR LTR LTR 0 481 1 7 594 562 0 0 0 chrUextra 1208793 1208863 -27795793 + TABOR_I LTR Gypsy 6267 6336 0 7 594 4681 6 0 0 chrUextra 1208861 1209367 -27795289 + TABOR_LTR LTR Gypsy 1 506 0 7 594 5224 28 16 0 chrUextra 1209367 1209975 -27794681 + DMCR1A LINE CR1 3143 3760 -710 7 594 3485 109 78 2 chrUextra 1210075 1210607 -27794049 - Invader1_I LTR Gypsy -715 2471 1899 7 594 4562 52 60 23 chrUextra 1210607 1211257 -27793399 + PROTOP DNA P 1 674 -3806 7 594 1006 169 14 34 chrUextra 1211410 1211618 -27793038 - LINEJ1_DM LINE Jockey -2508 2512 2309 7 594 7298 29 53 24 chrUextra 1211627 1212539 -27792117 + DMCR1A LINE CR1 1 938 -3532 7 594 2716 88 23 19 chrUextra 1212639 1213820 -27790836 - DMSAT6 Satellite Satellite -394 1186 1 7 594 2397 15 0 0 chrUextra 1213920 1214192 -27790464 - Copia2_I LTR Copia -3890 272 1 7 594 1717 10 10 0 chrUextra 1214192 1214388 -27790268 - Copia2_LTR_DM LTR Copia 0 198 1 7 594 1467 28 0 0 chrUextra 1214388 1214568 -27790088 + (TAA)n Simple_repeat Simple_repeat 1 180 0 7 594 1383 60 0 0 chrUextra 1214586 1214903 -27789753 + (TAA)n Simple_repeat Simple_repeat 1 317 0 7 594 336 76 105 25 chrUextra 1214907 1215069 -27789587 + (TTATA)n Simple_repeat Simple_repeat 3 177 0 7 594 25 0 0 0 chrUextra 1215076 1215101 -27789555 + AT_rich Low_complexity Low_complexity 1 25 0 7 594 4595 30 15 0 chrUextra 1215201 1215740 -27788916 - DMRT1B LINE R1 -4494 689 143 7 594 271 327 67 36 chrUextra 1216155 1216380 -27788276 + MICROPIA_I LTR Gypsy 1 232 -2181 7 594 4118 193 25 25 chrUextra 1216481 1217661 -27786995 - SAR_DM Satellite Satellite -430 1180 1 7 594 2597 115 11 11 chrUextra 1217765 1218312 -27786344 + G6_DM LINE Jockey 1739 2042 0 7 594 759 178 13 26 chrUextra 1219061 1219217 -27785439 - HETRP_DM Satellite Satellite -190 1682 1529 7 594 744 211 12 18 chrUextra 1219375 1219544 -27785112 - HETRP_DM Satellite Satellite -187 1685 1518 7 594 555 204 15 29 chrUextra 1219674 1219810 -27784846 - HETRP_DM Satellite Satellite -190 1682 1549 7 594 210 37 0 0 chrUextra 1219810 1219837 -27784819 + (TC)n Simple_repeat Simple_repeat 2 28 0 7 594 358 162 112 0 chrUextra 1219985 1220065 -27784591 + DNAREP1_DM LINE Penelope 67 155 -439 7 594 2873 199 2 35 chrUextra 1220321 1220940 -27783716 - TAHRE LINE telomeric -9475 988 391 7 594 4145 81 11 5 chrUextra 1220941 1221500 -27783156 - TART LINE telomeric -3816 10661 10100 7 594 434 69 0 0 chrUextra 1221900 1221958 -27782698 - DNAREP1_DM LINE Penelope -9 585 528 7 594 655 114 14 64 chrUextra 1221958 1222098 -27782558 - DNAREP1_DM LINE Penelope -263 331 199 7 594 480 132 5 45 chrUextra 1222096 1222223 -27782433 - DNAREP1_DM LINE Penelope -312 282 118 7 594 26 0 0 0 chrUextra 1222240 1222266 -27782390 + AT_rich Low_complexity Low_complexity 1 26 0 7 594 2058 182 82 15 chrUextra 1222290 1222753 -27781903 - HOBO DNA hAT 0 3016 2523 7 594 3593 84 96 3 chrUextra 1223173 1223776 -27780880 + TRANSIB2 DNA Transib 2186 2844 0 7 594 1941 107 0 0 chrUextra 1223777 1224058 -27780598 - DMRT1B LINE R1 -1287 3896 3616 7 594 437 19 0 0 chrUextra 1224158 1224211 -27780445 - LOOPER1_DM DNA PiggyBac -1828 53 1 7 594 593 203 12 120 chrUextra 1224378 1224636 -27780020 - ROVER-I_DM LTR Gypsy -6354 230 1 7 594 506 93 0 0 chrUextra 1224721 1224796 -27779860 - ROVER-LTR_DM LTR Gypsy -220 147 73 7 594 2137 111 22 32 chrUextra 1224812 1225323 -27779333 + QUASIMODO_LTR LTR Gypsy 52 621 -37 7 594 3316 145 3 0 chrUextra 1225436 1226001 -27778655 - HETA LINE telomeric -2654 3427 2861 7 594 22 56 0 0 chrUextra 1226027 1226063 -27778593 + AT_rich Low_complexity Low_complexity 1 36 0 7 594 337 109 15 45 chrUextra 1226063 1226130 -27778526 - TART LINE telomeric -6131 8346 8282 7 594 994 61 0 0 chrUextra 1226128 1226260 -27778396 - HETA LINE telomeric -4584 1497 1366 7 594 2322 96 6 6 chrUextra 1226259 1226614 -27778042 - HETA LINE telomeric -106 5975 5621 7 594 3949 17 0 0 chrUextra 1226714 1227195 -27777461 + NINJA_I LTR Pao 749 1229 -4782 7 594 2148 30 26 0 chrUextra 1227198 1227467 -27777189 + NINJA_I LTR Pao 1400 1675 -4336 7 594 3370 28 2 0 chrUextra 1227463 1227891 -27776765 + NINJA_I LTR Pao 1863 2291 -3720 7 594 5317 43 141 3 chrUextra 1227991 1229166 -27775490 + Baggins1 LINE LOA 2936 4272 -1181 7 594 2374 11 0 4 chrUextra 1229268 1229549 -27775107 + STALKER4_LTR LTR Gypsy 123 402 0 7 594 330 25 0 0 chrUextra 1229549 1229576 -27775080 + STALKER4_I LTR Gypsy 1 27 -6503 7 594 289 96 0 37 chrUextra 1229576 1229630 -27775026 + Stalker2_I LTR Gypsy 1 52 -7350 7 594 5114 8 0 8 chrUextra 1229837 1230445 -27774211 + BS LINE Jockey 5 607 -4519 7 594 9750 14 17 1 chrUextra 1230545 1231721 -27772935 + DOC2_DM LINE Jockey 2593 3787 -1006 7 594 6978 91 30 21 chrUextra 1231822 1232957 -27771699 - HMSBEAGLE_I LTR Gypsy -4162 2367 1122 7 594 9857 8 18 1 chrUextra 1233097 1234273 -27770383 + DMRT1A LINE R1 2393 3588 -1595 7 594 2377 10 10 10 chrUextra 1234373 1234675 -27769981 - DM297_LTR LTR Gypsy -112 302 1 7 594 2801 11 0 3 chrUextra 1234675 1235027 -27769629 - DM297_I LTR Gypsy 0 6167 5817 7 594 4226 4 0 0 chrUextra 1235026 1235549 -27769107 - DM297_I LTR Gypsy -4618 1549 1027 7 594 10033 0 6 0 chrUextra 1235649 1236825 -27767831 + Gypsy5_I LTR Gypsy 72 1254 -5255 7 594 9513 21 8 6 chrUextra 1236925 1238100 -27766556 - R1_DM LINE R1 -1260 4096 2920 7 594 2980 0 0 0 chrUextra 1238200 1238551 -27766105 + HMSBEAGLE_I LTR Gypsy 6179 6529 0 7 594 2316 8 0 0 chrUextra 1238551 1238817 -27765839 + DMLTR5 LTR Gypsy 1 266 0 7 594 3838 8 0 62 chrUextra 1238821 1239322 -27765334 - MICROPIA_LTR LTR Gypsy 0 476 7 7 594 394 36 0 0 chrUextra 1239319 1239375 -27765281 + R1_DM LINE R1 652 707 -4649 7 594 3066 207 65 56 chrUextra 1239475 1240219 -27764437 - TAHRE LINE telomeric -2344 8119 7348 7 594 198 0 0 0 chrUextra 1240219 1240241 -27764415 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 7 594 3066 207 65 56 chrUextra 1240241 1240650 -27764006 - TAHRE LINE telomeric -3116 7347 6956 7 594 8026 76 7 4 chrUextra 1240755 1241925 -27762731 - HETA LINE telomeric -1058 5023 3851 7 594 4140 225 41 18 chrUextra 1242026 1243194 -27761462 - TOM_I LTR Gypsy -3070 3042 1848 7 594 4443 213 20 8 chrUextra 1243308 1244433 -27760223 - Stalker2_I LTR Gypsy -2642 4760 3622 7 594 4000 4 0 0 chrUextra 1244573 1245039 -27759617 - DOC LINE Jockey -2168 2557 2092 7 594 934 0 0 0 chrUextra 1245036 1245145 -27759511 - DOC LINE Jockey -1453 3272 3164 7 594 5151 2 2 0 chrUextra 1245143 1245747 -27758909 - DOC LINE Jockey -2642 2083 1479 7 594 9952 11 19 0 chrUextra 1245847 1247021 -27757635 - MICROPIA_I LTR Gypsy -1313 3163 1968 7 594 4319 4 0 0 chrUextra 1247121 1247659 -27756997 + DOC6_DM LINE Jockey 3685 4222 0 7 594 1082 210 62 92 chrUextra 1247655 1248218 -27756438 - Gypsy12A_LTR LTR Gypsy -1274 1006 501 7 594 812 304 137 0 chrUextra 1248584 1249009 -27755647 - OSVALDO_I LTR Gypsy -4172 2481 1999 7 594 4521 30 0 0 chrUextra 1249010 1249569 -27755087 - DMCR1A LINE CR1 -1792 2678 2120 7 594 5393 0 1 1 chrUextra 1249669 1250315 -27754341 - POGO DNA Pogo -41 2080 1435 7 594 4587 2 0 0 chrUextra 1250317 1250843 -27753813 - POGO DNA Pogo -1341 780 255 7 594 498 211 34 28 chrUextra 1250944 1251120 -27753536 + SAR_DM Satellite Satellite 613 789 -683 7 594 965 187 25 18 chrUextra 1251131 1251639 -27753017 + SAR_DM Satellite Satellite 1 511 -680 7 594 1072 164 29 8 chrUextra 1251650 1251896 -27752760 + SAR_DM Satellite Satellite 539 789 -683 7 594 915 165 33 19 chrUextra 1251907 1252117 -27752539 + SAR_DM Satellite Satellite 539 751 -721 7 594 4903 63 8 6 chrUextra 1252217 1252884 -27751772 + HMSBEAGLE_I LTR Gypsy 1503 2170 -4359 7 594 3562 59 98 0 chrUextra 1252879 1253390 -27751266 + HMSBEAGLE_I LTR Gypsy 2428 2988 -3541 7 594 3378 42 4 24 chrUextra 1253490 1253951 -27750705 - CIRCE LINE Composite -4017 2339 1888 7 594 386 347 29 34 chrUextra 1253656 1254035 -27750621 - Ulysses_I LTR Gypsy -1504 4877 4501 7 594 4165 44 17 53 chrUextra 1254027 1254627 -27750029 - CIRCE LINE Composite -4474 1882 1305 7 594 1732 312 3 3 chrUextra 1254792 1255425 -27749231 + Invader1_I LTR Gypsy 1463 2095 -1091 7 594 559 235 7 7 chrUextra 1255425 1255579 -27749077 + Invader1_I LTR Gypsy 2416 2569 -617 7 594 1824 34 4 0 chrUextra 1256035 1256272 -27748384 + TART_B1 LINE telomeric 3391 3628 -7026 7 594 2508 111 40 0 chrUextra 1256270 1256649 -27748007 + TART_B1 LINE telomeric 4415 4808 -5846 7 594 3285 114 64 0 chrUextra 1256648 1257207 -27747449 + TART LINE telomeric 768 1362 -13115 7 594 5167 98 89 90 chrUextra 1257309 1258479 -27746177 + BATUMI_I LTR Pao 562 1730 -6233 7 594 5007 2 5 8 chrUextra 1258579 1259171 -27745485 + DM1731_I LTR Copia 3377 3966 -10 7 594 2570 29 0 0 chrUextra 1259174 1259490 -27745166 + DM1731_LTR LTR Copia 21 336 0 7 594 1255 165 8 4 chrUextra 1259489 1259545 -27745111 + SAR_DM Satellite Satellite 399 594 -878 7 594 1274 79 0 0 chrUextra 1259545 1259734 -27744922 - ARS406_DM Unknown Unknown -164 189 1 7 594 1255 165 8 4 chrUextra 1259734 1259751 -27744905 + SAR_DM Satellite Satellite 595 661 -811 7 594 9796 14 16 1 chrUextra 1259851 1261023 -27743633 - Gypsy2_I LTR Gypsy -2774 3361 2172 7 594 9154 8 28 0 chrUextra 1261123 1262295 -27742361 - QUASIMODO_I LTR Gypsy -325 5735 4531 7 594 5280 18 1 5 chrUextra 1262395 1263052 -27741604 - PROTOP_A DNA P -450 655 1 7 594 2722 9 0 0 chrUextra 1263666 1263998 -27740658 + Copia2_I LTR Copia 3831 4162 0 7 594 1672 5 0 0 chrUextra 1263998 1264196 -27740460 + Copia2_LTR_DM LTR Copia 1 198 0 7 594 1032 24 0 0 chrUextra 1264196 1264319 -27740337 + (TTA)n Simple_repeat Simple_repeat 2 124 0 7 594 2411 94 21 12 chrUextra 1264937 1266080 -27738576 + DMSAT6 Satellite Satellite 1 1152 -29 7 594 426 308 41 0 chrUextra 1266231 1266426 -27738230 + Ulysses_I LTR Gypsy 5641 5843 -538 7 594 348 236 103 49 chrUextra 1266456 1266679 -27737977 + Ulysses_I LTR Gypsy 5894 6128 -253 7 594 360 63 0 0 chrUextra 1267556 1267619 -27737037 + ROO_I LTR Pao 780 842 -7414 7 594 1414 40 20 0 chrUextra 1267644 1267843 -27736813 + ROO_I LTR Pao 941 1143 -7113 7 594 1079 22 0 0 chrUextra 1267844 1267980 -27736676 + ROO_I LTR Pao 1897 2032 -6224 7 594 1750 295 29 19 chrUextra 1268020 1268643 -27736013 - NOMAD_I LTR Gypsy -2102 4470 3842 7 594 1543 154 13 10 chrUextra 1268750 1269059 -27735597 + SAR_DM Satellite Satellite 549 858 -614 7 594 2900 189 20 16 chrUextra 1269079 1269818 -27734838 + SAR_DM Satellite Satellite 1 742 -261 7 594 665 0 12 0 chrUextra 1269838 1269921 -27734735 - ARS406_DM Unknown Unknown -180 173 90 7 594 3412 20 0 0 chrUextra 1270021 1270430 -27734226 - NINJA_I LTR Pao -4136 1875 1467 7 594 5490 32 28 35 chrUextra 1270403 1271191 -27733465 - NINJA_I LTR Pao -5204 807 26 7 594 5291 13 3 2 chrUextra 1271291 1271923 -27732733 - BLASTOPIA_I LTR Gypsy -152 4329 3697 7 594 4858 0 0 0 chrUextra 1271890 1272461 -27732195 - BLASTOPIA_I LTR Gypsy -3457 1024 454 7 594 3984 166 4 7 chrUextra 1272562 1273306 -27731350 - Gypsy5_I LTR Gypsy -3083 3426 2685 7 594 3185 10 5 71 chrUextra 1273296 1273731 -27730925 + MICROPIA_LTR LTR Gypsy 20 425 -51 7 594 419 119 0 0 chrUextra 1273832 1273899 -27730757 + Gypsy8_LTR LTR Gypsy 1 67 -237 7 594 2095 19 0 8 chrUextra 1273996 1274255 -27730401 + CIRCE LINE Composite 3516 3772 -2584 7 594 5598 21 23 39 chrUextra 1274250 1275001 -27729655 + CIRCE LINE Composite 3952 4690 -1666 7 594 2772 273 9 2 chrUextra 1275117 1275929 -27728727 + HMSBEAGLE_I LTR Gypsy 3177 3993 -2536 7 594 349 363 21 12 chrUextra 1275930 1276256 -27728400 + HMSBEAGLE_I LTR Gypsy 4247 4575 -1954 7 594 224 185 31 0 chrUextra 1276875 1276940 -27727716 + (TTA)n Simple_repeat Simple_repeat 2 68 0 7 594 22 35 0 0 chrUextra 1277227 1277256 -27727400 + AT_rich Low_complexity Low_complexity 1 29 0 7 594 208 200 31 0 chrUextra 1277449 1277514 -27727142 + (TTA)n Simple_repeat Simple_repeat 2 68 0 7 594 3877 104 75 20 chrUextra 1277666 1278521 -27726135 + PROTOP_B DNA P 1 888 -217 7 594 313 50 0 0 chrUextra 1278514 1278574 -27726082 + PROTOP_B DNA P 572 631 -522 7 594 1719 44 13 4 chrUextra 1278579 1278808 -27725848 + PROTOP_B DNA P 794 1024 -129 7 594 9965 22 38 1 chrUextra 1278908 1280077 -27724579 - DMCR1A LINE CR1 -959 3511 2300 7 594 3265 41 0 15 chrUextra 1280177 1280571 -27724085 - DMCR1A LINE CR1 -2193 2277 1890 7 594 26 0 0 0 chrUextra 1280579 1280605 -27724051 + AT_rich Low_complexity Low_complexity 1 26 0 7 594 2420 69 0 0 chrUextra 1281445 1281764 -27722892 - IDEFIX_I LTR Gypsy -1481 4147 3829 7 594 1014 305 37 43 chrUextra 1282094 1282604 -27722052 + MICROPIA_I LTR Gypsy 1 507 -3969 7 594 4168 25 0 0 chrUextra 1282713 1283192 -27721464 + Copia2_I LTR Copia 3684 4162 0 7 594 233 29 0 0 chrUextra 1283192 1283224 -27721432 + Copia2_LTR_DM LTR Copia 1 32 -166 7 594 3368 20 60 0 chrUextra 1283224 1283623 -27721033 + Invader1_LTR LTR Gypsy 1 423 0 7 594 1572 0 0 0 chrUextra 1283623 1283793 -27720863 + Copia2_LTR_DM LTR Copia 29 198 0 7 594 1615 64 5 0 chrUextra 1283981 1284183 -27720473 - DMRT1A LINE R1 -144 5039 4837 7 594 3452 20 25 0 chrUextra 1284182 1284582 -27720074 + Transib5 DNA Transib 962 1371 -1630 7 594 4587 41 5 5 chrUextra 1284581 1285149 -27719507 + Transib5 DNA Transib 1684 2251 -750 7 594 4170 11 2 0 chrUextra 1285249 1285715 -27718941 - FW_DM LINE Jockey -1908 2784 2318 7 594 586 15 0 0 chrUextra 1285721 1285789 -27718867 + DIVER2_LTR LTR Pao 318 385 0 7 594 2839 47 140 3 chrUextra 1285789 1286175 -27718481 + DIVER2_I LTR Pao 1 439 -3708 7 594 417 122 68 10 chrUextra 1286530 1286645 -27718011 - Rehavkus-1_DY DNA Tc1 -5388 227 1 7 594 231 196 0 97 chrUextra 1286664 1286726 -27717930 - PROTOP DNA P -232 4248 4192 7 594 418 186 157 0 chrUextra 1286723 1286825 -27717831 - PROTOP DNA P -2895 1585 1468 7 594 272 262 0 48 chrUextra 1286816 1286900 -27717756 - PROTOP DNA P -3950 530 451 7 594 2277 55 30 10 chrUextra 1286939 1287235 -27717421 - PROTOP DNA P -4178 302 1 7 594 52 30 0 0 chrUextra 1287569 1287635 -27717021 + AT_rich Low_complexity Low_complexity 1 66 0 7 594 363 312 16 26 chrUextra 1287784 1287975 -27716681 - Gypsy7_I LTR Gypsy -3630 1354 1166 7 594 6100 44 40 63 chrUextra 1288071 1288950 -27715706 - PROTOP_A DNA P -1 1104 246 7 594 10336 6 52 1 chrUextra 1289050 1290217 -27714439 - Invader3_I LTR Gypsy -2491 2397 1171 7 594 5189 44 0 0 chrUextra 1290317 1290948 -27713708 - NINJA_I LTR Pao -3860 2151 1521 7 594 3896 36 37 44 chrUextra 1290937 1291483 -27713173 - NINJA_I LTR Pao -5396 615 74 7 594 8272 30 50 28 chrUextra 1291586 1292667 -27711989 + PROTOP_A DNA P 1 1105 0 7 594 8843 63 44 0 chrUextra 1292849 1294015 -27710641 + MDG1_I LTR Gypsy 4161 5377 -1219 7 594 8594 26 16 0 chrUextra 1294115 1295116 -27709540 + R1_DM LINE R1 4338 5354 -2 7 594 958 78 8 0 chrUextra 1295151 1295280 -27709376 + R1_DM LINE R1 1 130 -5226 7 594 293 188 62 0 chrUextra 1295592 1295656 -27709000 + Gypsy4_I LTR Gypsy 3517 3584 -2704 7 594 392 339 6 12 chrUextra 1295724 1295894 -27708762 + Gypsy4_I LTR Gypsy 4323 4491 -1797 7 594 1333 132 123 4 chrUextra 1296065 1296309 -27708347 - DNAREP1_DM LINE Penelope -321 273 1 7 594 271 275 10 73 chrUextra 1296380 1296476 -27708180 + Gypsy4_I LTR Gypsy 4926 5005 -1283 7 594 960 192 0 5 chrUextra 1296648 1296836 -27707820 - Gypsy2_I LTR Gypsy -862 5273 5087 7 594 276 320 20 20 chrUextra 1296988 1297090 -27707566 - G2_DM LINE Jockey -2720 382 281 7 594 715 13 0 0 chrUextra 1297910 1297989 -27706667 + DM297_I LTR Gypsy 6089 6167 0 7 594 3614 5 7 7 chrUextra 1297989 1298403 -27706253 + DM297_LTR LTR Gypsy 1 414 0 7 594 5596 25 24 5 chrUextra 1298403 1299075 -27705581 - PROTOP_A DNA P -401 704 20 7 594 3766 69 129 29 chrUextra 1299175 1299787 -27704869 - PROTOP_B DNA P -480 673 1 7 594 420 235 36 73 chrUextra 1299990 1300155 -27704501 - MDG3_I LTR Gypsy -1649 3337 3179 7 594 5911 130 137 22 chrUextra 1300447 1301604 -27703052 - TART LINE telomeric -4001 10476 9188 7 594 2622 100 22 21 chrUextra 1301704 1302868 -27701788 + DMSAT6 Satellite Satellite 1 1165 -18 7 594 3108 303 23 16 chrUextra 1302986 1304093 -27700563 + MICROPIA_I LTR Gypsy 2485 3598 -878 7 594 1852 111 16 60 chrUextra 1304440 1304756 -27699900 - Gypsy6A_LTR LTR Gypsy -118 302 1 7 594 5633 14 0 0 chrUextra 1304756 1305395 -27699261 - STALKER4_I LTR Gypsy -3346 3184 2546 7 594 6514 55 58 9 chrUextra 1305495 1306358 -27698298 - R1_DM LINE R1 -4451 905 1 7 594 2383 11 0 0 chrUextra 1306391 1306653 -27698003 - R1_DM LINE R1 0 5356 5095 7 594 2201 270 2 4 chrUextra 1306758 1307312 -27697344 - Gypsy2_I LTR Gypsy -509 5626 5074 7 594 22 0 0 0 chrUextra 1307343 1307365 -27697291 + AT_rich Low_complexity Low_complexity 1 22 0 7 594 2640 239 4 4 chrUextra 1307366 1307921 -27696735 - Gypsy6_I LTR Gypsy -1714 5298 4744 7 594 4115 2 0 0 chrUextra 1308021 1308464 -27696192 + BS2 LINE Jockey 4279 4721 0 7 594 22 0 0 0 chrUextra 1308464 1308486 -27696170 + AT_rich Low_complexity Low_complexity 1 22 0 7 594 2580 35 3 25 chrUextra 1308603 1308924 -27695732 + NINJA_LTR LTR Pao 1 314 -3 7 594 268 289 22 11 chrUextra 1310037 1310128 -27694528 - Invader4_I LTR Gypsy -539 1874 1783 7 74 2639 35 0 0 chrUextra 1310547 1310864 -27693792 + NINJA_I LTR Pao 5695 6011 0 7 595 2545 41 3 28 chrUextra 1310864 1311188 -27693468 + NINJA_LTR LTR Pao 1 316 -1 7 595 21 0 0 0 chrUextra 1311240 1311261 -27693395 + AT_rich Low_complexity Low_complexity 1 21 0 7 595 5202 3 0 3 chrUextra 1311808 1312379 -27692277 - POGO DNA Pogo -1552 569 1 7 595 2469 191 43 12 chrUextra 1312380 1312964 -27691692 - SAR_DM Satellite Satellite -637 835 234 7 595 1377 53 83 21 chrUextra 1313070 1313262 -27691394 + SSU-rRNA_Dme rRNA rRNA 1670 1873 -122 7 595 1059 46 23 0 chrUextra 1313257 1313388 -27691268 + LSU-rRNA_Dme rRNA rRNA 978 1111 -2789 7 595 353 64 0 0 chrUextra 1313381 1313428 -27691228 + LSU-rRNA_Dme rRNA rRNA 1575 1621 -2279 7 595 2826 52 227 6 chrUextra 1313418 1313885 -27690771 + LSU-rRNA_Dme rRNA rRNA 2009 2578 -1322 7 595 2855 63 9 0 chrUextra 1313883 1314232 -27690424 + R2_DM LINE R2 1649 2000 -1607 7 595 2799 110 145 6 chrUextra 1314332 1314861 -27689795 - TART LINE telomeric -6799 7678 7159 7 595 1957 109 7 7 chrUextra 1314870 1315157 -27689499 - TART LINE telomeric -7457 7020 6734 7 595 617 222 35 22 chrUextra 1315210 1315493 -27689163 - TART LINE telomeric -7836 6641 6501 7 595 268 208 0 0 chrUextra 1315635 1315688 -27688968 + NOMAD_I LTR Gypsy 6520 6572 0 7 595 679 124 214 237 chrUextra 1316036 1316437 -27688219 - DNAREP1_DM LINE Penelope -201 393 2 7 595 268 208 0 0 chrUextra 1316922 1316975 -27687681 + NOMAD_I LTR Gypsy 6520 6572 0 7 595 1014 149 198 63 chrUextra 1317323 1317610 -27687046 - DNAREP1_DM LINE Penelope -201 393 83 7 595 523 33 0 0 chrUextra 1317699 1317760 -27686896 - DNAREP1_DM LINE Penelope -532 62 2 7 595 1297 132 3 172 chrUextra 1318411 1318713 -27685943 + HOBO DNA hAT 23 273 -2743 7 595 2030 97 216 21 chrUextra 1318718 1319091 -27685565 + PROTOP_B DNA P 33 478 -675 7 595 1546 72 10 0 chrUextra 1319068 1319276 -27685380 + HOBO DNA hAT 330 539 -2477 7 595 849 133 86 6 chrUextra 1320362 1320536 -27684120 - DNAREP1_DM LINE Penelope -297 297 110 7 595 8075 45 12 1 chrUextra 1320650 1321641 -27683015 + R1_DM LINE R1 616 1617 -3739 7 595 1266 7 0 0 chrUextra 1321653 1321796 -27682860 + R1_DM LINE R1 2001 2143 -3213 7 595 805 122 4 18 chrUextra 1321903 1322123 -27682533 - RSP Satellite Satellite 0 217 1 7 595 919 93 0 12 chrUextra 1322152 1322322 -27682334 - RSP Satellite Satellite -65 168 1 7 595 6023 44 0 1 chrUextra 1322349 1323056 -27681600 + G5_DM LINE Jockey 4 709 -4147 7 595 4663 31 0 23 chrUextra 1323156 1323716 -27680940 - CIRCE LINE Composite -3139 3217 2671 7 595 5015 29 3 8 chrUextra 1323724 1324316 -27680340 - CIRCE LINE Composite -3814 2542 1954 7 595 6673 34 57 39 chrUextra 1324416 1325283 -27679373 + DMCR1A LINE CR1 2169 3050 -1420 7 595 1277 135 31 6 chrUextra 1325297 1325569 -27679087 - DOC LINE Jockey -1559 3166 2846 7 595 8625 67 11 5 chrUextra 1325676 1326836 -27677820 - R1_DM LINE R1 -3236 2120 93 7 595 251 196 18 0 chrUextra 1326936 1327001 -27677655 - DM297_I LTR Gypsy -3741 2426 2372 7 595 769 39 0 0 chrUextra 1328196 1328300 -27676356 + DOC2_DM LINE Jockey 4689 4792 -1 7 595 760 99 0 0 chrUextra 1328977 1329078 -27675578 + Gypsy9_LTR LTR Gypsy 1 101 -235 7 595 1113 76 159 74 chrUextra 1329081 1329338 -27675318 + Gypsy9_I LTR Gypsy 75 353 -4324 7 595 4698 20 0 2 chrUextra 1329455 1329994 -27674662 + FW_DM LINE Jockey 4155 4692 0 7 595 3554 67 26 2 chrUextra 1329994 1330458 -27674198 - R1_DM LINE R1 -3947 1409 935 7 595 1385 46 0 0 chrUextra 1330440 1330614 -27674042 - R1_DM LINE R1 -4740 616 443 7 595 3493 161 23 32 chrUextra 1330714 1331873 -27672783 - TAHRE LINE telomeric -3748 10729 9854 7 595 5890 173 8 11 chrUextra 1333235 1334390 -27670266 + ROVER-I_DM LTR Gypsy 4082 5232 -1352 7 595 2328 35 0 0 chrUextra 1334490 1334776 -27669880 - PROTOP DNA P -4194 286 1 7 595 260 295 0 0 chrUextra 1334990 1335085 -27669571 + TOM_I LTR Gypsy 1685 1779 -4333 7 595 966 50 0 0 chrUextra 1335126 1335266 -27669390 - G4_DM LINE Jockey 0 3856 3717 7 595 1113 29 0 0 chrUextra 1335264 1335404 -27669252 - G4_DM LINE Jockey -267 3589 3450 7 595 237 298 9 37 chrUextra 1335424 1335640 -27669016 + DM297_I LTR Gypsy 1891 2100 -4067 7 595 683 30 10 0 chrUextra 1335748 1335848 -27668808 + STALKER4_I LTR Gypsy 6430 6530 0 7 595 3177 51 2 14 chrUextra 1335848 1336287 -27668369 + STALKER4_LTR LTR Gypsy 1 392 -10 7 595 2252 100 15 30 chrUextra 1336291 1336904 -27667752 - DMSAT6 Satellite Satellite -66 603 1 7 595 2112 45 3 6 chrUextra 1337006 1337296 -27667360 + Gypsy6A_LTR LTR Gypsy 36 408 -12 7 595 6256 28 23 55 chrUextra 1337296 1338164 -27666492 + Gypsy12_LTR LTR Gypsy 1 840 -1496 7 595 764 134 0 0 chrUextra 1338264 1338383 -27666273 - DMRT1B LINE R1 -5064 119 1 7 595 854 91 314 8 chrUextra 1338585 1338830 -27665826 - DMCR1A LINE CR1 -4065 405 86 7 595 235 295 84 33 chrUextra 1339170 1339384 -27665272 - Invader2_I LTR Gypsy -2256 2336 2112 7 595 248 135 0 55 chrUextra 1339521 1339576 -27665080 + MDG1_I LTR Gypsy 5674 5725 -871 7 595 1577 91 15 11 chrUextra 1339580 1339956 -27664700 + MDG1_I LTR Gypsy 5956 6531 -65 7 595 336 30 0 132 chrUextra 1339990 1340066 -27664590 + MDG1_I LTR Gypsy 6531 6596 0 7 595 1587 20 0 0 chrUextra 1340082 1340383 -27664273 + (TAA)n Simple_repeat Simple_repeat 1 301 0 7 595 1231 148 102 18 chrUextra 1340383 1340666 -27663990 + MDG1_LTR LTR Gypsy 42 348 -94 7 595 1770 217 13 67 chrUextra 1340778 1341316 -27663340 + Gypsy12_LTR LTR Gypsy 115 623 -1713 7 595 501 162 97 67 chrUextra 1341317 1341482 -27663174 + Gypsy12_LTR LTR Gypsy 1000 1169 -1167 7 595 2704 31 87 0 chrUextra 1341501 1341857 -27662799 - CIRCE LINE Composite -5969 387 1 7 595 515 77 13 0 chrUextra 1341857 1341935 -27662721 - CIRCE LINE Composite 0 6356 6278 7 595 481 66 0 13 chrUextra 1342035 1342112 -27662544 + S_DM DNA Tc1 1661 1736 0 7 595 1034 15 0 8 chrUextra 1342112 1342239 -27662417 - CIRCE LINE Composite -1861 4495 4370 7 595 1588 120 67 36 chrUextra 1342239 1342595 -27662061 - ROVER-LTR_DM LTR Gypsy 0 367 1 7 595 1904 134 56 12 chrUextra 1342595 1343009 -27661647 - ROVER-I_DM LTR Gypsy 0 6584 6153 7 595 5589 0 1 1 chrUextra 1343292 1343962 -27660694 - POGO DNA Pogo -30 2091 1422 7 595 4234 0 0 0 chrUextra 1343960 1344449 -27660207 - POGO DNA Pogo -1330 791 303 7 595 1587 9 0 0 chrUextra 1344562 1344776 -27659880 + (TTA)n Simple_repeat Simple_repeat 1 214 0 7 595 6439 62 35 0 chrUextra 1344778 1345656 -27659000 - IVK_DM LINE I -1237 4165 3257 7 595 346 60 0 0 chrUextra 1345656 1345706 -27658950 - IVK_DM LINE I -2316 3086 3037 7 595 1776 35 0 4 chrUextra 1345806 1346033 -27658623 + Gypsy6A_LTR LTR Gypsy 195 420 0 7 595 6436 48 25 44 chrUextra 1346033 1346963 -27657693 + Gypsy3_I LTR Gypsy 1 912 -5265 7 595 1655 198 28 84 chrUextra 1347063 1347636 -27657020 + TART_B1 LINE telomeric 1136 1676 -8978 7 595 764 83 0 0 chrUextra 1347644 1347764 -27656892 + TART_B1 LINE telomeric 2286 2405 -8249 7 595 227 32 0 0 chrUextra 1347764 1347795 -27656861 + PROTOP_A DNA P 1 31 -1074 7 595 3044 19 0 38 chrUextra 1347793 1348186 -27656470 + PROTOP_A DNA P 728 1105 0 7 595 259 59 0 0 chrUextra 1348186 1348220 -27656436 + TART_B1 LINE telomeric 2399 2432 -8222 7 595 1911 48 0 4 chrUextra 1348323 1348572 -27656084 + Gypsy6A_LTR LTR Gypsy 173 420 0 7 595 5855 41 18 81 chrUextra 1348572 1349477 -27655179 + Gypsy6_I LTR Gypsy 1 848 -6164 7 595 1017 53 0 0 chrUextra 1349577 1349709 -27654947 - DMCR1A LINE CR1 -715 3755 3624 7 595 7743 28 88 0 chrUextra 1349706 1350734 -27653922 - DMCR1A LINE CR1 -1012 3458 2340 7 595 3198 13 3 0 chrUextra 1350834 1351212 -27653444 - Gypsy4_I LTR Gypsy -1960 4328 3950 7 595 6419 7 25 0 chrUextra 1351225 1351990 -27652666 - Gypsy4_I LTR Gypsy -2392 3896 3113 7 595 875 296 186 11 chrUextra 1352258 1353213 -27651443 + TV1I LTR Gypsy 379 1501 -4559 7 595 247 233 12 0 chrUextra 1353673 1353755 -27650901 + DM297_I LTR Gypsy 2372 2443 -3724 7 595 503 330 78 43 chrUextra 1353767 1353845 -27650811 + Gypsy4_I LTR Gypsy 2521 2633 -3655 7 595 1425 42 19 0 chrUextra 1353845 1354059 -27650597 + TLD2 Unknown Unknown 1 218 0 7 595 503 330 78 43 chrUextra 1354059 1354502 -27650154 + Gypsy4_I LTR Gypsy 2634 3280 -3008 7 595 397 176 11 42 chrUextra 1354665 1354760 -27649896 + TIRANT_I LTR Gypsy 1 92 -7600 7 595 2059 198 68 45 chrUextra 1354809 1355723 -27648933 + TIRANT_I LTR Gypsy 237 1037 -6655 7 595 1006 53 15 0 chrUextra 1355858 1355991 -27648665 - R1_DM LINE R1 -357 4999 4865 7 595 21 0 0 0 chrUextra 1356337 1356358 -27648298 + AT_rich Low_complexity Low_complexity 1 21 0 7 595 3707 30 93 0 chrUextra 1357114 1357771 -27646885 - R1_DM LINE R1 -252 5104 4387 7 595 4017 40 2 0 chrUextra 1357768 1358270 -27646386 - R1_DM LINE R1 -2010 3346 2844 7 595 7415 101 13 8 chrUextra 1358370 1359525 -27645131 + S_DM DNA Tc1 425 1585 -151 7 595 5333 21 44 1 chrUextra 1359625 1360290 -27644366 - R1_DM LINE R1 -617 4739 4047 7 595 3908 22 57 0 chrUextra 1360284 1360780 -27643876 - R1_DM LINE R1 -851 4505 3982 7 595 8691 39 15 8 chrUextra 1360881 1362035 -27642621 - ROO_I LTR Pao -6076 2180 1019 7 595 4488 24 5 0 chrUextra 1362137 1362689 -27641967 - PROTOP_A DNA P -550 555 1 7 595 4000 91 7 2 chrUextra 1362689 1363290 -27641366 - TART LINE telomeric -13226 1251 648 7 595 2504 61 19 96 chrUextra 1363391 1363920 -27640736 + BATUMI_I LTR Pao 279 766 -7197 7 595 3252 86 2 0 chrUextra 1363903 1364381 -27640275 - I_DM LINE I -2320 3911 3433 7 595 1128 58 0 0 chrUextra 1364390 1364545 -27640111 - I_DM LINE I -2995 3236 3082 7 595 4250 10 2 0 chrUextra 1364645 1365148 -27639508 - DOC2_DM LINE Jockey -2438 2355 1852 7 595 4674 14 139 0 chrUextra 1365146 1365800 -27638856 - DOC2_DM LINE Jockey -870 3923 3179 7 595 9211 33 26 0 chrUextra 1365900 1367055 -27637601 + R1_DM LINE R1 2122 3306 -2050 7 595 228 143 0 0 chrUextra 1367199 1367241 -27637415 + (TA)n Simple_repeat Simple_repeat 1 42 0 7 595 189 0 0 0 chrUextra 1367667 1367688 -27636968 + (T)n Simple_repeat Simple_repeat 1 21 0 7 595 21 0 0 0 chrUextra 1368151 1368172 -27636484 + AT_rich Low_complexity Low_complexity 1 21 0 7 595 1389 32 5 11 chrUextra 1368410 1368601 -27636055 - IDEFIX_I LTR Gypsy -3249 2379 2190 7 595 1758 53 20 0 chrUextra 1368618 1368863 -27635793 - IDEFIX_I LTR Gypsy -4764 864 615 7 595 3966 37 0 0 chrUextra 1368873 1369386 -27635270 - IDEFIX_I LTR Gypsy -5115 513 1 7 595 4286 16 0 8 chrUextra 1369664 1370180 -27634476 - FW_DM LINE Jockey -581 4111 3600 7 595 5201 25 0 0 chrUextra 1370188 1370818 -27633838 - FW_DM LINE Jockey -3764 928 299 7 595 368 21 0 0 chrUextra 1370918 1370966 -27633690 + PROTOP DNA P 527 574 -3906 7 595 4654 14 28 0 chrUextra 1370963 1371536 -27633120 + PROTOP DNA P 3892 4480 0 7 595 821 109 0 8 chrUextra 1371536 1371665 -27632991 - TART LINE telomeric -7545 6932 6805 7 595 1577 125 3 52 chrUextra 1371675 1371963 -27632693 - TART LINE telomeric -10520 3957 3684 7 595 288 169 0 0 chrUextra 1371963 1372028 -27632628 - TART LINE telomeric -11118 3359 3295 7 595 5209 7 0 3 chrUextra 1372172 1372782 -27631874 - DOC LINE Jockey -4115 610 3 7 595 3416 83 9 23 chrUextra 1372791 1373318 -27631338 + Gypsy12_I LTR Gypsy 9 528 -5018 7 595 3279 20 10 0 chrUextra 1373426 1373830 -27630826 + TAHRE LINE telomeric 459 866 -9597 7 595 2441 38 50 0 chrUextra 1373831 1374051 -27630605 - DM1731_LTR LTR Copia 0 336 117 7 595 297 0 0 0 chrUextra 1374051 1374084 -27630572 + (CATA)n Simple_repeat Simple_repeat 2 34 0 7 595 2441 38 50 0 chrUextra 1374084 1374183 -27630473 - DM1731_LTR LTR Copia -220 116 2 7 595 3280 2 8 13 chrUextra 1374183 1374580 -27630076 - DM1731_I LTR Copia 0 3976 3582 7 595 4440 133 52 43 chrUextra 1374680 1375833 -27628823 - TART_B1 LINE telomeric -7956 2698 1109 7 595 9661 9 32 1 chrUextra 1375933 1377086 -27627570 - Invader1_I LTR Gypsy -147 3039 1851 7 595 1757 5 0 0 chrUextra 1377186 1377388 -27627268 + DMRT1B LINE R1 4982 5183 0 7 595 1380 112 54 0 chrUextra 1377423 1377664 -27626992 + TART_B1 LINE telomeric 2309 2562 -8092 7 595 1662 41 0 0 chrUextra 1377665 1377885 -27626771 + TART_B1 LINE telomeric 3433 3652 -7002 7 595 2803 106 39 26 chrUextra 1377882 1378339 -27626317 + TART_B1 LINE telomeric 4297 4759 -5895 7 595 3369 200 36 26 chrUextra 1378441 1379592 -27625064 + SAR_DM Satellite Satellite 1 1162 -208 7 595 4837 0 2 0 chrUextra 1379692 1380259 -27624397 + FW_DM LINE Jockey 4125 4692 0 7 595 392 103 0 0 chrUextra 1380476 1380534 -27624122 + FB4_DM DNA Tc1 1018 1075 -3014 7 595 865 128 5 11 chrUextra 1380561 1380750 -27623906 - S_DM DNA Tc1 0 1736 1549 7 595 9181 5 64 1 chrUextra 1380947 1382096 -27622560 - DM176_I LTR Gypsy -1492 4928 3707 7 595 9675 24 0 0 chrUextra 1383448 1384599 -27620057 - R2_DM LINE R2 -1002 2605 1455 7 595 9264 18 0 3 chrUextra 1384700 1385852 -27618804 + QUASIMODO_I LTR Gypsy 2582 3729 -2331 7 595 1031 16 0 0 chrUextra 1385952 1386078 -27618578 + DM176_LTR LTR Gypsy 382 507 0 7 595 704 268 0 0 chrUextra 1386161 1386366 -27618290 - Copia2_I LTR Copia -97 4065 3861 7 595 2600 16 0 3 chrUextra 1386370 1386685 -27617971 - DM176_I LTR Gypsy -1841 4579 4266 7 595 3504 7 9 0 chrUextra 1386676 1387104 -27617552 - DM176_I LTR Gypsy -2804 3616 3185 7 595 9387 24 3 2 chrUextra 1387204 1388355 -27616301 + G2_DM LINE Jockey 1703 2855 -247 7 595 1206 8 0 0 chrUextra 1388455 1388585 -27616071 + STALKER4_LTR LTR Gypsy 128 257 -145 7 595 1397 58 5 50 chrUextra 1388585 1388785 -27615871 - ROVER-LTR_DM LTR Gypsy 0 367 177 7 595 519 68 0 39 chrUextra 1388916 1388993 -27615663 - ROVER-LTR_DM LTR Gypsy -293 74 1 7 595 5236 5 5 0 chrUextra 1388992 1389606 -27615050 - ROVER-I_DM LTR Gypsy 0 6584 5968 7 595 275 176 58 14 chrUextra 1389770 1389839 -27614817 - DM176_LTR LTR Gypsy -141 366 295 7 595 237 228 11 151 chrUextra 1389948 1390041 -27614615 - DM176_LTR LTR Gypsy -238 269 190 7 595 865 126 0 71 chrUextra 1390097 1390251 -27614405 - DM176_I LTR Gypsy 0 6420 6278 7 595 749 156 2 28 chrUextra 1390259 1390410 -27614246 - DM176_I LTR Gypsy -561 5859 5731 7 595 1725 212 11 13 chrUextra 1390394 1390857 -27613799 - DM297_I LTR Gypsy -1433 4734 4273 7 595 257 32 0 0 chrUextra 1391130 1391161 -27613495 - CIRCE LINE Composite -1376 4980 4950 7 595 2888 24 0 0 chrUextra 1391161 1391495 -27613161 + R1_DM LINE R1 2864 3197 -2159 7 595 2974 20 3 0 chrUextra 1391496 1391840 -27612816 + R1_DM LINE R1 3938 4282 -1074 7 595 2123 32 4 0 chrUextra 1391860 1392106 -27612550 + R1_DM LINE R1 4407 4653 -703 7 595 2071 149 9 0 chrUextra 1392211 1392547 -27612109 - DMCR1A LINE CR1 -850 3620 3282 7 595 1173 87 6 12 chrUextra 1392562 1392723 -27611933 - DMCR1A LINE CR1 -1239 3231 3072 7 595 875 145 13 28 chrUextra 1392723 1393016 -27611640 + DNAREP1_DM LINE Penelope 2 332 -262 7 595 597 167 86 16 chrUextra 1393228 1393356 -27611300 - DNAREP1_DM LINE Penelope -26 568 432 7 595 8264 72 89 1 chrUextra 1393460 1394609 -27610047 - TART LINE telomeric -12618 1859 610 7 595 9529 20 13 5 chrUextra 1394709 1395815 -27608841 + R1_DM LINE R1 4243 5356 0 7 595 5918 15 41 1 chrUextra 1395959 1397109 -27607547 + R1_DM LINE R1 3539 4734 -622 7 595 1019 0 0 0 chrUextra 1397209 1397318 -27607338 - ROO_I LTR Pao -8147 109 1 7 595 3999 2 0 0 chrUextra 1397318 1397746 -27606910 - ROO_LTR LTR Pao 0 428 1 7 595 1099 336 20 8 chrUextra 1397835 1398327 -27606329 - Gypsy3_I LTR Gypsy -4648 1529 1032 7 595 2648 0 7 0 chrUextra 1399709 1400003 -27604653 - Copia_I LTR Copia -4297 296 1 7 595 2468 0 0 0 chrUextra 1400003 1400279 -27604377 - Copia_LTR LTR Copia 0 276 1 7 595 665 267 42 33 chrUextra 1400528 1400859 -27603797 - Gypsy11_I LTR Gypsy -137 3387 3098 7 595 4387 113 59 128 chrUextra 1400962 1402106 -27602550 + BATUMI_I LTR Pao 98 1161 -6802 7 595 5670 19 0 0 chrUextra 1402208 1402844 -27601812 + R1_DM LINE R1 4056 4691 -665 7 595 1601 68 0 5 chrUextra 1402834 1403040 -27601616 + R1_DM LINE R1 5034 5238 -118 7 595 1381 62 0 17 chrUextra 1403023 1403204 -27601452 + R1_DM LINE R1 224 401 -4955 7 595 1107 64 0 7 chrUextra 1403215 1403357 -27601299 + R1_DM LINE R1 721 861 -4495 7 595 9006 51 24 3 chrUextra 1404706 1405855 -27598801 - TART LINE telomeric -4046 10431 9259 7 595 314 28 0 0 chrUextra 1405955 1405991 -27598665 - ROVER-I_DM LTR Gypsy -6446 138 103 7 595 1120 16 0 0 chrUextra 1406042 1406165 -27598491 - ROVER-I_DM LTR Gypsy -6461 123 1 7 595 3050 3 39 25 chrUextra 1406165 1406527 -27598129 - ROVER-LTR_DM LTR Gypsy 0 367 1 7 595 3139 192 0 0 chrUextra 1406527 1407104 -27597552 - ROVER-I_DM LTR Gypsy -2719 3865 3289 7 595 9900 25 15 0 chrUextra 1407204 1408353 -27596303 - NINJA_I LTR Pao -2179 3832 2667 7 595 642 182 112 112 chrUextra 1408453 1408718 -27595938 + Gypsy12_LTR LTR Gypsy 1323 1597 -683 7 595 207 0 0 0 chrUextra 1408718 1408741 -27595915 + (TAA)n Simple_repeat Simple_repeat 3 25 0 7 595 497 206 144 65 chrUextra 1408741 1408827 -27595829 + Gypsy12_LTR LTR Gypsy 1598 1678 -602 7 595 6093 53 47 1 chrUextra 1408820 1409600 -27595056 - IVK_DM LINE I -2 5400 4585 7 595 30 27 0 0 chrUextra 1409819 1409856 -27594800 + AT_rich Low_complexity Low_complexity 1 37 0 7 595 27 0 0 0 chrUextra 1410277 1410304 -27594352 + AT_rich Low_complexity Low_complexity 1 27 0 7 595 488 209 27 143 chrUextra 1410306 1410607 -27594049 + TOM_I LTR Gypsy 1 266 -5846 7 595 9737 23 0 12 chrUextra 1410949 1412097 -27592559 - TAHRE LINE telomeric -5444 5019 3886 7 595 1219 184 37 0 chrUextra 1412197 1412441 -27592215 + ROVER-I_DM LTR Gypsy 5056 5308 -1276 7 595 2801 175 80 18 chrUextra 1412443 1413096 -27591560 + ROVER-I_DM LTR Gypsy 5892 6584 0 7 595 1460 80 98 4 chrUextra 1413095 1413320 -27591336 + ROVER-LTR_DM LTR Gypsy 1 246 -121 7 595 9792 36 27 0 chrUextra 1413444 1414591 -27590065 + DIVER_I LTR Pao 234 1411 -4232 7 595 4441 43 9 0 chrUextra 1414691 1415228 -27589428 - TART LINE telomeric -11876 2601 2060 7 595 4323 69 125 0 chrUextra 1415232 1415838 -27588818 - TART LINE telomeric -12625 1852 1171 7 595 482 18 0 0 chrUextra 1415938 1415995 -27588661 + STALKER4_I LTR Gypsy 6474 6530 0 7 595 3430 48 1 14 chrUextra 1415995 1416434 -27588222 + STALKER4_LTR LTR Gypsy 1 399 -3 7 595 4815 25 132 0 chrUextra 1416434 1417085 -27587571 - R1_DM LINE R1 -1700 3656 2920 7 595 8621 59 13 11 chrUextra 1417185 1418330 -27586326 + IDEFIX_I LTR Gypsy 3751 4897 -731 7 595 262 0 0 0 chrUextra 1418463 1418494 -27586162 + Gypsy12A_LTR LTR Gypsy 2249 2279 -1 7 595 417 200 11 0 chrUextra 1418873 1418963 -27585693 + DNAREP1_DM LINE Penelope 24 114 -480 7 595 1194 33 118 0 chrUextra 1418950 1419102 -27585554 + Baggins1 LINE LOA 3482 3651 -1802 7 595 3322 44 114 9 chrUextra 1419114 1419554 -27585102 + Baggins1 LINE LOA 3705 4190 -1263 7 595 2501 96 42 14 chrUextra 1419678 1420036 -27584620 - HMSBEAGLE_I LTR Gypsy -5040 1489 1122 7 595 1048 118 47 5 chrUextra 1420134 1420346 -27584310 - HMSBEAGLE_I LTR Gypsy -5819 710 490 7 595 237 235 0 14 chrUextra 1420456 1420525 -27584131 - TIRANT_LTR LTR Gypsy -109 308 241 7 595 266 105 0 0 chrUextra 1420523 1420561 -27584095 - HMSBEAGLE_I LTR Gypsy -132 6397 6360 7 595 1481 131 83 0 chrUextra 1420924 1421176 -27583480 + MAX_LTR LTR Pao 49 321 0 7 595 2377 40 3 60 chrUextra 1421176 1421493 -27583163 + MAX_I LTR Pao 1 299 -7615 7 595 292 337 112 8 chrUextra 1421794 1422045 -27582611 - BLASTOPIA_I LTR Gypsy -1 4480 4204 7 595 1146 165 33 8 chrUextra 1422170 1422414 -27582242 + SAR_DM Satellite Satellite 540 789 -683 7 595 1243 172 20 8 chrUextra 1422425 1423316 -27581340 + SAR_DM Satellite Satellite 1 901 -683 7 595 5065 18 0 0 chrUextra 1423416 1423987 -27580669 - FW_DM LINE Jockey -1049 3643 3073 7 595 4639 28 4 0 chrUextra 1424020 1424562 -27580094 - DOC2_DM LINE Jockey -2467 2326 1783 7 595 1768 43 103 4 chrUextra 1424662 1424894 -27579762 - G4_DM LINE Jockey -273 3583 3329 7 595 401 74 56 0 chrUextra 1424888 1424942 -27579714 - G4_DM LINE Jockey -683 3173 3117 7 595 4898 39 32 10 chrUextra 1424924 1425539 -27579117 - G4_DM LINE Jockey -903 2953 2325 7 595 654 47 12 0 chrUextra 1425537 1425623 -27579033 - G4_DM LINE Jockey -1876 1980 1894 7 595 1560 0 51 0 chrUextra 1425632 1425808 -27578848 - G4_DM LINE Jockey -2195 1661 1477 7 595 353 363 34 28 chrUextra 1425936 1426290 -27578366 - BURDOCK_I LTR Gypsy -4878 982 627 7 595 9824 28 8 0 chrUextra 1427154 1428300 -27576356 - R1_DM LINE R1 -1824 3532 2378 7 595 7902 14 46 28 chrUextra 1428483 1429436 -27575220 - CIRCE LINE Composite -5386 970 1 7 595 900 46 0 0 chrUextra 1429436 1429545 -27575111 - CIRCE LINE Composite 0 6356 6248 7 595 2583 0 3 0 chrUextra 1429646 1429928 -27574728 + Copia_I LTR Copia 4311 4593 0 7 595 2468 0 0 0 chrUextra 1429928 1430204 -27574452 + Copia_LTR LTR Copia 1 276 0 7 595 338 152 22 122 chrUextra 1430204 1430237 -27574419 + SSU-rRNA_Dme rRNA rRNA 1972 1995 0 7 595 5299 19 61 1 chrUextra 1430891 1431876 -27572780 + R2_DM LINE R2 2231 3274 -333 7 595 1243 35 0 0 chrUextra 1431893 1432036 -27572620 + LSU-rRNA_Dme rRNA rRNA 2579 2721 -1179 7 595 4433 37 30 3 chrUextra 1432136 1432692 -27571964 + IDEFIX_I LTR Gypsy 4466 5036 -592 7 595 2937 58 0 0 chrUextra 1432692 1433053 -27571603 + BEL_LTR LTR Pao 1 361 0 7 595 1848 49 0 9 chrUextra 1433053 1433281 -27571375 + BEL_I LTR Pao 1 226 -5178 7 595 663 215 0 0 chrUextra 1433382 1433517 -27571139 - Gypsy2_I LTR Gypsy -914 5221 5087 7 595 276 301 30 30 chrUextra 1433632 1433771 -27570885 - G2_DM LINE Jockey -2720 382 281 7 595 2614 3 0 0 chrUextra 1434625 1434908 -27569748 - MAX_I LTR Pao -7631 283 1 7 595 2932 6 0 0 chrUextra 1434908 1435229 -27569427 - MAX_LTR LTR Pao 0 321 1 7 595 5015 2 2 0 chrUextra 1435229 1435769 -27568887 - BARI_DM DNA Tc1 -372 1356 816 7 595 2281 8 16 0 chrUextra 1435869 1436125 -27568531 - MAX_I LTR Pao -7654 260 1 7 595 2932 6 0 0 chrUextra 1436125 1436446 -27568210 - MAX_LTR LTR Pao 0 321 1 7 595 1718 294 12 21 chrUextra 1436450 1437013 -27567643 + MICROPIA_I LTR Gypsy 2768 3325 -1151 7 595 1101 289 4 4 chrUextra 1437907 1438249 -27566407 + Gypsy9_I LTR Gypsy 882 1543 -5469 7 595 528 59 0 29 chrUextra 1438359 1438429 -27566227 + ACCORD2_LTR LTR Gypsy 148 215 0 7 595 1641 123 16 4 chrUextra 1438429 1438671 -27565985 + HETA LINE telomeric 2433 2677 -3404 7 595 4099 168 16 42 chrUextra 1438667 1439498 -27565158 + HETA LINE telomeric 2959 3767 -2314 7 595 1462 103 216 10 chrUextra 1439599 1439891 -27564765 - DMRT1C LINE R1 -3169 2274 1923 7 595 236 161 0 16 chrUextra 1440407 1440470 -27564186 + (TTTA)n Simple_repeat Simple_repeat 1 62 0 7 595 2806 59 2 2 chrUextra 1440841 1441389 -27563267 - R1_DM LINE R1 -3620 1736 1081 7 595 2353 55 0 7 chrUextra 1441383 1441677 -27562979 - R1_DM LINE R1 -3748 1608 1317 7 74 2693 26 0 0 chrUextra 1441675 1441983 -27562673 - R1_DM LINE R1 -3528 1828 1521 7 596 960 108 7 19 chrUextra 1442087 1443029 -27561627 + RSP Satellite Satellite 1 931 0 7 596 1422 27 0 42 chrUextra 1443033 1443225 -27561431 - G5_DM LINE Jockey 0 4856 4673 7 596 4561 14 16 0 chrUextra 1443327 1443843 -27560813 - DOC LINE Jockey -4198 527 4 7 596 2721 73 13 2 chrUextra 1443849 1444409 -27560247 - G5_DM LINE Jockey -146 4710 3972 7 596 7736 93 51 0 chrUextra 1444567 1445709 -27558947 - TART_B1 LINE telomeric -7427 3227 2028 7 596 29 28 0 0 chrUextra 1446762 1446798 -27557858 + AT_rich Low_complexity Low_complexity 1 36 0 7 596 760 0 0 0 chrUextra 1447050 1447132 -27557524 - ROO_LTR LTR Pao -346 82 1 7 596 3832 110 0 7 chrUextra 1447132 1447733 -27556923 + IDEFIX_I LTR Gypsy 5032 5628 0 7 596 3697 46 2 2 chrUextra 1447733 1448191 -27556465 + IDEFIX_LTR LTR Gypsy 1 458 -136 7 596 234 239 0 0 chrUextra 1448554 1448600 -27556056 + Gypsy4_I LTR Gypsy 3452 3497 -2791 7 596 534 272 58 45 chrUextra 1448611 1448834 -27555822 + Gypsy4_I LTR Gypsy 3458 3683 -2605 7 596 22 0 0 0 chrUextra 1448940 1448962 -27555694 + AT_rich Low_complexity Low_complexity 1 22 0 7 596 527 299 9 20 chrUextra 1449193 1449427 -27555229 + Gypsy9_I LTR Gypsy 868 1051 -3626 7 596 4021 2 7 0 chrUextra 1449532 1449976 -27554680 - BARI_DM DNA Tc1 -1278 450 4 7 596 6100 0 1 27 chrUextra 1449976 1450673 -27553983 - BARI_DM DNA Tc1 -1 1727 1049 7 596 8444 35 13 23 chrUextra 1450868 1451914 -27552742 + CIRCE LINE Composite 4981 6016 -340 7 596 1574 57 0 0 chrUextra 1452014 1452206 -27552450 - PROTOP DNA P -4215 265 74 7 596 258 32 0 0 chrUextra 1452406 1452437 -27552219 + (CAA)n Simple_repeat Simple_repeat 2 32 0 7 596 4756 2 4 0 chrUextra 1453255 1453777 -27550879 + FW_DM LINE Jockey 4169 4692 0 7 596 4762 20 2 0 chrUextra 1453783 1454326 -27550330 + R1_DM LINE R1 4729 5272 -84 7 596 607 28 0 0 chrUextra 1454325 1454396 -27550260 + R1_DM LINE R1 229 299 -5057 7 596 600 122 41 50 chrUextra 1454668 1454789 -27549867 - NTS_DM Other Other -120 120 1 7 596 1610 28 19 19 chrUextra 1454789 1455004 -27549652 - NTS_DM Other Other 0 240 26 7 596 268 196 0 19 chrUextra 1455081 1455133 -27549523 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 7 596 3916 0 23 2 chrUextra 1455194 1455636 -27549020 + G_DM LINE Jockey 1 451 -3895 7 596 5442 53 49 0 chrUextra 1455738 1456416 -27548240 - DIVER_I LTR Pao -4932 711 1 7 596 1115 108 9 110 chrUextra 1456437 1456665 -27547991 - DIVER_LTR LTR Pao 0 224 20 7 596 1864 9 0 0 chrUextra 1456664 1456876 -27547780 + STALKER4_I LTR Gypsy 2725 2936 -3594 7 596 1616 66 43 22 chrUextra 1456976 1457207 -27547449 + PROTOP_B DNA P 918 1153 0 7 596 1474 130 133 208 chrUextra 1457401 1457906 -27546750 + DNAREP1_DM LINE Penelope 123 589 -5 7 596 2028 34 0 15 chrUextra 1458216 1458484 -27546172 + Invader2_I LTR Gypsy 4329 4592 0 7 596 1837 77 25 55 chrUextra 1458484 1458758 -27545898 + Invader2_LTR LTR Gypsy 1 266 0 7 596 777 108 0 129 chrUextra 1458791 1458961 -27545695 + HMSBEAGLE_I LTR Gypsy 6219 6366 -163 7 596 266 105 0 0 chrUextra 1459170 1459208 -27545448 + HMSBEAGLE_I LTR Gypsy 6360 6397 -132 7 596 245 243 0 14 chrUextra 1459206 1459277 -27545379 + TIRANT_LTR LTR Gypsy 241 310 -107 7 596 1767 167 19 92 chrUextra 1459464 1459887 -27544769 + Gypsy3_LTR LTR Gypsy 1 392 -6 7 596 235 111 0 62 chrUextra 1459909 1459957 -27544699 + Gypsy3_LTR LTR Gypsy 354 398 0 7 596 2268 32 4 7 chrUextra 1459957 1460237 -27544419 - CIRCE LINE Composite -1097 5259 4981 7 596 2581 105 12 29 chrUextra 1460700 1461834 -27542822 + DMSAT6 Satellite Satellite 1 1114 -3 7 596 5387 118 28 3 chrUextra 1461936 1463073 -27541583 + Gypsy2_I LTR Gypsy 2034 3939 -3073 7 596 5373 2 2 0 chrUextra 1463173 1463764 -27540892 - FW_DM LINE Jockey -1805 2887 2296 7 596 4765 24 0 0 chrUextra 1463772 1464312 -27540344 - R1_DM LINE R1 -616 4740 4201 7 596 1539 17 6 0 chrUextra 1464412 1464590 -27540066 + FW_DM LINE Jockey 3655 3833 -859 7 596 4344 28 41 2 chrUextra 1464594 1465128 -27539528 + FW_DM LINE Jockey 4138 4692 0 7 596 243 59 0 0 chrUextra 1465138 1465172 -27539484 - R1_DM LINE R1 -3966 1390 1357 7 596 3086 34 13 3 chrUextra 1465172 1465551 -27539105 - R1_DM LINE R1 -4150 1206 824 7 596 359 258 99 103 chrUextra 1465653 1465916 -27538740 + Invader1_LTR LTR Gypsy 107 368 -55 7 596 271 128 0 21 chrUextra 1466436 1466484 -27538172 - HMSBEAGLE_I LTR Gypsy -6308 221 175 7 596 376 49 65 16 chrUextra 1466506 1466568 -27538088 - HMSBEAGLE_I LTR Gypsy -6464 65 1 7 596 953 183 102 15 chrUextra 1466567 1466772 -27537884 - DMLTR5 LTR Gypsy 0 266 44 7 596 4753 32 0 4 chrUextra 1466891 1467450 -27537206 + HETA LINE telomeric 5524 6080 -1 7 596 276 29 0 0 chrUextra 1467450 1467484 -27537172 + TAHRE LINE telomeric 10420 10453 -10 7 596 2172 173 138 31 chrUextra 1467485 1468027 -27536629 + TART LINE telomeric 9687 10286 -4191 7 596 8668 57 8 3 chrUextra 1468166 1469267 -27535389 + R1_DM LINE R1 3 1109 -4247 7 596 825 118 0 0 chrUextra 1469368 1469495 -27535161 - ARS406_DM Unknown Unknown -225 128 2 7 596 4262 210 15 19 chrUextra 1469390 1470471 -27534185 + SAR_DM Satellite Satellite 180 1256 -216 7 596 985 55 0 0 chrUextra 1470380 1470507 -27534149 - ARS406_DM Unknown Unknown -164 189 63 7 596 614 300 86 13 chrUextra 1470663 1470977 -27533679 - NINJA_I LTR Pao -2487 3524 3188 7 596 364 301 11 11 chrUextra 1471480 1471650 -27533006 - Invader2_I LTR Gypsy -630 3962 3872 7 596 5069 2 0 0 chrUextra 1471845 1472388 -27532268 + R2_DM LINE R2 3065 3607 0 7 596 667 27 0 0 chrUextra 1472391 1472465 -27532191 + LSU-rRNA_Dme rRNA rRNA 2578 2651 -1249 7 596 4486 12 4 0 chrUextra 1472481 1472983 -27531673 + R1_DM LINE R1 1 504 -4852 7 596 2877 174 8 11 chrUextra 1473083 1474219 -27530437 + SAR_DM Satellite Satellite 1 1132 -569 7 596 1704 111 115 0 chrUextra 1474872 1475160 -27529496 + MAX_LTR LTR Pao 1 321 0 7 596 2011 33 3 97 chrUextra 1475160 1475459 -27529197 + MAX_I LTR Pao 1 271 -7643 7 596 10335 2 1 0 chrUextra 1475559 1476697 -27527959 - G_DM LINE Jockey -167 4179 3041 7 596 1137 138 64 21 chrUextra 1476798 1477220 -27527436 - DNAREP1_DM LINE Penelope -262 332 86 7 596 2636 244 49 31 chrUextra 1477219 1477934 -27526722 - Gypsy6_I LTR Gypsy -2332 4680 3953 7 596 5706 3 0 0 chrUextra 1478034 1478649 -27526007 + LSU-rRNA_Dme rRNA rRNA 1967 2581 -1319 7 596 4696 2 2 0 chrUextra 1478664 1479171 -27525485 + R2_DM LINE R2 1820 2327 -1280 7 596 5055 0 0 0 chrUextra 1479271 1479814 -27524842 + IVK_DM LINE I 4409 4951 -451 7 596 2860 58 8 3 chrUextra 1479814 1480176 -27524480 - Gypsy10_LTR LTR Gypsy 0 364 1 7 596 587 48 0 98 chrUextra 1480176 1480268 -27524388 - Gypsy10_I LTR Gypsy 0 5278 5196 7 596 846 97 227 0 chrUextra 1481113 1481267 -27523389 + FB4_DM DNA Tc1 3 191 -3898 7 596 670 93 41 0 chrUextra 1481260 1481357 -27523299 - Baggins1 LINE LOA -626 4827 4727 7 596 27 29 0 0 chrUextra 1481596 1481630 -27523026 + AT_rich Low_complexity Low_complexity 1 34 0 7 596 3676 195 211 5 chrUextra 1481746 1482810 -27521846 - DMRT1A LINE R1 -275 4908 3640 7 596 189 74 0 0 chrUextra 1482810 1482837 -27521819 + (TATG)n Simple_repeat Simple_repeat 3 29 0 7 596 1188 150 99 5 chrUextra 1482837 1482878 -27521778 - DMRT1A LINE R1 -1544 3639 3579 7 596 5292 42 17 13 chrUextra 1482990 1484113 -27520543 + Transib5 DNA Transib 997 2165 -836 7 596 8960 49 22 3 chrUextra 1484213 1485348 -27519308 - TART LINE telomeric -4096 10381 9225 7 596 1542 0 0 0 chrUextra 1485450 1485616 -27519040 - LSU-rRNA_Dme rRNA rRNA -3734 166 1 7 596 21 95 0 0 chrUextra 1485628 1485691 -27518965 + AT_rich Low_complexity Low_complexity 1 63 0 7 596 34 24 0 0 chrUextra 1485904 1485945 -27518711 + AT_rich Low_complexity Low_complexity 1 41 0 7 596 884 120 5 19 chrUextra 1486682 1487290 -27517366 + RSP Satellite Satellite 1 599 0 7 596 547 276 23 65 chrUextra 1487544 1487807 -27516849 - FROGGER_I LTR Copia -40 2037 1786 7 596 989 246 131 7 chrUextra 1487916 1488206 -27516450 + Gypsy3_I LTR Gypsy 1906 2231 -3946 7 596 1020 249 12 12 chrUextra 1488220 1488464 -27516192 + Gypsy2_I LTR Gypsy 1847 2090 -4045 7 596 4828 9 34 0 chrUextra 1489150 1489708 -27514948 + IDEFIX_LTR LTR Gypsy 18 594 0 7 596 254 270 67 67 chrUextra 1489811 1490021 -27514635 + TIRANT_I LTR Gypsy 5093 5302 -2390 7 596 618 242 34 31 chrUextra 1490065 1490283 -27514373 + ZAM_I LTR Gypsy 5236 5432 -2058 7 596 4337 14 0 2 chrUextra 1490384 1490875 -27513781 + Copia2_I LTR Copia 3673 4162 0 7 596 233 29 0 0 chrUextra 1490875 1490907 -27513749 + Copia2_LTR_DM LTR Copia 1 32 -166 7 596 3436 10 60 0 chrUextra 1490907 1491306 -27513350 + Invader1_LTR LTR Gypsy 1 423 0 7 596 1557 6 0 0 chrUextra 1491306 1491476 -27513180 + Copia2_LTR_DM LTR Copia 29 198 0 7 596 4041 15 2 0 chrUextra 1491618 1492073 -27512583 - PROTOP_A DNA P -649 456 1 7 596 1433 93 0 15 chrUextra 1492184 1492381 -27512275 - PROTOP_A DNA P -1 1104 907 7 596 269 169 361 33 chrUextra 1492345 1492467 -27512189 + Invader3_I LTR Gypsy 1538 1699 -3189 7 596 372 243 5 139 chrUextra 1492545 1492752 -27511904 + Gypsy_LTR LTR Gypsy 29 204 -291 7 596 2161 251 30 16 chrUextra 1492855 1493429 -27511227 - TOM_I LTR Gypsy -842 5270 4689 7 596 2631 194 15 19 chrUextra 1493446 1493976 -27510680 - TOM_I LTR Gypsy -3152 2960 2433 7 596 9408 45 5 0 chrUextra 1494086 1495220 -27509436 - TAHRE LINE telomeric -4082 6381 5242 7 596 4563 0 0 0 chrUextra 1495320 1495832 -27508824 - DM297_I LTR Gypsy -538 5629 5118 7 596 5590 9 0 0 chrUextra 1495822 1496453 -27508203 - DM297_I LTR Gypsy -2278 3889 3259 7 596 2889 110 11 52 chrUextra 1496553 1497015 -27507641 + Gypsy12_LTR LTR Gypsy 1871 2313 -23 7 596 881 191 184 70 chrUextra 1497010 1497433 -27507223 + HETA LINE telomeric 5441 5910 -171 7 596 1394 49 0 98 chrUextra 1497482 1497686 -27506970 + PROTOP_B DNA P 1 184 -969 7 596 9474 37 0 4 chrUextra 1497786 1498919 -27505737 + G2_DM LINE Jockey 1043 2170 -932 7 596 822 234 116 11 chrUextra 1499084 1499361 -27505295 + BS LINE Jockey 3133 3438 -1688 7 596 1134 188 51 33 chrUextra 1499420 1499695 -27504961 - DMCR1A LINE CR1 -2065 2405 2126 7 596 1658 193 16 41 chrUextra 1500252 1500655 -27504001 + Gypsy3_LTR LTR Gypsy 31 392 -6 7 596 444 54 0 159 chrUextra 1500713 1500801 -27503855 + BLOOD_LTR LTR Gypsy 185 258 -141 7 596 3692 39 13 13 chrUextra 1500916 1501384 -27503272 + BLOOD_I LTR Gypsy 1 468 -6145 7 596 893 0 0 0 chrUextra 1501486 1501581 -27503075 - MDG1_I LTR Gypsy -6501 95 1 7 596 3184 14 0 0 chrUextra 1501581 1501937 -27502719 - MDG1_LTR LTR Gypsy 0 442 87 7 596 423 100 0 0 chrUextra 1501937 1502007 -27502649 + (TTA)n Simple_repeat Simple_repeat 3 72 0 7 596 5334 3 0 0 chrUextra 1502023 1502616 -27502040 + MDG1_I LTR Gypsy 4354 4946 -1650 7 596 2586 111 3 3 chrUextra 1502716 1503076 -27501580 - R1_DM LINE R1 -3898 1458 1099 7 596 414 146 68 110 chrUextra 1503076 1503222 -27501434 - R1_DM LINE R1 -4651 705 566 7 596 3144 121 79 71 chrUextra 1503217 1503848 -27500808 - R1_DM LINE R1 -4686 670 35 7 596 2542 104 16 30 chrUextra 1503952 1505079 -27499577 - DMSAT6 Satellite Satellite 0 1110 1 7 596 9097 49 10 3 chrUextra 1505180 1506312 -27498344 - R1_DM LINE R1 -4109 1247 109 7 596 30 45 0 0 chrUextra 1507222 1507266 -27497390 + AT_rich Low_complexity Low_complexity 1 44 0 7 596 950 91 7 7 chrUextra 1507393 1507537 -27497119 - DNAREP1_DM LINE Penelope -450 144 1 7 596 3286 191 13 14 chrUextra 1507644 1508776 -27495880 + SAR_DM Satellite Satellite 1 1130 -208 7 596 523 0 0 0 chrUextra 1508876 1508936 -27495720 - TABOR_I LTR Gypsy -6276 60 1 7 596 4737 0 0 0 chrUextra 1508936 1509442 -27495214 - TABOR_LTR LTR Gypsy 0 506 1 7 596 4336 57 0 34 chrUextra 1509442 1510006 -27494650 - Gypsy10_I LTR Gypsy -2215 3063 2519 7 596 10053 24 9 1 chrUextra 1510107 1511238 -27493418 + MAX_I LTR Pao 5668 6807 -1107 7 596 708 229 240 11 chrUextra 1511338 1511685 -27492971 - BS LINE Jockey -2678 2448 2023 7 596 876 306 39 11 chrUextra 1512112 1512469 -27492187 - BS LINE Jockey -3465 1661 1295 7 596 4889 17 0 0 chrUextra 1512569 1513103 -27491553 - Gypsy6_I LTR Gypsy -1038 5974 5441 7 596 5586 7 0 0 chrUextra 1513098 1513700 -27490956 - Gypsy6_I LTR Gypsy -2479 4533 3932 7 596 242 32 0 0 chrUextra 1513800 1513831 -27490825 - BATUMI_I LTR Pao -7932 31 1 7 596 2164 32 7 31 chrUextra 1513831 1514121 -27490535 - BATUMI_I LTR Pao -679 7284 7002 7 596 1886 36 0 5 chrUextra 1516260 1516482 -27488174 + CIRCE LINE Composite 1665 1885 -4471 7 596 663 286 51 51 chrUextra 1516488 1516820 -27487836 + Gypsy12_I LTR Gypsy 3835 4166 -1380 7 596 6845 31 33 16 chrUextra 1516549 1517388 -27487268 + CIRCE LINE Composite 1884 2737 -3619 7 596 285 227 0 0 chrUextra 1517490 1517556 -27487100 + DMRT1B LINE R1 2644 2709 -2474 7 596 425 177 0 12 chrUextra 1517547 1517627 -27487029 + DMRT1B LINE R1 3671 3749 -1434 7 596 3516 110 112 2 chrUextra 1517585 1518140 -27486516 - DMRT1B LINE R1 -1434 3749 3134 7 596 550 262 73 6 chrUextra 1518171 1518336 -27486320 + Gypsy12_I LTR Gypsy 3154 3329 -2217 7 596 10300 5 0 0 chrUextra 1518720 1519850 -27484806 + TART LINE telomeric 11304 12433 -2044 7 596 4593 4 0 0 chrUextra 1519950 1520461 -27484195 + DOC LINE Jockey 4215 4725 0 7 596 3061 9 0 0 chrUextra 1520460 1520796 -27483860 - Copia2_I LTR Copia -3675 487 152 7 596 241 280 39 78 chrUextra 1520846 1520974 -27483682 - DM1731_I LTR Copia -3324 652 530 7 596 6471 3 70 4 chrUextra 1521179 1522002 -27482654 + MDG1_I LTR Gypsy 5732 6799 -98 7 596 423 100 0 0 chrUextra 1522006 1522076 -27482580 + (TAA)n Simple_repeat Simple_repeat 3 72 0 7 596 2059 17 0 0 chrUextra 1522076 1522306 -27482350 + MDG1_LTR LTR Gypsy 87 316 -126 7 596 8031 31 34 30 chrUextra 1522408 1523470 -27481186 + PROTOP_A DNA P 40 1105 0 7 596 2506 104 25 42 chrUextra 1523637 1524752 -27479904 + DMSAT6 Satellite Satellite 1 1096 -46 7 596 4564 4 0 0 chrUextra 1524866 1525361 -27479295 + LSU-rRNA_Dme rRNA rRNA 1965 2459 -1441 7 596 5968 6 0 0 chrUextra 1525355 1525995 -27478661 + R2_DM LINE R2 1321 1960 -1647 7 596 3874 92 29 29 chrUextra 1526095 1526678 -27477978 - R1_DM LINE R1 -4200 1156 574 7 596 916 103 99 31 chrUextra 1526679 1526840 -27477816 - R1_DM LINE R1 -5184 172 1 7 596 2084 65 3 35 chrUextra 1526858 1527147 -27477509 + Gypsy6A_LTR LTR Gypsy 71 350 -70 7 596 610 64 0 0 chrUextra 1527146 1527224 -27477432 - Stalker2_I LTR Gypsy -4238 3164 3087 7 596 7593 74 39 5 chrUextra 1527324 1528439 -27476217 + R1_DM LINE R1 1829 3740 -1616 7 596 9869 13 1 15 chrUextra 1528553 1529681 -27474975 - CIRCE LINE Composite -1789 4567 3456 7 596 8160 26 5 0 chrUextra 1529781 1530710 -27473946 + R1_DM LINE R1 4327 5260 -96 7 596 1528 65 5 10 chrUextra 1530708 1530909 -27473747 + R1_DM LINE R1 164 363 -4993 7 596 355 277 281 20 chrUextra 1531210 1531505 -27473151 - Ulysses_I LTR Gypsy -1486 4895 4524 7 596 241 259 0 0 chrUextra 1531630 1531684 -27472972 - Ulysses_I LTR Gypsy -2002 4379 4326 7 596 235 118 0 0 chrUextra 1532013 1532047 -27472609 + Gypsy8_LTR LTR Gypsy 8 41 -263 7 596 4988 46 3 9 chrUextra 1532237 1533364 -27471292 - BATUMI_I LTR Pao -2075 5888 4626 7 596 4549 11 0 4 chrUextra 1533464 1533990 -27470666 + TART LINE telomeric 13954 14477 0 7 596 855 176 12 29 chrUextra 1534010 1534180 -27470476 + HETRP_DM Satellite Satellite 1516 1682 -190 7 596 243 208 0 19 chrUextra 1534223 1534277 -27470379 + HETRP_DM Satellite Satellite 1580 1632 -240 7 596 336 174 250 42 chrUextra 1534324 1534420 -27470236 + HETRP_DM Satellite Satellite 1519 1634 -238 7 596 638 190 8 16 chrUextra 1534468 1534591 -27470065 + HETRP_DM Satellite Satellite 1516 1637 -235 7 596 514 115 82 55 chrUextra 1534693 1534803 -27469853 - DNAREP1_DM LINE Penelope -465 129 17 7 596 961 96 17 19 chrUextra 1535981 1536905 -27467751 + RSP Satellite Satellite 1 922 -1 7 596 758 89 18 18 chrUextra 1536931 1537045 -27467611 + RSP Satellite Satellite 2 115 -3 7 596 5885 14 21 4 chrUextra 1537145 1537842 -27466814 + PROTOP_A DNA P 397 1105 0 7 596 2400 87 165 33 chrUextra 1537842 1538272 -27466384 + TART_B1 LINE telomeric 3614 4100 -6554 7 596 26 0 0 0 chrUextra 1539459 1539485 -27465171 + AT_rich Low_complexity Low_complexity 1 26 0 7 596 3216 11 37 13 chrUextra 1539598 1539972 -27464684 + CIRCE LINE Composite 3990 4372 -1984 7 596 1785 10 5 0 chrUextra 1539972 1540170 -27464486 + Invader1_LTR LTR Gypsy 1 199 -224 7 596 4185 25 4 4 chrUextra 1540170 1540652 -27464004 - Gypsy_LTR LTR Gypsy 0 482 1 7 596 608 14 0 14 chrUextra 1540652 1540724 -27463932 - Gypsy_I LTR Gypsy 0 6507 6437 7 596 8873 41 49 11 chrUextra 1540824 1541950 -27462706 + DMCR1A LINE CR1 1605 2773 -1697 7 596 5591 20 1 0 chrUextra 1542050 1543175 -27461481 + DM1731_I LTR Copia 383 1552 -2424 7 596 2180 20 88 0 chrUextra 1543275 1543763 -27460893 + DMCR1A LINE CR1 1456 1986 -2484 7 596 5761 25 1 0 chrUextra 1543749 1544400 -27460256 + DMCR1A LINE CR1 3416 4067 -403 7 596 1828 19 0 5 chrUextra 1544507 1544714 -27459942 + R1_DM LINE R1 5151 5356 0 7 596 6676 64 34 2 chrUextra 1544747 1545625 -27459031 + R1_DM LINE R1 1 906 -4450 7 596 1082 162 8 95 chrUextra 1545726 1545978 -27458678 - TART LINE telomeric -5085 9392 9163 7 596 3359 176 25 66 chrUextra 1546006 1546850 -27457806 - HETA LINE telomeric -2027 4054 3246 7 596 327 87 0 0 chrUextra 1546951 1546997 -27457659 - BARI1 DNA Tc1 -1668 82 37 7 596 2148 12 0 8 chrUextra 1548175 1548420 -27456236 + CIRCE LINE Composite 3530 3772 -2584 7 596 7319 21 20 17 chrUextra 1548415 1549299 -27455357 + CIRCE LINE Composite 3952 4838 -1518 7 596 3476 63 130 14 chrUextra 1549399 1550099 -27454557 - TART LINE telomeric -6963 7514 6734 7 596 615 256 82 62 chrUextra 1550151 1550513 -27454143 - TART_B1 LINE telomeric -1448 9206 8847 7 596 8173 81 1 5 chrUextra 1550629 1551747 -27452909 - IDEFIX_I LTR Gypsy -1901 3727 2615 7 596 5682 8 51 1 chrUextra 1551847 1552971 -27451685 + Gypsy4_I LTR Gypsy 2989 4168 -2120 7 596 227 274 14 14 chrUextra 1553147 1553221 -27451435 + DIVER2_I LTR Pao 1965 2038 -2109 7 596 630 176 76 46 chrUextra 1553695 1553892 -27450764 + DMCR1A LINE CR1 4227 4429 -41 7 596 21 0 0 0 chrUextra 1554014 1554035 -27450621 + AT_rich Low_complexity Low_complexity 1 21 0 7 596 1204 174 77 58 chrUextra 1554295 1554817 -27449839 - HETA LINE telomeric -5468 613 1 7 596 2765 175 17 9 chrUextra 1554848 1555373 -27449283 - TAHRE LINE telomeric -4 10459 9931 7 596 1047 49 61 20 chrUextra 1555523 1555670 -27448986 - BATUMI_LTR LTR Pao -119 153 1 7 596 1845 125 113 32 chrUextra 1556035 1556414 -27448242 - DNAREP1_DM LINE Penelope -168 426 17 7 596 2586 89 7 38 chrUextra 1556965 1557856 -27446800 - DMSAT6 Satellite Satellite -32 863 1 7 596 1073 35 6 90 chrUextra 1557967 1558123 -27446533 + Baggins1 LINE LOA 5311 5453 0 7 596 3076 67 14 17 chrUextra 1558559 1558972 -27445684 + Baggins1 LINE LOA 4780 5191 -262 7 596 1686 250 26 61 chrUextra 1559191 1559721 -27444935 - Gypsy3_I LTR Gypsy -4432 1745 859 7 596 303 192 89 38 chrUextra 1559731 1559888 -27444768 - TLD2 Unknown Unknown -47 171 7 7 596 273 237 118 0 chrUextra 1559833 1559909 -27444747 - Gypsy_DS LTR Gypsy -4190 3332 3248 7 596 2555 66 65 16 chrUextra 1559930 1560314 -27444342 + DMCR1A LINE CR1 2 404 -4066 7 596 4608 0 0 0 chrUextra 1560414 1560950 -27443706 + DOC6_DM LINE Jockey 3687 4222 0 7 596 2069 213 68 2 chrUextra 1560962 1561404 -27443252 + TIRANT_I LTR Gypsy 2251 2721 -4971 7 596 1228 8 0 0 chrUextra 1561404 1561537 -27443119 + PROTOP_A DNA P 1 133 -972 7 596 785 43 0 0 chrUextra 1561637 1561729 -27442927 - R1_DM LINE R1 -2843 2513 2422 7 596 1836 23 0 18 chrUextra 1561730 1561948 -27442708 - ACCORD2_LTR LTR Gypsy -1 214 1 7 596 697 59 0 0 chrUextra 1561948 1562031 -27442625 - ACCORD2_I LTR Gypsy -8 7204 7122 7 596 1157 24 240 41 chrUextra 1562027 1562248 -27442408 - ACCORD2_I LTR Gypsy -5441 1771 1507 7 596 1765 33 176 0 chrUextra 1562329 1562509 -27442147 - ACCORD2_I LTR Gypsy -5845 1367 1178 7 596 228 86 0 0 chrUextra 1562509 1562544 -27442112 + (TTA)n Simple_repeat Simple_repeat 2 36 0 7 596 1765 33 176 0 chrUextra 1562544 1562607 -27442049 - ACCORD2_I LTR Gypsy -6035 1177 1083 7 596 1332 20 0 0 chrUextra 1562607 1562760 -27441896 + MICROPIA_LTR LTR Gypsy 1 153 -323 7 596 1543 85 0 19 chrUextra 1562860 1563075 -27441581 - BS LINE Jockey -4907 219 9 7 596 21 36 0 0 chrUextra 1563566 1563594 -27441062 + AT_rich Low_complexity Low_complexity 1 28 0 7 596 9097 38 56 3 chrUextra 1564083 1565205 -27439451 + Baggins1 LINE LOA 516 1697 -3756 7 596 1890 0 5 0 chrUextra 1565305 1565513 -27439143 - DM1731_I LTR Copia -3767 209 1 7 596 2855 39 0 0 chrUextra 1565513 1565849 -27438807 - DM1731_LTR LTR Copia 0 336 1 7 596 208 200 31 0 chrUextra 1565853 1565918 -27438738 + (TTA)n Simple_repeat Simple_repeat 2 68 0 7 596 38 39 0 0 chrUextra 1566375 1566427 -27438229 + AT_rich Low_complexity Low_complexity 1 52 0 7 596 3524 186 51 75 chrUextra 1566549 1567649 -27437007 - TART LINE telomeric -4522 9955 8967 7 596 545 293 153 42 chrUextra 1567765 1568261 -27436395 + Invader1_I LTR Gypsy 1465 1650 -1536 7 596 519 114 80 83 chrUextra 1568221 1568393 -27436263 - PROTOP_A DNA P -588 517 348 7 596 352 280 34 8 chrUextra 1568744 1568863 -27435793 + Invader4_I LTR Gypsy 1 122 -2291 7 596 2531 84 0 0 chrUextra 1568974 1569317 -27435339 + TRANSIB3 DNA Transib 1821 2163 -720 7 596 1078 77 45 0 chrUextra 1569317 1569473 -27435183 + ROVER-LTR_DM LTR Gypsy 1 163 -204 7 596 1386 342 7 8 chrUextra 1569484 1570088 -27434568 + GTWIN_I LTR Gypsy 3329 3931 -2490 7 596 5569 50 1 3 chrUextra 1570193 1570873 -27433783 + R1_DM LINE R1 1101 1779 -3577 7 596 2589 20 138 0 chrUextra 1570873 1571315 -27433341 + R1_DM LINE R1 1974 2476 -2880 7 596 8825 22 71 8 chrUextra 1571415 1572487 -27432169 - CIRCE LINE Composite -1702 4654 3515 7 596 269 122 20 0 chrUextra 1572484 1572533 -27432123 + Gypsy9_I LTR Gypsy 1895 1944 -2733 7 74 9660 26 33 0 chrUextra 1572636 1573757 -27430899 - R1_DM LINE R1 -1939 3417 2260 7 597 5188 92 35 5 chrUextra 1573857 1574978 -27429678 + BATUMI_I LTR Pao 3994 4991 -2972 7 597 1948 85 214 18 chrUextra 1575078 1575628 -27429028 + ACCORD2_I LTR Gypsy 1114 1771 -5441 7 597 729 56 0 0 chrUextra 1575624 1575714 -27428942 + ACCORD2_I LTR Gypsy 7122 7211 -1 7 597 1781 28 9 19 chrUextra 1575712 1575928 -27428728 + ACCORD2_LTR LTR Gypsy 1 214 -1 7 597 2371 22 4 0 chrUextra 1575929 1576198 -27428458 + R1_DM LINE R1 2422 2691 -2665 7 597 279 183 70 102 chrUextra 1576420 1576548 -27428108 - BS LINE Jockey -4967 159 36 7 597 488 113 0 0 chrUextra 1576551 1576622 -27428034 + DMCR1A LINE CR1 2526 2596 -1874 7 597 1215 126 87 5 chrUextra 1576626 1576833 -27427823 + DMCR1A LINE CR1 2771 2994 -1476 7 597 992 127 7 0 chrUextra 1576827 1576977 -27427679 + DMCR1A LINE CR1 3247 3397 -1073 7 597 1011 117 42 58 chrUextra 1577225 1577415 -27427241 - DNAREP1_DM LINE Penelope -5 589 403 7 597 214 293 12 24 chrUextra 1578050 1578134 -27426522 + (CGA)n Simple_repeat Simple_repeat 2 84 0 7 597 618 300 86 13 chrUextra 1579016 1579330 -27425326 + NINJA_I LTR Pao 3188 3524 -2487 7 597 298 264 65 9 chrUextra 1579453 1579560 -27425096 + NINJA_I LTR Pao 4448 4560 -1451 7 597 1952 43 8 12 chrUextra 1580328 1580585 -27424071 + CIRCE LINE Composite 4981 5236 -1120 7 597 4343 18 18 0 chrUextra 1580583 1581076 -27423580 + CIRCE LINE Composite 5546 6047 -309 7 597 2539 0 0 4 chrUextra 1581176 1581456 -27423200 - POGO DNA Pogo -1842 279 1 7 597 2039 22 0 0 chrUextra 1581456 1581683 -27422973 + Invader2_LTR LTR Gypsy 40 266 0 7 597 515 0 0 0 chrUextra 1581683 1581744 -27422912 + Invader2_I LTR Gypsy 1 61 -4531 7 597 718 164 0 0 chrUextra 1581942 1582058 -27422598 + DMRT1A LINE R1 3762 3877 -1306 7 597 796 193 214 14 chrUextra 1582080 1582295 -27422361 + DMRT1A LINE R1 3954 4211 -972 7 597 7291 77 12 42 chrUextra 1582395 1583511 -27421145 - HETA LINE telomeric -4932 1149 67 7 597 2545 3 0 0 chrUextra 1583614 1583896 -27420760 - Copia_I LTR Copia -4311 282 1 7 597 2345 7 4 4 chrUextra 1583896 1584172 -27420484 - Copia_LTR LTR Copia 0 276 1 7 597 1050 180 30 19 chrUextra 1584177 1584733 -27419923 + SAR_DM Satellite Satellite 1 561 -1040 7 597 9517 21 12 0 chrUextra 1584836 1585952 -27418704 + TART LINE telomeric 8340 9469 -5008 7 597 3951 100 14 9 chrUextra 1586053 1586609 -27418047 - Gypsy12_I LTR Gypsy -4214 1332 774 7 597 3953 110 35 0 chrUextra 1586605 1587170 -27417486 - Gypsy12_I LTR Gypsy -1646 3900 3316 7 597 4764 13 0 0 chrUextra 1587270 1587795 -27416861 - MICROPIA_I LTR Gypsy -3546 930 406 7 597 2392 15 0 0 chrUextra 1587793 1588056 -27416600 - MICROPIA_I LTR Gypsy -4213 263 1 7 597 2458 7 0 96 chrUextra 1588056 1588388 -27416268 - MICROPIA_LTR LTR Gypsy 0 476 177 7 597 2391 104 164 17 chrUextra 1588488 1588910 -27415746 - DMCR1A LINE CR1 -1641 2829 2346 7 597 1388 283 102 6 chrUextra 1588946 1589605 -27415051 - Gypsy4_I LTR Gypsy -2589 3699 2893 7 597 4030 5 0 2 chrUextra 1589706 1590147 -27414509 - IVK_DM LINE I -15 5387 4948 7 597 2885 58 8 3 chrUextra 1590147 1590509 -27414147 + Gypsy10_LTR LTR Gypsy 1 364 0 7 597 2128 80 0 41 chrUextra 1590509 1590824 -27413832 + Gypsy10_I LTR Gypsy 1 302 -4976 7 597 2154 79 0 0 chrUextra 1590924 1591216 -27413440 - IDEFIX_I LTR Gypsy -1508 4120 3829 7 597 315 326 24 89 chrUextra 1591300 1591546 -27413110 + ACCORD2_I LTR Gypsy 526 755 -6457 7 597 869 302 43 49 chrUextra 1591574 1592040 -27412616 + MICROPIA_I LTR Gypsy 2 464 -4012 7 597 749 20 10 19 chrUextra 1592142 1592245 -27412411 - CIRCE LINE Composite -1274 5082 4981 7 597 1147 23 0 0 chrUextra 1592603 1592734 -27411922 - CIRCE LINE Composite -1376 4980 4850 7 597 4146 24 0 36 chrUextra 1592731 1593260 -27411396 - CIRCE LINE Composite -1644 4712 4203 7 597 6784 25 0 0 chrUextra 1593360 1594130 -27410526 - R1_DM LINE R1 -2823 2533 1764 7 597 1726 102 32 46 chrUextra 1594125 1594477 -27410179 - R1_DM LINE R1 -3640 1716 1377 7 597 4486 56 27 15 chrUextra 1594577 1595161 -27409495 - BATUMI_I LTR Pao -3825 4138 3548 7 597 3354 73 56 144 chrUextra 1595794 1596434 -27408222 - CIRCE LINE Composite -4800 1556 973 7 597 2687 69 46 0 chrUextra 1596561 1596911 -27407745 - CIRCE LINE Composite -5386 970 605 7 597 3160 12 0 0 chrUextra 1597011 1597356 -27407300 + Gypsy4_I LTR Gypsy 5944 6288 0 7 597 2562 24 0 0 chrUextra 1597356 1597643 -27407013 + Gypsy4_LTR LTR Gypsy 1 287 0 7 597 2597 59 343 0 chrUextra 1597643 1598128 -27406528 - DOC3_DM LINE Jockey -3851 889 238 7 597 1841 108 22 4 chrUextra 1598228 1598498 -27406158 + DM176_I LTR Gypsy 3332 3606 -2814 7 597 2547 178 102 11 chrUextra 1598526 1599056 -27405600 + DM176_I LTR Gypsy 3704 4281 -2139 7 597 1189 29 0 0 chrUextra 1599055 1599192 -27405464 - DMCR1A LINE CR1 -3534 936 800 7 597 796 62 80 0 chrUextra 1599190 1599302 -27405354 - DMCR1A LINE CR1 -4063 407 287 7 597 189 139 0 0 chrUextra 1599302 1599345 -27405311 + (GA)n Simple_repeat Simple_repeat 1 43 0 7 597 2706 31 0 9 chrUextra 1599445 1599768 -27404888 + R1_DM LINE R1 4950 5269 -87 7 597 1717 70 215 2 chrUextra 1599769 1600210 -27404446 + R1_DM LINE R1 77 611 -4745 7 597 1756 61 0 0 chrUextra 1600212 1600425 -27404231 + R1_DM LINE R1 1247 1459 -3897 7 597 1026 24 8 0 chrUextra 1600436 1600561 -27404095 + R1_DM LINE R1 1556 1681 -3675 7 597 1024 258 55 40 chrUextra 1600662 1601065 -27403591 - TOM_I LTR Gypsy -4389 1723 1315 7 597 2081 247 2 43 chrUextra 1601177 1601740 -27402916 - TOM_I LTR Gypsy -5087 1025 486 7 597 25 48 0 46 chrUextra 1602050 1602115 -27402541 + AT_rich Low_complexity Low_complexity 1 62 0 7 597 514 112 0 48 chrUextra 1602199 1602283 -27402373 + Baggins1 LINE LOA 5036 5115 -338 7 597 548 83 36 0 chrUextra 1602248 1602332 -27402324 - FB4_DM DNA Tc1 -3676 413 327 7 597 5508 43 0 9 chrUextra 1602335 1602993 -27401663 + Jockey2 LINE Jockey 2530 3181 -247 7 597 2649 105 28 21 chrUextra 1603097 1604209 -27400447 - DMSAT6 Satellite Satellite -66 1119 1 7 597 4134 2 0 0 chrUextra 1604309 1604752 -27399904 + TABOR_LTR LTR Gypsy 64 506 0 7 597 2411 178 11 16 chrUextra 1604752 1605424 -27399232 + Gypsy10_I LTR Gypsy 2867 3536 -2752 7 597 793 78 243 0 chrUextra 1605628 1605842 -27398814 + Invader2_LTR LTR Gypsy 1 266 0 7 597 5162 33 8 6 chrUextra 1605858 1606496 -27398160 + Invader2_I LTR Gypsy 2 640 -3952 7 597 1245 20 0 7 chrUextra 1606493 1606640 -27398016 + Invader2_I LTR Gypsy 1173 1318 -3274 7 597 1140 56 0 36 chrUextra 1606740 1606908 -27397748 + PROTOP_B DNA P 317 478 -675 7 597 1815 80 0 4 chrUextra 1606885 1607135 -27397521 + HOBO DNA hAT 330 578 -2438 7 597 581 81 0 0 chrUextra 1607132 1607206 -27397450 - Baggins1 LINE LOA -589 4864 4791 7 597 2936 37 34 0 chrUextra 1607313 1607663 -27396993 - Baggins1 LINE LOA -202 5251 4890 7 597 286 278 22 11 chrUextra 1608641 1608732 -27395924 - Invader4_I LTR Gypsy -539 1874 1783 7 597 9452 32 13 2 chrUextra 1609170 1610284 -27394372 + R1_DM LINE R1 1195 2320 -3036 7 597 4164 2 0 0 chrUextra 1610385 1610872 -27393784 + DOC6_DM LINE Jockey 3736 4222 0 7 597 1005 331 2 0 chrUextra 1611024 1611420 -27393236 - Copia2_I LTR Copia -54 4108 3712 7 597 4640 220 52 6 chrUextra 1611600 1612696 -27391960 - Stalker2_I LTR Gypsy -2458 4944 3262 7 597 955 283 216 7 chrUextra 1612988 1613558 -27391098 - BS LINE Jockey -3465 1661 973 7 597 2486 109 26 32 chrUextra 1614030 1615143 -27389513 + DMSAT6 Satellite Satellite 1 1105 -71 7 597 10302 2 4 0 chrUextra 1615243 1616357 -27388299 - TART LINE telomeric -6735 7742 6625 7 597 5698 25 52 14 chrUextra 1617671 1618484 -27386172 - PROTOP DNA P -3727 753 1 7 597 2575 30 10 3 chrUextra 1618484 1618784 -27385872 - DIVER2_I LTR Pao -518 3629 3328 7 597 3633 66 60 0 chrUextra 1618884 1619352 -27385304 + Baggins1 LINE LOA 4958 5453 0 7 597 24 0 0 0 chrUextra 1619389 1619413 -27385243 + AT_rich Low_complexity Low_complexity 1 24 0 7 597 496 0 0 0 chrUextra 1620097 1620150 -27384506 - ROVER-I_DM LTR Gypsy -6531 53 1 7 597 1455 125 59 116 chrUextra 1620150 1620539 -27384117 - ROVER-LTR_DM LTR Gypsy 0 367 1 7 597 21 0 0 0 chrUextra 1620571 1620592 -27384064 + AT_rich Low_complexity Low_complexity 1 21 0 7 597 4562 10 0 0 chrUextra 1621310 1621805 -27382851 + Copia2_I LTR Copia 1766 2260 -1902 7 597 5533 31 5 0 chrUextra 1621781 1622423 -27382233 + Copia2_I LTR Copia 2369 3013 -1149 7 597 3669 40 12 20 chrUextra 1622525 1623013 -27381643 - TRANSIB3 DNA Transib -9 2874 2391 7 597 4130 49 109 15 chrUextra 1623021 1623636 -27381020 - TRANSIB3 DNA Transib -1577 1306 634 7 597 5282 27 0 0 chrUextra 1623736 1624335 -27380321 + MAX_I LTR Pao 2972 3570 -4344 7 597 4488 33 2 0 chrUextra 1624334 1624849 -27379807 + MAX_I LTR Pao 4017 4532 -3382 7 597 8708 16 27 17 chrUextra 1624949 1625537 -27379119 - DM176_I LTR Gypsy -5313 1107 513 7 597 181 30 29 57 chrUextra 1625537 1625572 -27379084 + (TTA)n Simple_repeat Simple_repeat 3 36 0 7 597 8708 16 27 17 chrUextra 1625572 1626062 -27378594 - DM176_I LTR Gypsy -5908 512 18 7 597 1407 263 42 67 chrUextra 1626620 1627244 -27377412 - Gypsy12_LTR LTR Gypsy -1214 1122 515 7 597 5285 65 60 19 chrUextra 1627374 1628353 -27376303 - PROTOP_B DNA P -193 960 1 7 597 4467 35 0 9 chrUextra 1628586 1629110 -27375546 - BATUMI_I LTR Pao -1854 6109 5591 7 597 5078 33 0 0 chrUextra 1629117 1629698 -27374958 - BATUMI_I LTR Pao -2922 5041 4461 7 597 8309 51 6 0 chrUextra 1629798 1630868 -27373788 + QUASIMODO_I LTR Gypsy 3177 4252 -1808 7 597 1702 24 0 0 chrUextra 1631010 1631216 -27373440 - Invader2_I LTR Gypsy -4386 206 1 7 597 2473 4 0 0 chrUextra 1631216 1631482 -27373174 - Invader2_LTR LTR Gypsy 0 266 1 7 597 4874 11 0 0 chrUextra 1632222 1632759 -27371897 + MICROPIA_I LTR Gypsy 728 1264 -3212 7 597 716 22 0 0 chrUextra 1632752 1632842 -27371814 + BS LINE Jockey 5037 5126 0 7 597 4596 6 0 0 chrUextra 1632838 1633334 -27371322 + MICROPIA_I LTR Gypsy 1249 1744 -2732 7 597 561 30 0 0 chrUextra 1634006 1634073 -27370583 + (TAA)n Simple_repeat Simple_repeat 2 68 0 7 597 1781 5 0 0 chrUextra 1634073 1634271 -27370385 - Copia2_LTR_DM LTR Copia 0 198 1 7 597 2314 18 0 0 chrUextra 1634271 1634546 -27370110 - Copia2_I LTR Copia 0 4162 3888 7 597 5900 2 2 0 chrUextra 1634646 1635282 -27369374 - DOC LINE Jockey -4088 637 1 7 597 2096 199 10 6 chrUextra 1635276 1635757 -27368899 + SAR_DM Satellite Satellite 267 749 -723 7 597 9234 3 9 0 chrUextra 1635971 1636968 -27367688 + SSU-rRNA_Dme rRNA rRNA 1 1006 -989 7 597 2817 34 3 0 chrUextra 1637068 1637387 -27367269 - DIVER_I LTR Pao -2032 3611 3292 7 597 1109 100 4 33 chrUextra 1637387 1637574 -27367082 - STALKER4_LTR LTR Gypsy -3 399 227 7 597 3813 5 7 2 chrUextra 1637574 1637995 -27366661 - Invader1_LTR LTR Gypsy 0 423 1 7 597 1538 16 11 0 chrUextra 1637995 1638179 -27366477 - Invader1_I LTR Gypsy 0 3186 3001 7 597 5514 171 5 36 chrUextra 1638286 1639387 -27365269 - HETA LINE telomeric -2282 3799 2734 7 597 302 0 0 0 chrUextra 1639490 1639523 -27365133 + Invader2_I LTR Gypsy 4560 4592 0 7 597 2406 15 0 0 chrUextra 1639523 1639789 -27364867 + Invader2_LTR LTR Gypsy 1 266 0 7 597 3198 40 0 0 chrUextra 1639789 1640165 -27364491 - PROTOP DNA P -4104 376 1 7 597 688 234 286 19 chrUextra 1640335 1640601 -27364055 - TAHRE LINE telomeric -188 10275 9939 7 597 6385 3 0 1 chrUextra 1640701 1641391 -27363265 - R2_DM LINE R2 -2916 691 3 7 597 3875 2 0 0 chrUextra 1641392 1641812 -27362844 - LSU-rRNA_Dme rRNA rRNA -1401 2499 2080 7 597 8997 48 10 3 chrUextra 1641912 1643022 -27361634 - R1_DM LINE R1 -4067 1289 172 7 597 27 29 0 0 chrUextra 1643137 1643171 -27361485 + AT_rich Low_complexity Low_complexity 1 34 0 7 597 875 28 19 9 chrUextra 1643494 1643601 -27361055 + Baggins1 LINE LOA 5346 5453 0 7 597 1524 52 5 0 chrUextra 1644041 1644232 -27360424 + Baggins1 LINE LOA 4791 4982 -471 7 597 1823 28 37 0 chrUextra 1644332 1644547 -27360109 - PROTOP_B DNA P -930 223 1 7 597 879 81 0 0 chrUextra 1644547 1644666 -27359990 + STALKER4_LTR LTR Gypsy 48 166 -236 7 597 52 41 0 0 chrUextra 1644978 1645051 -27359605 + AT_rich Low_complexity Low_complexity 1 73 0 7 597 21 36 0 0 chrUextra 1645100 1645128 -27359528 + AT_rich Low_complexity Low_complexity 1 28 0 7 597 234 229 0 0 chrUextra 1645391 1645439 -27359217 + HMSBEAGLE_I LTR Gypsy 1812 1859 -4670 7 597 3918 26 69 16 chrUextra 1645544 1646053 -27358603 + PROTOP_A DNA P 570 1105 0 7 597 5244 3 0 15 chrUextra 1646752 1647335 -27357321 - DOC LINE Jockey -4120 605 32 7 597 280 154 0 0 chrUextra 1647372 1647424 -27357232 - BS LINE Jockey -3054 2072 2021 7 597 1309 103 0 118 chrUextra 1647585 1647839 -27356817 + DIVER_LTR LTR Pao 1 224 0 7 597 4574 8 0 2 chrUextra 1647962 1648475 -27356181 - G6_DM LINE Jockey -1529 513 2 7 597 39 50 0 0 chrUextra 1648595 1648655 -27356001 + AT_rich Low_complexity Low_complexity 1 60 0 7 597 26 50 0 0 chrUextra 1648826 1648866 -27355790 + AT_rich Low_complexity Low_complexity 1 40 0 7 597 1439 41 0 0 chrUextra 1648901 1649072 -27355584 + ROO_LTR LTR Pao 1 171 -257 7 597 2550 108 14 29 chrUextra 1649172 1650282 -27354374 - DMSAT6 Satellite Satellite -101 1094 1 7 597 640 191 7 47 chrUextra 1650382 1650530 -27354126 - DOC LINE Jockey -437 4288 4147 7 597 46 0 0 0 chrUextra 1650564 1650610 -27354046 + AT_rich Low_complexity Low_complexity 1 46 0 7 597 1824 36 5 0 chrUextra 1650628 1650848 -27353808 + S2_DM DNA Tc1 748 968 -767 7 597 693 123 261 15 chrUextra 1650849 1651121 -27353535 - IDEFIX_LTR LTR Gypsy -253 341 3 7 597 2226 109 11 14 chrUextra 1651120 1651491 -27353165 - IDEFIX_I LTR Gypsy -2 5626 5257 7 597 5925 5 0 0 chrUextra 1651592 1652229 -27352427 - BS2 LINE Jockey -3882 839 203 7 597 4128 0 0 0 chrUextra 1652251 1652702 -27351954 + ACCORD_I LTR Gypsy 3490 3940 -2348 7 597 2347 112 92 33 chrUextra 1652802 1653283 -27351373 + STALKER4_I LTR Gypsy 703 1211 -5319 7 597 2614 17 3 0 chrUextra 1653283 1653580 -27351076 + Invader3_LTR LTR Gypsy 1 298 0 7 597 3064 0 0 0 chrUextra 1653580 1653911 -27350745 + Invader3_I LTR Gypsy 1 331 -4557 7 597 9103 32 18 19 chrUextra 1654011 1655120 -27349536 - R1_DM LINE R1 -419 4937 3830 7 597 9591 28 2 0 chrUextra 1655220 1656329 -27348327 - R1_DM LINE R1 -2441 2915 1805 7 597 9362 30 30 4 chrUextra 1656429 1657538 -27347118 - R1_DM LINE R1 -3050 2306 1169 7 597 1944 184 54 30 chrUextra 1657638 1658099 -27346557 + Stalker2_I LTR Gypsy 342 813 -6589 7 597 5063 13 26 5 chrUextra 1658096 1658108 -27346548 + STALKER4_I LTR Gypsy 2990 3002 -3528 7 597 281 47 0 23 chrUextra 1658108 1658152 -27346504 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 7 597 5063 13 26 5 chrUextra 1658152 1658746 -27345910 + STALKER4_I LTR Gypsy 3003 3609 -2921 7 597 6369 37 53 10 chrUextra 1658846 1659671 -27344985 + Transib5 DNA Transib 1550 2410 -591 7 597 846 79 18 0 chrUextra 1659674 1659788 -27344868 - DMCR1A LINE CR1 -2 4468 4353 7 597 1346 43 0 0 chrUextra 1659790 1659954 -27344702 - DMCR1A LINE CR1 -236 4234 4071 7 597 9798 18 0 0 chrUextra 1660054 1661162 -27343494 - NINJA_I LTR Pao -4368 1643 536 7 597 4481 206 14 38 chrUextra 1661262 1662370 -27342286 + HETA LINE telomeric 3044 4124 -1957 7 597 2270 19 4 0 chrUextra 1662470 1662726 -27341930 + PROTOP_A DNA P 849 1105 0 7 597 664 131 145 16 chrUextra 1662776 1662900 -27341756 - DNAREP1_DM LINE Penelope -128 466 327 7 597 705 200 14 7 chrUextra 1662933 1663074 -27341582 - Invader3_I LTR Gypsy -4068 820 679 7 597 249 203 0 33 chrUextra 1663070 1663131 -27341525 + DMCR1A LINE CR1 4411 4469 -1 7 597 1973 184 73 14 chrUextra 1663152 1663577 -27341079 - DMCR1A LINE CR1 -1499 2971 2522 7 597 273 253 90 50 chrUextra 1663747 1663847 -27340809 + DNAREP1_DM LINE Penelope 489 592 -2 7 597 356 161 10 147 chrUextra 1664086 1664188 -27340468 - DNAREP1_DM LINE Penelope -6 588 501 7 597 1054 69 69 0 chrUextra 1664192 1664352 -27340304 + S2_DM DNA Tc1 1 171 -1564 7 597 348 173 0 58 chrUextra 1664371 1664457 -27340199 - DNAREP1_DM LINE Penelope -26 568 488 7 597 286 175 117 58 chrUextra 1664580 1664683 -27339973 - Gypsy2_LTR LTR Gypsy -150 203 95 7 597 258 286 0 0 chrUextra 1664697 1664767 -27339889 - Gypsy2_I LTR Gypsy -91 6044 5975 7 597 315 188 112 0 chrUextra 1664897 1664977 -27339679 - DNAREP1_DM LINE Penelope -439 155 67 7 597 612 208 70 13 chrUextra 1665111 1665267 -27339389 + HETRP_DM Satellite Satellite 1518 1682 -190 7 597 612 208 70 13 chrUextra 1665398 1665554 -27339102 + HETRP_DM Satellite Satellite 1518 1682 -190 7 597 817 170 32 19 chrUextra 1665684 1665840 -27338816 + HETRP_DM Satellite Satellite 1518 1675 -197 7 597 842 134 7 14 chrUextra 1665847 1665991 -27338665 - HOBO DNA hAT 0 3016 2874 7 597 817 53 0 42 chrUextra 1666094 1666212 -27338444 - Gypsy4_LTR LTR Gypsy -174 113 1 7 597 939 34 264 0 chrUextra 1666627 1666771 -27337885 - PROTOP_B DNA P -971 182 1 7 597 333 89 0 0 chrUextra 1666774 1666819 -27337837 + DMRT1B LINE R1 5125 5169 -14 7 597 977 156 61 0 chrUextra 1667017 1667197 -27337459 + Invader3_I LTR Gypsy 4491 4681 -207 7 597 4609 135 55 38 chrUextra 1667297 1668403 -27336253 + DM297_I LTR Gypsy 2278 3389 -2778 7 597 361 285 103 27 chrUextra 1668641 1668825 -27335831 - Ulysses_I LTR Gypsy -1486 4895 4698 7 597 265 298 11 11 chrUextra 1668840 1668935 -27335721 - Ulysses_I LTR Gypsy -1762 4619 4525 7 597 235 118 0 0 chrUextra 1669440 1669474 -27335182 + Gypsy8_LTR LTR Gypsy 8 41 -263 7 597 877 84 8 18 chrUextra 1669709 1670324 -27334332 - RSP Satellite Satellite -83 609 1 7 597 961 80 29 22 chrUextra 1670350 1670814 -27333842 - RSP Satellite Satellite 0 467 1 7 597 815 30 0 20 chrUextra 1670914 1671015 -27333641 + R1_DM LINE R1 5258 5356 0 7 597 7396 59 3 24 chrUextra 1671048 1672019 -27332637 + R1_DM LINE R1 1 951 -4405 7 597 4758 56 32 15 chrUextra 1672119 1673224 -27331432 + STALKER4_I LTR Gypsy 866 2073 -4457 7 597 1914 47 54 0 chrUextra 1673325 1673759 -27330897 - DOC2_DM LINE Jockey -4296 497 6 7 597 1918 279 28 16 chrUextra 1673783 1674399 -27330257 - TOM_I LTR Gypsy -880 5232 4610 7 597 265 196 36 0 chrUextra 1674373 1674429 -27330227 - DM176_I LTR Gypsy -2846 3574 3517 7 597 2443 45 3 6 chrUextra 1674529 1674842 -27329814 + Gypsy6A_LTR LTR Gypsy 13 408 -12 7 597 6169 23 24 61 chrUextra 1674842 1675634 -27329022 + Gypsy12_LTR LTR Gypsy 1 763 -1573 7 597 4715 19 4 0 chrUextra 1675734 1676266 -27328390 + R2_DM LINE R2 2750 3283 -324 7 597 2328 193 6 44 chrUextra 1676340 1676838 -27327818 - Gypsy12_LTR LTR Gypsy -1777 559 81 7 597 9176 52 0 1 chrUextra 1676938 1678042 -27326614 + HETA LINE telomeric 1639 2741 -3340 7 597 1398 303 70 36 chrUextra 1678144 1679244 -27325412 + MDG1_I LTR Gypsy 1811 2947 -3649 7 597 1698 45 0 0 chrUextra 1679346 1679547 -27325109 - PROTOP_A DNA P -904 201 1 7 597 917 228 91 13 chrUextra 1679547 1679778 -27324878 - TOM_I LTR Gypsy -2137 3975 3727 7 597 275 235 15 0 chrUextra 1679852 1679920 -27324736 - TOM_I LTR Gypsy -3053 3059 2991 7 597 1671 44 126 9 chrUextra 1679907 1680138 -27324518 - Baggins1 LINE LOA -4495 958 701 7 597 1727 154 17 23 chrUextra 1680138 1680437 -27324219 + Gypsy12_LTR LTR Gypsy 1 297 -2039 7 597 9200 46 1 0 chrUextra 1680550 1681653 -27323003 - TAHRE LINE telomeric -4154 6309 5206 7 597 3502 8 0 0 chrUextra 1681753 1682133 -27322523 + Invader1_I LTR Gypsy 1458 1837 -1349 7 597 1948 304 70 17 chrUextra 1682960 1683896 -27320760 + Gypsy4_I LTR Gypsy 3727 4712 -1576 7 597 3843 244 73 23 chrUextra 1685372 1686461 -27318195 - Gypsy6_I LTR Gypsy -664 6348 5205 7 597 9438 27 31 0 chrUextra 1686561 1687663 -27316993 - R1_DM LINE R1 -2021 3335 2200 7 597 2364 58 409 2 chrUextra 1687824 1688301 -27316355 + PROTOP_B DNA P 176 847 -306 7 597 3029 150 7 24 chrUextra 1688273 1688857 -27315799 - Jockey2 LINE Jockey -1586 1842 1419 7 597 339 26 0 0 chrUextra 1688965 1689004 -27315652 + DM176_I LTR Gypsy 6382 6420 0 7 597 243 228 11 151 chrUextra 1689060 1689153 -27315503 + DMTOM1_LTR LTR Gypsy 190 269 -238 7 597 597 186 45 57 chrUextra 1689262 1689472 -27315184 + DMTOM1_LTR LTR Gypsy 284 488 -19 7 597 419 100 14 28 chrUextra 1689463 1689535 -27315121 + DMTOM1_LTR LTR Gypsy 340 410 0 7 597 3396 68 16 22 chrUextra 1689535 1690066 -27314590 + MDG1_I LTR Gypsy 5756 6499 -97 7 597 2446 87 34 21 chrUextra 1690166 1690558 -27314098 + Gypsy6A_LTR LTR Gypsy 25 420 0 7 597 1012 168 102 15 chrUextra 1690658 1690863 -27313793 + DMLTR5 LTR Gypsy 44 266 0 7 597 351 93 661 14 chrUextra 1690862 1690994 -27313662 + HMSBEAGLE_I LTR Gypsy 1 221 -6308 7 597 9419 20 1 0 chrUextra 1691368 1692429 -27312227 + R1_DM LINE R1 4005 5066 -290 7 597 360 48 0 0 chrUextra 1692426 1692468 -27312188 + R1_DM LINE R1 5243 5284 -72 7 597 4308 23 2 0 chrUextra 1692568 1693087 -27311569 - Invader2_I LTR Gypsy -310 4282 3763 7 597 4676 26 12 0 chrUextra 1693095 1693669 -27310987 - Invader2_I LTR Gypsy -1245 3347 2767 7 597 1032 115 0 42 chrUextra 1693769 1693959 -27310697 + Invader1_I LTR Gypsy 2959 3140 -46 7 597 355 120 0 0 chrUextra 1694007 1694057 -27310599 + Invader1_I LTR Gypsy 3137 3186 0 7 597 1064 98 270 24 chrUextra 1694058 1694397 -27310259 + Invader1_LTR LTR Gypsy 2 423 0 7 597 1443 149 151 92 chrUextra 1694433 1694870 -27309786 - HMSBEAGLE_I LTR Gypsy -5891 638 176 7 597 582 0 0 15 chrUextra 1694970 1695037 -27309619 - MICROPIA_I LTR Gypsy -4410 66 1 7 597 4132 13 0 61 chrUextra 1695037 1695544 -27309112 - MICROPIA_LTR LTR Gypsy 0 476 1 7 597 3754 4 0 61 chrUextra 1695544 1696070 -27308586 - ROVER-I_DM LTR Gypsy -5681 903 410 7 597 2525 79 34 22 chrUextra 1696170 1696559 -27308097 + Gypsy6A_LTR LTR Gypsy 28 420 0 7 597 302 167 35 12 chrUextra 1696559 1696641 -27308015 + NTS_DM Other Other 122 205 -35 7 597 307 104 21 0 chrUextra 1696667 1696715 -27307941 + NTS_DM Other Other 1 49 -191 7 597 1107 154 29 21 chrUextra 1696797 1697035 -27307621 + NTS_DM Other Other 1 240 0 7 597 326 83 21 0 chrUextra 1697035 1697083 -27307573 + NTS_DM Other Other 1 49 -191 7 597 1470 44 5 16 chrUextra 1697085 1697270 -27307386 + G2_DM LINE Jockey 1401 1583 -1519 7 597 2997 94 19 46 chrUextra 1697370 1697849 -27306807 + TART LINE telomeric 6965 7430 -7047 7 597 1825 160 19 101 chrUextra 1697848 1698470 -27306186 + TART LINE telomeric 6655 6997 -7480 7 597 22 0 0 0 chrUextra 1699093 1699115 -27305541 + AT_rich Low_complexity Low_complexity 1 22 0 7 597 9181 16 10 6 chrUextra 1699770 1700870 -27303786 + QUASIMODO_I LTR Gypsy 808 1912 -4148 7 597 7420 17 17 2 chrUextra 1700970 1701809 -27302847 + Gypsy4_I LTR Gypsy 5438 6288 0 7 597 2353 11 4 0 chrUextra 1701809 1702070 -27302586 + Gypsy4_LTR LTR Gypsy 1 262 -25 7 597 9005 38 9 22 chrUextra 1702170 1703270 -27301386 + Gypsy3_I LTR Gypsy 1114 2199 -3978 7 74 2560 105 13 25 chrUextra 1703787 1704469 -27300187 + DMSAT6 Satellite Satellite 1 673 -37 7 598 3765 49 104 28 chrUextra 1704569 1705135 -27299521 + ROO_I LTR Pao 234 842 -7414 7 598 2058 25 0 0 chrUextra 1705171 1705411 -27299245 - FW_DM LINE Jockey -1853 2839 2600 7 598 2293 19 0 0 chrUextra 1705410 1705668 -27298988 - FW_DM LINE Jockey -2499 2193 1936 7 598 2294 56 0 10 chrUextra 1705768 1706056 -27298600 - MAX_I LTR Pao -5162 2752 2468 7 598 6147 53 26 17 chrUextra 1706034 1706855 -27297801 - MAX_I LTR Pao -5870 2044 1217 7 598 9485 30 3 4 chrUextra 1706967 1708065 -27296591 + MAX_I LTR Pao 4099 5195 -2719 7 598 2539 113 25 47 chrUextra 1708165 1709263 -27295393 - DMSAT6 Satellite Satellite -210 1073 1 7 598 2773 7 0 0 chrUextra 1709363 1709665 -27294991 - BARI_DM DNA Tc1 -1423 305 4 7 598 2293 4 0 0 chrUextra 1709665 1709918 -27294738 - BARI_DM DNA Tc1 -1 1727 1475 7 598 5125 2 0 0 chrUextra 1709902 1710461 -27294195 - BARI_DM DNA Tc1 -208 1520 962 7 598 708 191 13 26 chrUextra 1710581 1710737 -27293919 - HETRP_DM Satellite Satellite -190 1682 1529 7 598 705 191 13 26 chrUextra 1710858 1711014 -27293642 - HETRP_DM Satellite Satellite -190 1682 1529 7 598 721 184 13 26 chrUextra 1711138 1711294 -27293362 - HETRP_DM Satellite Satellite -190 1682 1529 7 598 691 196 11 69 chrUextra 1711418 1711593 -27293063 - HETRP_DM Satellite Satellite -190 1682 1518 7 598 4209 79 19 26 chrUextra 1711866 1712728 -27291928 - PROTOP_A DNA P 0 1153 297 7 598 293 188 0 0 chrUextra 1712728 1712792 -27291864 - Gypsy8_I LTR Gypsy -4054 293 230 7 598 4738 216 31 6 chrUextra 1712961 1714055 -27290601 - TOM_I LTR Gypsy -3041 3071 1951 7 598 2939 92 107 23 chrUextra 1714155 1714631 -27290025 - TART LINE telomeric -6843 7634 7119 7 598 2463 179 86 14 chrUextra 1714624 1715253 -27289403 - TART LINE telomeric -4911 9566 8957 7 598 1002 41 16 0 chrUextra 1715373 1715495 -27289161 - Baggins1 LINE LOA -15 5438 5315 7 598 1817 37 124 0 chrUextra 1715491 1715732 -27288924 - Baggins1 LINE LOA -456 4997 4727 7 598 23 50 0 48 chrUextra 1716192 1716255 -27288401 + AT_rich Low_complexity Low_complexity 1 60 0 7 598 2813 157 46 26 chrUextra 1716581 1717149 -27287507 - Stalker2_I LTR Gypsy -6547 855 277 7 598 219 36 0 0 chrUextra 1717150 1717178 -27287478 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 7 598 4424 2 0 0 chrUextra 1717178 1717649 -27287007 - BS LINE Jockey -28 5098 4628 7 598 2203 188 69 15 chrUextra 1717753 1718233 -27286423 + DMCR1A LINE CR1 2466 2971 -1499 7 598 249 203 0 33 chrUextra 1718254 1718315 -27286341 - DMCR1A LINE CR1 -1 4469 4411 7 598 3046 186 13 2 chrUextra 1718308 1718846 -27285810 + Invader3_I LTR Gypsy 675 1218 -3670 7 598 1508 6 6 6 chrUextra 1718947 1719123 -27285533 + QUASIMODO_LTR LTR Gypsy 483 658 0 7 598 7862 7 8 25 chrUextra 1719123 1720044 -27284612 + QUASIMODO_I LTR Gypsy 1 905 -5155 7 598 2095 151 12 86 chrUextra 1720144 1720894 -27283762 - TART LINE telomeric -10472 4005 3684 7 598 1713 119 37 91 chrUextra 1720890 1721241 -27283415 - TART LINE telomeric -11115 3362 3031 7 598 4879 53 33 20 chrUextra 1721341 1722031 -27282625 - ROO_I LTR Pao -6768 1488 790 7 598 352 21 0 0 chrUextra 1722390 1722438 -27282218 - ROO_I LTR Pao -7460 796 749 7 598 3749 45 44 10 chrUextra 1722538 1723034 -27281622 + DMCR1A LINE CR1 3958 4470 0 7 598 356 57 0 70 chrUextra 1723040 1723097 -27281559 + DNAREP1_DM LINE Penelope 508 560 -34 7 598 32 43 0 0 chrUextra 1723116 1723162 -27281494 + AT_rich Low_complexity Low_complexity 1 46 0 7 598 806 148 196 5 chrUextra 1724175 1724379 -27280277 - DNAREP1_DM LINE Penelope -70 524 282 7 598 1646 215 100 41 chrUextra 1724934 1725487 -27279169 + Gypsy12_LTR LTR Gypsy 1159 1726 -554 7 598 685 152 88 0 chrUextra 1725497 1725622 -27279034 + Gypsy12A_LTR LTR Gypsy 2127 2262 -18 7 598 838 253 65 47 chrUextra 1725629 1725907 -27278749 + TAHRE LINE telomeric 9807 10089 -374 7 598 529 125 89 0 chrUextra 1725907 1726019 -27278637 + TART LINE telomeric 10370 10491 -3986 7 598 9574 24 1 0 chrUextra 1726131 1727224 -27277432 - R1_DM LINE R1 -61 5295 4202 7 598 186 43 0 0 chrUextra 1728184 1728207 -27276449 + (CTG)n Simple_repeat Simple_repeat 3 25 0 7 598 4738 59 60 37 chrUextra 1728528 1729520 -27275136 + TRANSIB1 DNA Transib 491 1381 -1633 7 598 600 36 83 0 chrUextra 1729525 1729609 -27275047 + ACCORD2_I LTR Gypsy 2412 2502 -4710 7 598 4568 118 42 7 chrUextra 1729715 1730429 -27274227 + HETA LINE telomeric 2449 3187 -2894 7 598 905 95 35 24 chrUextra 1730591 1730810 -27273846 + TART LINE telomeric 9650 9822 -4655 7 598 8239 98 8 0 chrUextra 1730910 1732005 -27272651 - Gypsy12_I LTR Gypsy -735 4811 3708 7 598 9287 29 4 2 chrUextra 1732105 1733200 -27271456 - R1_DM LINE R1 -1244 4112 3016 7 598 4525 18 0 0 chrUextra 1733300 1733809 -27270847 - R1_DM LINE R1 -2890 2466 1958 7 598 4648 55 0 3 chrUextra 1733809 1734395 -27270261 - R1_DM LINE R1 -4558 798 215 7 598 4459 12 4 0 chrUextra 1734495 1734995 -27269661 - R1_DM LINE R1 -4854 502 1 7 598 501 18 0 0 chrUextra 1734995 1735050 -27269606 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2578 7 598 4419 2 79 2 chrUextra 1735047 1735590 -27269066 - R2_DM LINE R2 -13 3594 3010 7 598 5089 211 29 2 chrUextra 1735695 1736778 -27267878 + DM412 LTR Gypsy 3536 4647 -2250 7 598 239 167 21 0 chrUextra 1736887 1736935 -27267721 - NTS_DM Other Other -191 49 1 7 598 1079 138 39 22 chrUextra 1736935 1737164 -27267492 - NTS_DM Other Other 0 240 8 7 598 227 195 45 68 chrUextra 1737171 1737259 -27267397 - NTS_DM Other Other 0 240 155 7 598 296 125 21 0 chrUextra 1737262 1737310 -27267346 - NTS_DM Other Other -191 49 1 7 598 1172 129 15 5 chrUextra 1737341 1737544 -27267112 - NTS_DM Other Other -35 205 1 7 598 242 119 24 0 chrUextra 1737634 1737676 -27266980 - NTS_DM Other Other -191 49 7 7 598 463 121 70 39 chrUextra 1737682 1737811 -27266845 - NTS_DM Other Other 0 240 108 7 598 868 115 0 0 chrUextra 1737819 1737949 -27266707 - NTS_DM Other Other -103 137 8 7 598 2741 185 12 19 chrUextra 1738078 1739172 -27265484 - SAR_DM Satellite Satellite -444 1086 1 7 598 8896 28 1 1 chrUextra 1739272 1740303 -27264353 + R1_DM LINE R1 4326 5356 0 7 598 229 33 0 0 chrUextra 1740336 1740366 -27264290 + R1_DM LINE R1 1 30 -5326 7 598 4486 10 0 4 chrUextra 1740466 1740980 -27263676 + TART LINE telomeric 13966 14477 0 7 598 4428 65 9 0 chrUextra 1740986 1741560 -27263096 + HETA LINE telomeric 3839 4417 -1664 7 598 9393 25 0 2 chrUextra 1741660 1742750 -27261906 - R1_DM LINE R1 -2331 3025 1938 7 598 2434 242 95 64 chrUextra 1742859 1743786 -27260870 - Gypsy12_LTR LTR Gypsy -1368 968 13 7 598 1092 81 0 13 chrUextra 1743798 1743948 -27260708 - Gypsy12_I LTR Gypsy 0 5546 5399 7 598 3493 52 4 13 chrUextra 1744048 1744501 -27260155 + BATUMI_I LTR Pao 3182 3630 -4333 7 598 4810 65 0 5 chrUextra 1744482 1745089 -27259567 + BATUMI_I LTR Pao 4316 4919 -3044 7 598 478 77 0 0 chrUextra 1745077 1745142 -27259514 + BATUMI_I LTR Pao 5395 5459 -2504 7 598 8112 66 25 8 chrUextra 1745242 1746336 -27258320 - QUASIMODO_I LTR Gypsy -4461 1599 488 7 598 3268 45 17 63 chrUextra 1746436 1746913 -27257743 + DOC5_DM LINE Jockey 4197 4651 -31 7 598 242 0 61 0 chrUextra 1746915 1746948 -27257708 + (TATAA)n Simple_repeat Simple_repeat 2 36 0 7 598 5758 3 0 0 chrUextra 1747629 1748257 -27256399 + QUASIMODO_LTR LTR Gypsy 31 658 0 7 598 1901 39 0 41 chrUextra 1748257 1748523 -27256133 + BATUMI_I LTR Pao 668 922 -7041 7 598 1625 31 0 10 chrUextra 1748523 1748718 -27255938 + BATUMI_I LTR Pao 1630 1822 -6141 7 598 303 54 0 0 chrUextra 1748822 1748859 -27255797 + R1_DM LINE R1 5320 5356 0 7 598 4746 66 7 3 chrUextra 1748892 1749502 -27255154 + R1_DM LINE R1 1 612 -4744 7 598 1822 59 86 2 chrUextra 1749487 1749915 -27254741 + R1_DM LINE R1 1384 1847 -3509 7 598 1014 17 25 0 chrUextra 1750387 1750505 -27254151 + PROTOP_B DNA P 55 175 -978 7 598 3133 76 53 25 chrUextra 1750512 1751108 -27253548 + PROTOP_A DNA P 512 1081 -72 7 598 4693 55 45 0 chrUextra 1751208 1751803 -27252853 + TART_B1 LINE telomeric 2904 3525 -7129 7 598 3646 103 36 0 chrUextra 1751797 1752301 -27252355 + TART_B1 LINE telomeric 4319 4840 -5814 7 598 9466 18 15 1 chrUextra 1752401 1753494 -27251162 - R1_DM LINE R1 -1317 4039 2932 7 598 6621 67 53 69 chrUextra 1753594 1754687 -27249969 - ROO_I LTR Pao -6661 1595 520 7 598 9309 34 7 0 chrUextra 1754787 1755880 -27248776 + R1_DM LINE R1 1238 2338 -3018 7 598 343 80 0 39 chrUextra 1755980 1756032 -27248624 - DMTOM1_LTR LTR Gypsy -21 389 340 7 598 611 186 45 57 chrUextra 1756023 1756233 -27248423 - DMTOM1_LTR LTR Gypsy -19 488 284 7 598 41 58 0 0 chrUextra 1756517 1756586 -27248070 + AT_rich Low_complexity Low_complexity 1 69 0 7 598 24 106 0 0 chrUextra 1756969 1757063 -27247593 + AT_rich Low_complexity Low_complexity 1 94 0 7 598 21 89 0 0 chrUextra 1757661 1757717 -27246939 + AT_rich Low_complexity Low_complexity 1 56 0 7 598 21 89 0 0 chrUextra 1757807 1757863 -27246793 + AT_rich Low_complexity Low_complexity 1 56 0 7 598 29 47 0 0 chrUextra 1757901 1757944 -27246712 + AT_rich Low_complexity Low_complexity 1 43 0 7 598 28 71 0 0 chrUextra 1757988 1758044 -27246612 + AT_rich Low_complexity Low_complexity 1 56 0 7 598 668 37 37 0 chrUextra 1758183 1758264 -27246392 - PROTOP DNA P -3968 512 429 7 598 8856 44 4 4 chrUextra 1758364 1759455 -27245201 + IDEFIX_I LTR Gypsy 2321 3411 -2217 7 598 300 29 0 0 chrUextra 1760139 1760173 -27244483 + G2_DM LINE Jockey 2657 2690 -412 7 598 412 20 0 0 chrUextra 1760168 1760217 -27244439 - ROO_I LTR Pao -2762 5494 5446 7 598 3503 21 67 0 chrUextra 1760213 1760648 -27244008 - ROO_I LTR Pao -2970 5286 4823 7 598 4570 151 67 43 chrUextra 1760748 1761736 -27242920 + R1_DM LINE R1 4346 5356 0 7 598 544 31 0 0 chrUextra 1761769 1761834 -27242822 + R1_DM LINE R1 1 65 -5291 7 598 1081 40 67 0 chrUextra 1761940 1762089 -27242567 + PROTOP DNA P 3076 3234 -1246 7 598 786 21 0 11 chrUextra 1763132 1763226 -27241430 - NINJA_I LTR Pao -5918 93 1 7 598 2545 41 3 28 chrUextra 1763226 1763551 -27241105 - NINJA_LTR LTR Pao 0 317 1 7 598 803 64 9 0 chrUextra 1763551 1763661 -27240995 + G5_DM LINE Jockey 4737 4847 -9 7 598 307 178 439 8 chrUextra 1763693 1763823 -27240833 + PROTOP DNA P 1 186 -4294 7 598 3121 13 0 3 chrUextra 1764323 1764714 -27239942 - DM297_I LTR Gypsy -229 5938 5549 7 598 6131 13 0 0 chrUextra 1764705 1765414 -27239242 - DM297_I LTR Gypsy -1444 4723 4015 7 598 2553 0 3 3 chrUextra 1765514 1765797 -27238859 + Copia_I LTR Copia 4311 4593 0 7 598 2468 0 0 0 chrUextra 1765797 1766073 -27238583 + Copia_LTR LTR Copia 1 276 0 7 598 2445 192 11 8 chrUextra 1766070 1766605 -27238051 + SAR_DM Satellite Satellite 263 799 -673 7 598 4169 196 27 32 chrUextra 1766705 1767796 -27236860 + SAR_DM Satellite Satellite 67 1151 -321 7 598 3375 34 0 0 chrUextra 1767901 1768289 -27236367 - FW_DM LINE Jockey -4296 396 9 7 598 3116 213 59 0 chrUextra 1768306 1768987 -27235669 - ROVER-I_DM LTR Gypsy -2795 3789 3069 7 598 4959 26 3 0 chrUextra 1769087 1769660 -27234996 + DM1731_I LTR Copia 358 932 -3044 7 598 4728 4 2 0 chrUextra 1769661 1770178 -27234478 + IVK_DM LINE I 4744 5261 -141 7 598 4664 50 44 5 chrUextra 1770278 1770865 -27233791 + DMCR1A LINE CR1 1263 1872 -2598 7 598 2068 94 45 0 chrUextra 1770876 1771164 -27233492 + DMCR1A LINE CR1 3220 3520 -950 7 598 1655 57 42 0 chrUextra 1771157 1771369 -27233287 + DMCR1A LINE CR1 3655 3875 -595 7 598 2593 263 57 13 chrUextra 1771667 1772560 -27232096 + G6_DM LINE Jockey 243 1174 -868 7 598 310 220 98 41 chrUextra 1775129 1775252 -27229404 + Gypsy4_I LTR Gypsy 3461 3590 -2698 7 598 440 306 152 36 chrUextra 1775314 1775616 -27229040 + Gypsy4_I LTR Gypsy 4323 4659 -1629 7 598 307 141 263 32 chrUextra 1775588 1775683 -27228973 + BURDOCK_I LTR Gypsy 4727 4843 -1017 7 598 1333 132 123 4 chrUextra 1775720 1775964 -27228692 - DNAREP1_DM LINE Penelope -321 273 1 7 598 300 273 11 74 chrUextra 1776035 1776130 -27228526 + Gypsy4_I LTR Gypsy 4926 5005 -1283 7 598 9749 6 36 1 chrUextra 1776230 1777319 -27227337 - GTWIN_I LTR Gypsy -1248 5173 4047 7 598 9737 6 11 0 chrUextra 1777419 1778508 -27226148 + DOC LINE Jockey 780 1880 -2845 7 598 4526 30 0 2 chrUextra 1778608 1779140 -27225516 + HETA LINE telomeric 5551 6081 0 7 598 5130 4 0 0 chrUextra 1779143 1779697 -27224959 + TART LINE telomeric 11291 11844 -2633 7 598 3130 144 15 22 chrUextra 1779797 1780414 -27224242 + TAHRE LINE telomeric 9915 10663 -3814 7 598 1392 207 45 39 chrUextra 1780408 1780841 -27223815 + TAHRE LINE telomeric 6944 7304 -3159 7 598 3277 3 0 0 chrUextra 1780986 1781340 -27223316 + QUASIMODO_LTR LTR Gypsy 305 658 0 7 598 300 53 0 0 chrUextra 1781340 1781378 -27223278 + (TA)n Simple_repeat Simple_repeat 1 38 0 7 598 195 42 0 0 chrUextra 1781414 1781438 -27223218 + (TA)n Simple_repeat Simple_repeat 2 25 0 7 598 26 30 0 0 chrUextra 1781752 1781785 -27222871 + AT_rich Low_complexity Low_complexity 1 33 0 7 598 9095 22 34 12 chrUextra 1782175 1783264 -27221392 - R1_DM LINE R1 -1642 3714 2602 7 598 9161 9 2 29 chrUextra 1783364 1784452 -27220204 - QUASIMODO_I LTR Gypsy -3360 2700 1643 7 598 5251 0 0 0 chrUextra 1784552 1785125 -27219531 + FW_DM LINE Jockey 4119 4691 -1 7 598 916 99 91 7 chrUextra 1785124 1785259 -27219397 - Invader1_I LTR Gypsy -1141 2045 1899 7 598 2939 50 79 0 chrUextra 1785259 1785639 -27219017 + PROTOP DNA P 1 410 -4070 7 598 5657 137 30 4 chrUextra 1785740 1786818 -27217838 + BATUMI_I LTR Pao 3629 4802 -3112 7 598 983 333 20 21 chrUextra 1786991 1787579 -27217077 - MICROPIA_I LTR Gypsy -3389 710 127 7 598 1184 105 41 0 chrUextra 1787588 1787760 -27216896 - IDEFIX_I LTR Gypsy -3784 1844 1666 7 598 2734 63 0 79 chrUextra 1788116 1788532 -27216124 + Gypsy8_I LTR Gypsy 1346 1728 -2619 7 598 667 84 7 51 chrUextra 1788516 1788654 -27216002 - DMSAT6 Satellite Satellite -71 399 268 7 598 3871 31 0 0 chrUextra 1788755 1789204 -27215452 + DMCR1A LINE CR1 2096 2544 -1926 7 598 3540 68 90 16 chrUextra 1789304 1789813 -27214843 + DMCR1A LINE CR1 1649 2195 -2275 7 598 2161 95 36 7 chrUextra 1789809 1790115 -27214541 + BS2 LINE Jockey 198 512 -4209 7 598 2002 92 7 0 chrUextra 1790110 1790391 -27214265 + BS2 LINE Jockey 1373 1655 -3066 7 598 4590 94 88 9 chrUextra 1790491 1791578 -27213078 + Gypsy12_I LTR Gypsy 1078 2250 -3296 7 598 3599 80 75 16 chrUextra 1791679 1792187 -27212469 - Gypsy12_I LTR Gypsy -614 4932 4395 7 598 813 143 4 42 chrUextra 1792171 1792355 -27212301 - Gypsy12_I LTR Gypsy -4853 693 459 7 598 1968 97 15 52 chrUextra 1792368 1792694 -27211962 - Gypsy12_I LTR Gypsy -5206 340 27 7 598 386 204 40 20 chrUextra 1792664 1792764 -27211892 - Gypsy12_LTR LTR Gypsy -1938 398 297 7 598 263 0 0 0 chrUextra 1792865 1792894 -27211762 - BARI_DM DNA Tc1 -1696 32 4 7 598 9478 1 40 0 chrUextra 1792894 1793952 -27210704 - BARI_DM DNA Tc1 -1 1727 628 7 598 7572 77 9 4 chrUextra 1794069 1795139 -27209517 + R1_DM LINE R1 1403 3517 -1839 7 598 8181 9 94 21 chrUextra 1795239 1796248 -27208408 - QUASIMODO_I LTR Gypsy -4977 1083 1 7 598 696 0 0 0 chrUextra 1796248 1796326 -27208330 - QUASIMODO_LTR LTR Gypsy 0 658 581 7 598 837 309 33 28 chrUextra 1796431 1796847 -27207809 + Copia2_I LTR Copia 1652 2116 -2477 7 598 28 0 0 0 chrUextra 1796908 1796936 -27207720 + AT_rich Low_complexity Low_complexity 1 28 0 7 598 277 340 48 19 chrUextra 1797302 1797512 -27207144 + Copia2_I LTR Copia 2452 2667 -1495 7 598 2183 8 4 0 chrUextra 1797612 1797858 -27206798 + R1_DM LINE R1 4036 4282 -1074 7 598 5220 30 54 0 chrUextra 1797878 1798504 -27206152 + R1_DM LINE R1 4407 5066 -290 7 598 1022 26 0 0 chrUextra 1798501 1798615 -27206041 + R1_DM LINE R1 5243 5356 0 7 598 406 40 0 0 chrUextra 1798648 1798698 -27205958 + R1_DM LINE R1 1 50 -5306 7 598 3155 9 0 0 chrUextra 1799025 1799369 -27205287 - BS LINE Jockey -1 5125 4782 7 598 3830 14 0 2 chrUextra 1799453 1799884 -27204772 + Gypsy4_I LTR Gypsy 374 803 -5485 7 598 9648 14 36 1 chrUextra 1799984 1801070 -27203586 + R2_DM LINE R2 605 1728 -1879 7 598 4612 18 0 0 chrUextra 1801170 1801679 -27202977 + DIVER_I LTR Pao 798 1306 -4337 7 598 5036 31 0 0 chrUextra 1801680 1802256 -27202400 + DIVER_I LTR Pao 1498 2073 -3570 7 598 9811 8 12 0 chrUextra 1802356 1803441 -27201215 + STALKER4_I LTR Gypsy 3644 4741 -1789 7 598 390 310 38 38 chrUextra 1804281 1804521 -27200135 + Gypsy4_I LTR Gypsy 1179 1367 -4810 7 598 526 195 0 9 chrUextra 1804726 1804840 -27199816 + XDMR_DM Unknown Unknown 248 360 0 7 598 4029 192 30 31 chrUextra 1804755 1805809 -27198847 - SAR_DM Satellite Satellite -353 1119 67 7 598 8943 13 9 45 chrUextra 1805912 1806996 -27197660 + Gypsy2_I LTR Gypsy 3284 4328 -1807 7 598 9037 15 21 23 chrUextra 1807096 1808181 -27196475 + LSU-rRNA_Dme rRNA rRNA 117 1199 -2701 7 598 4696 16 0 0 chrUextra 1808281 1808794 -27195862 - SSU-rRNA_Dme rRNA rRNA -1464 531 19 7 598 23 78 0 0 chrUextra 1808860 1808911 -27195745 + AT_rich Low_complexity Low_complexity 1 51 0 7 598 32 0 0 0 chrUextra 1808920 1808952 -27195704 + AT_rich Low_complexity Low_complexity 1 32 0 7 598 26 93 0 0 chrUextra 1809045 1809120 -27195536 + AT_rich Low_complexity Low_complexity 1 75 0 7 598 1778 56 0 9 chrUextra 1809466 1809699 -27194957 + DM297_I LTR Gypsy 4121 4351 -1816 7 598 2397 62 22 9 chrUextra 1809703 1810026 -27194630 + MDG1_I LTR Gypsy 5401 5727 -869 7 598 1791 56 0 0 chrUextra 1810028 1810277 -27194379 + MDG1_I LTR Gypsy 5956 6204 -392 7 598 627 90 54 185 chrUextra 1810253 1810513 -27194143 + MDG1_I LTR Gypsy 6371 6596 0 7 598 308 0 0 0 chrUextra 1810651 1810688 -27193968 - Copia2_LTR_DM LTR Copia -133 65 29 7 598 3885 5 5 0 chrUextra 1810688 1811109 -27193547 - Invader1_LTR LTR Gypsy 0 423 1 7 598 3837 15 37 63 chrUextra 1811117 1811606 -27193050 - MICROPIA_LTR LTR Gypsy 0 476 1 7 598 824 29 0 0 chrUextra 1811634 1811736 -27192920 - Copia2_I LTR Copia 0 4162 4061 7 598 2333 187 34 14 chrUextra 1811836 1812401 -27192255 - SAR_DM Satellite Satellite -692 780 205 7 598 352 216 29 10 chrUextra 1812317 1812420 -27192236 + ARS406_DM Unknown Unknown 1 105 -248 7 598 2100 190 17 8 chrUextra 1812445 1812918 -27191738 - SAR_DM Satellite Satellite -411 1061 585 7 598 9272 19 0 0 chrUextra 1813020 1814104 -27190552 - ZAM_I LTR Gypsy -1670 5820 4737 7 598 366 282 30 8 chrUextra 1814280 1814412 -27190244 + Invader4_I LTR Gypsy 1 135 -2278 7 598 406 327 47 71 chrUextra 1814464 1815074 -27189582 + Invader6_I LTR Gypsy 888 1477 -2999 7 598 616 318 5 0 chrUextra 1815073 1815287 -27189369 + Invader6_I LTR Gypsy 1726 1940 -2159 7 598 9478 8 52 2 chrUextra 1815388 1816472 -27188184 - G_DM LINE Jockey -878 3468 2331 7 598 6169 33 9 0 chrUextra 1816572 1817337 -27187319 + Invader2_I LTR Gypsy 2800 3571 -1021 7 598 2676 31 6 0 chrUextra 1817335 1817656 -27187000 + Invader2_I LTR Gypsy 3763 4085 -507 7 598 776 172 7 0 chrUextra 1817756 1817901 -27186755 - ARS406_DM Unknown Unknown -207 146 1 7 598 4292 187 34 29 chrUextra 1817793 1818838 -27185818 + SAR_DM Satellite Satellite 180 1230 -242 7 598 2494 103 29 52 chrUextra 1818958 1819439 -27185217 + DMSAT6 Satellite Satellite 1 470 0 7 598 2577 91 22 29 chrUextra 1819466 1820023 -27184633 + DMSAT6 Satellite Satellite 1 553 0 7 598 3949 30 93 0 chrUextra 1820715 1821208 -27183448 + PROTOP DNA P 1 539 -3941 7 598 702 36 12 0 chrUextra 1821308 1821392 -27183264 + R1_DM LINE R1 5272 5356 0 7 598 7877 51 3 5 chrUextra 1821413 1822392 -27182264 + R1_DM LINE R1 23 999 -4357 7 598 6135 25 14 0 chrUextra 1822492 1823203 -27181453 + R1_DM LINE R1 1632 2352 -3004 7 598 3146 39 16 0 chrUextra 1823191 1823575 -27181081 + R1_DM LINE R1 2635 3024 -2332 7 598 4407 0 2 0 chrUextra 1823675 1824153 -27180503 + IVK_DM LINE I 4924 5402 0 7 598 1533 40 0 0 chrUextra 1824153 1824511 -27180145 + (TTA)n Simple_repeat Simple_repeat 1 358 0 7 598 1076 81 0 9 chrUextra 1824527 1824755 -27179901 + (TTA)n Simple_repeat Simple_repeat 1 225 0 7 598 6378 163 24 0 chrUextra 1824858 1825941 -27178715 + Gypsy5_I LTR Gypsy 1869 2977 -3532 7 598 2370 41 105 0 chrUextra 1826041 1826356 -27178300 - BS3_DM LINE Jockey -673 1117 770 7 598 833 209 30 80 chrUextra 1826386 1826688 -27177968 - Gypsy12A_LTR LTR Gypsy -1169 1111 825 7 598 3146 34 104 31 chrUextra 1826700 1827124 -27177532 - Baggins1 LINE LOA -5 5448 4994 7 598 479 324 12 21 chrUextra 1827224 1827467 -27177189 + Gypsy4_I LTR Gypsy 3233 3473 -2815 7 598 267 234 71 47 chrUextra 1828041 1828126 -27176530 + Gypsy6_I LTR Gypsy 4628 4714 -2298 7 598 4580 0 0 2 chrUextra 1828407 1828917 -27175739 + DOC LINE Jockey 4217 4725 0 7 598 4872 21 73 0 chrUextra 1828917 1829490 -27175166 - R1_DM LINE R1 -1620 3736 3122 7 598 2731 201 85 54 chrUextra 1829592 1830652 -27174004 + TART LINE telomeric 6050 6653 -7824 7 598 249 209 70 0 chrUextra 1830773 1830859 -27173797 + R1_DM LINE R1 619 710 -4646 7 598 7333 93 3 7 chrUextra 1830856 1831853 -27172803 + R1_DM LINE R1 1108 2100 -3256 7 598 4382 187 13 25 chrUextra 1831953 1833033 -27171623 + SAR_DM Satellite Satellite 1 1067 -221 7 598 2713 119 75 39 chrUextra 1833147 1833705 -27170951 + STALKER4_I LTR Gypsy 597 1174 -5356 7 598 3072 3 0 0 chrUextra 1833705 1834035 -27170621 + TRANSPAC_LTR LTR Gypsy 1 330 0 7 598 1572 22 6 0 chrUextra 1834035 1834215 -27170441 + TRANSPAC_I LTR Gypsy 1 181 -4409 7 598 3894 9 0 0 chrUextra 1834315 1834751 -27169905 + FW_DM LINE Jockey 4255 4690 -2 7 74 6010 5 0 0 chrUextra 1834750 1835395 -27169261 - Invader1_I LTR Gypsy -993 2193 1549 7 599 3985 81 46 10 chrUextra 1835495 1836081 -27168575 - IDEFIX_I LTR Gypsy -1141 4487 3881 7 599 814 114 0 0 chrUextra 1836077 1836200 -27168456 - IDEFIX_I LTR Gypsy -1852 3776 3654 7 599 940 172 71 81 chrUextra 1836222 1836544 -27168112 - Gypsy_LTR LTR Gypsy -21 461 143 7 599 251 0 0 0 chrUextra 1836545 1836575 -27168081 - PROTOP_B DNA P 0 1153 1124 7 599 5315 15 2 2 chrUextra 1836675 1837276 -27167380 + R1_DM LINE R1 3708 4308 -1048 7 599 3616 65 7 4 chrUextra 1837290 1837755 -27166901 + R1_DM LINE R1 1 466 -4890 7 599 3694 211 35 16 chrUextra 1837860 1838891 -27165765 + SAR_DM Satellite Satellite 218 1267 -205 7 599 818 153 0 7 chrUextra 1838790 1838935 -27165721 - ARS406_DM Unknown Unknown -164 189 46 7 599 254 0 0 0 chrUextra 1839035 1839063 -27165593 + GTWIN_LTR LTR Gypsy 468 495 0 7 599 9917 0 0 0 chrUextra 1839063 1840115 -27164541 + GTWIN_I LTR Gypsy 1 1052 -5369 7 599 9380 7 26 0 chrUextra 1840215 1841284 -27163372 - STALKER4_I LTR Gypsy -841 5689 4593 7 599 3962 189 27 26 chrUextra 1841397 1842465 -27162191 + SAR_DM Satellite Satellite 1 1069 -203 7 599 432 75 0 0 chrUextra 1842575 1842642 -27162014 - MDG1_I LTR Gypsy -5396 1200 1134 7 599 6876 68 28 8 chrUextra 1842708 1843654 -27161002 - MDG1_I LTR Gypsy -5452 1144 181 7 599 844 263 189 19 chrUextra 1844452 1844828 -27159828 + Invader3_I LTR Gypsy 198 637 -4251 7 599 4586 42 42 4 chrUextra 1844935 1846012 -27158644 - IDEFIX_I LTR Gypsy -1090 4538 3421 7 599 2552 118 22 23 chrUextra 1846114 1847193 -27157463 - DMSAT6 Satellite Satellite -45 1078 1 7 599 5182 0 0 0 chrUextra 1847293 1847849 -27156807 - BEL_I LTR Pao -3151 2253 1698 7 599 3799 5 0 0 chrUextra 1847849 1848266 -27156390 + TIRANT_LTR LTR Gypsy 1 417 0 7 599 981 0 0 0 chrUextra 1848266 1848372 -27156284 + TIRANT_I LTR Gypsy 1 106 -7586 7 599 4207 4 0 2 chrUextra 1848472 1848934 -27155722 - FW_DM LINE Jockey -4226 466 6 7 599 28 48 0 0 chrUextra 1849217 1849259 -27155397 + AT_rich Low_complexity Low_complexity 1 42 0 7 599 2677 89 17 26 chrUextra 1849667 1850730 -27153926 - DMSAT6 Satellite Satellite 0 1053 1 7 599 3726 98 22 6 chrUextra 1850856 1851397 -27153259 - TART LINE telomeric -7194 7283 6734 7 599 368 283 127 62 chrUextra 1851425 1851736 -27152920 - TART LINE telomeric -1448 9206 8899 7 599 926 171 94 0 chrUextra 1851739 1851909 -27152747 - TART LINE telomeric -10533 3944 3759 7 599 2839 199 73 65 chrUextra 1852009 1852894 -27151762 + Gypsy12_LTR LTR Gypsy 696 1597 -683 7 599 207 0 0 0 chrUextra 1852894 1852917 -27151739 + (TAA)n Simple_repeat Simple_repeat 3 25 0 7 599 480 206 144 65 chrUextra 1852917 1853003 -27151653 + Gypsy12_LTR LTR Gypsy 1598 1678 -602 7 599 648 65 11 0 chrUextra 1852996 1853088 -27151568 - IVK_DM LINE I -2 5400 5308 7 599 10071 1 0 0 chrUextra 1853188 1854267 -27150389 + TART LINE telomeric 5743 6821 -7656 7 599 9141 28 32 1 chrUextra 1854367 1855446 -27149210 - R1_DM LINE R1 -1413 3943 2831 7 599 9395 13 32 0 chrUextra 1855548 1856625 -27148031 + Gypsy4_I LTR Gypsy 3950 5060 -1228 7 599 5302 2 38 0 chrUextra 1856725 1857804 -27146852 + DM176_I LTR Gypsy 3203 4322 -2098 7 599 2561 111 43 17 chrUextra 1859083 1860160 -27144496 + DMSAT6 Satellite Satellite 1 1105 -29 7 599 7362 62 105 24 chrUextra 1860262 1861341 -27143315 - Gypsy7_I LTR Gypsy -2301 2683 1518 7 599 686 152 88 0 chrUextra 1861477 1861602 -27143054 + Gypsy12A_LTR LTR Gypsy 2127 2262 -18 7 599 1009 226 223 55 chrUextra 1861609 1862031 -27142625 + TAHRE LINE telomeric 9807 10299 -164 7 599 330 101 102 6 chrUextra 1862083 1862155 -27142501 + TART LINE telomeric 10421 10491 -3986 7 599 1611 36 10 0 chrUextra 1862325 1862519 -27142137 + PROTOP_B DNA P 1 196 -957 7 599 9534 21 1 1 chrUextra 1862619 1863697 -27140959 - R1_DM LINE R1 -707 4649 3572 7 599 3386 16 0 0 chrUextra 1863797 1864173 -27140483 + R1_DM LINE R1 4981 5356 0 7 599 4251 57 130 3 chrUextra 1864206 1864875 -27139781 + R1_DM LINE R1 1 754 -4602 7 599 9440 23 1 0 chrUextra 1864975 1866053 -27138603 + FW_DM LINE Jockey 2227 3305 -1387 7 599 5252 19 45 3 chrUextra 1866153 1867231 -27137425 - G5_DM LINE Jockey -817 4039 2916 7 599 4378 6 0 0 chrUextra 1867331 1867821 -27136835 + QUASIMODO_I LTR Gypsy 2458 2947 -3113 7 599 2872 36 137 16 chrUextra 1867818 1868278 -27136378 + TRANSIB3 DNA Transib 791 1306 -1577 7 599 576 15 0 0 chrUextra 1868287 1868355 -27136301 + TRANSIB3 DNA Transib 2392 2459 -424 7 599 264 95 0 0 chrUextra 1868367 1868409 -27136247 + TRANSIB3 DNA Transib 2624 2665 -218 7 599 730 47 0 0 chrUextra 1868509 1868595 -27136061 + DMCR1A LINE CR1 1285 1370 -3100 7 599 5868 88 14 28 chrUextra 1868623 1869587 -27135069 - I_DM LINE I -4035 2196 1247 7 599 1013 87 9 20 chrUextra 1869695 1870745 -27133911 - RSP Satellite Satellite 0 1038 1 7 599 2047 0 0 0 chrUextra 1870865 1871087 -27133569 - ROO_I LTR Pao -8034 222 1 7 599 3979 5 0 0 chrUextra 1871087 1871515 -27133141 - ROO_LTR LTR Pao 0 428 1 7 599 719 12 0 35 chrUextra 1871515 1871601 -27133055 - NTS_DM Other Other -133 107 25 7 599 1302 18 0 12 chrUextra 1871653 1871819 -27132837 - NTS_DM Other Other -39 201 38 7 599 928 9 0 27 chrUextra 1871819 1871931 -27132725 - NTS_DM Other Other -107 133 25 7 599 2546 114 43 16 chrUextra 1872043 1873119 -27131537 + DMSAT6 Satellite Satellite 1 1105 -6 7 599 928 9 0 27 chrUextra 1873222 1873334 -27131322 - NTS_DM Other Other -107 133 25 7 599 1332 18 0 6 chrUextra 1873386 1873551 -27131105 - NTS_DM Other Other -39 201 38 7 599 928 9 0 27 chrUextra 1873551 1873663 -27130993 - NTS_DM Other Other -107 133 25 7 599 22 56 0 0 chrUextra 1873689 1873725 -27130931 + AT_rich Low_complexity Low_complexity 1 36 0 7 599 2957 6 0 0 chrUextra 1873734 1874055 -27130601 - MAX_LTR LTR Pao 0 321 1 7 599 2241 0 0 0 chrUextra 1874055 1874298 -27130358 - MAX_I LTR Pao 0 7914 7672 7 599 25 0 0 0 chrUextra 1874492 1874517 -27130139 + AT_rich Low_complexity Low_complexity 1 25 0 7 599 4912 29 7 3 chrUextra 1874695 1875287 -27129369 - IDEFIX_LTR LTR Gypsy 0 594 1 7 599 677 109 49 38 chrUextra 1875287 1875475 -27129181 + Invader2_I LTR Gypsy 3419 3679 -913 7 599 9733 2 0 0 chrUextra 1875575 1876652 -27128004 + ROVER-I_DM LTR Gypsy 2458 3534 -3050 7 599 4524 2 0 0 chrUextra 1876752 1877232 -27127424 + SSU-rRNA_Dme rRNA rRNA 224 703 -1292 7 599 2474 8 0 0 chrUextra 1877232 1877498 -27127158 - DMLTR5 LTR Gypsy 0 266 1 7 599 3023 0 0 0 chrUextra 1877498 1877829 -27126827 - HMSBEAGLE_I LTR Gypsy 0 6529 6199 7 599 9825 0 1 0 chrUextra 1877929 1879005 -27125651 - Gypsy5_I LTR Gypsy -4693 1816 740 7 599 1336 206 131 126 chrUextra 1879306 1879862 -27124794 + HMSBEAGLE_I LTR Gypsy 5810 6368 -161 7 599 297 152 42 70 chrUextra 1880096 1880167 -27124489 + HMSBEAGLE_I LTR Gypsy 6334 6402 -127 7 599 4341 15 27 0 chrUextra 1880281 1880807 -27123849 + Invader2_I LTR Gypsy 84 623 -3969 7 599 5092 0 0 0 chrUextra 1880807 1881357 -27123299 - ACCORD_LTR LTR Gypsy 0 558 9 7 599 5349 22 23 3 chrUextra 1881457 1882533 -27122123 - STALKER4_I LTR Gypsy -2158 4372 3222 7 599 9219 23 2 0 chrUextra 1882633 1883709 -27120947 + ACCORD2_I LTR Gypsy 3325 4402 -2810 7 599 3264 29 146 0 chrUextra 1883809 1884356 -27120300 + R1_DM LINE R1 4440 5066 -290 7 599 1002 35 0 0 chrUextra 1884353 1884467 -27120189 + R1_DM LINE R1 5243 5356 0 7 599 2919 73 5 5 chrUextra 1884500 1884885 -27119771 + R1_DM LINE R1 1 385 -4971 7 599 3240 32 5 0 chrUextra 1885039 1885416 -27119240 - STALKER4_LTR LTR Gypsy -23 379 1 7 599 5755 23 0 0 chrUextra 1885416 1886061 -27118595 - DIVER_I LTR Pao -2347 3296 2652 7 599 2570 26 3 3 chrUextra 1886161 1886475 -27118181 + IDEFIX_LTR LTR Gypsy 281 594 0 7 599 25 0 0 0 chrUextra 1886645 1886670 -27117986 + AT_rich Low_complexity Low_complexity 1 25 0 7 599 1946 26 4 0 chrUextra 1887007 1887235 -27117421 + IDEFIX_I LTR Gypsy 1 229 -5399 7 599 3133 104 18 62 chrUextra 1887337 1887890 -27116766 + TART LINE telomeric 2834 3362 -11115 7 599 2319 149 12 77 chrUextra 1887884 1888413 -27116243 + TART LINE telomeric 3682 4029 -10448 7 599 238 91 22 22 chrUextra 1888513 1888558 -27116098 + PROTOP DNA P 3430 3474 -1006 7 599 795 103 145 6 chrUextra 1888596 1888762 -27115894 + PROTOP DNA P 3726 3914 -566 7 599 1016 133 139 2 chrUextra 1888770 1889165 -27115491 - DNAREP1_DM LINE Penelope -262 332 3 7 599 21 0 0 0 chrUextra 1889537 1889558 -27115098 + AT_rich Low_complexity Low_complexity 1 21 0 7 599 987 0 8 0 chrUextra 1889689 1889809 -27114847 + MAX_I LTR Pao 7794 7914 0 7 599 2731 12 0 0 chrUextra 1889809 1890130 -27114526 + MAX_LTR LTR Pao 1 321 0 7 599 4540 25 5 41 chrUextra 1890130 1890765 -27113891 + DOC2_DM LINE Jockey 746 1357 -3436 7 599 1080 7 0 81 chrUextra 1890865 1891013 -27113643 - ROO_I LTR Pao -8120 136 1 7 599 3766 0 0 0 chrUextra 1891013 1891441 -27113215 - ROO_LTR LTR Pao 0 428 1 7 599 1658 26 4 61 chrUextra 1891441 1891684 -27112972 + ALUII_DM Unknown Unknown 12 240 0 7 599 25 0 0 0 chrUextra 1892144 1892169 -27112487 + AT_rich Low_complexity Low_complexity 1 25 0 7 599 4811 36 17 0 chrUextra 1892485 1893116 -27111540 + IDEFIX_I LTR Gypsy 1 642 -4986 7 599 1593 167 19 92 chrUextra 1893243 1893666 -27110990 - Gypsy3_LTR LTR Gypsy -6 392 1 7 599 3814 22 24 138 chrUextra 1893666 1894291 -27110365 + CIRCE LINE Composite 5256 5809 -547 7 599 2302 100 22 25 chrUextra 1894392 1895466 -27109190 + DMSAT6 Satellite Satellite 1 1070 0 7 599 6780 80 19 3 chrUextra 1895566 1896591 -27108065 + IDEFIX_I LTR Gypsy 2877 3917 -1711 7 599 384 89 0 0 chrUextra 1896585 1896641 -27108015 + IDEFIX_I LTR Gypsy 4192 4247 -1381 7 599 4098 6 2 0 chrUextra 1896741 1897219 -27107437 + QUASIMODO_LTR LTR Gypsy 180 658 0 7 599 992 149 196 20 chrUextra 1897219 1897560 -27107096 - DNAREP1_DM LINE Penelope -104 490 90 7 599 1034 116 60 5 chrUextra 1897564 1897764 -27106892 - DNAREP1_DM LINE Penelope -262 332 122 7 599 245 152 0 21 chrUextra 1897769 1897816 -27106840 - Gypsy3_I LTR Gypsy -2236 3941 3901 7 599 7062 49 34 19 chrUextra 1897916 1898991 -27105665 + STALKER4_I LTR Gypsy 877 1967 -4563 7 599 4899 55 10 6 chrUextra 1899091 1899772 -27104884 - MDG1_I LTR Gypsy -512 6084 5401 7 599 2709 57 31 5 chrUextra 1899777 1900166 -27104490 - DM297_I LTR Gypsy -1816 4351 3953 7 599 390 153 0 0 chrUextra 1900267 1900339 -27104317 + ARS406_DM Unknown Unknown 45 116 -237 7 599 1115 178 26 9 chrUextra 1900340 1901100 -27103556 - SAR_DM Satellite Satellite -683 772 1 7 599 898 183 26 9 chrUextra 1901111 1901337 -27103319 - SAR_DM Satellite Satellite -683 789 560 7 599 2400 99 8 40 chrUextra 1901445 1902514 -27102142 - DMSAT6 Satellite Satellite -52 1035 1 7 599 1848 12 0 40 chrUextra 1902977 1903227 -27101429 - ALUII_DM Unknown Unknown 0 240 1 7 599 21 57 0 0 chrUextra 1903227 1903262 -27101394 + AT_rich Low_complexity Low_complexity 1 35 0 7 599 22 35 0 0 chrUextra 1903459 1903488 -27101168 + AT_rich Low_complexity Low_complexity 1 29 0 7 599 37 39 0 0 chrUextra 1903589 1903640 -27101016 + AT_rich Low_complexity Low_complexity 1 51 0 7 599 3805 78 69 0 chrUextra 1903788 1904371 -27100285 + Gypsy10_I LTR Gypsy 1196 1818 -3460 7 599 21 0 0 0 chrUextra 1904827 1904848 -27099808 + AT_rich Low_complexity Low_complexity 1 21 0 7 599 1501 353 15 11 chrUextra 1905036 1906024 -27098632 + Copia2_I LTR Copia 2592 3583 -579 7 599 2759 137 29 44 chrUextra 1906160 1906708 -27097948 + Gypsy12_LTR LTR Gypsy 1774 2313 -23 7 599 822 234 259 21 chrUextra 1906720 1907099 -27097557 + TAHRE LINE telomeric 9807 10275 -188 7 599 4013 57 147 15 chrUextra 1907310 1907985 -27096671 - TART LINE telomeric -11349 3128 2365 7 599 2135 119 124 2 chrUextra 1907980 1908383 -27096273 - TART LINE telomeric -13132 1345 894 7 599 3470 45 0 7 chrUextra 1908484 1908930 -27095726 - FW_DM LINE Jockey -4248 444 2 7 599 5170 33 17 0 chrUextra 1908914 1909556 -27095100 + R1_DM LINE R1 1376 2028 -3328 7 599 1841 74 111 25 chrUextra 1909656 1910186 -27094470 - DM297_I LTR Gypsy -382 5785 5210 7 599 4804 0 2 0 chrUextra 1910829 1911412 -27093244 - DM297_I LTR Gypsy -473 5694 5111 7 599 4227 4 0 0 chrUextra 1911399 1911902 -27092754 - DM297_I LTR Gypsy -1880 4287 3785 7 599 497 177 16 16 chrUextra 1912002 1912128 -27092528 - ARS406_DM Unknown Unknown -226 127 2 7 599 3202 224 31 13 chrUextra 1912026 1913053 -27091603 + SAR_DM Satellite Satellite 185 1230 -242 7 599 456 148 0 0 chrUextra 1912992 1913073 -27091583 - ARS406_DM Unknown Unknown -166 187 107 7 599 2582 82 22 19 chrUextra 1913175 1914248 -27090408 - DMSAT6 Satellite Satellite 0 1076 1 7 599 9044 7 1 0 chrUextra 1914348 1915421 -27089235 + HETA LINE telomeric 2386 3459 -2622 7 599 2243 31 0 24 chrUextra 1915521 1915817 -27088839 + G5_DM LINE Jockey 4568 4856 0 7 599 819 75 0 18 chrUextra 1915821 1916594 -27088062 - RSP Satellite Satellite -13 759 1 7 599 2789 188 17 11 chrUextra 1916694 1917406 -27087250 - Jockey2 LINE Jockey -1609 1819 1419 7 599 706 148 30 61 chrUextra 1917576 1917741 -27086915 - Gypsy5_LTR LTR Gypsy -194 236 77 7 599 229 125 0 24 chrUextra 1918422 1918463 -27086193 - HMSBEAGLE_I LTR Gypsy -6308 221 182 7 599 262 106 0 21 chrUextra 1918594 1918642 -27086014 - HMSBEAGLE_I LTR Gypsy -6308 221 175 7 599 336 66 65 16 chrUextra 1918664 1918726 -27085930 - HMSBEAGLE_I LTR Gypsy -6464 65 1 7 599 867 176 104 15 chrUextra 1918725 1918927 -27085729 - DMLTR5 LTR Gypsy 0 266 47 7 599 3398 5 5 7 chrUextra 1919038 1919473 -27085183 - STALKER4_I LTR Gypsy -4889 1641 1208 7 599 2445 17 3 0 chrUextra 1919473 1919770 -27084886 - Invader3_LTR LTR Gypsy 0 298 1 7 599 945 0 0 0 chrUextra 1919770 1919881 -27084775 - Invader3_I LTR Gypsy 0 4888 4778 7 599 227 31 31 0 chrUextra 1919881 1919913 -27084743 + (TTA)n Simple_repeat Simple_repeat 1 33 0 7 599 1643 0 0 5 chrUextra 1919913 1920110 -27084546 - Invader3_I LTR Gypsy -144 4744 4549 7 599 272 207 23 0 chrUextra 1920247 1920326 -27084330 + PROTOP_A DNA P 43 124 -981 7 599 21 0 0 0 chrUextra 1920421 1920442 -27084214 + AT_rich Low_complexity Low_complexity 1 21 0 7 599 579 99 0 112 chrUextra 1920527 1920652 -27084004 - DNAREP1_DM LINE Penelope -9 585 475 7 599 848 117 0 135 chrUextra 1921713 1921920 -27082736 - DIVER_LTR LTR Pao 0 224 46 7 599 4476 17 0 2 chrUextra 1921919 1922454 -27082202 - DIVER_I LTR Pao -2331 3312 2779 7 599 4456 91 9 39 chrUextra 1922558 1923626 -27081030 + HETA LINE telomeric 5524 6081 0 7 599 272 95 0 0 chrUextra 1923726 1923768 -27080888 - SAR_DM Satellite Satellite -1032 440 399 7 599 3341 186 33 13 chrUextra 1923785 1924798 -27079858 - SAR_DM Satellite Satellite -441 1032 1 7 599 359 138 92 0 chrUextra 1925776 1925841 -27078815 - G3_DM LINE Jockey -4026 579 509 7 599 2499 3 0 0 chrUextra 1926070 1926362 -27078294 + BLASTOPIA_I LTR Gypsy 4190 4481 0 7 599 2084 19 7 11 chrUextra 1926362 1926634 -27078022 + BLASTOPIA_LTR LTR Gypsy 1 271 -4 7 599 188 67 33 0 chrUextra 1926634 1926664 -27077992 + (TA)n Simple_repeat Simple_repeat 2 32 0 7 599 3508 27 0 0 chrUextra 1926680 1927122 -27077534 - MDG1_LTR LTR Gypsy 0 442 1 7 599 2173 68 0 37 chrUextra 1927242 1927565 -27077091 + CIRCE LINE Composite 2479 2789 -3567 7 599 829 76 0 0 chrUextra 1927581 1927699 -27076957 + CIRCE LINE Composite 4863 4980 -1376 7 599 378 40 0 0 chrUextra 1927887 1927937 -27076719 + G4_DM LINE Jockey 3749 3798 -58 7 599 8781 21 1 1 chrUextra 1928413 1929484 -27075172 - R1_DM LINE R1 -1469 3887 2817 7 599 2237 306 23 28 chrUextra 1929605 1930655 -27074001 - MICROPIA_I LTR Gypsy -1166 3310 2266 7 599 422 54 18 0 chrUextra 1930755 1930811 -27073845 - R1_DM LINE R1 -3983 1373 1317 7 599 8108 34 1 1 chrUextra 1930809 1931826 -27072830 - R1_DM LINE R1 -3528 1828 812 7 599 3292 7 12 12 chrUextra 1931926 1932335 -27072321 + DM1731_I LTR Copia 3568 3976 0 7 599 2730 30 0 0 chrUextra 1932335 1932671 -27071985 + DM1731_LTR LTR Copia 1 336 0 7 599 2082 16 4 0 chrUextra 1933097 1933348 -27071308 + LSU-rRNA_Dme rRNA rRNA 2330 2581 -1319 7 599 6968 10 5 2 chrUextra 1933346 1934168 -27070488 + R2_DM LINE R2 3 826 -2781 7 599 21 36 0 0 chrUextra 1934436 1934464 -27070192 + AT_rich Low_complexity Low_complexity 1 28 0 7 599 53 17 0 0 chrUextra 1934639 1934699 -27069957 + AT_rich Low_complexity Low_complexity 1 60 0 7 599 231 175 16 16 chrUextra 1935182 1935246 -27069410 + (TTA)n Simple_repeat Simple_repeat 2 65 0 7 599 220 141 46 15 chrUextra 1935475 1935540 -27069116 + (TTA)n Simple_repeat Simple_repeat 2 68 0 7 599 51 31 0 0 chrUextra 1936052 1936117 -27068539 + AT_rich Low_complexity Low_complexity 1 65 0 7 599 22 35 0 0 chrUextra 1936445 1936474 -27068182 + AT_rich Low_complexity Low_complexity 1 29 0 7 599 3552 192 30 26 chrUextra 1936611 1937670 -27066986 - SAR_DM Satellite Satellite -445 1063 1 7 599 3235 55 0 0 chrUextra 1937779 1938248 -27066408 + ZAM_I LTR Gypsy 6386 6854 -636 7 599 2239 52 10 0 chrUextra 1938247 1938555 -27066101 + ZAM_I LTR Gypsy 7176 7486 -4 7 599 525 68 0 0 chrUextra 1938573 1938647 -27066009 + ZAM_LTR LTR Gypsy 1 74 -398 7 599 513 47 0 0 chrUextra 1938649 1938713 -27065943 - DIVER2_I LTR Pao -1459 2688 2625 7 599 1061 47 113 0 chrUextra 1938699 1938849 -27065807 - DIVER2_I LTR Pao -3071 1076 910 7 599 3412 162 28 16 chrUextra 1938949 1940019 -27064637 + Gypsy10_I LTR Gypsy 3676 5287 -1001 7 599 8816 21 9 0 chrUextra 1940119 1941189 -27063467 + DMRT1A LINE R1 3543 4622 -561 7 599 4920 47 23 5 chrUextra 1941289 1941937 -27062719 - TART LINE telomeric -4034 10443 9784 7 599 2118 32 42 24 chrUextra 1941932 1942219 -27062437 - PROTOP_A DNA P -813 292 1 7 599 983 50 0 0 chrUextra 1942219 1942359 -27062297 - TART_B1 LINE telomeric -4967 5687 5548 7 599 1064 20 0 7 chrUextra 1942459 1942607 -27062049 + NTS_DM Other Other 55 201 -39 7 599 21 57 0 0 chrUextra 1942607 1942642 -27062014 + AT_rich Low_complexity Low_complexity 1 35 0 7 599 832 9 9 27 chrUextra 1942668 1942779 -27061877 + NTS_DM Other Other 25 133 -107 7 599 955 29 7 7 chrUextra 1942779 1942916 -27061740 + NTS_DM Other Other 38 174 -66 7 599 5140 3 3 0 chrUextra 1942905 1943529 -27061127 - DM297_I LTR Gypsy -4902 1265 640 7 599 8689 15 2 0 chrUextra 1943629 1944699 -27059957 - STALKER4_I LTR Gypsy -296 6234 5163 7 599 21 89 0 0 chrUextra 1945123 1945179 -27059477 + AT_rich Low_complexity Low_complexity 1 56 0 7 599 23 68 0 0 chrUextra 1945217 1945261 -27059395 + AT_rich Low_complexity Low_complexity 1 44 0 7 599 2489 41 3 0 chrUextra 1945551 1945867 -27058789 - PROTOP DNA P 0 4480 4164 7 599 7668 52 7 8 chrUextra 1946000 1947037 -27057619 + R1_DM LINE R1 1 1036 -4320 7 599 870 9 0 27 chrUextra 1947148 1947260 -27057396 + NTS_DM Other Other 25 133 -107 7 599 1222 18 0 12 chrUextra 1947260 1947426 -27057230 + NTS_DM Other Other 38 201 -39 7 599 21 57 0 0 chrUextra 1947426 1947461 -27057195 + AT_rich Low_complexity Low_complexity 1 35 0 7 599 772 10 10 29 chrUextra 1947487 1947590 -27057066 + NTS_DM Other Other 25 125 -115 7 599 2328 4 0 4 chrUextra 1947590 1947866 -27056790 - BURDOCK_LTR LTR Gypsy 0 275 1 7 599 2956 0 0 3 chrUextra 1947867 1948206 -27056450 - BURDOCK_I LTR Gypsy 0 5860 5523 7 599 782 160 96 20 chrUextra 1948306 1948504 -27056152 + ROVER-I_DM LTR Gypsy 6372 6584 0 7 599 1721 131 41 33 chrUextra 1948504 1948868 -27055788 + ROVER-LTR_DM LTR Gypsy 1 367 0 7 599 647 195 99 71 chrUextra 1948868 1949321 -27055335 + ROVER-I_DM LTR Gypsy 1 466 -6118 7 599 853 18 0 27 chrUextra 1949494 1949606 -27055050 - NTS_DM Other Other -107 133 25 7 599 22 56 0 0 chrUextra 1949632 1949668 -27054988 + AT_rich Low_complexity Low_complexity 1 36 0 7 599 255 125 0 0 chrUextra 1949681 1949721 -27054935 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 599 246 150 0 0 chrUextra 1949764 1949804 -27054852 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 599 246 150 0 0 chrUextra 1949856 1949896 -27054760 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 599 246 150 0 0 chrUextra 1949948 1949988 -27054668 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 599 27 29 0 0 chrUextra 1950084 1950118 -27054538 + AT_rich Low_complexity Low_complexity 1 34 0 7 599 3079 3 0 0 chrUextra 1950190 1950544 -27054112 - LSU-rRNA_Dme rRNA rRNA 0 3900 3547 7 599 22 56 0 0 chrUextra 1950753 1950789 -27053867 + AT_rich Low_complexity Low_complexity 1 36 0 7 599 2391 166 133 18 chrUextra 1950942 1951696 -27052960 + TART LINE telomeric 8952 9726 -4751 7 599 2535 61 7 185 chrUextra 1951812 1952357 -27052299 - CIRCE LINE Composite -4936 1420 973 7 599 2778 24 147 0 chrUextra 1952499 1952880 -27051776 - CIRCE LINE Composite -5386 970 534 7 599 259 207 6 91 chrUextra 1953098 1953263 -27051393 + A-rich Low_complexity Low_complexity 1 151 0 7 599 34 24 0 0 chrUextra 1953339 1953380 -27051276 + AT_rich Low_complexity Low_complexity 1 41 0 7 599 289 200 107 0 chrUextra 1953411 1953486 -27051170 + DM297_I LTR Gypsy 400 482 -5685 7 599 1227 195 4 0 chrUextra 1953499 1953756 -27050900 + DM297_I LTR Gypsy 617 874 -5293 7 599 30 0 0 0 chrUextra 1953756 1953786 -27050870 + AT_rich Low_complexity Low_complexity 1 30 0 7 599 737 191 0 0 chrUextra 1953821 1953978 -27050678 + DM297_I LTR Gypsy 1315 1471 -4696 7 599 4591 68 2 12 chrUextra 1954148 1954790 -27049866 + R1_DM LINE R1 1609 2243 -3113 7 599 1979 67 4 0 chrUextra 1954946 1955216 -27049440 + Baggins1 LINE LOA 4791 5061 -392 7 599 2829 65 103 0 chrUextra 1955318 1955773 -27048883 + G_DM LINE Jockey 871 1372 -2974 7 599 4869 11 2 16 chrUextra 1955767 1956384 -27048272 + G_DM LINE Jockey 2076 2683 -1663 7 599 2124 180 9 23 chrUextra 1956484 1956994 -27047662 - SAR_DM Satellite Satellite -1088 502 1 7 599 2237 179 15 17 chrUextra 1957013 1957552 -27047104 - SAR_DM Satellite Satellite -396 1076 539 7 599 1583 189 92 40 chrUextra 1957652 1958010 -27046646 + DNAREP1_DM LINE Penelope 125 481 -113 7 599 190 56 27 27 chrUextra 1958010 1958047 -27046609 + (TA)n Simple_repeat Simple_repeat 1 37 0 7 599 1583 189 92 40 chrUextra 1958047 1958135 -27046521 + DNAREP1_DM LINE Penelope 482 593 -1 7 599 418 88 44 0 chrUextra 1958836 1958904 -27045752 - DNAREP1_DM LINE Penelope -2 592 522 7 599 406 149 0 0 chrUextra 1958901 1958968 -27045688 - Gypsy_LTR LTR Gypsy -415 67 1 7 599 5965 119 21 1 chrUextra 1958968 1959888 -27044768 - Gypsy_I LTR Gypsy 0 6507 5570 7 599 1293 7 0 0 chrUextra 1959988 1960139 -27044517 - G_DM LINE Jockey -4195 151 1 7 599 246 150 0 0 chrUextra 1960212 1960252 -27044404 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 599 1731 19 0 0 chrUextra 1960327 1960543 -27044113 - G_DM LINE Jockey -726 3620 3405 7 599 4183 33 0 4 chrUextra 1960539 1961055 -27043601 - G_DM LINE Jockey -1178 3168 2655 7 599 4801 2 0 0 chrUextra 1961155 1961717 -27042939 - DOC6_DM LINE Jockey -3640 582 21 7 599 26 0 0 0 chrUextra 1961742 1961768 -27042888 + AT_rich Low_complexity Low_complexity 1 26 0 7 599 1452 158 74 95 chrUextra 1961768 1962200 -27042456 + Gypsy12A_LTR LTR Gypsy 1007 1429 -851 7 599 2122 84 2 43 chrUextra 1962322 1962783 -27041873 + DMSAT6 Satellite Satellite 14 455 -15 7 599 4796 36 2 0 chrUextra 1962780 1963387 -27041269 - DMCR1A LINE CR1 -1632 2838 2231 7 599 5175 5 2 0 chrUextra 1963489 1964094 -27040562 + IVK_DM LINE I 4796 5401 -1 7 599 2715 32 0 6 chrUextra 1964211 1964556 -27040100 - DMCR1A LINE CR1 0 4470 4128 7 599 3916 9 58 0 chrUextra 1964656 1965191 -27039465 + STALKER4_I LTR Gypsy 5963 6528 -2 7 599 2202 12 0 0 chrUextra 1965193 1965449 -27039207 + STALKER4_LTR LTR Gypsy 1 256 -146 7 599 1935 9 0 4 chrUextra 1965449 1965682 -27038974 + MICROPIA_LTR LTR Gypsy 1 232 -244 7 74 3892 36 0 0 chrUextra 1965823 1966300 -27038356 + DMCR1A LINE CR1 980 1456 -3014 7 600 4301 48 29 19 chrUextra 1966302 1966890 -27037766 - DMCR1A LINE CR1 -2223 2247 1654 7 600 2305 176 23 23 chrUextra 1966992 1968056 -27036600 - SAR_DM Satellite Satellite -670 1064 1 7 600 5447 9 0 0 chrUextra 1968156 1968803 -27035853 + PROTOP_A DNA P 459 1105 0 7 600 401 231 18 9 chrUextra 1968978 1969087 -27035569 + MICROPIA_LTR LTR Gypsy 367 476 0 7 600 226 170 0 21 chrUextra 1969174 1969222 -27035434 - Gypsy12A_LTR LTR Gypsy -244 2036 1990 7 600 4735 14 5 2 chrUextra 1969322 1969902 -27034754 + R1_DM LINE R1 3701 4282 -1074 7 600 3748 32 2 2 chrUextra 1969922 1970388 -27034268 + R1_DM LINE R1 4407 4872 -484 7 600 1485 0 0 0 chrUextra 1970488 1970659 -27033997 - ROO_I LTR Pao -8085 171 1 7 600 3752 2 0 0 chrUextra 1970659 1971087 -27033569 - ROO_LTR LTR Pao 0 428 1 7 600 4042 0 0 0 chrUextra 1971087 1971554 -27033102 + ROO_I LTR Pao 4234 4700 -3556 7 600 453 49 0 0 chrUextra 1971654 1971715 -27032941 - G5A_DM LINE Jockey -549 2292 2232 7 600 285 215 138 0 chrUextra 1971743 1971864 -27032792 + BURDOCK_I LTR Gypsy 1721 1805 -3179 7 600 864 248 42 11 chrUextra 1971858 1972143 -27032513 + BURDOCK_I LTR Gypsy 2155 2448 -3412 7 600 264 188 0 0 chrUextra 1972410 1972474 -27032182 + Gypsy8_I LTR Gypsy 230 293 -4054 7 600 1947 20 20 0 chrUextra 1972474 1972720 -27031936 + PROTOP DNA P 296 546 -3934 7 600 1185 178 32 11 chrUextra 1972821 1973100 -27031556 - SAR_DM Satellite Satellite -645 827 543 7 600 3041 192 19 13 chrUextra 1973111 1973886 -27030770 - SAR_DM Satellite Satellite -396 1076 297 7 600 7885 46 16 3 chrUextra 1973986 1975052 -27029604 - R1_DM LINE R1 -4125 1231 152 7 600 1758 10 0 0 chrUextra 1975152 1975357 -27029299 + Gypsy6_I LTR Gypsy 6808 7012 0 7 600 2326 76 32 20 chrUextra 1975359 1975775 -27028881 + Gypsy6A_LTR LTR Gypsy 1 420 0 7 600 819 63 16 16 chrUextra 1975781 1975910 -27028746 + PROTOP DNA P 3346 3474 -1006 7 600 795 103 145 6 chrUextra 1975948 1976114 -27028542 + PROTOP DNA P 3726 3914 -566 7 600 385 145 15 0 chrUextra 1976122 1976207 -27028449 - DNAREP1_DM LINE Penelope -381 213 137 7 600 1991 0 0 8 chrUextra 1976318 1976558 -27028098 + Copia_I LTR Copia 4356 4593 0 7 600 2297 0 0 0 chrUextra 1976558 1976834 -27027822 + Copia_LTR LTR Copia 1 276 0 7 600 418 18 0 0 chrUextra 1976834 1976890 -27027766 + NTS_DM Other Other 78 133 -107 7 600 1252 18 0 6 chrUextra 1976890 1977055 -27027601 + NTS_DM Other Other 38 201 -39 7 600 870 9 0 27 chrUextra 1977107 1977219 -27027437 + NTS_DM Other Other 25 133 -107 7 600 1245 18 0 6 chrUextra 1977219 1977383 -27027273 + NTS_DM Other Other 38 200 -40 7 600 2705 34 0 0 chrUextra 1977483 1977834 -27026822 - IDEFIX_LTR LTR Gypsy -243 351 1 7 600 244 125 0 0 chrUextra 1977802 1977842 -27026814 + BARI1 DNA Tc1 3 42 -1708 7 600 248 170 0 0 chrUextra 1977905 1977952 -27026704 + GTWIN_I LTR Gypsy 4931 4977 -1444 7 600 212 167 0 0 chrUextra 1978070 1978112 -27026544 + A-rich Low_complexity Low_complexity 1 42 0 7 600 272 229 110 61 chrUextra 1978199 1978362 -27026294 + MDG1_I LTR Gypsy 1304 1474 -5122 7 600 7609 56 48 1 chrUextra 1978648 1979713 -27024943 + R1_DM LINE R1 194 1308 -4048 7 600 6553 15 93 1 chrUextra 1979813 1980878 -27023778 + DOC2_DM LINE Jockey 2468 3630 -1163 7 600 334 230 68 107 chrUextra 1981009 1981962 -27022694 + ROVER-I_DM LTR Gypsy 1 916 -5668 7 600 1553 145 82 3 chrUextra 1982143 1982462 -27022194 + Invader1_I LTR Gypsy 2843 3186 0 7 600 1626 128 25 35 chrUextra 1982462 1982778 -27021878 + Invader1_LTR LTR Gypsy 1 313 -110 7 600 21 0 0 0 chrUextra 1983020 1983041 -27021615 + AT_rich Low_complexity Low_complexity 1 21 0 7 600 3097 3 0 0 chrUextra 1983308 1983664 -27020992 + QUASIMODO_LTR LTR Gypsy 303 658 0 7 600 279 73 29 106 chrUextra 1983675 1983744 -27020912 - ROVER-LTR_DM LTR Gypsy -7 403 308 7 600 499 53 0 26 chrUextra 1983772 1983849 -27020807 - ROVER-LTR_DM LTR Gypsy -256 111 37 7 600 2170 160 49 10 chrUextra 1983861 1984372 -27020284 - ROVER-I_DM LTR Gypsy -4 6580 6050 7 600 3238 5 0 0 chrUextra 1984472 1984852 -27019804 - DM176_I LTR Gypsy -840 5580 5201 7 600 5843 3 9 0 chrUextra 1984848 1985536 -27019120 - DM176_I LTR Gypsy -5167 1253 560 7 600 4068 0 2 0 chrUextra 1985636 1986105 -27018551 - SSU-rRNA_Dme rRNA rRNA -837 1158 689 7 600 2862 6 0 0 chrUextra 1986105 1986435 -27018221 - TRANSPAC_LTR LTR Gypsy 0 330 1 7 600 2038 8 4 4 chrUextra 1986434 1986699 -27017957 - TRANSPAC_I LTR Gypsy 0 4590 4326 7 600 479 122 100 0 chrUextra 1987265 1987355 -27017301 + DNAREP1_DM LINE Penelope 496 594 0 7 600 33 25 0 0 chrUextra 1987411 1987451 -27017205 + AT_rich Low_complexity Low_complexity 1 40 0 7 600 33 43 0 0 chrUextra 1987472 1987519 -27017137 + AT_rich Low_complexity Low_complexity 1 47 0 7 600 2411 100 37 19 chrUextra 1987970 1989028 -27015628 + DMSAT6 Satellite Satellite 1 1077 -6 7 600 4066 4 0 0 chrUextra 1989128 1989607 -27015049 - Copia_I LTR Copia -2287 2306 1828 7 600 5050 2 2 2 chrUextra 1989601 1990192 -27014464 - Copia_I LTR Copia -3177 1416 826 7 600 9039 2 0 0 chrUextra 1990292 1991356 -27013300 + TAHRE LINE telomeric 6734 7797 -2666 7 600 3730 193 20 21 chrUextra 1991475 1992496 -27012160 + SAR_DM Satellite Satellite 57 1076 -396 7 600 895 138 76 76 chrUextra 1992690 1992980 -27011676 - Gypsy_LTR LTR Gypsy -46 436 147 7 600 800 150 118 0 chrUextra 1993490 1993643 -27011013 + DMRT1B LINE R1 4815 4985 -198 7 600 3729 188 27 30 chrUextra 1993796 1994845 -27009811 + SAR_DM Satellite Satellite 57 1101 -371 7 600 9294 1 0 0 chrUextra 1994945 1996008 -27008648 - GTWIN_I LTR Gypsy -1368 5053 3991 7 600 4101 33 255 23 chrUextra 1996108 1996817 -27007839 + MDG1_I LTR Gypsy 5723 6596 0 7 600 383 68 17 0 chrUextra 1996833 1996892 -27007764 + (TAA)n Simple_repeat Simple_repeat 3 62 0 7 600 1757 98 11 4 chrUextra 1996904 1997171 -27007485 + MDG1_LTR LTR Gypsy 123 391 -51 7 600 2876 12 0 0 chrUextra 1997271 1997609 -27007047 + FW_DM LINE Jockey 559 896 -3796 7 600 6163 11 0 0 chrUextra 1997612 1998333 -27006323 - BS LINE Jockey 0 5126 4406 7 600 468 223 8 16 chrUextra 1998433 1998556 -27006100 + HETRP_DM Satellite Satellite 1548 1669 -203 7 600 631 186 7 28 chrUextra 1998695 1998839 -27005817 + HETRP_DM Satellite Satellite 1529 1669 -203 7 600 587 222 6 19 chrUextra 1998978 1999134 -27005522 + HETRP_DM Satellite Satellite 1529 1682 -190 7 600 643 186 7 14 chrUextra 1999255 1999397 -27005259 + HETRP_DM Satellite Satellite 1529 1669 -203 7 600 3502 2 0 0 chrUextra 1999595 2000000 -27004656 - FW_DM LINE Jockey -2439 2253 1849 7 600 5895 1 36 0 chrUextra 2000000 2000657 -27003999 - FW_DM LINE Jockey -2844 1848 1168 7 600 874 0 0 0 chrUextra 2000757 2000851 -27003805 - BEL_I LTR Pao -5310 94 1 7 600 3377 0 0 0 chrUextra 2000851 2001212 -27003444 - BEL_LTR LTR Pao 0 361 1 7 600 3774 47 3 140 chrUextra 2001212 2001819 -27002837 + CIRCE LINE Composite 1066 1587 -4769 7 600 1993 0 0 0 chrUextra 2001919 2002135 -27002521 + FW_DM LINE Jockey 2966 3181 -1511 7 600 1478 108 19 11 chrUextra 2002368 2002639 -27002017 - DMSAT6 Satellite Satellite -65 405 133 7 600 4742 11 2 2 chrUextra 2003081 2003621 -27001035 - FW_DM LINE Jockey -1578 3114 2575 7 600 4560 25 2 0 chrUextra 2003615 2004143 -27000513 - FW_DM LINE Jockey -3168 1524 996 7 600 9242 19 17 13 chrUextra 2004243 2005305 -26999351 - Gypsy6_I LTR Gypsy -1366 5646 4581 7 600 3607 136 99 48 chrUextra 2005405 2006180 -26998476 + Invader1_I LTR Gypsy 2372 3186 0 7 600 1694 116 18 31 chrUextra 2006181 2006467 -26998189 + Invader1_LTR LTR Gypsy 2 283 -140 7 600 4023 180 31 28 chrUextra 2006580 2007628 -26997028 - SAR_DM Satellite Satellite -354 1051 1 7 600 5439 121 107 23 chrUextra 2007730 2008784 -26995872 + TART LINE telomeric 8950 10092 -4385 7 600 36 23 0 0 chrUextra 2008952 2008995 -26995661 + AT_rich Low_complexity Low_complexity 1 43 0 7 600 8183 62 20 12 chrUextra 2010051 2011112 -26993544 + R1_DM LINE R1 43 1111 -4245 7 600 240 30 0 83 chrUextra 2011212 2011248 -26993408 - NTS_DM Other Other -183 57 25 7 600 1332 18 0 6 chrUextra 2011300 2011465 -26993191 - NTS_DM Other Other -39 201 38 7 600 928 9 0 27 chrUextra 2011465 2011577 -26993079 - NTS_DM Other Other -107 133 25 7 600 22 56 0 0 chrUextra 2011603 2011639 -26993017 + AT_rich Low_complexity Low_complexity 1 36 0 7 600 277 176 0 19 chrUextra 2011652 2011704 -26992952 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 7 600 241 163 0 58 chrUextra 2011743 2011795 -26992861 - LSU-rRNA_Dme rRNA rRNA -1282 2618 2570 7 600 27 0 0 0 chrUextra 2011797 2011824 -26992832 + AT_rich Low_complexity Low_complexity 1 27 0 7 600 3461 0 0 3 chrUextra 2011896 2012270 -26992386 - LSU-rRNA_Dme rRNA rRNA 0 3900 3528 7 600 523 129 0 0 chrUextra 2012387 2012472 -26992184 - MICROPIA_LTR LTR Gypsy -159 317 233 7 600 25 0 0 0 chrUextra 2012831 2012856 -26991800 + AT_rich Low_complexity Low_complexity 1 25 0 7 600 220 266 0 0 chrUextra 2012867 2012931 -26991725 + T-rich Low_complexity Low_complexity 2 65 0 7 600 468 0 0 0 chrUextra 2012951 2013003 -26991653 + (TA)n Simple_repeat Simple_repeat 2 53 0 7 600 1762 85 68 0 chrUextra 2013026 2013274 -26991382 + Gypsy9_LTR LTR Gypsy 1 265 -71 7 600 952 103 138 0 chrUextra 2013259 2013433 -26991223 + Gypsy9_I LTR Gypsy 12 209 -4468 7 600 9603 0 0 0 chrUextra 2013533 2014593 -26990063 - ACCORD_I LTR Gypsy -958 5330 4271 7 600 3137 132 11 13 chrUextra 2014693 2015215 -26989441 + TAHRE LINE telomeric 9942 10462 -1 7 600 642 14 0 0 chrUextra 2015201 2015273 -26989383 + TAHRE LINE telomeric 10380 10451 -12 7 600 1034 157 63 81 chrUextra 2015262 2015751 -26988905 + HETA LINE telomeric 1 616 -5465 7 600 2797 94 20 13 chrUextra 2015853 2016912 -26987744 + DMSAT6 Satellite Satellite 1 1066 -40 7 600 437 250 93 44 chrUextra 2017012 2017229 -26987427 - Gypsy12_LTR LTR Gypsy -440 1896 1640 7 600 736 248 36 73 chrUextra 2017247 2017577 -26987079 - Gypsy12_LTR LTR Gypsy -1187 1149 832 7 600 1141 159 14 28 chrUextra 2017670 2017884 -26986772 - Gypsy12_LTR LTR Gypsy -2125 211 1 7 600 1477 75 0 0 chrUextra 2017884 2018071 -26986585 - Gypsy12_I LTR Gypsy 0 5546 5360 7 600 1998 174 74 51 chrUextra 2018171 2018729 -26985927 + TART LINE telomeric 3620 3997 -10480 7 600 3393 107 2 20 chrUextra 2018723 2019229 -26985427 + TART LINE telomeric 6753 7249 -7228 7 600 2119 101 34 67 chrUextra 2019331 2019823 -26984833 - HETA LINE telomeric -5453 628 1 7 600 322 0 0 111 chrUextra 2019836 2019890 -26984766 - TAHRE LINE telomeric -3813 10664 10628 7 600 328 0 0 0 chrUextra 2019892 2019929 -26984727 - HETA LINE telomeric 0 6081 6045 7 600 2538 160 13 11 chrUextra 2019928 2020389 -26984267 - TAHRE LINE telomeric -12 10451 9990 7 600 2121 139 33 36 chrUextra 2020489 2020878 -26983778 - Invader1_LTR LTR Gypsy -35 388 1 7 600 240 111 0 0 chrUextra 2020928 2020973 -26983683 + (A)n Simple_repeat Simple_repeat 1 45 0 7 600 718 79 10 0 chrUextra 2020976 2021077 -26983579 + DMRT1C LINE R1 3489 3590 -1853 7 600 845 62 208 0 chrUextra 2021075 2021219 -26983437 - DOC5_DM LINE Jockey -4092 590 417 7 600 300 200 42 14 chrUextra 2021216 2021287 -26983369 + DMRT1B LINE R1 298 370 -4813 7 600 1846 55 4 34 chrUextra 2021283 2021545 -26983111 + Gypsy7_I LTR Gypsy 17 270 -4714 7 600 7266 65 29 36 chrUextra 2021648 2022707 -26981949 + TART LINE telomeric 2286 3337 -11140 7 600 2663 100 21 32 chrUextra 2022807 2023859 -26980797 + DMSAT6 Satellite Satellite 1 1039 -74 7 600 30 27 0 0 chrUextra 2024574 2024611 -26980045 + AT_rich Low_complexity Low_complexity 1 37 0 7 600 997 70 4 20 chrUextra 2025185 2026181 -26978475 - RSP Satellite Satellite 0 980 1 7 600 5800 17 21 0 chrUextra 2026281 2026939 -26977717 - FW_DM LINE Jockey -4020 672 1 7 600 3392 38 0 0 chrUextra 2026946 2027339 -26977317 + R1_DM LINE R1 1397 1789 -3567 7 600 9497 13 0 6 chrUextra 2027439 2028497 -26976159 - Gypsy2_I LTR Gypsy -4848 1287 236 7 600 3377 180 8 11 chrUextra 2028597 2029655 -26975001 - SAR_DM Satellite Satellite -664 1053 1 7 600 1669 26 0 10 chrUextra 2029755 2029949 -26974707 + PROTOP DNA P 4289 4480 0 7 600 26 30 0 0 chrUextra 2030322 2030355 -26974301 + AT_rich Low_complexity Low_complexity 1 33 0 7 600 23 68 0 0 chrUextra 2030401 2030445 -26974211 + AT_rich Low_complexity Low_complexity 1 44 0 7 600 28 79 0 0 chrUextra 2030476 2030539 -26974117 + AT_rich Low_complexity Low_complexity 1 63 0 7 600 1585 174 6 6 chrUextra 2030913 2031231 -26973425 + SAR_DM Satellite Satellite 406 723 -749 7 600 3339 193 7 7 chrUextra 2031242 2031971 -26972685 + SAR_DM Satellite Satellite 256 984 -488 7 600 940 0 0 0 chrUextra 2032071 2032172 -26972484 - BEL_I LTR Pao -5303 101 1 7 600 3294 0 11 0 chrUextra 2032172 2032529 -26972127 - BEL_LTR LTR Pao 0 361 1 7 600 523 71 0 0 chrUextra 2032529 2032599 -26972057 + QUASIMODO_I LTR Gypsy 5105 5174 -886 7 600 1740 58 16 0 chrUextra 2032589 2032846 -26971810 + QUASIMODO_I LTR Gypsy 5467 5727 -333 7 600 461 225 31 47 chrUextra 2032897 2033129 -26971527 + QUASIMODO_LTR LTR Gypsy 29 379 -279 7 600 7452 45 74 14 chrUextra 2033230 2034273 -26970383 + Baggins1 LINE LOA 4078 5182 -271 7 600 3273 110 27 72 chrUextra 2034390 2035009 -26969647 + Gypsy8_I LTR Gypsy 1035 1533 -2814 7 600 383 123 62 0 chrUextra 2035010 2035075 -26969581 - I_DM LINE I -6057 174 106 7 600 35 71 0 0 chrUextra 2035082 2035152 -26969504 + AT_rich Low_complexity Low_complexity 1 70 0 7 600 1542 75 9 27 chrUextra 2035152 2035372 -26969284 - DMCR1A LINE CR1 0 4470 4255 7 600 549 79 13 0 chrUextra 2035367 2035443 -26969213 - DMCR1A LINE CR1 -2868 1602 1526 7 600 2548 99 17 26 chrUextra 2035543 2036600 -26968056 + DMSAT6 Satellite Satellite 1 1046 -3 7 600 4240 40 8 11 chrUextra 2036721 2037254 -26967402 - BATUMI_I LTR Pao -962 7001 6471 7 600 3170 75 126 0 chrUextra 2037249 2037756 -26966900 + BATUMI_I LTR Pao 7344 7914 -49 7 600 263 91 0 0 chrUextra 2038109 2038142 -26966514 + Baggins1 LINE LOA 4727 4759 -694 7 600 784 76 248 7 chrUextra 2038147 2038292 -26966364 - FB4_DM DNA Tc1 -3907 182 3 7 600 1892 5 37 0 chrUextra 2039013 2039229 -26965427 + Gypsy4_I LTR Gypsy 3673 3896 -2392 7 600 7010 16 54 0 chrUextra 2039242 2040069 -26964587 + Gypsy4_I LTR Gypsy 3950 4821 -1467 7 600 2212 23 8 0 chrUextra 2040169 2040429 -26964227 - R1_DM LINE R1 -342 5014 4753 7 600 6101 35 26 35 chrUextra 2040430 2041225 -26963431 + R1_DM LINE R1 409 1196 -4160 7 600 5265 22 56 4 chrUextra 2041325 2042381 -26962275 + FW_DM LINE Jockey 3264 4374 -318 7 600 8153 49 21 4 chrUextra 2042481 2043537 -26961119 - IDEFIX_I LTR Gypsy -1941 3687 2614 7 600 717 209 6 19 chrUextra 2043749 2043905 -26960751 - HETRP_DM Satellite Satellite -190 1682 1529 7 600 734 184 13 26 chrUextra 2044058 2044214 -26960442 - HETRP_DM Satellite Satellite -190 1682 1529 7 600 726 209 6 19 chrUextra 2044367 2044523 -26960133 - HETRP_DM Satellite Satellite -190 1682 1529 7 600 1223 58 116 0 chrUextra 2045313 2045485 -26959171 - PROTOP_B DNA P 0 1153 962 7 600 1012 142 76 76 chrUextra 2045528 2045818 -26958838 - Gypsy_LTR LTR Gypsy -46 436 147 7 600 1128 262 47 52 chrUextra 2045958 2046380 -26958276 - Gypsy12_LTR LTR Gypsy -1725 611 192 7 600 4846 86 0 2 chrUextra 2046385 2047005 -26957651 - Gypsy12_I LTR Gypsy -27 5519 4901 7 600 9829 2 0 0 chrUextra 2047105 2048161 -26956495 + TART_B1 LINE telomeric 9354 10409 -245 7 600 904 0 0 0 chrUextra 2048261 2048371 -26956285 + Stalker2_I LTR Gypsy 7293 7402 0 7 600 3857 0 0 2 chrUextra 2048371 2048796 -26955860 + Stalker2_LTR LTR Gypsy 1 424 0 7 600 744 211 12 18 chrUextra 2048881 2049050 -26955606 + HETRP_DM Satellite Satellite 1518 1685 -187 7 600 600 185 0 9 chrUextra 2049208 2049317 -26955339 + HETRP_DM Satellite Satellite 1529 1636 -236 7 600 24 0 0 0 chrUextra 2049855 2049879 -26954777 + AT_rich Low_complexity Low_complexity 1 24 0 7 600 24 32 0 0 chrUextra 2049908 2049939 -26954717 + AT_rich Low_complexity Low_complexity 1 31 0 7 600 621 67 11 22 chrUextra 2050038 2050130 -26954526 - BS3_DM LINE Jockey 0 1790 1700 7 600 649 258 5 37 chrUextra 2050572 2050761 -26953895 + ROVER-I_DM LTR Gypsy 1890 2072 -4512 7 600 1504 219 67 6 chrUextra 2050759 2051118 -26953538 + ROVER-I_DM LTR Gypsy 2298 2678 -3906 7 600 383 303 62 62 chrUextra 2051163 2051582 -26953074 - BLASTOPIA_I LTR Gypsy -1885 2596 2178 7 600 2474 93 0 0 chrUextra 2051728 2052073 -26952583 + DMRT1C LINE R1 2678 3022 -2421 7 600 895 71 0 0 chrUextra 2052074 2052186 -26952470 + DMRT1C LINE R1 4367 4478 -965 7 600 4802 45 52 0 chrUextra 2052184 2052782 -26951874 + DMRT1C LINE R1 4659 5287 -156 7 600 4152 199 15 19 chrUextra 2052884 2053937 -26950719 + SAR_DM Satellite Satellite 167 1215 -257 7 600 5720 20 76 0 chrUextra 2054037 2055092 -26949564 - STALKER4_I LTR Gypsy -2744 3786 2652 7 600 227 274 14 14 chrUextra 2055954 2056028 -26948628 + DIVER2_I LTR Pao 1965 2038 -2109 7 600 4208 21 4 0 chrUextra 2056347 2056831 -26947825 + R1_DM LINE R1 3843 4328 -1028 7 600 4017 27 106 7 chrUextra 2056830 2057378 -26947278 + R1_DM LINE R1 4465 5066 -290 7 600 229 37 0 0 chrUextra 2057375 2057402 -26947254 + R1_DM LINE R1 5243 5269 -87 7 600 396 143 0 0 chrUextra 2057583 2057640 -26947016 - DNAREP1_DM LINE Penelope -479 115 59 7 600 2026 38 4 0 chrUextra 2057640 2057878 -26946778 + Gypsy6A_LTR LTR Gypsy 1 239 -181 7 600 244 132 0 0 chrUextra 2057877 2057915 -26946741 + Gypsy6A_LTR LTR Gypsy 371 408 -12 7 600 5422 21 2 28 chrUextra 2057915 2058557 -26946099 + Gypsy12_LTR LTR Gypsy 1 625 -1711 7 600 8721 54 0 0 chrUextra 2058657 2059712 -26944944 - IDEFIX_I LTR Gypsy -2987 2641 1587 7 600 3557 71 52 15 chrUextra 2059812 2060330 -26944326 + HETA LINE telomeric 3320 3856 -2225 7 600 4251 63 2 5 chrUextra 2060312 2060867 -26943789 + HETA LINE telomeric 691 1243 -4838 7 600 8913 28 2 9 chrUextra 2060967 2062021 -26942635 + FW_DM LINE Jockey 1120 2165 -2527 7 600 2338 300 41 47 chrUextra 2062121 2063171 -26941485 - MICROPIA_I LTR Gypsy -1897 2579 1536 7 600 7304 82 47 8 chrUextra 2063275 2064301 -26940355 - R1_DM LINE R1 -3693 1663 598 7 600 2641 90 50 15 chrUextra 2064429 2065483 -26939173 - DMSAT6 Satellite Satellite -59 1090 1 7 600 4079 189 16 20 chrUextra 2065584 2066518 -26938138 + SAR_DM Satellite Satellite 335 1264 -208 7 600 852 76 0 0 chrUextra 2066518 2066637 -26938019 - ARS406_DM Unknown Unknown -195 158 40 7 600 740 119 76 44 chrUextra 2066771 2066929 -26937727 - DNAREP1_DM LINE Penelope -415 179 17 7 600 21 0 0 0 chrUextra 2068313 2068334 -26936322 + AT_rich Low_complexity Low_complexity 1 21 0 7 600 21 0 0 0 chrUextra 2068446 2068467 -26936189 + AT_rich Low_complexity Low_complexity 1 21 0 7 600 9097 30 30 0 chrUextra 2069045 2070098 -26934558 - DIVER_I LTR Pao -130 5513 4429 7 600 8680 28 47 1 chrUextra 2070198 2071229 -26933427 - FW_DM LINE Jockey -3614 1078 1 7 600 434 83 0 0 chrUextra 2071352 2071412 -26933244 + DMRT1C LINE R1 2574 2633 -2810 7 600 2752 90 0 3 chrUextra 2071473 2071863 -26932793 + DMRT1C LINE R1 2634 3022 -2421 7 600 587 42 0 0 chrUextra 2071864 2071935 -26932721 + DMRT1C LINE R1 4367 4437 -1006 7 600 3599 52 67 0 chrUextra 2071941 2072404 -26932252 + DMRT1C LINE R1 4659 5152 -291 7 600 7483 71 26 7 chrUextra 2072504 2073531 -26931125 + QUASIMODO_I LTR Gypsy 564 1610 -4450 7 600 33 25 0 0 chrUextra 2074309 2074349 -26930307 + AT_rich Low_complexity Low_complexity 1 40 0 7 600 496 133 100 0 chrUextra 2074402 2074492 -26930164 - DNAREP1_DM LINE Penelope 0 594 496 7 600 6156 36 12 13 chrUextra 2074810 2075579 -26929077 - BATUMI_I LTR Pao -5421 2542 1775 7 600 2427 21 67 0 chrUextra 2075579 2075863 -26928793 + PROTOP_A DNA P 1 303 -802 7 600 4192 108 33 52 chrUextra 2075963 2077016 -26927640 + TART LINE telomeric 10155 10663 -3814 7 600 8473 37 27 16 chrUextra 2077116 2078165 -26926491 + CIRCE LINE Composite 2202 3261 -3095 7 600 1926 78 25 67 chrUextra 2078771 2079086 -26925570 + Gypsy6A_LTR LTR Gypsy 1 302 -118 7 600 182 91 0 29 chrUextra 2079159 2079193 -26925463 + (CCA)n Simple_repeat Simple_repeat 2 34 0 7 600 4706 41 140 16 chrUextra 2079420 2080062 -26924594 - R1_DM LINE R1 -3985 1371 650 7 600 2059 9 0 0 chrUextra 2080057 2080283 -26924373 + MICROPIA_LTR LTR Gypsy 7 232 -244 7 600 1437 12 0 0 chrUextra 2080309 2080472 -26924184 + MICROPIA_LTR LTR Gypsy 229 391 -85 7 600 8721 20 27 2 chrUextra 2080572 2081624 -26923032 - Invader2_I LTR Gypsy -2094 2498 1421 7 600 1532 101 5 0 chrUextra 2081724 2081933 -26922723 + Gypsy12_I LTR Gypsy 794 1003 -4543 7 600 467 65 0 0 chrUextra 2081922 2081984 -26922672 + Gypsy12_I LTR Gypsy 5482 5543 -3 7 600 1566 113 12 25 chrUextra 2081988 2082227 -26922429 + Gypsy12_LTR LTR Gypsy 1 236 -2100 7 600 3282 29 11 0 chrUextra 2082227 2082605 -26922051 + DIVER2_LTR LTR Pao 4 385 0 7 600 1349 65 0 0 chrUextra 2082605 2082775 -26921881 + DIVER2_I LTR Pao 1 170 -3977 7 600 1393 137 20 27 chrUextra 2082875 2083148 -26921508 - DMRT1B LINE R1 -4847 336 1 7 600 4268 201 13 18 chrUextra 2084026 2085056 -26919600 - SAR_DM Satellite Satellite -268 1204 180 7 600 832 110 0 0 chrUextra 2084950 2085077 -26919579 + ARS406_DM Unknown Unknown 1 127 -226 7 600 3079 169 39 10 chrUextra 2085177 2086228 -26918428 + SAR_DM Satellite Satellite 1 1080 -677 7 600 3735 204 28 44 chrUextra 2086361 2087366 -26917290 - TART_B1 LINE telomeric -8838 1816 828 7 600 4128 194 32 35 chrUextra 2087479 2088530 -26916126 + SAR_DM Satellite Satellite 1 1048 -203 7 600 2778 3 3 0 chrUextra 2088630 2088933 -26915723 - HMSBEAGLE_I LTR Gypsy -6225 304 1 7 600 2466 8 0 0 chrUextra 2088932 2089198 -26915458 - DMLTR5 LTR Gypsy 0 266 1 7 600 300 111 0 0 chrUextra 2089199 2089244 -26915412 + (CATA)n Simple_repeat Simple_repeat 2 46 0 7 600 2299 15 7 11 chrUextra 2089244 2089520 -26915136 - BLASTOPIA_LTR LTR Gypsy 0 275 1 7 600 1413 6 0 0 chrUextra 2089520 2089677 -26914979 - BLASTOPIA_I LTR Gypsy 0 4481 4325 7 600 2344 173 33 47 chrUextra 2089780 2090637 -26914019 - SAR_DM Satellite Satellite -699 844 1 7 600 545 189 0 0 chrUextra 2090545 2090656 -26914000 + ARS406_DM Unknown Unknown 6 116 -237 7 600 791 192 12 0 chrUextra 2090657 2090829 -26913827 - SAR_DM Satellite Satellite -683 789 616 7 600 1192 311 45 42 chrUextra 2090930 2091976 -26912680 + MDG1_I LTR Gypsy 1521 2465 -4148 7 600 1152 38 0 0 chrUextra 2092080 2092212 -26912444 + DMCR1A LINE CR1 974 1105 -3365 7 600 7799 33 26 0 chrUextra 2092214 2093130 -26911526 + DMCR1A LINE CR1 1213 2152 -2318 7 600 3750 103 105 4 chrUextra 2093231 2094273 -26910383 + Gypsy12_I LTR Gypsy 3688 4895 -651 7 600 3757 12 0 2 chrUextra 2094380 2094807 -26909849 + QUASIMODO_I LTR Gypsy 2281 2706 -3354 7 600 5343 24 18 2 chrUextra 2094802 2095430 -26909226 + QUASIMODO_I LTR Gypsy 2858 3495 -2565 7 600 4269 195 26 15 chrUextra 2095534 2096576 -26908080 + SAR_DM Satellite Satellite 212 1264 -208 7 600 3643 54 9 4 chrUextra 2096680 2097147 -26907509 + DMRT1C LINE R1 3999 4467 -976 7 9 33 85 0 0 chrUextra 2097147 2097229 -26907427 + AT_rich Low_complexity Low_complexity 1 82 0 7 601 310 73 17 83 chrUextra 2097241 2097301 -26907355 + PROTOP DNA P 1014 1069 -3411 7 601 1294 73 8 19 chrUextra 2097293 2097548 -26907108 + PROTOP DNA P 3940 4112 -368 7 601 1198 29 0 7 chrUextra 2097545 2097686 -26906970 + PROTOP DNA P 4340 4479 -1 7 601 257 231 0 0 chrUextra 2097840 2097892 -26906764 + MICROPIA_I LTR Gypsy 3799 3850 -626 7 601 22 80 0 0 chrUextra 2098615 2098665 -26905991 + AT_rich Low_complexity Low_complexity 1 50 0 7 601 4023 30 60 4 chrUextra 2098978 2099482 -26905174 - R1_DM LINE R1 -1048 4308 3777 7 601 4518 35 11 0 chrUextra 2099483 2100027 -26904629 - R1_DM LINE R1 -2243 3113 2564 7 601 2926 33 19 24 chrUextra 2100141 2100510 -26904146 + ROVER-LTR_DM LTR Gypsy 1 367 0 7 601 193 0 61 30 chrUextra 2100510 2100543 -26904113 + (TATAA)n Simple_repeat Simple_repeat 5 38 0 7 601 1635 217 48 13 chrUextra 2100551 2101175 -26903481 + HETA LINE telomeric 869 1593 -4488 7 601 305 138 0 33 chrUextra 2101279 2101339 -26903317 + Stalker3_LTR LTR Gypsy 315 372 0 7 601 25 0 0 0 chrUextra 2101427 2101452 -26903204 + AT_rich Low_complexity Low_complexity 1 25 0 7 601 2867 146 72 48 chrUextra 2101476 2102325 -26902331 + STALKER4_I LTR Gypsy 291 1207 -5323 7 601 9165 30 7 1 chrUextra 2102425 2103474 -26901182 - Gypsy3_I LTR Gypsy -400 5777 4723 7 601 377 0 0 0 chrUextra 2103574 2103620 -26901036 + NTS_DM Other Other 88 133 -107 7 601 1350 18 0 6 chrUextra 2103620 2103785 -26900871 + NTS_DM Other Other 38 201 -39 7 601 936 9 0 27 chrUextra 2103837 2103949 -26900707 + NTS_DM Other Other 25 133 -107 7 601 788 0 0 0 chrUextra 2103949 2104035 -26900621 + NTS_DM Other Other 38 123 -117 7 601 2466 8 0 0 chrUextra 2104035 2104301 -26900355 - DMLTR5 LTR Gypsy 0 266 1 7 601 2940 0 0 0 chrUextra 2104301 2104623 -26900033 - HMSBEAGLE_I LTR Gypsy 0 6529 6208 7 601 5389 166 15 29 chrUextra 2104723 2105772 -26898884 - HETA LINE telomeric -2377 3704 2707 7 601 3471 91 0 0 chrUextra 2105872 2106313 -26898343 - HMSBEAGLE_I LTR Gypsy -2315 4214 3774 7 601 2347 57 0 0 chrUextra 2106321 2106604 -26898052 + BATUMI_I LTR Pao 2325 2607 -5356 7 601 2003 76 30 24 chrUextra 2106624 2106921 -26897735 + BATUMI_I LTR Pao 2590 2888 -5075 7 601 21 0 0 0 chrUextra 2107413 2107434 -26897222 + AT_rich Low_complexity Low_complexity 1 21 0 7 601 3760 9 2 0 chrUextra 2108169 2108594 -26896062 + FW_DM LINE Jockey 4267 4692 0 7 601 2810 174 24 8 chrUextra 2108596 2108763 -26895893 - SAR_DM Satellite Satellite -604 868 701 7 601 221 0 35 0 chrUextra 2108763 2108792 -26895864 + (TAA)n Simple_repeat Simple_repeat 2 31 0 7 601 2810 174 24 8 chrUextra 2108792 2109217 -26895439 - SAR_DM Satellite Satellite -772 700 268 7 601 2129 302 58 20 chrUextra 2109557 2110365 -26894291 + NINJA_I LTR Pao 2898 3736 -2275 7 601 213 39 0 0 chrUextra 2110531 2110557 -26894099 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 7 601 695 150 240 7 chrUextra 2110557 2110705 -26893951 + DNAREP1_DM LINE Penelope 22 205 -389 7 601 2127 63 7 14 chrUextra 2111613 2111903 -26892753 - R1_DM LINE R1 -5046 310 23 7 601 3522 29 156 0 chrUextra 2111924 2112661 -26891995 - R1_DM LINE R1 0 5356 4505 7 601 5682 77 6 1 chrUextra 2112761 2113542 -26891114 - IDEFIX_I LTR Gypsy -455 5173 4389 7 601 1788 260 0 2 chrUextra 2113909 2114367 -26890289 - G6_DM LINE Jockey -871 1171 715 7 601 1522 18 0 0 chrUextra 2114373 2114541 -26890115 - PROTOP_A DNA P -937 168 1 7 601 3608 19 7 0 chrUextra 2114541 2114957 -26889699 + R1_DM LINE R1 2540 2958 -2398 7 601 2934 27 0 6 chrUextra 2115057 2115398 -26889258 + R1_DM LINE R1 4931 5269 -87 7 601 4149 69 2 6 chrUextra 2115399 2115936 -26888720 + R1_DM LINE R1 77 611 -4745 7 601 1361 72 0 0 chrUextra 2115938 2116105 -26888551 + R1_DM LINE R1 1247 1413 -3943 7 601 3088 180 36 37 chrUextra 2116206 2117249 -26887407 + SAR_DM Satellite Satellite 1 1042 -666 7 601 1437 38 0 0 chrUextra 2117353 2117614 -26887042 + (TTA)n Simple_repeat Simple_repeat 1 261 0 7 601 297 168 0 87 chrUextra 2117619 2117723 -26886933 - DM412 LTR Gypsy -98 6799 6705 7 601 408 121 43 25 chrUextra 2117718 2117879 -26886777 - MDG1_I LTR Gypsy -38 6558 6395 7 601 3793 57 87 0 chrUextra 2117894 2118400 -26886256 + DM297_I LTR Gypsy 2983 3532 -2635 7 601 8907 36 6 1 chrUextra 2118500 2119547 -26885109 + R1_DM LINE R1 1010 2061 -3295 7 601 22 0 0 0 chrUextra 2120041 2120063 -26884593 + AT_rich Low_complexity Low_complexity 1 22 0 7 601 3498 5 0 3 chrUextra 2120794 2121179 -26883477 - DOC LINE Jockey -4310 415 32 7 601 5670 16 2 0 chrUextra 2121210 2121841 -26882815 + R1_DM LINE R1 3945 4576 -780 7 601 3870 197 28 34 chrUextra 2121945 2122985 -26881671 + SAR_DM Satellite Satellite 57 1090 -382 7 601 3437 196 142 19 chrUextra 2123112 2124135 -26880521 - TART LINE telomeric -4001 10476 9325 7 601 4235 189 27 24 chrUextra 2124235 2125266 -26879390 - SAR_DM Satellite Satellite -259 1213 180 7 601 759 99 0 16 chrUextra 2125158 2125281 -26879375 + ARS406_DM Unknown Unknown 1 121 -232 7 601 5179 3 0 3 chrUextra 2125381 2125959 -26878697 + DOC LINE Jockey 4144 4719 -6 7 601 552 167 83 0 chrUextra 2125957 2126077 -26878579 + DMCR1A LINE CR1 2276 2405 -2065 7 601 789 251 107 11 chrUextra 2126136 2126406 -26878250 - BS LINE Jockey -1688 3438 3143 7 601 584 185 78 24 chrUextra 2126527 2126693 -26877963 - DNAREP1_DM LINE Penelope -272 322 148 7 601 538 192 192 0 chrUextra 2126682 2126802 -26877854 + DMCR1A LINE CR1 2719 2861 -1609 7 601 4845 4 6 0 chrUextra 2127673 2128208 -26876448 + TART LINE telomeric 10126 10663 -3814 7 601 2716 28 0 27 chrUextra 2128210 2128719 -26875937 + HETRP_DM Satellite Satellite 1 495 -1284 7 601 728 179 7 14 chrUextra 2128819 2128961 -26875695 - HETRP_DM Satellite Satellite -203 1669 1529 7 601 556 199 22 30 chrUextra 2129110 2129245 -26875411 - HETRP_DM Satellite Satellite -190 1682 1549 7 601 192 40 0 0 chrUextra 2129245 2129270 -26875386 + (TC)n Simple_repeat Simple_repeat 2 26 0 7 601 697 201 13 25 chrUextra 2129385 2129543 -26875113 - HETRP_DM Satellite Satellite -188 1684 1529 7 601 671 202 12 58 chrUextra 2129662 2129835 -26874821 - HETRP_DM Satellite Satellite -190 1682 1518 7 601 5799 2 2 0 chrUextra 2129965 2130599 -26874057 - FW_DM LINE Jockey -4057 635 1 7 601 3335 27 74 0 chrUextra 2130608 2131011 -26873645 - R1_DM LINE R1 -1066 4290 3858 7 601 5344 2 53 0 chrUextra 2131111 2132157 -26872499 - DM176_I LTR Gypsy -1400 5020 3920 7 601 1277 26 13 0 chrUextra 2132257 2132412 -26872244 - BATUMI_I LTR Pao -1380 6583 6427 7 601 2125 23 0 4 chrUextra 2132435 2132695 -26871961 + BATUMI_I LTR Pao 7303 7561 -402 7 601 640 49 0 24 chrUextra 2132695 2132778 -26871878 + BATUMI_I LTR Pao 7083 7163 -800 7 601 4421 36 0 4 chrUextra 2132779 2133302 -26871354 + G_DM LINE Jockey 2588 3108 -1238 7 601 2494 109 29 36 chrUextra 2133402 2134447 -26870209 - DMSAT6 Satellite Satellite -111 1036 1 7 601 3798 206 16 23 chrUextra 2134547 2135569 -26869087 + SAR_DM Satellite Satellite 1 1014 -216 7 601 437 186 0 20 chrUextra 2135493 2135592 -26869064 - XDMR_DM Unknown Unknown -10 350 254 7 601 345 96 19 37 chrUextra 2135905 2135959 -26868697 - Gypsy5_I LTR Gypsy -6456 53 1 7 601 1276 172 17 53 chrUextra 2136100 2136400 -26868256 - Gypsy5_LTR LTR Gypsy -141 289 1 7 601 2427 110 12 0 chrUextra 2136400 2136737 -26867919 + Invader2_I LTR Gypsy 620 960 -3632 7 601 7638 46 32 1 chrUextra 2136837 2137774 -26866882 - R1_DM LINE R1 -3753 1603 638 7 601 789 91 0 0 chrUextra 2137772 2137882 -26866774 - R1_DM LINE R1 -5188 168 59 7 601 905 22 29 29 chrUextra 2137982 2138120 -26866536 + NTS_DM Other Other 103 240 0 7 601 1880 17 17 17 chrUextra 2138120 2138360 -26866296 + NTS_DM Other Other 1 240 0 7 601 951 10 0 0 chrUextra 2138360 2138464 -26866192 + NTS_DM Other Other 1 104 -136 7 601 3072 3 0 0 chrUextra 2138464 2138794 -26865862 - TRANSPAC_LTR LTR Gypsy 0 330 1 7 601 1925 9 0 8 chrUextra 2138793 2139027 -26865629 - TRANSPAC_I LTR Gypsy 0 4590 4359 7 601 3233 146 5 14 chrUextra 2139127 2139682 -26864974 + TAHRE LINE telomeric 9912 10461 -2 7 601 1175 136 35 111 chrUextra 2139722 2140127 -26864529 + HETA LINE telomeric 1 374 -5707 7 601 3046 15 0 3 chrUextra 2140272 2140614 -26864042 - STALKER4_LTR LTR Gypsy -61 341 1 7 601 893 9 0 9 chrUextra 2140614 2140729 -26863927 - STALKER4_I LTR Gypsy 0 6530 6417 7 601 2145 35 3 37 chrUextra 2140729 2141022 -26863634 - BATUMI_I LTR Pao -679 7284 7002 7 601 2648 0 0 7 chrUextra 2141022 2141317 -26863339 - BATUMI_I LTR Pao 0 7963 7671 7 601 3344 6 3 0 chrUextra 2141417 2141782 -26862874 + Invader1_LTR LTR Gypsy 58 423 0 7 601 695 190 11 69 chrUextra 2141785 2141960 -26862696 - HETRP_DM Satellite Satellite -190 1682 1518 7 601 524 241 7 22 chrUextra 2142062 2142198 -26862458 - HETRP_DM Satellite Satellite -190 1682 1549 7 601 246 32 0 0 chrUextra 2142198 2142229 -26862427 + (TC)n Simple_repeat Simple_repeat 2 32 0 7 601 351 225 0 12 chrUextra 2142373 2142454 -26862202 - HETRP_DM Satellite Satellite -190 1682 1603 7 601 204 186 34 0 chrUextra 2142561 2142620 -26862036 + (TAA)n Simple_repeat Simple_repeat 2 62 0 7 601 22 35 0 0 chrUextra 2142815 2142844 -26861812 + AT_rich Low_complexity Low_complexity 1 29 0 7 601 220 141 46 15 chrUextra 2143131 2143196 -26861460 + (TAA)n Simple_repeat Simple_repeat 2 68 0 7 601 10594 176 42 39 chrUextra 2143705 2145893 -26858763 - R1_DM LINE R1 -448 4908 2714 7 601 2308 128 15 37 chrUextra 2146021 2146502 -26858154 + DMSAT6 Satellite Satellite 1 470 0 7 601 2366 113 21 52 chrUextra 2146519 2147004 -26857652 + DMSAT6 Satellite Satellite 1 470 0 7 601 479 186 0 19 chrUextra 2147137 2147241 -26857415 + XDMR_DM Unknown Unknown 249 350 -10 7 601 2783 175 26 22 chrUextra 2147165 2148169 -26856487 - SAR_DM Satellite Satellite -354 1007 1 7 601 556 134 71 0 chrUextra 2148069 2148181 -26856475 + ARS406_DM Unknown Unknown 1 120 -233 7 601 1255 288 52 8 chrUextra 2148281 2148795 -26855861 + ROVER-I_DM LTR Gypsy 1158 1694 -4890 7 601 1018 244 4 29 chrUextra 2148775 2149050 -26855606 + ROVER-I_DM LTR Gypsy 1805 2072 -4512 7 601 1230 196 87 7 chrUextra 2149048 2149325 -26855331 + ROVER-I_DM LTR Gypsy 2298 2596 -3988 7 601 814 37 0 115 chrUextra 2149487 2149609 -26855047 + Baggins1 LINE LOA 5346 5453 0 7 601 3122 63 5 17 chrUextra 2150037 2150443 -26854213 + Baggins1 LINE LOA 4791 5191 -262 7 601 1891 0 9 0 chrUextra 2150572 2150787 -26853869 - Copia_I LTR Copia -4376 217 1 7 601 2405 0 4 0 chrUextra 2150787 2151062 -26853594 - Copia_LTR LTR Copia 0 276 1 7 601 234 122 0 0 chrUextra 2151062 2151108 -26853548 - PROTOP DNA P -426 4054 4009 7 601 225 37 0 0 chrUextra 2151104 2151131 -26853525 - PROTOP DNA P -2881 1599 1573 7 601 577 205 0 39 chrUextra 2151245 2151372 -26853284 + STALKER4_I LTR Gypsy 3692 3813 -2717 7 601 239 149 43 0 chrUextra 2151363 2151410 -26853246 + TABOR_I LTR Gypsy 3604 3652 -2684 7 601 949 164 33 0 chrUextra 2151430 2151613 -26853043 + I_DM LINE I 2127 2315 -3916 7 601 1310 101 24 19 chrUextra 2151973 2152186 -26852470 - DMCR1A LINE CR1 -179 4291 4078 7 601 4983 35 0 0 chrUextra 2152183 2152756 -26851900 - DMCR1A LINE CR1 -357 4113 3541 7 601 352 179 47 23 chrUextra 2153702 2153788 -26850868 + DNAREP1_DM LINE Penelope 475 562 -32 7 601 21 0 0 0 chrUextra 2153829 2153850 -26850806 + AT_rich Low_complexity Low_complexity 1 21 0 7 601 3772 19 0 0 chrUextra 2153999 2154420 -26850236 + R1_DM LINE R1 4936 5356 0 7 601 4480 77 20 3 chrUextra 2154453 2155042 -26849614 + R1_DM LINE R1 1 599 -4757 7 601 2844 231 9 57 chrUextra 2155142 2155918 -26848738 + Gypsy12_LTR LTR Gypsy 34 772 -1564 7 601 712 217 151 20 chrUextra 2155940 2156185 -26848471 + Gypsy12_LTR LTR Gypsy 1042 1318 -1018 7 601 688 46 62 0 chrUextra 2156329 2156459 -26848197 + (TTA)n Simple_repeat Simple_repeat 3 140 0 7 601 5927 65 56 8 chrUextra 2156459 2157328 -26847328 + HMSBEAGLE_I LTR Gypsy 976 1917 -4612 7 601 1910 71 8 8 chrUextra 2157428 2157684 -26846972 + R1_DM LINE R1 54 309 -5047 7 601 6889 28 0 0 chrUextra 2157681 2158471 -26846185 + R1_DM LINE R1 1503 2292 -3064 7 601 9514 145 43 54 chrUextra 2158571 2160324 -26844332 + R1_DM LINE R1 3621 5354 -2 7 601 3152 58 5 5 chrUextra 2160359 2160757 -26843899 + R1_DM LINE R1 1 398 -4958 7 601 2925 91 0 2 chrUextra 2160857 2161253 -26843403 - Jockey2 LINE Jockey -1615 1813 1419 7 601 793 142 30 61 chrUextra 2161468 2161633 -26843023 - Gypsy5_LTR LTR Gypsy -194 236 77 7 601 627 73 0 0 chrUextra 2161637 2161719 -26842937 - Jockey2 LINE Jockey -3346 82 1 7 601 3065 176 16 0 chrUextra 2162000 2162552 -26842104 - HETA LINE telomeric -4179 1902 1342 7 601 2842 138 8 16 chrUextra 2162552 2163037 -26841619 - TAHRE LINE telomeric -9 10454 9974 7 601 3789 53 62 0 chrUextra 2163142 2163630 -26841026 - PROTOP DNA P -3962 518 1 7 601 3611 112 71 2 chrUextra 2163630 2164184 -26840472 + Invader1_I LTR Gypsy 1899 2491 -695 7 601 1825 79 0 12 chrUextra 2164284 2164529 -26840127 - DMCR1A LINE CR1 -3033 1437 1196 7 601 3945 199 21 21 chrUextra 2165446 2166467 -26838189 - SAR_DM Satellite Satellite -396 1076 57 7 601 708 221 0 7 chrUextra 2166568 2166718 -26837938 - Gypsy2_I LTR Gypsy -900 5235 5087 7 601 274 301 30 30 chrUextra 2166833 2166972 -26837684 - G2_DM LINE Jockey -2720 382 281 7 601 5629 32 0 0 chrUextra 2167710 2168359 -26836297 + DMRT1B LINE R1 3223 3871 -1312 7 601 3280 38 2 0 chrUextra 2168356 2168752 -26835904 + DMRT1B LINE R1 4436 4832 -351 7 601 6810 11 7 0 chrUextra 2168852 2169605 -26835051 + STALKER4_I LTR Gypsy 3540 4297 -2233 7 601 2565 27 0 0 chrUextra 2169602 2169894 -26834762 + STALKER4_I LTR Gypsy 4410 4701 -1829 7 601 5271 16 0 3 chrUextra 2169994 2170615 -26834041 - Invader2_I LTR Gypsy -211 4381 3763 7 601 3241 43 43 0 chrUextra 2170613 2171036 -26833620 - Invader2_I LTR Gypsy -1021 3571 3131 7 601 3740 144 78 38 chrUextra 2171136 2172177 -26832479 + TART_B1 LINE telomeric 967 2701 -7953 7 601 1731 284 16 31 chrUextra 2172290 2172861 -26831795 + FROGGER_I LTR Copia 558 1119 -958 7 601 1005 296 28 28 chrUextra 2172891 2173253 -26831403 + Copia2_I LTR Copia 1616 1977 -2185 7 601 2834 9 0 3 chrUextra 2173418 2173757 -26830899 - Invader2_I LTR Gypsy -4254 338 1 7 601 2491 0 0 0 chrUextra 2173757 2174023 -26830633 - Invader2_LTR LTR Gypsy 0 266 1 7 601 3263 49 16 0 chrUextra 2174034 2174459 -26830197 + MDG1_I LTR Gypsy 1130 1561 -5035 7 601 805 136 0 0 chrUextra 2174561 2174686 -26829970 + ARS406_DM Unknown Unknown 65 189 -164 7 601 4138 189 36 30 chrUextra 2174575 2175598 -26829058 - SAR_DM Satellite Satellite -198 1274 246 7 601 9412 11 2 0 chrUextra 2175700 2176741 -26827915 - DIVER2_I LTR Pao -2754 1393 351 7 601 8270 52 10 1 chrUextra 2176846 2177882 -26826774 + R1_DM LINE R1 300 1344 -4012 7 601 5743 29 8 104 chrUextra 2177982 2179023 -26825633 - TART LINE telomeric -363 14114 12990 7 601 5793 38 66 13 chrUextra 2179123 2179879 -26824777 - ROO_I LTR Pao -3268 4988 4193 7 601 2402 22 4 0 chrUextra 2179886 2180163 -26824493 + FW_DM LINE Jockey 1748 2025 -2667 7 601 412 255 119 94 chrUextra 2180388 2180674 -26823982 + Invader1_LTR LTR Gypsy 84 376 -47 7 601 338 85 689 15 chrUextra 2181169 2181301 -26823355 - HMSBEAGLE_I LTR Gypsy -6308 221 1 7 601 1018 60 6 17 chrUextra 2181405 2182446 -26822210 + RSP Satellite Satellite 1 1029 0 7 601 9198 0 0 1 chrUextra 2182546 2183586 -26821070 - TAHRE LINE telomeric -2020 8443 7405 7 601 2270 181 4 27 chrUextra 2183686 2184173 -26820483 + SAR_DM Satellite Satellite 615 1090 -382 7 601 2184 42 3 30 chrUextra 2184174 2184467 -26820189 - BATUMI_I LTR Pao -677 7286 7002 7 601 1191 60 16 52 chrUextra 2184467 2184659 -26819997 - BATUMI_I LTR Pao 0 7963 7779 7 601 838 18 9 26 chrUextra 2184612 2184726 -26819930 + BATUMI_I LTR Pao 6592 6703 -1260 7 601 4122 29 6 2 chrUextra 2184826 2185317 -26819339 - R1_DM LINE R1 -1560 3796 3304 7 601 3330 35 15 0 chrUextra 2185317 2185723 -26818933 - R1_DM LINE R1 -2310 3046 2635 7 601 1191 45 19 0 chrUextra 2185711 2185866 -26818790 - R1_DM LINE R1 -3004 2352 2195 7 601 2412 191 47 6 chrUextra 2185972 2187005 -26817651 - SAR_DM Satellite Satellite -535 1075 1 7 601 4859 8 0 0 chrUextra 2187106 2187637 -26817019 + QUASIMODO_LTR LTR Gypsy 128 658 0 7 601 3436 70 28 24 chrUextra 2187650 2188146 -26816510 - IDEFIX_I LTR Gypsy -1474 4154 3657 7 601 8880 29 7 0 chrUextra 2188246 2189286 -26815370 - NINJA_I LTR Pao -2647 3364 2318 7 601 21 0 0 0 chrUextra 2189734 2189755 -26814901 + AT_rich Low_complexity Low_complexity 1 21 0 7 601 2633 32 0 22 chrUextra 2189780 2190103 -26814553 + NINJA_LTR LTR Pao 1 316 -1 7 601 2237 49 6 16 chrUextra 2190104 2190415 -26814241 + NINJA_I LTR Pao 1 308 -5703 7 601 8996 2 1 35 chrUextra 2190526 2191566 -26813090 - Invader3_I LTR Gypsy -2607 2281 1277 7 601 2696 132 4 18 chrUextra 2191667 2192121 -26812535 + TAHRE LINE telomeric 10011 10458 -5 7 601 1420 175 74 56 chrUextra 2192132 2192703 -26811953 + HETA LINE telomeric 1 613 -5468 7 601 560 301 53 43 chrUextra 2192805 2193104 -26811552 - HMSBEAGLE_I LTR Gypsy -3638 2891 2590 7 601 477 319 15 5 chrUextra 2193646 2193841 -26810815 - HMSBEAGLE_I LTR Gypsy -4398 2131 1935 7 601 8039 24 12 5 chrUextra 2193944 2194911 -26809745 - DM176_I LTR Gypsy -5446 974 1 7 601 655 0 0 0 chrUextra 2194911 2194983 -26809673 - DM176_LTR LTR Gypsy 0 507 436 7 601 5983 29 40 0 chrUextra 2195083 2196122 -26808534 - R1_DM LINE R1 -1561 3795 2716 7 601 3174 164 339 17 chrUextra 2196222 2197256 -26807400 - TART LINE telomeric -4899 9578 8213 7 601 5660 99 31 65 chrUextra 2197361 2198373 -26806283 + PROTOP_B DNA P 177 1153 0 7 601 2641 113 26 22 chrUextra 2198500 2199539 -26805117 + DMSAT6 Satellite Satellite 1 1043 -82 7 601 1478 63 380 0 chrUextra 2199639 2199873 -26804783 - DMCR1A LINE CR1 -2036 2434 2112 7 601 6165 51 45 25 chrUextra 2199870 2200677 -26803979 - DMCR1A LINE CR1 -2461 2009 1187 7 601 250 24 0 180 chrUextra 2200778 2200828 -26803828 - Gypsy7_I LTR Gypsy -4943 41 1 7 601 1896 76 0 12 chrUextra 2200828 2201081 -26803575 - Gypsy7_LTR LTR Gypsy 0 251 2 7 601 936 28 0 0 chrUextra 2201081 2201187 -26803469 - Gypsy7_I LTR Gypsy 0 4984 4879 7 601 778 79 0 45 chrUextra 2201282 2201414 -26803242 - Gypsy7_I LTR Gypsy -109 4875 4750 7 601 2965 70 71 5 chrUextra 2201393 2201816 -26802840 - Gypsy7_I LTR Gypsy -1411 4449 3999 7 601 1500 246 106 75 chrUextra 2202024 2202654 -26802002 + TIRANT_I LTR Gypsy 755 1398 -6294 7 601 718 191 0 0 chrUextra 2202820 2202946 -26801710 + TIRANT_I LTR Gypsy 1394 1519 -6173 7 601 1130 16 0 8 chrUextra 2203056 2203186 -26801470 + Invader2_LTR LTR Gypsy 138 266 0 7 601 3089 24 0 0 chrUextra 2203186 2203561 -26801095 + Invader2_I LTR Gypsy 1 375 -4217 7 601 4885 4 0 0 chrUextra 2203559 2204095 -26800561 + Invader2_I LTR Gypsy 623 1158 -3434 7 601 5135 32 121 1 chrUextra 2204573 2205233 -26799423 + PROTOP_B DNA P 1 736 -417 7 601 521 111 0 0 chrUextra 2205333 2205405 -26799251 + ARS406_DM Unknown Unknown 118 189 -164 7 601 4180 190 23 34 chrUextra 2205342 2206366 -26798290 - SAR_DM Satellite Satellite -242 1230 218 7 601 5833 10 64 0 chrUextra 2206471 2207175 -26797481 + STALKER4_I LTR Gypsy 3260 4008 -2522 7 601 2919 9 3 0 chrUextra 2207179 2207509 -26797147 + STALKER4_I LTR Gypsy 4593 4923 -1607 7 601 27 29 0 0 chrUextra 2207803 2207837 -26796819 + AT_rich Low_complexity Low_complexity 1 34 0 7 601 23 50 0 48 chrUextra 2208361 2208424 -26796232 + AT_rich Low_complexity Low_complexity 1 60 0 7 601 9409 12 3 1 chrUextra 2208747 2209785 -26794871 - R2_DM LINE R2 -502 3105 2066 7 601 8289 24 77 0 chrUextra 2209885 2210923 -26793733 + R1_DM LINE R1 3865 4982 -374 7 601 1174 137 30 22 chrUextra 2211069 2211300 -26793356 + NTS_DM Other Other 8 240 0 7 601 239 167 21 0 chrUextra 2211300 2211348 -26793308 + NTS_DM Other Other 1 49 -191 7 601 268 171 45 68 chrUextra 2211351 2211439 -26793217 + NTS_DM Other Other 155 240 0 7 601 1015 130 67 10 chrUextra 2211439 2211633 -26793023 + NTS_DM Other Other 1 205 -35 7 601 296 125 21 0 chrUextra 2211664 2211712 -26792944 + NTS_DM Other Other 1 49 -191 7 601 1101 142 35 22 chrUextra 2211810 2212040 -26792616 + NTS_DM Other Other 8 240 0 7 601 6672 4 0 0 chrUextra 2212161 2212909 -26791747 - DM176_I LTR Gypsy -1376 5044 4297 7 601 2675 3 0 0 chrUextra 2212907 2213199 -26791457 - DM176_I LTR Gypsy -2741 3679 3388 7 601 2906 12 0 0 chrUextra 2213299 2213618 -26791038 - PROTOP DNA P -3 4477 4159 7 601 5257 30 95 6 chrUextra 2213629 2214337 -26790319 - PROTOP DNA P -3394 1086 316 7 601 244 269 25 13 chrUextra 2214438 2214517 -26790139 - Invader4_I LTR Gypsy -551 1862 1783 7 601 676 351 33 41 chrUextra 2214933 2215474 -26789182 - Invader6_I LTR Gypsy -1504 2595 2059 7 601 467 55 0 0 chrUextra 2216711 2216766 -26787890 - R1_DM LINE R1 -4055 1301 1247 7 601 4767 64 3 3 chrUextra 2216768 2217379 -26787277 - R1_DM LINE R1 -4745 611 1 7 601 1004 35 0 0 chrUextra 2217412 2217526 -26787130 - R1_DM LINE R1 0 5356 5243 7 601 1958 9 4 4 chrUextra 2217523 2217748 -26786908 - R1_DM LINE R1 -290 5066 4842 7 601 864 20 0 10 chrUextra 2217848 2217948 -26786708 - PROTOP DNA P -4382 98 1 7 601 880 291 88 32 chrUextra 2218261 2218787 -26785869 - TV1I LTR Gypsy -5127 933 379 7 601 9140 17 15 0 chrUextra 2218985 2220022 -26784634 + ROO_I LTR Pao 1504 2556 -5700 7 601 2593 101 22 16 chrUextra 2220138 2221136 -26783520 - DMSAT6 Satellite Satellite 0 1004 1 7 601 332 137 173 27 chrUextra 2221262 2221337 -26783319 - Gypsy8_I LTR Gypsy -3330 1017 932 7 601 1492 88 15 0 chrUextra 2221326 2221530 -26783126 - Gypsy8_I LTR Gypsy -3867 480 274 7 601 2423 88 8 53 chrUextra 2221498 2222296 -26782360 + DMSAT6 Satellite Satellite 1 761 -44 7 601 282 24 0 0 chrUextra 2222396 2222437 -26782219 - QUASIMODO_I LTR Gypsy -996 5064 5024 7 601 1772 0 5 0 chrUextra 2222437 2222634 -26782022 - Copia2_LTR_DM LTR Copia 0 198 1 7 601 2162 16 0 0 chrUextra 2222634 2222892 -26781764 - Copia2_I LTR Copia 0 4162 3905 7 601 4888 13 6 2 chrUextra 2222884 2223432 -26781224 - Copia2_I LTR Copia -1572 2590 2041 7 601 3245 41 115 0 chrUextra 2223979 2224567 -26780089 + PROTOP_B DNA P 1 653 -500 7 601 881 144 118 0 chrUextra 2225093 2225246 -26779410 + DMRT1B LINE R1 4815 4985 -198 7 601 675 130 28 0 chrUextra 2225370 2225478 -26779178 + DMRT1B LINE R1 5055 5165 -18 7 601 27 29 0 0 chrUextra 2226042 2226076 -26778580 + AT_rich Low_complexity Low_complexity 1 34 0 7 601 35 63 0 0 chrUextra 2226601 2226664 -26777992 + AT_rich Low_complexity Low_complexity 1 63 0 7 601 2295 120 5 33 chrUextra 2226940 2227389 -26777267 - DMSAT6 Satellite Satellite -30 440 5 7 601 2410 108 9 41 chrUextra 2227415 2227975 -26776681 - DMSAT6 Satellite Satellite -3 541 1 7 75 2542 83 21 43 chrUextra 2228076 2228607 -26776049 + DMSAT6 Satellite Satellite 1 518 -130 7 602 2350 107 17 38 chrUextra 2228628 2229104 -26775552 + DMSAT6 Satellite Satellite 5 470 0 7 602 4801 4 2 0 chrUextra 2229212 2229733 -26774923 + Gypsy6_I LTR Gypsy 6489 7010 -2 7 602 3720 17 0 0 chrUextra 2229736 2230143 -26774513 + Gypsy6_LTR LTR Gypsy 1 407 0 7 602 956 0 9 0 chrUextra 2230143 2230248 -26774408 + SSU-rRNA_Dme rRNA rRNA 1822 1927 -68 7 602 2021 79 4 0 chrUextra 2230516 2230781 -26773875 + Baggins1 LINE LOA 4762 5027 -426 7 602 30 27 0 0 chrUextra 2231840 2231877 -26772779 + AT_rich Low_complexity Low_complexity 1 37 0 7 602 1965 189 192 38 chrUextra 2231887 2232518 -26772138 - HETA LINE telomeric -171 5910 5183 7 602 2763 68 13 35 chrUextra 2232620 2233015 -26771641 - Gypsy10_I LTR Gypsy -4892 386 1 7 602 1458 85 15 5 chrUextra 2233015 2233215 -26771441 - Gypsy10_LTR LTR Gypsy 0 364 163 7 602 23 54 0 0 chrUextra 2233756 2233793 -26770863 + AT_rich Low_complexity Low_complexity 1 37 0 7 602 21 0 0 0 chrUextra 2234201 2234222 -26770434 + AT_rich Low_complexity Low_complexity 1 21 0 7 602 42 57 0 0 chrUextra 2234361 2234431 -26770225 + AT_rich Low_complexity Low_complexity 1 70 0 7 602 395 153 203 79 chrUextra 2234549 2234726 -26769930 + DNAREP1_DM LINE Penelope 16 214 -380 7 602 391 167 39 0 chrUextra 2234710 2234788 -26769868 - DNAREP1_DM LINE Penelope -377 217 137 7 602 5891 0 0 0 chrUextra 2234891 2235522 -26769134 - DOC LINE Jockey -4065 660 30 7 602 3743 5 0 0 chrUextra 2235519 2235926 -26768730 - LSU-rRNA_Dme rRNA rRNA -1352 2548 2142 7 602 4415 12 0 0 chrUextra 2236026 2236516 -26768140 - R1_DM LINE R1 -3247 2109 1620 7 602 821 84 0 0 chrUextra 2236516 2236623 -26768033 - R1_DM LINE R1 -4515 841 735 7 602 3501 53 2 5 chrUextra 2236622 2237061 -26767595 - R1_DM LINE R1 -4745 611 174 7 602 3833 29 0 7 chrUextra 2237161 2237618 -26767038 - STALKER4_I LTR Gypsy -1443 5087 4634 7 602 2173 38 98 27 chrUextra 2237618 2237913 -26766743 - NINJA_LTR LTR Pao -1 316 1 7 602 2458 21 0 0 chrUextra 2237913 2238196 -26766460 - NINJA_I LTR Pao 0 6011 5729 7 602 983 125 113 5 chrUextra 2238525 2238710 -26765946 + DNAREP1_DM LINE Penelope 1 205 -389 7 602 23 0 0 0 chrUextra 2238768 2238791 -26765865 + AT_rich Low_complexity Low_complexity 1 23 0 7 602 2435 101 3 6 chrUextra 2238951 2239299 -26765357 - Gypsy12A_LTR LTR Gypsy 0 2280 1934 7 602 2733 212 55 12 chrUextra 2239431 2240465 -26764191 - SAR_DM Satellite Satellite -1054 1078 1 7 602 9411 1 13 0 chrUextra 2240566 2241601 -26763055 - G2_DM LINE Jockey -8 3094 2047 7 602 4838 9 0 0 chrUextra 2241701 2242237 -26762419 + FW_DM LINE Jockey 4155 4690 -2 7 602 4322 22 0 0 chrUextra 2242236 2242736 -26761920 - STALKER4_I LTR Gypsy -3765 2765 2266 7 602 9011 19 2 1 chrUextra 2242836 2243870 -26760786 - Gypsy4_I LTR Gypsy -1067 5221 4187 7 602 1571 0 0 0 chrUextra 2243970 2244140 -26760516 + Copia_I LTR Copia 4424 4593 0 7 602 2368 7 4 0 chrUextra 2244140 2244415 -26760241 + Copia_LTR LTR Copia 1 276 0 7 602 245 0 0 0 chrUextra 2244415 2244449 -26760207 + Copia_LTR LTR Copia 243 276 0 7 602 2192 195 75 35 chrUextra 2244449 2244997 -26759659 + Stalker2_I LTR Gypsy 5079 5649 -1753 7 602 916 97 5 19 chrUextra 2245173 2245759 -26758897 + RSP Satellite Satellite 1 578 0 7 602 897 81 0 14 chrUextra 2245798 2246079 -26758577 + RSP Satellite Satellite 1 277 -1 7 602 26 30 0 0 chrUextra 2246626 2246659 -26757997 + AT_rich Low_complexity Low_complexity 1 33 0 7 602 21 89 0 0 chrUextra 2246796 2246852 -26757804 + AT_rich Low_complexity Low_complexity 1 56 0 7 602 2678 204 54 10 chrUextra 2247372 2248405 -26756251 - SAR_DM Satellite Satellite -641 1078 1 7 602 5479 200 6 0 chrUextra 2248506 2249538 -26755118 + ROVER-I_DM LTR Gypsy 2729 3766 -2818 7 602 3642 185 32 59 chrUextra 2249654 2250624 -26754032 + SAR_DM Satellite Satellite 326 1269 -203 7 602 1094 66 13 0 chrUextra 2250521 2250672 -26753984 - ARS406_DM Unknown Unknown -164 189 37 7 602 5437 10 0 0 chrUextra 2250772 2251396 -26753260 - STALKER4_I LTR Gypsy -3182 3348 2725 7 602 1114 108 9 106 chrUextra 2251395 2251622 -26753034 + DIVER_LTR LTR Pao 20 224 0 7 602 1133 47 6 75 chrUextra 2251643 2251804 -26752852 + DIVER_I LTR Pao 1 150 -5493 7 602 5970 52 19 66 chrUextra 2251933 2252871 -26751785 + BATUMI_I LTR Pao 603 1496 -6467 7 602 614 0 0 0 chrUextra 2252868 2252938 -26751718 + G6_DM LINE Jockey 1855 1924 -118 7 602 2457 73 0 0 chrUextra 2253488 2253804 -26750852 - PROTOP DNA P -1549 2931 2616 7 602 458 125 0 0 chrUextra 2254007 2254071 -26750585 - ACCORD2_LTR LTR Gypsy 0 215 152 7 602 34 24 0 0 chrUextra 2255039 2255080 -26749576 + AT_rich Low_complexity Low_complexity 1 41 0 7 602 581 115 80 0 chrUextra 2255091 2255204 -26749452 - TART LINE telomeric -3986 10491 10370 7 602 26 0 0 0 chrUextra 2255412 2255438 -26749218 + AT_rich Low_complexity Low_complexity 1 26 0 7 602 1454 98 32 14 chrUextra 2255438 2255655 -26749001 - PROTOP DNA P -4258 222 1 7 602 5552 49 10 3 chrUextra 2255655 2256336 -26748320 - DOC3_DM LINE Jockey -1072 3668 2983 7 602 9440 14 0 0 chrUextra 2256437 2257470 -26747186 - R2_DM LINE R2 -979 2628 1596 7 602 922 179 46 7 chrUextra 2257731 2257960 -26746696 + DOC4_DM LINE Jockey 1735 2056 -2636 7 602 384 246 65 34 chrUextra 2257960 2258180 -26746476 + FW3_DM LINE Jockey 1526 1622 -1510 7 602 324 295 75 66 chrUextra 2258217 2258602 -26746054 + DOC4_DM LINE Jockey 2886 3329 -1411 7 602 3425 24 86 2 chrUextra 2258703 2259287 -26745369 - Gypsy2_I LTR Gypsy -1302 4833 4201 7 602 928 286 65 28 chrUextra 2259250 2259735 -26744921 + DM412 LTR Gypsy 2708 3271 -3626 7 602 7180 81 29 13 chrUextra 2259835 2260867 -26743789 + QUASIMODO_I LTR Gypsy 275 1323 -4737 7 602 8830 25 12 0 chrUextra 2260986 2261999 -26742657 - R1_DM LINE R1 -2588 2768 1744 7 602 3932 196 19 31 chrUextra 2262099 2263130 -26741526 + SAR_DM Satellite Satellite 1 1018 -203 7 602 2940 26 0 11 chrUextra 2263231 2263583 -26741073 - BATUMI_I LTR Pao -4707 3256 2909 7 602 5380 39 26 18 chrUextra 2263581 2264263 -26740393 - BATUMI_I LTR Pao -5715 2248 1561 7 602 523 28 14 0 chrUextra 2265495 2265566 -26739090 - G2_DM LINE Jockey -31 3071 3000 7 602 3424 42 12 5 chrUextra 2265562 2265994 -26738662 - G2_DM LINE Jockey -211 2891 2457 7 602 4396 45 21 0 chrUextra 2265993 2266525 -26738131 - G2_DM LINE Jockey -1090 2012 1470 7 602 7804 92 13 1 chrUextra 2266626 2267657 -26736999 - Gypsy12_I LTR Gypsy -737 4809 3767 7 602 715 324 26 26 chrUextra 2268353 2268695 -26735961 + DIVER2_I LTR Pao 3018 3359 -788 7 602 2172 35 27 4 chrUextra 2268888 2269147 -26735509 + DOC3_DM LINE Jockey 2283 2547 -2193 7 602 1639 35 211 4 chrUextra 2269149 2269377 -26735279 + DOC3_DM LINE Jockey 2667 2941 -1799 7 602 4758 27 6 0 chrUextra 2269371 2269919 -26734737 + DOC3_DM LINE Jockey 3298 3848 -892 7 602 1809 0 0 0 chrUextra 2270031 2270229 -26734427 + Copia2_LTR_DM LTR Copia 1 198 0 7 602 1041 80 33 0 chrUextra 2270229 2270379 -26734277 + QUASIMODO_I LTR Gypsy 5024 5178 -882 7 602 592 59 47 0 chrUextra 2270377 2270462 -26734194 + QUASIMODO_I LTR Gypsy 5479 5567 -493 7 602 5437 10 0 2 chrUextra 2270456 2271050 -26733606 + Copia2_I LTR Copia 1710 2302 -1860 7 602 617 148 40 16 chrUextra 2271155 2271279 -26733377 - DMTOM1_LTR LTR Gypsy 0 410 284 7 602 279 191 59 0 chrUextra 2271296 2271364 -26733292 - DM176_LTR LTR Gypsy -141 366 295 7 602 257 228 11 151 chrUextra 2271472 2271565 -26733091 - DM176_LTR LTR Gypsy -238 269 190 7 602 842 130 36 0 chrUextra 2271621 2271759 -26732897 - DM176_I LTR Gypsy 0 6420 6278 7 602 1129 146 0 0 chrUextra 2271758 2271950 -26732706 - DM297_I LTR Gypsy -486 5681 5490 7 602 1090 164 0 4 chrUextra 2271948 2272175 -26732481 - DM297_I LTR Gypsy -1433 4734 4509 7 602 2622 24 9 0 chrUextra 2272699 2273028 -26731628 - TC1-2_DM DNA Tc1 0 1644 1313 7 602 9048 8 0 10 chrUextra 2273412 2274443 -26730213 + DMRT1B LINE R1 871 1891 -3292 7 602 5942 21 8 1 chrUextra 2274543 2275574 -26729082 - Copia_I LTR Copia -1647 2946 1809 7 602 227 0 0 0 chrUextra 2275674 2275701 -26728955 + Copia2_I LTR Copia 4136 4162 0 7 602 1781 5 0 0 chrUextra 2275701 2275899 -26728757 + Copia2_LTR_DM LTR Copia 1 198 0 7 602 1473 17 0 0 chrUextra 2275899 2276071 -26728585 + (TTA)n Simple_repeat Simple_repeat 2 173 0 7 602 5672 111 10 22 chrUextra 2276805 2277835 -26726821 + Gypsy12_I LTR Gypsy 358 1432 -4114 7 602 25 51 0 0 chrUextra 2278390 2278429 -26726227 + AT_rich Low_complexity Low_complexity 1 39 0 7 602 1094 139 64 5 chrUextra 2278470 2278673 -26725983 - DNAREP1_DM LINE Penelope -358 236 22 7 602 2608 88 5 31 chrUextra 2279065 2279489 -26725167 - HETA LINE telomeric -3791 2290 1878 7 602 252 100 0 0 chrUextra 2279487 2279527 -26725129 - HETA LINE telomeric -5220 861 822 7 602 1512 185 18 80 chrUextra 2279525 2280037 -26724619 - TAHRE LINE telomeric -9966 497 18 7 602 569 312 17 61 chrUextra 2280229 2280526 -26724130 - Gypsy8_I LTR Gypsy -1905 2442 2159 7 602 547 330 18 7 chrUextra 2280801 2281082 -26723574 - OSVALDO_I LTR Gypsy -5862 791 508 7 602 736 36 143 0 chrUextra 2281327 2281439 -26723217 + DNAREP1_DM LINE Penelope 467 594 0 7 602 30 0 0 0 chrUextra 2281695 2281725 -26722931 + AT_rich Low_complexity Low_complexity 1 30 0 7 602 3294 42 2 18 chrUextra 2282455 2282897 -26721759 - DOC3_DM LINE Jockey -4137 603 169 7 602 8042 30 6 3 chrUextra 2283585 2284615 -26720041 - STALKER4_I LTR Gypsy -816 5714 4682 7 602 4792 41 26 3 chrUextra 2284724 2285745 -26718911 - TART LINE telomeric -5566 8911 8328 7 602 729 192 85 96 chrUextra 2285845 2286138 -26718518 + TIRANT_LTR LTR Gypsy 20 309 -108 7 602 528 218 16 8 chrUextra 2287061 2287186 -26717470 + Gypsy_I LTR Gypsy 6094 6219 -288 7 602 975 207 112 37 chrUextra 2287188 2287564 -26717092 + Gypsy_LTR LTR Gypsy 33 436 -46 7 602 229 220 0 0 chrUextra 2287717 2287776 -26716880 + TIRANT_I LTR Gypsy 6974 7032 -660 7 602 3496 187 21 26 chrUextra 2288113 2289135 -26715521 - SAR_DM Satellite Satellite -435 1017 1 7 602 667 182 23 52 chrUextra 2289235 2289409 -26715247 - TART LINE telomeric -10091 563 395 7 602 1620 108 241 29 chrUextra 2289380 2289724 -26714932 - TART LINE telomeric -10448 4029 3613 7 602 1459 95 0 28 chrUextra 2289728 2289977 -26714679 - TART LINE telomeric -6448 8029 7788 7 602 3600 200 15 25 chrUextra 2290365 2291395 -26713261 - SAR_DM Satellite Satellite -1035 1019 1 7 602 314 151 0 0 chrUextra 2291495 2291548 -26713108 + Gypsy3_I LTR Gypsy 6125 6177 0 7 602 1950 118 59 57 chrUextra 2291548 2291954 -26712702 + Gypsy6_LTR LTR Gypsy 1 407 0 7 602 529 194 0 59 chrUextra 2292365 2292518 -26712138 - Gypsy8_I LTR Gypsy -4123 224 81 7 602 3822 78 65 4 chrUextra 2292672 2293282 -26711374 + TRANSIB2 DNA Transib 1810 2844 0 7 602 2562 105 0 0 chrUextra 2293283 2293654 -26711002 - DMRT1B LINE R1 -1287 3896 3526 7 602 3045 45 83 9 chrUextra 2294883 2295330 -26709326 + QUASIMODO_I LTR Gypsy 4549 5028 -1032 7 602 1685 5 0 0 chrUextra 2295330 2295528 -26709128 + Copia2_LTR_DM LTR Copia 1 198 0 7 602 3176 13 3 0 chrUextra 2295528 2295912 -26708744 + Copia2_I LTR Copia 1 385 -3777 7 602 3318 22 0 0 chrUextra 2296012 2296413 -26708243 + R1_DM LINE R1 4956 5356 0 7 602 4205 64 49 3 chrUextra 2296446 2297040 -26707616 + R1_DM LINE R1 1 621 -4735 7 602 4073 22 0 0 chrUextra 2297141 2297641 -26707015 + FW_DM LINE Jockey 4193 4692 0 7 602 254 29 0 0 chrUextra 2297652 2297686 -26706970 - R1_DM LINE R1 -3966 1390 1357 7 602 3563 48 43 2 chrUextra 2297686 2298170 -26706486 - R1_DM LINE R1 -4150 1206 703 7 602 195 42 0 0 chrUextra 2298607 2298631 -26706025 + (GAAA)n Simple_repeat Simple_repeat 3 26 0 7 602 189 0 0 0 chrUextra 2298682 2298703 -26705953 + (CCCCCT)n Simple_repeat Simple_repeat 4 24 0 7 602 3944 23 0 0 chrUextra 2300528 2301005 -26703651 - DOC2_DM LINE Jockey -258 4535 4059 7 602 4600 11 2 0 chrUextra 2301012 2301557 -26703099 - DOC2_DM LINE Jockey -1135 3658 3113 7 602 3468 33 0 2 chrUextra 2301672 2302101 -26702555 - ROO_LTR LTR Pao 0 428 1 7 602 26 50 0 0 chrUextra 2302136 2302176 -26702480 + AT_rich Low_complexity Low_complexity 1 40 0 7 602 2452 14 0 0 chrUextra 2302391 2302681 -26701975 - DMRT1A LINE R1 -1051 4132 3843 7 602 270 188 16 0 chrUextra 2302787 2302851 -26701805 + XDMR Unknown Unknown 297 361 0 7 602 3332 177 34 18 chrUextra 2302796 2303813 -26700843 - SAR_DM Satellite Satellite -353 1033 1 7 602 374 307 0 0 chrUextra 2304127 2304254 -26700402 - MICROPIA_I LTR Gypsy -682 3794 3668 7 602 1256 289 54 13 chrUextra 2304301 2304898 -26699758 - MICROPIA_I LTR Gypsy -1159 3317 2697 7 602 728 212 116 99 chrUextra 2305042 2305943 -26698713 - ROVER-I_DM LTR Gypsy -5515 1069 1 7 602 308 79 27 103 chrUextra 2305943 2306018 -26698638 - DMTOM1_LTR LTR Gypsy -7 403 308 7 602 1652 43 14 0 chrUextra 2306169 2306380 -26698276 - CIRCE LINE Composite -3222 3134 2921 7 602 3015 30 11 81 chrUextra 2306379 2306867 -26697789 + ROO_I LTR Pao 182 728 -7528 7 602 327 136 0 0 chrUextra 2306867 2306926 -26697730 + (CAG)n Simple_repeat Simple_repeat 1 59 0 7 602 410 235 36 111 chrUextra 2306926 2306993 -26697663 + ROO_I LTR Pao 729 795 -7461 7 602 484 334 27 27 chrUextra 2307298 2307627 -26697029 - Invader1_I LTR Gypsy -2668 518 190 7 602 265 289 82 0 chrUextra 2307686 2307783 -26696873 - MICROPIA_I LTR Gypsy -4371 105 1 7 602 231 276 12 132 chrUextra 2307890 2308057 -26696599 - ACCORD2_I LTR Gypsy -6540 672 526 7 602 1027 148 0 58 chrUextra 2308102 2308325 -26696331 - TAHRE LINE telomeric -9832 631 422 7 602 7914 7 0 26 chrUextra 2308425 2309453 -26695203 - DM176_I LTR Gypsy -4420 2000 1000 7 602 3724 184 18 20 chrUextra 2309553 2310580 -26694076 + SAR_DM Satellite Satellite 1 1024 -208 7 602 3271 163 36 3 chrUextra 2310681 2311316 -26693340 + HETA LINE telomeric 1773 2428 -3653 7 602 891 133 0 0 chrUextra 2311309 2311459 -26693197 + HETA LINE telomeric 2767 2916 -3165 7 602 1625 76 108 0 chrUextra 2311458 2311709 -26692947 + HETA LINE telomeric 2442 2719 -3362 7 602 4149 6 0 0 chrUextra 2311809 2312289 -26692367 + TABOR_LTR LTR Gypsy 27 506 0 7 602 1272 261 103 2 chrUextra 2312940 2313366 -26691290 + Gypsy3_I LTR Gypsy 2297 2765 -3412 7 602 1832 54 147 7 chrUextra 2313370 2313670 -26690986 + PROTOP DNA P 3133 3474 -1006 7 602 764 98 151 12 chrUextra 2313708 2313874 -26690782 + PROTOP DNA P 3726 3914 -566 7 602 405 156 0 0 chrUextra 2313882 2313959 -26690697 - DNAREP1_DM LINE Penelope -381 213 137 7 602 246 150 0 0 chrUextra 2314085 2314125 -26690531 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 602 246 150 0 0 chrUextra 2314177 2314217 -26690439 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 602 27 29 0 0 chrUextra 2314222 2314256 -26690400 + AT_rich Low_complexity Low_complexity 1 34 0 7 602 1189 39 0 25 chrUextra 2314328 2314464 -26690192 - LSU-rRNA_Dme rRNA rRNA 0 3900 3769 7 602 5436 0 0 2 chrUextra 2314464 2315091 -26689565 + POGO DNA Pogo 1 626 -1495 7 602 903 281 31 31 chrUextra 2315742 2316158 -26688498 - Copia2_I LTR Copia -2263 1899 1392 7 602 4009 99 66 18 chrUextra 2316328 2317338 -26687318 - TART LINE telomeric -6799 7678 7027 7 602 3877 186 15 20 chrUextra 2317452 2318435 -26686221 - SAR_DM Satellite Satellite -300 1172 195 7 602 767 115 0 0 chrUextra 2318342 2318472 -26686184 + ARS406_DM Unknown Unknown 1 130 -223 7 602 7385 51 19 5 chrUextra 2318575 2319599 -26685057 + IDEFIX_I LTR Gypsy 2631 3669 -1959 7 602 3896 63 32 3 chrUextra 2319699 2320726 -26683930 - PROTOP DNA P -29 1076 154 7 602 8649 14 10 0 chrUextra 2320827 2321853 -26682803 + DM1731_I LTR Copia 1077 2112 -1864 7 602 1001 47 0 0 chrUextra 2321953 2322082 -26682574 + CIRCE LINE Composite 4852 4980 -1376 7 602 1682 41 5 5 chrUextra 2322272 2322491 -26682165 - R1_DM LINE R1 -4037 1319 1101 7 602 3107 67 5 7 chrUextra 2322486 2322922 -26681734 - R1_DM LINE R1 -4921 435 1 7 602 441 0 0 0 chrUextra 2324205 2324256 -26680400 - Gypsy4_I LTR Gypsy -6237 51 1 7 602 2439 17 0 0 chrUextra 2324256 2324543 -26680113 - Gypsy4_LTR LTR Gypsy 0 287 1 7 602 3992 73 13 7 chrUextra 2325331 2326357 -26678299 + R1_DM LINE R1 26 1436 -3920 7 602 3650 35 113 4 chrUextra 2326457 2326980 -26677676 + ROOA_I LTR Pao 5961 6540 -309 7 602 805 11 0 0 chrUextra 2326979 2327073 -26677583 + ROOA_I LTR Pao 6749 6842 -7 7 602 465 35 0 0 chrUextra 2327079 2327137 -26677519 + ROOA_LTR LTR Pao 329 386 0 7 602 383 183 17 17 chrUextra 2327180 2327297 -26677359 + DMCR1A LINE CR1 75 191 -4279 7 602 8573 1 31 0 chrUextra 2327583 2328609 -26676047 + DM176_I LTR Gypsy 2459 3516 -2904 7 602 526 56 0 0 chrUextra 2328709 2328781 -26675875 + ARS406_DM Unknown Unknown 118 189 -164 7 602 3746 202 21 17 chrUextra 2328718 2329721 -26674935 - SAR_DM Satellite Satellite -242 1230 224 7 602 452 120 0 0 chrUextra 2329659 2329734 -26674922 + ARS406_DM Unknown Unknown 1 75 -278 7 602 3012 18 34 0 chrUextra 2329834 2330219 -26674437 - IDEFIX_LTR LTR Gypsy -196 398 1 7 602 241 105 0 0 chrUextra 2330187 2330225 -26674431 + BARI1 DNA Tc1 3 40 -1710 7 602 24 0 0 0 chrUextra 2330470 2330494 -26674162 + AT_rich Low_complexity Low_complexity 1 24 0 7 602 414 65 0 16 chrUextra 2330796 2330859 -26673797 - DMRT1B LINE R1 -340 4843 4782 7 602 2510 87 32 21 chrUextra 2332084 2333109 -26671547 - DMSAT6 Satellite Satellite -103 1037 1 7 602 2724 0 0 0 chrUextra 2333209 2333521 -26671135 + NOMAD_LTR LTR Gypsy 207 518 0 7 602 258 0 0 43 chrUextra 2333521 2333567 -26671089 - BATUMI_I LTR Pao -7253 710 667 7 602 3560 52 137 23 chrUextra 2333585 2334234 -26670422 - BATUMI_I LTR Pao -7228 735 13 7 602 1016 169 99 30 chrUextra 2334350 2334613 -26670043 - Gypsy12_LTR LTR Gypsy -892 1444 1164 7 602 412 86 0 0 chrUextra 2334826 2334884 -26669772 - Gypsy12_I LTR Gypsy -3986 1560 1503 7 602 3140 87 0 19 chrUextra 2334891 2335359 -26669297 - Gypsy12_I LTR Gypsy -3992 1554 1096 7 602 3850 112 42 53 chrUextra 2335672 2336475 -26668181 - PROTOP_B DNA P 0 1153 360 7 602 3763 66 0 25 chrUextra 2336583 2337113 -26667543 + CIRCE LINE Composite 2319 2835 -3521 7 602 3799 45 8 2 chrUextra 2337115 2337607 -26667049 + CIRCE LINE Composite 2961 3455 -2901 7 602 2833 192 13 18 chrUextra 2338831 2339855 -26664801 + SAR_DM Satellite Satellite 1 1018 -569 7 602 779 72 24 8 chrUextra 2339992 2340118 -26664538 - STALKER4_I LTR Gypsy -5645 885 758 7 602 1035 173 90 76 chrUextra 2340184 2340540 -26664116 - ROVER-LTR_DM LTR Gypsy 0 367 7 7 602 373 194 87 10 chrUextra 2340758 2340862 -26663794 - DNAREP1_DM LINE Penelope -416 178 67 7 602 51 31 0 0 chrUextra 2342020 2342085 -26662571 + AT_rich Low_complexity Low_complexity 1 65 0 7 602 1063 51 0 0 chrUextra 2342203 2342341 -26662315 + R1_DM LINE R1 4696 4833 -523 7 602 2706 17 64 0 chrUextra 2342341 2342489 -26662167 - Stalker3_LTR LTR Gypsy 0 372 225 7 602 186 43 0 0 chrUextra 2342489 2342512 -26662144 + (CTTAT)n Simple_repeat Simple_repeat 2 24 0 7 602 2706 17 64 0 chrUextra 2342512 2342707 -26661949 - Stalker3_LTR LTR Gypsy -148 224 8 7 602 292 50 0 0 chrUextra 2342713 2342753 -26661903 - STALKER4_I LTR Gypsy 0 6530 6491 7 602 29 0 0 0 chrUextra 2342753 2342782 -26661874 + AT_rich Low_complexity Low_complexity 1 29 0 7 602 189 0 0 0 chrUextra 2342810 2342831 -26661825 + (T)n Simple_repeat Simple_repeat 1 21 0 7 602 3618 202 17 24 chrUextra 2344452 2345475 -26659181 - SAR_DM Satellite Satellite -836 1016 1 7 602 2726 209 112 18 chrUextra 2345612 2346577 -26658079 + SAR_DM Satellite Satellite 201 1256 -216 7 602 730 92 0 0 chrUextra 2346490 2346599 -26658057 - ARS406_DM Unknown Unknown -167 186 78 7 602 4908 38 47 33 chrUextra 2346699 2347418 -26657238 + PROTOP_A DNA P 377 1105 0 7 602 1491 55 14 9 chrUextra 2347825 2348046 -26656610 + G5_DM LINE Jockey 4635 4856 0 7 602 1527 107 4 4 chrUextra 2348045 2348289 -26656367 - BS2 LINE Jockey -4464 257 14 7 602 31 58 0 0 chrUextra 2348494 2348546 -26656110 + AT_rich Low_complexity Low_complexity 1 52 0 7 602 192 40 0 0 chrUextra 2348663 2348688 -26655968 + (TAA)n Simple_repeat Simple_repeat 1 25 0 7 602 8303 23 0 13 chrUextra 2348947 2349971 -26654685 - Gypsy2_I LTR Gypsy -4841 1294 284 7 602 365 114 0 12 chrUextra 2350071 2350151 -26654505 + NTS_DM Other Other 118 196 -44 7 602 1034 143 38 21 chrUextra 2350368 2350604 -26654052 + NTS_DM Other Other 1 240 0 7 602 280 104 21 0 chrUextra 2350604 2350652 -26654004 + NTS_DM Other Other 1 49 -191 7 602 862 109 0 0 chrUextra 2350742 2350879 -26653777 + NTS_DM Other Other 1 137 -103 7 602 357 159 53 38 chrUextra 2350887 2351018 -26653638 + NTS_DM Other Other 108 240 0 7 602 306 83 21 0 chrUextra 2351018 2351066 -26653590 + NTS_DM Other Other 1 49 -191 7 602 3449 202 36 25 chrUextra 2351197 2352217 -26652439 + SAR_DM Satellite Satellite 1 1031 -227 7 602 40 67 0 0 chrUextra 2352840 2352915 -26651741 + AT_rich Low_complexity Low_complexity 1 75 0 7 602 2532 78 21 21 chrUextra 2353450 2353920 -26650736 + DMSAT6 Satellite Satellite 1 470 0 7 602 2148 98 18 67 chrUextra 2353958 2354452 -26650204 + DMSAT6 Satellite Satellite 1 470 0 7 602 26 30 0 0 chrUextra 2354688 2354721 -26649935 + AT_rich Low_complexity Low_complexity 1 33 0 7 602 213 39 0 0 chrUextra 2355035 2355061 -26649595 + (TA)n Simple_repeat Simple_repeat 2 27 0 7 602 737 82 9 0 chrUextra 2355097 2355207 -26649449 + (TA)n Simple_repeat Simple_repeat 2 112 0 7 602 276 231 0 0 chrUextra 2355283 2355361 -26649295 + (TA)n Simple_repeat Simple_repeat 2 79 0 7 602 22 0 0 0 chrUextra 2355456 2355478 -26649178 + AT_rich Low_complexity Low_complexity 1 22 0 7 602 8341 8 30 9 chrUextra 2355686 2356709 -26647947 + Gypsy6_I LTR Gypsy 1272 2316 -4696 7 602 5404 55 110 10 chrUextra 2356809 2357673 -26646983 + TART LINE telomeric 2201 3150 -11327 7 602 758 129 7 0 chrUextra 2357685 2357832 -26646824 + TART LINE telomeric 3295 3442 -11035 7 602 206 228 0 60 chrUextra 2358293 2358377 -26646279 + A-rich Low_complexity Low_complexity 2 80 0 7 602 25 31 0 0 chrUextra 2358502 2358534 -26646122 + AT_rich Low_complexity Low_complexity 1 32 0 7 75 4130 29 2 2 chrUextra 2359054 2359573 -26645083 + NINJA_I LTR Pao 1122 1640 -4371 7 603 743 77 0 0 chrUextra 2359954 2360058 -26644598 + HOBO DNA hAT 23 126 -2890 7 603 3080 21 3 3 chrUextra 2360177 2360561 -26644095 - R1_DM LINE R1 -4150 1206 823 7 603 3294 71 9 4 chrUextra 2360555 2361019 -26643637 - R1_DM LINE R1 -4890 466 1 7 603 1215 14 0 7 chrUextra 2361052 2361198 -26643458 - R1_DM LINE R1 0 5356 5212 7 603 380 171 0 0 chrUextra 2361298 2361387 -26643269 - Gypsy3_I LTR Gypsy -4727 2285 2218 7 603 554 284 264 0 chrUextra 2361471 2361691 -26642965 - Gypsy3_I LTR Gypsy -4593 1584 1307 7 603 501 278 30 0 chrUextra 2361680 2361813 -26642843 - Gypsy6_I LTR Gypsy -5469 1543 1407 7 603 3904 196 12 17 chrUextra 2362420 2363429 -26641227 + SAR_DM Satellite Satellite 253 1256 -216 7 603 816 29 0 0 chrUextra 2363338 2363442 -26641214 - ARS406_DM Unknown Unknown -164 189 86 7 603 5586 66 44 2 chrUextra 2363542 2364383 -26640273 + STALKER4_I LTR Gypsy 2583 3458 -3072 7 603 1084 106 28 0 chrUextra 2364384 2364564 -26640092 + IDEFIX_I LTR Gypsy 437 621 -5007 7 603 1351 134 44 7 chrUextra 2364664 2364935 -26639721 - DMSAT6 Satellite Satellite -181 289 9 7 603 2309 104 27 25 chrUextra 2364949 2365686 -26638970 - DMSAT6 Satellite Satellite 0 738 1 7 603 1189 194 3 3 chrUextra 2365786 2366070 -26638586 - SAR_DM Satellite Satellite -693 779 496 7 603 794 20 0 0 chrUextra 2366075 2366173 -26638483 + ARS406_DM Unknown Unknown 90 187 -166 7 603 1659 179 8 7 chrUextra 2366085 2366808 -26637848 - SAR_DM Satellite Satellite -569 723 1 7 603 221 167 0 0 chrUextra 2366934 2366976 -26637680 + T-rich Low_complexity Low_complexity 1 42 0 7 603 234 91 0 0 chrUextra 2367597 2367630 -26637026 + (CTG)n Simple_repeat Simple_repeat 1 33 0 7 603 2693 134 6 10 chrUextra 2368030 2368511 -26636145 + TAHRE LINE telomeric 9981 10459 -4 7 603 2570 122 32 38 chrUextra 2368498 2369052 -26635604 + TART LINE telomeric 9498 10048 -4429 7 603 1726 37 0 0 chrUextra 2369152 2369369 -26635287 - ROOA_LTR LTR Pao -169 217 1 7 603 547 122 44 0 chrUextra 2369372 2369462 -26635194 - TRANSIB2 DNA Transib -516 2328 2235 7 603 1496 51 139 0 chrUextra 2369488 2369725 -26634931 - TRANSIB2 DNA Transib 0 2844 2575 7 603 3207 58 34 2 chrUextra 2369725 2370173 -26634483 - TRANSIB2 DNA Transib -1372 1472 1011 7 603 3966 35 77 0 chrUextra 2370273 2370794 -26633862 - FW_DM LINE Jockey -4131 561 1 7 603 3663 36 104 2 chrUextra 2370802 2371294 -26633362 + R1_DM LINE R1 1377 1918 -3438 7 603 1131 30 24 0 chrUextra 2371394 2371563 -26633093 - TLD2 Unknown Unknown -45 173 1 7 603 733 322 23 23 chrUextra 2371397 2372019 -26632637 - Gypsy4_I LTR Gypsy -3769 3243 2255 7 603 2977 16 3 3 chrUextra 2372515 2372880 -26631776 + R1_DM LINE R1 3644 4008 -1348 7 603 1395 0 0 0 chrUextra 2372875 2373039 -26631617 + R1_DM LINE R1 4903 5066 -290 7 603 923 44 0 0 chrUextra 2373036 2373150 -26631506 + R1_DM LINE R1 5243 5356 0 7 603 2409 60 6 17 chrUextra 2373183 2373536 -26631120 + R1_DM LINE R1 1 349 -5007 7 603 7809 40 3 4 chrUextra 2373636 2374657 -26629999 - R1_DM LINE R1 -4184 1172 153 7 603 476 272 95 0 chrUextra 2374839 2375008 -26629648 + Gypsy_I LTR Gypsy 1881 2065 -4442 7 603 1365 141 106 16 chrUextra 2375022 2375390 -26629266 + DNAREP1_DM LINE Penelope 1 335 -259 7 603 882 137 54 0 chrUextra 2375392 2375560 -26629096 - DMCR1A LINE CR1 -171 4299 4123 7 603 293 226 275 7 chrUextra 2375582 2375720 -26628936 + Gypsy_I LTR Gypsy 1098 1272 -5235 7 603 3780 188 20 32 chrUextra 2375883 2376897 -26627759 + SAR_DM Satellite Satellite 1 1002 -208 7 603 5836 14 0 0 chrUextra 2377325 2378020 -26626636 - Copia2_I LTR Copia -2248 1914 1220 7 603 4940 7 0 0 chrUextra 2378120 2378697 -26625959 - DOC LINE Jockey -131 4594 4018 7 603 2787 6 0 0 chrUextra 2378699 2379022 -26625634 - DOC LINE Jockey -932 3793 3471 7 603 856 62 0 0 chrUextra 2379028 2379141 -26625515 - DOC4_DM LINE Jockey -940 1851 1739 7 603 2097 142 8 12 chrUextra 2379241 2379692 -26624964 - STALKER4_I LTR Gypsy -5763 767 235 7 603 289 96 0 37 chrUextra 2379881 2379935 -26624721 - STALKER4_I LTR Gypsy -7350 52 1 7 603 330 25 0 0 chrUextra 2379935 2379962 -26624694 - STALKER4_I LTR Gypsy -6503 27 1 7 603 2536 7 0 3 chrUextra 2379962 2380261 -26624395 - STALKER4_LTR LTR Gypsy 0 402 105 7 603 2230 102 18 24 chrUextra 2380361 2381381 -26623275 + DMSAT6 Satellite Satellite 1 1013 -18 7 603 288 58 0 88 chrUextra 2381481 2381538 -26623118 + BATUMI_I LTR Pao 718 769 -7194 7 603 2679 87 112 40 chrUextra 2381579 2382501 -26622155 + BATUMI_I LTR Pao 749 1736 -6227 7 603 4289 17 31 0 chrUextra 2382601 2383141 -26621515 + DMCR1A LINE CR1 3838 4394 -76 7 603 351 336 7 0 chrUextra 2383284 2383433 -26621223 - NOMAD_I LTR Gypsy -1528 5044 4895 7 603 346 325 6 6 chrUextra 2383462 2383620 -26621036 - NOMAD_I LTR Gypsy -1770 4802 4645 7 603 6794 39 9 72 chrUextra 2383721 2384741 -26619915 - BATUMI_I LTR Pao -6161 1802 847 7 603 4177 68 24 8 chrUextra 2384841 2385462 -26619194 - TRANSIB4 DNA Transib -1910 700 70 7 603 312 211 0 0 chrUextra 2385534 2385610 -26619046 - Gypsy_I LTR Gypsy -3 6504 6429 7 603 554 159 86 16 chrUextra 2385643 2385771 -26618885 + DNAREP1_DM LINE Penelope 432 568 -26 7 603 7659 25 4 28 chrUextra 2385961 2386980 -26617676 + Gypsy12_LTR LTR Gypsy 1321 2315 -21 7 603 4443 13 93 0 chrUextra 2387082 2388099 -26616557 - DOC2_DM LINE Jockey -946 3847 2736 7 603 9476 0 0 0 chrUextra 2388199 2389218 -26615438 + Gypsy2_I LTR Gypsy 3576 4594 -1541 7 603 7776 8 6 0 chrUextra 2389318 2390167 -26614489 - LSU-rRNA_Dme rRNA rRNA -407 3493 2640 7 603 1489 35 0 0 chrUextra 2390165 2390337 -26614319 - R1_DM LINE R1 0 5356 5185 7 603 2698 22 31 0 chrUextra 2390437 2390754 -26613902 - FW_DM LINE Jockey -3518 1174 848 7 603 3163 38 0 0 chrUextra 2390753 2391122 -26613534 - FW_DM LINE Jockey -4323 369 1 7 603 394 274 8 16 chrUextra 2391300 2391426 -26613230 - DIVER2_I LTR Pao -1784 2363 2239 7 603 1879 291 34 37 chrUextra 2391556 2392571 -26612085 - SAR_DM Satellite Satellite -219 1253 243 7 603 3490 5 0 0 chrUextra 2392675 2393052 -26611604 - DOC LINE Jockey -4347 378 2 7 603 23 0 0 0 chrUextra 2393134 2393157 -26611499 + AT_rich Low_complexity Low_complexity 1 23 0 7 603 236 331 47 52 chrUextra 2393231 2393639 -26611017 + BLOOD_I LTR Gypsy 1456 1861 -4752 7 603 4300 189 17 22 chrUextra 2393794 2394801 -26609855 + SAR_DM Satellite Satellite 246 1247 -225 7 603 689 76 11 0 chrUextra 2394721 2394813 -26609843 - ARS406_DM Unknown Unknown -164 189 97 7 603 2448 149 62 22 chrUextra 2394930 2395648 -26609008 - Stalker2_I LTR Gypsy -5525 1005 144 7 603 1210 91 3 34 chrUextra 2395732 2395932 -26608724 - STALKER4_LTR LTR Gypsy -3 399 240 7 603 1237 269 127 25 chrUextra 2396254 2397051 -26607605 - MICROPIA_I LTR Gypsy -682 3794 2917 7 603 3475 167 20 16 chrUextra 2397151 2398168 -26606488 + SAR_DM Satellite Satellite 1 1021 -378 7 603 1346 0 0 0 chrUextra 2398269 2398413 -26606243 - BEL_I LTR Pao -5260 144 1 7 603 3383 0 0 0 chrUextra 2398413 2398774 -26605882 - BEL_LTR LTR Pao 0 361 1 7 603 4574 10 2 2 chrUextra 2398774 2399287 -26605369 + PROTOP DNA P 979 1491 -2989 7 603 7731 51 33 12 chrUextra 2399387 2400405 -26604251 - R1_DM LINE R1 -4312 1044 5 7 603 257 191 63 0 chrUextra 2400507 2400570 -26604086 - DM176_LTR LTR Gypsy -146 361 295 7 603 267 215 11 151 chrUextra 2400679 2400772 -26603884 - DM176_LTR LTR Gypsy -238 269 190 7 603 26 30 0 0 chrUextra 2401156 2401189 -26603467 + AT_rich Low_complexity Low_complexity 1 33 0 7 603 349 107 18 0 chrUextra 2401453 2401509 -26603147 - DNAREP1_DM LINE Penelope 0 594 538 7 603 2178 75 20 72 chrUextra 2401624 2402111 -26602545 - DMSAT6 Satellite Satellite -4 466 5 7 603 2434 84 0 43 chrUextra 2402125 2402609 -26602047 - DMSAT6 Satellite Satellite -3 467 5 7 603 6926 98 31 11 chrUextra 2402741 2403759 -26600897 + HETA LINE telomeric 1918 2956 -3125 7 603 4045 194 25 21 chrUextra 2403870 2404877 -26599779 - SAR_DM Satellite Satellite -396 1076 66 7 603 3200 8 0 0 chrUextra 2404979 2405338 -26599318 - STALKER4_I LTR Gypsy -1008 5522 5164 7 603 2648 164 9 8 chrUextra 2405329 2405988 -26598668 + BATUMI_I LTR Pao 4002 4738 -3176 7 603 3074 272 34 13 chrUextra 2406096 2407096 -26597560 - G6_DM LINE Jockey -756 1286 266 7 603 5070 134 56 9 chrUextra 2407211 2408228 -26596428 - TART_B1 LINE telomeric -7977 2677 1203 7 603 7543 63 14 3 chrUextra 2408328 2409330 -26595326 + PROTOP_B DNA P 125 1137 -16 7 603 4962 227 3 3 chrUextra 2409446 2410462 -26594194 + Gypsy6_I LTR Gypsy 4263 5278 -1734 7 603 5499 166 81 3 chrUextra 2410563 2411579 -26593077 + HETA LINE telomeric 1366 2460 -3621 7 603 589 240 35 35 chrUextra 2411680 2411879 -26592777 + Gypsy12_LTR LTR Gypsy 951 1149 -1187 7 603 3238 166 39 42 chrUextra 2411888 2412574 -26592082 + Gypsy12_LTR LTR Gypsy 1653 2336 0 7 603 750 60 33 41 chrUextra 2412574 2412695 -26591961 + Gypsy12_I LTR Gypsy 1 120 -5426 7 603 8527 27 25 3 chrUextra 2413913 2414930 -26589726 - IDEFIX_I LTR Gypsy -2271 3357 2319 7 603 3672 196 45 24 chrUextra 2415030 2416044 -26588612 + SAR_DM Satellite Satellite 1 1035 -216 7 603 8459 23 3 3 chrUextra 2416164 2417163 -26587493 - ROO_I LTR Pao 0 8256 7258 7 603 6805 15 48 1 chrUextra 2417263 2418279 -26586377 + TART LINE telomeric 8037 8943 -5534 7 603 47 0 0 0 chrUextra 2418533 2418580 -26586076 + AT_rich Low_complexity Low_complexity 1 47 0 7 603 1926 15 0 65 chrUextra 2418596 2418875 -26585781 - Gypsy4_I LTR Gypsy -5911 377 117 7 603 2269 46 7 37 chrUextra 2418891 2419187 -26585469 - Gypsy4_LTR LTR Gypsy 0 287 1 7 603 706 81 10 0 chrUextra 2419296 2419395 -26585261 + HOBO DNA hAT 23 122 -2894 7 603 2484 61 2 58 chrUextra 2419495 2419891 -26584765 + ROO_I LTR Pao 807 1592 -6664 7 603 5255 35 0 0 chrUextra 2419890 2420511 -26584145 + ROO_I LTR Pao 1850 2470 -5786 7 603 1360 40 0 137 chrUextra 2420623 2420857 -26583799 + Gypsy8_I LTR Gypsy 1332 1533 -2814 7 603 382 123 62 0 chrUextra 2420858 2420923 -26583733 - I_DM LINE I -6057 174 106 7 603 35 71 0 0 chrUextra 2420930 2421000 -26583656 + AT_rich Low_complexity Low_complexity 1 70 0 7 603 1541 75 9 27 chrUextra 2421000 2421220 -26583436 - DMCR1A LINE CR1 0 4470 4255 7 603 1518 66 0 10 chrUextra 2421215 2421414 -26583242 - DMCR1A LINE CR1 -2868 1602 1406 7 603 1684 55 18 0 chrUextra 2421407 2421627 -26583029 - FB4_DM DNA Tc1 -3865 224 1 7 603 2607 91 17 30 chrUextra 2421727 2422743 -26581913 + DMSAT6 Satellite Satellite 1 1001 -69 7 603 6708 4 0 0 chrUextra 2422844 2423566 -26581090 + LSU-rRNA_Dme rRNA rRNA 1856 2577 -1323 7 603 2399 4 0 4 chrUextra 2423597 2423859 -26580797 + R2_DM LINE R2 1 261 -3346 7 603 25 0 0 0 chrUextra 2423973 2423998 -26580658 + AT_rich Low_complexity Low_complexity 1 25 0 7 603 5300 142 13 33 chrUextra 2425075 2426091 -26578565 + Gypsy3_I LTR Gypsy 1513 2791 -4221 7 603 200 0 100 0 chrUextra 2426426 2426466 -26578190 + (TA)n Simple_repeat Simple_repeat 1 44 0 7 603 228 78 78 0 chrUextra 2426812 2426863 -26577793 + (TA)n Simple_repeat Simple_repeat 1 55 0 7 603 226 382 0 0 chrUextra 2426966 2427076 -26577580 - DIVER2_I LTR Pao -158 3989 3880 7 603 4494 21 104 0 chrUextra 2427307 2428323 -26576333 + NINJA_I LTR Pao 4009 5130 -881 7 603 5479 14 0 5 chrUextra 2428423 2429054 -26575602 + MDG3_I LTR Gypsy 2348 2975 -2011 7 603 1277 0 0 0 chrUextra 2429024 2429164 -26575492 + MDG3_I LTR Gypsy 4847 4986 0 7 603 2452 4 0 0 chrUextra 2429164 2429431 -26575225 + MDG3_LTR LTR Gypsy 1 267 0 7 603 356 57 0 70 chrUextra 2429544 2429601 -26575055 - DNAREP1_DM LINE Penelope -34 560 508 7 603 7141 57 48 8 chrUextra 2429607 2430554 -26574102 - DMCR1A LINE CR1 0 4470 3487 7 603 1595 187 0 19 chrUextra 2430654 2430976 -26573680 - STALKER4_I LTR Gypsy -5987 543 228 7 603 26 50 0 0 chrUextra 2430976 2431016 -26573640 + AT_rich Low_complexity Low_complexity 1 40 0 7 603 2559 58 55 15 chrUextra 2431104 2431462 -26573194 - STALKER4_LTR LTR Gypsy -3 399 64 7 603 979 66 96 0 chrUextra 2431459 2431595 -26573061 - FW2_DM LINE Jockey -3429 532 384 7 603 504 83 0 0 chrUextra 2431597 2431669 -26572987 - FW2_DM LINE Jockey -3805 156 85 7 603 442 95 0 31 chrUextra 2431769 2431834 -26572822 + RSP Satellite Satellite 55 117 -1 7 603 870 106 6 16 chrUextra 2431874 2432501 -26572155 + RSP Satellite Satellite 1 621 0 7 603 868 85 0 12 chrUextra 2432541 2432784 -26571872 + RSP Satellite Satellite 1 240 0 7 603 5143 46 106 74 chrUextra 2432974 2433836 -26570820 - ROO_I LTR Pao -7110 1146 258 7 603 1524 37 0 5 chrUextra 2434000 2434188 -26570468 - HETA LINE telomeric -2566 3515 3329 7 603 3228 32 61 2 chrUextra 2434190 2434599 -26570057 + NINJA_I LTR Pao 5579 6011 0 7 603 948 17 8 55 chrUextra 2434599 2434726 -26569930 + NINJA_LTR LTR Pao 1 121 -196 7 603 526 33 0 0 chrUextra 2434720 2434781 -26569875 - PROTOP_B DNA P -1092 61 1 7 603 1676 77 0 0 chrUextra 2434781 2435014 -26569642 - TART_B1 LINE telomeric -4967 5687 5455 7 603 358 77 19 0 chrUextra 2435114 2435166 -26569490 - Gypsy12_LTR LTR Gypsy -2283 53 1 7 603 6736 83 11 11 chrUextra 2435165 2436055 -26568601 - Gypsy12_I LTR Gypsy 0 5546 4657 7 603 659 26 0 0 chrUextra 2436053 2436129 -26568527 - PROTOP_A DNA P -950 155 80 7 603 2965 188 36 15 chrUextra 2436230 2436937 -26567719 - Jockey2 LINE Jockey -1608 1820 1419 7 603 646 148 29 59 chrUextra 2437107 2437243 -26567413 - Gypsy5_LTR LTR Gypsy -194 236 105 7 603 3295 26 0 0 chrUextra 2437344 2437723 -26566933 + G2_DM LINE Jockey 803 1181 -1921 7 603 5518 29 0 0 chrUextra 2437713 2438359 -26566297 + G2_DM LINE Jockey 2232 2877 -225 7 603 757 339 22 32 chrUextra 2438459 2438861 -26565795 + TV1I LTR Gypsy 572 969 -4994 7 603 911 245 7 11 chrUextra 2438863 2439135 -26565521 + TV1I LTR Gypsy 3864 4134 -1829 7 603 933 237 56 22 chrUextra 2439128 2439452 -26565204 + QUASIMODO_I LTR Gypsy 4257 4591 -1469 7 603 7622 45 84 12 chrUextra 2441801 2442815 -26561841 + DMCR1A LINE CR1 2497 3583 -887 7 603 1860 86 12 4 chrUextra 2442915 2443171 -26561485 + MDG1_LTR LTR Gypsy 164 421 -21 7 603 588 0 0 0 chrUextra 2444029 2444094 -26560562 - Invader2_LTR LTR Gypsy -201 65 1 7 603 4334 14 18 7 chrUextra 2444094 2445043 -26559613 - Invader2_I LTR Gypsy 0 4592 3586 7 603 1022 139 56 5 chrUextra 2445160 2445355 -26559301 - NTS_DM Other Other -35 205 1 7 603 299 106 21 0 chrUextra 2445446 2445493 -26559163 - NTS_DM Other Other -192 48 1 7 603 483 127 53 38 chrUextra 2445493 2445624 -26559032 - NTS_DM Other Other 0 240 108 7 603 856 108 8 0 chrUextra 2445632 2445761 -26558895 - NTS_DM Other Other -103 137 8 7 603 296 125 21 0 chrUextra 2445859 2445907 -26558749 - NTS_DM Other Other -191 49 1 7 603 1131 134 20 5 chrUextra 2445938 2446140 -26558516 - NTS_DM Other Other -35 205 1 7 603 1695 15 0 0 chrUextra 2446257 2446452 -26558204 - IDEFIX_LTR LTR Gypsy -399 195 1 7 603 3356 111 65 6 chrUextra 2446452 2447267 -26557389 - IDEFIX_I LTR Gypsy 0 5628 4516 7 603 8635 19 0 5 chrUextra 2447371 2447919 -26556737 + ROO_I LTR Pao 4944 5489 -2767 7 603 216 0 0 0 chrUextra 2447919 2447943 -26556713 + (TTATG)n Simple_repeat Simple_repeat 2 25 0 7 603 8635 19 0 5 chrUextra 2447943 2448384 -26556272 + ROO_I LTR Pao 5490 5928 -2328 7 603 2448 98 10 31 chrUextra 2448490 2449494 -26555162 + DMSAT6 Satellite Satellite 1 983 -18 7 603 4234 180 22 23 chrUextra 2449604 2450590 -26554066 + SAR_DM Satellite Satellite 180 1164 -308 7 603 568 203 21 14 chrUextra 2450464 2450609 -26554047 - XDMR_DM Unknown Unknown 0 360 215 7 603 3626 3 0 0 chrUextra 2450710 2451101 -26553555 - DMRT1B LINE R1 -20 5163 4773 7 603 2374 180 24 83 chrUextra 2451097 2451720 -26552936 - TART_B1 LINE telomeric -9086 1568 983 7 603 8804 19 18 0 chrUextra 2451823 2452836 -26551820 + PROTOP DNA P 886 1916 -2564 7 603 3979 2 0 0 chrUextra 2452936 2453374 -26551282 + DM176_I LTR Gypsy 2864 3301 -3119 7 603 434 20 0 0 chrUextra 2453387 2453436 -26551220 + DM176_I LTR Gypsy 3582 3630 -2790 7 603 4627 0 0 0 chrUextra 2453426 2453949 -26550707 + DM176_I LTR Gypsy 4513 5035 -1385 7 603 8774 25 5 0 chrUextra 2454049 2455062 -26549594 + R1_DM LINE R1 3915 4932 -424 7 603 3728 190 106 26 chrUextra 2455171 2456175 -26548481 - HETA LINE telomeric -461 5620 4537 7 603 6542 49 43 4 chrUextra 2456275 2457288 -26547368 - R1_DM LINE R1 -3916 1440 292 7 603 3028 103 41 117 chrUextra 2457389 2457929 -26546727 + Gypsy12_I LTR Gypsy 1323 1821 -3725 7 603 445 135 292 0 chrUextra 2457926 2458010 -26546646 + Gypsy12_I LTR Gypsy 4465 4574 -972 7 603 3470 15 0 0 chrUextra 2458010 2458400 -26546256 - PROTOP DNA P 0 4480 4091 7 603 8245 22 2 1 chrUextra 2458501 2459433 -26545223 - Gypsy4_I LTR Gypsy -2156 4132 3200 7 603 801 31 31 0 chrUextra 2459418 2459514 -26545142 - Gypsy4_I LTR Gypsy -3599 2689 2591 7 603 5027 11 0 0 chrUextra 2459614 2460168 -26544488 + Copia2_I LTR Copia 3607 4160 -2 7 603 233 29 0 0 chrUextra 2460170 2460202 -26544454 + Copia2_LTR_DM LTR Copia 1 32 -166 7 603 3217 3 0 0 chrUextra 2460202 2460548 -26544108 - Invader4_LTR LTR Gypsy 0 346 1 7 603 672 0 13 0 chrUextra 2460548 2460627 -26544029 - Invader4_I LTR Gypsy 0 2413 2334 7 603 9114 7 29 6 chrUextra 2460727 2461740 -26542916 + Invader6_I LTR Gypsy 148 1183 -2916 7 603 8833 26 0 0 chrUextra 2461840 2462852 -26541804 + DMRT1A LINE R1 1657 2668 -2515 7 603 4439 72 28 11 chrUextra 2462953 2463720 -26540936 + PROTOP_B DNA P 106 888 -217 7 603 313 50 0 0 chrUextra 2463713 2463773 -26540883 + PROTOP_B DNA P 572 631 -522 7 603 1423 48 16 0 chrUextra 2463778 2463966 -26540690 + PROTOP_B DNA P 794 984 -169 7 603 2469 94 12 39 chrUextra 2464066 2465073 -26539583 - DMSAT6 Satellite Satellite -149 979 1 7 603 1608 121 129 59 chrUextra 2465186 2465573 -26539083 - DM297_LTR LTR Gypsy 0 414 1 7 603 4793 42 3 3 chrUextra 2465587 2466181 -26538475 - IDEFIX_LTR LTR Gypsy 0 594 1 7 603 3744 170 20 18 chrUextra 2466305 2467103 -26537553 + SAR_DM Satellite Satellite 326 1125 -347 7 603 1830 14 0 0 chrUextra 2467093 2467302 -26537354 - DOC2_DM LINE Jockey 0 4793 4585 7 603 5912 18 40 0 chrUextra 2467402 2468414 -26536242 - DMRT1A LINE R1 -3564 1619 568 7 603 511 0 0 0 chrUextra 2468514 2468571 -26536085 + STALKER4_I LTR Gypsy 6474 6530 0 7 603 3376 52 1 14 chrUextra 2468571 2469010 -26535646 + STALKER4_LTR LTR Gypsy 1 399 -3 7 603 1149 66 0 0 chrUextra 2469626 2469778 -26534878 + ARS406_DM Unknown Unknown 38 189 -164 7 603 4065 187 18 20 chrUextra 2469675 2470614 -26534042 - SAR_DM Satellite Satellite -203 1269 333 7 603 1004 79 9 20 chrUextra 2470738 2471740 -26532916 + RSP Satellite Satellite 1 990 0 7 603 8783 24 1 1 chrUextra 2471850 2472862 -26531794 + R1_DM LINE R1 3619 4630 -726 7 603 4244 29 4 0 chrUextra 2473146 2473636 -26531020 + R1_DM LINE R1 4865 5356 0 7 603 2288 63 7 10 chrUextra 2473670 2473973 -26530683 + R1_DM LINE R1 24 325 -5031 7 603 4052 194 18 24 chrUextra 2474073 2475072 -26529584 - SAR_DM Satellite Satellite -821 993 1 7 603 3826 10 29 2 chrUextra 2475184 2475666 -26528990 + STALKER4_I LTR Gypsy 6036 6530 0 7 603 694 48 0 0 chrUextra 2475666 2475749 -26528907 + STALKER4_LTR LTR Gypsy 1 83 -319 7 603 4019 18 0 0 chrUextra 2475744 2476195 -26528461 - STALKER4_I LTR Gypsy -1740 4790 4340 7 603 3974 196 25 21 chrUextra 2476295 2477305 -26527351 + SAR_DM Satellite Satellite 1 1014 -203 7 603 1754 154 57 56 chrUextra 2477405 2477838 -26526818 - TART LINE telomeric -9441 5036 4698 7 603 1828 106 226 26 chrUextra 2477809 2478158 -26526498 - TART LINE telomeric -10448 4029 3611 7 603 1801 80 0 12 chrUextra 2478160 2478412 -26526244 - TART LINE telomeric -6449 8028 7780 7 603 494 0 0 0 chrUextra 2478517 2478573 -26526083 - NOMAD_I LTR Gypsy -6516 56 1 7 603 4800 0 0 0 chrUextra 2478573 2479091 -26525565 - NOMAD_LTR LTR Gypsy 0 518 1 7 603 3869 5 0 0 chrUextra 2479091 2479525 -26525131 + ROO_I LTR Pao 4710 5143 -3113 7 603 5089 6 0 0 chrUextra 2479625 2480174 -26524482 - DOC LINE Jockey -4173 552 4 7 603 3548 58 18 2 chrUextra 2480178 2480635 -26524021 + Gypsy4_I LTR Gypsy 3950 4341 -1947 7 603 2474 185 15 4 chrUextra 2480759 2481745 -26522911 + SAR_DM Satellite Satellite 1 996 -645 7 603 8769 13 38 0 chrUextra 2481845 2482853 -26521803 + QUASIMODO_I LTR Gypsy 2186 3231 -2829 7 603 3604 3 0 0 chrUextra 2482955 2483341 -26521315 - TABOR_LTR LTR Gypsy -115 391 6 7 603 1815 44 64 21 chrUextra 2483340 2483574 -26521082 - PROTOP DNA P -4236 244 1 7 603 5282 140 60 1 chrUextra 2484065 2485069 -26519587 - HETA LINE telomeric -2794 3287 2042 7 603 1385 246 33 13 chrUextra 2485173 2485564 -26519092 - TOM_I LTR Gypsy -1157 4955 4557 7 603 446 252 17 17 chrUextra 2485564 2485681 -26518975 - DM297_I LTR Gypsy -2673 3494 3378 7 603 2431 181 59 21 chrUextra 2485654 2486179 -26518477 - TOM_I LTR Gypsy -2954 3158 2614 7 603 2305 29 0 0 chrUextra 2486282 2486561 -26518095 + Invader1_I LTR Gypsy 2908 3186 0 7 603 3843 7 0 5 chrUextra 2486561 2486986 -26517670 + Invader1_LTR LTR Gypsy 1 423 0 7 603 2817 10 0 0 chrUextra 2486986 2487291 -26517365 + Invader1_I LTR Gypsy 1 305 -2881 7 603 4070 53 3 79 chrUextra 2487391 2488001 -26516655 + Gypsy7_I LTR Gypsy 935 1498 -3486 7 603 3176 60 0 0 chrUextra 2488001 2488400 -26516256 + FW_DM LINE Jockey 111 509 -4183 7 603 8402 18 28 2 chrUextra 2488500 2489509 -26515147 - G6_DM LINE Jockey -299 1743 32 7 603 1562 208 147 9 chrUextra 2489664 2490120 -26514536 - Stalker2_I LTR Gypsy -6607 795 277 7 75 351 250 8 41 chrUextra 2490327 2490424 -26514232 - STALKER4_LTR LTR Gypsy -27 375 283 7 604 629 73 10 0 chrUextra 2490424 2490520 -26514136 - IDEFIX_LTR LTR Gypsy 0 594 498 7 604 734 31 10 10 chrUextra 2490521 2490618 -26514038 - IDEFIX_LTR LTR Gypsy -304 290 194 7 604 678 202 12 58 chrUextra 2490838 2491011 -26513645 + HETRP_DM Satellite Satellite 1518 1682 -190 7 604 755 184 12 58 chrUextra 2491141 2491314 -26513342 + HETRP_DM Satellite Satellite 1518 1682 -190 7 604 733 194 11 62 chrUextra 2491414 2491590 -26513066 + HETRP_DM Satellite Satellite 1518 1684 -188 7 604 198 0 0 0 chrUextra 2491705 2491727 -26512929 + (GA)n Simple_repeat Simple_repeat 2 23 0 7 604 2554 108 24 22 chrUextra 2491839 2492831 -26511825 + DMSAT6 Satellite Satellite 1 993 -18 7 604 914 97 15 0 chrUextra 2492936 2493070 -26511586 - DM297_I LTR Gypsy -6012 155 20 7 604 2477 92 39 8 chrUextra 2493076 2493460 -26511196 - DM297_LTR LTR Gypsy -18 396 1 7 604 2254 167 97 5 chrUextra 2493509 2493943 -26510713 - FW_DM LINE Jockey -3176 1516 1043 7 604 9395 2 0 0 chrUextra 2494043 2495051 -26509605 + Gypsy6_I LTR Gypsy 3338 4345 -2667 7 604 3040 290 10 7 chrUextra 2495157 2496158 -26508498 - ROVER-I_DM LTR Gypsy -1997 4587 3584 7 604 4311 221 7 15 chrUextra 2496259 2497260 -26507396 - Stalker2_I LTR Gypsy -1825 5577 4585 7 604 2441 52 27 18 chrUextra 2497367 2497697 -26506959 + BATUMI_I LTR Pao 6669 7001 -962 7 604 5411 98 11 5 chrUextra 2497535 2498375 -26506281 - BATUMI_I LTR Pao -1063 6851 5765 7 604 1428 6 0 0 chrUextra 2498475 2498634 -26506022 - NOMAD_I LTR Gypsy -6413 159 1 7 604 3733 5 0 0 chrUextra 2498634 2499041 -26505615 - NOMAD_LTR LTR Gypsy 0 518 112 7 604 2918 58 55 0 chrUextra 2499039 2499420 -26505236 + PROTOP_A DNA P 704 1105 0 7 604 987 17 0 0 chrUextra 2499583 2499700 -26504956 + (TTA)n Simple_repeat Simple_repeat 3 119 0 7 604 1144 81 19 0 chrUextra 2499720 2499880 -26504776 + Jockey2 LINE Jockey 3089 3251 -177 7 604 428 53 60 34 chrUextra 2499883 2500000 -26504656 + (TTA)n Simple_repeat Simple_repeat 1 120 0 7 604 591 27 0 0 chrUextra 2500000 2500073 -26504583 + (TTA)n Simple_repeat Simple_repeat 3 75 0 7 604 564 93 62 0 chrUextra 2500081 2500178 -26504478 + Jockey2 LINE Jockey 3321 3423 -5 7 604 805 100 282 0 chrUextra 2500205 2500375 -26504281 - DNAREP1_DM LINE Penelope -175 419 202 7 604 8673 33 7 0 chrUextra 2500691 2501699 -26502957 - R1_DM LINE R1 -2070 3286 2272 7 604 1469 101 50 0 chrUextra 2501799 2502018 -26502638 + S_DM DNA Tc1 1025 1254 -482 7 604 1940 94 73 3 chrUextra 2502008 2502337 -26502319 + S_DM DNA Tc1 1383 1734 -2 7 604 984 150 11 53 chrUextra 2502351 2502541 -26502115 - ACCORD2_I LTR Gypsy -6188 1024 843 7 604 1745 121 0 4 chrUextra 2502557 2502807 -26501849 - ACCORD2_I LTR Gypsy -6458 754 506 7 604 2659 3 0 0 chrUextra 2502907 2503205 -26501451 + G6_DM LINE Jockey 1745 2042 0 7 604 180 0 0 0 chrUextra 2503205 2503225 -26501431 + (A)n Simple_repeat Simple_repeat 1 20 0 7 604 2063 13 0 8 chrUextra 2503225 2503460 -26501196 + MICROPIA_I LTR Gypsy 403 635 -3841 7 604 4208 13 0 0 chrUextra 2503449 2503914 -26500742 + MICROPIA_I LTR Gypsy 742 1206 -3270 7 604 3683 204 31 12 chrUextra 2504017 2505021 -26499635 - SAR_DM Satellite Satellite -862 1023 1 7 604 4911 37 27 8 chrUextra 2505121 2505720 -26498936 + SSU-rRNA_Dme rRNA rRNA 1264 1873 -122 7 604 1059 46 23 0 chrUextra 2505715 2505846 -26498810 + LSU-rRNA_Dme rRNA rRNA 978 1111 -2789 7 604 351 64 0 0 chrUextra 2505839 2505886 -26498770 + LSU-rRNA_Dme rRNA rRNA 1575 1621 -2279 7 604 1007 43 420 9 chrUextra 2505876 2506113 -26498543 + LSU-rRNA_Dme rRNA rRNA 2009 2342 -1558 7 604 6293 9 3 0 chrUextra 2506228 2506926 -26497730 + DMRT1B LINE R1 4038 4737 -446 7 604 2871 3 0 0 chrUextra 2506922 2507235 -26497421 + DMRT1B LINE R1 4697 5009 -174 7 604 5636 26 88 3 chrUextra 2507336 2508038 -26496618 - NINJA_I LTR Pao -303 5708 4947 7 604 2693 29 0 0 chrUextra 2508027 2508342 -26496314 - NINJA_I LTR Pao -3092 2919 2605 7 604 2541 116 9 25 chrUextra 2508442 2508876 -26495780 + TAHRE LINE telomeric 10037 10463 0 7 604 1394 167 63 86 chrUextra 2508868 2509449 -26495207 + HETA LINE telomeric 1 616 -5465 7 604 7725 23 1 10 chrUextra 2509549 2510459 -26494197 - FW_DM LINE Jockey -1191 3501 2600 7 604 870 10 0 0 chrUextra 2510458 2510555 -26494101 - FW_DM LINE Jockey -2499 2193 2097 7 604 2948 18 0 3 chrUextra 2510655 2510987 -26493669 - R1_DM LINE R1 -3263 2093 1763 7 604 5258 43 1 5 chrUextra 2511001 2511656 -26493000 - R1_DM LINE R1 -4265 1091 439 7 604 686 182 36 0 chrUextra 2511761 2511898 -26492758 - TAHRE LINE telomeric -3278 7185 7044 7 604 1994 207 135 91 chrUextra 2511897 2512742 -26491914 - TART LINE telomeric -3421 11056 10175 7 604 5380 2 0 0 chrUextra 2512867 2513456 -26491200 + FW_DM LINE Jockey 4102 4690 -2 7 604 2635 33 0 0 chrUextra 2513454 2513760 -26490896 - DM1731_LTR LTR Copia -24 312 7 7 604 3420 60 91 0 chrUextra 2513973 2514491 -26490165 + PROTOP_A DNA P 570 1105 0 7 604 1901 44 65 0 chrUextra 2514542 2514967 -26489689 + PROTOP DNA P 448 766 -339 7 604 1924 34 77 0 chrUextra 2515850 2516085 -26488571 + PROTOP DNA P 1 253 -4227 7 604 970 91 9 20 chrUextra 2516187 2517183 -26487473 - RSP Satellite Satellite -54 984 1 7 604 8046 9 4 58 chrUextra 2517291 2518297 -26486359 - Gypsy4_I LTR Gypsy -858 5430 4479 7 604 3643 5 0 0 chrUextra 2518397 2518835 -26485821 - DM176_I LTR Gypsy -25 6395 5958 7 604 1605 60 137 0 chrUextra 2518835 2519069 -26485587 - Invader2_LTR LTR Gypsy 0 266 1 7 604 2882 0 3 0 chrUextra 2519069 2519403 -26485253 - Invader2_I LTR Gypsy 0 4592 4258 7 604 2471 127 34 36 chrUextra 2519515 2519963 -26484693 + TART LINE telomeric 7000 7446 -7031 7 604 4674 15 2 13 chrUextra 2519963 2520501 -26484155 + PROTOP_A DNA P 1 532 -573 7 604 3651 2 0 2 chrUextra 2520609 2521013 -26483643 - Stalker2_LTR LTR Gypsy -21 403 1 7 604 4417 14 13 13 chrUextra 2521013 2521615 -26483041 - Stalker2_I LTR Gypsy 0 7402 6801 7 604 3897 2 0 0 chrUextra 2521715 2522136 -26482520 - NOMAD_LTR LTR Gypsy -97 421 1 7 604 339 65 0 0 chrUextra 2522136 2522182 -26482474 + (TA)n Simple_repeat Simple_repeat 1 46 0 7 604 1003 118 12 12 chrUextra 2522182 2522354 -26482302 + Gypsy11_LTR LTR Gypsy 281 452 0 7 604 480 133 100 0 chrUextra 2522383 2522473 -26482183 + DNAREP1_DM LINE Penelope 1 99 -495 7 604 1605 0 0 0 chrUextra 2522547 2522721 -26481935 + DM176_LTR LTR Gypsy 64 237 -270 7 604 1807 0 0 10 chrUextra 2522821 2523024 -26481632 + BATUMI_I LTR Pao 7763 7963 0 7 604 2159 39 7 31 chrUextra 2523024 2523315 -26481341 + BATUMI_I LTR Pao 7002 7285 -678 7 604 6246 32 4 56 chrUextra 2523927 2524766 -26479890 - NINJA_I LTR Pao -5181 830 36 7 604 1310 50 6 6 chrUextra 2524772 2524933 -26479723 - NINJA_LTR LTR Pao 0 317 157 7 604 9149 9 0 7 chrUextra 2525033 2526037 -26478619 + MICROPIA_I LTR Gypsy 1775 2771 -1705 7 604 1652 170 25 5 chrUextra 2526139 2526702 -26477954 + SAR_DM Satellite Satellite 1 574 -417 7 604 2051 159 35 9 chrUextra 2526719 2527144 -26477512 + SAR_DM Satellite Satellite 536 971 -501 7 604 2492 132 25 20 chrUextra 2527252 2528248 -26476408 + DMSAT6 Satellite Satellite 1 1001 -3 7 604 3574 218 20 21 chrUextra 2528360 2529354 -26475302 + SAR_DM Satellite Satellite 1 992 -225 7 604 5237 54 3 19 chrUextra 2529454 2530459 -26474197 + STALKER4_I LTR Gypsy 14 1119 -5411 7 604 3713 12 0 5 chrUextra 2530559 2530988 -26473668 + DOC LINE Jockey 4293 4719 -6 7 604 1820 237 155 5 chrUextra 2530983 2531563 -26473093 + BS LINE Jockey 2060 2726 -2400 7 604 1683 26 0 0 chrUextra 2531664 2531854 -26472802 - Invader2_LTR LTR Gypsy -76 190 1 7 604 7212 23 0 0 chrUextra 2531854 2532667 -26471989 + DMCR1A LINE CR1 3459 4271 -199 7 604 4882 27 12 0 chrUextra 2532771 2533332 -26471324 + R1_DM LINE R1 4789 5356 0 7 604 3214 61 5 5 chrUextra 2533365 2533774 -26470882 + R1_DM LINE R1 1 409 -4947 7 604 4087 201 12 20 chrUextra 2534979 2535984 -26468672 + SAR_DM Satellite Satellite 209 1205 -267 7 604 901 36 0 0 chrUextra 2536084 2536196 -26468460 + ARS406_DM Unknown Unknown 78 189 -164 7 604 3974 189 23 23 chrUextra 2536105 2537088 -26467568 - SAR_DM Satellite Satellite -216 1256 274 7 604 4547 6 8 2 chrUextra 2537188 2537697 -26466959 - DOC LINE Jockey -2390 2335 1824 7 604 1052 102 0 11 chrUextra 2537711 2537890 -26466766 + (TTA)n Simple_repeat Simple_repeat 1 177 0 7 604 3925 30 86 1 chrUextra 2538292 2539187 -26465469 - R1_DM LINE R1 -2115 3241 2271 7 604 464 0 0 0 chrUextra 2539180 2539230 -26465426 + CIRCE LINE Composite 4931 4980 -1376 7 604 950 137 0 0 chrUextra 2539396 2539549 -26465107 + ARS406_DM Unknown Unknown 37 189 -164 7 604 3666 205 33 29 chrUextra 2539438 2540389 -26464267 - SAR_DM Satellite Satellite -198 1274 321 7 604 1340 6 90 0 chrUextra 2540906 2541062 -26463594 + PROTOP_B DNA P 1 170 -983 7 604 1762 147 49 18 chrUextra 2541060 2541386 -26463270 + TART LINE telomeric 3548 3883 -10594 7 604 870 99 0 37 chrUextra 2541366 2541502 -26463154 + TART LINE telomeric 5323 5453 -9024 7 604 3997 192 24 25 chrUextra 2541604 2542608 -26462048 - SAR_DM Satellite Satellite -400 1072 70 7 604 2469 93 3 52 chrUextra 2542710 2543711 -26460945 - DMSAT6 Satellite Satellite -28 951 1 7 604 4471 108 111 29 chrUextra 2543812 2544815 -26459841 - STALKER4_I LTR Gypsy -5113 1417 297 7 604 8444 33 20 0 chrUextra 2544915 2545918 -26458738 - R1_DM LINE R1 -1812 3544 2522 7 604 3499 3 0 0 chrUextra 2546018 2546393 -26458263 - R2_DM LINE R2 -32 3575 3201 7 604 5821 9 0 0 chrUextra 2546386 2547021 -26457635 - R2_DM LINE R2 -594 3013 2379 7 604 2402 116 5 55 chrUextra 2547121 2547505 -26457151 + Gypsy12_LTR LTR Gypsy 1949 2313 -23 7 604 813 239 226 31 chrUextra 2547529 2547888 -26456768 + TAHRE LINE telomeric 9871 10299 -164 7 604 787 34 220 8 chrUextra 2548006 2548124 -26456532 + PROTOP_B DNA P 1 143 -1010 7 604 868 28 65 0 chrUextra 2548224 2548332 -26456324 + TART LINE telomeric 7608 7722 -6755 7 604 549 55 0 0 chrUextra 2548332 2548405 -26456251 + (TAAAG)n Simple_repeat Simple_repeat 3 75 0 7 604 2204 8 0 0 chrUextra 2548405 2548659 -26455997 + TART LINE telomeric 7786 8039 -6438 7 604 4245 70 0 0 chrUextra 2548656 2549227 -26455429 + TART_B1 LINE telomeric 1095 1665 -8989 7 604 2591 111 16 25 chrUextra 2549328 2550330 -26454326 - DMSAT6 Satellite Satellite -23 993 1 7 604 3155 9 0 0 chrUextra 2550551 2550895 -26453761 - BS LINE Jockey -1 5125 4782 7 604 3375 23 0 0 chrUextra 2551045 2551433 -26453223 + Gypsy4_I LTR Gypsy 374 761 -5527 7 604 720 43 0 0 chrUextra 2551533 2551626 -26453030 - BATUMI_I LTR Pao -568 7395 7303 7 604 2544 40 9 9 chrUextra 2551649 2551974 -26452682 + BATUMI_I LTR Pao 6427 6751 -1212 7 604 4773 21 3 11 chrUextra 2551967 2552536 -26452120 - BATUMI_I LTR Pao -4489 3474 2910 7 604 3194 0 2 10 chrUextra 2552636 2553045 -26451611 + HMSBEAGLE_I LTR Gypsy 382 787 -5742 7 604 891 38 49 12 chrUextra 2553063 2553225 -26451431 + (TTA)n Simple_repeat Simple_repeat 3 170 0 7 604 3699 0 2 2 chrUextra 2553225 2553639 -26451017 + HMSBEAGLE_I LTR Gypsy 976 1389 -5140 7 604 1074 0 0 0 chrUextra 2553739 2553861 -26450795 - QUASIMODO_LTR LTR Gypsy -535 123 2 7 604 429 0 49 0 chrUextra 2553861 2553922 -26450734 + (TA)n Simple_repeat Simple_repeat 1 64 0 7 604 814 138 55 65 chrUextra 2553922 2554123 -26450533 - ROVER-LTR_DM LTR Gypsy -1 366 168 7 604 728 163 75 53 chrUextra 2554179 2554406 -26450250 - ROVER-I_DM LTR Gypsy -6222 362 131 7 604 189 0 0 0 chrUextra 2554435 2554456 -26450200 + (T)n Simple_repeat Simple_repeat 1 21 0 7 604 431 165 13 0 chrUextra 2554498 2554577 -26450079 - ROVER-I_DM LTR Gypsy -6504 80 1 7 604 590 138 67 79 chrUextra 2554577 2554742 -26449914 - ROVER-LTR_DM LTR Gypsy 0 367 205 7 604 3746 32 0 5 chrUextra 2554842 2555277 -26449379 + R1_DM LINE R1 4924 5356 0 7 604 3621 62 27 11 chrUextra 2555310 2555845 -26448811 + R1_DM LINE R1 1 619 -4737 7 604 3426 29 0 0 chrUextra 2556164 2556549 -26448107 - DIVER2_LTR LTR Pao 0 385 1 7 604 3471 25 2 0 chrUextra 2556549 2556948 -26447708 - DIVER2_I LTR Pao 0 4147 3748 7 604 8523 41 2 0 chrUextra 2557048 2558045 -26446611 + G5_DM LINE Jockey 52 1050 -3806 7 604 2679 271 20 25 chrUextra 2558150 2559152 -26445504 + Copia_I LTR Copia 3203 4199 -394 7 604 8475 24 19 21 chrUextra 2559252 2560254 -26444402 + Gypsy12_LTR LTR Gypsy 61 1060 -1276 7 604 2256 41 0 7 chrUextra 2560354 2560623 -26444033 + R1_DM LINE R1 5090 5356 0 7 604 5577 57 3 4 chrUextra 2560657 2561356 -26443300 + R1_DM LINE R1 1 698 -4658 7 604 8370 30 22 0 chrUextra 2561456 2562458 -26442198 + MDG1_I LTR Gypsy 1884 2907 -3689 7 604 2481 4 0 0 chrUextra 2562558 2562829 -26441827 - HMSBEAGLE_I LTR Gypsy -6258 271 1 7 604 2474 8 0 0 chrUextra 2562828 2563094 -26441562 - DMLTR5 LTR Gypsy 0 266 1 7 604 3433 8 0 0 chrUextra 2563094 2563466 -26441190 - ROO_I LTR Pao -7884 372 1 7 604 836 0 0 0 chrUextra 2563466 2563560 -26441096 - ROO_LTR LTR Pao 0 428 335 7 604 4433 6 0 0 chrUextra 2563660 2564158 -26440498 + QUASIMODO_I LTR Gypsy 2450 2947 -3113 7 604 457 112 0 91 chrUextra 2564155 2564243 -26440413 + TRANSIB3 DNA Transib 791 870 -2013 7 604 561 29 43 0 chrUextra 2564224 2564294 -26440362 + TRANSIB3 DNA Transib 2808 2880 -3 7 604 470 260 82 39 chrUextra 2564360 2564592 -26440064 + Copia_I LTR Copia 3486 3727 -866 7 604 747 209 6 19 chrUextra 2565293 2565449 -26439207 - HETRP_DM Satellite Satellite -190 1682 1529 7 604 676 197 13 32 chrUextra 2565602 2565759 -26438897 - HETRP_DM Satellite Satellite -190 1682 1529 7 604 2496 109 9 30 chrUextra 2565864 2566866 -26437790 + DMSAT6 Satellite Satellite 1 980 -28 7 604 1932 14 0 5 chrUextra 2566966 2567182 -26437474 + Invader1_LTR LTR Gypsy 209 423 0 7 604 528 241 7 29 chrUextra 2567185 2567322 -26437334 - HETRP_DM Satellite Satellite -190 1682 1549 7 604 534 16 0 0 chrUextra 2567322 2567385 -26437271 + (TC)n Simple_repeat Simple_repeat 2 64 0 7 604 735 184 11 69 chrUextra 2567501 2567676 -26436980 - HETRP_DM Satellite Satellite -190 1682 1518 7 604 464 226 8 17 chrUextra 2567824 2567941 -26436715 - HETRP_DM Satellite Satellite -208 1664 1549 7 604 222 37 0 0 chrUextra 2567941 2567968 -26436688 + (TC)n Simple_repeat Simple_repeat 2 28 0 7 604 23 68 0 0 chrUextra 2568154 2568198 -26436458 + AT_rich Low_complexity Low_complexity 1 44 0 7 604 1755 267 93 29 chrUextra 2568206 2569070 -26435586 + Copia_I LTR Copia 1102 2020 -2573 7 604 4098 182 24 22 chrUextra 2569197 2570172 -26434484 - SAR_DM Satellite Satellite -411 976 1 7 604 926 185 33 22 chrUextra 2570272 2570627 -26434029 + SAR_DM Satellite Satellite 1 358 -1040 7 604 1077 176 26 12 chrUextra 2570638 2571273 -26433383 + SAR_DM Satellite Satellite 1 643 -680 7 604 2615 112 14 25 chrUextra 2571373 2572374 -26432282 + DMSAT6 Satellite Satellite 1 990 -29 7 604 1087 175 35 11 chrUextra 2572477 2573475 -26431181 - SAR_DM Satellite Satellite -810 1021 1 7 604 7901 39 3 2 chrUextra 2573575 2574576 -26430080 + STALKER4_I LTR Gypsy 5447 6448 -82 7 604 1160 21 107 0 chrUextra 2574767 2574907 -26429749 + PROTOP_B DNA P 1 155 -998 7 604 5781 85 25 12 chrUextra 2574905 2575677 -26428979 + Gypsy12_I LTR Gypsy 4657 5438 -108 7 604 1051 39 0 180 chrUextra 2575777 2575966 -26428690 + DMCR1A LINE CR1 2896 3050 -1420 7 604 3267 128 144 2 chrUextra 2575980 2576778 -26427878 - DOC LINE Jockey -1559 3166 2256 7 604 3741 70 120 10 chrUextra 2576878 2577879 -26426777 - R1_DM LINE R1 -4125 1231 42 7 604 3884 181 17 21 chrUextra 2577979 2578968 -26425688 + SAR_DM Satellite Satellite 1 984 -677 7 604 459 280 86 0 chrUextra 2579087 2579262 -26425394 - OSVALDO_I LTR Gypsy -4597 2056 1867 7 604 359 110 173 27 chrUextra 2579233 2579308 -26425348 - Gypsy8_I LTR Gypsy -3330 1017 932 7 604 1515 88 15 0 chrUextra 2579297 2579501 -26425155 - Gypsy8_I LTR Gypsy -3867 480 274 7 604 2368 72 2 58 chrUextra 2579506 2580081 -26424575 + DMSAT6 Satellite Satellite 1 542 -3 7 604 34 0 0 0 chrUextra 2580689 2580723 -26423933 + AT_rich Low_complexity Low_complexity 1 34 0 7 604 2288 25 94 0 chrUextra 2580858 2581135 -26423521 + PROTOP DNA P 1 303 -4177 7 604 360 62 0 0 chrUextra 2581134 2581182 -26423474 + PROTOP_B DNA P 336 383 -770 7 604 2500 111 97 112 chrUextra 2581282 2581820 -26422836 - TART LINE telomeric -6963 7514 6985 7 604 1127 165 70 47 chrUextra 2581818 2582278 -26422378 - TART LINE telomeric -3814 10663 9968 7 604 868 15 3 25 chrUextra 2582383 2582511 -26422145 + MDG1_I LTR Gypsy 6484 6596 0 7 604 423 100 0 0 chrUextra 2582515 2582585 -26422071 + (TAA)n Simple_repeat Simple_repeat 3 72 0 7 604 3132 20 0 0 chrUextra 2582585 2582941 -26421715 + MDG1_LTR LTR Gypsy 87 442 0 7 604 4058 9 0 0 chrUextra 2582941 2583384 -26421272 - MDG1_I LTR Gypsy -2587 4009 3567 7 604 8590 30 13 2 chrUextra 2583484 2584485 -26420171 - R1_DM LINE R1 -1237 4119 3108 7 604 6942 25 17 7 chrUextra 2584585 2585398 -26419258 + R1_DM LINE R1 4246 5066 -290 7 604 1002 35 0 0 chrUextra 2585395 2585509 -26419147 + R1_DM LINE R1 5243 5356 0 7 604 373 23 0 0 chrUextra 2585542 2585585 -26419071 + R1_DM LINE R1 1 43 -5313 7 604 7997 34 1 6 chrUextra 2585686 2586680 -26417976 + IDEFIX_I LTR Gypsy 2843 3831 -1797 7 604 1069 148 15 5 chrUextra 2586799 2587002 -26417654 - NTS_DM Other Other -35 205 1 7 604 283 125 21 0 chrUextra 2587084 2587132 -26417524 - NTS_DM Other Other -191 49 1 7 604 1141 142 29 21 chrUextra 2587132 2587370 -26417286 - NTS_DM Other Other 0 240 1 7 604 241 119 24 0 chrUextra 2587460 2587502 -26417154 - NTS_DM Other Other -191 49 7 7 604 437 129 70 39 chrUextra 2587508 2587637 -26417019 - NTS_DM Other Other 0 240 108 7 604 886 108 0 0 chrUextra 2587645 2587775 -26416881 - NTS_DM Other Other -103 137 8 7 604 5780 31 30 0 chrUextra 2587886 2588886 -26415770 - R1_DM LINE R1 -1968 3388 2324 7 604 437 95 155 0 chrUextra 2588986 2589070 -26415586 + TART_B1 LINE telomeric 2243 2339 -8315 7 604 4791 19 0 0 chrUextra 2589068 2589599 -26415057 + DMRT1A LINE R1 3602 4132 -1051 7 604 26 50 0 0 chrUextra 2589814 2589854 -26414802 + AT_rich Low_complexity Low_complexity 1 40 0 7 604 808 41 0 0 chrUextra 2589889 2589986 -26414670 + ROO_LTR LTR Pao 1 97 -331 7 604 8075 40 13 1 chrUextra 2590086 2591086 -26413570 - MDG1_I LTR Gypsy -1185 5411 4400 7 604 2305 29 33 0 chrUextra 2591186 2591461 -26413195 + R1_DM LINE R1 4783 5066 -290 7 604 1010 35 0 0 chrUextra 2591458 2591572 -26413084 + R1_DM LINE R1 5243 5356 0 7 604 4672 57 3 3 chrUextra 2591605 2592186 -26412470 + R1_DM LINE R1 1 581 -4775 7 604 22 35 0 0 chrUextra 2592449 2592478 -26412178 + AT_rich Low_complexity Low_complexity 1 29 0 7 604 45 62 0 0 chrUextra 2592565 2592645 -26412011 + AT_rich Low_complexity Low_complexity 1 80 0 7 604 182 59 0 81 chrUextra 2592646 2592683 -26411973 + (CAAAAA)n Simple_repeat Simple_repeat 6 39 0 7 604 359 0 0 0 chrUextra 2592699 2592739 -26411917 + STALKER4_I LTR Gypsy 6491 6530 0 7 604 2941 23 63 0 chrUextra 2592739 2592940 -26411716 + Stalker3_LTR LTR Gypsy 1 201 -171 7 604 207 0 0 0 chrUextra 2592940 2592963 -26411693 + (ATAAG)n Simple_repeat Simple_repeat 2 24 0 7 604 2941 23 63 0 chrUextra 2592963 2593111 -26411545 + Stalker3_LTR LTR Gypsy 202 370 -2 7 604 306 118 0 38 chrUextra 2593111 2593164 -26411492 + Stalker2_I LTR Gypsy 1 51 -7351 7 604 2989 43 6 0 chrUextra 2593386 2593737 -26410919 + BATUMI_I LTR Pao 6068 6420 -1543 7 604 4339 58 9 10 chrUextra 2593763 2594339 -26410317 - BATUMI_I LTR Pao -962 7001 6427 7 604 235 111 0 0 chrUextra 2594350 2594386 -26410270 + BATUMI_I LTR Pao 7303 7338 -625 7 604 21 0 0 0 chrUextra 2594566 2594587 -26410069 + AT_rich Low_complexity Low_complexity 1 21 0 7 604 357 262 118 100 chrUextra 2594695 2594975 -26409681 - Invader1_LTR LTR Gypsy -55 368 84 7 604 959 178 102 15 chrUextra 2595184 2595389 -26409267 + DMLTR5 LTR Gypsy 44 266 0 7 604 379 49 65 16 chrUextra 2595388 2595450 -26409206 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 7 604 684 197 13 26 chrUextra 2595668 2595824 -26408832 + HETRP_DM Satellite Satellite 1529 1682 -190 7 604 652 200 7 15 chrUextra 2595943 2596080 -26408576 + HETRP_DM Satellite Satellite 1529 1664 -208 7 604 699 193 7 14 chrUextra 2596225 2596367 -26408289 + HETRP_DM Satellite Satellite 1529 1669 -203 7 604 459 171 0 12 chrUextra 2596503 2596586 -26408070 + HETRP_DM Satellite Satellite 1529 1610 -262 7 604 8670 19 10 1 chrUextra 2596686 2597686 -26406970 - R1_DM LINE R1 -1192 4164 3156 7 604 2303 114 42 10 chrUextra 2597786 2598192 -26406464 + DMSAT6 Satellite Satellite 48 466 -4 7 604 2636 106 16 26 chrUextra 2598213 2598786 -26405870 + DMSAT6 Satellite Satellite 1 566 0 7 604 8755 16 8 0 chrUextra 2598907 2599886 -26404770 - G2_DM LINE Jockey -1810 1292 306 7 604 798 66 0 9 chrUextra 2599986 2600093 -26404563 - BATUMI_I LTR Pao -7857 106 1 7 604 2149 35 3 34 chrUextra 2600093 2600386 -26404270 - BATUMI_I LTR Pao -679 7284 7001 7 604 2059 202 59 61 chrUextra 2600380 2600986 -26403670 - TAHRE LINE telomeric -9781 682 78 7 604 3729 169 16 9 chrUextra 2601087 2602086 -26402570 + SAR_DM Satellite Satellite 1 1005 -425 7 604 8424 34 15 1 chrUextra 2602186 2603185 -26401471 + R1_DM LINE R1 3093 4105 -1251 7 604 4871 35 20 74 chrUextra 2603285 2603991 -26400665 - NINJA_I LTR Pao -5343 668 1 7 604 2300 39 21 11 chrUextra 2603992 2604277 -26400379 - NINJA_LTR LTR Pao -1 316 29 7 604 2436 120 26 36 chrUextra 2604396 2605373 -26399283 + DMSAT6 Satellite Satellite 1 967 -3 7 604 4947 6 4 0 chrUextra 2605483 2606029 -26398627 + QUASIMODO_LTR LTR Gypsy 111 658 0 7 604 835 280 18 28 chrUextra 2606029 2606477 -26398179 - DM412 LTR Gypsy -3316 3581 3200 7 604 2196 201 32 4 chrUextra 2606591 2607581 -26397075 - SAR_DM Satellite Satellite -436 1018 1 7 604 4073 205 10 25 chrUextra 2607686 2608680 -26395976 - SAR_DM Satellite Satellite -353 978 1 7 604 2954 129 6 16 chrUextra 2608780 2609270 -26395386 + TAHRE LINE telomeric 9979 10463 0 7 604 220 27 54 0 chrUextra 2609289 2609326 -26395330 + (TAAAA)n Simple_repeat Simple_repeat 1 39 0 7 604 1135 179 60 62 chrUextra 2609337 2609772 -26394884 + HETA LINE telomeric 19 452 -5629 7 604 9056 2 1 0 chrUextra 2609879 2610878 -26393778 - ACCORD_I LTR Gypsy -3105 3183 2184 7 604 37 39 0 0 chrUextra 2611185 2611236 -26393420 + AT_rich Low_complexity Low_complexity 1 51 0 7 604 22 35 0 0 chrUextra 2611337 2611366 -26393290 + AT_rich Low_complexity Low_complexity 1 29 0 7 604 21 57 0 0 chrUextra 2611526 2611561 -26393095 + AT_rich Low_complexity Low_complexity 1 35 0 7 604 2112 8 0 0 chrUextra 2611561 2611801 -26392855 + ALUII_DM Unknown Unknown 1 240 0 7 604 3355 181 28 25 chrUextra 2612077 2613071 -26391585 - SAR_DM Satellite Satellite -500 996 1 7 604 349 0 0 22 chrUextra 2613176 2613222 -26391434 - DOC2_DM LINE Jockey -2211 2582 2538 7 604 6252 60 32 13 chrUextra 2613240 2614175 -26390481 - DOC2_DM LINE Jockey -3099 1694 742 7 604 7053 33 22 41 chrUextra 2614275 2615274 -26389382 + BATUMI_I LTR Pao 2274 3253 -4710 7 604 3907 30 14 2 chrUextra 2615374 2615881 -26388775 + PROTOP_A DNA P 526 1038 -67 7 604 261 0 0 0 chrUextra 2615903 2615933 -26388723 + CIRCE LINE Composite 4951 4980 -1376 7 604 644 174 60 30 chrUextra 2616045 2616211 -26388445 - DNAREP1_DM LINE Penelope -336 258 88 7 604 904 51 185 0 chrUextra 2616211 2616368 -26388288 - PROTOP_B DNA P -250 903 718 7 604 8125 21 9 1 chrUextra 2616473 2617472 -26387184 + R1_DM LINE R1 2937 3943 -1413 7 604 5131 40 150 13 chrUextra 2617753 2618571 -26386085 + DIVER2_I LTR Pao 2417 3346 -801 7 604 1875 22 0 0 chrUextra 2618671 2618899 -26385757 + MDG3_I LTR Gypsy 2251 2478 -2508 7 604 26 0 0 0 chrUextra 2619372 2619398 -26385258 + AT_rich Low_complexity Low_complexity 1 26 0 7 604 3466 190 13 15 chrUextra 2619775 2620769 -26383887 + SAR_DM Satellite Satellite 1 991 -216 7 604 225 250 0 93 chrUextra 2620869 2620944 -26383712 + Gypsy7_I LTR Gypsy 3226 3293 -1691 7 605 24 53 0 0 chrUextra 2621445 2621483 -26383173 + AT_rich Low_complexity Low_complexity 1 38 0 7 605 1375 62 5 10 chrUextra 2621970 2622165 -26382491 - BATUMI_I LTR Pao -7769 194 1 7 605 1890 35 3 93 chrUextra 2622165 2622477 -26382179 - BATUMI_I LTR Pao -679 7284 7001 7 605 3599 49 0 4 chrUextra 2622472 2622967 -26381689 + ACCORD2_I LTR Gypsy 2718 3210 -4002 7 605 7734 19 37 3 chrUextra 2623067 2624066 -26380590 - STALKER4_I LTR Gypsy -485 6045 5013 7 605 3141 150 16 13 chrUextra 2624166 2625165 -26379491 + G2_DM LINE Jockey 4 1728 -314 7 605 6108 133 20 0 chrUextra 2625265 2626264 -26378392 + TAHRE LINE telomeric 1285 2303 -8160 7 605 1301 313 14 12 chrUextra 2626366 2626868 -26377788 - NINJA_I LTR Pao -4524 1487 985 7 605 28 48 0 0 chrUextra 2627665 2627707 -26376949 + AT_rich Low_complexity Low_complexity 1 42 0 7 605 562 92 35 0 chrUextra 2627980 2628067 -26376589 - NTS_DM Other Other -150 90 1 7 605 995 48 35 13 chrUextra 2628067 2628248 -26376408 - NTS_DM Other Other 0 240 26 7 605 246 150 0 0 chrUextra 2628325 2628365 -26376291 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 605 996 73 7 13 chrUextra 2628561 2628713 -26375943 - BATUMI_I LTR Pao -7812 151 1 7 605 1877 35 3 93 chrUextra 2628713 2629024 -26375632 - BATUMI_I LTR Pao -679 7284 7002 7 605 3126 53 1 16 chrUextra 2629061 2629501 -26375155 - STALKER4_LTR LTR Gypsy -3 399 1 7 605 1040 310 37 26 chrUextra 2629993 2630636 -26374020 - HMSBEAGLE_I LTR Gypsy -757 5772 5123 7 605 51 31 0 0 chrUextra 2631218 2631283 -26373373 + AT_rich Low_complexity Low_complexity 1 65 0 7 605 404 0 0 0 chrUextra 2631707 2631755 -26372901 - Invader1_LTR LTR Gypsy 0 423 376 7 605 2399 3 10 0 chrUextra 2631855 2632143 -26372513 - MDG3_I LTR Gypsy -4695 291 1 7 605 2295 4 0 0 chrUextra 2632142 2632409 -26372247 - MDG3_LTR LTR Gypsy 0 267 1 7 605 428 100 0 12 chrUextra 2632409 2632464 -26372192 + (TTCTC)n Simple_repeat Simple_repeat 2 56 0 7 605 1323 50 0 0 chrUextra 2632464 2632644 -26372012 + (CTTAT)n Simple_repeat Simple_repeat 1 180 0 7 605 428 100 0 12 chrUextra 2632644 2632669 -26371987 + (TTCTC)n Simple_repeat Simple_repeat 2 26 0 7 605 1389 39 0 0 chrUextra 2632669 2632849 -26371807 + (CTTAT)n Simple_repeat Simple_repeat 1 180 0 7 605 21 57 0 0 chrUextra 2632971 2633006 -26371650 + AT_rich Low_complexity Low_complexity 1 35 0 7 605 1156 24 0 24 chrUextra 2633006 2633175 -26371481 - NTS_DM Other Other -38 202 38 7 605 870 9 0 27 chrUextra 2633175 2633287 -26371369 - NTS_DM Other Other -107 133 25 7 605 1215 18 6 6 chrUextra 2633340 2633504 -26371152 - NTS_DM Other Other -39 201 38 7 605 870 9 0 27 chrUextra 2633504 2633616 -26371040 - NTS_DM Other Other -107 133 25 7 605 1222 18 0 12 chrUextra 2633668 2633834 -26370822 - NTS_DM Other Other -39 201 38 7 605 720 9 0 68 chrUextra 2633834 2633951 -26370705 - NTS_DM Other Other -107 133 25 7 605 8058 25 21 1 chrUextra 2634051 2635049 -26369607 - R1_DM LINE R1 -1246 4110 3093 7 605 4761 27 82 0 chrUextra 2635149 2635775 -26368881 + NINJA_I LTR Pao 1900 2576 -3435 7 605 291 215 0 0 chrUextra 2635789 2635854 -26368802 + Invader5_I LTR Gypsy 962 1026 -2308 7 605 569 306 12 8 chrUextra 2635890 2636147 -26368509 + MICROPIA_I LTR Gypsy 1897 2154 -2322 7 605 4467 17 15 5 chrUextra 2636247 2636850 -26367806 + Invader2_I LTR Gypsy 3984 4592 0 7 605 2209 26 0 0 chrUextra 2636850 2637116 -26367540 + Invader2_LTR LTR Gypsy 1 266 0 7 605 368 156 41 20 chrUextra 2637122 2637220 -26367436 + Gypsy12A_LTR LTR Gypsy 1634 1733 -547 7 605 1305 45 11 6 chrUextra 2637345 2637523 -26367133 + (GAGAA)n Simple_repeat Simple_repeat 2 180 0 7 605 651 150 28 23 chrUextra 2637539 2637716 -26366940 + GA-rich Low_complexity Low_complexity 1 178 0 7 605 4649 142 14 13 chrUextra 2638445 2639218 -26365438 - Gypsy3_I LTR Gypsy -4479 1698 925 7 605 4213 2 0 0 chrUextra 2639541 2640023 -26364633 - DOC LINE Jockey -4239 486 5 7 605 26 64 0 0 chrUextra 2640032 2640079 -26364577 + AT_rich Low_complexity Low_complexity 1 47 0 7 605 28 48 0 0 chrUextra 2640239 2640281 -26364375 + AT_rich Low_complexity Low_complexity 1 42 0 7 605 7459 44 32 7 chrUextra 2640639 2641637 -26363019 - R1_DM LINE R1 -3798 1558 536 7 605 3966 2 2 6 chrUextra 2641737 2642218 -26362438 + DOC LINE Jockey 4244 4722 -3 7 605 1543 87 0 5 chrUextra 2642515 2642735 -26361921 - DMRT1B LINE R1 -2 5181 4963 7 605 7765 31 7 9 chrUextra 2642835 2643833 -26360823 + BATUMI_I LTR Pao 1530 2525 -5438 7 605 4362 117 95 18 chrUextra 2643998 2644929 -26359727 - TART LINE telomeric -6799 7678 6876 7 605 1554 31 0 4 chrUextra 2645034 2645258 -26359398 + (TTCTC)n Simple_repeat Simple_repeat 1 223 0 7 605 1897 165 74 97 chrUextra 2645258 2646029 -26358627 + BATUMI_I LTR Pao 341 1093 -6870 7 605 3761 203 12 18 chrUextra 2646129 2647123 -26357533 + SAR_DM Satellite Satellite 261 1248 -224 7 605 2224 182 12 9 chrUextra 2647238 2648223 -26356433 - SAR_DM Satellite Satellite -397 987 1 7 605 316 178 50 108 chrUextra 2648371 2648491 -26356165 - Copia_I LTR Copia -80 4513 4401 7 605 22 56 0 0 chrUextra 2648536 2648572 -26356084 + AT_rich Low_complexity Low_complexity 1 36 0 7 605 2217 157 104 11 chrUextra 2648718 2649313 -26355343 + TART LINE telomeric 8952 9537 -4940 7 605 7114 18 1 0 chrUextra 2649420 2650274 -26354382 + STALKER4_I LTR Gypsy 3936 4790 -1740 7 605 625 60 0 0 chrUextra 2650269 2650352 -26354304 - STALKER4_LTR LTR Gypsy -319 83 1 7 605 410 46 123 0 chrUextra 2650352 2650417 -26354239 - STALKER4_I LTR Gypsy 0 6530 6458 7 605 4651 27 116 1 chrUextra 2650517 2651359 -26353297 + DMRT1B LINE R1 3764 4702 -481 7 605 1248 32 0 0 chrUextra 2651358 2651514 -26353142 + DOC2_DM LINE Jockey 3447 3602 -1191 7 605 291 255 0 31 chrUextra 2651616 2651713 -26352943 - Gypsy12_LTR LTR Gypsy -1564 772 679 7 605 1920 200 69 53 chrUextra 2651773 2652323 -26352333 - Gypsy12_LTR LTR Gypsy -1777 559 1 7 605 2156 80 0 3 chrUextra 2652322 2652611 -26352045 - Gypsy12_I LTR Gypsy 0 5546 5259 7 605 276 51 26 0 chrUextra 2652711 2652750 -26351906 + ARS406_DM Unknown Unknown 150 189 -164 7 605 2693 183 16 6 chrUextra 2652718 2653351 -26351305 - SAR_DM Satellite Satellite -625 847 209 7 605 1439 166 39 15 chrUextra 2653367 2653704 -26350952 - SAR_DM Satellite Satellite -729 743 399 7 605 4620 36 11 44 chrUextra 2653808 2654472 -26350184 - DOC2_DM LINE Jockey -3769 1024 383 7 605 1002 292 0 6 chrUextra 2654454 2654805 -26349851 - TOM_I LTR Gypsy -890 5222 4874 7 605 707 168 19 0 chrUextra 2655317 2655472 -26349184 + DNAREP1_DM LINE Penelope 82 239 -355 7 605 1288 185 53 110 chrUextra 2655447 2655902 -26348754 + DNAREP1_DM LINE Penelope 128 556 -38 7 605 549 315 16 46 chrUextra 2656069 2656375 -26348281 + HMSBEAGLE_I LTR Gypsy 2650 2946 -3583 7 605 1849 255 8 6 chrUextra 2656472 2656996 -26347660 + HMSBEAGLE_I LTR Gypsy 3101 3625 -2904 7 605 3366 182 13 19 chrUextra 2657099 2657224 -26347432 - SAR_DM Satellite Satellite -731 987 854 7 605 317 202 13 0 chrUextra 2657224 2657303 -26347353 + XDMR Unknown Unknown 282 361 0 7 605 3366 182 13 19 chrUextra 2657303 2658093 -26346563 - SAR_DM Satellite Satellite -731 853 1 7 605 3260 194 40 27 chrUextra 2658198 2659193 -26345463 + SAR_DM Satellite Satellite 1 1008 -208 7 605 4620 138 51 20 chrUextra 2660395 2661387 -26343269 - TART LINE telomeric -4466 10011 8989 7 605 487 158 16 8 chrUextra 2661487 2661608 -26343048 + PROTOP_B DNA P 327 448 -705 7 605 507 141 287 0 chrUextra 2661647 2661818 -26342838 - DNAREP1_DM LINE Penelope -199 395 176 7 605 25 0 0 0 chrUextra 2661920 2661945 -26342711 + AT_rich Low_complexity Low_complexity 1 25 0 7 605 3257 43 86 4 chrUextra 2662015 2662481 -26342175 + IDEFIX_LTR LTR Gypsy 1 504 -90 7 605 8219 13 1 8 chrUextra 2662583 2663579 -26341077 - FW_DM LINE Jockey -1856 2836 1848 7 605 7976 30 4 1 chrUextra 2663679 2664675 -26339981 - R1_DM LINE R1 -1325 4031 3033 7 605 2298 112 20 20 chrUextra 2664802 2665256 -26339400 + DMSAT6 Satellite Satellite 17 470 0 7 605 2036 118 65 9 chrUextra 2665289 2665734 -26338922 + DMSAT6 Satellite Satellite 1 470 0 7 605 639 38 123 143 chrUextra 2666205 2666359 -26338297 + PROTOP_B DNA P 328 478 -675 7 605 312 95 111 0 chrUextra 2666343 2666406 -26338250 + HOBO DNA hAT 330 399 -2617 7 605 359 73 44 89 chrUextra 2666405 2666495 -26338161 + HOBO DNA hAT 2337 2422 -594 7 605 24 0 0 0 chrUextra 2666495 2666519 -26338137 + AT_rich Low_complexity Low_complexity 1 24 0 7 605 1484 116 12 79 chrUextra 2666538 2666866 -26337790 + HOBO DNA hAT 2428 2733 -283 7 605 2753 137 4 11 chrUextra 2666967 2667439 -26337217 + TAHRE LINE telomeric 9995 10463 0 7 605 2946 168 17 0 chrUextra 2667438 2667963 -26336693 + HETA LINE telomeric 1450 1983 -4098 7 605 417 39 0 0 chrUextra 2668063 2668114 -26336542 + MDG3_LTR LTR Gypsy 217 267 0 7 605 8303 6 15 6 chrUextra 2668113 2669059 -26335597 + MDG3_I LTR Gypsy 1 954 -4032 7 605 2444 203 38 39 chrUextra 2669159 2670149 -26334507 - SAR_DM Satellite Satellite -691 988 1 7 605 6959 73 34 3 chrUextra 2670255 2671251 -26333405 - IDEFIX_I LTR Gypsy -1145 4483 3457 7 605 276 30 0 0 chrUextra 2671363 2671396 -26333260 + (TC)n Simple_repeat Simple_repeat 2 34 0 7 605 646 207 14 14 chrUextra 2671522 2671669 -26332987 - HETRP_DM Satellite Satellite -197 1675 1529 7 605 496 226 82 7 chrUextra 2671812 2671959 -26332697 - HETRP_DM Satellite Satellite -197 1675 1518 7 605 369 214 87 10 chrUextra 2672093 2672197 -26332459 + DNAREP1_DM LINE Penelope 67 178 -416 7 605 774 84 42 0 chrUextra 2672447 2672566 -26332090 + IDEFIX_I LTR Gypsy 741 864 -4764 7 605 6808 49 5 0 chrUextra 2672583 2673443 -26331213 + IDEFIX_I LTR Gypsy 2190 3053 -2575 7 605 353 0 0 65 chrUextra 2673543 2673589 -26331067 - NTS_DM Other Other -173 67 25 7 605 1304 18 0 6 chrUextra 2673641 2673806 -26330850 - NTS_DM Other Other -39 201 38 7 605 907 9 0 27 chrUextra 2673806 2673918 -26330738 - NTS_DM Other Other -107 133 25 7 605 2604 130 7 9 chrUextra 2673943 2674531 -26330125 - G6_DM LINE Jockey 0 2042 1739 7 605 8321 33 9 1 chrUextra 2674639 2675635 -26329021 - R1_DM LINE R1 -3251 2105 1102 7 605 4240 177 18 25 chrUextra 2675735 2676726 -26327930 - SAR_DM Satellite Satellite -243 1229 246 7 605 323 67 0 0 chrUextra 2676686 2676731 -26327925 + ARS406_DM Unknown Unknown 1 45 -308 7 605 6007 84 80 39 chrUextra 2677928 2678923 -26325733 + HETA LINE telomeric 511 1546 -4535 7 605 8791 10 0 0 chrUextra 2679028 2680019 -26324637 + BS LINE Jockey 524 1514 -3612 7 605 1060 77 0 6 chrUextra 2680119 2680275 -26324381 + ARS406_DM Unknown Unknown 35 189 -164 7 605 3674 195 21 26 chrUextra 2680171 2681114 -26323542 - SAR_DM Satellite Satellite -203 1269 332 7 605 881 334 24 22 chrUextra 2681218 2681766 -26322890 - HMSBEAGLE_I LTR Gypsy -1971 4558 4010 7 605 1687 269 5 0 chrUextra 2681764 2682210 -26322446 - HMSBEAGLE_I LTR Gypsy -2732 3797 3350 7 605 21 0 0 0 chrUextra 2683105 2683126 -26321530 + AT_rich Low_complexity Low_complexity 1 21 0 7 605 661 147 0 0 chrUextra 2683405 2683514 -26321142 - Gypsy5_I LTR Gypsy -2086 4423 4315 7 605 5292 161 1 1 chrUextra 2683514 2684400 -26320256 - Gypsy5_I LTR Gypsy -2512 3997 3112 7 605 180 0 0 0 chrUextra 2684883 2684903 -26319753 + (CAA)n Simple_repeat Simple_repeat 2 21 0 7 605 483 18 0 0 chrUextra 2685190 2685246 -26319410 + (CA)n Simple_repeat Simple_repeat 1 56 0 7 605 550 345 63 23 chrUextra 2685609 2686007 -26318649 + MICROPIA_I LTR Gypsy 1896 2309 -2167 7 605 577 324 72 28 chrUextra 2686002 2686475 -26318181 + MICROPIA_I LTR Gypsy 3487 3980 -496 7 605 2348 106 23 36 chrUextra 2686708 2687180 -26317476 + DMSAT6 Satellite Satellite 5 470 0 7 605 2593 87 21 23 chrUextra 2687196 2687667 -26316989 + DMSAT6 Satellite Satellite 1 470 0 7 605 4062 17 0 0 chrUextra 2687785 2688256 -26316400 + Copia2_I LTR Copia 3692 4162 0 7 605 3745 15 37 63 chrUextra 2688284 2688773 -26315883 + MICROPIA_LTR LTR Gypsy 1 476 0 7 605 3549 18 73 2 chrUextra 2688880 2689317 -26315339 - PROTOP_A DNA P -637 468 1 7 605 4811 13 6 0 chrUextra 2689326 2689875 -26314781 - Copia2_I LTR Copia -1285 2877 2326 7 605 8441 20 5 2 chrUextra 2689975 2690970 -26313686 + R1_DM LINE R1 3373 4370 -986 7 605 8339 23 25 0 chrUextra 2691070 2692065 -26312591 + FW_DM LINE Jockey 2453 3472 -1220 7 605 3615 9 5 5 chrUextra 2692165 2692607 -26312049 + BURDOCK_I LTR Gypsy 9 450 -5410 7 605 5126 0 0 0 chrUextra 2692585 2693160 -26311496 + BURDOCK_I LTR Gypsy 4628 5202 -658 7 605 8059 25 3 7 chrUextra 2693260 2694255 -26310401 - STALKER4_I LTR Gypsy -4472 2058 1068 7 605 3405 3 0 0 chrUextra 2694355 2694731 -26309925 + NOMAD_LTR LTR Gypsy 143 518 0 7 605 4900 200 56 0 chrUextra 2695450 2696445 -26308211 + ROVER-I_DM LTR Gypsy 2729 3779 -2805 7 605 3839 197 21 29 chrUextra 2696546 2697537 -26307119 - SAR_DM Satellite Satellite -361 982 1 7 605 306 105 0 50 chrUextra 2697684 2697744 -26306912 - Stalker2_I LTR Gypsy -7345 57 1 7 605 345 25 0 0 chrUextra 2697744 2697771 -26306885 - STALKER4_I LTR Gypsy -6503 27 1 7 605 3543 5 2 2 chrUextra 2697771 2698173 -26306483 - STALKER4_LTR LTR Gypsy 0 402 1 7 605 2321 48 0 0 chrUextra 2698173 2698468 -26306188 + MAX_I LTR Pao 7087 7381 -533 7 605 1073 30 0 0 chrUextra 2698500 2698635 -26306021 + MAX_I LTR Pao 7381 7515 -399 7 605 8260 6 31 1 chrUextra 2698742 2699730 -26304926 + QUASIMODO_I LTR Gypsy 3746 4763 -1297 7 605 3980 193 11 14 chrUextra 2699830 2700825 -26303831 - SAR_DM Satellite Satellite -399 991 1 7 605 7310 58 3 2 chrUextra 2700925 2701920 -26302736 + G_DM LINE Jockey 805 1743 -299 7 605 1250 0 0 0 chrUextra 2703115 2703258 -26301398 - ZAM_I LTR Gypsy -7347 143 1 7 605 2327 41 7 7 chrUextra 2703258 2703552 -26301104 - ZAM_LTR LTR Gypsy 0 472 179 7 605 1804 31 5 0 chrUextra 2703540 2703763 -26300893 - ZAM_LTR LTR Gypsy -248 224 1 7 605 511 247 152 22 chrUextra 2703763 2703940 -26300716 - TAHRE LINE telomeric -457 10006 9807 7 605 929 147 6 6 chrUextra 2703947 2704104 -26300552 - Gypsy12A_LTR LTR Gypsy -18 2262 2106 7 605 4049 196 15 18 chrUextra 2704212 2705202 -26299454 + SAR_DM Satellite Satellite 224 1210 -262 7 605 3112 51 57 45 chrUextra 2705328 2705817 -26298839 - DM176_LTR LTR Gypsy -26 481 1 7 605 2001 84 36 0 chrUextra 2705818 2706092 -26298564 + DIVER2_I LTR Pao 156 439 -3708 7 605 3093 286 14 14 chrUextra 2706407 2707386 -26297270 + HMSBEAGLE_I LTR Gypsy 3344 4322 -2207 7 605 1119 30 0 0 chrUextra 2707932 2708067 -26296589 + (CTTAT)n Simple_repeat Simple_repeat 3 137 0 7 605 4536 8 30 0 chrUextra 2708587 2709581 -26295075 - DOC2_DM LINE Jockey -995 3798 2775 7 605 23 68 0 0 chrUextra 2710121 2710165 -26294491 + AT_rich Low_complexity Low_complexity 1 44 0 7 605 26 30 0 0 chrUextra 2710211 2710244 -26294412 + AT_rich Low_complexity Low_complexity 1 33 0 7 605 701 25 0 0 chrUextra 2710596 2710675 -26293981 - PROTOP_B DNA P 0 1153 1075 7 605 22 0 0 0 chrUextra 2711272 2711294 -26293362 + AT_rich Low_complexity Low_complexity 1 22 0 7 605 1560 129 260 13 chrUextra 2711314 2711691 -26292965 - DNAREP1_DM LINE Penelope -124 470 1 7 605 378 77 19 0 chrUextra 2712001 2712053 -26292603 - DOC4_DM LINE Jockey -245 2546 2494 7 605 2323 165 30 24 chrUextra 2712068 2712533 -26292123 + DMCR1A LINE CR1 1938 2405 -2065 7 605 761 250 107 11 chrUextra 2712592 2712863 -26291793 - BS LINE Jockey -1688 3438 3142 7 605 4002 191 22 17 chrUextra 2712963 2713921 -26290735 - SAR_DM Satellite Satellite -315 1157 195 7 605 774 108 8 0 chrUextra 2713828 2713957 -26290699 + ARS406_DM Unknown Unknown 1 130 -223 7 605 1620 18 0 0 chrUextra 2714057 2714441 -26290215 + (TTATA)n Simple_repeat Simple_repeat 1 384 0 7 605 5062 30 8 3 chrUextra 2714441 2715051 -26289605 + IVK_DM LINE I 1 613 -4789 7 605 3897 194 19 25 chrUextra 2715152 2716145 -26288511 + SAR_DM Satellite Satellite 1 987 -203 7 605 4927 19 0 2 chrUextra 2716245 2716826 -26287830 - QUASIMODO_I LTR Gypsy -3016 3044 2465 7 605 2497 44 3 25 chrUextra 2716826 2717149 -26287507 - NINJA_LTR LTR Pao -1 316 1 7 605 717 44 11 0 chrUextra 2717149 2717239 -26287417 - NINJA_I LTR Pao 0 6011 5921 7 605 2263 260 21 28 chrUextra 2717339 2718322 -26286334 + DM412 LTR Gypsy 2512 3563 -3334 7 605 21 89 0 0 chrUextra 2718466 2718522 -26286134 + AT_rich Low_complexity Low_complexity 1 56 0 7 605 29 47 0 0 chrUextra 2718560 2718603 -26286053 + AT_rich Low_complexity Low_complexity 1 43 0 7 605 34 65 0 0 chrUextra 2718649 2718711 -26285945 + AT_rich Low_complexity Low_complexity 1 62 0 7 605 1736 30 0 0 chrUextra 2719062 2719263 -26285393 - PROTOP DNA P 0 4480 4280 7 605 885 48 163 0 chrUextra 2719261 2719427 -26285229 - PROTOP_B DNA P -432 721 530 7 605 8346 1 92 1 chrUextra 2719527 2720521 -26284135 + MAX_I LTR Pao 580 1663 -6251 7 605 737 71 0 0 chrUextra 2720621 2720720 -26283936 - QUASIMODO_I LTR Gypsy -1713 4347 4249 7 605 2371 136 10 25 chrUextra 2720877 2721285 -26283371 - GTWIN_LTR LTR Gypsy -93 402 1 7 605 2700 36 0 0 chrUextra 2721285 2721615 -26283041 - QUASIMODO_I LTR Gypsy -1808 4252 3923 7 605 1598 33 0 99 chrUextra 2721737 2721970 -26282686 - DIVER2_I LTR Pao -2572 1575 1366 7 605 1151 135 69 168 chrUextra 2723002 2723301 -26281355 + HOBO DNA hAT 44 312 -2704 7 605 2024 97 200 17 chrUextra 2723301 2723705 -26280951 + PROTOP_B DNA P 1 478 -675 7 605 864 83 0 0 chrUextra 2723682 2723803 -26280853 + HOBO DNA hAT 330 450 -2566 7 605 6068 79 48 28 chrUextra 2723903 2724897 -26279759 + STALKER4_I LTR Gypsy 484 1561 -4969 7 605 9088 1 21 0 chrUextra 2724997 2725990 -26278666 - BARI_DM DNA Tc1 -42 1686 673 7 605 8783 16 14 0 chrUextra 2726090 2727083 -26277573 - FW_DM LINE Jockey -3599 1093 87 7 605 7777 11 7 2 chrUextra 2727183 2728063 -26276593 + DOC LINE Jockey 3836 4719 -6 7 605 234 247 133 10 chrUextra 2728061 2728159 -26276497 + ROVER-I_DM LTR Gypsy 1624 1733 -4851 7 605 4825 25 101 3 chrUextra 2728276 2728883 -26275773 + NINJA_I LTR Pao 5050 5715 -296 7 605 1173 8 0 0 chrUextra 2728887 2729015 -26275641 - PROTOP_A DNA P -977 128 1 7 605 2135 28 0 4 chrUextra 2729015 2729269 -26275387 + NINJA_I LTR Pao 5469 5721 -290 7 605 21 0 0 0 chrUextra 2729586 2729607 -26275049 + AT_rich Low_complexity Low_complexity 1 21 0 7 605 2130 105 0 0 chrUextra 2730542 2730847 -26273809 - Invader2_I LTR Gypsy -1580 3012 2708 7 605 2996 44 18 0 chrUextra 2730837 2731220 -26273436 - DOC5_DM LINE Jockey -4292 390 1 7 605 1017 35 0 0 chrUextra 2731230 2731346 -26273310 - G3_DM LINE Jockey -1096 3509 3394 7 605 760 42 0 30 chrUextra 2731356 2731455 -26273201 - G3_DM LINE Jockey -1662 2943 2848 7 605 631 195 0 0 chrUextra 2731555 2731683 -26272973 + Gypsy11_I LTR Gypsy 2979 3106 -418 7 605 40 0 0 0 chrUextra 2731694 2731734 -26272922 + AT_rich Low_complexity Low_complexity 1 40 0 7 605 282 255 103 48 chrUextra 2731765 2731930 -26272726 + DM412 LTR Gypsy 6696 6869 -28 7 605 1055 0 0 0 chrUextra 2731930 2732043 -26272613 - Gypsy2_LTR LTR Gypsy 0 353 241 7 605 4015 9 0 7 chrUextra 2732087 2732548 -26272108 - Gypsy2_I LTR Gypsy -175 5960 5503 7 605 3936 222 58 16 chrUextra 2732657 2734727 -26269929 - SAR_DM Satellite Satellite -203 2157 1 7 605 4307 179 19 30 chrUextra 2734838 2735825 -26268831 + SAR_DM Satellite Satellite 246 1221 -251 7 605 6614 88 54 9 chrUextra 2735927 2736919 -26267737 - BATUMI_I LTR Pao -1616 6298 5223 7 605 183 42 0 0 chrUextra 2737464 2737488 -26267168 + (A)n Simple_repeat Simple_repeat 1 24 0 7 605 23 54 0 0 chrUextra 2737754 2737791 -26266865 + AT_rich Low_complexity Low_complexity 1 37 0 7 605 2608 100 30 17 chrUextra 2738113 2739106 -26265550 - DMSAT6 Satellite Satellite -157 1005 1 7 605 8883 9 12 2 chrUextra 2739206 2740199 -26264457 - MDG1_I LTR Gypsy -1967 4629 3627 7 605 475 110 0 24 chrUextra 2740300 2740384 -26264272 + DMLTR5 LTR Gypsy 185 266 0 7 605 2201 90 46 23 chrUextra 2740383 2740734 -26263922 + HMSBEAGLE_I LTR Gypsy 1 359 -6170 7 605 30 45 0 0 chrUextra 2740749 2740793 -26263863 + AT_rich Low_complexity Low_complexity 1 44 0 7 605 2168 129 70 6 chrUextra 2740947 2741289 -26263367 + HMSBEAGLE_I LTR Gypsy 1195 1558 -4971 7 605 4494 12 12 4 chrUextra 2741392 2741904 -26262752 - DMRT1A LINE R1 -2976 2207 1692 7 605 4039 52 0 0 chrUextra 2741885 2742385 -26262271 - TART LINE telomeric -11818 2659 2160 7 605 1192 63 6 6 chrUextra 2742485 2742661 -26261995 + (AATAG)n Simple_repeat Simple_repeat 2 177 0 7 605 239 196 18 0 chrUextra 2742661 2742717 -26261939 + (TATAA)n Simple_repeat Simple_repeat 3 59 0 7 605 1205 102 13 10 chrUextra 2742718 2743094 -26261562 + (AATAG)n Simple_repeat Simple_repeat 1 377 0 7 605 1458 56 0 16 chrUextra 2743107 2743477 -26261179 + (AATAG)n Simple_repeat Simple_repeat 1 363 0 7 605 4762 41 5 0 chrUextra 2743577 2744136 -26260520 - DIVER_I LTR Pao -5081 562 1 7 605 1316 103 0 118 chrUextra 2744157 2744411 -26260245 - DIVER_LTR LTR Pao 0 224 1 7 605 562 120 162 22 chrUextra 2744672 2744808 -26259848 + DNAREP1_DM LINE Penelope 117 271 -323 7 605 1017 125 54 0 chrUextra 2744810 2744978 -26259678 - DMCR1A LINE CR1 -171 4299 4123 7 605 313 262 220 55 chrUextra 2744951 2745169 -26259487 + Gypsy4_I LTR Gypsy 854 1107 -5181 7 605 293 188 62 0 chrUextra 2745312 2745376 -26259280 + Gypsy4_I LTR Gypsy 3517 3584 -2704 7 605 392 339 6 12 chrUextra 2745444 2745614 -26259042 + Gypsy4_I LTR Gypsy 4323 4491 -1797 7 605 8175 10 8 18 chrUextra 2745761 2746753 -26257903 + MAX_I LTR Pao 291 1272 -6642 7 605 1762 61 0 42 chrUextra 2746853 2747091 -26257565 + Gypsy4_LTR LTR Gypsy 60 287 0 7 605 599 230 0 0 chrUextra 2747219 2747345 -26257311 + Gypsy_I LTR Gypsy 6094 6219 -288 7 605 1305 205 48 64 chrUextra 2747347 2747784 -26256872 + Gypsy_LTR LTR Gypsy 33 462 -20 7 605 3970 197 14 19 chrUextra 2747945 2748937 -26255719 - SAR_DM Satellite Satellite -468 987 1 7 605 5971 10 36 4 chrUextra 2749037 2750029 -26254627 + BATUMI_I LTR Pao 4766 5789 -2174 7 605 3959 2 0 0 chrUextra 2750129 2750564 -26254092 + FW_DM LINE Jockey 4258 4692 0 7 605 1439 76 41 0 chrUextra 2750547 2750744 -26253912 + TRANSIB2 DNA Transib 2640 2844 0 7 605 2756 109 0 0 chrUextra 2750745 2751121 -26253535 - DMRT1B LINE R1 -1287 3896 3521 7 605 40 21 0 0 chrUextra 2751629 2751676 -26252980 + AT_rich Low_complexity Low_complexity 1 47 0 7 605 262 186 100 73 chrUextra 2751687 2751797 -26252859 + TABOR_LTR LTR Gypsy 3 115 -391 7 605 246 285 57 28 chrUextra 2751765 2751906 -26252750 + Gypsy11_LTR LTR Gypsy 101 245 -207 7 606 25 75 0 0 chrUextra 2752938 2752991 -26251665 + AT_rich Low_complexity Low_complexity 1 53 0 7 606 1143 238 13 10 chrUextra 2752998 2753303 -26251353 + XDMR Unknown Unknown 33 338 -23 7 606 4506 4 0 0 chrUextra 2753405 2753905 -26250751 - FW_DM LINE Jockey -4073 619 120 7 606 2204 112 6 18 chrUextra 2753912 2754249 -26250407 - Gypsy12_I LTR Gypsy -4991 555 223 7 606 267 223 19 46 chrUextra 2754224 2754332 -26250324 - Gypsy12_I LTR Gypsy -595 1685 1581 7 606 8121 40 18 12 chrUextra 2754497 2755489 -26249167 - DMCR1A LINE CR1 -2278 2192 1195 7 606 2428 0 31 0 chrUextra 2755589 2755876 -26248780 - ROO_I LTR Pao -7592 664 369 7 606 2466 8 0 0 chrUextra 2755876 2756142 -26248514 - DMLTR5 LTR Gypsy 0 266 1 7 606 3986 0 0 0 chrUextra 2756142 2756581 -26248075 - HMSBEAGLE_I LTR Gypsy 0 6529 6091 7 606 4058 31 0 6 chrUextra 2756681 2757164 -26247492 + HETA LINE telomeric 5600 6079 -2 7 606 4484 0 0 0 chrUextra 2757163 2757673 -26246983 + TAHRE LINE telomeric 7811 8320 -2143 7 606 7986 14 27 47 chrUextra 2757773 2758765 -26245891 - LSU-rRNA_Dme rRNA rRNA -1454 2446 1475 7 606 2529 99 5 39 chrUextra 2758866 2759254 -26245402 + CIRCE LINE Composite 3551 3925 -2431 7 606 2496 62 0 6 chrUextra 2759254 2759579 -26245077 + CIRCE LINE Composite 4658 4980 -1376 7 606 750 0 0 0 chrUextra 2759957 2760039 -26244617 + Invader3_LTR LTR Gypsy 217 298 0 7 606 8288 2 13 0 chrUextra 2760039 2760949 -26243707 + Invader3_I LTR Gypsy 1 922 -3966 7 606 4589 21 0 0 chrUextra 2761049 2761575 -26243081 - IDEFIX_I LTR Gypsy -3200 2428 1903 7 606 2269 45 21 3 chrUextra 2761551 2761842 -26242814 - IDEFIX_I LTR Gypsy -5332 296 1 7 606 22 35 0 0 chrUextra 2762205 2762234 -26242422 + AT_rich Low_complexity Low_complexity 1 29 0 7 606 47 33 0 0 chrUextra 2762526 2762587 -26242069 + AT_rich Low_complexity Low_complexity 1 61 0 7 606 48 32 0 0 chrUextra 2763064 2763126 -26241530 + AT_rich Low_complexity Low_complexity 1 62 0 7 606 4491 0 0 0 chrUextra 2763232 2763714 -26240942 - Copia_I LTR Copia -105 4488 4007 7 606 4607 6 0 6 chrUextra 2763695 2764223 -26240433 - Copia_I LTR Copia -804 3789 3265 7 606 8728 28 6 0 chrUextra 2764323 2765314 -26239342 + DMCR1A LINE CR1 331 1327 -3143 7 606 3573 40 0 0 chrUextra 2765414 2765840 -26238816 + MAX_I LTR Pao 2661 3086 -4828 7 606 3485 35 0 2 chrUextra 2765844 2766249 -26238407 + MAX_I LTR Pao 3376 3779 -4135 7 606 1303 32 0 7 chrUextra 2766250 2766405 -26238251 + MAX_I LTR Pao 4644 4797 -3117 7 606 3621 62 98 0 chrUextra 2766505 2766993 -26237663 + DMCR1A LINE CR1 2011 2546 -1924 7 606 521 51 0 132 chrUextra 2766992 2767083 -26237573 + DMCR1A LINE CR1 2759 2837 -1633 7 606 977 42 0 0 chrUextra 2767077 2767195 -26237461 + DMCR1A LINE CR1 2964 3081 -1389 7 606 1772 90 257 0 chrUextra 2767195 2767495 -26237161 + DMCR1A LINE CR1 3183 3559 -911 7 606 2652 107 47 25 chrUextra 2767596 2768587 -26236069 - DMSAT6 Satellite Satellite -35 1012 1 7 606 4345 57 4 4 chrUextra 2768687 2769229 -26235427 - R1_DM LINE R1 -4814 542 1 7 606 3534 24 10 5 chrUextra 2769262 2769678 -26234978 - R1_DM LINE R1 0 5356 4939 7 606 4703 38 10 46 chrUextra 2769783 2770390 -26234266 - CIRCE LINE Composite -5771 585 1 7 606 1036 68 0 0 chrUextra 2770390 2770522 -26234134 - CIRCE LINE Composite 0 6356 6225 7 606 2029 28 77 0 chrUextra 2770519 2770767 -26233889 - CIRCE LINE Composite -364 5992 5726 7 606 201 74 0 0 chrUextra 2771301 2771328 -26233328 + (TCTTG)n Simple_repeat Simple_repeat 1 27 0 7 606 1380 62 0 0 chrUextra 2771329 2771508 -26233148 + (CCTTG)n Simple_repeat Simple_repeat 1 179 0 7 606 2732 84 31 17 chrUextra 2771960 2772951 -26231705 + DMSAT6 Satellite Satellite 1 1005 -3 7 606 5204 9 0 0 chrUextra 2773051 2773623 -26231033 + QUASIMODO_LTR LTR Gypsy 87 658 0 7 606 392 103 14 29 chrUextra 2773652 2773713 -26230943 - DMTOM1_LTR LTR Gypsy -2 408 349 7 606 632 148 40 16 chrUextra 2773713 2773837 -26230819 - DMTOM1_LTR LTR Gypsy 0 410 284 7 606 282 191 59 0 chrUextra 2773854 2773922 -26230734 - DM176_LTR LTR Gypsy -141 366 295 7 606 1697 10 0 0 chrUextra 2774142 2774339 -26230317 - Invader2_I LTR Gypsy -2056 2536 2340 7 606 6539 25 19 0 chrUextra 2774337 2775126 -26229530 - Invader2_I LTR Gypsy -2648 1944 1141 7 606 6882 108 15 10 chrUextra 2775233 2776223 -26228433 + Gypsy12_I LTR Gypsy 2474 3468 -2078 7 606 3694 185 14 17 chrUextra 2778506 2779495 -26225161 + SAR_DM Satellite Satellite 1 985 -208 7 606 2798 17 6 0 chrUextra 2779606 2779955 -26224701 + G_DM LINE Jockey 3996 4346 0 7 606 4974 11 16 2 chrUextra 2779973 2780588 -26224068 + G_DM LINE Jockey 1 624 -3722 7 606 3514 188 38 22 chrUextra 2780689 2781656 -26223000 + SAR_DM Satellite Satellite 282 1264 -208 7 606 850 67 0 0 chrUextra 2781559 2781679 -26222977 - ARS406_DM Unknown Unknown -164 189 70 7 606 2815 37 3 0 chrUextra 2781780 2782131 -26222525 - DOC3_DM LINE Jockey -1324 3416 3065 7 606 5108 30 0 0 chrUextra 2782132 2782770 -26221886 + PROTOP_A DNA P 1 638 -467 7 606 2136 15 7 11 chrUextra 2782872 2783148 -26221508 - BLASTOPIA_LTR LTR Gypsy 0 275 1 7 606 1156 0 0 0 chrUextra 2783148 2783282 -26221374 - BLASTOPIA_I LTR Gypsy 0 4481 4348 7 606 5053 3 5 0 chrUextra 2783273 2783861 -26220795 - BLASTOPIA_I LTR Gypsy -978 3503 2913 7 606 328 48 0 0 chrUextra 2783965 2784007 -26220649 - PROTOP DNA P -1529 2951 2910 7 606 2704 57 114 0 chrUextra 2784031 2784435 -26220221 - PROTOP DNA P -3981 499 50 7 606 3096 210 19 18 chrUextra 2785051 2786040 -26218616 + SAR_DM Satellite Satellite 1 990 -208 7 606 8158 23 0 1 chrUextra 2786141 2787131 -26217525 - DM1731_I LTR Copia -2963 1013 25 7 606 2634 266 31 27 chrUextra 2787232 2788221 -26216435 - ROVER-I_DM LTR Gypsy -4523 2061 1069 7 606 7972 26 13 0 chrUextra 2788323 2789311 -26215345 - Gypsy4_I LTR Gypsy -4756 1532 532 7 606 4744 3 0 0 chrUextra 2789411 2789976 -26214680 + DOC LINE Jockey 4161 4725 0 7 606 180 0 0 0 chrUextra 2789991 2790011 -26214645 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 7 606 3143 23 0 3 chrUextra 2790011 2790401 -26214255 + DMRT1B LINE R1 163 551 -4632 7 606 3641 52 24 0 chrUextra 2790523 2791023 -26213633 - PROTOP DNA P -3968 512 1 7 606 297 95 47 16 chrUextra 2791193 2791257 -26213399 - TART LINE telomeric -6321 8156 8091 7 606 506 158 18 0 chrUextra 2791346 2791460 -26213196 - HETA LINE telomeric -171 5910 5795 7 606 865 127 23 57 chrUextra 2791954 2792130 -26212526 + ACCORD2_LTR LTR Gypsy 46 215 0 7 606 538 119 147 100 chrUextra 2792130 2792280 -26212376 + ACCORD2_I LTR Gypsy 1 157 -7055 7 606 448 0 0 0 chrUextra 2792277 2792328 -26212328 + ACCORD2_I LTR Gypsy 306 356 -6856 7 606 831 161 53 43 chrUextra 2792329 2792517 -26212139 + ACCORD2_LTR LTR Gypsy 26 215 0 7 606 7550 42 0 9 chrUextra 2792681 2793671 -26210985 + STALKER4_I LTR Gypsy 4401 5381 -1149 7 606 3144 0 0 5 chrUextra 2793771 2794160 -26210496 + DOC LINE Jockey 4339 4725 0 7 606 5029 13 0 0 chrUextra 2794164 2794761 -26209895 - IVK_DM LINE I -1403 3999 3403 7 606 22 35 0 0 chrUextra 2796137 2796166 -26208490 + AT_rich Low_complexity Low_complexity 1 29 0 7 606 208 200 31 0 chrUextra 2796359 2796424 -26208232 + (TTA)n Simple_repeat Simple_repeat 2 68 0 7 606 21 36 0 0 chrUextra 2796748 2796776 -26207880 + AT_rich Low_complexity Low_complexity 1 28 0 7 606 4456 34 2 2 chrUextra 2797041 2797598 -26207058 + R2_DM LINE R2 3029 3585 -22 7 606 191 32 65 0 chrUextra 2797598 2797629 -26207027 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 7 606 3276 10 2 10 chrUextra 2797629 2798030 -26206626 + LSU-rRNA_Dme rRNA rRNA 2584 2981 -919 7 606 291 232 0 0 chrUextra 2798821 2798890 -26205766 - BS2 LINE Jockey -507 4214 4146 7 606 1053 97 87 0 chrUextra 2799221 2799417 -26205239 - DMCR1A LINE CR1 -134 4336 4124 7 606 588 79 11 11 chrUextra 2799406 2799496 -26205160 - DMCR1A LINE CR1 -761 3709 3620 7 606 330 263 0 78 chrUextra 2799495 2799623 -26205033 - HMSBEAGLE_I LTR Gypsy -3032 3497 3380 7 606 3783 30 74 0 chrUextra 2800311 2801242 -26203414 - R1_DM LINE R1 -2080 3276 2277 7 606 436 0 0 0 chrUextra 2801242 2801292 -26203364 + CIRCE LINE Composite 4931 4980 -1376 7 606 8064 17 4 2 chrUextra 2801401 2802391 -26202265 + Gypsy4_I LTR Gypsy 4186 5177 -1111 7 606 4568 16 31 10 chrUextra 2802491 2803481 -26201175 + MAX_I LTR Pao 549 1637 -6277 7 606 3979 14 0 0 chrUextra 2803581 2804064 -26200592 - MDG3_I LTR Gypsy -3315 1671 1189 7 606 4379 6 0 0 chrUextra 2804063 2804571 -26200085 - MDG3_I LTR Gypsy -4022 964 457 7 606 694 0 12 0 chrUextra 2804671 2804756 -26199900 + BARI_DM DNA Tc1 1642 1727 -1 7 606 4972 4 6 0 chrUextra 2804756 2805661 -26198995 + BARI_DM DNA Tc1 4 966 -762 7 606 3580 200 30 13 chrUextra 2805762 2806750 -26197906 - SAR_DM Satellite Satellite -261 1211 207 7 606 3705 131 195 0 chrUextra 2806872 2807604 -26197052 - DMRT1B LINE R1 -340 4843 3968 7 606 1729 39 0 13 chrUextra 2807607 2807840 -26196816 + TRANSIB2 DNA Transib 10 239 -2605 7 606 5823 46 239 9 chrUextra 2807959 2808929 -26195727 + TART LINE telomeric 5300 7055 -7422 7 606 5359 109 28 6 chrUextra 2809029 2810015 -26194641 - STALKER4_I LTR Gypsy -442 6455 5326 7 606 1546 14 0 0 chrUextra 2810118 2810326 -26194330 + STALKER4_I LTR Gypsy 6312 6519 -11 7 606 2697 9 0 9 chrUextra 2810321 2810651 -26194005 + STALKER4_LTR LTR Gypsy 76 402 0 7 606 2235 167 5 7 chrUextra 2810678 2811107 -26193549 - ROVER-I_DM LTR Gypsy -1471 5113 4686 7 606 3058 53 38 0 chrUextra 2811208 2811626 -26193030 + DMCR1A LINE CR1 1751 2184 -2286 7 606 1359 92 9 9 chrUextra 2811626 2811846 -26192810 + DMCR1A LINE CR1 2317 2536 -1934 7 606 2096 58 0 0 chrUextra 2811851 2812126 -26192530 + DMCR1A LINE CR1 2643 2917 -1553 7 606 559 29 0 0 chrUextra 2812126 2812196 -26192460 + DMCR1A LINE CR1 3031 3100 -1370 7 606 21 0 0 0 chrUextra 2812438 2812459 -26192197 + AT_rich Low_complexity Low_complexity 1 21 0 7 606 1365 127 77 74 chrUextra 2812770 2813094 -26191562 - DNAREP1_DM LINE Penelope -262 332 8 7 606 299 165 25 42 chrUextra 2813165 2813285 -26191371 + PROTOP_B DNA P 311 428 -725 7 606 3475 58 70 0 chrUextra 2813573 2814247 -26190409 - PROTOP_A DNA P 0 1105 520 7 606 998 64 7 0 chrUextra 2814234 2814374 -26190282 - PROTOP_A DNA P -806 299 159 7 606 4353 0 0 10 chrUextra 2814477 2814981 -26189675 + HOBO DNA hAT 2518 3016 0 7 606 819 86 0 79 chrUextra 2815565 2815729 -26188927 + Gypsy12_I LTR Gypsy 666 816 -4730 7 606 1371 86 105 0 chrUextra 2815728 2815938 -26188718 + Gypsy12_I LTR Gypsy 1323 1554 -3992 7 606 373 77 0 0 chrUextra 2815945 2815997 -26188659 + Gypsy12_I LTR Gypsy 1503 1554 -3992 7 606 2174 110 0 12 chrUextra 2816004 2816327 -26188329 + Gypsy12_I LTR Gypsy 1503 1821 -3725 7 606 1508 71 116 0 chrUextra 2816324 2816549 -26188107 + Gypsy12_I LTR Gypsy 4465 4715 -831 7 606 5176 100 4 2 chrUextra 2816652 2817437 -26187219 + S_DM DNA Tc1 204 989 -747 7 606 1553 59 0 0 chrUextra 2817437 2817641 -26187015 + PROTOP_A DNA P 1 204 -901 7 606 1974 190 31 10 chrUextra 2817758 2818730 -26185926 - SAR_DM Satellite Satellite -396 992 1 7 606 2314 102 10 51 chrUextra 2818832 2819807 -26184849 + DMSAT6 Satellite Satellite 1 934 -3 7 606 2370 103 31 22 chrUextra 2819919 2820908 -26183748 - DMSAT6 Satellite Satellite -28 997 1 7 606 4844 10 0 0 chrUextra 2821008 2821596 -26183060 + STALKER4_I LTR Gypsy 5502 6089 -441 7 606 1550 21 67 0 chrUextra 2821613 2821851 -26182805 + STALKER4_I LTR Gypsy 6277 6530 0 7 606 1158 0 68 0 chrUextra 2821851 2821997 -26182659 + STALKER4_LTR LTR Gypsy 1 156 -246 7 606 3361 0 0 0 chrUextra 2822097 2822482 -26182174 - STALKER4_I LTR Gypsy -2351 4179 3795 7 606 5010 2 0 0 chrUextra 2822496 2823085 -26181571 - STALKER4_I LTR Gypsy -3859 2671 2083 7 606 832 217 5 5 chrUextra 2823185 2823393 -26181263 - Stalker2_I LTR Gypsy -6904 498 291 7 606 25 0 0 0 chrUextra 2823417 2823442 -26181214 + AT_rich Low_complexity Low_complexity 1 25 0 7 606 2571 40 86 0 chrUextra 2823583 2823932 -26180724 - STALKER4_LTR LTR Gypsy -23 379 1 7 606 295 240 10 20 chrUextra 2823932 2824034 -26180622 - Gypsy4_I LTR Gypsy -2017 4271 4171 7 606 323 199 27 5 chrUextra 2824052 2824170 -26180486 - Gypsy4_I LTR Gypsy -3523 2765 2650 7 606 284 280 56 0 chrUextra 2824391 2824498 -26180158 + NINJA_I LTR Pao 4448 4560 -1451 7 606 3283 202 34 19 chrUextra 2825361 2826317 -26178339 + SAR_DM Satellite Satellite 1 970 -255 7 606 5134 7 0 0 chrUextra 2826449 2827057 -26177599 - STALKER4_I LTR Gypsy -739 5791 5184 7 606 1104 35 7 0 chrUextra 2827056 2827188 -26177468 - DIVER_I LTR Pao -2219 3424 3292 7 606 1549 88 3 31 chrUextra 2827188 2827437 -26177219 - STALKER4_LTR LTR Gypsy -3 399 162 7 606 6728 15 63 2 chrUextra 2827537 2828525 -26176131 + SSU-rRNA_Dme rRNA rRNA 803 1850 -145 7 606 2249 126 18 21 chrUextra 2828625 2829613 -26175043 + DMSAT6 Satellite Satellite 1 984 -64 7 606 40 49 0 0 chrUextra 2829783 2829844 -26174812 + AT_rich Low_complexity Low_complexity 1 61 0 7 606 1557 85 4 46 chrUextra 2830822 2831082 -26173574 - BATUMI_I LTR Pao -7714 249 1 7 606 1925 35 3 90 chrUextra 2831082 2831392 -26173264 - BATUMI_I LTR Pao -679 7284 7002 7 606 279 125 235 0 chrUextra 2831395 2831787 -26172869 + (TTTAG)n Simple_repeat Simple_repeat 1 484 0 7 606 567 141 0 47 chrUextra 2832334 2832461 -26172195 + CT-rich Low_complexity Low_complexity 6 126 0 7 606 40 21 0 0 chrUextra 2833204 2833251 -26171405 + AT_rich Low_complexity Low_complexity 1 47 0 7 606 1972 18 4 0 chrUextra 2833740 2833965 -26170691 + Gypsy4_I LTR Gypsy 374 599 -5689 7 606 407 43 0 0 chrUextra 2834065 2834112 -26170544 - ROVER-I_DM LTR Gypsy -6537 47 1 7 606 3218 16 0 5 chrUextra 2834112 2834481 -26170175 - ROVER-LTR_DM LTR Gypsy 0 367 1 7 606 528 124 101 118 chrUextra 2834481 2834709 -26169947 + MAX_I LTR Pao 285 508 -7406 7 606 2112 87 6 12 chrUextra 2834709 2835048 -26169608 + S_DM DNA Tc1 3 339 -1397 7 606 2930 255 11 30 chrUextra 2835153 2836058 -26168598 + DM412 LTR Gypsy 5688 6575 -322 7 606 3199 25 3 0 chrUextra 2836241 2836601 -26168055 + Gypsy_LTR LTR Gypsy 122 482 0 7 606 5001 8 236 0 chrUextra 2836599 2837229 -26167427 + Gypsy_I LTR Gypsy 1 779 -5728 7 606 4315 8 0 0 chrUextra 2837329 2837803 -26166853 - DOC LINE Jockey -428 4297 3824 7 606 4644 4 0 0 chrUextra 2837809 2838317 -26166339 - DOC LINE Jockey -1078 3647 3140 7 606 442 179 403 0 chrUextra 2838417 2838618 -26166038 + PROTOP DNA P 3967 4248 -232 7 606 594 289 128 34 chrUextra 2838704 2839141 -26165515 - MICROPIA_I LTR Gypsy -626 3850 3163 7 606 646 247 50 42 chrUextra 2839143 2839405 -26165251 - MICROPIA_I LTR Gypsy -1098 3378 3115 7 606 4228 187 16 24 chrUextra 2839505 2840487 -26164169 + SAR_DM Satellite Satellite 208 1181 -291 7 606 829 133 0 0 chrUextra 2840592 2840727 -26163929 - ARS406_DM Unknown Unknown -218 135 1 7 606 4098 192 8 19 chrUextra 2840631 2841569 -26163087 + SAR_DM Satellite Satellite 192 1118 -354 7 606 361 202 0 21 chrUextra 2841483 2841579 -26163077 - XDMR_DM Unknown Unknown 0 360 267 7 606 3639 190 35 50 chrUextra 2841679 2842665 -26161991 + SAR_DM Satellite Satellite 250 1221 -251 7 606 3847 167 33 18 chrUextra 2842768 2843620 -26161036 - SAR_DM Satellite Satellite -417 1055 191 7 606 423 254 0 0 chrUextra 2843631 2843753 -26160903 - SAR_DM Satellite Satellite -749 723 602 7 606 7912 20 45 15 chrUextra 2843853 2844840 -26159816 - ROO_I LTR Pao -4706 3550 2535 7 606 2411 189 65 30 chrUextra 2844957 2845927 -26158729 + SAR_DM Satellite Satellite 1 1004 -839 7 606 7831 39 54 10 chrUextra 2846027 2847014 -26157642 - DOC3_DM LINE Jockey -1839 2901 1872 7 606 3890 186 44 34 chrUextra 2847126 2848073 -26156583 - HETA LINE telomeric -655 5426 4470 7 606 1318 35 0 45 chrUextra 2848201 2848378 -26156278 - NINJA_LTR LTR Pao -148 169 1 7 606 1021 99 56 20 chrUextra 2848390 2848585 -26156071 + ACCORD2_I LTR Gypsy 1525 1726 -5486 7 606 956 187 5 31 chrUextra 2848585 2848778 -26155878 + Gypsy12_LTR LTR Gypsy 1 188 -2148 7 606 613 229 102 60 chrUextra 2848789 2849188 -26155468 + Gypsy12_LTR LTR Gypsy 1427 1878 -458 7 606 4751 127 52 52 chrUextra 2849288 2850275 -26154381 - PROTOP_B DNA P -83 1070 84 7 606 26 0 0 0 chrUextra 2850378 2850404 -26154252 + AT_rich Low_complexity Low_complexity 1 26 0 7 606 2492 184 113 106 chrUextra 2850404 2851339 -26153317 + Gypsy12A_LTR LTR Gypsy 1007 1969 -367 7 606 2567 100 19 20 chrUextra 2851464 2852449 -26152207 - DMSAT6 Satellite Satellite -61 984 1 7 606 5897 1 0 3 chrUextra 2852551 2853202 -26151454 + DOC LINE Jockey 4076 4724 -1 7 606 376 49 65 16 chrUextra 2853229 2853291 -26151365 - HMSBEAGLE_I LTR Gypsy -6464 65 1 7 606 977 178 102 15 chrUextra 2853290 2853495 -26151161 - DMLTR5 LTR Gypsy 0 266 44 7 606 2239 306 50 19 chrUextra 2854724 2855705 -26148951 + Invader6_I LTR Gypsy 1588 2598 -1501 7 606 3586 3 0 0 chrUextra 2855810 2856202 -26148454 - R2_DM LINE R2 -2528 1079 688 7 606 621 0 0 0 chrUextra 2856200 2856268 -26148388 - R1_DM LINE R1 -5288 68 1 7 606 4872 2 0 2 chrUextra 2856268 2856797 -26147859 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2105 7 606 2460 113 30 21 chrUextra 2856897 2857881 -26146775 + DMSAT6 Satellite Satellite 1 992 -116 7 606 567 50 75 0 chrUextra 2857984 2858064 -26146592 - TART LINE telomeric -10709 3768 3683 7 606 5805 74 61 33 chrUextra 2858059 2858971 -26145685 - TART LINE telomeric -11115 3362 2425 7 606 396 192 279 39 chrUextra 2859379 2859548 -26145108 - DNAREP1_DM LINE Penelope -325 269 59 7 606 2550 43 3 5 chrUextra 2859548 2859873 -26144783 + Gypsy6A_LTR LTR Gypsy 1 408 -12 7 606 1670 11 0 0 chrUextra 2859873 2860058 -26144598 + Gypsy12_LTR LTR Gypsy 1 185 -2151 7 606 2554 125 16 16 chrUextra 2860158 2861142 -26143514 - DMSAT6 Satellite Satellite -39 983 1 7 606 1389 33 16 37 chrUextra 2861245 2861432 -26143224 + G5A_DM LINE Jockey 2656 2838 -3 7 606 628 267 131 20 chrUextra 2861458 2861710 -26142946 - Gypsy7_I LTR Gypsy -3317 1667 1388 7 606 3222 51 0 5 chrUextra 2861834 2862232 -26142424 - PROTOP_A DNA P 0 1105 710 7 606 1336 184 20 4 chrUextra 2862332 2862578 -26142078 - MICROPIA_I LTR Gypsy -3954 522 273 7 606 4605 87 45 28 chrUextra 2862645 2863319 -26141337 - DMCR1A LINE CR1 -228 4242 3558 7 606 3781 12 2 2 chrUextra 2863967 2864397 -26140259 - Gypsy5_LTR LTR Gypsy 0 430 1 7 606 2640 84 56 12 chrUextra 2864506 2865491 -26139165 + DMSAT6 Satellite Satellite 1 1028 -37 7 606 2202 30 0 0 chrUextra 2865594 2865856 -26138800 - FW_DM LINE Jockey -1311 3381 3120 7 606 1443 284 41 23 chrUextra 2866677 2867240 -26137416 + Copia2_I LTR Copia 730 1302 -2860 7 606 574 31 0 0 chrUextra 2867308 2867373 -26137283 + PROTOP_B DNA P 11 75 -1078 7 606 2206 73 14 0 chrUextra 2867375 2867663 -26136993 + BS2 LINE Jockey 4412 4703 -18 7 606 8748 21 1 3 chrUextra 2867763 2868749 -26135907 - BATUMI_I LTR Pao -2054 5909 4926 7 606 3081 35 0 5 chrUextra 2868849 2869221 -26135435 - IDEFIX_LTR LTR Gypsy -93 501 132 7 606 4686 55 16 2 chrUextra 2869220 2869835 -26134821 - IDEFIX_I LTR Gypsy -558 5070 4447 7 606 2416 96 26 54 chrUextra 2871021 2872003 -26132653 - DMSAT6 Satellite Satellite -109 955 1 7 606 3482 90 49 53 chrUextra 2872111 2872870 -26131786 + Gypsy12_LTR LTR Gypsy 1501 2336 0 7 606 3879 198 20 13 chrUextra 2873193 2874179 -26130477 + SAR_DM Satellite Satellite 1 992 -203 7 606 2321 122 28 2 chrUextra 2874285 2874711 -26129945 + MDG1_I LTR Gypsy 785 1221 -5375 7 606 4451 53 7 0 chrUextra 2874701 2875265 -26129391 + MDG1_I LTR Gypsy 1134 1701 -4895 7 606 2938 0 0 15 chrUextra 2875365 2875689 -26128967 + HOBO DNA hAT 2698 3016 0 7 606 8243 39 0 0 chrUextra 2876451 2877434 -26127222 - STALKER4_I LTR Gypsy -2589 3941 2959 7 606 422 135 40 0 chrUextra 2877542 2877616 -26127040 + DMCR1A LINE CR1 394 470 -4000 7 606 5358 21 6 40 chrUextra 2877627 2878324 -26126332 + DOC5_DM LINE Jockey 3979 4651 -31 7 606 242 0 61 0 chrUextra 2878326 2878359 -26126297 + (TATAA)n Simple_repeat Simple_repeat 2 36 0 7 606 298 125 62 0 chrUextra 2879086 2879166 -26125490 + GA-rich Low_complexity Low_complexity 5 89 0 7 606 8126 41 1 1 chrUextra 2879709 2880695 -26123961 + R1_DM LINE R1 743 1728 -3628 7 606 4065 190 12 17 chrUextra 2880803 2881781 -26122875 - SAR_DM Satellite Satellite -417 973 1 7 606 2507 55 9 17 chrUextra 2881881 2882454 -26122202 - Invader2_I LTR Gypsy -3846 746 2 7 606 1064 52 37 0 chrUextra 2882475 2882611 -26122045 - Invader2_LTR LTR Gypsy -125 141 1 7 606 309 274 29 29 chrUextra 2882628 2882767 -26121889 + Gypsy5_I LTR Gypsy 902 1040 -5469 7 75 8876 5 9 0 chrUextra 2882967 2883953 -26120703 + STALKER4_I LTR Gypsy 1653 2647 -3883 7 607 2607 96 12 40 chrUextra 2884064 2884543 -26120113 - DMSAT6 Satellite Satellite 0 470 5 7 607 2524 91 17 30 chrUextra 2884572 2885038 -26119618 - DMSAT6 Satellite Satellite 0 470 11 7 607 3328 180 6 7 chrUextra 2885138 2885821 -26118835 - SAR_DM Satellite Satellite -594 878 197 7 607 753 124 0 0 chrUextra 2885730 2885851 -26118805 + ARS406_DM Unknown Unknown 1 121 -232 7 607 1445 167 11 7 chrUextra 2885839 2886123 -26118533 - SAR_DM Satellite Satellite -545 927 643 7 607 3068 0 0 0 chrUextra 2886223 2886552 -26118104 + LSU-rRNA_Dme rRNA rRNA 2227 2555 -1345 7 607 1630 0 0 0 chrUextra 2886575 2886750 -26117906 + R2_DM LINE R2 3427 3601 -6 7 607 4276 4 0 0 chrUextra 2886746 2887208 -26117448 + LSU-rRNA_Dme rRNA rRNA 2578 3039 -861 7 607 1775 34 0 0 chrUextra 2887308 2887512 -26117144 - PROTOP_A DNA P -901 204 1 7 607 332 204 124 110 chrUextra 2887704 2888293 -26116363 - ROVER-I_DM LTR Gypsy -5804 780 184 7 607 8197 9 7 1 chrUextra 2888393 2889378 -26115278 + DMRT1B LINE R1 687 1677 -3506 7 607 998 95 0 0 chrUextra 2889480 2889638 -26115018 + ARS406_DM Unknown Unknown 1 158 -195 7 607 1725 182 17 7 chrUextra 2889645 2890049 -26114607 - SAR_DM Satellite Satellite -569 903 496 7 607 644 63 53 0 chrUextra 2890054 2890149 -26114507 + ARS406_DM Unknown Unknown 90 189 -164 7 607 1705 168 23 15 chrUextra 2890064 2890458 -26114198 - SAR_DM Satellite Satellite -569 903 507 7 607 943 37 7 29 chrUextra 2890563 2890703 -26113953 - NINJA_I LTR Pao -5874 137 1 7 607 2202 49 0 10 chrUextra 2890703 2890994 -26113662 - NINJA_LTR LTR Pao 0 317 30 7 607 4124 37 33 2 chrUextra 2891005 2891548 -26113108 + PROTOP DNA P 1 560 -3920 7 607 3374 203 25 12 chrUextra 2891648 2892627 -26112029 + SAR_DM Satellite Satellite 1 991 -203 7 607 8000 8 42 0 chrUextra 2892733 2893715 -26110941 - STALKER4_I LTR Gypsy -2282 4248 3226 7 607 2950 210 27 14 chrUextra 2893818 2894800 -26109856 - SAR_DM Satellite Satellite -844 994 1 7 607 885 0 0 9 chrUextra 2894903 2895010 -26109646 + NTS_DM Other Other 13 118 -122 7 607 293 47 0 23 chrUextra 2895010 2895054 -26109602 + (TA)n Simple_repeat Simple_repeat 1 43 0 7 607 525 13 0 62 chrUextra 2895114 2895194 -26109462 + NTS_DM Other Other 59 133 -107 7 607 655 40 29 20 chrUextra 2895194 2895296 -26109360 + NTS_DM Other Other 38 140 -100 7 607 248 172 17 17 chrUextra 2895532 2895591 -26109065 + DM176_LTR LTR Gypsy 308 366 -141 7 607 552 148 40 16 chrUextra 2895608 2895732 -26108924 + DMTOM1_LTR LTR Gypsy 284 410 0 7 607 388 100 14 28 chrUextra 2895732 2895795 -26108861 + DMTOM1_LTR LTR Gypsy 349 410 0 7 607 243 181 0 108 chrUextra 2895795 2895888 -26108768 + ROVER-I_DM LTR Gypsy 1 83 -6501 7 607 2350 78 14 49 chrUextra 2895988 2896957 -26107699 + DMSAT6 Satellite Satellite 1 934 0 7 607 2395 116 13 22 chrUextra 2897094 2898033 -26106623 + DMSAT6 Satellite Satellite 1 929 -6 7 607 314 328 16 11 chrUextra 2898346 2898537 -26106119 - BLASTOPIA_I LTR Gypsy -749 3732 3541 7 607 335 296 19 19 chrUextra 2898873 2899035 -26105621 - MDG3_I LTR Gypsy -1562 3424 3263 7 607 3561 5 0 2 chrUextra 2899243 2899659 -26104997 - DOC LINE Jockey -4279 446 32 7 607 550 199 25 56 chrUextra 2899688 2899848 -26104808 - DMCR1A LINE CR1 -2190 2280 2126 7 607 528 188 0 0 chrUextra 2900765 2900893 -26103763 + (AATAG)n Simple_repeat Simple_repeat 2 129 0 7 607 1640 112 32 7 chrUextra 2901413 2901692 -26102964 + TART LINE telomeric 9197 9482 -4995 7 607 225 329 84 42 chrUextra 2901995 2902328 -26102328 - BLASTOPIA_I LTR Gypsy -1 4480 4134 7 607 3958 0 0 0 chrUextra 2902498 2902952 -26101704 - DOC6_DM LINE Jockey -2286 1936 1483 7 607 2116 54 7 0 chrUextra 2902951 2903231 -26101425 - Baggins1 LINE LOA -3886 1567 1286 7 607 2010 42 8 0 chrUextra 2903218 2903483 -26101173 - Baggins1 LINE LOA -4512 941 675 7 607 906 72 36 0 chrUextra 2903583 2903721 -26100935 + QUASIMODO_I LTR Gypsy 5033 5175 -885 7 607 1653 34 0 0 chrUextra 2903732 2903967 -26100689 + QUASIMODO_I LTR Gypsy 5493 5727 -333 7 607 2484 93 35 32 chrUextra 2904067 2904501 -26100155 + QUASIMODO_LTR LTR Gypsy 91 658 0 7 607 428 36 0 0 chrUextra 2904668 2904723 -26099933 + ARS406_DM Unknown Unknown 135 189 -164 7 607 3318 186 60 16 chrUextra 2904674 2905648 -26099008 - SAR_DM Satellite Satellite -256 1016 1 7 607 5021 0 15 0 chrUextra 2905753 2906346 -26098310 + BARI_DM DNA Tc1 1126 1727 -1 7 607 3376 0 0 0 chrUextra 2906346 2906738 -26097918 + BARI_DM DNA Tc1 4 395 -1333 7 607 4337 0 0 0 chrUextra 2906838 2907338 -26097318 - FW_DM LINE Jockey -4192 500 1 7 607 412 88 44 0 chrUextra 2907432 2907500 -26097156 - DNAREP1_DM LINE Penelope -2 592 522 7 607 406 149 0 0 chrUextra 2907497 2907564 -26097092 - Gypsy_LTR LTR Gypsy -415 67 1 7 607 1727 121 0 0 chrUextra 2907564 2907820 -26096836 - Gypsy_I LTR Gypsy 0 6507 6252 7 607 1888 16 0 65 chrUextra 2907923 2908183 -26096473 + CIRCE LINE Composite 5185 5427 -929 7 607 5267 20 14 0 chrUextra 2908270 2908908 -26095748 + CIRCE LINE Composite 5428 6074 -282 7 607 1111 14 7 7 chrUextra 2909008 2909157 -26095499 + IDEFIX_LTR LTR Gypsy 446 594 0 7 607 25 0 0 0 chrUextra 2909347 2909372 -26095284 + AT_rich Low_complexity Low_complexity 1 25 0 7 607 2190 4 0 0 chrUextra 2909736 2909993 -26094663 + IDEFIX_I LTR Gypsy 1 257 -5371 7 607 222 37 0 0 chrUextra 2910856 2910883 -26093773 + (TA)n Simple_repeat Simple_repeat 2 28 0 7 607 2415 98 33 21 chrUextra 2911178 2912160 -26092496 - DMSAT6 Satellite Satellite -38 993 1 7 607 942 337 65 31 chrUextra 2912360 2913242 -26091414 - Invader6_I LTR Gypsy -1504 2595 1684 7 607 228 114 0 0 chrUextra 2913347 2913382 -26091274 - Invader1_I LTR Gypsy 0 3186 3152 7 607 645 269 5 5 chrUextra 2914122 2914331 -26090325 - Invader1_I LTR Gypsy -622 2564 2356 7 607 205 51 51 0 chrUextra 2914891 2914930 -26089726 + (TA)n Simple_repeat Simple_repeat 1 41 0 7 607 426 70 0 0 chrUextra 2915516 2915573 -26089083 + DM297_I LTR Gypsy 732 788 -5379 7 607 491 61 60 12 chrUextra 2915561 2915644 -26089012 - DM297_I LTR Gypsy -6080 87 1 7 607 526 99 369 0 chrUextra 2915644 2915810 -26088846 - DM297_LTR LTR Gypsy 0 414 187 7 607 313 233 23 11 chrUextra 2915835 2915922 -26088734 - R1-2_DM LINE R1 -12 5344 5257 7 607 299 167 0 0 chrUextra 2916036 2916098 -26088558 - R1-2_DM LINE R1 0 3216 3167 7 607 2454 97 113 10 chrUextra 2916094 2916499 -26088157 - R1-2_DM LINE R1 -551 2665 2219 7 607 22 0 0 0 chrUextra 2916825 2916847 -26087809 + AT_rich Low_complexity Low_complexity 1 22 0 7 607 30 0 0 0 chrUextra 2916889 2916919 -26087737 + AT_rich Low_complexity Low_complexity 1 30 0 7 607 1913 246 27 4 chrUextra 2917011 2917574 -26087082 - DM297_I LTR Gypsy -1864 4303 3728 7 607 2470 102 6 31 chrUextra 2917685 2918667 -26085989 - DMSAT6 Satellite Satellite -61 957 1 7 607 4602 115 99 41 chrUextra 2918769 2919751 -26084905 - TART LINE telomeric -4242 10235 9197 7 607 2204 22 0 4 chrUextra 2919851 2920120 -26084536 - PROTOP_A DNA P -837 268 1 7 607 4462 95 1 28 chrUextra 2920120 2920832 -26083824 - HETA LINE telomeric -119 5962 5270 7 607 7540 42 35 1 chrUextra 2920935 2921919 -26082737 - R1_DM LINE R1 -3355 2001 985 7 607 362 198 18 26 chrUextra 2922020 2922134 -26082522 + XDMR_DM Unknown Unknown 248 360 0 7 607 3715 213 24 23 chrUextra 2922056 2924087 -26080569 - SAR_DM Satellite Satellite -361 2032 1 7 607 2434 106 24 5 chrUextra 2924188 2925170 -26079486 - DMSAT6 Satellite Satellite -61 1000 1 7 607 2649 48 152 4 chrUextra 2925271 2925790 -26078866 - IVK_DM LINE I -890 4512 3917 7 607 2286 148 37 11 chrUextra 2925794 2926253 -26078403 + Gypsy12_LTR LTR Gypsy 1706 2176 -160 7 607 7420 9 0 0 chrUextra 2926355 2927223 -26077433 - Copia2_I LTR Copia -2062 2100 1233 7 607 1025 0 8 0 chrUextra 2927218 2927339 -26077317 - Copia2_I LTR Copia -3039 1123 1002 7 607 4922 21 0 40 chrUextra 2927439 2928122 -26076534 + DOC5_DM LINE Jockey 3996 4651 -31 7 607 260 0 57 0 chrUextra 2928122 2928157 -26076499 + (TATAA)n Simple_repeat Simple_repeat 5 41 0 7 607 2753 9 27 0 chrUextra 2928523 2928851 -26075805 + DM1731_I LTR Copia 2879 3215 -761 7 607 4320 51 142 0 chrUextra 2928865 2929507 -26075149 - TRANSIB2 DNA Transib -1377 1467 735 7 607 2178 180 11 9 chrUextra 2929609 2930589 -26074067 + SAR_DM Satellite Satellite 1 982 -473 7 607 255 111 0 0 chrUextra 2930691 2930736 -26073920 - ARS406_DM Unknown Unknown -308 45 1 7 607 3646 202 13 16 chrUextra 2930696 2931669 -26072987 + SAR_DM Satellite Satellite 246 1215 -257 7 607 391 74 0 0 chrUextra 2931621 2931675 -26072981 - ARS406_DM Unknown Unknown -164 189 136 7 607 2491 36 0 0 chrUextra 2931775 2932083 -26072573 + DMRT1B LINE R1 4876 5183 0 7 607 546 28 106 0 chrUextra 2932101 2932243 -26072413 + (CAGAC)n Simple_repeat Simple_repeat 1 157 0 7 607 3140 52 26 0 chrUextra 2932255 2932759 -26071897 + DMRT1A LINE R1 1 662 -4521 7 607 3516 192 17 19 chrUextra 2932859 2933793 -26070863 + SAR_DM Satellite Satellite 333 1264 -208 7 607 990 75 7 0 chrUextra 2933696 2933842 -26070814 - ARS406_DM Unknown Unknown -164 189 43 7 607 4137 172 143 49 chrUextra 2933944 2935891 -26068765 + Baggins1 LINE LOA 3061 5191 -262 7 607 3348 0 0 0 chrUextra 2936110 2936503 -26068153 + FW_DM LINE Jockey 4300 4692 0 7 607 1836 5 32 0 chrUextra 2936506 2936727 -26067929 + Gypsy4_I LTR Gypsy 3669 3896 -2392 7 607 2969 14 3 0 chrUextra 2936740 2937093 -26067563 + Gypsy4_I LTR Gypsy 3950 4303 -1985 7 607 339 319 31 31 chrUextra 2937858 2938087 -26066569 - Gypsy3_I LTR Gypsy -4643 1492 1179 7 607 3498 5 0 9 chrUextra 2938276 2938702 -26065954 + FW_DM LINE Jockey 4271 4692 0 7 607 4300 15 0 18 chrUextra 2938700 2939259 -26065397 - PROTOP_A DNA P -351 754 206 7 607 1913 13 4 0 chrUextra 2939359 2939588 -26065068 - MDG1_LTR LTR Gypsy -126 316 87 7 607 423 100 0 0 chrUextra 2939588 2939658 -26064998 + (TTA)n Simple_repeat Simple_repeat 3 72 0 7 607 1772 221 101 30 chrUextra 2939675 2940337 -26064319 - Gypsy12_LTR LTR Gypsy -447 1889 1181 7 607 5802 6 31 0 chrUextra 2940442 2941425 -26063231 + DOC2_DM LINE Jockey 2774 3787 -1006 7 607 1703 54 4 28 chrUextra 2941534 2941781 -26062875 - BATUMI_LTR LTR Pao 0 272 32 7 607 1700 132 81 9 chrUextra 2941799 2942144 -26062512 + MDG1_LTR LTR Gypsy 43 412 -30 7 607 1884 159 14 0 chrUextra 2942149 2942508 -26062148 + IDEFIX_I LTR Gypsy 4800 5163 -465 7 607 5097 11 70 5 chrUextra 2942608 2943591 -26061065 - ACCORD2_I LTR Gypsy -1712 5500 4454 7 607 597 335 42 35 chrUextra 2943728 2944564 -26060092 + HMSBEAGLE_I LTR Gypsy 4544 5385 -1144 7 607 821 320 60 35 chrUextra 2944775 2945736 -26058920 + MDG1_I LTR Gypsy 2142 3126 -3470 7 607 2759 180 11 14 chrUextra 2945857 2946840 -26057816 + SAR_DM Satellite Satellite 1 980 -836 7 607 7765 31 7 8 chrUextra 2946940 2947923 -26056733 - MAX_I LTR Pao -1762 6152 5171 7 607 1359 45 0 0 chrUextra 2948341 2948546 -26056110 + (CAATA)n Simple_repeat Simple_repeat 1 205 0 7 607 4278 143 67 31 chrUextra 2949179 2950086 -26054570 - TART LINE telomeric -7824 6653 5714 7 607 775 171 0 38 chrUextra 2950190 2950348 -26054308 - Gypsy12_LTR LTR Gypsy -2184 152 1 7 607 311 328 136 9 chrUextra 2950365 2950601 -26054055 + Ulysses_I LTR Gypsy 5202 5467 -914 7 607 426 308 41 0 chrUextra 2950680 2950875 -26053781 + Ulysses_I LTR Gypsy 5641 5843 -538 7 607 348 236 103 49 chrUextra 2950905 2951128 -26053528 + Ulysses_I LTR Gypsy 5894 6128 -253 7 607 4373 40 61 0 chrUextra 2951272 2952254 -26052402 - MAX_I LTR Pao -960 6954 5913 7 607 624 314 22 26 chrUextra 2952854 2953336 -26051320 + Gypsy4_I LTR Gypsy 2431 2669 -3619 7 607 3226 85 0 7 chrUextra 2953436 2953886 -26050770 - HMSBEAGLE_I LTR Gypsy -2300 4229 3783 7 607 302 243 332 5 chrUextra 2953886 2954073 -26050583 - BS LINE Jockey -2802 2324 2077 7 607 2001 151 0 0 chrUextra 2954084 2954416 -26050240 - HMSBEAGLE_I LTR Gypsy -2721 3808 3477 7 607 617 45 22 11 chrUextra 2954518 2954609 -26050047 + BATUMI_LTR LTR Pao 181 272 0 7 607 5316 0 0 0 chrUextra 2955600 2956209 -26048447 + BEL_I LTR Pao 1093 1701 -3703 7 607 3208 5 0 0 chrUextra 2956209 2956582 -26048074 - TIRANT_LTR LTR Gypsy 0 417 45 7 607 3183 204 13 14 chrUextra 2956689 2957664 -26046992 + SAR_DM Satellite Satellite 1 974 -227 7 607 3771 39 100 0 chrUextra 2957764 2958746 -26045910 + IDEFIX_I LTR Gypsy 2013 3092 -2536 7 607 6137 15 99 1 chrUextra 2958846 2959828 -26044828 + ROO_I LTR Pao 733 1810 -6446 7 607 4470 28 5 2 chrUextra 2959928 2960498 -26044158 - FW_DM LINE Jockey -2929 1763 1228 7 607 2405 11 3 0 chrUextra 2960627 2960910 -26043746 - Gypsy2_LTR LTR Gypsy 0 353 70 7 607 2709 6 0 0 chrUextra 2961010 2961323 -26043333 + R1_DM LINE R1 5044 5356 0 7 607 3178 68 0 0 chrUextra 2961323 2961750 -26042906 + R1_DM LINE R1 1367 1793 -3563 7 607 1374 170 0 0 chrUextra 2961751 2961992 -26042664 + R1_DM LINE R1 310 550 -4806 7 607 4971 7 0 0 chrUextra 2962092 2962691 -26041965 + ROVER-I_DM LTR Gypsy 2110 2708 -3876 7 607 3216 5 0 0 chrUextra 2962694 2963074 -26041582 + ROVER-I_DM LTR Gypsy 3036 3415 -3169 7 607 7882 23 3 1 chrUextra 2963174 2964156 -26040500 + ROO_I LTR Pao 3799 4782 -3474 7 607 1431 38 0 0 chrUextra 2964660 2964977 -26039679 + (TCTTG)n Simple_repeat Simple_repeat 1 317 0 7 607 1452 6 6 6 chrUextra 2965338 2965515 -26039141 + Copia_I LTR Copia 4417 4593 0 7 607 2186 18 0 0 chrUextra 2965515 2965791 -26038865 + Copia_LTR LTR Copia 1 276 0 7 607 232 0 0 0 chrUextra 2965791 2965825 -26038831 + Copia_LTR LTR Copia 243 276 0 7 607 3834 18 2 8 chrUextra 2965825 2966320 -26038336 + PROTOP_A DNA P 551 1042 -63 7 607 7629 31 34 1 chrUextra 2966420 2967399 -26037257 - R1_DM LINE R1 -1711 3645 2635 7 607 445 18 0 0 chrUextra 2967502 2967559 -26037097 + DOC5_DM LINE Jockey 4595 4651 -31 7 607 260 0 57 0 chrUextra 2967559 2967594 -26037062 + (TATAA)n Simple_repeat Simple_repeat 5 41 0 7 607 293 274 39 24 chrUextra 2968585 2968712 -26035944 - XDMR Unknown Unknown -232 129 1 7 607 3610 202 14 20 chrUextra 2968602 2969565 -26035091 + SAR_DM Satellite Satellite 246 1202 -270 7 607 23 0 0 0 chrUextra 2969705 2969728 -26034928 + AT_rich Low_complexity Low_complexity 1 23 0 7 607 2434 192 12 10 chrUextra 2970747 2971727 -26032929 + SAR_DM Satellite Satellite 1 982 -645 7 607 4600 10 33 3 chrUextra 2971832 2972409 -26032247 - IDEFIX_LTR LTR Gypsy 0 594 1 7 607 450 49 0 0 chrUextra 2972409 2972470 -26032186 + (TA)n Simple_repeat Simple_repeat 2 62 0 7 607 733 104 8 0 chrUextra 2972908 2973033 -26031623 - ARS406_DM Unknown Unknown -227 126 1 7 607 3490 196 11 21 chrUextra 2972937 2973875 -26030781 + SAR_DM Satellite Satellite 192 1119 -353 7 607 332 172 20 20 chrUextra 2973788 2973889 -26030767 - XDMR_DM Unknown Unknown 0 360 260 7 607 2413 108 19 28 chrUextra 2973989 2974968 -26029688 - DMSAT6 Satellite Satellite -72 970 1 7 607 3744 183 19 22 chrUextra 2975073 2976049 -26028607 + SAR_DM Satellite Satellite 65 1037 -435 7 607 661 143 57 25 chrUextra 2976209 2976367 -26028289 - DNAREP1_DM LINE Penelope -415 179 17 7 607 3590 195 12 16 chrUextra 2977232 2978213 -26026443 - SAR_DM Satellite Satellite -435 976 1 7 607 5206 10 2 0 chrUextra 2978313 2978931 -26025725 - FW_DM LINE Jockey -4073 619 1 7 607 2779 29 0 0 chrUextra 2978945 2979294 -26025362 + STALKER4_I LTR Gypsy 2748 3096 -3434 7 607 3123 26 0 0 chrUextra 2979418 2979797 -26024859 - STALKER4_LTR LTR Gypsy -23 379 1 7 607 403 304 16 16 chrUextra 2979804 2979991 -26024665 + MICROPIA_I LTR Gypsy 301 487 -3989 7 607 431 356 30 0 chrUextra 2980066 2980364 -26024292 + MICROPIA_I LTR Gypsy 1211 1517 -2959 7 607 4663 4 0 0 chrUextra 2980475 2981012 -26023644 + BS2 LINE Jockey 4185 4721 0 7 607 261 0 0 0 chrUextra 2981021 2981050 -26023606 + (A)n Simple_repeat Simple_repeat 1 29 0 7 607 432 87 43 0 chrUextra 2981051 2981120 -26023536 + IDEFIX_I LTR Gypsy 1430 1501 -4127 7 607 1573 129 116 3 chrUextra 2981154 2981456 -26023200 + IDEFIX_I LTR Gypsy 2442 2777 -2851 7 607 783 32 0 0 chrUextra 2981556 2981651 -26023005 - LSU-rRNA_Dme rRNA rRNA -1228 2672 2578 7 607 7694 3 14 0 chrUextra 2981647 2982537 -26022119 - R2_DM LINE R2 -6 3601 2700 7 607 4389 10 0 0 chrUextra 2983718 2984238 -26020418 + FW_DM LINE Jockey 4169 4688 -4 7 607 1896 128 50 25 chrUextra 2984243 2984699 -26019957 - STALKER4_I LTR Gypsy -5618 912 396 7 607 1290 6 0 18 chrUextra 2984877 2985042 -26019614 - NTS_DM Other Other -78 162 1 7 607 1847 4 17 13 chrUextra 2985042 2985281 -26019375 - NTS_DM Other Other 0 240 1 7 607 1836 8 17 13 chrUextra 2985281 2985520 -26019136 - NTS_DM Other Other 0 240 1 7 607 1659 34 17 21 chrUextra 2985520 2985761 -26018895 - NTS_DM Other Other 0 240 1 7 607 339 292 0 0 chrUextra 2986303 2986409 -26018247 + Copia2_I LTR Copia 567 672 -3490 7 607 1131 38 0 37 chrUextra 2986961 2987123 -26017533 - BATUMI_LTR LTR Pao -85 187 32 7 607 3239 206 60 4 chrUextra 2987139 2987942 -26016714 + ROVER-I_DM LTR Gypsy 3241 4088 -2496 7 607 3620 88 2 24 chrUextra 2988042 2988590 -26016066 + Gypsy12_I LTR Gypsy 1019 1554 -3992 7 607 2102 111 12 12 chrUextra 2988597 2988916 -26015740 + Gypsy12_I LTR Gypsy 1503 1821 -3725 7 607 592 91 236 0 chrUextra 2988913 2989023 -26015633 + Gypsy12_I LTR Gypsy 4465 4600 -946 7 607 2187 103 8 53 chrUextra 2989136 2989628 -26015028 + DMSAT6 Satellite Satellite 1 470 0 7 607 2323 92 18 22 chrUextra 2989648 2990104 -26014552 + DMSAT6 Satellite Satellite 17 470 0 7 607 237 65 0 0 chrUextra 2990534 2990565 -26014091 + (TTG)n Simple_repeat Simple_repeat 2 32 0 7 607 1615 77 0 0 chrUextra 2990779 2991001 -26013655 + Gypsy12_I LTR Gypsy 2449 2670 -2876 7 607 1264 101 0 26 chrUextra 2990992 2991185 -26013471 + Gypsy12_I LTR Gypsy 2811 2998 -2548 7 607 2352 242 78 51 chrUextra 2991285 2992232 -26012424 + Gypsy12_LTR LTR Gypsy 106 1078 -1258 7 607 694 108 0 0 chrUextra 2992871 2992973 -26011683 - STALKER4_LTR LTR Gypsy -15 387 286 7 607 2886 17 0 16 chrUextra 2992968 2993336 -26011320 - STALKER4_I LTR Gypsy -5105 1425 1064 7 607 3909 48 0 0 chrUextra 2993447 2993950 -26010706 - FW_DM LINE Jockey -4187 505 3 7 607 1189 280 11 23 chrUextra 2993949 2994384 -26010272 + Gypsy_I LTR Gypsy 4312 4741 -1766 7 607 1227 92 184 0 chrUextra 2994527 2994766 -26009890 + TAHRE LINE telomeric 7557 7839 -6638 7 607 2126 126 122 47 chrUextra 2994766 2995506 -26009150 + TAHRE LINE telomeric 10013 10451 -12 7 607 385 254 0 0 chrUextra 2996719 2996837 -26007819 + MDG3_I LTR Gypsy 3522 3639 -1347 7 607 1105 310 19 7 chrUextra 2996852 2997391 -26007265 + MDG3_I LTR Gypsy 3693 4237 -749 7 607 875 62 189 114 chrUextra 2997466 2997667 -26006989 + STALKER4_LTR LTR Gypsy 69 284 -118 7 607 4651 49 98 4 chrUextra 2997767 2998731 -26005925 + PROTOP DNA P 949 2002 -2478 7 607 525 307 43 13 chrUextra 2998883 2999117 -26005539 - Copia2_I LTR Copia -758 3404 3164 7 607 2346 135 185 0 chrUextra 2999248 2999826 -26004830 + DMRT1B LINE R1 1492 2176 -3007 7 607 480 0 17 0 chrUextra 2999927 2999987 -26004669 - DM1731_I LTR Copia -3915 61 1 7 607 2738 28 0 0 chrUextra 3000000 3000323 -26004333 - DM1731_LTR LTR Copia -13 323 1 7 607 3956 35 39 0 chrUextra 3000323 3000811 -26003845 - PROTOP DNA P -3973 507 1 7 607 714 11 115 7 chrUextra 3001012 3001580 -26003076 + (TA)n Simple_repeat Simple_repeat 1 629 0 7 607 2749 45 0 0 chrUextra 3001582 3001918 -26002738 + DM1731_LTR LTR Copia 1 336 0 7 607 549 15 15 0 chrUextra 3001918 3001985 -26002671 + DM1731_I LTR Copia 1 68 -3908 7 607 3735 189 24 28 chrUextra 3002088 3003067 -26001589 - SAR_DM Satellite Satellite -836 975 1 7 607 7580 47 15 4 chrUextra 3003174 3004146 -26000510 + IDEFIX_I LTR Gypsy 2429 3411 -2217 7 607 379 324 44 25 chrUextra 3004851 3005215 -25999441 + BURDOCK_I LTR Gypsy 850 1561 -4574 7 607 3964 194 25 18 chrUextra 3005327 3006301 -25998355 + SAR_DM Satellite Satellite 249 1229 -243 7 607 1903 9 0 0 chrUextra 3006407 3006619 -25998037 + LSU-rRNA_Dme rRNA rRNA 3689 3900 0 7 607 262 150 0 0 chrUextra 3006728 3006768 -25997888 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 607 262 150 0 0 chrUextra 3006820 3006860 -25997796 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 607 262 150 0 0 chrUextra 3006912 3006952 -25997704 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 607 253 150 0 0 chrUextra 3007004 3007044 -25997612 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 607 262 150 0 0 chrUextra 3007096 3007136 -25997520 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 607 253 150 0 0 chrUextra 3007188 3007228 -25997428 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 607 262 150 0 0 chrUextra 3007280 3007320 -25997336 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 607 846 17 32 24 chrUextra 3007487 3007610 -25997046 + NTS_DM Other Other 117 240 0 7 607 1901 13 17 13 chrUextra 3007610 3007849 -25996807 + NTS_DM Other Other 1 240 0 7 607 1222 13 0 26 chrUextra 3007849 3008004 -25996652 + NTS_DM Other Other 1 151 -89 7 607 615 11 0 33 chrUextra 3007999 3008090 -25996566 + NTS_DM Other Other 75 162 -78 7 607 489 131 36 0 chrUextra 3008200 3008284 -25996372 + NTS_DM Other Other 4 90 -150 7 607 2397 83 32 20 chrUextra 3008613 3009029 -25995627 - Gypsy6A_LTR LTR Gypsy 0 420 1 7 607 4527 6 31 0 chrUextra 3009031 3009547 -25995109 - Gypsy6_I LTR Gypsy 0 7012 6481 7 607 2776 133 8 23 chrUextra 3009647 3010132 -25994524 + TAHRE LINE telomeric 9974 10451 -12 7 607 2994 155 0 0 chrUextra 3010130 3010627 -25994029 + HETA LINE telomeric 2709 3205 -2876 7 607 6911 46 19 1 chrUextra 3010744 3011624 -25993032 + DIVER2_I LTR Pao 1547 2442 -1705 7 607 3541 197 67 20 chrUextra 3011809 3012752 -25991904 + SAR_DM Satellite Satellite 278 1264 -208 7 607 970 62 0 0 chrUextra 3012655 3012785 -25991871 - ARS406_DM Unknown Unknown -164 189 60 7 607 8083 32 8 7 chrUextra 3012887 3013867 -25990789 - R1_DM LINE R1 -3604 1752 772 7 75 8497 5 37 1 chrUextra 3013967 3014947 -25989709 + G2_DM LINE Jockey 1491 2505 -597 7 608 8877 1 2 2 chrUextra 3015047 3016027 -25988629 + SSU-rRNA_Dme rRNA rRNA 928 1907 -88 7 608 4670 29 9 9 chrUextra 3016127 3016685 -25987971 - BATUMI_I LTR Pao -1740 6223 5666 7 608 459 52 0 0 chrUextra 3016686 3016744 -25987912 - DMCR1A LINE CR1 -3331 1139 1082 7 608 1041 307 36 28 chrUextra 3017216 3017719 -25986937 - HMSBEAGLE_I LTR Gypsy -900 5629 5123 7 608 286 291 88 73 chrUextra 3017765 3018173 -25986483 - HMSBEAGLE_I LTR Gypsy -1575 4954 4541 7 608 3644 19 0 0 chrUextra 3018286 3018703 -25985953 - ROO_I LTR Pao -795 7461 7045 7 608 4775 12 2 0 chrUextra 3018701 3019265 -25985391 - ROO_I LTR Pao -1382 6874 6310 7 608 1645 190 163 57 chrUextra 3019365 3019911 -25984745 + HETA LINE telomeric 5307 5910 -171 7 608 27 49 0 0 chrUextra 3019921 3019962 -25984694 + AT_rich Low_complexity Low_complexity 1 41 0 7 608 2733 86 21 12 chrUextra 3020451 3021423 -25983233 - DMSAT6 Satellite Satellite -3 980 1 7 608 3683 189 18 20 chrUextra 3021532 3022430 -25982226 + SAR_DM Satellite Satellite 369 1264 -208 7 608 573 28 0 0 chrUextra 3022430 3022502 -25982154 - ARS406_DM Unknown Unknown -195 158 87 7 608 534 43 0 0 chrUextra 3022602 3022671 -25981985 + (TTCTC)n Simple_repeat Simple_repeat 5 73 0 7 608 560 59 0 12 chrUextra 3022671 3022756 -25981900 + (AGATG)n Simple_repeat Simple_repeat 3 87 0 7 608 1620 37 0 2 chrUextra 3022763 3023304 -25981352 + (GAGAA)n Simple_repeat Simple_repeat 1 539 0 7 608 3828 197 19 21 chrUextra 3023684 3024652 -25980004 - SAR_DM Satellite Satellite -261 1211 246 7 608 8155 18 38 0 chrUextra 3024760 3025736 -25978920 - DOC2_DM LINE Jockey -2649 2144 1132 7 608 3261 5 0 5 chrUextra 3025839 3026226 -25978430 + DOC LINE Jockey 4341 4725 0 7 608 277 208 73 24 chrUextra 3026203 3026326 -25978330 + Gypsy12A_LTR LTR Gypsy 1599 1727 -553 7 608 3160 76 13 36 chrUextra 3026340 3026818 -25977838 + Gypsy12_I LTR Gypsy 1 467 -5079 7 608 1054 60 40 0 chrUextra 3026918 3027069 -25977587 - BATUMI_I LTR Pao -1380 6583 6427 7 608 2488 62 0 3 chrUextra 3027092 3027431 -25977225 + BATUMI_I LTR Pao 7303 7640 -323 7 608 1475 62 0 10 chrUextra 3027430 3027626 -25977030 + BATUMI_I LTR Pao 7770 7963 0 7 608 1409 52 134 19 chrUextra 3027648 3027864 -25976792 + BATUMI_LTR LTR Pao 32 272 0 7 608 4483 20 29 0 chrUextra 3027997 3028591 -25976065 + STALKER4_I LTR Gypsy 5920 6530 0 7 608 3188 29 0 5 chrUextra 3028591 3028972 -25975684 + STALKER4_LTR LTR Gypsy 1 379 -23 7 608 2513 123 14 20 chrUextra 3030155 3030594 -25974062 + TAHRE LINE telomeric 10020 10455 -8 7 608 1928 177 31 60 chrUextra 3030593 3031131 -25973525 + HETA LINE telomeric 3244 3704 -2377 7 608 8121 9 8 1 chrUextra 3032317 3033292 -25971364 - Invader2_I LTR Gypsy -2152 2440 1459 7 608 3926 187 16 25 chrUextra 3033393 3034363 -25970293 + SAR_DM Satellite Satellite 212 1172 -300 7 608 2269 12 0 4 chrUextra 3034471 3034728 -25969928 + STALKER4_LTR LTR Gypsy 147 402 0 7 608 345 25 0 0 chrUextra 3034728 3034755 -25969901 + STALKER4_I LTR Gypsy 1 27 -6503 7 608 306 105 0 50 chrUextra 3034755 3034815 -25969841 + Stalker2_I LTR Gypsy 1 57 -7345 7 608 3691 5 0 0 chrUextra 3035041 3035450 -25969206 + STALKER4_I LTR Gypsy 3991 4399 -2131 7 608 1978 59 11 15 chrUextra 3035550 3035810 -25968846 - G5A_DM LINE Jockey -479 2362 2104 7 608 5381 32 46 0 chrUextra 3035809 3036529 -25968127 + DMCR1A LINE CR1 347 1099 -3371 7 608 2036 122 78 0 chrUextra 3036629 3036964 -25967692 + IDEFIX_I LTR Gypsy 3860 4220 -1408 7 608 1404 139 87 21 chrUextra 3036977 3037264 -25967392 + IDEFIX_I LTR Gypsy 4854 5159 -469 7 608 869 47 0 0 chrUextra 3037293 3037399 -25967257 - DMTOM1_LTR LTR Gypsy -304 106 1 7 608 611 199 15 0 chrUextra 3037399 3037517 -25967139 - ZAM_I LTR Gypsy -6843 647 528 7 608 3699 189 39 31 chrUextra 3037715 3038687 -25965969 + SAR_DM Satellite Satellite 57 1036 -436 7 608 536 128 54 18 chrUextra 3038788 3038899 -25965757 - ARS406_DM Unknown Unknown -238 115 1 7 608 3711 185 26 25 chrUextra 3038813 3039766 -25964890 + SAR_DM Satellite Satellite 198 1151 -321 7 608 6007 30 24 13 chrUextra 3039866 3040845 -25963811 - Invader4_I LTR Gypsy -104 2309 1252 7 608 455 29 0 42 chrUextra 3040945 3041013 -25963643 - BATUMI_I LTR Pao -897 7066 7002 7 608 5444 14 21 6 chrUextra 3041013 3041669 -25962987 - BATUMI_I LTR Pao 0 7963 7298 7 608 1889 30 13 0 chrUextra 3041687 3041924 -25962732 + BATUMI_I LTR Pao 6427 6666 -1297 7 608 8332 24 10 0 chrUextra 3042024 3043003 -25961653 + R1_DM LINE R1 4039 5027 -329 7 608 1879 193 5 5 chrUextra 3043104 3043520 -25961136 - SAR_DM Satellite Satellite -561 911 496 7 608 1917 181 4 9 chrUextra 3043535 3043950 -25960706 - SAR_DM Satellite Satellite -569 542 41 7 608 777 60 0 0 chrUextra 3043950 3044050 -25960606 + ARS406_DM Unknown Unknown 90 189 -164 7 608 1917 181 4 9 chrUextra 3044050 3044081 -25960575 - SAR_DM Satellite Satellite -569 40 1 7 608 727 111 0 8 chrUextra 3044182 3044300 -25960356 - ARS406_DM Unknown Unknown -236 117 1 7 608 3939 181 13 27 chrUextra 3044206 3045143 -25959513 + SAR_DM Satellite Satellite 195 1118 -354 7 608 378 206 0 19 chrUextra 3045057 3045161 -25959495 - XDMR_DM Unknown Unknown 0 360 259 7 608 2350 7 62 0 chrUextra 3045261 3045550 -25959106 - IDEFIX_LTR LTR Gypsy -287 307 1 7 608 5548 10 35 1 chrUextra 3045550 3046238 -25958418 - IDEFIX_I LTR Gypsy 0 5628 4918 7 608 699 65 0 0 chrUextra 3046341 3046433 -25958223 + TART LINE telomeric 10572 10663 -3814 7 608 4133 62 3 24 chrUextra 3046432 3047024 -25957632 + TART LINE telomeric 630 1209 -13268 7 608 2223 32 42 24 chrUextra 3047024 3047311 -25957345 + PROTOP_A DNA P 1 292 -813 7 608 4103 39 86 0 chrUextra 3047418 3047962 -25956694 + QUASIMODO_I LTR Gypsy 2312 2902 -3158 7 608 3320 46 2 0 chrUextra 3047956 3048394 -25956262 + QUASIMODO_I LTR Gypsy 3168 3606 -2454 7 608 1554 11 0 0 chrUextra 3048892 3049072 -25955584 + (ATAAG)n Simple_repeat Simple_repeat 1 180 0 7 608 333 62 0 0 chrUextra 3049074 3049122 -25955534 + (GAGAA)n Simple_repeat Simple_repeat 4 51 0 7 608 303 25 0 0 chrUextra 3049122 3049162 -25955494 + MDG3_LTR LTR Gypsy 1 40 -227 7 608 1779 14 0 9 chrUextra 3049574 3049792 -25954864 + FW_DM LINE Jockey 4477 4692 0 7 608 3377 177 12 13 chrUextra 3049803 3050552 -25954104 + SAR_DM Satellite Satellite 326 1073 -399 7 608 1158 123 0 0 chrUextra 3050652 3050888 -25953768 + (TA)n Simple_repeat Simple_repeat 1 236 0 7 608 1387 11 17 17 chrUextra 3050901 3051079 -25953577 - DM297_LTR LTR Gypsy -236 178 1 7 608 3061 105 83 0 chrUextra 3051077 3051592 -25953064 - DM176_I LTR Gypsy 0 6420 5863 7 608 410 75 0 0 chrUextra 3051577 3051630 -25953026 - DM297_I LTR Gypsy -1660 4507 4455 7 608 4585 2 0 0 chrUextra 3051732 3052239 -25952417 - FW_DM LINE Jockey -4185 507 1 7 608 2853 41 126 35 chrUextra 3052255 3052708 -25951948 + ROO_I LTR Pao 285 778 -7478 7 608 4263 14 27 2 chrUextra 3052809 3053324 -25951332 + IDEFIX_LTR LTR Gypsy 67 594 0 7 608 401 73 19 0 chrUextra 3053324 3053396 -25951260 + MDG1_I LTR Gypsy 6543 6596 0 7 608 234 202 81 23 chrUextra 3053387 3053473 -25951183 + TABOR_LTR LTR Gypsy 1 91 -415 7 608 6946 110 5 1 chrUextra 3053887 3054864 -25949792 - HMSBEAGLE_I LTR Gypsy -2034 4495 3515 7 608 22 56 0 0 chrUextra 3054998 3055034 -25949622 + AT_rich Low_complexity Low_complexity 1 36 0 7 608 362 191 25 83 chrUextra 3055079 3055199 -25949457 + Copia_I LTR Copia 4401 4513 -80 7 608 502 269 72 9 chrUextra 3056512 3056733 -25947923 - MICROPIA_I LTR Gypsy -886 3590 3356 7 608 308 315 25 15 chrUextra 3056815 3057018 -25947638 + Gypsy10_I LTR Gypsy 2223 2427 -2851 7 608 353 335 37 46 chrUextra 3057768 3058098 -25946558 + Gypsy6_I LTR Gypsy 2920 3547 -2982 7 608 1656 18 13 18 chrUextra 3058199 3058424 -25946232 - NTS_DM Other Other -16 224 1 7 608 1408 20 20 20 chrUextra 3058424 3058627 -25946029 - NTS_DM Other Other 0 240 38 7 608 3367 5 7 7 chrUextra 3058642 3059056 -25945600 + DM297_LTR LTR Gypsy 1 414 0 7 608 954 17 8 0 chrUextra 3059056 3059176 -25945480 + DM297_I LTR Gypsy 1 121 -6046 7 608 2493 191 10 9 chrUextra 3059277 3060250 -25944406 - SAR_DM Satellite Satellite -645 973 1 7 608 3676 193 14 20 chrUextra 3060362 3061328 -25943328 - SAR_DM Satellite Satellite -300 1172 212 7 608 4214 34 20 0 chrUextra 3061432 3061968 -25942688 + G2_DM LINE Jockey 2547 3093 -9 7 608 3259 50 0 5 chrUextra 3061969 3062409 -25942247 - G2_DM LINE Jockey -574 2528 2091 7 608 4141 64 0 5 chrUextra 3062510 3063094 -25941562 + IDEFIX_I LTR Gypsy 378 958 -4670 7 608 2962 19 0 58 chrUextra 3063094 3063488 -25941168 + Gypsy3_LTR LTR Gypsy 1 371 -27 7 608 2923 6 0 0 chrUextra 3063588 3063930 -25940726 + STALKER4_I LTR Gypsy 1688 2029 -4501 7 608 5196 17 0 0 chrUextra 3063930 3064566 -25940090 + STALKER4_I LTR Gypsy 2334 2969 -3561 7 608 3464 8 0 0 chrUextra 3064666 3065068 -25939588 - DOC LINE Jockey -4292 433 32 7 608 2377 173 9 22 chrUextra 3065093 3065643 -25939013 - SAR_DM Satellite Satellite -512 960 418 7 608 555 290 68 35 chrUextra 3065766 3066580 -25938076 + TV1I LTR Gypsy 738 1558 -4405 7 608 751 103 8 0 chrUextra 3066821 3066947 -25937709 - ARS406_DM Unknown Unknown -226 127 1 7 608 3702 185 11 21 chrUextra 3066850 3067789 -25936867 + SAR_DM Satellite Satellite 191 1119 -353 7 608 275 188 16 0 chrUextra 3067734 3067798 -25936858 - XDMR Unknown Unknown 0 361 297 7 608 22 35 0 0 chrUextra 3068244 3068273 -25936383 + AT_rich Low_complexity Low_complexity 1 29 0 7 608 40 21 0 0 chrUextra 3068671 3068718 -25935938 + AT_rich Low_complexity Low_complexity 1 47 0 7 608 7822 28 16 1 chrUextra 3068975 3069952 -25934704 - R1_DM LINE R1 -1331 4025 3034 7 608 5405 48 20 90 chrUextra 3070074 3071029 -25933627 + BATUMI_I LTR Pao 1 888 -7075 7 608 673 106 59 7 chrUextra 3071515 3071667 -25932989 + GA-rich Low_complexity Low_complexity 5 164 0 7 608 388 320 17 27 chrUextra 3072643 3072958 -25931698 + BURDOCK_I LTR Gypsy 850 992 -4868 7 608 3574 193 16 18 chrUextra 3073288 3074260 -25930396 - SAR_DM Satellite Satellite -396 969 1 7 608 737 122 0 63 chrUextra 3074485 3074643 -25930013 + Gypsy8_I LTR Gypsy 72 219 -4128 7 608 362 105 0 0 chrUextra 3075280 3075337 -25929319 - DNAREP1_DM LINE Penelope 0 594 538 7 608 3706 186 44 14 chrUextra 3075472 3076408 -25928248 + SAR_DM Satellite Satellite 266 1229 -243 7 608 896 77 42 0 chrUextra 3076578 3076721 -25927935 + I_DM LINE I 4996 5144 -1087 7 608 3372 20 69 0 chrUextra 3076719 3077368 -25927288 + DMCR1A LINE CR1 1291 1984 -2486 7 608 1058 44 0 0 chrUextra 3077356 3077491 -25927165 + DMCR1A LINE CR1 3416 3550 -920 7 608 3771 42 64 0 chrUextra 3077591 3078110 -25926546 + Transib5 DNA Transib 1859 2410 -591 7 608 779 88 18 0 chrUextra 3078113 3078227 -25926429 - DMCR1A LINE CR1 -2 4468 4353 7 608 2442 54 0 12 chrUextra 3078229 3078568 -25926088 - DMCR1A LINE CR1 -236 4234 3900 7 608 7352 55 9 0 chrUextra 3078674 3079645 -25925011 - IDEFIX_I LTR Gypsy -2968 2660 1681 7 608 4319 4 0 0 chrUextra 3079770 3080277 -25924379 - DM176_LTR LTR Gypsy 0 507 1 7 608 3766 0 0 0 chrUextra 3080278 3080712 -25923944 - ACCORD_LTR LTR Gypsy -121 437 4 7 608 471 207 0 0 chrUextra 3080837 3080982 -25923674 + (CATAA)n Simple_repeat Simple_repeat 2 146 0 7 608 555 224 0 4 chrUextra 3080984 3081235 -25923421 + (AATAG)n Simple_repeat Simple_repeat 1 249 0 7 608 288 70 0 0 chrUextra 3081268 3081311 -25923345 + (TATAA)n Simple_repeat Simple_repeat 4 46 0 7 608 1329 80 0 4 chrUextra 3081318 3081799 -25922857 + (AATAG)n Simple_repeat Simple_repeat 1 478 0 7 608 399 216 0 18 chrUextra 3081899 3082012 -25922644 - SAR_DM Satellite Satellite -1170 302 192 7 608 1005 95 0 0 chrUextra 3081916 3082074 -25922582 + ARS406_DM Unknown Unknown 1 158 -195 7 608 3008 187 7 8 chrUextra 3082081 3082794 -25921862 - SAR_DM Satellite Satellite -569 903 192 7 608 692 124 0 0 chrUextra 3082698 3082819 -25921837 + ARS406_DM Unknown Unknown 1 121 -232 7 608 491 29 15 0 chrUextra 3082808 3082876 -25921780 + ARS406_DM Unknown Unknown 78 146 -207 7 608 2403 305 24 12 chrUextra 3083017 3083953 -25920703 - MICROPIA_I LTR Gypsy -1261 3215 2269 7 608 543 41 0 0 chrUextra 3084256 3084353 -25920303 + (TTTA)n Simple_repeat Simple_repeat 1 97 0 7 608 1545 36 0 0 chrUextra 3084353 3084683 -25919973 + (TAAA)n Simple_repeat Simple_repeat 1 330 0 7 608 2889 6 0 0 chrUextra 3084692 3085029 -25919627 + STALKER4_LTR LTR Gypsy 1 337 -65 7 608 2066 0 0 16 chrUextra 3085129 3085378 -25919278 + Copia_I LTR Copia 4349 4593 0 7 608 2286 4 0 0 chrUextra 3085378 3085654 -25919002 + Copia_LTR LTR Copia 1 276 0 7 608 3845 13 0 0 chrUextra 3085654 3086105 -25918551 - MDG3_I LTR Gypsy -4196 790 340 7 608 2765 37 0 0 chrUextra 3086205 3086554 -25918102 + DOC3_DM LINE Jockey 2721 3069 -1671 7 608 1348 53 0 21 chrUextra 3086553 3086747 -25917909 - DMCR1A LINE CR1 -4279 191 2 7 608 1443 61 142 0 chrUextra 3087281 3087577 -25917079 + TART LINE telomeric 2181 2518 -11959 7 608 3858 15 2 0 chrUextra 3087580 3088045 -25916611 + PROTOP_A DNA P 1 466 -639 7 608 1856 5 0 0 chrUextra 3088045 3088257 -25916399 - PROTOP DNA P 0 4480 4269 7 608 3501 154 85 89 chrUextra 3088357 3089333 -25915323 + BATUMI_I LTR Pao 4682 5653 -2310 7 608 2599 159 96 7 chrUextra 3089458 3090306 -25914350 - DM176_I LTR Gypsy -1748 4672 3704 7 608 523 107 0 0 chrUextra 3090334 3090409 -25914247 - DM176_I LTR Gypsy -2814 3606 3532 7 608 2291 50 85 0 chrUextra 3090509 3090828 -25913828 + Baggins1 LINE LOA 5092 5437 -16 7 608 379 311 0 0 chrUextra 3091293 3091441 -25913215 + DIVER_I LTR Pao 4689 4836 -807 7 608 5629 22 0 154 chrUextra 3091585 3092561 -25912095 + MDG3_I LTR Gypsy 1213 2038 -2948 7 608 5823 106 4 6 chrUextra 3094813 3095789 -25908867 + BATUMI_I LTR Pao 4311 5282 -2632 7 608 7397 55 7 2 chrUextra 3095889 3096865 -25907791 - BS2 LINE Jockey -147 4574 3594 7 608 3713 176 16 14 chrUextra 3096975 3097941 -25906715 - SAR_DM Satellite Satellite -431 968 1 7 608 186 133 0 0 chrUextra 3098067 3098097 -25906559 + (CTG)n Simple_repeat Simple_repeat 3 32 0 7 608 661 188 78 58 chrUextra 3099182 3099425 -25905231 + STALKER4_I LTR Gypsy 885 1132 -5398 7 608 5202 35 0 0 chrUextra 3099442 3100093 -25904563 + FW_DM LINE Jockey 4 654 -4038 7 608 2383 115 18 13 chrUextra 3100196 3101169 -25903487 + DMSAT6 Satellite Satellite 1 976 -152 7 608 3379 5 0 0 chrUextra 3101269 3101666 -25902990 + DM176_LTR LTR Gypsy 111 507 0 7 608 3220 84 14 10 chrUextra 3101675 3102180 -25902476 + ACCORD2_I LTR Gypsy 1863 2369 -4843 7 608 412 109 0 0 chrUextra 3102181 3102245 -25902411 + ACCORD2_I LTR Gypsy 2676 2739 -4473 7 608 4574 2 0 0 chrUextra 3102345 3102879 -25901777 - FW_DM LINE Jockey -1265 3427 2894 7 608 3723 9 2 0 chrUextra 3102877 3103320 -25901336 + DOC LINE Jockey 2712 3155 -1570 7 608 377 204 9 18 chrUextra 3103425 3103535 -25901121 + XDMR_DM Unknown Unknown 252 360 0 7 608 3566 186 9 16 chrUextra 3103449 3104386 -25900270 - SAR_DM Satellite Satellite -353 931 1 7 608 3738 7 9 9 chrUextra 3104495 3104961 -25899695 + DOC LINE Jockey 4257 4722 -3 7 608 2147 260 0 0 chrUextra 3104954 3105470 -25899186 + Gypsy6_I LTR Gypsy 3770 4285 -2727 7 608 3515 195 54 14 chrUextra 3105572 3106535 -25898121 + SAR_DM Satellite Satellite 230 1230 -242 7 608 533 68 0 0 chrUextra 3106472 3106545 -25898111 - ARS406_DM Unknown Unknown -164 189 117 7 608 3581 24 0 0 chrUextra 3106647 3107073 -25897583 - R2_DM LINE R2 -1250 2357 1932 7 608 3551 36 41 2 chrUextra 3107095 3107563 -25897093 - R1_DM LINE R1 -69 5287 4802 7 608 464 17 0 17 chrUextra 3107561 3107620 -25897036 - LSU-rRNA_Dme rRNA rRNA -1245 2655 2598 7 608 2834 31 0 6 chrUextra 3107720 3108073 -25896583 + R1_DM LINE R1 5006 5356 0 7 608 4259 57 2 22 chrUextra 3108106 3108695 -25895961 + R1_DM LINE R1 1 577 -4779 7 608 335 296 19 19 chrUextra 3109509 3109671 -25894985 + MDG3_I LTR Gypsy 3263 3424 -1562 7 608 2596 111 26 10 chrUextra 3110945 3111920 -25892736 + DMSAT6 Satellite Satellite 1 990 -64 7 608 584 342 61 34 chrUextra 3112225 3112927 -25891729 + Invader3_I LTR Gypsy 2309 3029 -1859 7 608 2318 120 22 0 chrUextra 3113102 3113470 -25891186 + DMRT1C LINE R1 2786 3161 -2282 7 608 1610 65 5 0 chrUextra 3113455 3113655 -25891001 + DMRT1C LINE R1 3923 4123 -1320 7 608 2771 63 57 5 chrUextra 3113652 3114036 -25890620 + DMRT1C LINE R1 4364 4767 -676 7 608 4838 29 12 8 chrUextra 3114451 3115037 -25889619 + DMCR1A LINE CR1 4 591 -3879 7 608 960 26 0 0 chrUextra 3115032 3115145 -25889511 + DMCR1A LINE CR1 1198 1310 -3160 7 608 2946 95 2 19 chrUextra 3115245 3115674 -25888982 + Gypsy12_I LTR Gypsy 149 570 -4976 7 608 3071 102 20 53 chrUextra 3115702 3116209 -25888447 + Gypsy12_LTR LTR Gypsy 1847 2336 0 7 608 1685 278 7 7 chrUextra 3116320 3116878 -25887778 + Copia_I LTR Copia 1722 2279 -2314 7 608 426 197 0 0 chrUextra 3117149 3117220 -25887436 + HETA LINE telomeric 4533 4603 -1478 7 608 5497 20 52 5 chrUextra 3117395 3118370 -25886286 - BATUMI_I LTR Pao -1715 6248 5228 7 608 4206 200 11 22 chrUextra 3118470 3119423 -25885233 + SAR_DM Satellite Satellite 1 942 -217 7 608 8182 29 29 0 chrUextra 3119545 3120520 -25884136 - FW_DM LINE Jockey -1247 3445 2443 7 608 5169 23 2 2 chrUextra 3120625 3121227 -25883429 - R1_DM LINE R1 -1454 3902 3301 7 608 2974 56 0 5 chrUextra 3121220 3121595 -25883061 - R1_DM LINE R1 -4745 611 239 7 608 62 26 0 0 chrUextra 3122136 3122212 -25882444 + AT_rich Low_complexity Low_complexity 1 76 0 7 608 22 35 0 0 chrUextra 3122505 3122534 -25882122 + AT_rich Low_complexity Low_complexity 1 29 0 7 608 564 54 0 0 chrUextra 3122770 3122844 -25881812 - ACCORD2_I LTR Gypsy -559 6653 6580 7 608 3545 58 68 0 chrUextra 3122834 3123402 -25881254 - ACCORD2_I LTR Gypsy -4186 3026 2420 7 608 762 113 59 53 chrUextra 3123404 3123591 -25881065 - ACCORD2_I LTR Gypsy -5160 2052 1865 7 608 3796 26 46 0 chrUextra 3123845 3124300 -25880356 - PROTOP_A DNA P -629 476 1 7 608 1475 0 0 0 chrUextra 3124920 3125079 -25879577 - LSU-rRNA_Dme rRNA rRNA -3741 159 1 7 608 21 95 0 0 chrUextra 3125091 3125154 -25879502 + AT_rich Low_complexity Low_complexity 1 63 0 7 608 34 24 0 0 chrUextra 3125367 3125408 -25879248 + AT_rich Low_complexity Low_complexity 1 41 0 7 608 4784 2 2 0 chrUextra 3125995 3126518 -25878138 - FW_DM LINE Jockey -3500 1192 669 7 608 3010 0 0 0 chrUextra 3126511 3126835 -25877821 + R1_DM LINE R1 5033 5356 0 7 608 1256 7 0 0 chrUextra 3126833 3126970 -25877686 + LSU-rRNA_Dme rRNA rRNA 2640 2776 -1124 7 608 1827 98 11 30 chrUextra 3127070 3127334 -25877322 + Gypsy12_I LTR Gypsy 4710 4968 -578 7 608 793 78 252 14 chrUextra 3127326 3127465 -25877191 + Gypsy12_I LTR Gypsy 5305 5476 -70 7 608 1055 275 28 89 chrUextra 3127481 3128044 -25876612 + Gypsy12_LTR LTR Gypsy 475 1003 -1333 7 608 8462 25 11 0 chrUextra 3128145 3129120 -25875536 + R1_DM LINE R1 1619 2604 -2752 7 608 2946 15 0 0 chrUextra 3129220 3129559 -25875097 + Copia2_I LTR Copia 3824 4162 0 7 608 1820 0 0 0 chrUextra 3129559 3129757 -25874899 + Copia2_LTR_DM LTR Copia 1 198 0 7 608 3594 11 0 2 chrUextra 3129757 3130195 -25874461 + Copia2_I LTR Copia 1 487 -3675 7 608 230 274 24 12 chrUextra 3130883 3130968 -25873688 + Gypsy_DS LTR Gypsy 1361 1446 -6076 7 608 332 343 0 0 chrUextra 3131116 3131259 -25873397 + Gypsy7_I LTR Gypsy 782 924 -4060 7 608 23 68 0 0 chrUextra 3131802 3131846 -25872810 + AT_rich Low_complexity Low_complexity 1 44 0 7 608 26 0 0 0 chrUextra 3132881 3132907 -25871749 + AT_rich Low_complexity Low_complexity 1 26 0 7 608 2431 7 0 0 chrUextra 3133014 3133290 -25871366 - Copia_LTR LTR Copia 0 276 1 7 608 1205 0 0 0 chrUextra 3133290 3133419 -25871237 - Copia_I LTR Copia 0 4593 4465 7 608 2957 3 0 0 chrUextra 3133519 3133840 -25870816 - FW_DM LINE Jockey -4371 321 1 7 608 2408 39 3 17 chrUextra 3133848 3134174 -25870482 + PROTOP_A DNA P 742 1104 -1 7 608 1819 15 0 0 chrUextra 3134292 3134493 -25870163 + PROTOP_A DNA P 1 201 -904 7 608 3050 119 17 21 chrUextra 3134593 3135567 -25869089 - ROVER-I_DM LTR Gypsy -621 5963 4576 7 608 2545 4 4 0 chrUextra 3135668 3135946 -25868710 - FW_DM LINE Jockey -4413 279 1 7 608 2121 0 0 4 chrUextra 3135957 3136202 -25868454 + POGO DNA Pogo 1871 2114 -7 7 608 999 39 0 0 chrUextra 3136202 3136330 -25868326 + (TATAA)n Simple_repeat Simple_repeat 1 128 0 7 608 1620 0 0 0 chrUextra 3136332 3136641 -25868015 + (TTCTC)n Simple_repeat Simple_repeat 1 309 0 7 608 1468 6 0 12 chrUextra 3136743 3136910 -25867746 - CIRCE LINE Composite -2675 3681 3517 7 608 6304 80 16 0 chrUextra 3136910 3137715 -25866941 + Gypsy12_I LTR Gypsy 2975 3792 -1754 7 608 540 116 0 0 chrUextra 3137835 3137921 -25866735 + (CTG)n Simple_repeat Simple_repeat 1 86 0 7 608 4330 13 12 21 chrUextra 3137921 3138664 -25865992 - ROO_I LTR Pao -7616 640 1 7 608 1131 8 0 0 chrUextra 3138664 3138789 -25865867 - ROO_LTR LTR Pao 0 428 304 7 608 659 0 0 0 chrUextra 3138889 3138959 -25865697 - NTS_DM Other Other -170 70 1 7 608 1992 4 17 13 chrUextra 3138959 3139198 -25865458 - NTS_DM Other Other 0 240 1 7 608 1946 0 17 21 chrUextra 3139198 3139439 -25865217 - NTS_DM Other Other 0 240 1 7 608 1938 8 17 17 chrUextra 3139439 3139679 -25864977 - NTS_DM Other Other 0 240 1 7 608 1324 22 22 22 chrUextra 3139679 3139863 -25864793 - NTS_DM Other Other 0 240 57 7 608 3329 35 0 0 chrUextra 3139963 3140360 -25864296 - MAX_I LTR Pao -4639 3275 2879 7 608 2011 78 3 21 chrUextra 3141059 3141349 -25863307 + PROTOP_A DNA P 194 478 -627 7 608 1730 85 0 0 chrUextra 3141326 3141561 -25863095 + HOBO DNA hAT 330 564 -2452 7 608 3467 68 2 7 chrUextra 3141553 3142011 -25862645 + HOBO DNA hAT 385 840 -2176 7 608 1620 29 0 2 chrUextra 3142111 3143085 -25861571 + (G)n Simple_repeat Simple_repeat 1 972 0 7 608 4757 2 0 2 chrUextra 3143185 3143705 -25860951 + R1_DM LINE R1 4838 5356 0 7 608 4234 2 0 0 chrUextra 3143703 3144159 -25860497 + LSU-rRNA_Dme rRNA rRNA 2640 3095 -805 7 608 4149 194 13 22 chrUextra 3144260 3145231 -25859425 - SAR_DM Satellite Satellite -305 1167 205 7 9 3875 203 13 32 chrUextra 3145333 3146291 -25858365 + SAR_DM Satellite Satellite 1 939 -203 7 609 8302 16 39 1 chrUextra 3146410 3147381 -25857275 - R1_DM LINE R1 -1120 4236 3229 7 609 338 147 59 59 chrUextra 3147481 3147582 -25857074 + XDMR_DM Unknown Unknown 260 360 0 7 609 4107 172 15 28 chrUextra 3147496 3148448 -25856208 - SAR_DM Satellite Satellite -354 1118 180 7 609 4008 179 89 26 chrUextra 3148555 3149527 -25855129 + Gypsy12_LTR LTR Gypsy 1179 2212 -124 7 609 1945 36 4 27 chrUextra 3150701 3150960 -25853696 + BATUMI_I LTR Pao 7032 7284 -679 7 609 3477 154 122 28 chrUextra 3150960 3151673 -25852983 + TAHRE LINE telomeric 403 1182 -9281 7 609 4578 134 97 41 chrUextra 3151774 3152746 -25851910 + TART LINE telomeric 9576 10601 -3876 7 609 445 339 74 18 chrUextra 3152957 3153293 -25851363 + ACCORD_I LTR Gypsy 2817 3171 -3117 7 609 549 313 8 2 chrUextra 3153286 3153479 -25851177 + Gypsy5_I LTR Gypsy 2747 3113 -3307 7 609 32 0 0 0 chrUextra 3154050 3154082 -25850574 + AT_rich Low_complexity Low_complexity 1 32 0 7 609 4737 8 2 4 chrUextra 3154366 3154892 -25849764 + LSU-rRNA_Dme rRNA rRNA 905 1429 -2471 7 609 7639 47 11 11 chrUextra 3154992 3155965 -25848691 + R1_DM LINE R1 40 1012 -4344 7 609 8499 21 0 0 chrUextra 3156066 3157034 -25847622 - FW_DM LINE Jockey -1066 3626 2659 7 609 4132 23 4 2 chrUextra 3157138 3157610 -25847046 - Gypsy_LTR LTR Gypsy -9 473 1 7 609 2069 18 0 0 chrUextra 3157610 3157838 -25846818 + Invader1_LTR LTR Gypsy 196 423 0 7 609 2526 11 0 0 chrUextra 3157838 3158111 -25846545 + Invader1_I LTR Gypsy 1 273 -2913 7 609 3879 197 17 23 chrUextra 3158211 3159184 -25845472 + SAR_DM Satellite Satellite 1 967 -216 7 609 5100 101 1 6 chrUextra 3160357 3161053 -25843603 + Gypsy12_I LTR Gypsy 1386 2078 -3468 7 609 325 125 0 0 chrUextra 3161059 3161107 -25843549 + Gypsy12_I LTR Gypsy 2405 2452 -3094 7 609 1532 117 5 0 chrUextra 3161116 3161329 -25843327 + Gypsy12_I LTR Gypsy 2689 2902 -2644 7 609 6040 6 95 1 chrUextra 3161433 3162403 -25842253 - Invader3_I LTR Gypsy -3041 1847 787 7 609 751 0 0 0 chrUextra 3162503 3162587 -25842069 + NTS_DM Other Other 50 133 -107 7 609 1350 18 0 6 chrUextra 3162587 3162752 -25841904 + NTS_DM Other Other 38 201 -39 7 609 936 9 0 27 chrUextra 3162804 3162916 -25841740 + NTS_DM Other Other 25 133 -107 7 609 1320 18 0 12 chrUextra 3162916 3163082 -25841574 + NTS_DM Other Other 38 201 -39 7 609 1408 23 0 22 chrUextra 3163134 3163315 -25841341 + NTS_DM Other Other 25 201 -39 7 609 21 57 0 0 chrUextra 3163315 3163350 -25841306 + AT_rich Low_complexity Low_complexity 1 35 0 7 609 660 42 10 50 chrUextra 3163376 3163476 -25841180 + NTS_DM Other Other 25 120 -120 7 609 7786 45 3 0 chrUextra 3163576 3164492 -25840164 + BS2 LINE Jockey 3125 4043 -678 7 609 2473 171 37 10 chrUextra 3164684 3165169 -25839487 - TART_B1 LINE telomeric -9359 1295 798 7 609 546 104 37 111 chrUextra 3165164 3165272 -25839384 - TART LINE telomeric -7157 7320 7221 7 609 1789 124 0 52 chrUextra 3165284 3165590 -25839066 - TART LINE telomeric -10505 3972 3683 7 609 248 108 0 0 chrUextra 3165585 3165622 -25839034 - TART LINE telomeric -11115 3362 3326 7 609 8260 23 7 3 chrUextra 3165722 3166695 -25837961 + ACCORD2_I LTR Gypsy 5551 6527 -685 7 609 4581 2 0 0 chrUextra 3166795 3167288 -25837368 + LSU-rRNA_Dme rRNA rRNA 2087 2579 -1321 7 609 4505 6 2 2 chrUextra 3167276 3167768 -25836888 + R2_DM LINE R2 1641 2132 -1475 7 609 1147 35 0 21 chrUextra 3167868 3168013 -25836643 - TAHRE LINE telomeric -9164 1299 1158 7 609 7366 13 1 0 chrUextra 3168018 3168841 -25835815 - DOC2_DM LINE Jockey 0 4793 3970 7 609 8458 30 0 1 chrUextra 3168941 3169914 -25834742 + R1_DM LINE R1 1521 2492 -2864 7 609 5349 67 0 14 chrUextra 3170014 3170731 -25833925 - IDEFIX_I LTR Gypsy -3963 1665 959 7 609 1817 69 32 4 chrUextra 3170738 3170986 -25833670 - IDEFIX_I LTR Gypsy -4808 820 566 7 609 3400 15 0 0 chrUextra 3171086 3171486 -25833170 - ROO_I LTR Pao -1252 7004 6605 7 609 4968 21 0 0 chrUextra 3171486 3172058 -25832598 - ROO_I LTR Pao -5054 3202 2631 7 609 8275 29 42 0 chrUextra 3172158 3173130 -25831526 - R1_DM LINE R1 -2024 3332 2320 7 609 7356 42 3 52 chrUextra 3173230 3174202 -25830454 + Gypsy12_LTR LTR Gypsy 428 1351 -985 7 609 2530 73 20 52 chrUextra 3174302 3174707 -25829949 - DM297_LTR LTR Gypsy -22 392 1 7 609 3813 55 37 12 chrUextra 3174707 3175274 -25829382 - DM297_I LTR Gypsy 0 6167 5587 7 609 2007 49 4 8 chrUextra 3175374 3175621 -25829035 + NINJA_LTR LTR Pao 72 317 0 7 609 5387 34 10 39 chrUextra 3175621 3176346 -25828310 + NINJA_I LTR Pao 1 704 -5307 7 609 5919 24 0 15 chrUextra 3176446 3177166 -25827490 - TAHRE LINE telomeric -9735 728 20 7 609 267 93 0 0 chrUextra 3177143 3177186 -25827470 - TAHRE LINE telomeric 0 10463 10421 7 609 1752 29 0 0 chrUextra 3177208 3177418 -25827238 - TAHRE LINE telomeric -9 10454 10245 7 609 1332 12 0 78 chrUextra 3177518 3177697 -25826959 - MDG3_LTR LTR Gypsy -102 165 1 7 609 1319 33 17 17 chrUextra 3177697 3177856 -25826800 + FW_DM LINE Jockey 1668 1902 -2790 7 609 4387 6 0 0 chrUextra 3178590 3179075 -25825581 + FW_DM LINE Jockey 4208 4692 0 7 609 3539 57 6 0 chrUextra 3179079 3179551 -25825105 - MDG3_I LTR Gypsy -2893 2093 1619 7 609 2655 72 35 35 chrUextra 3179662 3180634 -25824022 + DMSAT6 Satellite Satellite 1 972 -28 7 609 430 20 0 0 chrUextra 3180734 3180784 -25823872 - R1_DM LINE R1 -748 4608 4559 7 609 5463 16 25 3 chrUextra 3180782 3181419 -25823237 - R1_DM LINE R1 -1270 4086 3436 7 609 2372 40 98 0 chrUextra 3181409 3181706 -25822950 - R1_DM LINE R1 -2076 3280 2955 7 609 479 172 9 57 chrUextra 3182896 3183001 -25821655 - Gypsy12_LTR LTR Gypsy -2236 100 1 7 609 2932 87 87 2 chrUextra 3183000 3183404 -25821252 - Gypsy12_I LTR Gypsy 0 5546 5109 7 609 3487 69 0 18 chrUextra 3183397 3183839 -25820817 - Gypsy12_I LTR Gypsy -592 4954 4521 7 609 261 98 0 0 chrUextra 3184462 3184503 -25820153 + (CTG)n Simple_repeat Simple_repeat 2 42 0 7 609 7117 49 79 10 chrUextra 3185022 3185994 -25818662 - PROTOP_A DNA P -55 1050 12 7 609 8204 35 0 15 chrUextra 3186094 3187066 -25817590 - BATUMI_I LTR Pao -1722 6241 5285 7 609 6891 31 5 5 chrUextra 3187275 3188138 -25816518 + PROTOP_A DNA P 1 994 -111 7 609 2723 200 41 14 chrUextra 3188240 3189209 -25815447 + SAR_DM Satellite Satellite 1 995 -208 7 609 210 143 0 0 chrUextra 3189616 3189651 -25815005 + (CAA)n Simple_repeat Simple_repeat 1 35 0 7 609 23 0 0 0 chrUextra 3190108 3190131 -25814525 + AT_rich Low_complexity Low_complexity 1 23 0 7 609 348 230 0 20 chrUextra 3190380 3190482 -25814174 + XDMR_DM Unknown Unknown 261 360 0 7 609 3834 191 26 19 chrUextra 3190396 3191316 -25813340 - SAR_DM Satellite Satellite -354 1118 192 7 609 898 84 0 8 chrUextra 3191219 3191351 -25813305 + ARS406_DM Unknown Unknown 1 131 -222 7 609 1739 5 0 0 chrUextra 3191451 3191639 -25813017 + DIVER_I LTR Pao 5456 5643 0 7 609 2040 5 0 0 chrUextra 3191639 3191863 -25812793 + DIVER_LTR LTR Pao 1 224 0 7 609 285 322 20 20 chrUextra 3192268 3192414 -25812242 - Gypsy4_I LTR Gypsy -2815 3473 3328 7 609 271 264 0 0 chrUextra 3192534 3192621 -25812035 - Copia_I LTR Copia -1055 3538 3452 7 609 23 0 0 0 chrUextra 3192802 3192825 -25811831 + AT_rich Low_complexity Low_complexity 1 23 0 7 609 758 280 13 13 chrUextra 3193012 3193316 -25811340 - Copia_I LTR Copia -2314 2279 1976 7 609 1323 68 62 0 chrUextra 3193316 3193493 -25811163 + BS2 LINE Jockey 2722 2909 -1812 7 609 3889 188 18 25 chrUextra 3193616 3194528 -25810128 + SAR_DM Satellite Satellite 326 1230 -242 7 609 734 31 62 0 chrUextra 3194467 3194564 -25810092 - ARS406_DM Unknown Unknown -166 187 85 7 609 7808 55 5 8 chrUextra 3194664 3195635 -25809021 - DMCR1A LINE CR1 -2570 1900 933 7 609 1186 0 0 0 chrUextra 3196296 3196423 -25808233 - DM1731_I LTR Copia -1292 2684 2558 7 609 3130 38 0 0 chrUextra 3196807 3197174 -25807482 - STALKER4_LTR LTR Gypsy -35 367 1 7 609 4018 60 18 5 chrUextra 3197174 3197772 -25806884 - STALKER4_I LTR Gypsy 0 6530 5925 7 609 8382 20 16 2 chrUextra 3197877 3198848 -25805808 - R1_DM LINE R1 -1192 4164 3180 7 609 3748 199 31 23 chrUextra 3198948 3199919 -25804737 - SAR_DM Satellite Satellite -435 1037 59 7 609 8290 20 45 2 chrUextra 3200019 3200990 -25803666 - R1_DM LINE R1 -1160 4196 3184 7 609 5885 14 35 1 chrUextra 3201090 3201784 -25802872 - PROTOP_A DNA P -388 717 1 7 609 3792 32 0 0 chrUextra 3202161 3202597 -25802059 + R1_DM LINE R1 1344 1779 -3577 7 609 3361 30 114 0 chrUextra 3202597 3203132 -25801524 + R1_DM LINE R1 1974 2569 -2787 7 609 4256 11 2 2 chrUextra 3203232 3203707 -25800949 + DM412B_LTR LTR Gypsy 97 571 0 7 609 4516 10 0 0 chrUextra 3203707 3204203 -25800453 + DM176_I LTR Gypsy 672 1167 -5253 7 609 757 152 12 0 chrUextra 3204735 3204906 -25799750 + (AATAG)n Simple_repeat Simple_repeat 2 174 0 7 609 4121 195 14 19 chrUextra 3205379 3206345 -25798311 - SAR_DM Satellite Satellite -255 1217 256 7 609 6769 33 0 0 chrUextra 3206447 3207233 -25797423 - FW_DM LINE Jockey -3906 786 1 7 609 1249 81 11 0 chrUextra 3207241 3207415 -25797241 - MDG1_I LTR Gypsy -1119 5477 5302 7 609 3828 31 9 0 chrUextra 3207515 3207962 -25796694 - FW_DM LINE Jockey -3921 771 321 7 609 4460 17 13 2 chrUextra 3207963 3208485 -25796171 - G_DM LINE Jockey 0 4346 3819 7 609 2704 93 21 13 chrUextra 3208586 3209555 -25795101 + DMSAT6 Satellite Satellite 1 975 -37 7 609 4840 26 14 123 chrUextra 3209656 3210389 -25794267 - CIRCE LINE Composite -723 5633 4981 7 609 3314 6 0 3 chrUextra 3210725 3211091 -25793565 + STALKER4_LTR LTR Gypsy 38 402 0 7 609 688 19 74 0 chrUextra 3211118 3211213 -25793443 + STALKER4_I LTR Gypsy 2229 2317 -4213 7 609 3717 41 2 0 chrUextra 3211231 3211695 -25792961 + STALKER4_I LTR Gypsy 3114 3578 -2952 7 609 1620 24 14 0 chrUextra 3212343 3212765 -25791891 + (GAGAA)n Simple_repeat Simple_repeat 1 427 0 7 609 608 245 113 52 chrUextra 3212877 3213239 -25791417 + M4DM DNA Transib 3 386 -1049 7 609 1254 98 122 5 chrUextra 3213630 3213835 -25790821 + DNAREP1_DM LINE Penelope 1 229 -365 7 609 3894 190 33 11 chrUextra 3213954 3214905 -25789751 + SAR_DM Satellite Satellite 57 1028 -444 7 609 8619 10 9 0 chrUextra 3215005 3215975 -25788681 - DM176_I LTR Gypsy -2117 4303 3325 7 609 738 184 0 22 chrUextra 3216621 3216760 -25787896 - DMCR1A LINE CR1 -1848 2622 2487 7 609 947 222 374 0 chrUextra 3216765 3217045 -25787611 - DMCR1A LINE CR1 -2445 2025 1641 7 609 3819 193 24 29 chrUextra 3217145 3218115 -25786541 + SAR_DM Satellite Satellite 1 965 -208 7 609 3984 201 14 21 chrUextra 3218215 3219175 -25785481 + SAR_DM Satellite Satellite 1 953 -203 7 609 5049 59 112 0 chrUextra 3219285 3220255 -25784401 + STALKER4_I LTR Gypsy 1165 2242 -4288 7 609 3372 5 5 10 chrUextra 3220355 3220739 -25783917 - G2_DM LINE Jockey -1522 1580 1199 7 609 5581 5 0 0 chrUextra 3220725 3221325 -25783331 - G2_DM LINE Jockey -2340 762 163 7 609 8512 17 13 5 chrUextra 3221425 3222395 -25782261 - Gypsy4_I LTR Gypsy -3588 2700 1723 7 609 6935 58 5 29 chrUextra 3222496 3223465 -25781191 + Gypsy10_I LTR Gypsy 2402 3347 -1931 7 609 6570 62 2 19 chrUextra 3223565 3224485 -25780171 - R1_DM LINE R1 -4451 905 1 7 609 3538 196 18 20 chrUextra 3224641 3225605 -25779051 - SAR_DM Satellite Satellite -208 1264 303 7 609 2587 49 149 0 chrUextra 3225705 3226234 -25778422 - IDEFIX_I LTR Gypsy -3645 1983 1376 7 609 3150 64 9 0 chrUextra 3226234 3226674 -25777982 - IDEFIX_I LTR Gypsy -4567 1061 618 7 609 951 296 65 106 chrUextra 3228932 3229804 -25774852 - Invader3_I LTR Gypsy -1309 3579 2743 7 609 3693 175 15 20 chrUextra 3229987 3230955 -25773701 + SAR_DM Satellite Satellite 1 963 -208 7 609 3368 0 8 0 chrUextra 3231055 3231453 -25773203 + TART LINE telomeric 10263 10663 -3814 7 609 2886 122 94 34 chrUextra 3231441 3232025 -25772631 + TART LINE telomeric 9665 10283 -4194 7 609 21 0 0 0 chrUextra 3232638 3232659 -25771997 + AT_rich Low_complexity Low_complexity 1 21 0 7 609 770 52 0 108 chrUextra 3232965 3233095 -25771561 - Baggins1 LINE LOA 0 5453 5338 7 609 3248 25 5 0 chrUextra 3233195 3233596 -25771060 - PROTOP_A DNA P -702 403 1 7 609 3704 56 4 7 chrUextra 3233596 3234158 -25770498 - PROTOP_A DNA P -31 1074 570 7 609 3480 184 14 19 chrUextra 3234265 3235234 -25769422 + SAR_DM Satellite Satellite 1 963 -227 7 609 189 147 0 0 chrUextra 3235975 3236009 -25768647 + (TTTTTG)n Simple_repeat Simple_repeat 1 34 0 7 609 1512 11 0 0 chrUextra 3236751 3236925 -25767731 + (TCTTG)n Simple_repeat Simple_repeat 3 176 0 7 609 807 10 10 0 chrUextra 3237474 3237574 -25767082 + NTS_DM Other Other 33 133 -107 7 609 817 0 0 0 chrUextra 3237574 3237670 -25766986 + NTS_DM Other Other 38 133 -107 7 609 1408 20 20 20 chrUextra 3237670 3237873 -25766783 + NTS_DM Other Other 38 240 0 7 609 1720 25 17 17 chrUextra 3237873 3238113 -25766543 + NTS_DM Other Other 1 240 0 7 609 1713 25 17 17 chrUextra 3238113 3238353 -25766303 + NTS_DM Other Other 1 240 0 7 609 774 11 0 0 chrUextra 3238353 3238443 -25766213 + NTS_DM Other Other 1 90 -150 7 609 3128 56 9 0 chrUextra 3238543 3238969 -25765687 - HETA LINE telomeric -1812 4269 3840 7 609 398 0 0 0 chrUextra 3238976 3239032 -25765624 - TART LINE telomeric 0 14477 14422 7 609 3284 80 12 6 chrUextra 3239032 3239512 -25765144 - TART LINE telomeric -3814 10663 10181 7 609 8039 25 0 0 chrUextra 3239612 3240581 -25764075 - DMCR1A LINE CR1 -1956 2514 1546 7 609 4688 23 2 0 chrUextra 3240681 3241251 -25763405 - R1_DM LINE R1 -3108 2248 1678 7 609 1502 40 62 13 chrUextra 3241248 3241475 -25763181 - R1_DM LINE R1 -4389 967 730 7 609 4202 150 3 30 chrUextra 3241457 3242089 -25762567 - R1_DM LINE R1 -4741 615 1 7 609 455 36 0 0 chrUextra 3242089 3242144 -25762512 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2578 7 609 4022 11 79 0 chrUextra 3242150 3242719 -25761937 - R2_DM LINE R2 0 3607 2994 7 609 901 239 10 0 chrUextra 3242826 3243115 -25761541 + QUASIMODO_I LTR Gypsy 5544 5835 -225 7 609 1874 110 62 63 chrUextra 3243291 3243758 -25760898 + QUASIMODO_LTR LTR Gypsy 1 589 -69 7 609 680 115 0 0 chrUextra 3243888 3244001 -25760655 - ARS406_DM Unknown Unknown -240 113 1 7 609 3668 190 13 17 chrUextra 3243908 3244838 -25759818 + SAR_DM Satellite Satellite 195 1120 -352 7 609 391 184 9 19 chrUextra 3244752 3244857 -25759799 - XDMR_DM Unknown Unknown 0 360 257 7 609 540 229 0 0 chrUextra 3244957 3245079 -25759577 + Gypsy_I LTR Gypsy 6098 6219 -288 7 609 1139 208 47 47 chrUextra 3245081 3245485 -25759171 + Gypsy_LTR LTR Gypsy 33 436 -46 7 609 229 220 0 0 chrUextra 3245638 3245697 -25758959 + TIRANT_I LTR Gypsy 6974 7032 -660 7 609 3281 207 26 18 chrUextra 3246026 3246990 -25757666 - SAR_DM Satellite Satellite -702 971 1 7 609 322 178 50 101 chrUextra 3247363 3247482 -25757174 + Copia_I LTR Copia 4401 4513 -80 7 609 34 24 0 0 chrUextra 3248000 3248041 -25756615 + AT_rich Low_complexity Low_complexity 1 41 0 7 609 1593 64 95 41 chrUextra 3248164 3248459 -25756197 + DM176_LTR LTR Gypsy 171 481 -26 7 609 1453 126 129 59 chrUextra 3248493 3248880 -25755776 + DM297_LTR LTR Gypsy 1 414 0 7 609 420 170 69 10 chrUextra 3248904 3249005 -25755651 + Gypsy2_LTR LTR Gypsy 100 206 -147 7 609 1158 122 0 0 chrUextra 3249234 3249592 -25755064 + (TA)n Simple_repeat Simple_repeat 1 358 0 7 609 2313 76 32 20 chrUextra 3249596 3250012 -25754644 - Gypsy6A_LTR LTR Gypsy 0 420 1 7 609 1573 16 5 0 chrUextra 3250014 3250201 -25754455 - Gypsy6_I LTR Gypsy 0 7012 6825 7 609 542 67 100 0 chrUextra 3250329 3250419 -25754237 + MAX_I LTR Pao 1256 1354 -6560 7 609 5830 53 48 23 chrUextra 3250405 3251271 -25753385 + MAX_I LTR Pao 1219 2106 -5808 7 609 3775 176 18 26 chrUextra 3251372 3252340 -25752316 - SAR_DM Satellite Satellite -311 1161 202 7 609 4158 21 0 4 chrUextra 3252440 3252965 -25751691 + TART LINE telomeric 13955 14477 0 7 609 1909 167 11 23 chrUextra 3252967 3253409 -25751247 + TAHRE LINE telomeric 220 656 -9807 7 609 5086 10 2 2 chrUextra 3253509 3254115 -25750541 + QUASIMODO_LTR LTR Gypsy 53 658 0 7 609 1279 110 56 99 chrUextra 3254128 3254450 -25750206 - ACCORD2_I LTR Gypsy -5342 1870 1563 7 609 7775 25 20 2 chrUextra 3254578 3255547 -25749109 - R1_DM LINE R1 -91 5265 4280 7 609 2401 102 30 8 chrUextra 3255647 3256606 -25748050 + DMSAT6 Satellite Satellite 1 979 -6 7 609 4051 242 14 1 chrUextra 3256719 3257676 -25746980 - Gypsy6_I LTR Gypsy -2423 4589 3621 7 609 6430 110 21 0 chrUextra 3257785 3258754 -25745902 - Gypsy12_I LTR Gypsy -2023 3523 2535 7 609 612 0 0 0 chrUextra 3258854 3258924 -25745732 + DM176_I LTR Gypsy 6351 6420 0 7 609 4241 12 0 0 chrUextra 3258924 3259431 -25745225 + DM176_LTR LTR Gypsy 1 507 0 7 609 28 48 0 0 chrUextra 3259703 3259745 -25744911 + AT_rich Low_complexity Low_complexity 1 42 0 7 609 3572 2 0 7 chrUextra 3259923 3260351 -25744305 + BATUMI_I LTR Pao 7539 7963 0 7 609 2198 28 0 27 chrUextra 3260351 3260642 -25744014 + BATUMI_I LTR Pao 7002 7284 -679 7 609 1954 28 28 0 chrUextra 3260640 3260892 -25743764 - PROTOP DNA P -2431 2049 1791 7 609 3729 209 17 26 chrUextra 3260992 3261960 -25742696 - SAR_DM Satellite Satellite -1087 958 1 7 609 1067 303 38 39 chrUextra 3262061 3263021 -25741635 + SAR_DM Satellite Satellite 297 1255 -217 7 609 8110 5 16 1 chrUextra 3263130 3264099 -25740557 - IDEFIX_I LTR Gypsy -3594 2034 1051 7 609 1001 30 15 0 chrUextra 3264308 3264440 -25740216 - MAX_LTR LTR Pao -187 134 1 7 609 4291 45 8 50 chrUextra 3264445 3265167 -25739489 - MAX_I LTR Pao -2 7912 6837 7 609 812 329 19 10 chrUextra 3265267 3265685 -25738971 + Gypsy3_I LTR Gypsy 1108 1529 -4648 7 609 488 253 111 50 chrUextra 3265798 3266160 -25738496 + M4DM DNA Transib 3 386 -1049 7 609 1632 23 14 0 chrUextra 3267080 3267301 -25737355 + TC1-2_DM DNA Tc1 1313 1536 -108 7 609 3258 92 2 26 chrUextra 3267403 3267905 -25736751 - Gypsy12_I LTR Gypsy -4222 1324 835 7 609 2846 93 4 26 chrUextra 3267910 3268371 -25736285 - Gypsy12_I LTR Gypsy -4991 555 105 7 609 3451 0 0 0 chrUextra 3268471 3268862 -25735794 - TABOR_LTR LTR Gypsy -115 391 1 7 609 2158 178 36 19 chrUextra 3268860 3269439 -25735217 - TABOR_I LTR Gypsy 0 6336 5748 7 609 4265 0 2 0 chrUextra 3269539 3270031 -25734625 + NOMAD_LTR LTR Gypsy 26 518 0 7 609 227 0 0 0 chrUextra 3270031 3270057 -25734599 + NOMAD_LTR LTR Gypsy 493 518 0 7 609 3910 0 2 0 chrUextra 3270057 3270507 -25734149 + NOMAD_I LTR Gypsy 1 451 -6121 7 609 1725 156 11 31 chrUextra 3270607 3270957 -25733699 - DMCR1A LINE CR1 -2190 2280 1938 7 609 359 77 19 0 chrUextra 3270972 3271024 -25733632 + DOC4_DM LINE Jockey 2494 2546 -245 7 609 5464 79 36 87 chrUextra 3272743 3273711 -25730945 + CIRCE LINE Composite 3628 4546 -1810 7 609 7621 41 6 0 chrUextra 3274879 3275847 -25728809 - R1_DM LINE R1 -2039 3317 2344 7 609 21 36 0 0 chrUextra 3276618 3276646 -25728010 + AT_rich Low_complexity Low_complexity 1 28 0 7 610 7693 31 4 0 chrUextra 3278083 3279051 -25725605 + NINJA_I LTR Pao 1064 2035 -3976 7 610 1125 22 0 0 chrUextra 3279151 3279289 -25725367 - NTS_DM Other Other -102 138 1 7 610 1492 10 20 15 chrUextra 3279289 3279491 -25725165 - NTS_DM Other Other 0 240 38 7 610 870 9 0 27 chrUextra 3279491 3279603 -25725053 - NTS_DM Other Other -107 133 25 7 610 22 56 0 0 chrUextra 3279629 3279665 -25724991 + AT_rich Low_complexity Low_complexity 1 36 0 7 610 261 125 0 0 chrUextra 3279678 3279718 -25724938 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 610 246 150 0 0 chrUextra 3279770 3279810 -25724846 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 610 27 29 0 0 chrUextra 3279815 3279849 -25724807 + AT_rich Low_complexity Low_complexity 1 34 0 7 610 22 56 0 0 chrUextra 3279913 3279949 -25724707 + AT_rich Low_complexity Low_complexity 1 36 0 7 610 861 0 0 0 chrUextra 3280021 3280119 -25724537 - LSU-rRNA_Dme rRNA rRNA 0 3900 3803 7 610 3290 5 0 0 chrUextra 3280800 3281187 -25723469 + FW_DM LINE Jockey 887 1273 -3419 7 610 3801 181 16 22 chrUextra 3281294 3282255 -25722401 - SAR_DM Satellite Satellite -396 955 1 7 610 257 30 0 0 chrUextra 3282355 3282388 -25722268 + Invader2_I LTR Gypsy 4560 4592 0 7 610 1922 8 85 4 chrUextra 3282388 3282634 -25722022 + Invader2_LTR LTR Gypsy 1 266 0 7 610 1028 88 0 0 chrUextra 3282634 3282793 -25721863 + STALKER4_I LTR Gypsy 3300 3458 -3072 7 610 236 57 0 0 chrUextra 3282794 3282829 -25721827 + IDEFIX_I LTR Gypsy 437 471 -5157 7 610 3051 77 7 0 chrUextra 3282825 3283266 -25721390 + IDEFIX_I LTR Gypsy 657 1100 -4528 7 610 473 33 0 16 chrUextra 3283261 3283323 -25721333 + IDEFIX_I LTR Gypsy 1377 1437 -4191 7 610 7890 27 5 0 chrUextra 3283423 3284391 -25720265 - MAX_I LTR Pao -5528 2386 1414 7 610 1107 203 4 4 chrUextra 3284491 3284763 -25719893 - SAR_DM Satellite Satellite -705 767 496 7 610 1714 192 2 7 chrUextra 3284778 3285188 -25719468 - SAR_DM Satellite Satellite -569 903 496 7 610 777 31 0 0 chrUextra 3285193 3285291 -25719365 + ARS406_DM Unknown Unknown 90 187 -166 7 610 1126 159 12 16 chrUextra 3285203 3285458 -25719198 - SAR_DM Satellite Satellite -569 903 650 7 610 1637 119 76 16 chrUextra 3285558 3285874 -25718782 - Gypsy6_LTR LTR Gypsy -72 335 1 7 610 5522 0 0 0 chrUextra 3285874 3286525 -25718131 + TABOR_I LTR Gypsy 1012 1662 -4674 7 610 5506 3 152 101 chrUextra 3286625 3287592 -25717064 + ROVER-I_DM LTR Gypsy 23 1038 -5546 7 610 2318 121 17 34 chrUextra 3287697 3288659 -25715997 - DMSAT6 Satellite Satellite -6 944 1 7 610 3781 13 0 0 chrUextra 3288759 3289209 -25715447 - PROTOP_A DNA P -655 450 1 7 610 799 152 197 0 chrUextra 3289228 3289406 -25715250 - Gypsy8_I LTR Gypsy -3905 442 230 7 610 246 200 0 18 chrUextra 3289609 3289665 -25714991 - Gypsy8_LTR LTR Gypsy -248 56 2 7 610 1281 172 260 43 chrUextra 3289828 3290339 -25714317 + TART LINE telomeric 9858 10479 -3998 7 610 34 24 0 0 chrUextra 3290358 3290399 -25714257 + AT_rich Low_complexity Low_complexity 1 41 0 7 610 1620 20 0 0 chrUextra 3291126 3291429 -25713227 + (CAAAA)n Simple_repeat Simple_repeat 1 303 0 7 610 5736 26 40 0 chrUextra 3291960 3292927 -25711729 - R1_DM LINE R1 -2401 2955 1916 7 610 3983 42 62 1 chrUextra 3293232 3293993 -25710663 + PROTOP DNA P 148 823 -282 7 610 3471 188 35 19 chrUextra 3294114 3295039 -25709617 + SAR_DM Satellite Satellite 326 1264 -208 7 610 773 71 0 0 chrUextra 3294942 3295054 -25709602 - ARS406_DM Unknown Unknown -164 189 78 7 610 4493 4 0 0 chrUextra 3295163 3295681 -25708975 + NOMAD_LTR LTR Gypsy 1 518 0 7 610 257 293 13 7 chrUextra 3296232 3296383 -25708273 - XDMR Unknown Unknown -209 152 1 7 610 1096 302 30 37 chrUextra 3296283 3297155 -25707501 + SAR_DM Satellite Satellite 256 1121 -351 7 610 353 135 33 33 chrUextra 3297079 3297171 -25707485 - XDMR_DM Unknown Unknown -10 350 259 7 610 1483 0 6 0 chrUextra 3297295 3297471 -25707185 + QUASIMODO_LTR LTR Gypsy 237 413 -245 7 610 1035 57 12 71 chrUextra 3297588 3297757 -25706899 - BLOOD_LTR LTR Gypsy -143 256 98 7 610 4247 12 0 0 chrUextra 3297754 3298262 -25706394 - BLOOD_I LTR Gypsy -1658 4955 4448 7 610 1914 103 111 40 chrUextra 3298362 3298787 -25705869 + BATUMI_I LTR Pao 133 587 -7376 7 610 3121 29 26 0 chrUextra 3298805 3299188 -25705468 - Invader6_LTR LTR Gypsy 0 393 1 7 610 779 0 0 0 chrUextra 3299188 3299278 -25705378 - Invader6_I LTR Gypsy 0 4099 4010 7 610 264 59 0 0 chrUextra 3299295 3299329 -25705327 + (T)n Simple_repeat Simple_repeat 1 34 0 7 610 3696 190 12 23 chrUextra 3299435 3300393 -25704263 + SAR_DM Satellite Satellite 212 1159 -313 7 610 7972 23 1 0 chrUextra 3300496 3301463 -25703193 - TAHRE LINE telomeric -5021 5442 4475 7 610 2387 90 24 21 chrUextra 3301564 3302530 -25702126 + DMSAT6 Satellite Satellite 1 968 -6 7 610 3282 212 27 13 chrUextra 3302631 3303587 -25701069 - SAR_DM Satellite Satellite -208 1264 295 7 610 1761 0 0 0 chrUextra 3303696 3303896 -25700760 - DIVER_I LTR Pao -5443 200 1 7 610 1927 5 0 0 chrUextra 3303917 3304141 -25700515 - DIVER_LTR LTR Pao 0 224 1 7 610 3335 22 0 26 chrUextra 3304141 3304562 -25700094 + CIRCE LINE Composite 1473 1882 -4474 7 610 1036 244 95 33 chrUextra 3304775 3305258 -25699398 - G_DM LINE Jockey -3516 830 318 7 610 2435 49 9 0 chrUextra 3305261 3305585 -25699071 + R2_DM LINE R2 2014 2340 -1267 7 610 1110 7 0 7 chrUextra 3305584 3305728 -25698928 - G2_DM LINE Jockey -14 3088 2946 7 610 1096 267 117 33 chrUextra 3305835 3306734 -25697922 + SAR_DM Satellite Satellite 252 1225 -247 7 610 7933 12 4 0 chrUextra 3306894 3307860 -25696796 + Invader2_I LTR Gypsy 875 1844 -2748 7 610 7789 32 0 0 chrUextra 3307960 3308926 -25695730 - R1_DM LINE R1 -1850 3506 2541 7 610 5053 2 0 0 chrUextra 3310092 3310670 -25693986 + LSU-rRNA_Dme rRNA rRNA 2074 2651 -1249 7 610 531 0 0 0 chrUextra 3310667 3310728 -25693928 + R1_DM LINE R1 5296 5356 0 7 610 2884 3 0 0 chrUextra 3310726 3311058 -25693598 + LSU-rRNA_Dme rRNA rRNA 2640 2971 -929 7 610 4706 16 61 26 chrUextra 3311158 3311780 -25692876 - ACCORD2_I LTR Gypsy -6568 644 1 7 610 1751 14 0 23 chrUextra 3311780 3312000 -25692656 - ACCORD2_LTR LTR Gypsy 0 215 1 7 610 1064 8 0 0 chrUextra 3312000 3312124 -25692532 - R1_DM LINE R1 -2937 2419 2296 7 610 1038 8 0 0 chrUextra 3312224 3312343 -25692313 - PROTOP_A DNA P -986 119 1 7 610 799 152 197 0 chrUextra 3312362 3312540 -25692116 - Gypsy8_I LTR Gypsy -3905 442 230 7 610 246 200 0 18 chrUextra 3312743 3312799 -25691857 - Gypsy8_LTR LTR Gypsy -248 56 2 7 610 864 248 42 11 chrUextra 3312808 3313093 -25691563 - BURDOCK_I LTR Gypsy -3412 2448 2155 7 610 21 0 0 0 chrUextra 3313152 3313173 -25691483 + AT_rich Low_complexity Low_complexity 1 21 0 7 610 815 0 0 0 chrUextra 3313290 3313386 -25691270 + ROO_I LTR Pao 8161 8256 0 7 610 3742 2 0 0 chrUextra 3313386 3313814 -25690842 + ROO_LTR LTR Pao 1 428 0 7 610 488 253 111 50 chrUextra 3313843 3314205 -25690451 + M4DM DNA Transib 3 386 -1049 7 610 5768 52 9 8 chrUextra 3314356 3315137 -25689519 + Jockey2 LINE Jockey 2647 3428 0 7 610 3054 179 8 10 chrUextra 3315431 3316141 -25688515 + SAR_DM Satellite Satellite 195 903 -569 7 610 1051 82 0 0 chrUextra 3316148 3316306 -25688350 - ARS406_DM Unknown Unknown -195 158 1 7 610 833 219 0 4 chrUextra 3316156 3316385 -25688271 + SAR_DM Satellite Satellite 496 723 -749 7 610 1535 277 34 32 chrUextra 3316491 3317363 -25687293 - ROVER-I_DM LTR Gypsy -5203 1381 508 7 610 1881 172 7 10 chrUextra 3317554 3317960 -25686696 + SAR_DM Satellite Satellite 643 1047 -425 7 610 203 54 81 0 chrUextra 3317960 3317997 -25686659 + (TAAAAA)n Simple_repeat Simple_repeat 4 43 0 7 610 2381 157 14 8 chrUextra 3318000 3318519 -25686137 + SAR_DM Satellite Satellite 326 847 -625 7 610 7054 48 17 3 chrUextra 3318620 3319586 -25685070 + STALKER4_I LTR Gypsy 2155 3133 -3397 7 610 6271 21 48 4 chrUextra 3319686 3320499 -25684157 - STALKER4_I LTR Gypsy -979 5551 4703 7 610 968 71 156 0 chrUextra 3320498 3320652 -25684004 - STALKER4_I LTR Gypsy -2732 3798 3621 7 610 3838 184 17 21 chrUextra 3320752 3321718 -25682938 + SAR_DM Satellite Satellite 256 1217 -255 7 610 3983 10 0 0 chrUextra 3321818 3322300 -25682356 + Invader2_I LTR Gypsy 2072 2553 -2039 7 610 4202 6 0 0 chrUextra 3322300 3322784 -25681872 - GTWIN_LTR LTR Gypsy 0 495 12 7 610 4011 53 30 80 chrUextra 3323950 3324649 -25680007 - PROTOP_A DNA P -441 664 1 7 610 4164 28 63 0 chrUextra 3325016 3325982 -25678674 + R1_DM LINE R1 1666 2692 -2664 7 610 3496 95 0 50 chrUextra 3326082 3326660 -25677996 - R1_DM LINE R1 -4234 1122 574 7 610 982 102 29 29 chrUextra 3326661 3326833 -25677823 - R1_DM LINE R1 -5184 172 1 7 610 1269 79 5 35 chrUextra 3326851 3327048 -25677608 + Gypsy6A_LTR LTR Gypsy 71 261 -159 7 610 640 193 7 14 chrUextra 3327174 3327316 -25677340 + HETRP_DM Satellite Satellite 1529 1669 -203 7 610 610 230 0 32 chrUextra 3327433 3327590 -25677066 + HETRP_DM Satellite Satellite 1518 1669 -203 7 610 606 193 7 15 chrUextra 3327728 3327865 -25676791 + HETRP_DM Satellite Satellite 1529 1664 -208 7 610 482 210 0 56 chrUextra 3327987 3328113 -25676543 + HETRP_DM Satellite Satellite 1518 1636 -236 7 610 345 317 32 32 chrUextra 3328337 3328614 -25676042 + Invader1_I LTR Gypsy 950 1226 -1960 7 610 940 296 16 16 chrUextra 3328762 3329139 -25675517 + MICROPIA_I LTR Gypsy 1360 1736 -2740 7 610 4755 4 0 2 chrUextra 3329278 3329827 -25674829 - R2_DM LINE R2 -3057 550 3 7 610 3607 2 0 0 chrUextra 3329827 3330243 -25674413 - LSU-rRNA_Dme rRNA rRNA -1336 2564 2149 7 610 1801 13 17 13 chrUextra 3330383 3330622 -25674034 + NTS_DM Other Other 1 240 0 7 610 1839 4 17 13 chrUextra 3330622 3330861 -25673795 + NTS_DM Other Other 1 240 0 7 610 1836 4 17 13 chrUextra 3330861 3331100 -25673556 + NTS_DM Other Other 1 240 0 7 610 1626 29 0 0 chrUextra 3331100 3331306 -25673350 + NTS_DM Other Other 1 206 -34 7 610 5123 14 20 0 chrUextra 3331408 3332041 -25672615 - LSU-rRNA_Dme rRNA rRNA -2808 1092 447 7 610 1090 56 0 0 chrUextra 3332046 3332190 -25672466 - LSU-rRNA_Dme rRNA rRNA -3755 145 2 7 610 28 79 0 0 chrUextra 3332203 3332266 -25672390 + AT_rich Low_complexity Low_complexity 1 63 0 7 610 4587 45 20 5 chrUextra 3332490 3333093 -25671563 - G2_DM LINE Jockey -1090 2012 1401 7 610 302 83 21 0 chrUextra 3333095 3333143 -25671513 - NTS_DM Other Other -191 49 1 7 610 1015 154 29 21 chrUextra 3333143 3333381 -25671275 - NTS_DM Other Other 0 240 1 7 610 4065 69 44 105 chrUextra 3333544 3334383 -25670273 + MAX_I LTR Pao 410 1197 -6717 7 610 25 0 0 0 chrUextra 3334389 3334414 -25670242 + AT_rich Low_complexity Low_complexity 1 25 0 7 610 1684 44 4 17 chrUextra 3334603 3334835 -25669821 + R1_DM LINE R1 2009 2237 -3119 7 610 611 42 221 0 chrUextra 3334917 3335012 -25669644 - Gypsy6A_LTR LTR Gypsy -234 186 71 7 610 2701 109 84 67 chrUextra 3335030 3335568 -25669088 + R1_DM LINE R1 1 547 -4809 7 610 5271 28 1 0 chrUextra 3335668 3336323 -25668333 + QUASIMODO_I LTR Gypsy 428 1083 -4977 7 610 2668 6 0 0 chrUextra 3336316 3336633 -25668023 + QUASIMODO_I LTR Gypsy 1964 2280 -3780 7 610 7785 20 10 1 chrUextra 3336733 3337698 -25666958 - PROTOP DNA P -2700 1780 807 7 610 26 50 0 0 chrUextra 3337900 3337940 -25666716 + AT_rich Low_complexity Low_complexity 1 40 0 7 610 403 235 53 83 chrUextra 3338103 3338368 -25666288 + Gypsy3_LTR LTR Gypsy 112 368 -30 7 610 4757 2 0 0 chrUextra 3338863 3339403 -25665253 - LINEJ1_DM LINE Jockey -889 4131 3592 7 610 2145 87 0 15 chrUextra 3339966 3340322 -25664334 - QUASIMODO_LTR LTR Gypsy -292 366 52 7 610 3856 13 0 61 chrUextra 3340347 3340854 -25663802 + MICROPIA_LTR LTR Gypsy 1 476 0 7 610 342 0 0 0 chrUextra 3340854 3340893 -25663763 + MICROPIA_I LTR Gypsy 1 39 -4437 7 610 7833 4 20 0 chrUextra 3340995 3341958 -25662698 + QUASIMODO_I LTR Gypsy 3689 4670 -1390 7 610 6445 70 84 1 chrUextra 3342058 3343015 -25661641 - R1-2_DM LINE R1 -2127 1089 54 7 610 496 0 0 16 chrUextra 3343123 3343184 -25661472 - QUASIMODO_I LTR Gypsy -5999 61 2 7 610 5498 11 0 3 chrUextra 3343186 3343846 -25660810 - QUASIMODO_LTR LTR Gypsy 0 658 1 7 610 335 89 0 0 chrUextra 3343846 3343901 -25660755 - PROTOP_A DNA P -401 704 650 7 610 1260 34 284 0 chrUextra 3343898 3344088 -25660568 - PROTOP DNA P -3069 1411 1168 7 610 3644 173 21 29 chrUextra 3344195 3345135 -25659521 - SAR_DM Satellite Satellite -216 1256 324 7 610 1420 315 16 16 chrUextra 3345464 3346140 -25658516 - Copia2_I LTR Copia -2071 2091 1407 7 610 3653 190 9 15 chrUextra 3346319 3347283 -25657373 + SAR_DM Satellite Satellite 1 958 -208 7 610 8277 10 1 0 chrUextra 3347383 3348347 -25656309 - Invader1_I LTR Gypsy -1568 1618 654 7 610 249 278 22 11 chrUextra 3349126 3349217 -25655439 - Invader4_I LTR Gypsy -539 1874 1783 7 610 8247 1 2 2 chrUextra 3349511 3350475 -25654181 - LSU-rRNA_Dme rRNA rRNA -2307 1593 630 7 610 3630 183 36 13 chrUextra 3350575 3351534 -25653122 + SAR_DM Satellite Satellite 1 980 -219 7 610 4441 13 0 0 chrUextra 3351639 3352167 -25652489 + Invader1_I LTR Gypsy 2552 3079 -107 7 610 460 0 0 0 chrUextra 3352179 3352233 -25652423 + Invader1_I LTR Gypsy 3133 3186 0 7 610 3160 8 3 0 chrUextra 3352233 3352602 -25652054 + Invader1_LTR LTR Gypsy 1 370 -53 7 610 4624 2 0 0 chrUextra 3352703 3353236 -25651420 + NOMAD_I LTR Gypsy 2702 3234 -3338 7 610 3873 0 0 0 chrUextra 3353228 3353667 -25650989 + NOMAD_I LTR Gypsy 3980 4418 -2154 7 610 2813 126 57 133 chrUextra 3353767 3354731 -25649925 + BATUMI_I LTR Pao 98 988 -6975 7 610 2231 32 4 0 chrUextra 3354831 3355109 -25649547 + Gypsy4_LTR LTR Gypsy 9 287 0 7 610 4665 27 73 28 chrUextra 3355109 3355793 -25648863 + Gypsy4_I LTR Gypsy 1 715 -5573 7 610 8470 0 0 0 chrUextra 3355895 3356859 -25647797 - GTWIN_I LTR Gypsy -630 5791 4828 7 610 4948 19 72 0 chrUextra 3356959 3357923 -25646733 - DOC2_DM LINE Jockey -765 4028 2996 7 610 7873 0 2 0 chrUextra 3358023 3358987 -25645669 + TRANSPAC_I LTR Gypsy 2917 3882 -708 7 610 7691 11 3 0 chrUextra 3359087 3360051 -25644605 + QUASIMODO_I LTR Gypsy 4157 5123 -937 7 610 1915 255 62 30 chrUextra 3360162 3361072 -25643584 - ROVER-I_DM LTR Gypsy -5098 1486 548 7 610 1648 194 24 5 chrUextra 3361215 3361625 -25643031 - SAR_DM Satellite Satellite -525 947 530 7 610 261 143 109 16 chrUextra 3361598 3361662 -25642994 + XDMR Unknown Unknown 292 361 0 7 610 2147 180 25 8 chrUextra 3361658 3362179 -25642477 - SAR_DM Satellite Satellite -396 1076 547 7 610 2219 94 7 39 chrUextra 3362291 3363241 -25641415 + DMSAT6 Satellite Satellite 1 919 -82 7 610 3395 192 21 23 chrUextra 3363345 3364306 -25640350 + SAR_DM Satellite Satellite 1 959 -242 7 610 3601 189 12 16 chrUextra 3364407 3365370 -25639286 - SAR_DM Satellite Satellite -442 959 1 7 610 3268 203 11 19 chrUextra 3365471 3366432 -25638224 + SAR_DM Satellite Satellite 1 953 -242 7 610 1749 98 104 25 chrUextra 3366540 3366866 -25637790 - BATUMI_I LTR Pao -7611 352 1 7 610 1998 35 3 34 chrUextra 3366866 3367160 -25637496 - BATUMI_I LTR Pao -679 7284 7000 7 610 1496 179 9 6 chrUextra 3367158 3367495 -25637161 - SAR_DM Satellite Satellite -736 736 399 7 610 2633 50 6 0 chrUextra 3367601 3367943 -25636713 + STALKER4_LTR LTR Gypsy 36 379 -23 7 610 27 49 0 0 chrUextra 3368081 3368122 -25636534 + AT_rich Low_complexity Low_complexity 1 41 0 7 610 725 206 6 6 chrUextra 3368153 3368324 -25636332 + Stalker2_I LTR Gypsy 291 461 -6941 7 610 952 112 19 0 chrUextra 3368323 3368483 -25636173 + STALKER4_I LTR Gypsy 742 904 -5626 7 610 978 9 0 0 chrUextra 3368663 3368778 -25635878 - Gypsy_I LTR Gypsy -6392 115 1 7 610 3958 23 4 2 chrUextra 3368776 3369257 -25635399 - Gypsy_LTR LTR Gypsy 0 482 1 7 610 1746 40 0 0 chrUextra 3369257 3369479 -25635177 + DM1731_LTR LTR Copia 114 335 -1 7 610 1184 14 14 0 chrUextra 3369479 3369627 -25635029 + DM1731_I LTR Copia 1 150 -3826 7 610 681 19 0 27 chrUextra 3369727 3369838 -25634818 + TART LINE telomeric 14370 14477 0 7 610 2946 13 0 8 chrUextra 3369838 3370218 -25634438 + TART LINE telomeric 14101 14477 0 7 610 3991 2 0 2 chrUextra 3370218 3370691 -25633965 + TART LINE telomeric 11786 12257 -2220 7 610 607 0 0 0 chrUextra 3370791 3370864 -25633792 + ROO_LTR LTR Pao 356 428 0 7 610 371 116 87 0 chrUextra 3370864 3370927 -25633729 - ROVER-LTR_DM LTR Gypsy -298 69 1 7 610 589 116 0 0 chrUextra 3370930 3371025 -25633631 + STALKER4_LTR LTR Gypsy 271 365 -37 7 610 471 113 43 114 chrUextra 3371855 3371995 -25632661 - Gypsy12_I LTR Gypsy -5390 156 27 7 610 1635 201 15 20 chrUextra 3371965 3372365 -25632291 - Gypsy12_LTR LTR Gypsy -1938 398 1 7 610 2467 66 178 7 chrUextra 3372364 3372819 -25631837 - Gypsy12_I LTR Gypsy 0 5546 5014 7 610 1301 167 176 8 chrUextra 3372920 3373277 -25631379 - HETA LINE telomeric -1632 4449 4128 7 610 22 56 0 0 chrUextra 3373431 3373467 -25631189 + AT_rich Low_complexity Low_complexity 1 36 0 7 610 354 191 75 19 chrUextra 3373512 3373619 -25631037 + Copia_I LTR Copia 4401 4513 -80 7 610 3078 69 122 4 chrUextra 3373983 3374517 -25630139 - BATUMI_I LTR Pao -23 7940 7344 7 610 3136 42 9 14 chrUextra 3374512 3374947 -25629709 + BATUMI_I LTR Pao 6471 6903 -1060 7 610 1504 11 0 6 chrUextra 3375047 3375226 -25629430 + R1_DM LINE R1 5179 5356 0 7 610 1265 14 0 0 chrUextra 3375224 3375372 -25629284 + LSU-rRNA_Dme rRNA rRNA 2640 2787 -1113 7 610 5125 11 57 0 chrUextra 3375381 3376011 -25628645 + R2_DM LINE R2 374 1039 -2568 7 610 3107 97 12 29 chrUextra 3376114 3376632 -25628024 - Gypsy12_I LTR Gypsy -4991 555 47 7 610 1631 192 20 25 chrUextra 3376629 3377029 -25627627 - Gypsy12_LTR LTR Gypsy -1938 398 1 7 610 330 43 0 0 chrUextra 3377028 3377074 -25627582 - Gypsy12_I LTR Gypsy 0 5546 5501 7 610 1750 0 0 5 chrUextra 3377174 3377381 -25627275 + ACCORD_LTR LTR Gypsy 353 558 0 7 610 3557 60 43 0 chrUextra 3378350 3378948 -25625708 + PROTOP_A DNA P 573 1105 0 7 610 4538 105 57 28 chrUextra 3379300 3380263 -25624393 + STALKER4_I LTR Gypsy 408 1447 -5083 7 610 916 185 32 12 chrUextra 3380367 3380613 -25624043 + SAR_DM Satellite Satellite 539 789 -683 7 610 1035 168 28 12 chrUextra 3380624 3380871 -25623785 + SAR_DM Satellite Satellite 539 789 -683 7 610 1074 178 18 7 chrUextra 3380882 3381323 -25623333 + SAR_DM Satellite Satellite 1 446 -678 7 610 730 12 0 0 chrUextra 3382489 3382575 -25622081 + DIVER_I LTR Pao 5558 5643 0 7 610 1927 5 0 0 chrUextra 3382575 3382799 -25621857 + DIVER_LTR LTR Pao 1 224 0 7 610 404 39 0 0 chrUextra 3382819 3382870 -25621786 - CIRCE LINE Composite -4878 1478 1428 7 610 641 92 20 10 chrUextra 3382870 3382969 -25621687 + STALKER4_LTR LTR Gypsy 280 379 -23 7 610 25 0 0 0 chrUextra 3383083 3383108 -25621548 + AT_rich Low_complexity Low_complexity 1 25 0 7 610 1547 187 0 0 chrUextra 3383136 3383452 -25621204 + STALKER4_I LTR Gypsy 235 550 -5980 7 610 1144 44 0 0 chrUextra 3383582 3383741 -25620915 - G2_DM LINE Jockey -10 3092 2934 7 610 2181 80 40 0 chrUextra 3383737 3384064 -25620592 + G2_DM LINE Jockey 2527 2866 -236 7 610 3476 31 70 0 chrUextra 3384059 3384515 -25620141 + G2_DM LINE Jockey 1551 2038 -1064 7 610 2341 88 335 12 chrUextra 3384615 3385458 -25619198 + R1-2_DM LINE R1 32 1147 -2069 7 610 558 171 28 9 chrUextra 3385460 3385566 -25619090 + R1-2_DM LINE R1 2205 2312 -904 7 610 3061 3 3 3 chrUextra 3385678 3386047 -25618609 + DM297_I LTR Gypsy 286 654 -5513 7 610 5053 5 0 0 chrUextra 3386037 3386641 -25618015 + DM297_I LTR Gypsy 4942 5545 -622 7 610 2244 0 4 0 chrUextra 3386741 3387007 -25617649 - Copia_I LTR Copia -4326 267 1 7 610 2200 7 4 4 chrUextra 3387007 3387283 -25617373 - Copia_LTR LTR Copia 0 276 1 7 610 2483 41 3 0 chrUextra 3387369 3387685 -25616971 - PROTOP DNA P 0 4480 4164 7 610 3539 181 25 19 chrUextra 3387814 3388753 -25615903 - SAR_DM Satellite Satellite -872 944 1 7 610 7518 3 19 26 chrUextra 3388867 3389830 -25614826 + ROVER-I_DM LTR Gypsy 473 1428 -5156 7 610 4582 2 0 0 chrUextra 3389930 3390455 -25614201 - LSU-rRNA_Dme rRNA rRNA -1588 2312 1788 7 610 3266 0 10 2 chrUextra 3390499 3390893 -25613763 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1392 7 610 1056 0 0 8 chrUextra 3390993 3391122 -25613534 + R1_DM LINE R1 4939 5066 -290 7 610 916 44 0 0 chrUextra 3391119 3391233 -25613423 + R1_DM LINE R1 5243 5356 0 7 610 4549 67 3 3 chrUextra 3391267 3391884 -25612772 + R1_DM LINE R1 1 617 -4739 7 610 530 28 14 14 chrUextra 3391883 3391956 -25612700 + R1_DM LINE R1 1101 1173 -4183 7 610 4319 198 42 8 chrUextra 3392056 3393019 -25611637 + HETA LINE telomeric 686 1680 -4401 7 610 853 67 0 0 chrUextra 3393123 3393242 -25611414 + TART LINE telomeric 10545 10663 -3814 7 610 4054 57 0 30 chrUextra 3393241 3393839 -25610817 + TART LINE telomeric 630 1209 -13268 7 610 1716 34 49 33 chrUextra 3393839 3394082 -25610574 + PROTOP_A DNA P 1 247 -858 7 610 2353 48 3 0 chrUextra 3394182 3394498 -25610158 + DOC3_DM LINE Jockey 1474 1790 -2950 7 610 3486 32 7 0 chrUextra 3394714 3395145 -25609511 + DMRT1B LINE R1 1 434 -4749 7 610 676 259 21 55 chrUextra 3395912 3396149 -25608507 - Invader1_I LTR Gypsy -583 2751 2356 7 610 3828 16 14 8 chrUextra 3396308 3396828 -25607828 + Stalker2_I LTR Gypsy 626 1148 -6254 7 610 1777 5 0 0 chrUextra 3397053 3397271 -25607385 + Stalker2_I LTR Gypsy 1132 1349 -6053 7 610 4208 238 0 0 chrUextra 3397371 3398334 -25606322 - Gypsy6_I LTR Gypsy -3304 3708 2746 7 610 1909 92 103 2 chrUextra 3398434 3398901 -25605755 - S_DM DNA Tc1 -1222 514 1 7 610 441 177 0 30 chrUextra 3398985 3399084 -25605572 - DNAREP1_DM LINE Penelope -236 358 263 7 610 400 145 0 0 chrUextra 3399310 3399379 -25605277 - DNAREP1_DM LINE Penelope -349 245 177 7 610 458 225 18 128 chrUextra 3399500 3399719 -25604937 + TIRANT_LTR LTR Gypsy 115 309 -108 7 610 1879 79 4 0 chrUextra 3400040 3400305 -25604351 + Baggins1 LINE LOA 4762 5027 -426 7 610 359 305 70 29 chrUextra 3400576 3400920 -25603736 - QUASIMODO_I LTR Gypsy -5320 740 383 7 610 22 0 0 0 chrUextra 3401208 3401230 -25603426 + AT_rich Low_complexity Low_complexity 1 22 0 7 610 506 299 16 12 chrUextra 3401266 3401510 -25603146 + HMSBEAGLE_I LTR Gypsy 4838 5082 -1447 7 610 4787 0 0 0 chrUextra 3402686 3403244 -25601412 + FW_DM LINE Jockey 4135 4692 0 7 610 3481 5 0 0 chrUextra 3403244 3403649 -25601007 - DMRT1B LINE R1 -2785 2398 1994 7 610 3043 112 115 6 chrUextra 3403751 3404291 -25600365 + TAHRE LINE telomeric 1074 1672 -8791 7 610 562 70 68 23 chrUextra 3404285 3404373 -25600283 + ACCORD2_LTR LTR Gypsy 124 215 0 7 610 1566 119 8 0 chrUextra 3404373 3404617 -25600039 + HETA LINE telomeric 2432 2677 -3404 7 610 590 152 0 0 chrUextra 3404613 3404712 -25599944 + HETA LINE telomeric 2959 3057 -3024 7 610 721 11 11 0 chrUextra 3404812 3404903 -25599753 + NTS_DM Other Other 42 133 -107 7 610 1252 18 0 6 chrUextra 3404903 3405068 -25599588 + NTS_DM Other Other 38 201 -39 7 610 21 57 0 0 chrUextra 3405068 3405103 -25599553 + AT_rich Low_complexity Low_complexity 1 35 0 7 610 832 9 9 27 chrUextra 3405129 3405240 -25599416 + NTS_DM Other Other 25 133 -107 7 610 1150 22 113 21 chrUextra 3405240 3405426 -25599230 + NTS_DM Other Other 38 240 0 7 610 1756 17 17 17 chrUextra 3405426 3405666 -25598990 + NTS_DM Other Other 1 240 0 7 610 925 9 0 0 chrUextra 3405666 3405774 -25598882 + NTS_DM Other Other 1 108 -132 7 610 2438 24 0 0 chrUextra 3405874 3406167 -25598489 + R1_DM LINE R1 5064 5356 0 7 610 4471 65 57 3 chrUextra 3406200 3406835 -25597821 + R1_DM LINE R1 1 669 -4687 7 76 2426 87 26 32 chrUextra 3406936 3407896 -25596760 + DMSAT6 Satellite Satellite 1 953 -97 7 611 7948 18 0 1 chrUextra 3407998 3408960 -25595696 + DOC2_DM LINE Jockey 2740 3700 -1093 7 611 1804 0 0 0 chrUextra 3409060 3409269 -25595387 + DM297_LTR LTR Gypsy 206 414 0 7 611 3054 3 0 24 chrUextra 3409275 3409651 -25595005 + ROVER-LTR_DM LTR Gypsy 1 367 0 7 611 3064 0 0 3 chrUextra 3409651 3410020 -25594636 + ROVER-I_DM LTR Gypsy 1 368 -6216 7 611 745 0 0 0 chrUextra 3410122 3410208 -25594448 - FW_DM LINE Jockey -2283 2409 2324 7 611 3716 2 0 0 chrUextra 3410203 3410632 -25594024 - FW_DM LINE Jockey -4263 429 1 7 611 2017 183 7 7 chrUextra 3410633 3411084 -25593572 - SAR_DM Satellite Satellite -592 880 430 7 611 221 208 38 0 chrUextra 3411663 3411716 -25592940 + (CATA)n Simple_repeat Simple_repeat 1 55 0 7 611 5549 106 83 4 chrUextra 3412246 3413206 -25591450 + Gypsy12_I LTR Gypsy 3240 4275 -1271 7 611 1587 5 0 0 chrUextra 3413308 3413511 -25591145 + (TTATA)n Simple_repeat Simple_repeat 1 203 0 7 611 1167 112 0 0 chrUextra 3413514 3413693 -25590963 + (TATTG)n Simple_repeat Simple_repeat 2 180 0 7 611 1512 24 0 5 chrUextra 3413700 3414091 -25590565 + (TTATA)n Simple_repeat Simple_repeat 1 388 0 7 611 1227 35 6 17 chrUextra 3414096 3414270 -25590386 + BLASTOPIA_LTR LTR Gypsy 1 172 -103 7 611 180 239 0 0 chrUextra 3414985 3415148 -25589508 + (TTTG)n Simple_repeat Simple_repeat 4 166 0 7 611 233 0 0 161 chrUextra 3415120 3415331 -25589325 + (TTGTG)n Simple_repeat Simple_repeat 4 180 0 7 611 2117 26 0 25 chrUextra 3415432 3415711 -25588945 + BATUMI_I LTR Pao 7013 7284 -679 7 611 2886 29 18 0 chrUextra 3415709 3416090 -25588566 - PROTOP DNA P -2431 2049 1662 7 611 2303 27 3 0 chrUextra 3416099 3416394 -25588262 - PROTOP DNA P -3893 587 292 7 611 3089 3 0 0 chrUextra 3416494 3416850 -25587806 - DOC LINE Jockey -4366 359 4 7 611 1663 177 25 11 chrUextra 3416852 3417415 -25587241 - SAR_DM Satellite Satellite -542 571 1 7 611 7602 21 59 1 chrUextra 3417556 3418518 -25586138 + DOC2_DM LINE Jockey 1930 2947 -1846 7 611 2106 8 11 19 chrUextra 3418618 3418882 -25585774 + DM1731_I LTR Copia 3715 3976 0 7 611 2644 42 0 0 chrUextra 3418882 3419218 -25585438 + DM1731_LTR LTR Copia 1 336 0 7 611 1557 17 8 3 chrUextra 3419218 3419580 -25585076 + (TTATA)n Simple_repeat Simple_repeat 1 364 0 7 611 2221 171 16 9 chrUextra 3419680 3420636 -25584020 - SAR_DM Satellite Satellite -682 961 1 7 611 3135 84 6 4 chrUextra 3420742 3421244 -25583412 - S_DM DNA Tc1 -1233 503 1 7 611 2464 44 0 6 chrUextra 3421244 3421566 -25583090 - MDG1_I LTR Gypsy -2667 3929 3610 7 611 645 95 0 9 chrUextra 3421567 3421673 -25582983 - MDG1_I LTR Gypsy -5246 1350 1246 7 611 30 0 0 0 chrUextra 3421879 3421909 -25582747 + AT_rich Low_complexity Low_complexity 1 30 0 7 611 30 83 0 0 chrUextra 3422477 3422549 -25582107 + AT_rich Low_complexity Low_complexity 1 72 0 7 611 2398 98 12 56 chrUextra 3422886 3423825 -25580831 + DMSAT6 Satellite Satellite 1 897 0 7 611 7373 16 26 5 chrUextra 3423928 3424890 -25579766 - IDEFIX_I LTR Gypsy -1055 4573 3592 7 611 1882 14 0 0 chrUextra 3424990 3425212 -25579444 - BATUMI_I LTR Pao -7741 222 1 7 611 1671 42 4 44 chrUextra 3425212 3425463 -25579193 - BATUMI_LTR LTR Pao 0 272 32 7 611 1547 219 102 6 chrUextra 3425479 3425952 -25578704 + ROVER-I_DM LTR Gypsy 3241 3758 -2826 7 611 932 79 6 20 chrUextra 3426052 3426952 -25577704 + RSP Satellite Satellite 1 888 0 7 611 277 0 0 0 chrUextra 3427117 3427152 -25577504 + PROTOP DNA P 248 282 -4198 7 611 6867 28 7 17 chrUextra 3427151 3428076 -25576580 + PROTOP DNA P 388 1302 -3178 7 611 430 170 19 0 chrUextra 3428176 3428282 -25576374 + ARS406_DM Unknown Unknown 11 118 -235 7 611 1109 172 26 9 chrUextra 3428278 3429041 -25575615 - SAR_DM Satellite Satellite -680 775 1 7 611 390 136 25 0 chrUextra 3429052 3429133 -25575523 - SAR_DM Satellite Satellite -1043 429 347 7 611 2982 36 169 14 chrUextra 3429238 3429820 -25574836 - PROTOP_B DNA P -480 673 1 7 611 276 95 0 0 chrUextra 3429820 3429858 -25574798 + STALKER4_LTR LTR Gypsy 48 85 -317 7 611 245 0 65 22 chrUextra 3429858 3429904 -25574752 + (TAA)n Simple_repeat Simple_repeat 1 48 0 7 611 45 55 0 0 chrUextra 3430071 3430144 -25574512 + AT_rich Low_complexity Low_complexity 1 73 0 7 611 1620 0 0 0 chrUextra 3430305 3430485 -25574171 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 7 611 732 128 24 28 chrUextra 3430485 3430773 -25573883 + CT-rich Low_complexity Low_complexity 1 286 0 7 611 783 106 39 28 chrUextra 3430816 3431098 -25573558 + GA-rich Low_complexity Low_complexity 1 285 0 7 611 2934 188 23 13 chrUextra 3431361 3432321 -25572335 + SAR_DM Satellite Satellite 1 969 -208 7 611 7878 9 0 9 chrUextra 3432422 3433383 -25571273 - STALKER4_I LTR Gypsy -787 5743 4792 7 611 918 244 19 55 chrUextra 3433483 3433795 -25570861 + Gypsy12_LTR LTR Gypsy 228 528 -1808 7 611 444 221 31 38 chrUextra 3434154 3434314 -25570342 + Gypsy12_LTR LTR Gypsy 920 1078 -1258 7 611 352 263 17 9 chrUextra 3434326 3434441 -25570215 + Gypsy12_LTR LTR Gypsy 1158 1273 -1063 7 611 4518 83 104 12 chrUextra 3434544 3435260 -25569396 + Gypsy12_I LTR Gypsy 4765 5546 0 7 611 1225 171 12 25 chrUextra 3435260 3435505 -25569151 + Gypsy12_LTR LTR Gypsy 1 242 -2094 7 611 3511 201 19 26 chrUextra 3436666 3437627 -25567029 + SAR_DM Satellite Satellite 1 953 -203 7 611 3519 108 100 81 chrUextra 3438788 3439749 -25564907 + BATUMI_I LTR Pao 13 991 -6972 7 611 8142 5 15 0 chrUextra 3439849 3440810 -25563846 - MDG3_I LTR Gypsy -3747 1239 265 7 611 4942 41 3 2 chrUextra 3441971 3442606 -25562050 + R1_DM LINE R1 824 1459 -3897 7 611 2730 30 0 0 chrUextra 3442597 3442930 -25561726 + R1_DM LINE R1 1402 1734 -3622 7 611 7917 40 9 3 chrUextra 3443032 3443992 -25560664 - MAX_I LTR Pao -4715 3199 2234 7 611 7823 28 113 1 chrUextra 3444092 3445052 -25559604 - R1_DM LINE R1 -2901 2455 1388 7 611 5493 2 0 0 chrUextra 3445152 3445754 -25558902 - DOC LINE Jockey -4120 605 4 7 611 3118 6 3 3 chrUextra 3445756 3446112 -25558544 + Invader3_I LTR Gypsy 3079 3434 -1454 7 611 989 86 6 18 chrUextra 3446222 3447156 -25557500 - RSP Satellite Satellite 0 923 1 7 611 2491 115 25 9 chrUextra 3447272 3448232 -25556424 - DMSAT6 Satellite Satellite -51 975 1 7 611 3834 191 22 21 chrUextra 3448332 3449292 -25555364 - SAR_DM Satellite Satellite -446 1026 66 7 611 8104 1 36 0 chrUextra 3449392 3450352 -25554304 - ROO_I LTR Pao -7051 1205 211 7 611 1824 0 0 0 chrUextra 3450456 3450662 -25553994 + Copia_I LTR Copia 4388 4593 0 7 611 2116 4 57 4 chrUextra 3450662 3450891 -25553765 + Copia_LTR LTR Copia 1 228 -48 7 611 216 0 0 0 chrUextra 3450891 3450915 -25553741 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 7 611 2116 4 57 4 chrUextra 3450915 3450947 -25553709 + Copia_LTR LTR Copia 229 274 -2 7 611 282 279 12 0 chrUextra 3452137 3452223 -25552433 + Gypsy5_I LTR Gypsy 5198 5284 -1225 7 611 3788 204 16 18 chrUextra 3452572 3453531 -25551125 - SAR_DM Satellite Satellite -404 956 1 7 611 1699 104 17 64 chrUextra 3454801 3455099 -25549557 - Gypsy6A_LTR LTR Gypsy -118 302 19 7 611 4712 25 0 0 chrUextra 3455103 3455651 -25549005 - MDG1_I LTR Gypsy -2500 4096 3549 7 611 4837 26 112 35 chrUextra 3455752 3456712 -25547944 + DMCR1A LINE CR1 2460 3493 -977 7 611 4077 196 12 20 chrUextra 3456813 3457768 -25546888 + SAR_DM Satellite Satellite 1 947 -203 7 611 4250 8 0 0 chrUextra 3457872 3458356 -25546300 - QUASIMODO_LTR LTR Gypsy -174 484 1 7 611 3064 38 9 16 chrUextra 3458356 3458786 -25545870 - QUASIMODO_I LTR Gypsy 0 6060 5634 7 611 326 0 0 0 chrUextra 3458791 3458832 -25545824 - QUASIMODO_I LTR Gypsy -789 5271 5231 7 611 5669 9 0 0 chrUextra 3458932 3459564 -25545092 - LSU-rRNA_Dme rRNA rRNA -687 3213 2582 7 611 2675 20 0 0 chrUextra 3459584 3459889 -25544767 - R2_DM LINE R2 -333 3274 2970 7 611 4557 4 0 2 chrUextra 3459992 3460506 -25544150 + FW_DM LINE Jockey 4177 4689 -3 7 611 4026 2 2 0 chrUextra 3460504 3460952 -25543704 - DOC LINE Jockey -2003 2722 2274 7 611 3760 187 20 24 chrUextra 3461052 3462005 -25542651 + SAR_DM Satellite Satellite 198 1146 -326 7 611 2175 38 4 0 chrUextra 3462120 3462387 -25542269 + DMCR1A LINE CR1 4203 4470 0 7 611 1123 82 3 3 chrUextra 3462808 3462976 -25541680 + FW2_DM LINE Jockey 1 156 -3805 7 611 589 77 143 0 chrUextra 3462978 3463069 -25541587 + FW2_DM LINE Jockey 384 487 -3474 7 611 7087 97 1 0 chrUextra 3463171 3464130 -25540526 - Gypsy12_I LTR Gypsy -1411 4135 3176 7 611 1566 5 0 69 chrUextra 3464230 3464432 -25540224 + DM176_LTR LTR Gypsy 96 283 -224 7 611 2029 32 16 0 chrUextra 3464433 3464686 -25539970 + DM176_LTR LTR Gypsy 251 507 0 7 611 28 0 0 0 chrUextra 3464686 3464714 -25539942 + AT_rich Low_complexity Low_complexity 1 28 0 7 611 3933 32 0 0 chrUextra 3464715 3465189 -25539467 - ROO_I LTR Pao -2741 5515 5042 7 611 289 318 95 0 chrUextra 3465483 3465609 -25539047 - OSVALDO_I LTR Gypsy -4172 2481 2344 7 611 438 293 23 0 chrUextra 3465702 3465876 -25538780 - OSVALDO_I LTR Gypsy -4570 2083 1906 7 611 342 123 173 27 chrUextra 3465874 3465949 -25538707 - Gypsy8_I LTR Gypsy -3330 1017 932 7 611 1481 88 15 0 chrUextra 3465938 3466142 -25538514 - Gypsy8_I LTR Gypsy -3867 480 274 7 611 424 223 79 42 chrUextra 3466033 3466248 -25538408 + DMSAT6 Satellite Satellite 117 339 -131 7 611 690 132 0 0 chrUextra 3466348 3466462 -25538194 - ARS406_DM Unknown Unknown -239 114 1 7 611 3975 192 11 17 chrUextra 3466369 3467299 -25537357 + SAR_DM Satellite Satellite 195 1118 -354 7 611 275 206 0 0 chrUextra 3467244 3467307 -25537349 - XDMR Unknown Unknown 0 361 299 7 611 3317 221 20 25 chrUextra 3467407 3468366 -25536290 - SAR_DM Satellite Satellite -488 954 1 7 611 7319 28 33 3 chrUextra 3468466 3469384 -25535272 - PROTOP_A DNA P -88 1017 73 7 611 339 43 22 0 chrUextra 3469379 3469425 -25535231 + ROVER-I_DM LTR Gypsy 5141 5187 -1397 7 611 5702 85 22 0 chrUextra 3469526 3470280 -25534376 + Gypsy12_I LTR Gypsy 2947 3717 -1829 7 611 1263 122 0 0 chrUextra 3470301 3470482 -25534174 + Gypsy12_I LTR Gypsy 3830 4010 -1536 7 611 8161 20 3 0 chrUextra 3470585 3471543 -25533113 - STALKER4_I LTR Gypsy -3777 2753 1793 7 611 4799 101 76 32 chrUextra 3471643 3472526 -25532130 + PROTOP_B DNA P 232 1153 0 7 611 1049 170 143 70 chrUextra 3473081 3473353 -25531303 + G3_DM LINE Jockey 221 512 -4093 7 611 505 299 60 14 chrUextra 3473358 3473575 -25531081 + DIVER2_I LTR Pao 1593 1819 -2328 7 611 1267 20 13 0 chrUextra 3473761 3473913 -25530743 - DM176_I LTR Gypsy -6266 154 1 7 611 3094 49 59 47 chrUextra 3473913 3474401 -25530255 - DM176_LTR LTR Gypsy -27 480 1 7 611 2419 44 35 0 chrUextra 3474405 3474720 -25529936 + IDEFIX_I LTR Gypsy 2176 2501 -3127 7 611 3860 201 11 19 chrUextra 3474820 3475775 -25528881 + SAR_DM Satellite Satellite 301 1248 -224 7 611 1353 62 0 0 chrUextra 3476224 3476451 -25528205 + (TCTTG)n Simple_repeat Simple_repeat 1 227 0 7 611 4410 6 2 0 chrUextra 3477408 3477897 -25526759 + Gypsy4_I LTR Gypsy 2421 2910 -3378 7 611 3432 150 192 18 chrUextra 3478048 3478955 -25525701 + STALKER4_I LTR Gypsy 1198 2263 -4267 7 611 3929 169 29 28 chrUextra 3479056 3479983 -25524673 - SAR_DM Satellite Satellite -365 1107 180 7 611 951 73 0 0 chrUextra 3479877 3480013 -25524643 + ARS406_DM Unknown Unknown 1 136 -217 7 611 8129 4 80 0 chrUextra 3480113 3481071 -25523585 + DMRT1B LINE R1 3678 4712 -471 7 611 3998 193 14 24 chrUextra 3481171 3482129 -25522527 - SAR_DM Satellite Satellite -372 948 1 7 611 3560 107 190 0 chrUextra 3482229 3483187 -25521469 + IDEFIX_I LTR Gypsy 3639 4779 -849 7 611 2536 181 9 3 chrUextra 3483287 3484245 -25520411 - SAR_DM Satellite Satellite -436 963 1 7 611 8628 2 20 1 chrUextra 3484345 3485303 -25519353 - Gypsy6_I LTR Gypsy -2722 4290 3315 7 611 2527 82 46 2 chrUextra 3485403 3485817 -25518839 + TART LINE telomeric 9305 9736 -4741 7 611 457 257 43 14 chrUextra 3485813 3485951 -25518705 + TAHRE LINE telomeric 9756 9897 -566 7 611 3262 34 0 5 chrUextra 3485951 3486361 -25518295 + TRANSIB2 DNA Transib 1 408 -2436 7 611 8260 24 5 3 chrUextra 3486461 3487419 -25517237 - BATUMI_I LTR Pao -2022 5941 4982 7 611 3596 198 22 28 chrUextra 3487519 3488472 -25516184 - SAR_DM Satellite Satellite -469 1003 57 7 611 6049 61 50 26 chrUextra 3488577 3489535 -25515121 + STALKER4_I LTR Gypsy 667 1647 -4883 7 611 24 96 0 0 chrUextra 3490125 3490198 -25514458 + AT_rich Low_complexity Low_complexity 1 73 0 7 611 756 180 328 51 chrUextra 3490693 3490986 -25513670 + TART LINE telomeric 10118 10491 -3986 7 611 3472 60 49 39 chrUextra 3491113 3491620 -25513036 + PROTOP DNA P 1 512 -3968 7 611 2548 68 171 2 chrUextra 3491751 3492393 -25512263 + STALKER4_I LTR Gypsy 4846 5596 -934 7 611 2428 47 88 0 chrUextra 3492390 3492709 -25511947 + Baggins1 LINE LOA 1 347 -5106 7 611 7025 76 27 1 chrUextra 3492809 3493767 -25510889 + DM412 LTR Gypsy 1984 2966 -3931 7 611 3407 3 0 0 chrUextra 3494925 3495305 -25509351 - Copia_I LTR Copia -4213 380 1 7 611 2329 14 0 0 chrUextra 3495305 3495581 -25509075 - Copia_LTR LTR Copia 0 276 1 7 611 2459 3 3 3 chrUextra 3495581 3495883 -25508773 + QUASIMODO_I LTR Gypsy 4764 5065 -995 7 611 343 57 0 70 chrUextra 3495995 3496052 -25508604 + DNAREP1_DM LINE Penelope 508 560 -34 7 611 32 43 0 0 chrUextra 3496071 3496117 -25508539 + AT_rich Low_complexity Low_complexity 1 46 0 7 611 363 360 4 1 chrUextra 3496641 3496885 -25507771 - BURDOCK_I LTR Gypsy -4878 982 737 7 611 8023 32 5 0 chrUextra 3497041 3497999 -25506657 - R1_DM LINE R1 -2040 3316 2354 7 611 7706 4 26 48 chrUextra 3498099 3499056 -25505600 - LSU-rRNA_Dme rRNA rRNA -1428 2472 1537 7 611 456 331 18 13 chrUextra 3499260 3499534 -25505122 - GTWIN_I LTR Gypsy -2883 3538 3347 7 611 594 317 20 8 chrUextra 3499526 3499777 -25504879 - GTWIN_I LTR Gypsy -2914 3507 3254 7 611 283 279 0 0 chrUextra 3499909 3499988 -25504668 - DM176_I LTR Gypsy -3175 3245 3167 7 611 403 70 0 0 chrUextra 3500056 3500113 -25504543 - TLD2 Unknown Unknown 0 218 162 7 611 7645 19 2 3 chrUextra 3500290 3501170 -25503486 - DOC2_DM LINE Jockey 0 4793 3915 7 611 940 45 0 0 chrUextra 3502115 3502227 -25502429 - DM1731_LTR LTR Copia 0 336 225 7 611 8245 22 2 3 chrUextra 3502327 3503284 -25501372 - Gypsy4_I LTR Gypsy -912 5376 4421 7 611 869 95 0 0 chrUextra 3503384 3503510 -25501146 - ARS406_DM Unknown Unknown -227 126 1 7 611 4223 184 7 22 chrUextra 3503414 3504340 -25500316 + SAR_DM Satellite Satellite 192 1103 -369 7 611 3724 5 0 2 chrUextra 3504441 3504855 -25499801 - R1_DM LINE R1 -139 5217 4805 7 611 4761 4 0 6 chrUextra 3504869 3505398 -25499258 - R1_DM LINE R1 0 5356 4831 7 611 4251 183 27 21 chrUextra 3505499 3506455 -25498201 + SAR_DM Satellite Satellite 252 1213 -259 7 611 307 139 59 157 chrUextra 3506555 3506708 -25497948 - BATUMI_I LTR Pao -7223 740 603 7 611 3311 31 26 0 chrUextra 3506723 3507106 -25497550 + Invader6_LTR LTR Gypsy 1 393 0 7 611 3761 5 2 0 chrUextra 3507106 3507512 -25497144 + Invader6_I LTR Gypsy 1 407 -3692 7 611 4268 16 71 24 chrUextra 3507612 3508569 -25496087 - CIRCE LINE Composite -1766 4590 3589 7 611 2371 216 34 41 chrUextra 3508669 3509626 -25495030 + SAR_DM Satellite Satellite 1 950 -414 7 611 335 127 18 0 chrUextra 3509726 3509781 -25494875 + ARS406_DM Unknown Unknown 132 187 -166 7 611 3119 202 19 19 chrUextra 3509740 3510683 -25493973 - SAR_DM Satellite Satellite -975 943 1 7 611 3397 194 11 16 chrUextra 3510785 3511739 -25492917 + SAR_DM Satellite Satellite 1 949 -216 7 611 1620 24 0 0 chrUextra 3511841 3512266 -25492390 + (TTATA)n Simple_repeat Simple_repeat 1 425 0 7 611 1870 21 17 17 chrUextra 3512308 3512548 -25492108 + NTS_DM Other Other 1 240 0 7 611 1797 38 17 17 chrUextra 3512548 3512788 -25491868 + NTS_DM Other Other 1 240 0 7 611 1175 231 92 3 chrUextra 3513954 3514270 -25490386 - Invader3_I LTR Gypsy -2839 2049 1706 7 611 693 78 47 37 chrUextra 3514270 3514377 -25490279 - PROTOP_B DNA P 0 1153 1046 7 611 258 191 0 0 chrUextra 3514378 3514425 -25490231 - Invader3_I LTR Gypsy -3417 1471 1425 7 611 1829 235 117 12 chrUextra 3514410 3514905 -25489751 - Invader3_I LTR Gypsy -4039 849 303 7 611 2492 89 19 53 chrUextra 3515036 3515523 -25489133 + DMSAT6 Satellite Satellite 1 470 0 7 611 2416 101 23 12 chrUextra 3515539 3515968 -25488688 + DMSAT6 Satellite Satellite 1 434 -36 7 611 4585 8 0 0 chrUextra 3516092 3516599 -25488057 - DM176_LTR LTR Gypsy 0 507 1 7 611 3800 0 0 0 chrUextra 3516601 3517024 -25487632 - LSU-rRNA_Dme rRNA rRNA -2976 924 502 7 611 26 30 0 0 chrUextra 3517124 3517157 -25487499 + AT_rich Low_complexity Low_complexity 1 33 0 7 611 4668 22 15 0 chrUextra 3517534 3518080 -25486576 - PROTOP_A DNA P 0 1105 552 7 611 4474 32 66 2 chrUextra 3518180 3518767 -25485889 - FW_DM LINE Jockey -4067 625 1 7 611 2947 40 0 17 chrUextra 3518775 3519135 -25485521 + R1_DM LINE R1 1377 1730 -3626 7 611 3493 110 60 14 chrUextra 3519236 3519811 -25484845 + HETA LINE telomeric 2955 3708 -2373 7 611 2165 118 66 19 chrUextra 3519828 3520192 -25484464 + HETA LINE telomeric 3982 4362 -1719 7 611 1065 29 0 42 chrUextra 3520746 3520890 -25483766 - NTS_DM Other Other -78 162 25 7 611 268 196 0 19 chrUextra 3520960 3521012 -25483644 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 7 611 1603 41 0 10 chrUextra 3521050 3521248 -25483408 + G_DM LINE Jockey 2653 2848 -1498 7 611 7916 29 3 8 chrUextra 3521348 3522303 -25482353 - NINJA_I LTR Pao -3369 2642 1693 7 611 1361 30 12 0 chrUextra 3522404 3522571 -25482085 - BATUMI_I LTR Pao -1368 6595 6427 7 611 1384 53 0 0 chrUextra 3522594 3522782 -25481874 + BATUMI_I LTR Pao 7303 7490 -473 7 611 5024 17 7 0 chrUextra 3522779 3523360 -25481296 - STALKER4_I LTR Gypsy -3863 2667 2083 7 611 8896 2 1 0 chrUextra 3523460 3524416 -25480240 - Gypsy2_I LTR Gypsy -497 5638 4682 7 611 1929 5 0 0 chrUextra 3524516 3524729 -25479927 + Copia_I LTR Copia 4381 4593 0 7 611 2443 7 0 0 chrUextra 3524729 3525005 -25479651 + Copia_LTR LTR Copia 1 276 0 7 611 251 0 0 0 chrUextra 3525005 3525039 -25479617 + Copia_LTR LTR Copia 243 276 0 7 611 712 306 41 48 chrUextra 3525080 3525472 -25479184 + MICROPIA_I LTR Gypsy 1936 2324 -2152 7 611 5510 99 5 18 chrUextra 3525679 3526513 -25478143 + M4DM DNA Transib 406 1228 -207 7 611 764 21 0 49 chrUextra 3526629 3526731 -25477925 - NINJA_LTR LTR Pao -220 97 1 7 611 1911 14 0 0 chrUextra 3526731 3526947 -25477709 - NINJA_I LTR Pao 0 6011 5796 7 611 5329 33 2 2 chrUextra 3526953 3527584 -25477072 - NINJA_I LTR Pao -423 5588 4958 7 611 3735 202 27 24 chrUextra 3527684 3528640 -25476016 - SAR_DM Satellite Satellite -850 959 1 7 611 7278 14 156 27 chrUextra 3528740 3529696 -25474960 - QUASIMODO_I LTR Gypsy -3068 2992 1914 7 611 2487 97 22 38 chrUextra 3529796 3530752 -25473904 - DMSAT6 Satellite Satellite -162 940 1 7 611 5799 20 32 0 chrUextra 3530852 3531808 -25472848 + R1_DM LINE R1 1979 2965 -2391 7 611 1872 24 117 0 chrUextra 3531908 3532155 -25472501 + ROO_I LTR Pao 5011 5286 -2970 7 611 3539 51 33 2 chrUextra 3532135 3532587 -25472069 + ROO_I LTR Pao 5430 5895 -2361 7 611 527 40 13 51 chrUextra 3532965 3533044 -25471612 + BATUMI_LTR LTR Pao 197 272 0 7 611 205 321 0 0 chrUextra 3533105 3533186 -25471470 + CT-rich Low_complexity Low_complexity 2 82 0 7 611 2043 46 4 206 chrUextra 3533430 3533920 -25470736 + BATUMI_I LTR Pao 504 894 -7069 7 611 954 341 79 17 chrUextra 3534030 3534687 -25469969 - Invader6_I LTR Gypsy -1773 2326 1629 7 611 275 279 0 0 chrUextra 3534766 3534834 -25469822 - Invader4_I LTR Gypsy -1111 1302 1235 7 611 24 32 0 0 chrUextra 3534840 3534871 -25469785 + AT_rich Low_complexity Low_complexity 1 31 0 7 611 1469 46 0 76 chrUextra 3535082 3535292 -25469364 - DMCR1A LINE CR1 -1012 3458 3265 7 611 6451 27 0 3 chrUextra 3535292 3536032 -25468624 - DMCR1A LINE CR1 -3544 926 189 7 611 252 226 0 0 chrUextra 3536133 3536186 -25468470 - TV1I LTR Gypsy -2042 3921 3869 7 611 939 309 50 37 chrUextra 3536191 3536785 -25467871 - QUASIMODO_I LTR Gypsy -5069 991 390 7 611 351 25 0 0 chrUextra 3537188 3537237 -25467419 + MDG1_I LTR Gypsy 6558 6596 0 7 611 444 86 0 0 chrUextra 3537242 3537312 -25467344 + (TAA)n Simple_repeat Simple_repeat 3 72 0 7 611 3174 17 0 0 chrUextra 3537312 3537668 -25466988 + MDG1_LTR LTR Gypsy 87 442 0 7 611 21 36 0 0 chrUextra 3537817 3537845 -25466811 + AT_rich Low_complexity Low_complexity 1 28 0 7 611 21 89 0 0 chrUextra 3538812 3538868 -25465788 + AT_rich Low_complexity Low_complexity 1 56 0 7 611 21 57 0 0 chrUextra 3538906 3538941 -25465715 + AT_rich Low_complexity Low_complexity 1 35 0 7 612 26 30 0 0 chrUextra 3538986 3539019 -25465637 + AT_rich Low_complexity Low_complexity 1 33 0 7 612 6865 101 11 0 chrUextra 3539298 3540253 -25464403 + HETA LINE telomeric 2182 3146 -2935 7 612 2503 103 12 38 chrUextra 3540355 3541308 -25463348 - DMSAT6 Satellite Satellite -5 927 1 7 612 3641 215 32 11 chrUextra 3541408 3542356 -25462300 + SAR_DM Satellite Satellite 205 1172 -300 7 612 3596 186 38 25 chrUextra 3543519 3544473 -25460183 + SAR_DM Satellite Satellite 1 965 -208 7 612 463 179 31 39 chrUextra 3544587 3544715 -25459941 + DNAREP1_DM LINE Penelope 190 316 -278 7 612 385 281 7 7 chrUextra 3544711 3544847 -25459809 - DNAREP1_DM LINE Penelope -291 303 168 7 612 26 30 0 0 chrUextra 3544863 3544896 -25459760 + AT_rich Low_complexity Low_complexity 1 33 0 7 612 594 238 41 14 chrUextra 3544991 3545136 -25459520 + DMCR1A LINE CR1 850 998 -3472 7 612 7294 45 45 0 chrUextra 3545628 3546579 -25458077 - STALKER4_I LTR Gypsy -2031 4582 3554 7 612 2847 88 15 8 chrUextra 3546683 3547196 -25457460 - G2_DM LINE Jockey -2781 321 4 7 612 628 14 0 0 chrUextra 3547194 3547267 -25457389 + STALKER4_I LTR Gypsy 6458 6530 0 7 612 3260 30 0 0 chrUextra 3547267 3547638 -25457018 + STALKER4_LTR LTR Gypsy 1 371 -31 7 612 8628 6 7 2 chrUextra 3547738 3548693 -25455963 - TART_B1 LINE telomeric -1643 9011 8052 7 612 2297 4 0 0 chrUextra 3548793 3549042 -25455614 + G5_DM LINE Jockey 3567 3815 -1041 7 612 6213 31 1 0 chrUextra 3549032 3549748 -25454908 + G5_DM LINE Jockey 3973 4689 -167 7 612 2377 25 3 7 chrUextra 3549848 3550136 -25454520 + IDEFIX_LTR LTR Gypsy 308 594 0 7 612 25 0 0 0 chrUextra 3550314 3550339 -25454317 + AT_rich Low_complexity Low_complexity 1 25 0 7 612 1199 20 81 0 chrUextra 3550655 3550803 -25453853 + IDEFIX_I LTR Gypsy 1 160 -5468 7 612 3813 195 38 20 chrUextra 3550909 3551858 -25452798 - SAR_DM Satellite Satellite -203 1269 304 7 612 6418 44 12 0 chrUextra 3551958 3552728 -25451928 - ZAM_I LTR Gypsy -3390 4100 3322 7 612 1494 33 0 0 chrUextra 3552728 3552909 -25451747 - ZAM_I LTR Gypsy -4401 3089 2909 7 612 7328 32 1 2 chrUextra 3553013 3553871 -25450785 + G_DM LINE Jockey 2312 3168 -1178 7 612 872 20 0 0 chrUextra 3553867 3553968 -25450688 + G_DM LINE Jockey 3405 3505 -841 7 612 3709 28 0 9 chrUextra 3554068 3554502 -25450154 + BATUMI_I LTR Pao 5968 6397 -1566 7 612 3935 40 8 12 chrUextra 3554522 3555023 -25449633 - BATUMI_I LTR Pao -962 7001 6503 7 612 3816 173 55 30 chrUextra 3555123 3556071 -25448585 - SAR_DM Satellite Satellite -321 1151 180 7 612 32 43 0 0 chrUextra 3556203 3556249 -25448407 + AT_rich Low_complexity Low_complexity 1 46 0 7 612 268 340 6 6 chrUextra 3556759 3556922 -25447734 - BURDOCK_I LTR Gypsy -4878 982 820 7 612 2444 105 22 11 chrUextra 3557233 3558188 -25446468 + DMSAT6 Satellite Satellite 1 965 -108 7 612 2639 56 59 0 chrUextra 3558288 3558663 -25445993 + PROTOP_A DNA P 709 1105 0 7 612 26 30 0 0 chrUextra 3559036 3559069 -25445587 + AT_rich Low_complexity Low_complexity 1 33 0 7 612 1201 7 0 0 chrUextra 3559343 3559489 -25445167 - STALKER4_LTR LTR Gypsy -256 146 1 7 612 23 0 0 0 chrUextra 3559536 3559559 -25445097 + AT_rich Low_complexity Low_complexity 1 23 0 7 612 565 272 74 18 chrUextra 3559620 3559904 -25444752 + Copia_I LTR Copia 1653 1952 -2641 7 612 1968 12 8 0 chrUextra 3559957 3560197 -25444459 - STALKER4_LTR LTR Gypsy -91 311 70 7 612 225 242 42 42 chrUextra 3560202 3560297 -25444359 + Gypsy_DS LTR Gypsy 6122 6216 -1306 7 612 4192 14 0 0 chrUextra 3560398 3560894 -25443762 - PROTOP_A DNA P -609 496 1 7 612 1158 121 0 0 chrUextra 3561454 3561879 -25442777 + (TA)n Simple_repeat Simple_repeat 1 425 0 7 612 1405 204 5 21 chrUextra 3561924 3562406 -25442250 + Gypsy8_I LTR Gypsy 1035 1246 -3101 7 612 7338 19 2 11 chrUextra 3562507 3563461 -25441195 - IDEFIX_I LTR Gypsy -1666 3962 3017 7 612 300 0 0 0 chrUextra 3563561 3563861 -25440795 + AT_rich Low_complexity Low_complexity 1 300 0 7 612 300 0 0 0 chrUextra 3563670 3563970 -25440686 + AT_rich Low_complexity Low_complexity 1 300 0 7 612 185 5 0 0 chrUextra 3563819 3564011 -25440645 + AT_rich Low_complexity Low_complexity 1 192 0 7 612 2989 14 11 0 chrUextra 3564615 3564976 -25439680 + R1_DM LINE R1 4896 5260 -96 7 612 3935 68 40 19 chrUextra 3564974 3565569 -25439087 + R1_DM LINE R1 164 771 -4585 7 612 7465 20 37 0 chrUextra 3565669 3566623 -25438033 + STALKER4_I LTR Gypsy 2311 3299 -3231 7 612 2877 29 0 3 chrUextra 3566723 3567105 -25437551 - ROO_I LTR Pao -267 7989 7609 7 612 4849 7 0 0 chrUextra 3567105 3567677 -25436979 - ROO_I LTR Pao -1677 6579 6008 7 612 8163 1 0 1 chrUextra 3567777 3568731 -25435925 - R1_DM LINE R1 -1687 3669 2717 7 612 3886 5 0 0 chrUextra 3568831 3569276 -25435380 - GTWIN_LTR LTR Gypsy -50 445 1 7 612 4205 16 25 0 chrUextra 3569276 3569785 -25434871 - MICROPIA_I LTR Gypsy -648 3828 3307 7 612 3852 145 157 31 chrUextra 3569885 3570839 -25433817 - TART LINE telomeric -7076 7401 6328 7 612 2112 145 97 92 chrUextra 3570940 3571822 -25432834 - TART LINE telomeric -3814 10663 10040 7 612 286 152 17 0 chrUextra 3571834 3571893 -25432763 - TART LINE telomeric -4516 9961 9902 7 612 4365 10 1 66 chrUextra 3571993 3572688 -25431968 + MDG1_I LTR Gypsy 5960 6799 -98 7 612 423 100 0 0 chrUextra 3572692 3572762 -25431894 + (TAA)n Simple_repeat Simple_repeat 3 72 0 7 612 1551 16 0 0 chrUextra 3572762 3572947 -25431709 + MDG1_LTR LTR Gypsy 87 271 -171 7 612 5577 7 0 0 chrUextra 3573047 3573727 -25430929 - STALKER4_I LTR Gypsy -2799 3731 3052 7 612 2229 11 11 0 chrUextra 3573724 3574001 -25430655 - STALKER4_I LTR Gypsy -3902 2628 2349 7 612 479 122 100 0 chrUextra 3574514 3574604 -25430052 + DNAREP1_DM LINE Penelope 496 594 0 7 612 26 50 0 0 chrUextra 3574660 3574700 -25429956 + AT_rich Low_complexity Low_complexity 1 40 0 7 612 2313 80 37 37 chrUextra 3575350 3575757 -25428899 - Gypsy6A_LTR LTR Gypsy 0 420 1 7 612 1785 109 129 6 chrUextra 3575767 3576109 -25428547 - Invader1_LTR LTR Gypsy 0 423 40 7 612 4133 24 2 0 chrUextra 3576209 3576716 -25427940 - PROTOP_A DNA P -597 508 1 7 612 686 158 375 30 chrUextra 3576716 3577001 -25427655 - DNAREP1_DM LINE Penelope -20 574 193 7 612 322 200 90 0 chrUextra 3577038 3577138 -25427518 - DNAREP1_DM LINE Penelope -485 109 1 7 612 2606 3 0 0 chrUextra 3577263 3577565 -25427091 - DOC LINE Jockey -4421 304 3 7 612 5662 6 0 0 chrUextra 3577562 3578217 -25426439 + IVK_DM LINE I 3992 4646 -756 7 612 3737 187 18 22 chrUextra 3578321 3579261 -25425395 + SAR_DM Satellite Satellite 1 935 -208 7 612 3616 198 15 15 chrUextra 3579371 3580325 -25424331 - SAR_DM Satellite Satellite -676 954 1 7 612 7898 13 16 0 chrUextra 3580425 3581377 -25423279 - Invader3_I LTR Gypsy -1368 3520 2554 7 612 751 103 0 16 chrUextra 3581479 3581607 -25423049 - ARS406_DM Unknown Unknown -227 126 1 7 612 3541 182 24 26 chrUextra 3581509 3582433 -25422223 + SAR_DM Satellite Satellite 192 1113 -359 7 612 6545 59 2 15 chrUextra 3582533 3583487 -25421169 + QUASIMODO_I LTR Gypsy 994 1935 -4125 7 612 5006 0 0 0 chrUextra 3583587 3584158 -25420498 + MAX_I LTR Pao 6174 6744 -1170 7 612 3204 0 0 0 chrUextra 3584156 3584541 -25420115 + MAX_I LTR Pao 7083 7467 -447 7 612 644 35 11 0 chrUextra 3585235 3585322 -25419334 + (TTTTG)n Simple_repeat Simple_repeat 3 90 0 7 612 2432 33 0 0 chrUextra 3585695 3586001 -25418655 - QUASIMODO_I LTR Gypsy -3471 2589 2284 7 612 2365 36 3 0 chrUextra 3586004 3586310 -25418346 - QUASIMODO_I LTR Gypsy -3933 2127 1821 7 612 2384 40 3 15 chrUextra 3586319 3586649 -25418007 - QUASIMODO_I LTR Gypsy -4450 1610 1285 7 612 361 303 7 7 chrUextra 3586756 3586899 -25417757 + BURDOCK_I LTR Gypsy 850 992 -4868 7 612 5242 24 2 0 chrUextra 3587802 3588439 -25416217 + R1_DM LINE R1 4719 5356 0 7 612 2071 57 7 0 chrUextra 3588472 3588755 -25415901 + R1_DM LINE R1 1 285 -5071 7 612 1599 20 0 0 chrUextra 3588857 3589107 -25415549 + (TTATA)n Simple_repeat Simple_repeat 1 250 0 7 612 6103 0 0 1 chrUextra 3589107 3589808 -25414848 + POGO DNA Pogo 8 707 -1414 7 612 25 0 0 0 chrUextra 3589952 3589977 -25414679 + AT_rich Low_complexity Low_complexity 1 25 0 7 612 4469 12 46 0 chrUextra 3590167 3590735 -25413921 - IDEFIX_LTR LTR Gypsy 0 594 1 7 612 258 119 0 0 chrUextra 3590703 3590745 -25413911 + BARI1 DNA Tc1 3 44 -1706 7 612 423 65 65 0 chrUextra 3590755 3590848 -25413808 + (TTA)n Simple_repeat Simple_repeat 3 101 0 7 612 3029 42 3 8 chrUextra 3591153 3591540 -25413116 - DIVER2_LTR LTR Pao 0 385 1 7 612 3070 21 3 0 chrUextra 3591540 3591914 -25412742 - DIVER2_I LTR Pao 0 4147 3773 7 612 5294 0 0 2 chrUextra 3592014 3592621 -25412035 - BS2 LINE Jockey -4104 617 12 7 612 280 265 0 0 chrUextra 3592803 3592905 -25411751 - IDEFIX_I LTR Gypsy -816 4812 4711 7 612 3058 184 8 31 chrUextra 3593069 3594020 -25410636 + SAR_DM Satellite Satellite 1 928 -545 7 612 218 252 26 26 chrUextra 3594125 3594239 -25410417 + (TTTAG)n Simple_repeat Simple_repeat 3 116 0 7 612 695 181 114 124 chrUextra 3594323 3594930 -25409726 - ROVER-I_DM LTR Gypsy -5983 601 1 7 612 254 229 15 113 chrUextra 3594933 3595066 -25409590 - DMTOM1_LTR LTR Gypsy -2 408 289 7 612 7695 25 1 4 chrUextra 3595173 3596126 -25408530 + R1_DM LINE R1 1396 2345 -3011 7 612 4340 4 0 0 chrUextra 3596226 3596728 -25407928 + DMRT1B LINE R1 4682 5183 0 7 612 3751 16 0 0 chrUextra 3596735 3597179 -25407477 - R1_DM LINE R1 -760 4596 4153 7 612 3781 179 14 17 chrUextra 3597285 3598232 -25406424 - SAR_DM Satellite Satellite -425 944 1 7 612 231 36 0 0 chrUextra 3598930 3598958 -25405698 + (TTG)n Simple_repeat Simple_repeat 2 29 0 7 612 1032 26 282 0 chrUextra 3599129 3599285 -25405371 + PROTOP DNA P 1 200 -4280 7 612 25 31 0 0 chrUextra 3599754 3599786 -25404870 + AT_rich Low_complexity Low_complexity 1 32 0 7 612 2309 33 72 0 chrUextra 3600438 3600594 -25404062 + Stalker3_LTR LTR Gypsy 46 201 -171 7 612 207 0 0 0 chrUextra 3600594 3600617 -25404039 + (ATAAG)n Simple_repeat Simple_repeat 2 24 0 7 612 2309 33 72 0 chrUextra 3600617 3600765 -25403891 + Stalker3_LTR LTR Gypsy 202 370 -2 7 612 291 49 0 0 chrUextra 3600765 3600806 -25403850 + Stalker2_I LTR Gypsy 1 41 -7361 7 612 1921 149 27 0 chrUextra 3601021 3601391 -25403265 + Stalker2_I LTR Gypsy 242 621 -6781 7 612 4453 15 0 0 chrUextra 3601491 3602024 -25402632 - DMRT1B LINE R1 -242 4941 4409 7 612 1355 289 5 2 chrUextra 3602024 3602443 -25402213 + Invader1_I LTR Gypsy 1744 2163 -1023 7 612 7443 37 3 1 chrUextra 3602544 3603497 -25401159 - R1_DM LINE R1 -3633 1723 769 7 612 3561 186 15 17 chrUextra 3603597 3604550 -25400106 - SAR_DM Satellite Satellite -447 951 1 7 612 2253 118 38 15 chrUextra 3604651 3605603 -25399053 + DMSAT6 Satellite Satellite 1 974 -113 7 612 306 0 0 0 chrUextra 3605703 3605739 -25398917 + HOBO DNA hAT 869 904 -2112 7 612 4353 0 0 10 chrUextra 3605737 3606241 -25398415 + HOBO DNA hAT 2518 3016 0 7 612 7001 52 13 6 chrUextra 3606759 3607709 -25396947 + R1_DM LINE R1 234 1189 -4167 7 612 25 0 0 0 chrUextra 3608061 3608086 -25396570 + AT_rich Low_complexity Low_complexity 1 25 0 7 612 40 0 0 0 chrUextra 3608143 3608183 -25396473 + AT_rich Low_complexity Low_complexity 1 40 0 7 612 3407 199 20 16 chrUextra 3608862 3609814 -25394842 - SAR_DM Satellite Satellite -446 955 1 7 612 3560 203 13 17 chrUextra 3609915 3610863 -25393793 + SAR_DM Satellite Satellite 302 1245 -227 7 612 551 0 128 9 chrUextra 3610970 3611264 -25393392 + (TA)n Simple_repeat Simple_repeat 1 328 0 7 612 525 319 37 37 chrUextra 3611289 3611587 -25393069 - Copia2_I LTR Copia -2381 1781 1392 7 612 2368 167 18 8 chrUextra 3612022 3612530 -25392126 + SAR_DM Satellite Satellite 425 937 -535 7 612 1791 174 7 10 chrUextra 3612568 3612974 -25391682 + SAR_DM Satellite Satellite 580 984 -488 7 612 7870 16 18 2 chrUextra 3613074 3614027 -25390629 - R2_DM LINE R2 -467 3140 2173 7 612 3668 188 31 19 chrUextra 3614127 3615074 -25389582 - SAR_DM Satellite Satellite -268 1204 247 7 612 3423 117 104 107 chrUextra 3615179 3616131 -25388525 - BATUMI_I LTR Pao -6448 1515 567 7 612 2871 12 14 0 chrUextra 3616231 3616577 -25388079 + DMRT1A LINE R1 4833 5183 0 7 612 3792 183 13 16 chrUextra 3617283 3618235 -25386421 + SAR_DM Satellite Satellite 1 949 -216 7 612 2408 174 11 11 chrUextra 3618335 3618876 -25385780 - SAR_DM Satellite Satellite -436 1036 496 7 612 1835 176 2 8 chrUextra 3618891 3619287 -25385369 - SAR_DM Satellite Satellite -569 903 510 7 612 2657 3 0 0 chrUextra 3619387 3619704 -25384952 - QUASIMODO_LTR LTR Gypsy -341 317 1 7 612 519 31 0 0 chrUextra 3619704 3619768 -25384888 - QUASIMODO_I LTR Gypsy 0 6060 5997 7 612 2662 57 2 17 chrUextra 3620439 3620817 -25383839 + STALKER4_LTR LTR Gypsy 62 392 -10 7 612 2229 95 33 17 chrUextra 3620810 3621391 -25383265 - DMSAT6 Satellite Satellite -22 590 1 7 612 22 56 0 0 chrUextra 3621863 3621899 -25382757 + AT_rich Low_complexity Low_complexity 1 36 0 7 612 456 53 0 0 chrUextra 3622546 3622621 -25382035 + PROTOP DNA P 673 747 -3733 7 612 2249 15 0 0 chrUextra 3622636 3622902 -25381754 - Invader2_LTR LTR Gypsy 0 266 1 7 612 3907 34 0 2 chrUextra 3622902 3623401 -25381255 + PROTOP_A DNA P 608 1105 0 7 612 445 97 43 11 chrUextra 3623401 3623495 -25381161 + STALKER4_I LTR Gypsy 6132 6228 -302 7 612 1014 215 100 41 chrUextra 3623597 3624179 -25380477 + SAR_DM Satellite Satellite 1 616 -314 7 612 430 82 0 0 chrUextra 3624215 3624276 -25380380 + FB4_DM DNA Tc1 2 62 -4027 7 612 1047 148 120 19 chrUextra 3624239 3624544 -25380112 - FB4_DM DNA Tc1 -3376 713 384 7 612 2390 113 15 16 chrUextra 3624649 3625599 -25379057 + DMSAT6 Satellite Satellite 1 948 -29 7 612 1013 24 0 0 chrUextra 3625699 3625823 -25378833 + CIRCE LINE Composite 1759 1882 -4474 7 612 518 311 41 41 chrUextra 3625832 3626194 -25378462 + Gypsy12_I LTR Gypsy 3835 4196 -1350 7 612 4233 26 4 27 chrUextra 3625899 3626455 -25378201 + CIRCE LINE Composite 1888 2430 -3926 7 612 1521 32 0 5 chrUextra 3626455 3626645 -25378011 + PROTOP_A DNA P 1 189 -916 7 612 3404 188 37 38 chrUextra 3626753 3627614 -25377042 - TAHRE LINE telomeric -2656 7807 6948 7 612 7971 0 0 2 chrUextra 3627803 3628755 -25375901 + ROVER-I_DM LTR Gypsy 4097 5046 -1538 7 612 34 24 0 0 chrUextra 3629223 3629264 -25375392 + AT_rich Low_complexity Low_complexity 1 41 0 7 612 518 114 48 0 chrUextra 3629283 3629388 -25375268 - TART LINE telomeric -3998 10479 10370 7 612 1143 202 88 52 chrUextra 3629400 3629807 -25374849 - HETA LINE telomeric -406 5675 5254 7 612 2502 94 21 36 chrUextra 3629907 3630857 -25373799 + DMSAT6 Satellite Satellite 1 935 0 7 612 2310 113 7 35 chrUextra 3630959 3631906 -25372750 + DMSAT6 Satellite Satellite 1 920 -29 7 612 6251 45 0 1 chrUextra 3632011 3632857 -25371799 + QUASIMODO_I LTR Gypsy 3408 4252 -1808 7 612 432 119 28 47 chrUextra 3632857 3632963 -25371693 + GTWIN_LTR LTR Gypsy 1 104 -391 7 612 568 317 13 13 chrUextra 3633063 3633293 -25371363 + Gypsy6_I LTR Gypsy 6782 7011 -1 7 612 1771 78 25 67 chrUextra 3633296 3633611 -25371045 + Gypsy6A_LTR LTR Gypsy 1 302 -118 7 612 21 89 0 0 chrUextra 3634553 3634609 -25370047 + AT_rich Low_complexity Low_complexity 1 56 0 7 612 29 47 0 0 chrUextra 3634647 3634690 -25369966 + AT_rich Low_complexity Low_complexity 1 43 0 7 612 27 81 0 0 chrUextra 3634736 3634798 -25369858 + AT_rich Low_complexity Low_complexity 1 62 0 7 612 250 33 0 0 chrUextra 3635222 3635252 -25369404 + Baggins1 LINE LOA 4727 4756 -697 7 612 693 103 241 0 chrUextra 3635260 3635405 -25369251 + FB4_DM DNA Tc1 3908 4087 -2 7 612 3666 188 17 21 chrUextra 3636224 3637168 -25367488 - SAR_DM Satellite Satellite -255 1217 278 7 612 407 69 0 0 chrUextra 3637569 3637627 -25367029 - DNAREP1_DM LINE Penelope -9 585 528 7 612 488 122 16 73 chrUextra 3637631 3637755 -25366901 - DNAREP1_DM LINE Penelope -279 315 199 7 612 1124 112 0 24 chrUextra 3637753 3637995 -25366661 - DNAREP1_DM LINE Penelope -312 282 4 7 612 26 0 0 0 chrUextra 3638060 3638086 -25366570 + AT_rich Low_complexity Low_complexity 1 26 0 7 612 393 234 0 18 chrUextra 3638110 3638219 -25366437 - HOBO DNA hAT 0 3016 2910 7 612 2302 190 45 5 chrUextra 3638324 3639152 -25365504 - SAR_DM Satellite Satellite -532 861 1 7 612 622 121 73 0 chrUextra 3639142 3639266 -25365390 + ARS406_DM Unknown Unknown 50 182 -171 7 612 208 200 31 0 chrUextra 3639377 3639442 -25365214 + (TTA)n Simple_repeat Simple_repeat 2 68 0 7 612 22 35 0 0 chrUextra 3639751 3639780 -25364876 + AT_rich Low_complexity Low_complexity 1 29 0 7 612 58 15 0 0 chrUextra 3639955 3640020 -25364636 + AT_rich Low_complexity Low_complexity 1 65 0 7 612 5499 92 79 29 chrUextra 3640421 3641372 -25363284 + Gypsy12_I LTR Gypsy 53 1050 -4496 7 612 295 125 0 0 chrUextra 3641472 3641520 -25363136 - TART LINE telomeric -5267 9210 9163 7 612 2821 189 23 84 chrUextra 3641548 3642420 -25362236 - HETA LINE telomeric -2027 4054 3236 7 612 189 196 0 0 chrUextra 3643028 3643074 -25361582 + (TTCA)n Simple_repeat Simple_repeat 1 46 0 7 612 2374 178 8 8 chrUextra 3644625 3645573 -25359083 + SAR_DM Satellite Satellite 1 948 -478 7 612 3867 7 0 25 chrUextra 3645676 3646146 -25358510 + LSU-rRNA_Dme rRNA rRNA 2192 2649 -1251 7 612 2728 9 0 0 chrUextra 3646148 3646466 -25358190 + R1_DM LINE R1 5039 5356 0 7 612 1412 6 0 0 chrUextra 3646464 3646627 -25358029 + LSU-rRNA_Dme rRNA rRNA 2640 2802 -1098 7 612 4266 10 0 6 chrUextra 3646727 3647234 -25357422 - CIRCE LINE Composite -2337 4019 3516 7 612 419 119 0 0 chrUextra 3647331 3647398 -25357258 - Gypsy8_LTR LTR Gypsy -237 67 1 7 612 1027 86 6 39 chrUextra 3647400 3647581 -25357075 - Invader2_I LTR Gypsy -676 4212 3861 7 612 605 97 0 0 chrUextra 3647585 3647678 -25356978 - Invader2_I LTR Gypsy -799 3793 3701 7 612 979 73 0 0 chrUextra 3647778 3647929 -25356727 - BATUMI_I LTR Pao -510 7453 7303 7 612 3949 40 57 9 chrUextra 3647952 3648501 -25356155 + BATUMI_I LTR Pao 6427 7001 -962 7 612 2017 267 46 20 chrUextra 3647964 3648728 -25355928 - MAX_I LTR Pao -668 7246 6463 7 612 560 15 0 0 chrUextra 3648829 3648896 -25355760 - STALKER4_LTR LTR Gypsy -335 67 1 7 612 7178 25 0 5 chrUextra 3648896 3649775 -25354881 + FW_DM LINE Jockey 3240 4114 -578 7 612 2409 261 22 63 chrUextra 3649882 3650819 -25353837 - Gypsy3_I LTR Gypsy -4009 2168 1270 7 612 2667 21 0 6 chrUextra 3650944 3651272 -25353384 + G_DM LINE Jockey 2653 2978 -1368 7 612 5041 21 0 0 chrUextra 3651268 3651882 -25352774 - G2_DM LINE Jockey -2010 1092 479 7 612 3498 186 14 24 chrUextra 3651984 3652929 -25351727 - SAR_DM Satellite Satellite -879 935 1 7 612 7608 20 28 1 chrUextra 3653033 3653984 -25350672 + R1_DM LINE R1 3511 4487 -869 7 612 306 175 62 12 chrUextra 3655137 3655218 -25349438 - DMTOM1_LTR LTR Gypsy -42 368 284 7 612 254 190 17 0 chrUextra 3655235 3655293 -25349363 - DM176_LTR LTR Gypsy -141 366 308 7 612 248 133 22 0 chrUextra 3655412 3655457 -25349199 - DM176_LTR LTR Gypsy -238 269 224 7 612 894 119 0 0 chrUextra 3655561 3655704 -25348952 - DM176_I LTR Gypsy 0 6420 6278 7 612 1029 151 0 0 chrUextra 3655703 3655895 -25348761 - DM297_I LTR Gypsy -486 5681 5490 7 612 948 114 0 6 chrUextra 3655893 3656070 -25348586 - DM297_I LTR Gypsy -1433 4734 4559 7 612 2115 192 13 9 chrUextra 3656194 3657137 -25347519 - SAR_DM Satellite Satellite -417 946 1 7 612 4519 32 104 1 chrUextra 3657237 3658188 -25346468 - R1_DM LINE R1 -1798 3558 2510 7 612 389 304 35 102 chrUextra 3658589 3659238 -25345418 + HMSBEAGLE_I LTR Gypsy 2322 2927 -3602 7 612 1092 295 7 7 chrUextra 3659339 3659748 -25344908 + MICROPIA_I LTR Gypsy 1418 1838 -2261 7 612 652 306 7 7 chrUextra 3659778 3660048 -25344608 + MICROPIA_I LTR Gypsy 1897 2166 -2310 7 612 836 38 0 0 chrUextra 3660088 3660193 -25344463 + Invader2_LTR LTR Gypsy 162 266 0 7 612 545 12 12 59 chrUextra 3660193 3660278 -25344378 + Invader2_I LTR Gypsy 1 81 -4511 7 612 306 83 21 0 chrUextra 3660390 3660438 -25344218 - Gypsy12_I LTR Gypsy -3995 1551 1503 7 612 1371 86 105 0 chrUextra 3660445 3660655 -25344001 - Gypsy12_I LTR Gypsy -3992 1554 1323 7 612 2998 102 7 50 chrUextra 3660654 3661339 -25343317 - Gypsy12_I LTR Gypsy -4730 816 106 7 612 1600 19 5 0 chrUextra 3661440 3661646 -25343010 + STALKER4_I LTR Gypsy 1135 1341 -5189 7 612 1544 36 20 0 chrUextra 3661646 3661842 -25342814 + BLOOD_LTR LTR Gypsy 1 200 -199 7 612 1604 176 14 88 chrUextra 3661842 3662265 -25342391 + Gypsy3_LTR LTR Gypsy 1 392 -6 7 612 5789 76 34 36 chrUextra 3662490 3663440 -25341216 + TART LINE telomeric 2389 3336 -11141 7 612 2028 13 0 0 chrUextra 3663540 3663778 -25340878 - Invader4_I LTR Gypsy -2175 238 1 7 612 3029 3 0 0 chrUextra 3663778 3664124 -25340532 - Invader4_LTR LTR Gypsy 0 346 1 7 612 455 151 0 41 chrUextra 3664124 3664220 -25340436 + HETA LINE telomeric 3511 3602 -2479 7 612 503 244 110 8 chrUextra 3664253 3664489 -25340167 + HETA LINE telomeric 3832 4091 -1990 7 612 2728 3 6 0 chrUextra 3664590 3664920 -25339736 + IDEFIX_LTR LTR Gypsy 263 594 0 7 612 21 57 0 0 chrUextra 3665060 3665095 -25339561 + AT_rich Low_complexity Low_complexity 1 35 0 7 612 1054 139 69 5 chrUextra 3665136 3665338 -25339318 - DNAREP1_DM LINE Penelope -358 236 22 7 612 5718 73 36 33 chrUextra 3665647 3666590 -25338066 - TART LINE telomeric -11115 3362 2417 7 612 546 42 0 0 chrUextra 3666690 3666761 -25337895 + ARS406_DM Unknown Unknown 119 189 -164 7 612 3648 195 15 21 chrUextra 3666698 3667640 -25337016 - SAR_DM Satellite Satellite -242 1230 295 7 612 2896 173 10 5 chrUextra 3667743 3668687 -25335969 - SAR_DM Satellite Satellite -635 948 1 7 612 3442 182 40 25 chrUextra 3668790 3669739 -25334917 - SAR_DM Satellite Satellite -445 1027 65 7 76 2602 42 0 61 chrUextra 3669922 3670300 -25334356 + DIVER2_I LTR Pao 1223 1577 -2570 7 613 1250 32 311 0 chrUextra 3670296 3670605 -25334051 + DIVER2_I LTR Pao 3743 4147 0 7 613 1142 55 74 0 chrUextra 3670605 3670768 -25333888 + DIVER2_LTR LTR Pao 1 175 -210 7 613 7315 17 22 7 chrUextra 3670890 3671840 -25332816 - STALKER4_I LTR Gypsy -4296 2234 1271 7 613 3306 112 27 24 chrUextra 3671940 3672890 -25331766 + TART LINE telomeric 8037 8920 -5557 7 613 3201 125 74 14 chrUextra 3674063 3674615 -25330041 + HMSBEAGLE_I LTR Gypsy 4194 4778 -1751 7 613 279 103 35 0 chrUextra 3674616 3674674 -25329982 - DNAREP1_DM LINE Penelope -453 141 82 7 613 1990 107 48 0 chrUextra 3674680 3674990 -25329666 + HMSBEAGLE_I LTR Gypsy 4746 5070 -1459 7 613 4597 14 11 0 chrUextra 3675090 3675648 -25329008 - M4DM DNA Transib -871 564 1 7 613 889 96 0 0 chrUextra 3675648 3675794 -25328862 - QUASIMODO_LTR LTR Gypsy -480 178 33 7 613 828 255 21 4 chrUextra 3675791 3676027 -25328629 + ROVER-I_DM LTR Gypsy 1056 1295 -5289 7 613 277 345 0 0 chrUextra 3676324 3676489 -25328167 + (CAGT)n Simple_repeat Simple_repeat 4 168 0 7 613 201 257 0 0 chrUextra 3676799 3676908 -25327748 + (CAGT)n Simple_repeat Simple_repeat 2 110 0 7 613 279 125 236 0 chrUextra 3676945 3677089 -25327567 + (TTTAG)n Simple_repeat Simple_repeat 1 178 0 7 613 361 147 136 9 chrUextra 3677209 3677319 -25327337 + Gypsy12_LTR LTR Gypsy 1413 1536 -800 7 613 2373 107 2 52 chrUextra 3677320 3677726 -25326930 + Gypsy12_LTR LTR Gypsy 1951 2336 0 7 613 459 143 0 0 chrUextra 3677728 3677805 -25326851 + Gypsy2_I LTR Gypsy 1088 1164 -4971 7 613 2237 73 0 26 chrUextra 3677828 3678139 -25326517 + Gypsy12_I LTR Gypsy 4621 4923 -623 7 613 7370 37 0 22 chrUextra 3678240 3679190 -25325466 + BATUMI_I LTR Pao 5271 6199 -1764 7 613 8129 15 0 1 chrUextra 3679290 3680240 -25324416 + R2_DM LINE R2 1048 1996 -1611 7 613 3785 11 0 0 chrUextra 3680356 3680806 -25323850 + DM176_LTR LTR Gypsy 58 507 0 7 613 3401 52 0 0 chrUextra 3680808 3681290 -25323366 + MDG1_I LTR Gypsy 5755 6236 -360 7 613 477 81 207 0 chrUextra 3681627 3681714 -25322942 + DNAREP1_DM LINE Penelope 426 530 -64 7 613 2505 107 11 14 chrUextra 3682439 3683388 -25321268 - DMSAT6 Satellite Satellite -41 945 1 7 613 7858 29 0 0 chrUextra 3683488 3684437 -25320219 - DIVER_I LTR Pao -2415 3228 2280 7 613 5417 24 9 16 chrUextra 3684537 3685222 -25319434 - DIVER2_I LTR Pao -1301 2846 2167 7 613 1153 28 7 0 chrUextra 3685222 3685367 -25319289 - DIVER2_I LTR Pao -2097 2050 1905 7 613 928 50 0 0 chrUextra 3685367 3685486 -25319170 - DIVER2_I LTR Pao -2404 1743 1625 7 613 3155 31 0 0 chrUextra 3686635 3687020 -25317636 - BATUMI_I LTR Pao -3217 4746 4362 7 613 4358 44 2 0 chrUextra 3687035 3687584 -25317072 - BATUMI_I LTR Pao -3817 4146 3597 7 613 3020 14 0 3 chrUextra 3687684 3688048 -25316608 + STALKER4_LTR LTR Gypsy 40 402 0 7 613 2927 86 81 32 chrUextra 3688067 3688633 -25316023 + STALKER4_I LTR Gypsy 833 1426 -5104 7 613 2395 93 27 37 chrUextra 3688733 3689682 -25314974 + DMSAT6 Satellite Satellite 1 939 -28 7 613 2196 253 22 53 chrUextra 3689785 3690731 -25313925 - Stalker2_I LTR Gypsy -3218 4184 3268 7 613 1967 80 63 97 chrUextra 3690833 3691278 -25313378 - BATUMI_I LTR Pao -6785 1178 749 7 613 290 53 16 81 chrUextra 3691319 3691381 -25313275 - BATUMI_I LTR Pao -7194 769 712 7 613 355 49 49 0 chrUextra 3691383 3691444 -25313212 + (TATATG)n Simple_repeat Simple_repeat 2 65 0 7 613 2599 12 54 0 chrUextra 3691445 3691780 -25312876 + IDEFIX_LTR LTR Gypsy 1 353 -241 7 613 4024 6 0 0 chrUextra 3691880 3692350 -25312306 - R2_DM LINE R2 -2497 1110 641 7 613 4175 2 0 0 chrUextra 3692348 3692829 -25311827 - LSU-rRNA_Dme rRNA rRNA -1320 2580 2100 7 613 2194 118 13 35 chrUextra 3692938 3693402 -25311254 + DMSAT6 Satellite Satellite 17 470 0 7 613 2322 117 18 9 chrUextra 3693430 3693878 -25310778 + DMSAT6 Satellite Satellite 1 452 -18 7 613 1221 165 4 12 chrUextra 3693984 3694229 -25310427 - HETA LINE telomeric -1726 4355 4113 7 613 426 174 18 0 chrUextra 3694229 3694338 -25310318 - TAHRE LINE telomeric -3044 7419 7309 7 613 3131 144 10 12 chrUextra 3694344 3694927 -25309729 - TAHRE LINE telomeric -9 10454 9873 7 613 891 43 0 0 chrUextra 3695029 3695146 -25309510 + ARS406_DM Unknown Unknown 73 189 -164 7 613 3504 184 28 24 chrUextra 3695055 3695976 -25308680 - SAR_DM Satellite Satellite -216 1256 332 7 613 899 82 6 19 chrUextra 3696141 3697025 -25307631 - RSP Satellite Satellite 0 872 1 7 613 3739 23 50 0 chrUextra 3697125 3697604 -25307052 - PROTOP_A DNA P -602 503 1 7 613 2919 98 13 2 chrUextra 3697604 3698074 -25306582 + TART LINE telomeric 715 1189 -13288 7 613 687 179 6 50 chrUextra 3698252 3698411 -25306245 - HETRP_DM Satellite Satellite -203 1669 1518 7 613 668 179 7 14 chrUextra 3698555 3698697 -25305959 - HETRP_DM Satellite Satellite -203 1669 1529 7 613 668 179 7 14 chrUextra 3698837 3698979 -25305677 - HETRP_DM Satellite Satellite -203 1669 1529 7 613 7346 13 120 0 chrUextra 3699223 3700172 -25304484 - DOC2_DM LINE Jockey -920 3873 2811 7 613 3141 0 0 0 chrUextra 3700272 3700637 -25304019 - ACCORD_LTR LTR Gypsy -193 365 1 7 613 4999 3 0 0 chrUextra 3700637 3701221 -25303435 + Invader2_I LTR Gypsy 620 1203 -3389 7 613 193 91 0 64 chrUextra 3701369 3701416 -25303240 + T-rich Low_complexity Low_complexity 4 47 0 7 613 3675 180 15 9 chrUextra 3701416 3702264 -25302392 - SAR_DM Satellite Satellite -425 1047 195 7 613 842 10 10 0 chrUextra 3702370 3702472 -25302184 + LSU-rRNA_Dme rRNA rRNA 2481 2583 -1317 7 613 1850 4 17 13 chrUextra 3702512 3702751 -25301905 + NTS_DM Other Other 1 240 0 7 613 530 0 0 0 chrUextra 3702751 3702811 -25301845 + NTS_DM Other Other 1 60 -180 7 613 4458 2 0 0 chrUextra 3702809 3703318 -25301338 + R2_DM LINE R2 2081 2589 -1018 7 613 2444 94 32 38 chrUextra 3703418 3704365 -25300291 + DMSAT6 Satellite Satellite 1 940 -130 7 613 4512 58 40 0 chrUextra 3704466 3705072 -25299584 + TART_B1 LINE telomeric 2991 3620 -7034 7 613 2806 26 0 0 chrUextra 3705072 3705414 -25299242 + PROTOP_A DNA P 1 342 -763 7 613 4736 17 2 30 chrUextra 3706562 3707161 -25297495 - Gypsy12_LTR LTR Gypsy -1754 582 1 7 613 2386 43 3 5 chrUextra 3707161 3707486 -25297170 - Gypsy6A_LTR LTR Gypsy -12 408 1 7 613 1985 169 47 28 chrUextra 3708094 3708558 -25296098 + STALKER4_I LTR Gypsy 1044 1516 -5014 7 613 2223 95 25 30 chrUextra 3708658 3709604 -25295052 - DMSAT6 Satellite Satellite -48 941 1 7 613 3150 209 49 12 chrUextra 3709706 3710647 -25294009 + SAR_DM Satellite Satellite 242 1217 -255 7 613 3630 211 33 20 chrUextra 3710757 3712750 -25291906 - SAR_DM Satellite Satellite -300 2018 1 7 613 998 187 35 17 chrUextra 3712868 3713784 -25290872 + SAR_DM Satellite Satellite 1 932 -680 7 613 7464 35 5 2 chrUextra 3713898 3714846 -25289810 + MDG1_I LTR Gypsy 1526 2476 -4120 7 613 3838 11 2 4 chrUextra 3714946 3715422 -25289234 + DOC LINE Jockey 4251 4725 0 7 613 2417 146 13 4 chrUextra 3715425 3715894 -25288762 - SAR_DM Satellite Satellite -627 845 373 7 613 2979 202 37 25 chrUextra 3716007 3716942 -25287714 + TART LINE telomeric 8037 9261 -1202 7 613 2378 17 0 0 chrUextra 3717042 3717333 -25287323 + FW_DM LINE Jockey 4392 4682 -10 7 613 1094 139 64 5 chrUextra 3717695 3717898 -25286758 + DNAREP1_DM LINE Penelope 22 236 -358 7 613 21 57 0 0 chrUextra 3717939 3717974 -25286682 + AT_rich Low_complexity Low_complexity 1 35 0 7 613 221 208 38 0 chrUextra 3718688 3718741 -25285915 + (CATA)n Simple_repeat Simple_repeat 1 55 0 7 613 7594 18 42 0 chrUextra 3719138 3720086 -25284570 - DMRT1B LINE R1 -2146 3037 2050 7 613 1180 0 0 0 chrUextra 3720186 3720321 -25284335 + Copia_I LTR Copia 4459 4593 0 7 613 2148 18 7 0 chrUextra 3720321 3720595 -25284061 + Copia_LTR LTR Copia 1 276 0 7 613 1266 60 0 0 chrUextra 3720596 3720764 -25283892 - ROO_I LTR Pao -2657 5599 5432 7 613 2892 21 75 0 chrUextra 3720746 3721134 -25283522 - ROO_I LTR Pao -2970 5286 4870 7 613 3605 189 16 20 chrUextra 3721237 3722177 -25282479 + SAR_DM Satellite Satellite 282 1217 -255 7 613 900 49 16 0 chrUextra 3722283 3722405 -25282251 + DMCR1A LINE CR1 1522 1645 -2825 7 613 6569 14 2 13 chrUextra 3722405 3723230 -25281426 + PROTOP_A DNA P 1 816 -289 7 613 316 318 0 8 chrUextra 3723756 3723886 -25280770 - BLASTOPIA_I LTR Gypsy -775 3706 3578 7 613 2918 206 35 11 chrUextra 3724378 3725326 -25279330 - SAR_DM Satellite Satellite -506 971 1 7 613 3529 194 14 21 chrUextra 3725441 3726373 -25278283 + SAR_DM Satellite Satellite 332 1256 -216 7 613 4755 18 1 8 chrUextra 3726474 3727422 -25277234 - Copia_I LTR Copia -1699 2894 2054 7 613 3086 132 30 5 chrUextra 3727522 3728084 -25276572 - Stalker2_I LTR Gypsy -6585 817 242 7 613 291 49 0 0 chrUextra 3728282 3728323 -25276333 - Stalker2_I LTR Gypsy -7361 41 1 7 613 1182 20 0 7 chrUextra 3728323 3728470 -25276186 - Stalker3_LTR LTR Gypsy 0 372 227 7 613 3389 20 0 0 chrUextra 3728570 3728979 -25275677 - Gypsy4_I LTR Gypsy -5506 782 374 7 613 47 0 0 0 chrUextra 3729437 3729484 -25275172 + AT_rich Low_complexity Low_complexity 1 47 0 7 613 739 21 0 0 chrUextra 3729618 3729712 -25274944 - PROTOP_B DNA P -570 583 490 7 613 337 170 93 9 chrUextra 3730079 3730186 -25274470 + TAHRE LINE telomeric 7309 7424 -3039 7 613 645 214 6 54 chrUextra 3730190 3730358 -25274298 + HETA LINE telomeric 4152 4311 -1770 7 613 4867 56 55 8 chrUextra 3732760 3733707 -25270949 + PROTOP DNA P 7 863 -242 7 613 3325 206 16 19 chrUextra 3733807 3734741 -25269915 + SAR_DM Satellite Satellite 334 1264 -208 7 613 793 55 9 0 chrUextra 3734644 3734754 -25269902 - ARS406_DM Unknown Unknown -164 189 79 7 613 3777 22 22 15 chrUextra 3734854 3735141 -25269515 - DM176_I LTR Gypsy -5595 825 531 7 613 181 30 29 57 chrUextra 3735141 3735176 -25269480 + (TTA)n Simple_repeat Simple_repeat 3 36 0 7 613 3777 63 63 37 chrUextra 3735176 3735627 -25269029 - DM176_I LTR Gypsy -5890 530 1 7 613 467 128 142 74 chrUextra 3735627 3735801 -25268855 - DM176_LTR LTR Gypsy -27 480 230 7 613 260 56 0 0 chrUextra 3735901 3735937 -25268719 + HMSBEAGLE_I LTR Gypsy 2366 2401 -4128 7 613 1714 108 16 60 chrUextra 3735988 3736304 -25268352 - Gypsy6A_LTR LTR Gypsy -118 302 1 7 613 1477 198 105 0 chrUextra 3736365 3736709 -25267947 + HMSBEAGLE_I LTR Gypsy 2422 2801 -3728 7 613 670 221 0 0 chrUextra 3736708 3736848 -25267808 + HMSBEAGLE_I LTR Gypsy 3155 3294 -3235 7 613 7436 40 1 1 chrUextra 3736948 3737895 -25266761 + R1_DM LINE R1 972 1918 -3438 7 613 983 8 0 0 chrUextra 3737995 3738115 -25266541 - Copia_I LTR Copia -4473 120 1 7 613 2297 0 0 0 chrUextra 3738115 3738391 -25266265 - Copia_LTR LTR Copia 0 276 1 7 613 4680 11 5 0 chrUextra 3738391 3738942 -25265714 + QUASIMODO_I LTR Gypsy 1801 2354 -3706 7 613 646 39 0 0 chrUextra 3739042 3739145 -25265511 + FW_DM LINE Jockey 4590 4692 0 7 613 2229 107 35 25 chrUextra 3739146 3739989 -25264667 - DMSAT6 Satellite Satellite -105 851 1 7 613 316 265 0 0 chrUextra 3740321 3740419 -25264237 - DIVER2_I LTR Pao -1621 2526 2429 7 613 4354 14 0 69 chrUextra 3741136 3741727 -25262929 - QUASIMODO_I LTR Gypsy -5510 550 1 7 613 2837 3 3 17 chrUextra 3741727 3742083 -25262573 - QUASIMODO_LTR LTR Gypsy 0 658 308 7 613 2294 165 4 6 chrUextra 3742183 3742658 -25261998 + SAR_DM Satellite Satellite 430 903 -569 7 613 1928 193 2 5 chrUextra 3742673 3743116 -25261540 + SAR_DM Satellite Satellite 496 937 -535 7 613 989 51 0 0 chrUextra 3742993 3743130 -25261526 - ARS406_DM Unknown Unknown -164 189 53 7 613 25 48 0 46 chrUextra 3743696 3743761 -25260895 + AT_rich Low_complexity Low_complexity 1 62 0 7 613 824 307 75 13 chrUextra 3744623 3745154 -25259502 + Copia_I LTR Copia 1716 2279 -2314 7 613 2316 115 25 19 chrUextra 3745324 3746271 -25258385 + DMSAT6 Satellite Satellite 1 953 -228 7 613 519 90 0 196 chrUextra 3746446 3746584 -25258072 - DNAREP1_DM LINE Penelope -9 585 475 7 613 6804 18 37 1 chrUextra 3748465 3749309 -25255347 - DMRT1B LINE R1 -4309 874 1 7 613 7244 42 6 2 chrUextra 3749512 3750459 -25254197 - R1_DM LINE R1 -3780 1576 626 7 613 2615 22 0 0 chrUextra 3750559 3750872 -25253784 - CIRCE LINE Composite -6043 313 1 7 613 5075 24 36 0 chrUextra 3750872 3751506 -25253150 - CIRCE LINE Composite 0 6356 5700 7 613 3284 210 25 10 chrUextra 3751622 3752546 -25252110 + SAR_DM Satellite Satellite 332 1269 -203 7 613 3509 68 0 4 chrUextra 3753700 3754186 -25250470 + HOBO DNA hAT 467 950 -2066 7 613 533 64 13 0 chrUextra 3754187 3754265 -25250391 + HOBO DNA hAT 1100 1178 -1838 7 613 917 151 0 0 chrUextra 3754272 3754431 -25250225 + HOBO DNA hAT 1478 1636 -1380 7 613 423 203 39 71 chrUextra 3754439 3754593 -25250063 + HOBO DNA hAT 1753 1901 -1115 7 613 244 170 0 0 chrUextra 3754600 3754647 -25250009 + HOBO DNA hAT 2088 2134 -882 7 613 2897 129 12 16 chrUextra 3754747 3755258 -25249398 + TAHRE LINE telomeric 9945 10453 -10 7 613 3603 15 0 0 chrUextra 3755240 3755694 -25248962 + TAHRE LINE telomeric 2782 3235 -7228 7 613 1987 110 13 29 chrUextra 3755794 3756170 -25248486 + TAHRE LINE telomeric 10093 10462 -1 7 613 3369 73 6 20 chrUextra 3756153 3756741 -25247915 + HETA LINE telomeric 1 608 -5473 7 613 3637 190 24 19 chrUextra 3756841 3757787 -25246869 + SAR_DM Satellite Satellite 257 1207 -265 7 613 3114 80 2 11 chrUextra 3757887 3758331 -25246325 + R1_DM LINE R1 1666 2105 -3251 7 613 239 232 61 0 chrUextra 3758345 3758444 -25246212 + R1_DM LINE R1 606 710 -4646 7 613 2496 133 5 7 chrUextra 3758420 3758833 -25245823 + R1_DM LINE R1 1108 1498 -3858 7 613 1084 261 25 49 chrUextra 3758969 3759457 -25245199 + FROGGER_I LTR Copia 1562 2037 -40 7 613 623 205 97 0 chrUextra 3759694 3759879 -25244777 - SAR_DM Satellite Satellite -627 845 643 7 613 6082 101 48 9 chrUextra 3759979 3760925 -25243731 - Gypsy12_I LTR Gypsy -3320 2226 1245 7 613 5597 14 21 0 chrUextra 3761305 3761971 -25242685 - SSU-rRNA_Dme rRNA rRNA 0 1995 1316 7 613 938 167 63 10 chrUextra 3762071 3762343 -25242313 + ARS406_DM Unknown Unknown 22 360 0 7 613 3233 168 15 22 chrUextra 3762257 3763013 -25241643 - SAR_DM Satellite Satellite -354 1118 369 7 613 23 68 0 0 chrUextra 3763776 3763820 -25240836 + AT_rich Low_complexity Low_complexity 1 44 0 7 613 26 30 0 0 chrUextra 3763866 3763899 -25240757 + AT_rich Low_complexity Low_complexity 1 33 0 7 613 2433 106 22 4 chrUextra 3764166 3765108 -25239548 + DMSAT6 Satellite Satellite 1 959 -108 7 613 7845 4 12 0 chrUextra 3765209 3766155 -25238501 - DM176_I LTR Gypsy -1315 5105 4149 7 613 7655 20 24 1 chrUextra 3766255 3767201 -25237455 - R1_DM LINE R1 -1373 3983 3016 7 613 7285 44 11 1 chrUextra 3767301 3768247 -25236409 - R1_DM LINE R1 -3668 1688 734 7 613 3138 24 0 0 chrUextra 3768347 3768725 -25235931 + LSU-rRNA_Dme rRNA rRNA 3523 3900 0 7 613 2313 110 18 19 chrUextra 3768836 3769293 -25235363 + G2_DM LINE Jockey 4 305 -2797 7 613 7029 52 0 14 chrUextra 3769393 3770339 -25234317 + DMCR1A LINE CR1 2609 3541 -929 7 613 637 112 8 8 chrUextra 3771485 3771602 -25233054 - ARS406_DM Unknown Unknown -236 117 1 7 613 3901 170 12 22 chrUextra 3771509 3772431 -25232225 + SAR_DM Satellite Satellite 195 1107 -365 7 613 4091 47 109 41 chrUextra 3772531 3773475 -25231181 + BATUMI_I LTR Pao 2329 3336 -4627 7 613 3636 194 19 17 chrUextra 3773577 3774519 -25230137 + SAR_DM Satellite Satellite 287 1230 -242 7 613 1716 103 37 34 chrUextra 3774654 3774975 -25229681 - ROVER-LTR_DM LTR Gypsy 0 367 46 7 613 21 57 0 0 chrUextra 3775328 3775363 -25229293 + AT_rich Low_complexity Low_complexity 1 35 0 7 613 2679 182 7 7 chrUextra 3775669 3776615 -25228041 - SAR_DM Satellite Satellite -649 946 1 7 613 379 65 242 0 chrUextra 3776715 3776777 -25227879 - PROTOP_B DNA P -1076 77 1 7 613 3391 36 131 0 chrUextra 3777761 3778601 -25226055 + DOC3_DM LINE Jockey 3547 4496 -244 7 613 691 56 37 0 chrUextra 3778598 3778705 -25225951 + DOC3_DM LINE Jockey 4630 4740 0 7 613 2341 141 50 31 chrUextra 3778998 3779751 -25224905 + Stalker2_I LTR Gypsy 291 1173 -5357 7 613 800 33 7 160 chrUextra 3779852 3779996 -25224660 + DIVER2_I LTR Pao 1454 1575 -2572 7 613 3398 52 9 0 chrUextra 3779973 3780398 -25224258 + DIVER2_I LTR Pao 3719 4147 0 7 613 971 27 0 0 chrUextra 3780398 3780509 -25224147 + DIVER2_LTR LTR Pao 1 111 -274 7 613 1140 42 7 0 chrUextra 3780522 3780665 -25223991 + DIVER2_LTR LTR Pao 242 385 0 7 613 3474 26 106 4 chrUextra 3781014 3781842 -25222814 + BLOOD_I LTR Gypsy 32 944 -5669 7 613 470 281 129 29 chrUextra 3782248 3782817 -25221839 + Gypsy4_I LTR Gypsy 3237 3538 -2883 7 613 6643 54 6 45 chrUextra 3782999 3783932 -25220724 + HETA LINE telomeric 587 1483 -4598 7 613 7986 36 8 0 chrUextra 3784032 3784977 -25219679 - R1_DM LINE R1 -3247 2109 1157 7 613 2584 102 32 6 chrUextra 3785077 3786006 -25218650 + DMSAT6 Satellite Satellite 1 953 -29 7 613 3127 0 3 0 chrUextra 3786122 3786476 -25218180 - MICROPIA_I LTR Gypsy -239 4237 3883 7 613 5426 15 5 0 chrUextra 3786451 3787067 -25217589 - MICROPIA_I LTR Gypsy -1043 3433 2815 7 613 3779 186 20 25 chrUextra 3787170 3788098 -25216558 + SAR_DM Satellite Satellite 346 1269 -203 7 613 855 77 0 0 chrUextra 3787995 3788112 -25216544 - ARS406_DM Unknown Unknown -164 189 73 7 613 435 0 0 0 chrUextra 3788212 3788260 -25216396 + SSU-rRNA_Dme rRNA rRNA 1948 1995 0 7 613 21 89 0 0 chrUextra 3788279 3788335 -25216321 + AT_rich Low_complexity Low_complexity 1 56 0 7 613 245 231 0 19 chrUextra 3790093 3790146 -25214510 + Gypsy_I LTR Gypsy 2605 2656 -3851 7 613 929 346 28 55 chrUextra 3790320 3791247 -25213409 + MICROPIA_I LTR Gypsy 176 1077 -3399 7 613 6567 39 17 74 chrUextra 3791349 3792290 -25212366 + Gypsy6_I LTR Gypsy 1 887 -6125 7 613 1502 249 19 21 chrUextra 3792392 3792814 -25211842 + TOM_I LTR Gypsy 4896 5316 -796 7 613 3845 66 46 6 chrUextra 3792812 3793333 -25211323 + DMCR1A LINE CR1 3457 3998 -472 7 613 5972 13 4 4 chrUextra 3793437 3794146 -25210510 + PROTOP_A DNA P 397 1105 0 7 613 1298 124 0 28 chrUextra 3794146 3794360 -25210296 - TART LINE telomeric -10587 3890 3683 7 613 2731 187 25 6 chrUextra 3794484 3795124 -25209532 - SAR_DM Satellite Satellite -448 1024 373 7 613 790 170 22 4 chrUextra 3795147 3795427 -25209229 - SAR_DM Satellite Satellite -630 285 1 7 613 808 74 0 0 chrUextra 3795530 3795650 -25209006 + TART_B1 LINE telomeric 2286 2405 -8249 7 613 236 32 0 0 chrUextra 3795650 3795681 -25208975 + PROTOP_A DNA P 1 31 -1074 7 613 3184 19 0 38 chrUextra 3795679 3796072 -25208584 + PROTOP_A DNA P 728 1105 0 7 613 2729 91 35 5 chrUextra 3796072 3796469 -25208187 + TART_B1 LINE telomeric 2399 2807 -7847 7 613 1158 125 0 2 chrUextra 3796573 3797094 -25207562 + (TA)n Simple_repeat Simple_repeat 1 519 0 7 613 700 97 64 13 chrUextra 3798230 3798251 -25206405 + polypyrimidine Low_complexity Low_complexity 148 169 0 7 613 984 86 28 11 chrUextra 3798251 3798427 -25206229 + (TTCTC)n Simple_repeat Simple_repeat 1 179 0 7 613 700 97 64 13 chrUextra 3798427 3798562 -25206094 + CT-rich Low_complexity Low_complexity 5 147 0 7 613 3781 181 27 16 chrUextra 3798664 3799606 -25205050 + SAR_DM Satellite Satellite 1 951 -203 7 613 6831 104 0 1 chrUextra 3799708 3800650 -25204006 - GTWIN_I LTR Gypsy -1525 4896 3956 7 613 4235 15 130 0 chrUextra 3800750 3801026 -25203630 + TART LINE telomeric 7440 7722 -6755 7 76 549 55 0 0 chrUextra 3801026 3801099 -25203557 + (TAAAG)n Simple_repeat Simple_repeat 3 75 0 7 614 4235 15 130 0 chrUextra 3801099 3801351 -25203305 + TART LINE telomeric 7723 8035 -6442 7 614 2118 111 103 3 chrUextra 3801343 3801694 -25202962 + TART LINE telomeric 6742 7127 -7350 7 614 314 116 26 115 chrUextra 3802143 3802221 -25202435 + TIRANT_I LTR Gypsy 1 71 -7621 7 614 1642 158 17 23 chrUextra 3802853 3803152 -25201504 - Gypsy12_LTR LTR Gypsy -2039 297 1 7 614 4522 79 78 14 chrUextra 3803152 3803781 -25200875 - Gypsy12_I LTR Gypsy 0 5546 4878 7 614 2751 0 6 3 chrUextra 3803882 3804197 -25200459 + LSU-rRNA_Dme rRNA rRNA 1473 1788 -2112 7 614 4449 55 2 8 chrUextra 3804241 3804826 -25199830 + LSU-rRNA_Dme rRNA rRNA 1788 2368 -1532 7 614 24 32 0 0 chrUextra 3805312 3805343 -25199313 + AT_rich Low_complexity Low_complexity 1 31 0 7 614 8281 8 16 2 chrUextra 3805970 3806914 -25197742 + SSU-rRNA_Dme rRNA rRNA 459 1415 -580 7 614 6940 72 9 0 chrUextra 3807014 3807958 -25196698 - STALKER4_I LTR Gypsy -387 6143 5191 7 614 2771 9 6 9 chrUextra 3808058 3808388 -25196268 + DM297_LTR LTR Gypsy 86 414 0 7 614 5026 13 0 0 chrUextra 3808398 3809002 -25195654 + DM297_I LTR Gypsy 4276 4879 -1288 7 614 1587 38 0 2 chrUextra 3810173 3810672 -25193984 + (ATAAG)n Simple_repeat Simple_repeat 1 498 0 7 614 4927 197 0 6 chrUextra 3811191 3812127 -25192529 - ROVER-I_DM LTR Gypsy -3331 3253 2324 7 614 2895 200 39 16 chrUextra 3812234 3813178 -25191478 - SAR_DM Satellite Satellite -399 965 1 7 614 2474 97 0 11 chrUextra 3813278 3813642 -25191014 + HETA LINE telomeric 2664 3023 -3058 7 614 2283 112 315 7 chrUextra 3813662 3814221 -25190435 + TART LINE telomeric 9549 10279 -4198 7 614 3933 41 78 0 chrUextra 3814755 3815266 -25189390 + PROTOP DNA P 1 551 -3929 7 614 1852 263 27 41 chrUextra 3816412 3816521 -25188135 + SAR_DM Satellite Satellite 1 492 -766 7 614 2611 64 6 0 chrUextra 3816521 3816880 -25187776 - XDMR Unknown Unknown 0 361 1 7 614 2569 70 3 3 chrUextra 3816880 3817241 -25187415 - XDMR Unknown Unknown 0 361 1 7 614 1852 263 27 41 chrUextra 3817241 3817330 -25187326 + SAR_DM Satellite Satellite 493 905 -353 7 614 1597 6 0 0 chrUextra 3817454 3817631 -25187025 + DMRT1B LINE R1 5007 5183 0 7 614 647 210 76 10 chrUextra 3817678 3817875 -25186781 - Copia_I LTR Copia -932 3661 3452 7 614 806 28 0 0 chrUextra 3819087 3819194 -25185462 + TLD2 Unknown Unknown 112 218 0 7 614 377 297 32 32 chrUextra 3819122 3819341 -25185315 + DM176_I LTR Gypsy 3027 3245 -3175 7 614 38 61 0 0 chrUextra 3819928 3819994 -25184662 + AT_rich Low_complexity Low_complexity 1 66 0 7 614 422 128 139 13 chrUextra 3820005 3820084 -25184572 - DNAREP1_DM LINE Penelope -110 484 396 7 614 2373 98 10 8 chrUextra 3820084 3820485 -25184171 + S_DM DNA Tc1 91 492 -1244 7 614 21 36 0 0 chrUextra 3820905 3820933 -25183723 + AT_rich Low_complexity Low_complexity 1 28 0 7 614 35 0 0 0 chrUextra 3822196 3822231 -25182425 + AT_rich Low_complexity Low_complexity 1 35 0 7 614 1203 158 142 6 chrUextra 3822249 3822574 -25182082 - Gypsy5_I LTR Gypsy -1239 5270 4902 7 614 2929 31 42 0 chrUextra 3823265 3823618 -25181038 + PROTOP DNA P 1 368 -4112 7 614 704 65 0 0 chrUextra 3823718 3823811 -25180845 + TAHRE LINE telomeric 10361 10453 -10 7 614 3335 139 28 88 chrUextra 3823810 3824657 -25179999 + HETA LINE telomeric 190 985 -5096 7 614 318 219 77 77 chrUextra 3824789 3824893 -25179763 - MICROPIA_I LTR Gypsy -4372 104 1 7 614 260 344 31 20 chrUextra 3824920 3825116 -25179540 - ACCORD2_I LTR Gypsy -6457 755 558 7 614 3318 8 0 11 chrUextra 3825804 3826181 -25178475 + MICROPIA_I LTR Gypsy 3007 3379 -1097 7 614 4961 7 2 0 chrUextra 3826178 3826747 -25177909 + MICROPIA_I LTR Gypsy 3886 4455 -21 7 614 4261 0 0 0 chrUextra 3827890 3828373 -25176283 + DOC LINE Jockey 4243 4725 0 7 614 32 0 0 0 chrUextra 3828518 3828550 -25176106 + AT_rich Low_complexity Low_complexity 1 32 0 7 614 1341 13 0 0 chrUextra 3828682 3828833 -25175823 + SSU-rRNA_Dme rRNA rRNA 1 151 -1844 7 614 1973 0 9 21 chrUextra 3828936 3829169 -25175487 + DM1731_I LTR Copia 3747 3976 0 7 614 2788 39 0 0 chrUextra 3829169 3829505 -25175151 + DM1731_LTR LTR Copia 1 336 0 7 614 22 35 0 0 chrUextra 3829700 3829729 -25174927 + AT_rich Low_complexity Low_complexity 1 29 0 7 614 3820 172 18 37 chrUextra 3829988 3830876 -25173780 - SAR_DM Satellite Satellite -411 1061 191 7 614 654 171 8 0 chrUextra 3830788 3830917 -25173739 + ARS406_DM Unknown Unknown 10 139 -214 7 614 1512 38 0 3 chrUextra 3831019 3831365 -25173291 + (TATAA)n Simple_repeat Simple_repeat 1 344 0 7 614 2038 43 3 34 chrUextra 3831365 3831657 -25172999 + BATUMI_I LTR Pao 7002 7284 -679 7 614 1025 76 7 7 chrUextra 3831657 3831803 -25172853 + BATUMI_I LTR Pao 1 146 -7817 7 614 895 87 28 21 chrUextra 3831821 3831962 -25172694 + BATUMI_I LTR Pao 292 433 -7530 7 614 21 89 0 0 chrUextra 3832353 3832409 -25172247 + AT_rich Low_complexity Low_complexity 1 56 0 7 614 23 68 0 0 chrUextra 3832447 3832491 -25172165 + AT_rich Low_complexity Low_complexity 1 44 0 7 614 575 30 0 0 chrUextra 3832938 3833005 -25171651 - PROTOP_A DNA P -1 1104 1037 7 614 2487 181 57 12 chrUextra 3833105 3834047 -25170609 + SAR_DM Satellite Satellite 1 983 -208 7 614 7718 14 15 0 chrUextra 3834148 3835091 -25169565 + STALKER4_I LTR Gypsy 2113 3069 -3461 7 614 5509 22 46 0 chrUextra 3835193 3836134 -25168522 - FW_DM LINE Jockey -639 4053 3070 7 614 7222 18 30 12 chrUextra 3836234 3837177 -25167479 + ROO_I LTR Pao 2869 3828 -4428 7 614 7806 8 10 1 chrUextra 3837290 3838220 -25166436 + Invader3_I LTR Gypsy 1 938 -3950 7 614 7790 26 5 0 chrUextra 3838320 3839263 -25165393 - DIVER2_I LTR Pao -160 3987 3040 7 614 1923 175 95 69 chrUextra 3839364 3839973 -25164683 - HETA LINE telomeric -778 5303 4679 7 614 859 202 7 90 chrUextra 3840029 3840306 -25164350 - TAHRE LINE telomeric -3081 7382 7129 7 614 46 0 0 0 chrUextra 3840805 3840851 -25163805 + AT_rich Low_complexity Low_complexity 1 46 0 7 614 2545 131 11 15 chrUextra 3840885 3841341 -25163315 + DOC LINE Jockey 4147 4600 -125 7 614 592 273 29 0 chrUextra 3841449 3841621 -25163035 - HELENA_RT LINE Jockey -928 389 213 7 614 1731 312 6 0 chrUextra 3841652 3842316 -25162340 - BS LINE Jockey -3465 1661 994 7 614 4347 19 0 4 chrUextra 3842494 3843037 -25161619 - PROTOP_A DNA P -453 652 112 7 614 2134 88 18 2 chrUextra 3843032 3843420 -25161236 - TART LINE telomeric -6799 7678 7396 7 614 7489 16 43 6 chrUextra 3843537 3844474 -25160182 + FW_DM LINE Jockey 1842 2812 -1880 7 614 7918 8 1 0 chrUextra 3844578 3845521 -25159135 - DOC2_DM LINE Jockey -1107 3686 2743 7 614 1978 118 71 55 chrUextra 3845841 3846495 -25158161 - DNAREP1_DM LINE Penelope 0 594 24 7 614 3387 181 14 70 chrUextra 3846663 3847603 -25157053 - SAR_DM Satellite Satellite -443 888 1 7 614 302 148 3 0 chrUextra 3848069 3848126 -25156530 + HETA LINE telomeric 4170 4217 -1864 7 614 24 0 0 0 chrUextra 3848400 3848424 -25156232 + AT_rich Low_complexity Low_complexity 1 24 0 7 614 25 75 0 0 chrUextra 3848493 3848546 -25156110 + AT_rich Low_complexity Low_complexity 1 53 0 7 614 6092 23 117 0 chrUextra 3848747 3849689 -25154967 - R1_DM LINE R1 -1595 3761 2710 7 614 3758 183 15 19 chrUextra 3849789 3850731 -25153925 - SAR_DM Satellite Satellite -268 1204 267 7 614 2477 85 17 32 chrUextra 3850832 3851773 -25152883 + DMSAT6 Satellite Satellite 1 926 -48 7 614 3017 19 3 0 chrUextra 3851873 3852237 -25152419 + R1_DM LINE R1 4992 5356 0 7 614 4062 61 4 4 chrUextra 3852270 3852815 -25151841 + R1_DM LINE R1 1 545 -4811 7 614 732 106 0 8 chrUextra 3852915 3853039 -25151617 - ARS406_DM Unknown Unknown -230 123 1 7 614 3580 189 11 11 chrUextra 3852945 3853827 -25150829 + SAR_DM Satellite Satellite 195 1076 -396 7 614 3331 115 52 4 chrUextra 3854107 3854891 -25149765 + DMRT1C LINE R1 3743 4615 -828 7 614 1282 24 24 0 chrUextra 3854999 3855164 -25149492 - DM176_LTR LTR Gypsy -88 419 251 7 614 2208 7 0 78 chrUextra 3855165 3855472 -25149184 - DM176_LTR LTR Gypsy -224 283 1 7 614 216 0 0 0 chrUextra 3855473 3855497 -25149159 + (TA)n Simple_repeat Simple_repeat 1 24 0 7 614 3705 7 2 0 chrUextra 3855497 3855939 -25148717 - IDEFIX_LTR LTR Gypsy -1 593 151 7 614 1046 15 7 0 chrUextra 3856043 3856180 -25148476 + G_DM LINE Jockey 3483 3620 -726 7 614 246 150 0 0 chrUextra 3856255 3856295 -25148361 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 614 4857 16 18 3 chrUextra 3856368 3856983 -25147673 + G_DM LINE Jockey 1 624 -3722 7 614 3650 195 16 20 chrUextra 3857084 3858025 -25146631 + SAR_DM Satellite Satellite 1 937 -216 7 614 500 110 0 0 chrUextra 3858125 3858207 -25146449 - ARS406_DM Unknown Unknown -271 82 1 7 614 3344 205 7 17 chrUextra 3858160 3859049 -25145607 + SAR_DM Satellite Satellite 239 1118 -354 7 614 300 198 10 29 chrUextra 3858963 3859067 -25145589 - XDMR_DM Unknown Unknown 0 360 259 7 614 2127 110 146 7 chrUextra 3859179 3859591 -25145065 + Invader1_I LTR Gypsy 2718 3186 0 7 614 1490 129 17 38 chrUextra 3859591 3859882 -25144774 + Invader1_LTR LTR Gypsy 1 285 -138 7 614 4025 2 0 0 chrUextra 3860210 3860680 -25143976 + DM176_LTR LTR Gypsy 38 507 0 7 614 1566 20 2 0 chrUextra 3860686 3861146 -25143510 + (TTATA)n Simple_repeat Simple_repeat 1 461 0 7 614 26 0 0 0 chrUextra 3861601 3861627 -25143029 + AT_rich Low_complexity Low_complexity 1 26 0 7 614 1793 271 8 9 chrUextra 3862303 3862965 -25141691 - QUASIMODO_I LTR Gypsy -561 5499 4839 7 614 2050 187 57 22 chrUextra 3863345 3864190 -25140466 - TART LINE telomeric -731 9732 8525 7 614 724 42 0 0 chrUextra 3864181 3864277 -25140379 - G6_DM LINE Jockey 0 2042 1947 7 614 3590 193 11 16 chrUextra 3864377 3865293 -25139363 + SAR_DM Satellite Satellite 208 1118 -354 7 614 417 200 0 18 chrUextra 3865207 3865319 -25139337 - XDMR_DM Unknown Unknown 0 360 251 7 614 1879 79 4 0 chrUextra 3865420 3865685 -25138971 - Baggins1 LINE LOA -426 5027 4762 7 614 884 183 80 90 chrUextra 3865994 3866306 -25138350 - TIRANT_LTR LTR Gypsy -108 309 1 7 614 2821 12 0 0 chrUextra 3866461 3866798 -25137858 + DM176_LTR LTR Gypsy 171 507 0 7 614 3465 23 0 16 chrUextra 3866953 3867403 -25137253 + STALKER4_I LTR Gypsy 1064 1506 -5024 7 614 1089 94 0 0 chrUextra 3867503 3867652 -25137004 + Gypsy12_I LTR Gypsy 1673 1821 -3725 7 614 5052 83 93 26 chrUextra 3867649 3868445 -25136211 + Gypsy12_I LTR Gypsy 4465 5313 -233 7 614 1447 313 20 23 chrUextra 3868553 3869288 -25135368 - Copia2_I LTR Copia -2071 2091 1359 7 614 697 54 0 0 chrUextra 3869586 3869679 -25134977 + DOC3_DM LINE Jockey 759 851 -3889 7 614 1998 24 4 0 chrUextra 3869676 3869925 -25134731 + DOC3_DM LINE Jockey 1016 1265 -3475 7 614 4657 40 17 0 chrUextra 3869930 3870527 -25134129 + DOC3_DM LINE Jockey 1647 2253 -2487 7 614 6475 29 116 0 chrUextra 3870627 3871568 -25133088 + MAX_I LTR Pao 4075 5124 -2790 7 614 1623 101 108 25 chrUextra 3872709 3873023 -25131633 - BATUMI_I LTR Pao -7623 340 1 7 614 1993 35 3 34 chrUextra 3873023 3873315 -25131341 - BATUMI_I LTR Pao -679 7284 7002 7 614 551 0 130 6 chrUextra 3873315 3873640 -25131016 + (TA)n Simple_repeat Simple_repeat 1 365 0 7 614 2396 164 10 5 chrUextra 3873750 3874688 -25129968 + SAR_DM Satellite Satellite 1 942 -588 7 614 3967 17 90 3 chrUextra 3874791 3875477 -25129179 - R1_DM LINE R1 -1416 3940 3195 7 614 2091 19 0 0 chrUextra 3875475 3875732 -25128924 - R1_DM LINE R1 -2484 2872 2616 7 614 345 91 0 0 chrUextra 3876077 3876132 -25128524 + PROTOP_A DNA P 219 273 -832 7 614 4395 13 30 0 chrUextra 3876183 3876380 -25128276 - QUASIMODO_I LTR Gypsy -5513 547 351 7 614 218 56 0 27 chrUextra 3876380 3876417 -25128239 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 7 614 4395 13 30 0 chrUextra 3876417 3876750 -25127906 - QUASIMODO_I LTR Gypsy -5710 350 2 7 614 634 106 71 12 chrUextra 3876873 3877173 -25127483 + CT-rich Low_complexity Low_complexity 1 317 0 7 614 625 90 0 0 chrUextra 3878985 3879074 -25125582 - ACCORD2_I LTR Gypsy -4448 2764 2676 7 614 3149 84 14 10 chrUextra 3879075 3879569 -25125087 - ACCORD2_I LTR Gypsy -4843 2369 1874 7 614 219 69 0 0 chrUextra 3879569 3879598 -25125058 + (TA)n Simple_repeat Simple_repeat 2 30 0 7 614 2524 104 65 14 chrUextra 3880286 3880732 -25123924 + Invader1_I LTR Gypsy 2718 3186 0 7 614 1034 88 88 54 chrUextra 3880732 3880937 -25123719 + Invader1_LTR LTR Gypsy 1 212 -211 7 614 2670 179 14 9 chrUextra 3881037 3881970 -25122686 + SAR_DM Satellite Satellite 1 937 -1005 7 614 2509 176 61 33 chrUextra 3882078 3882626 -25122030 + TART_B1 LINE telomeric 1634 2357 -8297 7 614 1981 21 0 0 chrUextra 3882626 3882859 -25121797 + PROTOP_A DNA P 873 1105 0 7 614 2509 176 61 33 chrUextra 3882859 3883019 -25121637 + TART_B1 LINE telomeric 2358 2571 -8083 7 614 7393 37 24 0 chrUextra 3883119 3884060 -25120596 - MAX_I LTR Pao -2464 5450 4487 7 614 2743 78 71 2 chrUextra 3884160 3884595 -25120061 + TRANSIB2 DNA Transib 2315 2779 -65 7 614 3466 105 0 0 chrUextra 3884596 3885101 -25119555 - DMRT1B LINE R1 -1372 3811 3307 7 614 1811 18 0 5 chrUextra 3885201 3885419 -25119237 + R1_DM LINE R1 5140 5356 0 7 614 4386 60 3 3 chrUextra 3885453 3886041 -25118615 + R1_DM LINE R1 24 611 -4745 7 614 679 63 0 0 chrUextra 3886043 3886138 -25118518 + R1_DM LINE R1 1157 1251 -4105 7 614 5803 4 19 1 chrUextra 3886243 3886965 -25117691 + Invader3_I LTR Gypsy 4154 4888 0 7 614 1718 23 55 0 chrUextra 3886965 3887183 -25117473 + Invader3_LTR LTR Gypsy 1 230 -68 7 614 3501 193 19 22 chrUextra 3887284 3888200 -25116456 + SAR_DM Satellite Satellite 246 1158 -314 7 614 435 214 14 21 chrUextra 3888078 3888221 -25116435 - XDMR_DM Unknown Unknown 0 360 219 7 614 2370 132 24 32 chrUextra 3888324 3889264 -25115392 - DMSAT6 Satellite Satellite -79 932 1 7 614 3830 185 36 21 chrUextra 3889367 3890306 -25114350 + SAR_DM Satellite Satellite 259 1211 -261 7 614 3503 37 34 0 chrUextra 3890406 3890842 -25113814 - DMCR1A LINE CR1 -1738 2732 2282 7 614 468 93 0 0 chrUextra 3891041 3891116 -25113540 - TLD2 Unknown Unknown 0 218 144 7 614 30 27 0 0 chrUextra 3891550 3891587 -25113069 + AT_rich Low_complexity Low_complexity 1 37 0 7 614 1530 98 43 4 chrUextra 3891839 3892074 -25112582 + BS2 LINE Jockey 14 257 -4464 7 614 1918 40 12 8 chrUextra 3892073 3892327 -25112329 - G5_DM LINE Jockey 0 4856 4602 7 614 388 31 328 0 chrUextra 3892324 3892388 -25112268 - G5_DM LINE Jockey -489 4367 4283 7 614 3092 193 67 28 chrUextra 3892489 3893427 -25111229 + SAR_DM Satellite Satellite 1 973 -203 7 614 4001 184 13 21 chrUextra 3893529 3894462 -25110194 + SAR_DM Satellite Satellite 267 1191 -281 7 614 265 31 0 0 chrUextra 3894438 3894470 -25110186 - ARS406_DM Unknown Unknown -164 189 158 7 614 2640 176 13 9 chrUextra 3894699 3895488 -25109168 - SAR_DM Satellite Satellite -478 791 1 7 614 4664 22 13 0 chrUextra 3895610 3896165 -25108491 + NINJA_I LTR Pao 414 975 -5036 7 614 3184 23 5 0 chrUextra 3896161 3896550 -25108106 + NINJA_I LTR Pao 1705 2095 -3916 7 614 186 43 0 0 chrUextra 3896815 3896838 -25107818 + (TTTTTA)n Simple_repeat Simple_repeat 1 23 0 7 614 270 208 0 0 chrUextra 3897537 3897590 -25107066 + TOM_I LTR Gypsy 2196 2248 -3864 7 614 1379 102 5 5 chrUextra 3897695 3897901 -25106755 + BS2 LINE Jockey 52 257 -4464 7 614 1918 40 12 8 chrUextra 3897900 3898154 -25106502 - G5_DM LINE Jockey 0 4856 4602 7 614 2841 59 59 0 chrUextra 3898151 3898525 -25106131 - G5_DM LINE Jockey -489 4367 3972 7 614 21 0 0 0 chrUextra 3898556 3898577 -25106079 + AT_rich Low_complexity Low_complexity 1 21 0 7 614 3803 171 107 15 chrUextra 3899774 3900710 -25103946 - HETA LINE telomeric -586 5495 4474 7 614 3357 212 32 24 chrUextra 3900811 3901749 -25102907 - SAR_DM Satellite Satellite -281 1191 246 7 614 3662 192 21 28 chrUextra 3902890 3903823 -25100833 + SAR_DM Satellite Satellite 304 1230 -242 7 614 1537 327 8 10 chrUextra 3904257 3904869 -25099787 + HMSBEAGLE_I LTR Gypsy 1440 2050 -4479 7 614 576 90 0 22 chrUextra 3904970 3905061 -25099595 + RSP Satellite Satellite 17 105 -13 7 614 7295 21 0 8 chrUextra 3905065 3905910 -25098746 - G5_DM LINE Jockey 0 4856 4019 7 614 2962 6 9 0 chrUextra 3906013 3906360 -25098296 + IDEFIX_LTR LTR Gypsy 245 594 0 7 614 740 11 11 0 chrUextra 3907050 3907142 -25097514 + IVK_DM LINE I 5309 5401 -1 7 614 5935 36 33 1 chrUextra 3907259 3907990 -25096666 - DMCR1A LINE CR1 0 4470 3717 7 614 1609 0 5 5 chrUextra 3908090 3908278 -25096378 - Copia2_LTR_DM LTR Copia -10 188 1 7 614 1841 35 8 38 chrUextra 3908278 3908544 -25096112 - Copia2_I LTR Copia 0 4162 3905 7 614 4308 16 6 0 chrUextra 3908536 3909030 -25095626 - Copia2_I LTR Copia -1572 2590 2094 7 614 4575 8 0 17 chrUextra 3909130 3909657 -25094999 - DOC LINE Jockey -4176 549 32 7 614 21 89 0 0 chrUextra 3910176 3910232 -25094424 + AT_rich Low_complexity Low_complexity 1 56 0 7 614 29 70 0 0 chrUextra 3910270 3910327 -25094329 + AT_rich Low_complexity Low_complexity 1 57 0 7 614 26 30 0 0 chrUextra 3910367 3910400 -25094256 + AT_rich Low_complexity Low_complexity 1 33 0 7 614 3459 56 69 0 chrUextra 3910562 3911041 -25093615 - PROTOP DNA P -3968 512 1 7 614 2315 178 29 14 chrUextra 3911215 3911741 -25092915 - SAR_DM Satellite Satellite -1109 533 1 7 614 1488 172 32 9 chrUextra 3911752 3912092 -25092564 - SAR_DM Satellite Satellite -396 1076 729 7 614 795 11 0 31 chrUextra 3912250 3912348 -25092308 - NTS_DM Other Other -121 119 25 7 614 22 56 0 0 chrUextra 3912374 3912410 -25092246 + AT_rich Low_complexity Low_complexity 1 36 0 7 614 269 125 0 0 chrUextra 3912423 3912463 -25092193 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 614 3365 0 0 0 chrUextra 3912524 3912889 -25091767 - R2_DM LINE R2 -1322 2285 1921 7 614 2775 0 0 0 chrUextra 3912886 3913189 -25091467 - LSU-rRNA_Dme rRNA rRNA -1274 2626 2324 7 614 3757 195 21 15 chrUextra 3913302 3914230 -25090426 - SAR_DM Satellite Satellite -435 933 1 7 614 6639 11 0 96 chrUextra 3914330 3915270 -25089386 - MDG3_I LTR Gypsy -2920 2066 1217 7 614 1258 287 38 38 chrUextra 3915415 3916222 -25088434 + ZAM_I LTR Gypsy 4717 5523 -1967 7 614 4024 185 16 19 chrUextra 3916410 3917348 -25087308 - SAR_DM Satellite Satellite -308 1164 230 7 614 7240 47 64 5 chrUextra 3917448 3918387 -25086269 + BATUMI_I LTR Pao 4428 5421 -2542 7 614 5635 5 0 0 chrUextra 3918487 3919109 -25085547 + DMRT1B LINE R1 4562 5183 0 7 614 242 114 0 0 chrUextra 3919290 3919325 -25085331 - Invader1_I LTR Gypsy 0 3186 3152 7 614 7487 21 95 1 chrUextra 3920565 3921504 -25083152 - R1_DM LINE R1 -2207 3149 2123 7 614 1596 135 57 57 chrUextra 3921626 3922050 -25082606 + BATUMI_I LTR Pao 292 715 -7248 7 614 4064 27 4 4 chrUextra 3922055 3922537 -25082119 + Gypsy_LTR LTR Gypsy 1 482 0 7 614 4779 16 9 0 chrUextra 3922643 3923216 -25081440 + QUASIMODO_I LTR Gypsy 972 1549 -4511 7 614 3197 8 0 0 chrUextra 3923216 3923582 -25081074 + QUASIMODO_I LTR Gypsy 1883 2248 -3812 7 614 2549 106 12 31 chrUextra 3924721 3925658 -25078998 + DMSAT6 Satellite Satellite 1 918 -69 7 614 3887 194 14 19 chrUextra 3925762 3926699 -25077957 - SAR_DM Satellite Satellite -291 1181 250 7 614 1693 121 151 36 chrUextra 3926799 3927467 -25077189 - Gypsy12_I LTR Gypsy -4746 800 1 7 614 1638 103 4 52 chrUextra 3927467 3927734 -25076922 - Gypsy12_LTR LTR Gypsy 0 2336 2083 7 614 8133 12 24 1 chrUextra 3927839 3928777 -25075879 + R2_DM LINE R2 381 1339 -2268 7 614 7913 38 0 0 chrUextra 3928877 3929816 -25074840 - MAX_I LTR Pao -5206 2708 1770 7 614 3945 7 2 2 chrUextra 3929916 3930371 -25074285 - ACCORD_I LTR Gypsy -5833 455 1 7 614 4309 0 33 0 chrUextra 3930371 3930855 -25073801 - ACCORD_LTR LTR Gypsy 0 558 59 7 614 3399 194 32 11 chrUextra 3930955 3931894 -25072762 + SAR_DM Satellite Satellite 1 959 -244 7 76 5029 21 2 0 chrUextra 3931994 3932575 -25072081 + R1_DM LINE R1 4775 5356 0 7 615 2450 62 6 6 chrUextra 3932608 3932933 -25071723 + R1_DM LINE R1 1 325 -5031 7 615 240 184 39 13 chrUextra 3933035 3933112 -25071544 + MDG1_LTR LTR Gypsy 334 412 -30 7 615 2982 125 35 3 chrUextra 3933113 3933972 -25070684 + BS3_DM LINE Jockey 1 766 -1024 7 615 8014 6 44 1 chrUextra 3934072 3935011 -25069645 - DMRT1B LINE R1 -3666 1517 539 7 615 323 67 0 0 chrUextra 3935111 3935156 -25069500 - ARS406_DM Unknown Unknown -308 45 1 7 615 3858 180 18 25 chrUextra 3935116 3936049 -25068607 + SAR_DM Satellite Satellite 246 1172 -300 7 615 3719 189 13 21 chrUextra 3936150 3937089 -25067567 - SAR_DM Satellite Satellite -450 931 1 7 615 744 285 12 12 chrUextra 3937203 3937523 -25067133 + Copia_I LTR Copia 1960 2279 -2314 7 615 418 197 0 0 chrUextra 3937795 3937866 -25066790 + HETA LINE telomeric 4533 4603 -1478 7 615 6513 38 0 8 chrUextra 3938229 3939017 -25065639 - DOC3_DM LINE Jockey -743 3997 3216 7 615 978 33 419 0 chrUextra 3939017 3939165 -25065491 - PROTOP_A DNA P 0 1105 896 7 615 5904 17 1 4 chrUextra 3939265 3939967 -25064689 + PROTOP_A DNA P 406 1105 0 7 615 1763 47 0 0 chrUextra 3939970 3940203 -25064453 - PROTOP_A DNA P -688 417 185 7 615 355 0 0 23 chrUextra 3940303 3940347 -25064309 - DOC2_DM LINE Jockey -4744 49 7 7 615 3543 187 16 30 chrUextra 3940356 3941234 -25063422 + SAR_DM Satellite Satellite 380 1245 -227 7 615 1425 29 0 0 chrUextra 3941342 3941516 -25063140 + (TTATA)n Simple_repeat Simple_repeat 2 175 0 7 615 1499 28 0 19 chrUextra 3941537 3941899 -25062757 + (TTATA)n Simple_repeat Simple_repeat 1 355 0 7 615 1346 70 14 22 chrUextra 3941921 3942274 -25062382 + (TTATA)n Simple_repeat Simple_repeat 1 350 0 7 615 7071 53 4 8 chrUextra 3943417 3944355 -25060301 - IDEFIX_I LTR Gypsy -1946 3682 2748 7 615 1751 294 48 28 chrUextra 3944457 3945372 -25059284 + Copia2_I LTR Copia 977 1909 -2253 7 615 3299 204 10 15 chrUextra 3945493 3946430 -25058226 + SAR_DM Satellite Satellite 1 932 -216 7 615 851 36 0 0 chrUextra 3946531 3946642 -25058014 + ARS406_DM Unknown Unknown 79 189 -164 7 615 3361 203 14 20 chrUextra 3946551 3947467 -25057189 - SAR_DM Satellite Satellite -216 1256 346 7 615 7269 43 1 0 chrUextra 3947569 3948507 -25056149 + G2_DM LINE Jockey 1534 2472 -630 7 615 2393 194 16 21 chrUextra 3949651 3950583 -25054073 - SAR_DM Satellite Satellite -569 927 1 7 615 3753 2 0 2 chrUextra 3950683 3951142 -25053514 + STALKER4_I LTR Gypsy 3112 3569 -2961 7 615 4044 13 0 0 chrUextra 3951142 3951620 -25053036 + PROTOP_A DNA P 1 478 -627 7 615 7119 31 25 5 chrUextra 3951720 3952656 -25052000 - LSU-rRNA_Dme rRNA rRNA -2195 1705 752 7 615 2389 105 32 12 chrUextra 3952759 3953694 -25050962 - DMSAT6 Satellite Satellite -28 953 1 7 615 398 23 0 142 chrUextra 3953794 3954191 -25050465 + GA-rich Low_complexity Low_complexity 1 340 0 7 615 1076 81 0 24 chrUextra 3954831 3954995 -25049661 + DMCR1A LINE CR1 2038 2197 -2273 7 615 401 53 0 0 chrUextra 3954996 3955053 -25049603 + DMCR1A LINE CR1 2385 2441 -2029 7 615 3957 48 36 0 chrUextra 3955072 3955595 -25049061 + DMCR1A LINE CR1 2523 3064 -1406 7 615 813 65 70 35 chrUextra 3955597 3955740 -25048916 + DMCR1A LINE CR1 3434 3581 -889 7 615 252 77 0 0 chrUextra 3955727 3955766 -25048890 + DMCR1A LINE CR1 3702 3740 -730 7 615 495 25 0 12 chrUextra 3955868 3955948 -25048708 + IDEFIX_LTR LTR Gypsy 516 594 0 7 615 703 80 0 94 chrUextra 3955954 3956092 -25048564 - MDG1_I LTR Gypsy -5818 778 654 7 615 576 114 8 47 chrUextra 3956217 3956346 -25048310 - MDG1_I LTR Gypsy -6012 584 461 7 615 681 111 200 0 chrUextra 3956340 3956475 -25048181 - MDG1_I LTR Gypsy -6363 233 72 7 615 414 103 0 143 chrUextra 3956526 3956617 -25048039 - MDG1_I LTR Gypsy -6518 78 1 7 615 1858 179 9 7 chrUextra 3956905 3957327 -25047329 - SAR_DM Satellite Satellite -724 748 326 7 615 2231 164 18 10 chrUextra 3957349 3957842 -25046814 - SAR_DM Satellite Satellite -569 903 407 7 615 6378 73 35 0 chrUextra 3957942 3958874 -25045782 - TART LINE telomeric -13315 1162 198 7 615 3340 199 24 16 chrUextra 3958979 3959916 -25044740 + SAR_DM Satellite Satellite 1 944 -220 7 615 3418 176 39 29 chrUextra 3960016 3960953 -25043703 - SAR_DM Satellite Satellite -442 946 1 7 615 3506 188 29 24 chrUextra 3961053 3961985 -25042671 + SAR_DM Satellite Satellite 294 1230 -242 7 615 2021 19 0 0 chrUextra 3962090 3962361 -25042295 - DM297_I LTR Gypsy -285 5882 5612 7 615 5612 9 0 0 chrUextra 3962346 3963027 -25041629 - DM297_I LTR Gypsy -1660 4507 3827 7 615 7778 21 1 1 chrUextra 3963127 3964064 -25040592 - G5_DM LINE Jockey -295 4561 3625 7 615 763 61 0 0 chrUextra 3964164 3964278 -25040378 - IDEFIX_I LTR Gypsy -1006 4622 4509 7 615 5973 56 16 0 chrUextra 3964268 3965101 -25039555 - IDEFIX_I LTR Gypsy -1346 4282 3437 7 615 766 0 0 11 chrUextra 3965201 3965294 -25039362 + MDG3_I LTR Gypsy 4895 4986 0 7 615 2257 11 0 0 chrUextra 3965294 3965561 -25039095 + MDG3_LTR LTR Gypsy 1 267 0 7 615 679 292 7 10 chrUextra 3965574 3965875 -25038781 + ROVER-I_DM LTR Gypsy 1352 1651 -4933 7 615 543 215 0 8 chrUextra 3965884 3966015 -25038641 + ROVER-I_DM LTR Gypsy 1805 1934 -4650 7 615 2150 15 0 0 chrUextra 3966238 3966497 -25038159 - DM176_LTR LTR Gypsy -248 259 1 7 615 1226 24 0 46 chrUextra 3966497 3966650 -25038006 + STALKER4_LTR LTR Gypsy 258 402 0 7 615 330 25 0 0 chrUextra 3966650 3966677 -25037979 + STALKER4_I LTR Gypsy 1 27 -6503 7 615 289 96 0 37 chrUextra 3966677 3966731 -25037925 + Stalker2_I LTR Gypsy 1 52 -7350 7 615 1267 163 82 0 chrUextra 3966905 3967175 -25037481 + Stalker2_I LTR Gypsy 252 543 -6859 7 615 1875 181 17 19 chrUextra 3967278 3967752 -25036904 + SAR_DM Satellite Satellite 293 765 -707 7 615 2705 33 0 0 chrUextra 3967751 3968087 -25036569 + DM1731_LTR LTR Copia 1 336 0 7 615 1049 8 8 0 chrUextra 3968087 3968212 -25036444 + DM1731_I LTR Copia 1 126 -3850 7 615 2247 111 23 29 chrUextra 3968333 3969249 -25035407 + DMSAT6 Satellite Satellite 1 910 0 7 615 4577 6 0 0 chrUextra 3969349 3969885 -25034771 - Copia2_I LTR Copia -3610 552 17 7 615 3366 8 0 2 chrUextra 3969885 3970286 -25034370 - Gypsy5_LTR LTR Gypsy 0 430 31 7 615 3402 187 15 16 chrUextra 3970387 3971322 -25033334 + SAR_DM Satellite Satellite 1 933 -208 7 615 758 330 49 31 chrUextra 3971422 3972345 -25032311 + Copia2_I LTR Copia 1823 2761 -1401 7 615 3753 184 15 22 chrUextra 3972458 3973386 -25031270 + SAR_DM Satellite Satellite 251 1172 -300 7 615 3752 8 42 2 chrUextra 3973494 3973965 -25030691 + IDEFIX_LTR LTR Gypsy 105 594 0 7 615 212 0 0 35 chrUextra 3974099 3974128 -25030528 + (TTA)n Simple_repeat Simple_repeat 2 29 0 7 615 1040 148 64 5 chrUextra 3974158 3974361 -25030295 - DNAREP1_DM LINE Penelope -358 236 22 7 615 7209 4 0 6 chrUextra 3974530 3975372 -25029284 - LSU-rRNA_Dme rRNA rRNA -1276 2624 1788 7 615 391 0 0 20 chrUextra 3975416 3975466 -25029190 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1740 7 615 2501 0 0 7 chrUextra 3975566 3975855 -25028801 - BLOOD_LTR LTR Gypsy -112 287 1 7 615 5620 0 0 0 chrUextra 3975855 3976502 -25028154 - DOC LINE Jockey -2252 2473 1827 7 615 3692 200 12 19 chrUextra 3976606 3977535 -25027121 - SAR_DM Satellite Satellite -396 922 1 7 615 6254 66 133 2 chrUextra 3977638 3978574 -25026082 - TART_B1 LINE telomeric -7172 3482 2424 7 615 236 273 41 48 chrUextra 3979730 3979876 -25024780 + Gypsy9_I LTR Gypsy 2642 2786 -1891 7 615 3258 212 7 19 chrUextra 3980746 3981672 -25022984 + SAR_DM Satellite Satellite 206 1119 -353 7 615 354 191 0 21 chrUextra 3981586 3981682 -25022974 - XDMR_DM Unknown Unknown 0 360 267 7 615 3714 189 19 20 chrUextra 3981783 3982718 -25021938 + SAR_DM Satellite Satellite 224 1157 -315 7 615 7548 31 0 0 chrUextra 3982818 3983754 -25020902 + NINJA_I LTR Pao 1607 2542 -3469 7 615 2657 168 14 7 chrUextra 3983855 3984790 -25019866 + SAR_DM Satellite Satellite 1 942 -558 7 615 3182 178 35 18 chrUextra 3984890 3985826 -25018830 - SAR_DM Satellite Satellite -430 951 1 7 615 3370 187 20 25 chrUextra 3985926 3986814 -25017842 + SAR_DM Satellite Satellite 373 1256 -216 7 615 1009 50 0 0 chrUextra 3986723 3986862 -25017794 - ARS406_DM Unknown Unknown -164 189 51 7 615 315 113 0 0 chrUextra 3986962 3987024 -25017632 + MDG1_I LTR Gypsy 6143 6204 -392 7 615 437 110 46 33 chrUextra 3987017 3987168 -25017488 + MDG1_I LTR Gypsy 6395 6547 -49 7 615 341 60 0 113 chrUextra 3987177 3987272 -25017384 + MDG1_I LTR Gypsy 6530 6596 0 7 615 1587 25 0 8 chrUextra 3987276 3987637 -25017019 + (TAA)n Simple_repeat Simple_repeat 1 358 0 7 615 1165 152 100 12 chrUextra 3987639 3987898 -25016758 + MDG1_LTR LTR Gypsy 89 370 -72 7 615 7530 21 26 0 chrUextra 3987998 3988934 -25015722 - R1_DM LINE R1 -2030 3326 2367 7 615 7211 24 41 16 chrUextra 3989034 3989970 -25014686 - CIRCE LINE Composite -2790 3566 2608 7 615 1789 0 0 0 chrUextra 3990070 3990280 -25014376 + Copia_I LTR Copia 4384 4593 0 7 615 2260 0 4 0 chrUextra 3990280 3990555 -25014101 + Copia_LTR LTR Copia 1 276 0 7 615 423 184 354 0 chrUextra 3990629 3990787 -25013869 + PROTOP_B DNA P 940 1153 0 7 615 233 132 0 0 chrUextra 3990787 3990825 -25013831 + PROTOP_B DNA P 1116 1153 0 7 615 2623 52 0 0 chrUextra 3991118 3991466 -25013190 + G2_DM LINE Jockey 2680 3027 -75 7 615 4743 30 0 0 chrUextra 3991465 3992042 -25012614 - G2_DM LINE Jockey -1645 1457 881 7 615 7121 43 8 14 chrUextra 3992142 3993078 -25011578 - BATUMI_I LTR Pao -3692 4271 3341 7 615 7720 19 2 0 chrUextra 3993178 3994114 -25010542 + STALKER4_I LTR Gypsy 4069 5006 -1524 7 615 7924 3 3 0 chrUextra 3994214 3995150 -25009506 + G6_DM LINE Jockey 301 1239 -803 7 615 2372 99 17 30 chrUextra 3995250 3996186 -25008470 + DMSAT6 Satellite Satellite 1 924 -69 7 615 1966 205 191 51 chrUextra 3996287 3997222 -25007434 + TAHRE LINE telomeric 9358 10423 -40 7 615 2313 103 93 0 chrUextra 3997322 3997710 -25006946 + DM176_I LTR Gypsy 2863 3286 -3134 7 615 1327 121 5 14 chrUextra 3997702 3997920 -25006736 + DM176_I LTR Gypsy 3453 3668 -2752 7 615 8007 97 30 2 chrUextra 3997929 3999292 -25005364 - DMRT1B LINE R1 -581 4602 3137 7 615 2421 197 8 7 chrUextra 3999392 3999999 -25004657 - SAR_DM Satellite Satellite -685 787 180 7 615 1672 169 3 3 chrUextra 4000001 4000327 -25004329 - SAR_DM Satellite Satellite -577 895 570 7 615 253 191 58 14 chrUextra 4001182 4001251 -25003405 + DM176_LTR LTR Gypsy 295 366 -141 7 615 456 151 54 0 chrUextra 4001268 4001361 -25003295 + DMTOM1_LTR LTR Gypsy 284 381 -29 7 615 3069 17 0 0 chrUextra 4001462 4001811 -25002845 - TAHRE LINE telomeric -7753 2710 2362 7 615 4458 36 85 10 chrUextra 4001811 4002397 -25002259 - TAHRE LINE telomeric -8422 2041 1412 7 615 3787 203 10 20 chrUextra 4002497 4003421 -25001235 + SAR_DM Satellite Satellite 1 915 -242 7 615 1945 0 18 0 chrUextra 4003539 4003758 -25000898 - DMRT1B LINE R1 -66 5117 4895 7 615 2271 28 17 10 chrUextra 4003755 4004047 -25000609 - DMRT1B LINE R1 -1868 3315 3022 7 615 357 155 93 46 chrUextra 4004682 4004790 -24999866 - TART_B1 LINE telomeric -132 10522 10410 7 615 1304 135 110 4 chrUextra 4004790 4005035 -24999621 - TART LINE telomeric -481 13996 13726 7 615 1497 199 161 35 chrUextra 4005047 4005475 -24999181 - TART LINE telomeric -1139 13338 12857 7 615 3230 8 0 0 chrUextra 4005602 4005963 -24998693 - MDG3_I LTR Gypsy -4625 361 1 7 615 2163 30 8 0 chrUextra 4005962 4006227 -24998429 - MDG3_LTR LTR Gypsy 0 267 1 7 615 1865 21 16 5 chrUextra 4006227 4006536 -24998120 - MDG3_I LTR Gypsy 0 4986 4608 7 615 3985 5 0 2 chrUextra 4006637 4007081 -24997575 + QUASIMODO_LTR LTR Gypsy 216 658 0 7 615 3526 42 108 0 chrUextra 4007092 4007572 -24997084 + IDEFIX_I LTR Gypsy 4442 4973 -655 7 615 2730 3 0 12 chrUextra 4007672 4007993 -24996663 - DOC LINE Jockey -4407 318 2 7 615 5467 11 2 0 chrUextra 4007991 4008607 -24996049 - MDG3_I LTR Gypsy -3399 1587 971 7 615 485 235 53 83 chrUextra 4008789 4009054 -24995602 + Gypsy3_LTR LTR Gypsy 112 368 -30 7 615 1867 128 100 52 chrUextra 4009140 4009642 -24995014 + ACCORD2_I LTR Gypsy 1507 2032 -5180 7 615 4061 190 13 21 chrUextra 4009747 4010677 -24993979 + SAR_DM Satellite Satellite 1 922 -203 7 615 1620 29 0 2 chrUextra 4010777 4011223 -24993433 + (TATAA)n Simple_repeat Simple_repeat 1 445 0 7 615 2389 0 0 0 chrUextra 4011226 4011502 -24993154 - Copia_LTR LTR Copia 0 276 1 7 615 1824 0 0 0 chrUextra 4011502 4011708 -24992948 - Copia_I LTR Copia 0 4593 4388 7 615 1235 0 7 0 chrUextra 4011812 4011951 -24992705 - DM1731_I LTR Copia -3836 140 1 7 615 2788 39 0 0 chrUextra 4011951 4012287 -24992369 - DM1731_LTR LTR Copia 0 336 1 7 615 1599 182 15 7 chrUextra 4012290 4012744 -24991912 + SAR_DM Satellite Satellite 1 457 -645 7 615 1234 123 133 79 chrUextra 4012847 4013270 -24991386 - IDEFIX_LTR LTR Gypsy -99 495 1 7 615 262 122 0 0 chrUextra 4013239 4013280 -24991376 + BARI1 DNA Tc1 4 44 -1706 7 615 207 113 48 0 chrUextra 4013283 4013345 -24991311 + (TA)n Simple_repeat Simple_repeat 2 66 0 7 615 1099 271 61 17 chrUextra 4013371 4013781 -24990875 - Gypsy4_I LTR Gypsy -3298 2990 2563 7 615 259 184 0 0 chrUextra 4013882 4013931 -24990725 + Copia_I LTR Copia 2068 2116 -2477 7 615 1107 291 32 39 chrUextra 4014349 4014814 -24989842 + FROGGER_I LTR Copia 407 868 -1209 7 615 7384 25 3 28 chrUextra 4014917 4015852 -24988804 + DOC2_DM LINE Jockey 505 1416 -3377 7 615 7119 57 32 1 chrUextra 4015952 4016887 -24987769 + ACCORD2_I LTR Gypsy 4861 5824 -1388 7 615 3857 194 13 19 chrUextra 4016987 4017913 -24986743 + SAR_DM Satellite Satellite 298 1217 -255 7 615 485 51 0 0 chrUextra 4017863 4017922 -24986734 - ARS406_DM Unknown Unknown -164 189 131 7 615 669 13 0 0 chrUextra 4018022 4018100 -24986556 + (TATAA)n Simple_repeat Simple_repeat 1 78 0 7 615 2788 33 0 0 chrUextra 4018100 4018431 -24986225 - DM1731_LTR LTR Copia -1 335 5 7 615 863 19 19 0 chrUextra 4018431 4018539 -24986117 + (TATAA)n Simple_repeat Simple_repeat 4 113 0 7 615 2752 36 0 9 chrUextra 4018539 4018877 -24985779 - DM1731_LTR LTR Copia -1 335 1 7 615 655 12 0 0 chrUextra 4018877 4018957 -24985699 - DM1731_I LTR Copia 0 3976 3897 7 615 1633 174 8 6 chrUextra 4019057 4019410 -24985246 - ROVER-I_DM LTR Gypsy -241 6343 5990 7 615 2984 162 2 16 chrUextra 4019445 4019991 -24984665 - ROVER-I_DM LTR Gypsy -1276 5308 4771 7 615 3084 14 0 3 chrUextra 4020097 4020454 -24984202 - MDG1_LTR LTR Gypsy 0 442 87 7 615 423 100 0 0 chrUextra 4020454 4020524 -24984132 + (TTA)n Simple_repeat Simple_repeat 3 72 0 7 615 2603 26 48 0 chrUextra 4020539 4020851 -24983805 - PROTOP DNA P -4153 327 1 7 615 1020 52 0 0 chrUextra 4021127 4021262 -24983394 + ARS406_DM Unknown Unknown 52 186 -167 7 615 3452 193 21 20 chrUextra 4021142 4021945 -24982711 - SAR_DM Satellite Satellite -535 921 26 7 615 660 53 52 10 chrUextra 4021945 4022041 -24982615 + ARS406_DM Unknown Unknown 90 189 -164 7 615 3452 193 21 20 chrUextra 4022041 4022062 -24982594 - SAR_DM Satellite Satellite -535 25 1 7 615 192 40 0 0 chrUextra 4022179 4022204 -24982452 + (GA)n Simple_repeat Simple_repeat 2 26 0 7 615 523 224 16 8 chrUextra 4022204 4022330 -24982326 + HETRP_DM Satellite Satellite 1549 1675 -197 7 615 664 185 7 33 chrUextra 4022488 4022639 -24982017 + HETRP_DM Satellite Satellite 1529 1675 -197 7 615 715 179 14 14 chrUextra 4022778 4022925 -24981731 + HETRP_DM Satellite Satellite 1529 1675 -197 7 615 1445 47 19 5 chrUextra 4023816 4024031 -24980625 - TLD2 Unknown Unknown 0 218 1 7 615 723 276 26 30 chrUextra 4023865 4024130 -24980526 - Gypsy4_I LTR Gypsy -3504 2784 2521 7 615 3629 196 24 19 chrUextra 4025267 4026201 -24978455 - SAR_DM Satellite Satellite -470 1002 65 7 615 2050 293 61 7 chrUextra 4026302 4027140 -24977516 - OSVALDO_I LTR Gypsy -3646 3007 2125 7 615 5534 9 4 14 chrUextra 4027337 4028026 -24976630 + Invader2_I LTR Gypsy 3911 4592 0 7 615 2193 12 0 0 chrUextra 4028026 4028272 -24976384 + Invader2_LTR LTR Gypsy 1 246 -20 7 615 373 56 93 0 chrUextra 4028372 4028426 -24976230 + ARS406_DM Unknown Unknown 131 189 -164 7 615 3908 185 19 20 chrUextra 4028381 4029306 -24975350 - SAR_DM Satellite Satellite -255 1217 294 7 615 22 35 0 0 chrUextra 4030020 4030049 -24974607 + AT_rich Low_complexity Low_complexity 1 29 0 7 615 189 74 0 0 chrUextra 4030229 4030256 -24974400 + (TA)n Simple_repeat Simple_repeat 2 28 0 7 615 2726 91 30 11 chrUextra 4030442 4031375 -24973281 + DMSAT6 Satellite Satellite 1 951 -285 7 615 7642 17 2 17 chrUextra 4031475 4032409 -24972247 + IDEFIX_I LTR Gypsy 2284 3203 -2425 7 615 3491 187 24 20 chrUextra 4032511 4033442 -24971214 + SAR_DM Satellite Satellite 1 934 -203 7 615 271 326 41 31 chrUextra 4033618 4033814 -24970842 + ACCORD2_I LTR Gypsy 558 755 -6457 7 615 4643 54 9 6 chrUextra 4033841 4034477 -24970179 - IDEFIX_I LTR Gypsy -1793 3835 3198 7 615 3532 198 17 19 chrUextra 4034577 4035465 -24969191 + SAR_DM Satellite Satellite 384 1269 -203 7 615 1017 60 27 0 chrUextra 4035362 4035511 -24969145 - ARS406_DM Unknown Unknown -164 189 37 7 615 649 0 0 0 chrUextra 4035611 4035683 -24968973 + ROVER-I_DM LTR Gypsy 6513 6584 0 7 615 3167 5 0 24 chrUextra 4035683 4036059 -24968597 + ROVER-LTR_DM LTR Gypsy 1 367 0 7 615 2497 198 6 0 chrUextra 4036059 4036544 -24968112 + ROVER-I_DM LTR Gypsy 3862 4349 -2235 7 615 692 124 0 0 chrUextra 4036645 4036758 -24967898 - ARS406_DM Unknown Unknown -240 113 1 7 615 3724 190 23 20 chrUextra 4036668 4037569 -24967087 + SAR_DM Satellite Satellite 198 1101 -371 7 615 4387 2 0 0 chrUextra 4037679 4038171 -24966485 + FW_DM LINE Jockey 4201 4692 0 7 615 312 104 0 0 chrUextra 4038172 4038220 -24966436 - ARS406_DM Unknown Unknown -305 48 1 7 615 2086 157 21 12 chrUextra 4038177 4038609 -24966047 + SAR_DM Satellite Satellite 602 1037 -435 7 615 3077 73 110 2 chrUextra 4038713 4039148 -24965508 + Gypsy12_I LTR Gypsy 5065 5546 0 7 615 2147 192 30 48 chrUextra 4039147 4039646 -24965010 + Gypsy12_LTR LTR Gypsy 1 490 -1846 7 615 3761 2 0 0 chrUextra 4039747 4040160 -24964496 + NOMAD_LTR LTR Gypsy 106 518 0 7 615 28 48 0 0 chrUextra 4040198 4040240 -24964416 + AT_rich Low_complexity Low_complexity 1 42 0 7 615 514 119 36 0 chrUextra 4040514 4040598 -24964058 - NTS_DM Other Other -150 90 4 7 615 842 176 67 11 chrUextra 4040824 4041038 -24963618 - DNAREP1_DM LINE Penelope -262 332 117 7 615 1067 114 24 0 chrUextra 4041078 4041244 -24963412 - DNAREP1_DM LINE Penelope -419 175 6 7 615 231 139 0 0 chrUextra 4041251 4041294 -24963362 - DM176_I LTR Gypsy -1654 4766 4724 7 615 3291 112 84 117 chrUextra 4041815 4042748 -24961908 - BATUMI_I LTR Pao -6977 986 85 7 615 7715 7 20 1 chrUextra 4042849 4043065 -24961591 - STALKER4_I LTR Gypsy -987 5543 5329 7 615 183 80 0 0 chrUextra 4043065 4043090 -24961566 + (TATG)n Simple_repeat Simple_repeat 4 28 0 7 615 7715 7 20 1 chrUextra 4043090 4043783 -24960873 - STALKER4_I LTR Gypsy -1202 5328 4618 7 615 6723 62 72 4 chrUextra 4043883 4044809 -24959847 - DMCR1A LINE CR1 -2926 1544 556 7 615 2567 83 4 39 chrUextra 4044920 4045847 -24958809 + DMSAT6 Satellite Satellite 1 895 -85 7 615 5818 66 52 27 chrUextra 4045951 4046885 -24957771 + STALKER4_I LTR Gypsy 695 1652 -4878 7 615 2969 170 31 26 chrUextra 4046985 4047918 -24956738 + TAHRE LINE telomeric 9948 10451 -12 7 615 247 330 77 19 chrUextra 4048027 4048234 -24956422 + ACCORD2_I LTR Gypsy 537 755 -6457 7 615 1189 322 32 27 chrUextra 4048261 4048884 -24955772 + MICROPIA_I LTR Gypsy 1 626 -3850 7 615 3831 186 17 17 chrUextra 4049058 4049985 -24954671 + SAR_DM Satellite Satellite 180 1106 -366 7 615 2286 111 47 9 chrUextra 4050085 4050531 -24954125 + DMSAT6 Satellite Satellite 5 467 -3 7 615 2570 102 17 15 chrUextra 4050550 4051018 -24953638 + DMSAT6 Satellite Satellite 1 469 -1 7 615 1158 122 0 0 chrUextra 4051145 4051471 -24953185 + (TA)n Simple_repeat Simple_repeat 1 326 0 7 615 4503 4 0 0 chrUextra 4051473 4051980 -24952676 - DM176_LTR LTR Gypsy 0 507 1 7 615 650 0 0 0 chrUextra 4051980 4052051 -24952605 - DM176_I LTR Gypsy 0 6420 6350 7 615 22 0 0 0 chrUextra 4052228 4052250 -24952406 + AT_rich Low_complexity Low_complexity 1 22 0 7 615 312 232 0 0 chrUextra 4052523 4052592 -24952064 + BS2 LINE Jockey 4146 4214 -507 7 615 1089 106 8 73 chrUextra 4053189 4053446 -24951210 + Gypsy12_I LTR Gypsy 499 795 -4751 7 615 4629 96 36 8 chrUextra 4053448 4054117 -24950539 + Gypsy12_I LTR Gypsy 1363 2050 -3496 7 615 3689 187 12 22 chrUextra 4054232 4055122 -24949534 + SAR_DM Satellite Satellite 373 1253 -219 7 615 866 60 0 0 chrUextra 4055034 4055150 -24949506 - ARS406_DM Unknown Unknown -164 189 74 7 615 5047 2 0 0 chrUextra 4055250 4055839 -24948817 + Copia_I LTR Copia 2257 2845 -1748 7 615 3010 8 0 0 chrUextra 4055832 4056183 -24948473 + Copia_I LTR Copia 3508 3858 -735 7 615 3428 35 5 12 chrUextra 4056283 4056715 -24947941 + BATUMI_I LTR Pao 3046 3474 -4489 7 615 2314 50 9 9 chrUextra 4056708 4057033 -24947623 - BATUMI_I LTR Pao -1212 6751 6427 7 615 1087 62 0 0 chrUextra 4057056 4057216 -24947440 + BATUMI_I LTR Pao 7303 7462 -501 7 615 1155 67 11 32 chrUextra 4057316 4057501 -24947155 - DMCR1A LINE CR1 -35 4435 4255 7 615 1411 66 0 10 chrUextra 4057496 4057695 -24946961 - DMCR1A LINE CR1 -2868 1602 1406 7 615 1563 55 18 0 chrUextra 4057688 4057908 -24946748 - FB4_DM DNA Tc1 -3865 224 1 7 615 1475 178 117 9 chrUextra 4057908 4058249 -24946407 + FW_DM LINE Jockey 1026 1403 -3289 7 615 1649 165 22 16 chrUextra 4058349 4059282 -24945374 - SAR_DM Satellite Satellite -723 939 1 7 615 870 10 0 0 chrUextra 4059382 4059481 -24945175 + (GAGAA)n Simple_repeat Simple_repeat 2 100 0 7 615 503 120 43 0 chrUextra 4059538 4059630 -24945026 + DMCR1A LINE CR1 2677 2772 -1698 7 615 2627 181 98 11 chrUextra 4059662 4060315 -24944341 + DMCR1A LINE CR1 3167 3876 -594 7 615 1182 33 0 7 chrUextra 4060416 4060570 -24944086 + ROO_I LTR Pao 5738 5890 -2366 7 615 21 0 0 0 chrUextra 4061044 4061065 -24943591 + AT_rich Low_complexity Low_complexity 1 21 0 7 615 3755 185 7 9 chrUextra 4061469 4062353 -24942303 - SAR_DM Satellite Satellite -396 1076 195 7 615 738 107 0 0 chrUextra 4062260 4062381 -24942275 + ARS406_DM Unknown Unknown 1 121 -232 7 76 3333 168 10 9 chrUextra 4062483 4063414 -24941242 + SAR_DM Satellite Satellite 1 932 -416 7 616 3749 195 6 9 chrUextra 4063514 4064423 -24940233 - SAR_DM Satellite Satellite -1088 905 1 7 616 707 111 0 0 chrUextra 4064330 4064447 -24940209 + ARS406_DM Unknown Unknown 1 117 -236 7 616 8070 2 20 0 chrUextra 4065579 4066511 -24938145 + R2_DM LINE R2 1005 1955 -1652 7 616 647 133 0 0 chrUextra 4066611 4066724 -24937932 - ARS406_DM Unknown Unknown -240 113 1 7 616 3853 176 10 16 chrUextra 4066631 4067543 -24937113 + SAR_DM Satellite Satellite 195 1100 -372 7 616 252 0 0 0 chrUextra 4067669 4067697 -24936959 + (A)n Simple_repeat Simple_repeat 1 28 0 7 616 1491 57 0 0 chrUextra 4067700 4068132 -24936524 + (TAA)n Simple_repeat Simple_repeat 1 432 0 7 616 3754 0 5 0 chrUextra 4068137 4068575 -24936081 - IVK_DM LINE I 0 5402 4963 7 616 4449 60 2 1 chrUextra 4068689 4069605 -24935051 - Invader6_I LTR Gypsy -97 4002 3163 7 616 7429 21 56 0 chrUextra 4069707 4070639 -24934017 - R1_DM LINE R1 -2839 2517 1534 7 616 4229 131 8 20 chrUextra 4071771 4072673 -24931983 + Gypsy10_I LTR Gypsy 2586 3487 -2801 7 616 6326 33 5 0 chrUextra 4072912 4073735 -24930921 + PROTOP_A DNA P 74 900 -205 7 616 876 69 46 0 chrUextra 4073835 4073965 -24930691 - ROVER-LTR_DM LTR Gypsy -231 136 1 7 616 1711 155 167 10 chrUextra 4073965 4074479 -24930177 - ROVER-I_DM LTR Gypsy 0 6584 5990 7 616 1550 102 0 0 chrUextra 4074514 4074759 -24929897 - ROVER-I_DM LTR Gypsy -1276 5308 5064 7 616 319 276 55 45 chrUextra 4074867 4075168 -24929488 - MDG1_I LTR Gypsy -4501 2112 1748 7 616 7755 4 4 14 chrUextra 4075899 4076831 -24927825 - FW_DM LINE Jockey -464 4228 3306 7 616 7670 30 1 0 chrUextra 4076931 4077863 -24926793 + MAX_I LTR Pao 3784 4716 -3198 7 616 4319 4 0 0 chrUextra 4078348 4078855 -24925801 + DM176_LTR LTR Gypsy 1 507 0 7 616 7655 7 0 15 chrUextra 4078995 4079927 -24924729 + STALKER4_I LTR Gypsy 1480 2397 -4133 7 616 7050 16 3 5 chrUextra 4080027 4080918 -24923738 + Invader2_I LTR Gypsy 2502 3391 -1201 7 616 367 0 0 0 chrUextra 4080916 4080959 -24923697 + Invader2_I LTR Gypsy 2868 2910 -1682 7 616 548 122 19 9 chrUextra 4081059 4081167 -24923489 - ARS406_DM Unknown Unknown -202 151 43 7 616 3272 182 29 11 chrUextra 4081163 4081989 -24922667 + SAR_DM Satellite Satellite 191 1031 -441 7 616 3607 194 13 18 chrUextra 4082098 4083023 -24921633 - SAR_DM Satellite Satellite -300 1172 253 7 616 6247 93 29 15 chrUextra 4083123 4084055 -24920601 - Gypsy12_I LTR Gypsy -71 5475 4531 7 616 2772 220 20 20 chrUextra 4085187 4086069 -24918587 + SAR_DM Satellite Satellite 383 1264 -208 7 616 781 121 7 21 chrUextra 4085975 4086119 -24918537 - ARS406_DM Unknown Unknown -166 187 46 7 616 3302 11 0 27 chrUextra 4086219 4086664 -24917992 + DM176_I LTR Gypsy 2398 2830 -3590 7 616 4165 8 0 0 chrUextra 4086653 4087151 -24917505 + DM176_I LTR Gypsy 3769 4266 -2154 7 616 905 9 0 9 chrUextra 4087251 4087362 -24917294 - MDG3_I LTR Gypsy -4876 110 1 7 616 2241 15 0 0 chrUextra 4087361 4087628 -24917028 - MDG3_LTR LTR Gypsy 0 267 1 7 616 4577 18 0 4 chrUextra 4087628 4088183 -24916473 + Gypsy2_I LTR Gypsy 5335 5887 -248 7 616 590 118 0 0 chrUextra 4088285 4088378 -24916278 + Gypsy6A_LTR LTR Gypsy 210 302 -118 7 616 33 25 0 0 chrUextra 4088605 4088645 -24916011 + AT_rich Low_complexity Low_complexity 1 40 0 7 616 2370 14 14 0 chrUextra 4089316 4089600 -24915056 + R1_DM LINE R1 5069 5356 0 7 616 1826 63 8 0 chrUextra 4089633 4089886 -24914770 + R1_DM LINE R1 1 255 -5101 7 616 1786 54 0 4 chrUextra 4089887 4090130 -24914526 + R1_DM LINE R1 374 615 -4741 7 616 1030 15 8 15 chrUextra 4090114 4090247 -24914409 + R1_DM LINE R1 1938 2069 -3287 7 616 2471 85 34 26 chrUextra 4090347 4091279 -24913377 + DMSAT6 Satellite Satellite 1 940 -51 7 616 6192 18 1 1 chrUextra 4091379 4092119 -24912537 + R2_DM LINE R2 2535 3274 -333 7 616 1450 17 0 0 chrUextra 4092139 4092311 -24912345 + LSU-rRNA_Dme rRNA rRNA 2582 2753 -1147 7 616 21 89 0 0 chrUextra 4092560 4092616 -24912040 + AT_rich Low_complexity Low_complexity 1 56 0 7 616 21 57 0 0 chrUextra 4092654 4092689 -24911967 + AT_rich Low_complexity Low_complexity 1 35 0 7 616 26 30 0 0 chrUextra 4092735 4092768 -24911888 + AT_rich Low_complexity Low_complexity 1 33 0 7 616 1595 34 0 14 chrUextra 4093135 4093343 -24911313 - PROTOP DNA P 0 4480 4276 7 616 3076 156 101 69 chrUextra 4093443 4094374 -24910282 + G_DM LINE Jockey 695 1655 -2691 7 616 6124 83 46 3 chrUextra 4095505 4096436 -24908220 + TART_B1 LINE telomeric 2348 3318 -7336 7 616 7421 19 8 0 chrUextra 4096536 4097467 -24907189 + STALKER4_I LTR Gypsy 2653 3590 -2940 7 616 987 32 0 0 chrUextra 4098106 4098229 -24906427 + (CAAGA)n Simple_repeat Simple_repeat 4 126 0 7 616 4286 12 0 0 chrUextra 4099021 4099529 -24905127 - Copia2_I LTR Copia -2288 1874 1367 7 616 4800 2 7 0 chrUextra 4099629 4100190 -24904466 + DMRT1B LINE R1 4619 5183 0 7 616 1582 26 0 0 chrUextra 4100196 4100386 -24904270 - R1_DM LINE R1 -760 4596 4407 7 616 1266 13 0 0 chrUextra 4100407 4100560 -24904096 - R1_DM LINE R1 -1074 4282 4130 7 616 4245 27 2 0 chrUextra 4100660 4101186 -24903470 + FW_DM LINE Jockey 4166 4692 0 7 616 2877 44 98 0 chrUextra 4101180 4101588 -24903068 + Gypsy7_I LTR Gypsy 1489 1936 -3048 7 616 3111 191 46 14 chrUextra 4101691 4102622 -24902034 + SAR_DM Satellite Satellite 1 960 -216 7 616 235 167 0 0 chrUextra 4102722 4102770 -24901886 - ARS406_DM Unknown Unknown -305 48 1 7 616 3685 180 27 20 chrUextra 4102731 4103650 -24901006 + SAR_DM Satellite Satellite 247 1172 -300 7 616 2312 100 30 29 chrUextra 4104815 4105715 -24898941 - DMSAT6 Satellite Satellite 0 900 1 7 616 4724 0 4 0 chrUextra 4105815 4106370 -24898286 + Copia_I LTR Copia 1128 1684 -2909 7 616 3249 5 0 0 chrUextra 4106358 4106746 -24897910 + Copia_I LTR Copia 2041 2428 -2165 7 616 2526 96 25 56 chrUextra 4106846 4107289 -24897367 - TART LINE telomeric -8726 5751 5323 7 616 1598 147 49 18 chrUextra 4107269 4107595 -24897061 - TART LINE telomeric -10594 3883 3548 7 616 1247 6 90 0 chrUextra 4107593 4107749 -24896907 - PROTOP DNA P -4310 170 1 7 616 7328 29 28 3 chrUextra 4107877 4108808 -24895848 - G2_DM LINE Jockey -1201 1901 948 7 616 3555 188 28 18 chrUextra 4108913 4109839 -24894817 - SAR_DM Satellite Satellite -425 934 1 7 616 6897 42 26 8 chrUextra 4109939 4110870 -24893786 - R1_DM LINE R1 -4302 1054 107 7 616 2958 182 6 6 chrUextra 4110972 4111892 -24892764 - SAR_DM Satellite Satellite -658 920 1 7 616 313 118 188 14 chrUextra 4112001 4112070 -24892586 - Gypsy8_I LTR Gypsy -3330 1017 937 7 616 1403 88 15 0 chrUextra 4112065 4112269 -24892387 - Gypsy8_I LTR Gypsy -3867 480 274 7 616 2135 87 12 48 chrUextra 4112237 4112930 -24891726 + DMSAT6 Satellite Satellite 1 667 -151 7 616 2229 7 4 0 chrUextra 4113033 4113308 -24891348 + Copia_LTR LTR Copia 1 276 0 7 616 433 0 0 0 chrUextra 4113308 4113358 -24891298 + Copia_I LTR Copia 1 50 -4543 7 616 5228 5 0 2 chrUextra 4113356 4113963 -24890693 - POGO DNA Pogo -1418 703 98 7 616 728 46 0 115 chrUextra 4114370 4114492 -24890164 + Baggins1 LINE LOA 5346 5453 0 7 616 408 88 0 0 chrUextra 4114937 4114994 -24889662 + Baggins1 LINE LOA 4791 4847 -606 7 616 474 233 43 8 chrUextra 4115271 4115388 -24889268 - HETRP_DM Satellite Satellite -203 1669 1549 7 616 315 49 0 0 chrUextra 4115388 4115429 -24889227 + (TC)n Simple_repeat Simple_repeat 2 42 0 7 616 547 192 8 16 chrUextra 4115587 4115709 -24888947 - HETRP_DM Satellite Satellite -203 1669 1549 7 616 315 49 0 0 chrUextra 4115709 4115750 -24888906 + (TC)n Simple_repeat Simple_repeat 2 42 0 7 616 514 226 0 9 chrUextra 4115908 4116024 -24888632 - HETRP_DM Satellite Satellite -203 1669 1555 7 616 1054 146 142 0 chrUextra 4116125 4116358 -24888298 + MAX_LTR LTR Pao 56 321 0 7 616 2070 34 3 88 chrUextra 4116358 4116677 -24887979 + MAX_I LTR Pao 1 292 -7622 7 616 3190 199 28 17 chrUextra 4117156 4118073 -24886583 - SAR_DM Satellite Satellite -308 1164 238 7 616 2266 106 34 14 chrUextra 4118199 4119083 -24885573 - DMSAT6 Satellite Satellite -19 902 1 7 616 2102 0 0 4 chrUextra 4119218 4119461 -24885195 - TABOR_LTR LTR Gypsy -264 242 1 7 616 5316 12 7 4 chrUextra 4119461 4120149 -24884507 - STALKER4_I LTR Gypsy -118 6412 5723 7 616 3627 198 10 12 chrUextra 4120249 4121150 -24883506 - SAR_DM Satellite Satellite -1094 899 1 7 616 733 114 0 8 chrUextra 4121056 4121180 -24883476 + ARS406_DM Unknown Unknown 1 123 -230 7 616 2525 143 28 21 chrUextra 4121289 4121823 -24882833 + SAR_DM Satellite Satellite 366 903 -569 7 616 1730 167 3 14 chrUextra 4121838 4122209 -24882447 + SAR_DM Satellite Satellite 496 862 -610 7 616 3738 173 21 25 chrUextra 4122315 4123233 -24881423 - SAR_DM Satellite Satellite -313 1159 246 7 616 256 146 0 0 chrUextra 4123193 4123241 -24881415 + ARS406_DM Unknown Unknown 1 48 -305 7 616 5705 5 0 0 chrUextra 4123341 4124007 -24880649 - FW_DM LINE Jockey -4012 680 15 7 616 1247 174 4 11 chrUextra 4124003 4124032 -24880624 - SAR_DM Satellite Satellite -441 1031 938 7 616 1248 90 0 0 chrUextra 4124032 4124221 -24880435 + ARS406_DM Unknown Unknown 1 189 -164 7 616 1247 174 4 11 chrUextra 4124221 4124271 -24880385 - SAR_DM Satellite Satellite -441 937 766 7 616 7185 33 16 10 chrUextra 4124371 4125301 -24879355 + BATUMI_I LTR Pao 1472 2407 -5556 7 616 7140 25 3 0 chrUextra 4125401 4126277 -24878379 + DIVER2_I LTR Pao 3269 4147 0 7 616 428 38 0 0 chrUextra 4126277 4126330 -24878326 + DIVER2_LTR LTR Pao 1 53 -332 7 616 4926 3 2 2 chrUextra 4126431 4127005 -24877651 + LSU-rRNA_Dme rRNA rRNA 2113 2686 -1214 7 616 2902 6 3 6 chrUextra 4127002 4127361 -24877295 + R1_DM LINE R1 852 1209 -4147 7 616 3866 0 0 2 chrUextra 4127461 4127914 -24876742 - HETA LINE telomeric -3854 2227 1776 7 616 1113 55 0 12 chrUextra 4127914 4128079 -24876577 - TAHRE LINE telomeric -12 10451 10289 7 616 2067 8 0 11 chrUextra 4128080 4128333 -24876323 - TART LINE telomeric -6439 8038 7786 7 616 348 43 0 0 chrUextra 4128333 4128379 -24876277 + (CTTTA)n Simple_repeat Simple_repeat 3 48 0 7 616 3548 188 23 19 chrUextra 4128492 4129417 -24875239 + SAR_DM Satellite Satellite 321 1248 -224 7 616 6866 53 5 0 chrUextra 4130551 4131481 -24873175 - STALKER4_I LTR Gypsy -340 6190 5256 7 616 7475 27 13 0 chrUextra 4131581 4132511 -24872145 - R1_DM LINE R1 -2135 3221 2280 7 616 472 34 0 0 chrUextra 4132611 4132670 -24871986 - BATUMI_I LTR Pao -327 7636 7578 7 616 6185 60 16 1 chrUextra 4132657 4133541 -24871115 + MDG1_I LTR Gypsy 5303 6199 -397 7 616 680 0 0 0 chrUextra 4133641 4133720 -24870936 - ROO_LTR LTR Pao -349 79 1 7 616 2130 27 0 0 chrUextra 4134312 4134571 -24870085 + PROTOP_A DNA P 1 259 -846 7 616 7195 26 53 8 chrUextra 4134671 4135599 -24869057 - R1_DM LINE R1 -1476 3880 2911 7 616 4721 58 41 67 chrUextra 4135756 4136631 -24868025 + BATUMI_I LTR Pao 568 1419 -6544 7 616 3925 64 44 9 chrUextra 4136731 4137623 -24867033 + PROTOP_A DNA P 316 1105 0 7 616 3394 190 16 18 chrUextra 4137761 4138691 -24865965 + SAR_DM Satellite Satellite 1 928 -208 7 616 7527 11 10 3 chrUextra 4138791 4139721 -24864935 - G_DM LINE Jockey -1450 2896 1961 7 616 411 35 18 0 chrUextra 4139821 4139878 -24864778 - ARS406_DM Unknown Unknown -206 147 90 7 616 1987 186 17 8 chrUextra 4139883 4140739 -24863917 + SAR_DM Satellite Satellite 1 863 -532 7 616 3726 186 13 19 chrUextra 4140851 4141781 -24862875 - SAR_DM Satellite Satellite -439 924 1 7 616 2415 108 27 13 chrUextra 4141882 4142807 -24861849 - DMSAT6 Satellite Satellite -71 938 1 7 616 2811 76 80 13 chrUextra 4142911 4143511 -24861145 + Gypsy12_I LTR Gypsy 4907 5546 0 7 616 1475 183 15 25 chrUextra 4143510 4143835 -24860821 + Gypsy12_LTR LTR Gypsy 1 322 -2014 7 616 3199 218 17 32 chrUextra 4143941 4145898 -24858758 - SAR_DM Satellite Satellite -620 1926 1 7 616 1579 5 0 11 chrUextra 4145998 4146189 -24858467 - DIVER_I LTR Pao -5454 189 1 7 616 1927 5 0 0 chrUextra 4146210 4146434 -24858222 - DIVER_LTR LTR Pao 0 224 1 7 616 6815 40 43 0 chrUextra 4148056 4148985 -24855671 + ZAM_I LTR Gypsy 2595 3563 -3927 7 616 2207 8 0 0 chrUextra 4149085 4149346 -24855310 + MAX_I LTR Pao 7654 7914 0 7 616 2740 9 0 0 chrUextra 4149346 4149667 -24854989 + MAX_LTR LTR Pao 1 321 0 7 616 464 111 133 0 chrUextra 4149667 4149751 -24854905 + MAX_I LTR Pao 1097 1192 -6722 7 616 401 126 213 150 chrUextra 4149760 4150013 -24854643 + MAX_I LTR Pao 1056 1324 -6590 7 616 460 279 36 60 chrUextra 4150125 4150473 -24854183 - DM297_I LTR Gypsy -3004 3416 2675 7 616 1523 23 19 0 chrUextra 4150473 4150687 -24853969 - TLD2 Unknown Unknown 0 218 1 7 616 460 279 36 60 chrUextra 4150687 4150733 -24853923 - DM297_I LTR Gypsy -3004 2674 2573 7 616 543 324 1 1 chrUextra 4151777 4151990 -24852666 - MICROPIA_I LTR Gypsy -626 3850 3662 7 616 6944 42 21 13 chrUextra 4152175 4153099 -24851557 - DMCR1A LINE CR1 -1955 2515 1585 7 616 5934 4 28 0 chrUextra 4153201 4153908 -24850748 - DMRT1A LINE R1 -3177 2006 1280 7 616 1727 19 5 5 chrUextra 4153913 4154130 -24850526 + FW_DM LINE Jockey 3229 3445 -1247 7 616 7661 5 15 1 chrUextra 4154230 4155159 -24849497 + DM176_I LTR Gypsy 2989 3930 -2490 7 616 2634 134 12 20 chrUextra 4155260 4155754 -24848902 + TAHRE LINE telomeric 9974 10463 0 7 616 2761 109 9 5 chrUextra 4155754 4156188 -24848468 + TART_B1 LINE telomeric 921 1356 -9298 7 616 2550 83 41 12 chrUextra 4156290 4157216 -24847440 - DMSAT6 Satellite Satellite -3 953 1 7 616 3475 192 11 16 chrUextra 4157317 4158245 -24846411 + SAR_DM Satellite Satellite 1 922 -216 7 616 3603 192 19 21 chrUextra 4158349 4159275 -24845381 - SAR_DM Satellite Satellite -425 924 1 7 616 7354 35 12 0 chrUextra 4159377 4160304 -24844352 + R1_DM LINE R1 1292 2229 -3127 7 616 1582 0 0 0 chrUextra 4160404 4160588 -24844068 - NOMAD_I LTR Gypsy -6388 184 1 7 616 4527 0 0 0 chrUextra 4160588 4161106 -24843550 - NOMAD_LTR LTR Gypsy 0 518 1 7 616 347 91 0 70 chrUextra 4161118 4161189 -24843467 + BATUMI_I LTR Pao 704 769 -7194 7 616 547 110 10 20 chrUextra 4161230 4161332 -24843324 + BATUMI_I LTR Pao 749 849 -7114 7 616 1555 132 80 6 chrUextra 4161433 4161745 -24842911 + Invader1_I LTR Gypsy 2852 3186 0 7 616 479 103 10 103 chrUextra 4161745 4161842 -24842814 + Invader1_LTR LTR Gypsy 1 88 -335 7 616 481 148 37 0 chrUextra 4161843 4161924 -24842732 + Invader1_LTR LTR Gypsy 340 423 0 7 616 1189 110 312 34 chrUextra 4161946 4162358 -24842298 + PROTOP DNA P 424 950 -3530 7 616 2469 174 88 12 chrUextra 4163491 4164419 -24840237 + Gypsy12_I LTR Gypsy 1016 2014 -3532 7 616 2579 3 0 0 chrUextra 4164520 4164817 -24839839 + LSU-rRNA_Dme rRNA rRNA 2288 2584 -1316 7 616 5623 2 0 0 chrUextra 4164810 4165449 -24839207 + R2_DM LINE R2 1043 1681 -1926 7 616 22 35 0 0 chrUextra 4165620 4165649 -24839007 + AT_rich Low_complexity Low_complexity 1 29 0 7 616 224 185 31 0 chrUextra 4165935 4166000 -24838656 + (TAA)n Simple_repeat Simple_repeat 2 68 0 7 616 262 47 14 72 chrUextra 4167428 4167497 -24837159 + (TAAAAA)n Simple_repeat Simple_repeat 2 66 0 7 616 40 21 0 0 chrUextra 4167972 4168019 -24836637 + AT_rich Low_complexity Low_complexity 1 47 0 7 616 1541 5 0 5 chrUextra 4168636 4168821 -24835835 - ROO_I LTR Pao -8072 184 1 7 616 3766 0 0 0 chrUextra 4168821 4169249 -24835407 - ROO_LTR LTR Pao 0 428 1 7 616 2751 9 0 0 chrUextra 4169249 4169565 -24835091 + IVK_DM LINE I 3264 3579 -1823 7 616 1041 96 0 0 chrUextra 4169668 4169846 -24834810 + (ACATG)n Simple_repeat Simple_repeat 3 180 0 7 616 1004 96 0 6 chrUextra 4169852 4170030 -24834626 + (CAAGA)n Simple_repeat Simple_repeat 4 180 0 7 616 1041 96 0 0 chrUextra 4170030 4170567 -24834089 + (ACATG)n Simple_repeat Simple_repeat 1 537 0 7 616 2562 23 0 0 chrUextra 4170694 4171004 -24833652 - STALKER4_LTR LTR Gypsy -92 310 1 7 616 4279 25 33 3 chrUextra 4171004 4171612 -24833044 - STALKER4_I LTR Gypsy 0 6530 5905 7 616 313 0 0 0 chrUextra 4171724 4171765 -24832891 - NTS_DM Other Other -125 115 75 7 616 1217 13 0 7 chrUextra 4171760 4171912 -24832744 - NTS_DM Other Other -89 151 1 7 616 1799 17 17 13 chrUextra 4171912 4172151 -24832505 - NTS_DM Other Other 0 240 1 7 616 284 0 75 57 chrUextra 4172151 4172204 -24832452 - NTS_DM Other Other 0 240 187 7 616 269 30 0 0 chrUextra 4172204 4172237 -24832419 - NTS_DM Other Other -206 34 2 7 616 295 308 65 14 chrUextra 4172371 4172648 -24832008 + G6_DM LINE Jockey 246 536 -1506 7 616 4404 0 2 0 chrUextra 4172752 4173275 -24831381 + TABOR_I LTR Gypsy 490 1013 -5323 7 616 1937 108 59 64 chrUextra 4173275 4173681 -24830975 - Gypsy6_LTR LTR Gypsy -3 404 1 7 616 246 150 0 0 chrUextra 4173853 4173893 -24830763 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 616 238 235 0 0 chrUextra 4173945 4173996 -24830660 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 7 616 246 150 0 0 chrUextra 4174036 4174076 -24830580 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 616 29 28 0 0 chrUextra 4174081 4174117 -24830539 + AT_rich Low_complexity Low_complexity 1 36 0 7 616 4483 0 2 0 chrUextra 4174197 4174709 -24829947 - LSU-rRNA_Dme rRNA rRNA 0 3900 3388 7 616 343 129 14 14 chrUextra 4174809 4174880 -24829776 + ARS406_DM Unknown Unknown 119 189 -164 7 616 3372 188 31 29 chrUextra 4174836 4175737 -24828919 - SAR_DM Satellite Satellite -261 903 1 7 616 322 178 50 101 chrUextra 4175896 4176015 -24828641 - Copia_I LTR Copia -80 4513 4401 7 616 1320 198 50 7 chrUextra 4176465 4176765 -24827891 + HETA LINE telomeric 4031 4343 -1738 7 616 4399 24 2 4 chrUextra 4177893 4178443 -24826213 - ACCORD2_I LTR Gypsy -1522 5690 5142 7 616 3253 10 0 0 chrUextra 4178437 4178821 -24825835 - ACCORD2_I LTR Gypsy -2371 4841 4458 7 616 3719 191 12 21 chrUextra 4178921 4179849 -24824807 + SAR_DM Satellite Satellite 1 920 -216 7 616 647 36 342 0 chrUextra 4179951 4180062 -24824594 - PROTOP DNA P -4331 149 1 7 616 310 89 0 0 chrUextra 4180065 4180110 -24824546 + DMRT1B LINE R1 5125 5169 -14 7 616 1400 149 35 0 chrUextra 4180308 4180569 -24824087 + Invader3_I LTR Gypsy 4491 4760 -128 7 616 994 137 191 0 chrUextra 4180597 4180801 -24823855 - Invader3_I LTR Gypsy -961 3927 3685 7 616 3828 183 14 21 chrUextra 4180977 4181905 -24822751 + SAR_DM Satellite Satellite 1 921 -208 7 616 1341 130 3 157 chrUextra 4182008 4182346 -24822310 - TART LINE telomeric -7207 7270 6985 7 616 437 45 88 15 chrUextra 4182346 4182414 -24822242 - TAHRE LINE telomeric -11 10452 10380 7 616 779 29 29 0 chrUextra 4182413 4182518 -24822138 - TART LINE telomeric -3814 10663 10556 7 616 1549 138 181 52 chrUextra 4182529 4182933 -24821723 - TART LINE telomeric -4201 10276 9821 7 616 5222 60 6 3 chrUextra 4183033 4183735 -24820921 - R1_DM LINE R1 -4652 704 1 7 616 1669 10 0 0 chrUextra 4183768 4183961 -24820695 - R1_DM LINE R1 0 5356 5164 7 616 3781 186 16 20 chrUextra 4184065 4184984 -24819672 + SAR_DM Satellite Satellite 1 916 -208 7 616 273 189 0 0 chrUextra 4185244 4185297 -24819359 + NOMAD_I LTR Gypsy 6520 6572 0 7 616 1112 135 136 47 chrUextra 4185645 4185924 -24818732 - DNAREP1_DM LINE Penelope -201 393 90 7 616 3568 39 0 0 chrUextra 4186117 4186576 -24818080 + G2_DM LINE Jockey 2070 2528 -574 7 616 1124 50 0 0 chrUextra 4186576 4186736 -24817920 - G2_DM LINE Jockey -9 3093 2934 7 616 1940 64 42 48 chrUextra 4186732 4187044 -24817612 + G2_DM LINE Jockey 2527 2836 -266 7 616 1732 104 16 60 chrUextra 4187147 4187463 -24817193 + Gypsy6A_LTR LTR Gypsy 1 302 -118 7 616 3008 22 0 0 chrUextra 4187514 4187876 -24816780 - PROTOP_A DNA P -743 362 1 7 616 6920 25 0 3 chrUextra 4188173 4189032 -24815624 + FW_DM LINE Jockey 3837 4692 0 7 616 7837 4 9 1 chrUextra 4189201 4190129 -24814527 + ACCORD_I LTR Gypsy 2916 3850 -2438 7 616 725 108 0 0 chrUextra 4190229 4190349 -24814307 - ARS406_DM Unknown Unknown -232 121 2 7 616 3607 178 14 15 chrUextra 4190254 4191140 -24813516 + SAR_DM Satellite Satellite 192 1076 -396 7 616 2473 87 29 26 chrUextra 4191257 4192185 -24812471 + DMSAT6 Satellite Satellite 1 930 -80 7 616 1030 0 0 0 chrUextra 4192285 4192402 -24812254 - BATUMI_I LTR Pao -7846 117 1 7 616 1968 26 30 15 chrUextra 4192402 4192670 -24811986 - BATUMI_LTR LTR Pao 0 272 1 7 616 21 0 0 0 chrUextra 4192807 4192828 -24811828 + AT_rich Low_complexity Low_complexity 1 21 0 7 616 697 21 0 0 chrUextra 4193313 4193407 -24811249 - QUASIMODO_I LTR Gypsy -474 5586 5493 7 616 5379 58 64 10 chrUextra 4193418 4194241 -24810415 - QUASIMODO_I LTR Gypsy -885 5175 4308 7 617 1777 5 0 0 chrUextra 4194341 4194546 -24810110 + DIVER_I LTR Pao 5439 5643 0 7 617 1915 5 0 0 chrUextra 4194546 4194770 -24809886 + DIVER_LTR LTR Pao 1 224 0 7 617 3385 38 0 2 chrUextra 4194788 4195212 -24809444 + ROO_LTR LTR Pao 6 428 0 7 617 41 58 0 0 chrUextra 4195557 4195626 -24809030 + AT_rich Low_complexity Low_complexity 1 69 0 7 617 477 81 207 0 chrUextra 4195966 4196053 -24808603 + DNAREP1_DM LINE Penelope 426 530 -64 7 617 752 140 115 72 chrUextra 4196421 4196629 -24808027 - TIRANT_LTR LTR Gypsy -200 217 1 7 617 932 41 16 0 chrUextra 4196899 4197021 -24807635 - Baggins1 LINE LOA -15 5438 5315 7 617 1681 37 124 0 chrUextra 4197017 4197258 -24807398 - Baggins1 LINE LOA -456 4997 4727 7 617 3105 204 29 10 chrUextra 4197425 4198353 -24806303 + SAR_DM Satellite Satellite 1 946 -208 7 617 852 91 0 12 chrUextra 4198461 4198625 -24806031 - RSP Satellite Satellite 0 162 1 7 617 836 72 0 15 chrUextra 4198664 4199062 -24805594 - RSP Satellite Satellite 0 392 1 7 617 804 96 0 14 chrUextra 4199102 4199381 -24805275 - RSP Satellite Satellite -1 275 1 7 617 3326 194 22 22 chrUextra 4199481 4200409 -24804247 - SAR_DM Satellite Satellite -488 984 57 7 617 26 50 0 0 chrUextra 4201177 4201217 -24803439 + AT_rich Low_complexity Low_complexity 1 40 0 7 617 3465 0 0 2 chrUextra 4201556 4201959 -24802697 - STALKER4_LTR LTR Gypsy 0 402 1 7 617 4195 18 2 0 chrUextra 4201959 4202465 -24802191 - PROTOP_A DNA P -588 517 11 7 617 1281 61 0 0 chrUextra 4202889 4203069 -24801587 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 7 617 527 48 0 12 chrUextra 4203593 4203678 -24800978 + NTS_DM Other Other 118 201 -39 7 617 21 57 0 0 chrUextra 4203678 4203713 -24800943 + AT_rich Low_complexity Low_complexity 1 35 0 7 617 832 9 9 27 chrUextra 4203739 4203850 -24800806 + NTS_DM Other Other 25 133 -107 7 617 735 0 0 0 chrUextra 4203850 4203935 -24800721 + NTS_DM Other Other 38 122 -118 7 617 3367 5 7 7 chrUextra 4203935 4204349 -24800307 - DM297_LTR LTR Gypsy 0 414 1 7 617 1394 12 0 0 chrUextra 4204349 4204521 -24800135 - DM297_I LTR Gypsy 0 6167 5996 7 617 2245 29 0 0 chrUextra 4204907 4205188 -24799468 + IDEFIX_I LTR Gypsy 1 281 -5347 7 617 2801 30 69 0 chrUextra 4205188 4205549 -24799107 + IDEFIX_I LTR Gypsy 1605 1990 -3638 7 617 3572 185 29 21 chrUextra 4205650 4206557 -24798099 - SAR_DM Satellite Satellite -313 1159 246 7 617 341 100 17 0 chrUextra 4206517 4206577 -24798079 + ARS406_DM Unknown Unknown 1 61 -292 7 617 4599 11 0 0 chrUextra 4206677 4207222 -24797434 - FW_DM LINE Jockey -1866 2826 2282 7 617 3217 10 0 0 chrUextra 4207220 4207604 -24797052 - FW_DM LINE Jockey -2787 1905 1522 7 617 885 123 0 0 chrUextra 4207705 4207884 -24796772 + (TA)n Simple_repeat Simple_repeat 2 180 0 7 617 4033 84 52 41 chrUextra 4207887 4208623 -24796033 - I_DM LINE I -3133 3098 2355 7 617 3326 62 61 18 chrUextra 4208731 4209239 -24795417 - QUASIMODO_I LTR Gypsy -1282 4778 4249 7 617 2654 61 8 3 chrUextra 4209239 4209601 -24795055 - Gypsy10_LTR LTR Gypsy 0 364 1 7 617 384 58 0 0 chrUextra 4209601 4209653 -24795003 - Gypsy10_I LTR Gypsy 0 5278 5227 7 617 3606 0 0 0 chrUextra 4209761 4210171 -24794485 + ROO_LTR LTR Pao 19 428 0 7 617 4374 8 0 0 chrUextra 4210171 4210685 -24793971 - IVK_DM LINE I -2134 3268 2755 7 617 3606 199 10 16 chrUextra 4210788 4211711 -24792945 - SAR_DM Satellite Satellite -224 1248 332 7 617 6875 31 0 52 chrUextra 4211815 4212739 -24791917 + R1_DM LINE R1 1254 2129 -3227 7 617 2195 134 12 15 chrUextra 4212839 4213766 -24790890 - DMSAT6 Satellite Satellite -102 924 1 7 617 7597 30 0 0 chrUextra 4213868 4214793 -24789863 - R1_DM LINE R1 -2565 2791 1867 7 617 6487 30 5 0 chrUextra 4215920 4216728 -24787928 + R1_DM LINE R1 4458 5269 -87 7 617 940 59 0 0 chrUextra 4216728 4216847 -24787809 + R1_DM LINE R1 1257 1375 -3981 7 617 754 98 0 0 chrUextra 4216947 4217069 -24787587 - ARS406_DM Unknown Unknown -231 122 1 7 617 3700 176 24 20 chrUextra 4216963 4217870 -24786786 + SAR_DM Satellite Satellite 180 1090 -382 7 617 7803 1 17 0 chrUextra 4217974 4218901 -24785755 - DM176_I LTR Gypsy -1687 4733 3791 7 617 6966 50 2 1 chrUextra 4219001 4219913 -24784743 - R1_DM LINE R1 -3806 1550 638 7 617 3359 191 19 18 chrUextra 4220028 4220952 -24783704 - SAR_DM Satellite Satellite -444 924 1 7 617 760 323 15 16 chrUextra 4221100 4221566 -24783090 + Gypsy4_I LTR Gypsy 2360 3243 -3769 7 617 615 12 24 0 chrUextra 4221495 4221580 -24783076 + TLD2 Unknown Unknown 1 87 -131 7 617 286 281 20 40 chrUextra 4221567 4221719 -24782937 + DM297_I LTR Gypsy 2878 2991 -3176 7 617 345 325 0 7 chrUextra 4221827 4221982 -24782674 + GTWIN_I LTR Gypsy 3254 3407 -3014 7 617 6152 1 0 11 chrUextra 4222082 4222863 -24781793 + STALKER4_I LTR Gypsy 5759 6530 0 7 617 1181 0 0 7 chrUextra 4222863 4223009 -24781647 + STALKER4_LTR LTR Gypsy 1 145 -257 7 617 23 68 0 0 chrUextra 4223163 4223207 -24781449 + AT_rich Low_complexity Low_complexity 1 44 0 7 617 21 89 0 0 chrUextra 4223245 4223301 -24781355 + AT_rich Low_complexity Low_complexity 1 56 0 7 617 543 40 0 0 chrUextra 4224136 4224210 -24780446 + ARS406_DM Unknown Unknown 85 158 -195 7 617 657 53 53 0 chrUextra 4224207 4224302 -24780354 + ARS406_DM Unknown Unknown 90 189 -164 7 617 1821 180 12 8 chrUextra 4224217 4225046 -24779610 - SAR_DM Satellite Satellite -569 832 1 7 617 327 0 0 0 chrUextra 4225163 4225200 -24779456 - Invader1_I LTR Gypsy -3149 37 1 7 617 3602 7 5 0 chrUextra 4225200 4225621 -24779035 - Invader1_LTR LTR Gypsy 0 423 1 7 617 218 212 15 0 chrUextra 4225692 4225758 -24778898 + (TAA)n Simple_repeat Simple_repeat 2 68 0 7 617 3505 196 11 28 chrUextra 4227220 4228144 -24776512 - SAR_DM Satellite Satellite -224 1248 341 7 617 3761 40 2 2 chrUextra 4228244 4229171 -24775485 + R1_DM LINE R1 1004 1974 -3382 7 617 568 51 0 0 chrUextra 4229290 4229369 -24775287 + G2_DM LINE Jockey 2935 3013 -89 7 617 3227 65 29 0 chrUextra 4229364 4229813 -24774843 - G2_DM LINE Jockey -114 2988 2527 7 617 1156 43 0 0 chrUextra 4229809 4229971 -24774685 + G2_DM LINE Jockey 2934 3095 -7 7 617 1644 66 0 0 chrUextra 4229971 4230198 -24774458 - G2_DM LINE Jockey -32 3070 2844 7 617 2057 48 149 4 chrUextra 4230298 4230917 -24773739 - PROTOP DNA P -238 867 296 7 617 264 188 0 0 chrUextra 4230917 4230981 -24773675 - Gypsy8_I LTR Gypsy -4054 293 230 7 617 3231 40 0 0 chrUextra 4231325 4231730 -24772926 - G5A_DM LINE Jockey -205 2636 2232 7 617 242 273 198 0 chrUextra 4231758 4231879 -24772777 + BURDOCK_I LTR Gypsy 1906 2050 -3810 7 617 864 248 42 11 chrUextra 4231873 4232158 -24772498 + BURDOCK_I LTR Gypsy 2155 2448 -3412 7 617 1881 58 39 0 chrUextra 4233019 4233279 -24771377 + Baggins1 LINE LOA 2000 2269 -3184 7 617 3439 189 15 28 chrUextra 4233381 4234288 -24770368 + SAR_DM Satellite Satellite 361 1256 -216 7 617 797 48 0 0 chrUextra 4234197 4234302 -24770354 - ARS406_DM Unknown Unknown -164 189 85 7 617 2004 141 76 22 chrUextra 4234498 4235117 -24769539 - Stalker2_I LTR Gypsy -5531 999 291 7 617 27 0 0 0 chrUextra 4235141 4235168 -24769488 + AT_rich Low_complexity Low_complexity 1 27 0 7 617 276 138 0 33 chrUextra 4235255 4235315 -24769341 - Stalker3_LTR LTR Gypsy 0 372 315 7 617 3212 8 28 0 chrUextra 4235433 4235827 -24768829 + TAHRE LINE telomeric 10051 10455 -8 7 617 3882 2 2 6 chrUextra 4235885 4236360 -24768296 + HETA LINE telomeric 454 926 -5155 7 617 3633 179 27 29 chrUextra 4236465 4237387 -24767269 - SAR_DM Satellite Satellite -314 1158 239 7 617 6526 22 42 31 chrUextra 4237487 4238350 -24766306 - CIRCE LINE Composite -5484 872 1 7 617 497 16 0 16 chrUextra 4238350 4238414 -24766242 - CIRCE LINE Composite 0 6356 6294 7 617 26 64 0 0 chrUextra 4238637 4238684 -24765972 + AT_rich Low_complexity Low_complexity 1 47 0 7 617 501 336 38 7 chrUextra 4238985 4239275 -24765381 - GTWIN_I LTR Gypsy -2883 3538 3162 7 617 1191 96 75 0 chrUextra 4239541 4239728 -24764928 - DNAREP1_DM LINE Penelope -30 564 364 7 617 291 250 45 0 chrUextra 4239815 4239903 -24764753 - DIVER2_I LTR Pao -34 4113 4022 7 617 898 125 113 5 chrUextra 4240109 4240294 -24764362 + DNAREP1_DM LINE Penelope 1 205 -389 7 617 23 0 0 0 chrUextra 4240352 4240375 -24764281 + AT_rich Low_complexity Low_complexity 1 23 0 7 617 7495 23 8 4 chrUextra 4240568 4241495 -24763161 + DMRT1A LINE R1 3342 4271 -912 7 617 2085 263 3 0 chrUextra 4241601 4242202 -24762454 + TOM_I LTR Gypsy 5006 5608 -504 7 617 1073 69 62 6 chrUextra 4242360 4242521 -24762135 - DMTOM1_LTR LTR Gypsy -150 260 91 7 617 3190 191 33 28 chrUextra 4242624 4243506 -24761150 + SAR_DM Satellite Satellite 384 1269 -203 7 617 813 146 0 0 chrUextra 4243403 4243547 -24761109 - ARS406_DM Unknown Unknown -164 189 46 7 617 3135 194 82 14 chrUextra 4243654 4244573 -24760083 - SAR_DM Satellite Satellite -208 1264 284 7 617 3468 187 12 17 chrUextra 4244673 4245599 -24759057 + SAR_DM Satellite Satellite 1 920 -216 7 617 4723 44 29 0 chrUextra 4245699 4246313 -24758343 - BS2 LINE Jockey -1368 3353 2722 7 617 686 277 13 13 chrUextra 4246313 4246617 -24758039 + Copia_I LTR Copia 1976 2279 -2314 7 617 584 53 0 0 chrUextra 4246727 4246802 -24757854 + FW_DM LINE Jockey 1898 1972 -2720 7 617 887 172 32 11 chrUextra 4246800 4246988 -24757668 + FW_DM LINE Jockey 2403 2594 -2098 7 617 4019 128 23 0 chrUextra 4246993 4247651 -24757005 + FW_DM LINE Jockey 3399 4071 -621 7 617 7711 14 0 4 chrUextra 4247751 4248675 -24755981 + FW_DM LINE Jockey 1896 2815 -1877 7 617 7389 20 17 2 chrUextra 4248777 4249703 -24754953 + NINJA_I LTR Pao 4989 5928 -83 7 617 3656 184 14 17 chrUextra 4249803 4250729 -24753927 - SAR_DM Satellite Satellite -443 923 1 7 617 27 73 0 0 chrUextra 4250892 4250947 -24753709 + AT_rich Low_complexity Low_complexity 1 55 0 7 617 1403 68 115 0 chrUextra 4251520 4251755 -24752901 + PROTOP DNA P 452 713 -3767 7 617 1091 27 6 45 chrUextra 4251855 4252011 -24752645 + G5A_DM LINE Jockey 2689 2838 -3 7 617 773 290 108 22 chrUextra 4252037 4252499 -24752157 - Gypsy7_I LTR Gypsy -3317 1667 1166 7 617 1469 33 0 6 chrUextra 4252598 4252781 -24751875 - PROTOP DNA P 0 4480 4299 7 617 520 208 0 0 chrUextra 4252887 4253012 -24751644 - ROVER-I_DM LTR Gypsy -470 6114 5990 7 617 1200 130 0 0 chrUextra 4253047 4253246 -24751410 - ROVER-I_DM LTR Gypsy -1276 5308 5110 7 617 3449 2 0 2 chrUextra 4253246 4253649 -24751007 + STALKER4_LTR LTR Gypsy 1 402 0 7 617 330 25 0 0 chrUextra 4253649 4253676 -24750980 + STALKER4_I LTR Gypsy 1 27 -6503 7 617 289 96 0 37 chrUextra 4253676 4253730 -24750926 + Stalker2_I LTR Gypsy 1 52 -7350 7 617 624 117 0 9 chrUextra 4253907 4254019 -24750637 - ARS406_DM Unknown Unknown -242 111 1 7 617 3602 189 7 10 chrUextra 4253925 4254810 -24749846 + SAR_DM Satellite Satellite 195 1076 -396 7 617 4544 33 58 1 chrUextra 4254933 4255859 -24748797 + MAX_I LTR Pao 2769 3747 -4167 7 617 1557 40 0 0 chrUextra 4255959 4256158 -24748498 - QUASIMODO_I LTR Gypsy -3578 2482 2284 7 617 5497 39 1 6 chrUextra 4256161 4256885 -24747771 - QUASIMODO_I LTR Gypsy -3933 2127 1407 7 617 2802 9 3 28 chrUextra 4256985 4257342 -24747314 - ROVER-LTR_DM LTR Gypsy -19 348 1 7 617 4681 9 2 0 chrUextra 4257354 4257911 -24746745 + QUASIMODO_LTR LTR Gypsy 1 558 -100 7 617 368 254 39 50 chrUextra 4258195 4258377 -24746279 + Gypsy12_LTR LTR Gypsy 899 1078 -1258 7 617 952 171 29 10 chrUextra 4258395 4258602 -24746054 + Gypsy12_LTR LTR Gypsy 1164 1374 -962 7 617 328 211 34 34 chrUextra 4258676 4258823 -24745833 + Gypsy12_LTR LTR Gypsy 1581 1727 -553 7 617 280 137 0 19 chrUextra 4258852 4258904 -24745752 + Gypsy12_LTR LTR Gypsy 2286 2336 0 7 617 3221 14 142 0 chrUextra 4259038 4259961 -24744695 - DMRT1B LINE R1 -2285 2898 1845 7 617 7831 4 0 2 chrUextra 4260061 4260986 -24743670 + TART LINE telomeric 12021 12943 -1534 7 617 376 121 0 0 chrUextra 4261092 4261150 -24743506 - HETRP_DM Satellite Satellite -286 1586 1529 7 617 679 199 0 7 chrUextra 4261319 4261461 -24743195 - HETRP_DM Satellite Satellite -203 1669 1529 7 617 626 200 7 14 chrUextra 4261603 4261745 -24742911 - HETRP_DM Satellite Satellite -203 1669 1529 7 617 249 240 20 30 chrUextra 4261912 4262011 -24742645 - HETRP_DM Satellite Satellite -203 1669 1572 7 617 5593 21 3 0 chrUextra 4262111 4262792 -24741864 - FW_DM LINE Jockey -1577 3115 2433 7 617 1994 20 0 4 chrUextra 4262791 4263036 -24741620 - FW_DM LINE Jockey -2561 2131 1888 7 617 2784 9 0 0 chrUextra 4263136 4263468 -24741188 + R1_DM LINE R1 3951 4282 -1074 7 617 4693 19 2 7 chrUextra 4263488 4264061 -24740595 + R1_DM LINE R1 4407 4976 -380 7 617 3574 199 20 20 chrUextra 4264164 4265086 -24739570 + SAR_DM Satellite Satellite 1 922 -208 7 617 1284 43 0 0 chrUextra 4265186 4265349 -24739307 - CIRCE LINE Composite -766 5590 5428 7 617 2532 79 67 35 chrUextra 4265429 4265862 -24738794 - CIRCE LINE Composite -929 5427 4981 7 617 4367 0 2 0 chrUextra 4266211 4266709 -24737947 + LSU-rRNA_Dme rRNA rRNA 3268 3766 -134 7 617 3560 0 0 2 chrUextra 4266709 4267136 -24737520 - POGO DNA Pogo 0 2121 1696 7 617 2147 4 0 8 chrUextra 4267236 4267496 -24737160 + BATUMI_I LTR Pao 7706 7963 0 7 617 1973 39 3 40 chrUextra 4267496 4267790 -24736866 + BATUMI_I LTR Pao 7002 7284 -679 7 617 1982 118 67 19 chrUextra 4268277 4268693 -24735963 - STALKER4_I LTR Gypsy -5531 999 564 7 617 4183 8 0 0 chrUextra 4268696 4269186 -24735470 - STALKER4_I LTR Gypsy -2559 3971 3482 7 617 4307 0 0 0 chrUextra 4270311 4270811 -24733845 + TAHRE LINE telomeric 9964 10463 0 7 617 889 158 68 73 chrUextra 4270810 4271236 -24733420 + HETA LINE telomeric 1 607 -5474 7 617 5860 6 1 1 chrUextra 4272362 4273045 -24731611 - R2_DM LINE R2 -2920 687 5 7 617 2113 4 0 0 chrUextra 4273042 4273286 -24731370 - LSU-rRNA_Dme rRNA rRNA -1369 2531 2288 7 617 1812 45 4 0 chrUextra 4273396 4273638 -24731018 - G5_DM LINE Jockey -12 4844 4602 7 617 2715 56 53 0 chrUextra 4273635 4274011 -24730645 - G5_DM LINE Jockey -489 4367 3972 7 617 21 0 0 0 chrUextra 4274042 4274063 -24730593 + AT_rich Low_complexity Low_complexity 1 21 0 7 617 7995 1 0 0 chrUextra 4274411 4275336 -24729320 - TABOR_I LTR Gypsy -1659 4677 3753 7 617 2959 174 6 11 chrUextra 4275441 4276361 -24728295 + SAR_DM Satellite Satellite 1 916 -562 7 617 8021 1 0 2 chrUextra 4276461 4277386 -24727270 - LSU-rRNA_Dme rRNA rRNA -954 2946 2024 7 617 29 47 0 0 chrUextra 4277520 4277563 -24727093 + AT_rich Low_complexity Low_complexity 1 43 0 7 617 21 89 0 0 chrUextra 4277601 4277657 -24726999 + AT_rich Low_complexity Low_complexity 1 56 0 7 617 743 295 41 55 chrUextra 4278540 4278956 -24725700 + Gypsy12_I LTR Gypsy 3823 4232 -1314 7 617 6749 27 5 16 chrUextra 4278613 4279435 -24725221 + CIRCE LINE Composite 1884 2696 -3660 7 617 1906 0 0 0 chrUextra 4279535 4279761 -24724895 + ROO_I LTR Pao 8031 8256 0 7 617 3893 5 0 0 chrUextra 4279761 4280189 -24724467 + ROO_LTR LTR Pao 1 428 0 7 617 226 0 0 0 chrUextra 4280189 4280220 -24724436 + NTS_DM Other Other 103 133 -107 7 617 1304 18 0 6 chrUextra 4280220 4280385 -24724271 + NTS_DM Other Other 38 201 -39 7 617 2533 0 0 4 chrUextra 4280559 4280838 -24723818 - ROO_LTR LTR Pao -150 278 1 7 617 3153 143 16 56 chrUextra 4280838 4281483 -24723173 + TART LINE telomeric 9615 10233 -4244 7 617 2610 100 30 13 chrUextra 4281583 4282507 -24722149 + DMSAT6 Satellite Satellite 1 939 -147 7 617 3555 189 28 13 chrUextra 4282612 4283530 -24721126 - SAR_DM Satellite Satellite -1049 931 1 7 617 7527 17 14 7 chrUextra 4283631 4284555 -24720101 + MDG3_I LTR Gypsy 2154 3084 -1902 7 617 1289 56 6 0 chrUextra 4284657 4284836 -24719820 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 7 617 198 150 0 0 chrUextra 4284836 4284876 -24719780 + (AGATG)n Simple_repeat Simple_repeat 2 41 0 7 617 1317 61 0 0 chrUextra 4284876 4285056 -24719600 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 7 617 472 35 0 0 chrUextra 4285679 4285736 -24718920 + ARS406_DM Unknown Unknown 133 189 -164 7 617 3887 183 14 19 chrUextra 4285686 4286582 -24718074 - SAR_DM Satellite Satellite -255 1217 326 7 617 3521 209 24 11 chrUextra 4286704 4287619 -24717037 + SAR_DM Satellite Satellite 246 1172 -300 7 617 3607 7 0 5 chrUextra 4287727 4288146 -24716510 + Stalker2_LTR LTR Gypsy 8 424 0 7 617 4568 2 2 0 chrUextra 4288146 4288651 -24716005 + DMRT1A LINE R1 3433 3938 -1245 7 617 5234 21 165 0 chrUextra 4288751 4289675 -24714981 + ROO_I LTR Pao 1501 2577 -5679 7 617 2397 107 28 49 chrUextra 4289775 4290699 -24713957 + DMSAT6 Satellite Satellite 1 904 -7 7 617 3971 4 0 9 chrUextra 4290799 4291251 -24713405 + GTWIN_LTR LTR Gypsy 48 495 0 7 617 1976 81 98 0 chrUextra 4291893 4292189 -24712467 + DNAREP1_DM LINE Penelope 261 585 -9 7 617 1244 133 226 13 chrUextra 4292442 4292747 -24711909 + DNAREP1_DM LINE Penelope 1 370 -224 7 617 8110 4 9 0 chrUextra 4292847 4293771 -24710885 + ROO_I LTR Pao 6304 7235 -1021 7 617 7977 24 1 0 chrUextra 4293871 4294795 -24709861 + R1_DM LINE R1 1525 2449 -2907 7 617 3889 224 18 22 chrUextra 4294903 4296841 -24707815 + SAR_DM Satellite Satellite 1 1931 -396 7 617 6497 50 43 5 chrUextra 4296943 4297862 -24706794 - DOC2_DM LINE Jockey -3177 1616 619 7 617 1285 189 134 57 chrUextra 4297967 4298354 -24706302 - TAHRE LINE telomeric -2823 7640 7224 7 617 3697 80 2 30 chrUextra 4298360 4298891 -24705765 - HETA LINE telomeric 0 6081 5566 7 617 3957 183 14 20 chrUextra 4298991 4299915 -24704741 + SAR_DM Satellite Satellite 1 918 -225 7 617 1547 6 0 6 chrUextra 4300016 4300197 -24704459 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 7 617 1547 13 0 4 chrUextra 4300231 4300462 -24704194 + (ATCG)n Simple_repeat Simple_repeat 1 230 0 7 617 1272 11 35 0 chrUextra 4300469 4300643 -24704013 + (CGATA)n Simple_repeat Simple_repeat 1 180 0 7 617 858 36 0 0 chrUextra 4300643 4300753 -24703903 + (CATA)n Simple_repeat Simple_repeat 1 110 0 7 617 1328 22 0 22 chrUextra 4300753 4300937 -24703719 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 7 617 3454 93 80 31 chrUextra 4301039 4301652 -24703004 - Gypsy12_I LTR Gypsy -4845 701 1 7 617 337 218 34 34 chrUextra 4301666 4301813 -24702843 - Gypsy12A_LTR LTR Gypsy -553 1727 1581 7 617 285 185 37 0 chrUextra 4301864 4301945 -24702711 - Gypsy12_LTR LTR Gypsy -827 1509 1426 7 617 508 122 100 0 chrUextra 4302392 4302482 -24702174 + DNAREP1_DM LINE Penelope 496 594 0 7 617 26 50 0 0 chrUextra 4302534 4302574 -24702082 + AT_rich Low_complexity Low_complexity 1 40 0 7 617 3750 186 18 20 chrUextra 4303095 4303996 -24700660 - SAR_DM Satellite Satellite -203 1269 371 7 617 747 158 0 4 chrUextra 4304117 4304357 -24700299 - SAR_DM Satellite Satellite -800 238 1 7 617 2459 181 9 17 chrUextra 4304368 4304906 -24699750 - SAR_DM Satellite Satellite -396 1076 543 7 617 484 229 0 0 chrUextra 4304917 4305035 -24699621 - SAR_DM Satellite Satellite -396 1076 959 7 617 2640 93 53 17 chrUextra 4305135 4306059 -24698597 - DMSAT6 Satellite Satellite -84 956 1 7 617 3716 176 42 21 chrUextra 4306171 4307054 -24697602 + SAR_DM Satellite Satellite 369 1269 -203 7 617 967 69 0 0 chrUextra 4306951 4307082 -24697574 - ARS406_DM Unknown Unknown -164 189 59 7 617 1907 45 4 0 chrUextra 4307182 4307424 -24697232 + QUASIMODO_I LTR Gypsy 1887 2129 -3931 7 617 2675 37 0 0 chrUextra 4307425 4307752 -24696904 + QUASIMODO_I LTR Gypsy 2284 2610 -3450 7 617 1912 30 0 0 chrUextra 4307763 4307997 -24696659 + QUASIMODO_I LTR Gypsy 2669 2902 -3158 7 617 762 79 9 0 chrUextra 4307991 4308105 -24696551 + QUASIMODO_I LTR Gypsy 3168 3282 -2778 7 617 610 176 81 51 chrUextra 4308780 4308977 -24695679 + DMCR1A LINE CR1 4227 4429 -41 7 617 1145 14 7 14 chrUextra 4308984 4309128 -24695528 - Gypsy12_LTR LTR Gypsy -1400 936 794 7 617 8308 12 0 0 chrUextra 4309228 4310151 -24694505 - Gypsy6_I LTR Gypsy -625 6387 5465 7 617 1295 45 0 0 chrUextra 4310251 4310408 -24694248 - IDEFIX_LTR LTR Gypsy -95 499 343 7 617 5400 80 0 1 chrUextra 4310402 4311174 -24693482 - IDEFIX_I LTR Gypsy -334 5294 4524 7 617 460 332 39 46 chrUextra 4311738 4312143 -24692513 - Gypsy6_I LTR Gypsy -5228 1784 1437 7 617 1841 127 237 2 chrUextra 4312297 4312892 -24691764 + DMRT1B LINE R1 4107 4843 -340 7 617 24 0 0 0 chrUextra 4313194 4313218 -24691438 + AT_rich Low_complexity Low_complexity 1 24 0 7 617 2975 6 0 0 chrUextra 4313320 4313647 -24691009 + ROO_LTR LTR Pao 98 424 -4 7 617 1620 11 8 3 chrUextra 4313647 4314008 -24690648 + (TATAA)n Simple_repeat Simple_repeat 1 362 0 7 617 1805 49 0 0 chrUextra 4314017 4314243 -24690413 - DM1731_LTR LTR Copia -10 326 101 7 617 488 227 23 0 chrUextra 4314343 4314471 -24690185 + Gypsy12_LTR LTR Gypsy 1774 1904 -432 7 617 30 0 0 0 chrUextra 4314471 4314501 -24690155 + AT_rich Low_complexity Low_complexity 1 30 0 7 617 4085 49 17 2 chrUextra 4314527 4315054 -24689602 - DIVER2_I LTR Pao -1196 2951 2417 7 617 2117 178 11 14 chrUextra 4315372 4316286 -24688370 - SAR_DM Satellite Satellite -514 911 1 7 617 22 35 0 0 chrUextra 4316502 4316531 -24688125 + AT_rich Low_complexity Low_complexity 1 29 0 7 617 21 82 0 0 chrUextra 4316654 4316703 -24687953 + AT_rich Low_complexity Low_complexity 1 49 0 7 617 289 312 24 93 chrUextra 4316798 4317045 -24687611 + ACCORD2_I LTR Gypsy 526 755 -6457 7 617 611 199 15 0 chrUextra 4317069 4317187 -24687469 + ZAM_I LTR Gypsy 528 647 -6843 7 617 869 47 0 0 chrUextra 4317187 4317293 -24687363 + DMTOM1_LTR LTR Gypsy 1 106 -304 7 617 2606 113 25 21 chrUextra 4317412 4318335 -24686321 + DMSAT6 Satellite Satellite 1 926 -15 7 617 690 311 45 72 chrUextra 4318565 4319207 -24685449 + HMSBEAGLE_I LTR Gypsy 2322 2946 -3583 7 617 226 139 0 0 chrUextra 4320090 4320126 -24684530 + DNAREP1_DM LINE Penelope 196 231 -363 7 617 624 110 28 0 chrUextra 4320142 4320251 -24684405 - PROTOP_B DNA P -841 312 201 7 617 4306 10 8 0 chrUextra 4320481 4320968 -24683688 - FW_DM LINE Jockey -509 4183 3693 7 617 1693 35 12 87 chrUextra 4320959 4321213 -24683443 - Gypsy6_I LTR Gypsy -6460 552 318 7 617 1207 0 0 0 chrUextra 4321271 4321404 -24683252 - FW_DM LINE Jockey -923 3769 3637 7 617 35 0 0 0 chrUextra 4321506 4321541 -24683115 + AT_rich Low_complexity Low_complexity 1 35 0 7 617 24 32 0 0 chrUextra 4321620 4321651 -24683005 + AT_rich Low_complexity Low_complexity 1 31 0 7 617 3804 181 17 22 chrUextra 4322527 4323450 -24681206 + SAR_DM Satellite Satellite 1 917 -203 7 617 976 218 82 0 chrUextra 4323569 4323825 -24680831 - Invader3_I LTR Gypsy -2906 1982 1706 7 617 665 87 47 37 chrUextra 4323825 4323932 -24680724 - PROTOP_B DNA P 0 1153 1046 7 617 240 94 0 0 chrUextra 4323933 4323965 -24680691 - Invader3_I LTR Gypsy -3417 1471 1440 7 617 1907 226 105 10 chrUextra 4323969 4324465 -24680191 - Invader3_I LTR Gypsy -4043 845 303 7 617 226 155 80 45 chrUextra 4324573 4324661 -24679995 - HETA LINE telomeric -5990 91 1 7 617 921 58 0 8 chrUextra 4324730 4324852 -24679804 - TART LINE telomeric -3818 10659 10539 7 617 4064 13 2 0 chrUextra 4324852 4325320 -24679336 - PROTOP_A DNA P 0 1105 637 7 77 1459 17 6 6 chrUextra 4325315 4325495 -24679161 - PROTOP_B DNA P -623 530 351 7 618 3624 194 13 16 chrUextra 4325596 4326518 -24678138 - SAR_DM Satellite Satellite -467 919 1 7 618 7793 12 1 1 chrUextra 4326620 4327542 -24677114 - STALKER4_I LTR Gypsy -2767 3763 2842 7 618 1554 15 0 0 chrUextra 4327642 4327917 -24676739 + (TATAA)n Simple_repeat Simple_repeat 1 275 0 7 618 3345 101 19 10 chrUextra 4327922 4328466 -24676190 - G2_DM LINE Jockey -197 2905 2485 7 618 792 41 10 0 chrUextra 4328459 4328557 -24676099 - G2_DM LINE Jockey -976 2126 2028 7 618 5176 10 9 0 chrUextra 4328668 4329252 -24675404 - Copia2_I LTR Copia -1703 2459 1871 7 618 1950 4 100 0 chrUextra 4329688 4329928 -24674728 - Copia_I LTR Copia -4329 264 1 7 618 239 0 0 0 chrUextra 4329928 4329962 -24674694 - Copia_LTR LTR Copia 0 276 243 7 618 2377 4 0 0 chrUextra 4329962 4330238 -24674418 - Copia_LTR LTR Copia 0 276 1 7 618 1324 43 26 31 chrUextra 4330247 4330440 -24674216 - PROTOP DNA P -3883 597 406 7 618 423 100 0 0 chrUextra 4330456 4330526 -24674130 + (TAA)n Simple_repeat Simple_repeat 3 72 0 7 618 760 0 0 0 chrUextra 4330526 4330611 -24674045 + MDG1_LTR LTR Gypsy 87 171 -271 7 618 731 158 48 38 chrUextra 4330711 4330921 -24673735 + Stalker2_I LTR Gypsy 682 893 -6509 7 618 241 252 48 19 chrUextra 4331528 4331633 -24673023 + MDG1_I LTR Gypsy 1748 1855 -4741 7 618 8047 4 12 0 chrUextra 4331739 4332657 -24671999 + STALKER4_I LTR Gypsy 4308 5236 -1294 7 618 896 0 9 9 chrUextra 4332761 4332866 -24671790 + STALKER4_LTR LTR Gypsy 298 402 0 7 618 345 25 0 0 chrUextra 4332866 4332893 -24671763 + STALKER4_I LTR Gypsy 1 27 -6503 7 618 306 105 0 50 chrUextra 4332893 4332953 -24671703 + Stalker2_I LTR Gypsy 1 57 -7345 7 618 410 154 173 0 chrUextra 4333121 4333225 -24671431 + Stalker2_I LTR Gypsy 242 363 -7039 7 618 1979 115 99 40 chrUextra 4333225 4333679 -24670977 + STALKER4_I LTR Gypsy 732 1212 -5318 7 618 1621 42 5 31 chrUextra 4333779 4334003 -24670653 + BATUMI_I LTR Pao 7066 7283 -680 7 618 1205 24 12 12 chrUextra 4334003 4334170 -24670486 + (TTATA)n Simple_repeat Simple_repeat 5 171 0 7 618 3078 14 3 24 chrUextra 4334174 4334549 -24670107 - ROVER-LTR_DM LTR Gypsy 0 367 1 7 618 1327 13 0 0 chrUextra 4334549 4334701 -24669955 - ROVER-I_DM LTR Gypsy 0 6584 6433 7 618 3654 0 0 0 chrUextra 4334801 4335199 -24669457 + TABOR_LTR LTR Gypsy 109 506 0 7 618 3804 9 0 18 chrUextra 4335199 4335653 -24669003 - DMRT1B LINE R1 -1978 3205 2760 7 618 588 14 0 0 chrUextra 4335654 4335723 -24668933 + (TTGTG)n Simple_repeat Simple_repeat 4 72 0 7 618 5900 62 70 18 chrUextra 4335858 4336745 -24667911 + PROTOP_B DNA P 1 933 -220 7 618 263 125 21 0 chrUextra 4337122 4337170 -24667486 + DNAREP1_DM LINE Penelope 288 336 -258 7 618 277 318 21 21 chrUextra 4337611 4337757 -24666899 + BURDOCK_I LTR Gypsy 865 997 -4863 7 618 3561 186 41 25 chrUextra 4337867 4338787 -24665869 + SAR_DM Satellite Satellite 296 1230 -242 7 618 3627 194 22 17 chrUextra 4338889 4339809 -24664847 - SAR_DM Satellite Satellite -444 924 1 7 618 3458 183 19 63 chrUextra 4339911 4340828 -24663828 + SAR_DM Satellite Satellite 201 1076 -396 7 618 4764 17 3 38 chrUextra 4340933 4341533 -24663123 + G_DM LINE Jockey 3768 4346 0 7 618 2646 46 12 0 chrUextra 4341528 4341855 -24662801 + FW_DM LINE Jockey 321 651 -4041 7 618 58 15 0 0 chrUextra 4342449 4342514 -24662142 + AT_rich Low_complexity Low_complexity 1 65 0 7 618 538 148 5 260 chrUextra 4342998 4343190 -24661466 + HOBO DNA hAT 131 273 -2743 7 618 1878 104 172 28 chrUextra 4343195 4343585 -24661071 + PROTOP_B DNA P 33 478 -675 7 618 2402 81 0 6 chrUextra 4343562 4343899 -24660757 + HOBO DNA hAT 330 664 -2352 7 618 3278 5 0 0 chrUextra 4343999 4344372 -24660284 - DOC LINE Jockey -2847 1878 1506 7 618 4117 23 4 69 chrUextra 4344370 4344921 -24659735 - Gypsy12_LTR LTR Gypsy -1226 1110 596 7 618 2162 8 0 0 chrUextra 4345021 4345259 -24659397 + PROTOP_B DNA P 922 1153 0 7 618 3165 21 119 0 chrUextra 4345259 4345771 -24658885 - R1_DM LINE R1 -2810 2546 1974 7 618 1468 29 0 0 chrUextra 4345771 4345943 -24658713 - R1_DM LINE R1 -3577 1779 1608 7 618 2893 3 94 0 chrUextra 4346043 4346424 -24658232 + LSU-rRNA_Dme rRNA rRNA 2233 2649 -1251 7 618 2857 9 0 0 chrUextra 4346426 4346744 -24657912 + R1_DM LINE R1 5039 5356 0 7 618 1960 5 0 0 chrUextra 4346750 4346965 -24657691 + LSU-rRNA_Dme rRNA rRNA 2640 2854 -1046 7 618 3390 223 22 16 chrUextra 4347065 4347982 -24656674 + SAR_DM Satellite Satellite 1 922 -203 7 618 8028 14 8 0 chrUextra 4348087 4349009 -24655647 + Copia2_I LTR Copia 919 1847 -2315 7 618 3739 191 9 16 chrUextra 4349119 4350007 -24654649 - SAR_DM Satellite Satellite -396 1076 195 7 618 722 85 0 25 chrUextra 4349911 4350031 -24654625 + ARS406_DM Unknown Unknown 1 117 -236 7 618 5611 92 81 10 chrUextra 4350131 4351001 -24653655 + Invader1_I LTR Gypsy 2207 3137 -49 7 618 3626 191 22 21 chrUextra 4351153 4352043 -24652613 + SAR_DM Satellite Satellite 374 1264 -208 7 618 232 62 0 0 chrUextra 4352043 4352075 -24652581 - ARS406_DM Unknown Unknown -195 158 127 7 618 1951 9 0 4 chrUextra 4352175 4352401 -24652255 + QUASIMODO_LTR LTR Gypsy 434 658 0 7 618 5845 3 10 33 chrUextra 4352401 4353097 -24651559 + QUASIMODO_I LTR Gypsy 1 680 -5380 7 618 8341 4 0 0 chrUextra 4353197 4354119 -24650537 + TART LINE telomeric 6323 7244 -7233 7 618 7626 38 7 1 chrUextra 4354219 4355141 -24649515 - R1_DM LINE R1 -1602 3754 2828 7 618 7551 26 17 0 chrUextra 4355241 4356163 -24648493 + PROTOP_A DNA P 86 1023 -82 7 618 34 24 0 0 chrUextra 4356787 4356828 -24647828 + AT_rich Low_complexity Low_complexity 1 41 0 7 618 21 95 0 0 chrUextra 4357041 4357104 -24647552 + AT_rich Low_complexity Low_complexity 1 63 0 7 618 615 0 0 0 chrUextra 4357116 4357184 -24647472 + LSU-rRNA_Dme rRNA rRNA 1 68 -3832 7 618 222 151 13 27 chrUextra 4358418 4358493 -24646163 + (TAAA)n Simple_repeat Simple_repeat 4 77 0 7 618 3538 5 0 0 chrUextra 4358813 4359226 -24645430 + IDEFIX_I LTR Gypsy 4266 4678 -950 7 618 3734 194 31 21 chrUextra 4359327 4360244 -24644412 + SAR_DM Satellite Satellite 1 925 -255 7 618 2306 15 0 0 chrUextra 4360347 4360615 -24644041 + QUASIMODO_I LTR Gypsy 1282 1549 -4511 7 618 5654 6 0 5 chrUextra 4360615 4361268 -24643388 + QUASIMODO_I LTR Gypsy 1883 2532 -3528 7 618 5170 25 0 0 chrUextra 4361368 4361967 -24642689 - R1_DM LINE R1 -2481 2875 2277 7 618 454 0 0 0 chrUextra 4361967 4362017 -24642639 + CIRCE LINE Composite 4931 4980 -1376 7 618 883 314 25 19 chrUextra 4362615 4363106 -24641550 + Gypsy4_I LTR Gypsy 2024 2689 -3599 7 618 646 23 23 0 chrUextra 4363035 4363122 -24641534 + TLD2 Unknown Unknown 1 89 -129 7 618 315 281 20 40 chrUextra 4363107 4363259 -24641397 + DM297_I LTR Gypsy 2878 2991 -3176 7 618 644 227 6 31 chrUextra 4363414 4363573 -24641083 + HETRP_DM Satellite Satellite 1521 1675 -197 7 618 651 193 7 15 chrUextra 4363706 4363843 -24640813 + HETRP_DM Satellite Satellite 1529 1664 -208 7 618 661 205 12 49 chrUextra 4363965 4364129 -24640527 + HETRP_DM Satellite Satellite 1518 1675 -197 7 618 309 114 0 0 chrUextra 4364287 4364331 -24640325 + HETRP_DM Satellite Satellite 1529 1572 -300 7 618 3904 231 10 9 chrUextra 4364440 4365352 -24639304 + TABOR_I LTR Gypsy 3722 4634 -1702 7 618 5088 3 44 0 chrUextra 4365455 4366373 -24638283 - DOC LINE Jockey -844 3881 2924 7 618 1384 107 25 14 chrUextra 4366475 4366764 -24637892 + Gypsy2_I LTR Gypsy 5877 6126 -9 7 618 3183 11 0 0 chrUextra 4366765 4367118 -24637538 + Gypsy2_LTR LTR Gypsy 1 353 0 7 618 358 347 17 23 chrUextra 4367215 4367392 -24637264 + NOMAD_I LTR Gypsy 6053 6228 -344 7 618 4487 90 14 100 chrUextra 4367515 4368415 -24636241 + ROO_I LTR Pao 114 936 -7320 7 618 1566 17 2 2 chrUextra 4368515 4369057 -24635599 + (TTATA)n Simple_repeat Simple_repeat 1 542 0 7 618 3215 3 3 3 chrUextra 4369068 4369436 -24635220 + DM176_LTR LTR Gypsy 1 368 -139 7 618 7517 34 57 0 chrUextra 4369536 4370457 -24634199 - R1_DM LINE R1 -2718 2638 1666 7 618 622 171 81 51 chrUextra 4372297 4372494 -24632162 + DMCR1A LINE CR1 4227 4429 -41 7 618 7895 14 31 0 chrUextra 4372599 4373520 -24631136 - Copia2_I LTR Copia -2460 1702 753 7 618 2224 65 29 0 chrUextra 4373620 4373926 -24630730 - QUASIMODO_I LTR Gypsy -5716 344 30 7 618 2241 98 40 32 chrUextra 4373933 4374314 -24630342 - QUASIMODO_LTR LTR Gypsy -51 607 91 7 618 265 203 0 0 chrUextra 4374469 4374528 -24630128 - TIRANT_I LTR Gypsy -660 7032 6974 7 618 252 152 87 43 chrUextra 4374645 4374714 -24629942 - DM176_LTR LTR Gypsy -141 366 295 7 618 272 140 20 20 chrUextra 4374823 4374874 -24629782 - DM176_LTR LTR Gypsy -238 269 219 7 618 3945 19 0 65 chrUextra 4374981 4375490 -24629166 + MICROPIA_LTR LTR Gypsy 1 476 0 7 618 620 0 0 14 chrUextra 4375490 4375562 -24629094 + MICROPIA_I LTR Gypsy 1 71 -4405 7 618 299 162 104 24 chrUextra 4376115 4376279 -24628377 + (TCTA)n Simple_repeat Simple_repeat 2 178 0 7 618 232 164 68 83 chrUextra 4376212 4376345 -24628311 + (TCTTG)n Simple_repeat Simple_repeat 3 133 0 7 618 319 141 135 0 chrUextra 4376338 4376494 -24628162 + (TCTA)n Simple_repeat Simple_repeat 4 180 0 7 618 8154 0 0 1 chrUextra 4376683 4377604 -24627052 - ROO_I LTR Pao -2865 5391 4472 7 618 22 56 0 0 chrUextra 4378017 4378053 -24626603 + AT_rich Low_complexity Low_complexity 1 36 0 7 618 3483 22 10 2 chrUextra 4378207 4378622 -24626034 - PROTOP_A DNA P 0 1105 688 7 618 7860 25 1 1 chrUextra 4378725 4379646 -24625010 - R1_DM LINE R1 -2401 2955 2035 7 618 2442 171 12 8 chrUextra 4379747 4380254 -24624402 - SAR_DM Satellite Satellite -549 923 415 7 618 3484 19 0 0 chrUextra 4380254 4380667 -24623989 - MDG1_LTR LTR Gypsy 0 442 30 7 618 284 167 64 0 chrUextra 4381253 4381331 -24623325 + CT-rich Low_complexity Low_complexity 4 86 0 7 618 3520 21 180 2 chrUextra 4381788 4382320 -24622336 - DOC2_DM LINE Jockey -2601 2192 1566 7 618 2784 34 80 0 chrUextra 4382356 4382708 -24621948 - DMCR1A LINE CR1 0 4470 4091 7 618 1432 80 10 0 chrUextra 4382808 4383007 -24621649 - R1_DM LINE R1 -5155 201 1 7 618 940 53 0 0 chrUextra 4383040 4383154 -24621502 - R1_DM LINE R1 0 5356 5243 7 618 2052 17 4 0 chrUextra 4383151 4383387 -24621269 - R1_DM LINE R1 -290 5066 4830 7 618 2613 16 70 0 chrUextra 4383387 4383588 -24621068 + Stalker3_LTR LTR Gypsy 1 201 -171 7 618 207 0 0 0 chrUextra 4383588 4383611 -24621045 + (ATAAG)n Simple_repeat Simple_repeat 2 24 0 7 618 2613 16 70 0 chrUextra 4383611 4383724 -24620932 + Stalker3_LTR LTR Gypsy 202 335 -37 7 618 3624 215 21 12 chrUextra 4383828 4384747 -24619909 - SAR_DM Satellite Satellite -397 926 1 7 618 458 196 11 0 chrUextra 4384848 4384940 -24619716 - NTS_DM Other Other -147 93 1 7 618 295 106 21 0 chrUextra 4385031 4385078 -24619578 - NTS_DM Other Other -192 48 1 7 618 458 127 53 38 chrUextra 4385078 4385209 -24619447 - NTS_DM Other Other 0 240 108 7 618 817 132 7 0 chrUextra 4385217 4385353 -24619303 - NTS_DM Other Other -103 137 1 7 618 234 167 21 0 chrUextra 4385444 4385492 -24619164 - NTS_DM Other Other -191 49 1 7 618 1088 138 35 22 chrUextra 4385492 4385722 -24618934 - NTS_DM Other Other 0 240 8 7 618 369 95 0 0 chrUextra 4385868 4385931 -24618725 + (AATAG)n Simple_repeat Simple_repeat 2 64 0 7 618 1304 76 26 14 chrUextra 4385944 4386292 -24618364 + (AATAG)n Simple_repeat Simple_repeat 1 351 0 7 618 1346 81 10 4 chrUextra 4386307 4386788 -24617868 + (AATAG)n Simple_repeat Simple_repeat 1 484 0 7 618 8175 2 0 2 chrUextra 4387908 4388828 -24615828 - G_DM LINE Jockey -1249 3097 2180 7 618 7553 25 1 0 chrUextra 4388928 4389848 -24614808 + R1_DM LINE R1 3929 4849 -507 7 618 22 88 0 0 chrUextra 4390236 4390293 -24614363 + AT_rich Low_complexity Low_complexity 1 57 0 7 618 30 59 0 0 chrUextra 4390331 4390382 -24614274 + AT_rich Low_complexity Low_complexity 1 51 0 7 618 26 30 0 0 chrUextra 4390428 4390461 -24614195 + AT_rich Low_complexity Low_complexity 1 33 0 7 618 1910 52 15 0 chrUextra 4390596 4390867 -24613789 - PROTOP_A DNA P -592 513 239 7 618 3510 194 22 21 chrUextra 4390968 4391888 -24612768 + SAR_DM Satellite Satellite 293 1213 -259 7 618 6722 44 24 2 chrUextra 4393008 4393928 -24610728 - LSU-rRNA_Dme rRNA rRNA -2514 1386 447 7 618 903 41 26 26 chrUextra 4394028 4394179 -24610477 + NTS_DM Other Other 90 240 0 7 618 1258 19 0 18 chrUextra 4394179 4394344 -24610312 + NTS_DM Other Other 1 162 -78 7 618 488 119 36 0 chrUextra 4394454 4394538 -24610118 + NTS_DM Other Other 4 90 -150 7 618 28 48 0 0 chrUextra 4394811 4394853 -24609803 + AT_rich Low_complexity Low_complexity 1 42 0 7 618 1580 169 19 92 chrUextra 4395086 4395509 -24609147 - Gypsy3_LTR LTR Gypsy -6 392 1 7 618 1919 196 6 6 chrUextra 4395509 4395967 -24608689 - Gypsy3_I LTR Gypsy 0 6177 5892 7 618 432 116 0 21 chrUextra 4396068 4396219 -24608437 + RSP Satellite Satellite 1 147 -2 7 618 809 119 12 17 chrUextra 4396245 4396980 -24607676 + RSP Satellite Satellite 1 731 0 7 618 816 60 0 0 chrUextra 4397088 4397204 -24607452 + ARS406_DM Unknown Unknown 43 158 -195 7 618 1938 174 5 9 chrUextra 4397211 4398005 -24606651 - SAR_DM Satellite Satellite -569 791 1 7 618 519 90 0 196 chrUextra 4398163 4398301 -24606355 + DNAREP1_DM LINE Penelope 475 585 -9 7 618 21 0 0 0 chrUextra 4398386 4398407 -24606249 + AT_rich Low_complexity Low_complexity 1 21 0 7 618 281 194 40 0 chrUextra 4398502 4398580 -24606076 - PROTOP_A DNA P -981 124 43 7 618 908 70 5 17 chrUextra 4399186 4399584 -24605072 - RSP Satellite Satellite 0 393 1 7 618 2492 87 8 9 chrUextra 4399581 4400040 -24604616 - G6_DM LINE Jockey 0 2042 1739 7 618 1898 177 7 12 chrUextra 4400148 4400577 -24604079 + SAR_DM Satellite Satellite 602 1028 -444 7 618 27 0 0 0 chrUextra 4400577 4400604 -24604052 + AT_rich Low_complexity Low_complexity 1 27 0 7 618 4040 4 0 0 chrUextra 4400604 4401068 -24603588 - BS2 LINE Jockey 0 4721 4258 7 618 1292 285 117 17 chrUextra 4401217 4402005 -24602651 + MICROPIA_I LTR Gypsy 2697 3563 -913 7 618 3236 200 19 23 chrUextra 4402199 4403099 -24601557 - SAR_DM Satellite Satellite -208 1264 369 7 618 2348 111 25 27 chrUextra 4403208 4404103 -24600553 + DMSAT6 Satellite Satellite 1 893 -18 7 618 6424 21 48 14 chrUextra 4404291 4405148 -24599508 + STALKER4_I LTR Gypsy 1057 1942 -4588 7 618 1968 190 24 12 chrUextra 4405253 4406167 -24598489 + SAR_DM Satellite Satellite 1 925 -396 7 618 4471 122 30 65 chrUextra 4406267 4407186 -24597470 + BATUMI_I LTR Pao 3706 4592 -3371 7 618 1395 59 0 3 chrUextra 4407286 4407592 -24597064 + (CTTAT)n Simple_repeat Simple_repeat 1 305 0 7 618 3706 2 0 5 chrUextra 4407592 4408022 -24596634 - ROO_LTR LTR Pao 0 428 1 7 618 1453 6 6 0 chrUextra 4408022 4408205 -24596451 - ROO_I LTR Pao 0 8256 8073 7 618 3500 186 16 24 chrUextra 4408305 4409219 -24595437 - SAR_DM Satellite Satellite -245 1227 321 7 618 380 307 21 23 chrUextra 4409451 4409690 -24594966 + BURDOCK_I LTR Gypsy 842 1079 -5209 7 618 1026 188 24 20 chrUextra 4410352 4411262 -24593394 - SAR_DM Satellite Satellite -396 914 1 7 618 1713 0 0 0 chrUextra 4411362 4411568 -24593088 + DM176_I LTR Gypsy 2152 2357 -4063 7 618 4968 39 9 1 chrUextra 4411568 4412281 -24592375 + DM176_I LTR Gypsy 4473 5283 -1301 7 618 6829 28 55 8 chrUextra 4412381 4413298 -24591358 + ROO_I LTR Pao 4244 5203 -3053 7 618 7477 19 9 4 chrUextra 4413400 4414319 -24590337 - FW_DM LINE Jockey -2099 2593 1671 7 618 7492 25 13 0 chrUextra 4414419 4415338 -24589318 - R1_DM LINE R1 -15 5341 4411 7 618 231 218 38 47 chrUextra 4415971 4416077 -24588579 - Copia_I LTR Copia -81 4512 4408 7 618 21 0 0 0 chrUextra 4416151 4416172 -24588484 + AT_rich Low_complexity Low_complexity 1 21 0 7 618 6705 19 55 22 chrUextra 4416459 4417376 -24587280 + ROO_I LTR Pao 2995 3941 -4315 7 618 3567 15 7 0 chrUextra 4417476 4417932 -24586724 - STALKER4_I LTR Gypsy -4965 1565 1107 7 618 3476 20 73 26 chrUextra 4417930 4418393 -24586263 - CIRCE LINE Composite -3221 3135 2651 7 618 740 30 10 10 chrUextra 4419516 4419616 -24585040 - R1_DM LINE R1 -4154 1202 1103 7 618 4436 69 3 3 chrUextra 4419616 4420227 -24584429 - R1_DM LINE R1 -4745 611 1 7 618 1446 29 0 0 chrUextra 4420260 4420433 -24584223 - R1_DM LINE R1 0 5356 5184 7 618 4235 41 67 4 chrUextra 4420539 4421452 -24583204 - BATUMI_I LTR Pao -1543 6420 5451 7 618 3316 189 33 11 chrUextra 4421552 4422470 -24582186 - SAR_DM Satellite Satellite -684 939 1 7 618 535 308 33 39 chrUextra 4422832 4423486 -24581170 - GTWIN_I LTR Gypsy -2883 3538 2809 7 618 2835 6 0 0 chrUextra 4423590 4423917 -24580739 - SSU-rRNA_Dme rRNA rRNA -1668 327 1 7 618 32 0 0 0 chrUextra 4424049 4424081 -24580575 + AT_rich Low_complexity Low_complexity 1 32 0 7 618 28 48 0 0 chrUextra 4424409 4424451 -24580205 + AT_rich Low_complexity Low_complexity 1 42 0 7 618 3726 6 0 0 chrUextra 4424609 4425091 -24579565 - DM176_I LTR Gypsy -65 6355 5874 7 618 3685 0 0 0 chrUextra 4425087 4425528 -24579128 - DM176_I LTR Gypsy -1631 4789 4349 7 618 3088 50 125 0 chrUextra 4425628 4426173 -24578483 - DMCR1A LINE CR1 -908 3562 2950 7 618 1587 67 3 3 chrUextra 4426170 4426457 -24578199 + ROOA_I LTR Pao 4644 5005 -1844 7 618 219 125 0 0 chrUextra 4426458 4426498 -24578158 + (TA)n Simple_repeat Simple_repeat 1 40 0 7 618 303 22 43 0 chrUextra 4426501 4426547 -24578109 - DMCR1A LINE CR1 -2119 2351 2304 7 618 3057 0 0 0 chrUextra 4426647 4426993 -24577663 - ROO_LTR LTR Pao -82 346 1 7 618 698 0 12 0 chrUextra 4426993 4427078 -24577578 - ROO_I LTR Pao 0 8256 8171 7 618 3112 77 6 2 chrUextra 4427078 4427561 -24577095 + S_DM DNA Tc1 1 485 -1251 7 618 5106 42 14 4 chrUextra 4427669 4428455 -24576201 - STALKER4_I LTR Gypsy -1626 5776 4863 7 618 1161 7 0 7 chrUextra 4428447 4428585 -24576071 - STALKER4_I LTR Gypsy -2290 4240 4104 7 618 3897 27 6 0 chrUextra 4428688 4429169 -24575487 + R1_DM LINE R1 4873 5356 0 7 618 2783 67 62 0 chrUextra 4429202 4429604 -24575052 + R1_DM LINE R1 1 427 -4929 7 618 1402 0 6 0 chrUextra 4429704 4429878 -24574778 + ROO_I LTR Pao 8082 8256 0 7 618 3722 2 0 2 chrUextra 4429878 4430307 -24574349 + ROO_LTR LTR Pao 1 428 0 7 618 1599 16 0 0 chrUextra 4430316 4430623 -24574033 + (TATAA)n Simple_repeat Simple_repeat 1 307 0 7 618 1905 97 24 88 chrUextra 4430724 4431098 -24573558 + TART LINE telomeric 3013 3362 -11115 7 618 1942 164 31 78 chrUextra 4431093 4431640 -24573016 + TART LINE telomeric 3683 4029 -10448 7 618 2254 111 9 38 chrUextra 4431743 4432659 -24571997 - DMSAT6 Satellite Satellite -7 888 1 7 618 1635 115 0 19 chrUextra 4432760 4433018 -24571638 - Gypsy12_I LTR Gypsy -2483 3063 2811 7 618 1599 81 0 0 chrUextra 4433009 4433231 -24571425 - Gypsy12_I LTR Gypsy -2876 2670 2449 7 618 234 50 200 0 chrUextra 4433234 4433274 -24571382 - PROTOP_B DNA P -1105 48 1 7 618 3254 187 14 19 chrUextra 4433779 4434696 -24569960 + SAR_DM Satellite Satellite 1 912 -217 7 618 793 135 0 0 chrUextra 4434899 4435025 -24569631 - HMSBEAGLE_I LTR Gypsy 0 6529 6404 7 618 295 109 0 0 chrUextra 4435124 4435170 -24569486 - HMSBEAGLE_I LTR Gypsy -124 6405 6360 7 618 677 197 72 86 chrUextra 4435433 4435711 -24568945 - HMSBEAGLE_I LTR Gypsy -161 6368 6095 7 618 3387 185 32 20 chrUextra 4435831 4436725 -24567931 + SAR_DM Satellite Satellite 326 1230 -242 7 618 2199 43 0 0 chrUextra 4436832 4437108 -24567548 - R1_DM LINE R1 -3753 1603 1328 7 618 2631 40 3 11 chrUextra 4437105 4437456 -24567200 - R1_DM LINE R1 -4179 1177 830 7 618 2329 55 0 0 chrUextra 4437441 4437750 -24566906 - R1_DM LINE R1 -4744 612 304 7 618 3602 172 18 28 chrUextra 4437851 4438742 -24565914 + SAR_DM Satellite Satellite 237 1118 -354 7 618 362 194 18 27 chrUextra 4438657 4438768 -24565888 - XDMR_DM Unknown Unknown 0 360 251 7 618 524 90 45 0 chrUextra 4439060 4439203 -24565453 + TC1_DM DNA Tc1 1 196 -1470 7 618 4837 0 0 0 chrUextra 4439203 4439761 -24564895 - ACCORD_LTR LTR Gypsy 0 558 1 7 618 738 114 0 0 chrUextra 4439886 4440009 -24564647 - ARS406_DM Unknown Unknown -230 123 1 7 618 3622 184 11 10 chrUextra 4439916 4440797 -24563859 + SAR_DM Satellite Satellite 195 1076 -396 7 618 7569 9 12 7 chrUextra 4440904 4441822 -24562834 - FW_DM LINE Jockey -1934 2758 1836 7 618 1710 31 80 0 chrUextra 4442616 4442840 -24561816 + PROTOP DNA P 1 242 -4238 7 618 3437 24 5 2 chrUextra 4442940 4443361 -24561295 - Gypsy_LTR LTR Gypsy -60 422 1 7 618 4189 12 2 0 chrUextra 4443361 4443857 -24560799 - Gypsy_I LTR Gypsy 0 6507 6011 7 618 7223 16 0 2 chrUextra 4443958 4444874 -24559782 + QUASIMODO_I LTR Gypsy 4293 5206 -854 7 618 3555 199 19 10 chrUextra 4444978 4445892 -24558764 - SAR_DM Satellite Satellite -219 1253 332 7 618 5199 6 2 0 chrUextra 4445994 4446632 -24558024 - QUASIMODO_I LTR Gypsy -1504 4556 3918 7 618 2033 22 4 4 chrUextra 4446642 4446912 -24557744 - QUASIMODO_I LTR Gypsy -2545 3515 3246 7 618 1026 78 20 0 chrUextra 4447012 4447165 -24557491 - R1_DM LINE R1 -5200 156 1 7 618 913 53 0 0 chrUextra 4447198 4447312 -24557344 - R1_DM LINE R1 0 5356 5243 7 618 5124 19 13 0 chrUextra 4447309 4447930 -24556726 - R1_DM LINE R1 -290 5066 4438 7 618 2272 21 144 0 chrUextra 4448030 4448453 -24556203 - R1_DM LINE R1 -2899 2457 1974 7 618 3912 36 10 0 chrUextra 4448453 4448948 -24555708 - R1_DM LINE R1 -3577 1779 1280 7 618 4072 0 8 0 chrUextra 4449048 4449529 -24555127 - QUASIMODO_LTR LTR Gypsy -173 485 1 7 618 53 40 0 0 chrUextra 4449529 4449603 -24555053 + AT_rich Low_complexity Low_complexity 1 74 0 7 618 2673 0 0 12 chrUextra 4450066 4450394 -24554262 + BATUMI_I LTR Pao 7640 7963 0 7 618 2202 25 0 27 chrUextra 4450394 4450685 -24553971 + BATUMI_I LTR Pao 7002 7284 -679 7 618 2516 0 0 0 chrUextra 4450685 4450984 -24553672 - STALKER4_I LTR Gypsy -2856 3674 3376 7 618 188 86 0 28 chrUextra 4451710 4451746 -24552910 + (CAGAA)n Simple_repeat Simple_repeat 4 38 0 7 618 2445 88 42 33 chrUextra 4452106 4453018 -24551638 - DMSAT6 Satellite Satellite -3 920 1 7 618 4475 56 24 106 chrUextra 4453120 4454038 -24550618 - BATUMI_I LTR Pao -6626 1337 495 7 618 892 184 295 65 chrUextra 4454590 4455055 -24549601 - HETA LINE telomeric -371 5710 5139 7 618 3471 189 16 25 chrUextra 4455156 4456074 -24548582 - SAR_DM Satellite Satellite -264 1208 299 7 77 5112 78 34 28 chrUextra 4456174 4457092 -24547564 + STALKER4_I LTR Gypsy 449 1501 -5029 7 619 4265 19 0 0 chrUextra 4457192 4457707 -24546949 + DOC2_DM LINE Jockey 4278 4792 -1 7 619 4680 6 0 0 chrUextra 4458209 4458759 -24545897 - DM176_I LTR Gypsy -879 5541 4992 7 619 3286 0 0 0 chrUextra 4458752 4459126 -24545530 - DM176_I LTR Gypsy -5455 965 592 7 619 6475 52 19 3 chrUextra 4459226 4460143 -24544513 + R1_DM LINE R1 1922 3740 -1616 7 619 2605 0 0 0 chrUextra 4460243 4460549 -24544107 + G_DM LINE Jockey 4038 4343 -3 7 619 235 186 0 0 chrUextra 4460629 4460672 -24543984 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2578 7 619 226 103 25 25 chrUextra 4460813 4460853 -24543803 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 619 2050 0 0 0 chrUextra 4460926 4461160 -24543496 + G_DM LINE Jockey 1 234 -4112 7 619 6421 51 33 11 chrUextra 4461263 4462177 -24542479 + R1_DM LINE R1 301 1234 -4122 7 619 1521 17 0 0 chrUextra 4462774 4462954 -24541702 + (CAAGA)n Simple_repeat Simple_repeat 1 180 0 7 619 234 81 0 0 chrUextra 4462954 4462990 -24541666 + (ACTAG)n Simple_repeat Simple_repeat 4 40 0 7 619 6836 43 20 2 chrUextra 4463294 4464211 -24540445 + R1_DM LINE R1 172 1104 -4252 7 619 3104 231 57 40 chrUextra 4464311 4466245 -24538411 - SAR_DM Satellite Satellite -828 1967 1 7 619 790 0 0 0 chrUextra 4466347 4466438 -24538218 - DM176_I LTR Gypsy -6329 91 1 7 619 4293 8 0 0 chrUextra 4466438 4466945 -24537711 - DM176_LTR LTR Gypsy 0 507 1 7 619 472 58 0 232 chrUextra 4466947 4467059 -24537597 + DNAREP1_DM LINE Penelope 500 585 -9 7 619 21 0 0 0 chrUextra 4467144 4467165 -24537491 + AT_rich Low_complexity Low_complexity 1 21 0 7 619 291 232 0 0 chrUextra 4467872 4467941 -24536715 - BS2 LINE Jockey -507 4214 4146 7 619 22 0 0 0 chrUextra 4468214 4468236 -24536420 + AT_rich Low_complexity Low_complexity 1 22 0 7 619 7555 9 32 1 chrUextra 4468379 4469296 -24535360 + Copia2_I LTR Copia 448 1392 -2770 7 619 7195 45 0 3 chrUextra 4469397 4470313 -24534343 - BATUMI_I LTR Pao -2312 5651 4739 7 619 6970 19 64 1 chrUextra 4470413 4471330 -24533326 + ROO_I LTR Pao 2675 3649 -4607 7 619 3714 182 18 26 chrUextra 4471433 4472346 -24532310 + SAR_DM Satellite Satellite 1 905 -217 7 619 3452 185 17 22 chrUextra 4472450 4473346 -24531310 + SAR_DM Satellite Satellite 282 1172 -300 7 619 406 246 8 0 chrUextra 4473241 4473363 -24531293 - XDMR Unknown Unknown 0 361 239 7 619 2765 60 11 5 chrUextra 4473464 4473846 -24530810 - R1_DM LINE R1 -4972 384 1 7 619 762 43 0 0 chrUextra 4473879 4473973 -24530683 - R1_DM LINE R1 0 5356 5263 7 619 2767 27 110 0 chrUextra 4473972 4474381 -24530275 - R1_DM LINE R1 -301 5055 4602 7 619 3477 0 2 2 chrUextra 4474481 4474895 -24529761 + G2_DM LINE Jockey 2684 3097 -5 7 619 2627 59 57 0 chrUextra 4474891 4475263 -24529393 + PROTOP_A DNA P 713 1105 0 7 619 837 259 23 13 chrUextra 4475501 4475810 -24528846 - XDMR_DM Unknown Unknown -43 317 6 7 619 3407 229 31 37 chrUextra 4475544 4477431 -24527225 + SAR_DM Satellite Satellite 1 1874 -208 7 619 1658 68 26 57 chrUextra 4477531 4477795 -24526861 + Invader2_LTR LTR Gypsy 11 266 0 7 619 651 92 43 135 chrUextra 4477828 4477991 -24526665 + HMSBEAGLE_I LTR Gypsy 6219 6366 -163 7 619 251 105 0 0 chrUextra 4478201 4478239 -24526417 + HMSBEAGLE_I LTR Gypsy 6360 6397 -132 7 619 3531 192 12 17 chrUextra 4478550 4479463 -24525193 + SAR_DM Satellite Satellite 1 909 -208 7 619 597 4 0 136 chrUextra 4480149 4480474 -24524182 + (TTTTTA)n Simple_repeat Simple_repeat 1 280 0 7 619 3340 15 0 0 chrUextra 4480579 4480978 -24523678 - PROTOP_A DNA P -706 399 1 7 619 3194 26 0 2 chrUextra 4480978 4481495 -24523161 - Invader1_I LTR Gypsy -2007 1179 547 7 619 3608 188 12 18 chrUextra 4481595 4482495 -24522161 + SAR_DM Satellite Satellite 224 1118 -354 7 619 350 194 20 10 chrUextra 4482412 4482511 -24522145 - XDMR_DM Unknown Unknown 0 360 261 7 619 6250 46 12 44 chrUextra 4482611 4483527 -24521129 - BATUMI_I LTR Pao -4673 3290 2404 7 619 3520 10 0 0 chrUextra 4483627 4484036 -24520620 - DMRT1B LINE R1 -4774 409 1 7 619 2317 35 3 0 chrUextra 4484252 4484540 -24520116 + R1_DM LINE R1 4594 4882 -474 7 619 245 162 114 15 chrUextra 4484894 4485026 -24519630 + (TAGA)n Simple_repeat Simple_repeat 2 146 0 7 619 269 174 96 30 chrUextra 4485047 4485213 -24519443 + (TAGA)n Simple_repeat Simple_repeat 2 178 0 7 619 558 338 9 9 chrUextra 4485716 4486081 -24518575 - GTWIN_I LTR Gypsy -2883 3538 3119 7 619 347 296 33 28 chrUextra 4486213 4486425 -24518231 - DM176_I LTR Gypsy -3175 3245 3033 7 619 432 45 15 0 chrUextra 4486360 4486426 -24518230 - TLD2 Unknown Unknown 0 218 152 7 619 314 292 23 23 chrUextra 4486427 4486560 -24518096 - GTWIN_I LTR Gypsy -3725 2563 2431 7 619 290 116 26 115 chrUextra 4487001 4487079 -24517577 + TIRANT_I LTR Gypsy 1 71 -7621 7 619 305 190 20 20 chrUextra 4487691 4487793 -24516863 + XDMR_DM Unknown Unknown 259 360 0 7 619 3637 191 8 18 chrUextra 4487707 4488605 -24516051 - SAR_DM Satellite Satellite -354 1118 230 7 619 3477 190 16 18 chrUextra 4488728 4489622 -24515034 + SAR_DM Satellite Satellite 326 1217 -255 7 619 1257 7 0 0 chrUextra 4489723 4489875 -24514781 - Copia_I LTR Copia -4441 152 1 7 619 2297 0 0 0 chrUextra 4489875 4490151 -24514505 - Copia_LTR LTR Copia 0 276 1 7 619 244 128 0 21 chrUextra 4490259 4490307 -24514349 - HMSBEAGLE_I LTR Gypsy -6308 221 175 7 619 244 128 0 21 chrUextra 4490533 4490581 -24514075 - HMSBEAGLE_I LTR Gypsy -6308 221 175 7 619 320 302 32 32 chrUextra 4490855 4491074 -24513582 - DM176_I LTR Gypsy -3175 3245 3027 7 619 724 57 0 0 chrUextra 4491002 4491107 -24513549 - TLD2 Unknown Unknown 0 218 114 7 619 400 0 0 0 chrUextra 4491236 4491284 -24513372 - MAX_LTR LTR Pao -273 48 1 7 619 293 102 0 0 chrUextra 4491290 4491339 -24513317 - MAX_I LTR Pao -2 7912 7864 7 619 1781 161 0 0 chrUextra 4491337 4491654 -24513002 + HMSBEAGLE_I LTR Gypsy 5432 5748 -781 7 619 228 0 0 0 chrUextra 4491757 4491787 -24512869 + DMCR1A LINE CR1 306 335 -4135 7 619 6868 45 1 9 chrUextra 4491774 4492671 -24511985 + DMCR1A LINE CR1 2597 3486 -984 7 619 938 287 45 11 chrUextra 4492782 4493138 -24511518 - HMSBEAGLE_I LTR Gypsy -973 5556 5189 7 619 269 308 82 65 chrUextra 4493253 4493681 -24510975 - HMSBEAGLE_I LTR Gypsy -1567 4962 4528 7 619 2133 149 49 11 chrUextra 4493790 4494259 -24510397 + ROVER-I_DM LTR Gypsy 6098 6584 0 7 619 1760 111 71 28 chrUextra 4494259 4494611 -24510045 + ROVER-LTR_DM LTR Gypsy 1 367 0 7 619 378 177 13 0 chrUextra 4494611 4494690 -24509966 + ROVER-I_DM LTR Gypsy 1 80 -6504 7 619 2134 8 4 0 chrUextra 4494803 4495062 -24509594 + IDEFIX_LTR LTR Gypsy 335 594 0 7 619 25 0 0 0 chrUextra 4495252 4495277 -24509379 + AT_rich Low_complexity Low_complexity 1 25 0 7 619 4640 23 0 0 chrUextra 4495818 4496389 -24508267 - FW_DM LINE Jockey -1594 3098 2528 7 619 2683 18 0 26 chrUextra 4496391 4496733 -24507923 - FW_DM LINE Jockey -2468 2224 1892 7 619 2245 185 79 65 chrUextra 4496833 4497744 -24506912 - TAHRE LINE telomeric -631 9832 9129 7 619 6678 58 9 7 chrUextra 4497848 4498763 -24505893 + R1_DM LINE R1 3 919 -4437 7 619 423 184 354 0 chrUextra 4498896 4499054 -24505602 + PROTOP_B DNA P 940 1153 0 7 619 233 132 0 0 chrUextra 4499054 4499092 -24505564 + PROTOP_B DNA P 1116 1153 0 7 619 445 183 11 0 chrUextra 4499454 4499547 -24505109 + Gypsy12A_LTR LTR Gypsy 2 95 -2185 7 619 579 37 146 0 chrUextra 4499548 4499630 -24505026 + PROTOP_B DNA P 1 94 -1059 7 619 1165 26 7 0 chrUextra 4499626 4499778 -24504878 + PROTOP_B DNA P 224 376 -777 7 619 957 8 0 16 chrUextra 4499878 4499999 -24504657 - DM1731_I LTR Copia -495 3481 3363 7 619 7116 18 0 0 chrUextra 4500000 4500793 -24503863 - DM1731_I LTR Copia -615 3361 2569 7 619 4627 11 21 0 chrUextra 4500893 4501455 -24503201 + Stalker2_I LTR Gypsy 578 1151 -6251 7 619 1077 8 0 0 chrUextra 4501677 4501808 -24502848 + Stalker2_I LTR Gypsy 1132 1262 -6140 7 619 2229 7 7 2 chrUextra 4502923 4503359 -24501297 - DMRT1B LINE R1 -3938 1245 713 7 619 479 0 0 0 chrUextra 4503360 4503414 -24501242 - QUASIMODO_LTR LTR Gypsy -604 54 1 7 619 3586 7 0 0 chrUextra 4503414 4503838 -24500818 - QUASIMODO_I LTR Gypsy 0 6060 5637 7 619 7833 16 16 0 chrUextra 4503938 4504853 -24499803 + Invader2_I LTR Gypsy 3049 3978 -614 7 619 3706 0 0 2 chrUextra 4504965 4505368 -24499288 - STALKER4_LTR LTR Gypsy 0 402 1 7 619 4116 26 40 2 chrUextra 4505368 4505868 -24498788 - ROOA_I LTR Pao -4457 2392 1874 7 619 1390 160 8 24 chrUextra 4505970 4506220 -24498436 - Gypsy12_LTR LTR Gypsy -2090 246 1 7 619 3046 75 72 21 chrUextra 4506219 4506883 -24497773 - Gypsy12_I LTR Gypsy 0 5546 4849 7 619 4017 7 0 0 chrUextra 4506983 4507430 -24497226 - QUASIMODO_LTR LTR Gypsy -211 447 1 7 619 1167 8 0 8 chrUextra 4507437 4507569 -24497087 - MICROPIA_LTR LTR Gypsy 0 476 346 7 619 1940 19 306 12 chrUextra 4507575 4507895 -24496761 - MICROPIA_I LTR Gypsy -1207 3269 2856 7 619 2749 44 97 0 chrUextra 4508010 4508473 -24496183 + R2_DM LINE R2 3094 3601 -6 7 619 2550 42 20 0 chrUextra 4508469 4508775 -24495881 + LSU-rRNA_Dme rRNA rRNA 2578 2889 -1011 7 619 1035 36 14 14 chrUextra 4508774 4508913 -24495743 + LSU-rRNA_Dme rRNA rRNA 1227 1365 -2535 7 619 23 0 0 0 chrUextra 4509148 4509171 -24495485 + AT_rich Low_complexity Low_complexity 1 23 0 7 619 1874 83 214 9 chrUextra 4510028 4510508 -24494148 + PROTOP_B DNA P 241 856 -297 7 619 3012 87 0 2 chrUextra 4510516 4510919 -24493737 - Jockey2 LINE Jockey -1608 1820 1419 7 619 2600 96 19 42 chrUextra 4511043 4511942 -24492714 - DMSAT6 Satellite Satellite -32 878 1 7 619 3853 167 16 39 chrUextra 4512064 4512973 -24491683 - SAR_DM Satellite Satellite -694 888 1 7 619 2107 15 53 11 chrUextra 4513078 4513342 -24491314 + BLASTOPIA_LTR LTR Gypsy 1 275 0 7 619 5960 0 1 0 chrUextra 4513342 4513988 -24490668 + BLASTOPIA_I LTR Gypsy 1 647 -3834 7 619 964 326 50 47 chrUextra 4514088 4514626 -24490030 - Gypsy4_I LTR Gypsy -2915 3373 2668 7 619 1627 28 19 0 chrUextra 4514626 4514840 -24489816 - TLD2 Unknown Unknown 0 218 1 7 619 964 326 50 47 chrUextra 4514840 4514988 -24489668 - Gypsy4_I LTR Gypsy -2915 2667 2471 7 619 2336 178 8 4 chrUextra 4515103 4515578 -24489078 + SAR_DM Satellite Satellite 293 769 -703 7 619 3898 7 0 5 chrUextra 4515582 4516016 -24488640 - IVK_DM LINE I 0 5402 4971 7 619 4053 188 16 22 chrUextra 4516116 4517030 -24487626 - SAR_DM Satellite Satellite -458 908 1 7 619 2405 21 3 7 chrUextra 4517130 4517420 -24487236 - R1_DM LINE R1 -1301 4055 3767 7 619 5362 32 2 2 chrUextra 4517410 4518042 -24486614 - R1_DM LINE R1 -1817 3539 2908 7 619 2457 110 17 31 chrUextra 4518156 4519058 -24485598 - DMSAT6 Satellite Satellite -3 889 1 7 619 7062 49 25 10 chrUextra 4519168 4520072 -24484584 + TART LINE telomeric 3098 4015 -10462 7 619 6391 3 0 0 chrUextra 4520172 4520858 -24483798 + LSU-rRNA_Dme rRNA rRNA 1947 2632 -1268 7 619 2050 4 9 0 chrUextra 4520858 4521086 -24483570 + R1_DM LINE R1 1 230 -5126 7 619 7609 28 38 7 chrUextra 4521186 4522100 -24482556 - R1_DM LINE R1 -2172 3184 2242 7 619 3825 188 15 19 chrUextra 4522200 4523114 -24481542 + SAR_DM Satellite Satellite 1 910 -216 7 619 1416 0 0 0 chrUextra 4523214 4523383 -24481273 + DOC LINE Jockey 4553 4721 -4 7 619 3063 202 27 4 chrUextra 4523399 4524114 -24480542 + SAR_DM Satellite Satellite 326 1056 -416 7 619 4053 181 12 11 chrUextra 4524253 4525137 -24479519 - SAR_DM Satellite Satellite -396 1076 192 7 619 7199 47 31 3 chrUextra 4527270 4528184 -24476472 - R1_DM LINE R1 -4193 1163 225 7 619 1524 35 0 0 chrUextra 4528284 4528455 -24476201 + R1_DM LINE R1 5186 5356 0 7 619 4503 62 3 3 chrUextra 4528489 4529057 -24475599 + R1_DM LINE R1 24 591 -4765 7 619 1161 27 34 0 chrUextra 4529047 4529196 -24475460 + R1_DM LINE R1 796 949 -4407 7 619 298 277 99 73 chrUextra 4529446 4529637 -24475019 + Invader1_LTR LTR Gypsy 84 279 -144 7 619 376 49 65 16 chrUextra 4529682 4529744 -24474912 - HMSBEAGLE_I LTR Gypsy -6464 65 1 7 619 1016 168 102 15 chrUextra 4529743 4529948 -24474708 - DMLTR5 LTR Gypsy 0 266 44 7 619 512 120 98 0 chrUextra 4531407 4531499 -24473157 + NTS_DM Other Other 4 104 -136 7 619 26 93 0 0 chrUextra 4531904 4531979 -24472677 + AT_rich Low_complexity Low_complexity 1 75 0 7 619 32 0 0 0 chrUextra 4532073 4532105 -24472551 + AT_rich Low_complexity Low_complexity 1 32 0 7 619 2671 95 39 9 chrUextra 4532340 4533250 -24471406 + DMSAT6 Satellite Satellite 1 937 -119 7 619 7941 25 0 3 chrUextra 4533356 4534268 -24470388 + G5_DM LINE Jockey 2604 3512 -1344 7 619 4528 75 0 3 chrUextra 4534368 4534959 -24469697 + STALKER4_I LTR Gypsy 5395 5983 -547 7 619 2975 6 0 0 chrUextra 4534960 4535282 -24469374 + STALKER4_I LTR Gypsy 3870 4191 -2339 7 619 1234 139 111 9 chrUextra 4535382 4535607 -24469049 - MDG1_LTR LTR Gypsy -106 336 89 7 619 386 77 0 44 chrUextra 4535609 4535677 -24468979 + (TTA)n Simple_repeat Simple_repeat 2 66 0 7 619 3955 0 0 2 chrUextra 4535677 4536102 -24468554 + ROO_LTR LTR Pao 5 428 0 7 619 1557 17 0 0 chrUextra 4536103 4536283 -24468373 + (TTA)n Simple_repeat Simple_repeat 1 180 0 7 619 5176 17 0 0 chrUextra 4536396 4536990 -24467666 + FW_DM LINE Jockey 2650 3243 -1449 7 619 2245 75 2 24 chrUextra 4536990 4537310 -24467346 - STALKER4_LTR LTR Gypsy -10 392 94 7 619 457 256 131 24 chrUextra 4537410 4537578 -24467078 - TAHRE LINE telomeric -471 9992 9807 7 619 3283 182 45 22 chrUextra 4537590 4538282 -24466374 - Gypsy12_LTR LTR Gypsy -23 2313 1606 7 619 3439 16 0 0 chrUextra 4538424 4538807 -24465849 - PROTOP_A DNA P -722 383 1 7 619 810 48 29 0 chrUextra 4538807 4538895 -24465761 - DOC3_DM LINE Jockey -2611 2129 2039 7 619 3805 20 27 2 chrUextra 4538895 4539337 -24465319 + Gypsy12_LTR LTR Gypsy 1 453 -1883 7 619 7872 27 1 1 chrUextra 4539438 4540351 -24464305 - R1_DM LINE R1 -1251 4105 3193 7 619 8404 0 1 3 chrUextra 4540451 4541364 -24463292 + SSU-rRNA_Dme rRNA rRNA 545 1455 -540 7 619 4086 9 0 0 chrUextra 4541464 4541919 -24462737 + QUASIMODO_I LTR Gypsy 1864 2318 -3742 7 619 4214 0 0 11 chrUextra 4541919 4542377 -24462279 - HOBO DNA hAT 0 3016 2564 7 619 5363 96 50 26 chrUextra 4542477 4543374 -24461282 - PROTOP_A DNA P -186 919 1 7 619 7482 32 22 8 chrUextra 4544504 4545416 -24459240 + ROO_I LTR Pao 3688 4612 -3644 7 619 21 89 0 0 chrUextra 4546331 4546387 -24458269 + AT_rich Low_complexity Low_complexity 1 56 0 7 619 1588 105 22 38 chrUextra 4546529 4546796 -24457860 - Gypsy12_I LTR Gypsy -5257 289 27 7 619 1815 187 18 26 chrUextra 4546766 4547155 -24457501 - Gypsy12_LTR LTR Gypsy -1938 398 13 7 619 2112 70 4 11 chrUextra 4547168 4547442 -24457214 - Gypsy12_I LTR Gypsy 0 5546 5275 7 619 423 222 0 0 chrUextra 4547549 4547639 -24457017 - IDEFIX_I LTR Gypsy -4487 1141 1052 7 619 3254 99 84 45 chrUextra 4547806 4548378 -24456278 - IDEFIX_LTR LTR Gypsy 0 594 1 7 619 5124 0 15 0 chrUextra 4548555 4549149 -24455507 - ROO_I LTR Pao -7285 971 369 7 619 2454 11 0 0 chrUextra 4549149 4549415 -24455241 - DMLTR5 LTR Gypsy 0 266 1 7 619 434 38 0 0 chrUextra 4549415 4549468 -24455188 - HMSBEAGLE_I LTR Gypsy 0 6529 6477 7 619 4137 8 0 63 chrUextra 4549569 4550077 -24454579 + MICROPIA_LTR LTR Gypsy 1 476 0 7 619 3507 20 5 0 chrUextra 4550077 4550481 -24454175 - ACCORD2_I LTR Gypsy -6128 1084 679 7 619 442 248 122 14 chrUextra 4550596 4550743 -24453913 - HETA LINE telomeric -478 5603 5441 7 619 1167 144 45 5 chrUextra 4550733 4550935 -24453721 - Gypsy12A_LTR LTR Gypsy -18 2262 2053 7 619 4274 93 2 0 chrUextra 4550933 4551494 -24453162 - Gypsy12_I LTR Gypsy -924 4622 4061 7 619 6459 96 20 11 chrUextra 4551594 4552507 -24452149 + Gypsy12_I LTR Gypsy 1800 2720 -2826 7 619 3584 185 22 41 chrUextra 4552609 4553520 -24451136 + SAR_DM Satellite Satellite 90 983 -489 7 619 4080 30 104 6 chrUextra 4553620 4554533 -24450123 + DMRT1B LINE R1 3608 4610 -573 7 619 6789 58 6 7 chrUextra 4554633 4555508 -24449148 - TRANSIB2 DNA Transib -1961 883 10 7 619 2848 0 0 12 chrUextra 4555646 4555970 -24448686 + ACCORD_LTR LTR Gypsy 239 558 0 7 619 5073 31 0 0 chrUextra 4555970 4556559 -24448097 + R1_DM LINE R1 3126 3714 -1642 7 619 524 125 191 9 chrUextra 4556661 4556762 -24447894 + HOBO DNA hAT 193 312 -2704 7 619 1927 101 203 22 chrUextra 4556762 4557166 -24447490 + PROTOP DNA P 1 477 -4003 7 619 3004 75 0 5 chrUextra 4557143 4557572 -24447084 + HOBO DNA hAT 330 756 -2260 7 619 2297 105 31 34 chrUextra 4559698 4560611 -24444045 - DMSAT6 Satellite Satellite -73 909 1 7 619 4469 41 17 7 chrUextra 4560711 4561295 -24443361 - CIRCE LINE Composite -2846 3510 2921 7 619 2351 25 3 28 chrUextra 4561294 4561616 -24443040 + ROO_I LTR Pao 182 495 -7761 7 619 920 76 9 21 chrUextra 4561735 4562158 -24442498 + RSP Satellite Satellite 1 418 0 7 619 1328 298 0 6 chrUextra 4562163 4562632 -24442024 + G2_DM LINE Jockey 1231 1696 -1406 7 619 506 223 8 15 chrUextra 4562761 4562893 -24441763 - DMLTR5 LTR Gypsy 0 266 136 7 619 227 88 0 0 chrUextra 4562889 4562923 -24441733 - HMSBEAGLE_I LTR Gypsy -92 6437 6404 7 619 272 130 0 0 chrUextra 4563022 4563068 -24441588 - HMSBEAGLE_I LTR Gypsy -124 6405 6360 7 619 2133 142 21 0 chrUextra 4563276 4563649 -24441007 - HMSBEAGLE_I LTR Gypsy -4075 2454 2074 7 619 464 186 0 17 chrUextra 4563749 4563864 -24440792 + XDMR_DM Unknown Unknown 248 360 0 7 619 3566 183 12 20 chrUextra 4563778 4564658 -24439998 - SAR_DM Satellite Satellite -354 1118 246 7 619 598 14 0 0 chrUextra 4564761 4564832 -24439824 + DM176_LTR LTR Gypsy 213 283 -224 7 619 2020 20 16 0 chrUextra 4564833 4565086 -24439570 + DM176_LTR LTR Gypsy 251 507 0 7 619 1135 98 96 19 chrUextra 4565087 4565377 -24439279 - ZAM_I LTR Gypsy -6989 501 1 7 619 1260 167 14 68 chrUextra 4565377 4565673 -24438983 - ZAM_LTR LTR Gypsy 0 472 193 7 619 744 0 0 0 chrUextra 4565773 4565875 -24438781 + Copia_LTR LTR Copia 175 276 0 7 619 232 0 0 0 chrUextra 4565875 4565909 -24438747 + Copia_LTR LTR Copia 243 276 0 7 619 23 0 0 0 chrUextra 4566289 4566312 -24438344 + AT_rich Low_complexity Low_complexity 1 23 0 7 619 4165 6 0 2 chrUextra 4566785 4567273 -24437383 - DOC LINE Jockey -268 4457 3971 7 619 3631 5 0 5 chrUextra 4567265 4567697 -24436959 - DOC LINE Jockey -934 3791 3362 7 619 3563 184 18 23 chrUextra 4567801 4568709 -24435947 - SAR_DM Satellite Satellite -224 1248 346 7 619 2530 214 61 45 chrUextra 4568819 4569720 -24434936 + TAHRE LINE telomeric 7035 7949 -2514 7 619 2257 268 26 35 chrUextra 4569821 4570641 -24434015 + MAX_I LTR Pao 6435 7246 -668 7 619 4484 21 7 10 chrUextra 4570076 4570653 -24434003 - BATUMI_I LTR Pao -962 7001 6427 7 619 404 35 0 0 chrUextra 4570676 4570733 -24433923 + BATUMI_I LTR Pao 7303 7359 -604 7 619 3047 207 46 13 chrUextra 4570838 4571745 -24432911 + SAR_DM Satellite Satellite 272 1208 -264 7 619 442 277 43 98 chrUextra 4571858 4572186 -24432470 - Gypsy12_LTR LTR Gypsy -1348 988 679 7 619 1685 192 9 50 chrUextra 4572336 4572757 -24431899 - Gypsy12_LTR LTR Gypsy -1899 437 34 7 619 2719 3 0 3 chrUextra 4572857 4573173 -24431483 + LSU-rRNA_Dme rRNA rRNA 2341 2655 -1245 7 619 4752 5 0 0 chrUextra 4573173 4573725 -24430931 + R1_DM LINE R1 4805 5356 0 7 619 388 22 0 0 chrUextra 4573723 4573769 -24430887 + LSU-rRNA_Dme rRNA rRNA 2640 2685 -1215 7 619 2536 7 7 0 chrUextra 4573869 4574169 -24430487 - DMRT1B LINE R1 -4881 302 1 7 619 3258 5 0 0 chrUextra 4574397 4574781 -24429875 - DMRT1B LINE R1 -114 5069 4686 7 619 7456 11 34 3 chrUextra 4574881 4575793 -24428863 + G2_DM LINE Jockey 1206 2145 -957 7 619 2951 179 10 10 chrUextra 4575900 4576600 -24428056 + SAR_DM Satellite Satellite 192 891 -581 7 619 1535 50 0 0 chrUextra 4576606 4576805 -24427851 - Gypsy6A_LTR LTR Gypsy 0 420 222 7 619 7041 46 50 0 chrUextra 4576905 4577817 -24426839 - BS2 LINE Jockey -733 3988 3031 7 619 3289 204 13 21 chrUextra 4577917 4578826 -24425830 + SAR_DM Satellite Satellite 303 1204 -268 7 619 516 203 233 0 chrUextra 4578988 4579121 -24425535 - TIRANT_I LTR Gypsy -3752 3940 3777 7 619 21 82 0 0 chrUextra 4579273 4579322 -24425334 + AT_rich Low_complexity Low_complexity 1 49 0 7 619 1404 75 71 4 chrUextra 4579532 4579772 -24424884 - DMCR1A LINE CR1 -91 4379 4124 7 619 493 76 25 12 chrUextra 4579761 4579841 -24424815 - DMCR1A LINE CR1 -761 3709 3629 7 619 41 47 0 34 chrUextra 4579960 4580048 -24424608 + AT_rich Low_complexity Low_complexity 1 85 0 7 619 690 50 60 0 chrUextra 4580146 4580246 -24424410 + DNAREP1_DM LINE Penelope 1 106 -488 7 619 30 45 0 0 chrUextra 4580395 4580439 -24424217 + AT_rich Low_complexity Low_complexity 1 44 0 7 619 7614 10 8 2 chrUextra 4580953 4581865 -24422791 - DOC2_DM LINE Jockey -575 4218 3302 7 619 3768 181 13 20 chrUextra 4581965 4582875 -24421781 + SAR_DM Satellite Satellite 256 1159 -313 7 619 2589 3 0 0 chrUextra 4582977 4583278 -24421378 - DOC LINE Jockey -4414 311 11 7 619 2219 3 3 56 chrUextra 4583989 4584291 -24420365 - ACCORD2_I LTR Gypsy -6926 286 1 7 619 1796 9 0 18 chrUextra 4584291 4584510 -24420146 - ACCORD2_LTR LTR Gypsy 0 215 1 7 619 3177 13 5 0 chrUextra 4584510 4584901 -24419755 + FW_DM LINE Jockey 1495 1887 -2805 7 619 4606 14 2 3 chrUextra 4585342 4585913 -24418743 - PROTOP_A DNA P 0 1105 536 7 619 853 90 0 0 chrUextra 4586013 4586147 -24418509 - ARS406_DM Unknown Unknown -219 134 1 7 619 3824 171 10 11 chrUextra 4586045 4586923 -24417733 + SAR_DM Satellite Satellite 185 1061 -411 7 77 3234 177 34 29 chrUextra 4587025 4587898 -24416758 + SAR_DM Satellite Satellite 287 1164 -308 7 620 3338 178 14 20 chrUextra 4588039 4588948 -24415708 - SAR_DM Satellite Satellite -514 903 1 7 620 3377 191 17 20 chrUextra 4589048 4589937 -24414719 + SAR_DM Satellite Satellite 379 1264 -208 7 620 850 60 0 0 chrUextra 4589840 4589957 -24414699 - ARS406_DM Unknown Unknown -164 189 73 7 620 4893 160 10 9 chrUextra 4590065 4590967 -24413689 - Gypsy5_I LTR Gypsy -2869 3640 2738 7 620 556 212 141 14 chrUextra 4591308 4591528 -24413128 - DM412 LTR Gypsy -2433 4464 4217 7 620 334 202 35 12 chrUextra 4591552 4591637 -24413019 - STALKER4_I LTR Gypsy -2777 3753 3667 7 620 7479 21 13 1 chrUextra 4592081 4592992 -24411664 - R1_DM LINE R1 -11 5345 4424 7 620 676 263 5 5 chrUextra 4593100 4593314 -24411342 + Invader1_I LTR Gypsy 2356 2569 -617 7 620 7374 24 0 1 chrUextra 4594103 4595014 -24409642 + TRANSIB2 DNA Transib 513 1422 -1422 7 620 2328 29 0 7 chrUextra 4595121 4595431 -24409225 - NINJA_I LTR Pao -5703 308 1 7 620 1155 47 0 7 chrUextra 4595431 4595580 -24409076 - NINJA_LTR LTR Pao 0 317 170 7 620 3433 19 7 0 chrUextra 4595575 4595994 -24408662 + PROTOP_A DNA P 684 1105 0 7 620 7721 1 0 0 chrUextra 4596125 4597036 -24407620 + ACCORD_I LTR Gypsy 1900 2810 -3478 7 620 7423 27 16 0 chrUextra 4597136 4598047 -24406609 - R1_DM LINE R1 -2781 2575 1650 7 620 5052 11 5 3 chrUextra 4598147 4598757 -24405899 - QUASIMODO_LTR LTR Gypsy -47 611 1 7 620 4862 67 10 12 chrUextra 4599158 4599843 -24404813 - R1_DM LINE R1 -4672 684 1 7 620 914 44 0 0 chrUextra 4599876 4599990 -24404666 - R1_DM LINE R1 0 5356 5243 7 620 680 0 0 0 chrUextra 4599987 4600069 -24404587 - R1_DM LINE R1 -290 5066 4985 7 620 5540 12 25 0 chrUextra 4600169 4600841 -24403815 - Gypsy4_I LTR Gypsy -1650 4638 3950 7 620 1805 9 32 0 chrUextra 4600854 4601074 -24403582 - Gypsy4_I LTR Gypsy -2392 3896 3670 7 620 3546 184 18 23 chrUextra 4601184 4602089 -24402567 - SAR_DM Satellite Satellite -227 1245 346 7 620 5355 74 48 34 chrUextra 4602202 4603102 -24401554 - TART LINE telomeric -11115 3362 2451 7 620 4529 97 19 27 chrUextra 4603203 4604113 -24400543 + TART LINE telomeric 6981 7678 -6799 7 620 2018 8 0 0 chrUextra 4604213 4604448 -24400208 - TAHRE LINE telomeric -7867 2596 2362 7 620 5187 32 35 16 chrUextra 4604448 4605124 -24399532 - TAHRE LINE telomeric -8422 2041 1353 7 620 5408 3 0 0 chrUextra 4605224 4605856 -24398800 - DOC LINE Jockey -2747 1978 1347 7 620 23 0 0 0 chrUextra 4605861 4605884 -24398772 + AT_rich Low_complexity Low_complexity 1 23 0 7 620 474 175 78 23 chrUextra 4605959 4606088 -24398568 - Invader2_LTR LTR Gypsy 0 266 131 7 620 284 83 42 0 chrUextra 4606085 4606133 -24398523 + BARI1 DNA Tc1 39 88 -1662 7 620 7822 1 0 0 chrUextra 4606235 4607146 -24397510 + G_DM LINE Jockey 590 1500 -2846 7 620 1655 140 121 0 chrUextra 4607246 4607568 -24397088 - R1_DM LINE R1 -458 4898 4538 7 620 241 269 87 29 chrUextra 4607575 4607713 -24396943 - Gypsy8_LTR LTR Gypsy -158 146 1 7 620 865 104 139 6 chrUextra 4607784 4607949 -24396707 + DNAREP1_DM LINE Penelope 1 187 -407 7 620 631 189 48 16 chrUextra 4607969 4608157 -24396499 + DNAREP1_DM LINE Penelope 123 316 -278 7 620 2656 14 3 6 chrUextra 4608257 4608605 -24396051 + DOC LINE Jockey 4379 4725 0 7 620 302 202 65 33 chrUextra 4608699 4608791 -24395865 + Gypsy5_I LTR Gypsy 6411 6505 -4 7 620 267 206 10 49 chrUextra 4609015 4609117 -24395539 + HETA LINE telomeric 5771 5868 -213 7 620 2961 165 8 3 chrUextra 4609269 4610174 -24394482 - SAR_DM Satellite Satellite -645 908 1 7 620 1620 14 0 0 chrUextra 4610592 4610952 -24393704 + (CAAGA)n Simple_repeat Simple_repeat 1 360 0 7 620 3312 198 40 18 chrUextra 4611290 4612201 -24392455 - SAR_DM Satellite Satellite -264 1208 278 7 620 3722 184 17 20 chrUextra 4612301 4613212 -24391444 + SAR_DM Satellite Satellite 1 907 -208 7 620 1293 149 82 33 chrUextra 4613312 4613617 -24391039 - Gypsy6_LTR LTR Gypsy -87 320 1 7 620 1120 6 25 19 chrUextra 4613617 4613778 -24390878 + NTS_DM Other Other 79 240 0 7 620 1847 4 17 13 chrUextra 4613778 4614017 -24390639 + NTS_DM Other Other 1 240 0 7 620 1271 6 0 24 chrUextra 4614017 4614183 -24390473 + NTS_DM Other Other 1 162 -78 7 620 2003 51 70 0 chrUextra 4615334 4615607 -24389049 + G5_DM LINE Jockey 4076 4367 -489 7 620 1812 45 4 0 chrUextra 4615604 4615846 -24388810 + G5_DM LINE Jockey 4602 4844 -12 7 620 247 178 439 8 chrUextra 4615881 4616011 -24388645 + PROTOP DNA P 1 186 -4294 7 620 1809 101 7 20 chrUextra 4616344 4616638 -24388018 - TART LINE telomeric -8865 5612 5323 7 620 1283 160 118 20 chrUextra 4616618 4616924 -24387732 - TART LINE telomeric -10594 3883 3548 7 620 1247 6 90 0 chrUextra 4616922 4617078 -24387578 - PROTOP_B DNA P -983 170 1 7 620 1441 128 57 3 chrUextra 4617507 4617789 -24386867 + DNAREP1_DM LINE Penelope 1 297 -297 7 620 5384 3 0 0 chrUextra 4618364 4618988 -24385668 + R1_DM LINE R1 4725 5348 -8 7 620 2300 4 0 0 chrUextra 4619010 4619274 -24385382 + LSU-rRNA_Dme rRNA rRNA 2640 2903 -997 7 620 2829 132 91 4 chrUextra 4619374 4619892 -24384764 + HMSBEAGLE_I LTR Gypsy 5257 5819 -710 7 620 3152 3 3 0 chrUextra 4620384 4620756 -24383900 - POGO DNA Pogo -235 1886 1514 7 620 4702 2 0 2 chrUextra 4620747 4621294 -24383362 - POGO DNA Pogo -1574 547 2 7 620 3265 194 47 20 chrUextra 4621394 4622304 -24382352 - SAR_DM Satellite Satellite -242 1230 296 7 620 2382 109 33 8 chrUextra 4622404 4623314 -24381342 + DMSAT6 Satellite Satellite 1 933 -29 7 620 520 317 41 32 chrUextra 4623419 4623758 -24380898 - MICROPIA_I LTR Gypsy -4134 342 1 7 620 231 320 20 85 chrUextra 4623785 4624031 -24380625 - ACCORD2_I LTR Gypsy -6457 755 526 7 620 2820 66 5 18 chrUextra 4624930 4625330 -24379326 + Baggins1 LINE LOA 4791 5185 -268 7 620 3345 194 23 12 chrUextra 4625440 4626323 -24378333 - SAR_DM Satellite Satellite -396 1076 185 7 620 470 183 16 16 chrUextra 4626221 4626343 -24378313 + ARS406_DM Unknown Unknown 2 123 -230 7 620 3333 11 25 14 chrUextra 4626444 4626885 -24377771 - QUASIMODO_I LTR Gypsy -4170 1890 1445 7 620 3544 15 86 0 chrUextra 4626890 4627354 -24377302 - QUASIMODO_I LTR Gypsy -2829 3231 2728 7 620 230 0 0 0 chrUextra 4627454 4627481 -24377175 + ROO_I LTR Pao 8230 8256 0 7 620 3742 2 0 0 chrUextra 4627481 4627909 -24376747 + ROO_LTR LTR Pao 1 428 0 7 620 371 116 87 0 chrUextra 4627909 4627972 -24376684 - ROVER-LTR_DM LTR Gypsy -298 69 1 7 620 589 116 0 0 chrUextra 4627975 4628070 -24376586 + STALKER4_LTR LTR Gypsy 271 365 -37 7 620 5317 9 0 0 chrUextra 4628464 4629096 -24375560 + FW_DM LINE Jockey 4059 4690 -2 7 620 1399 34 0 0 chrUextra 4629196 4629374 -24375282 - DOC3_DM LINE Jockey 0 4740 4563 7 620 4538 16 0 7 chrUextra 4629474 4630027 -24374629 + MICROPIA_I LTR Gypsy 3587 4135 -341 7 620 666 12 0 0 chrUextra 4630024 4630104 -24374552 + MICROPIA_LTR LTR Gypsy 32 111 -365 7 620 814 248 8 24 chrUextra 4630108 4630356 -24374300 - DMLTR5 LTR Gypsy -22 244 1 7 620 238 0 0 0 chrUextra 4630357 4630384 -24374272 + DMCR1A LINE CR1 1624 1650 -2820 7 620 6593 47 71 1 chrUextra 4630484 4631394 -24373262 - DMCR1A LINE CR1 -2896 1574 601 7 620 3477 190 17 21 chrUextra 4631503 4632403 -24372253 + SAR_DM Satellite Satellite 369 1264 -208 7 620 1682 100 28 0 chrUextra 4632504 4632753 -24371903 - Gypsy_I LTR Gypsy -789 5718 5463 7 620 231 139 0 0 chrUextra 4632754 4632797 -24371859 + G6_DM LINE Jockey 1 43 -1999 7 620 1107 101 10 46 chrUextra 4633514 4633711 -24370945 + DM297_I LTR Gypsy 2578 2767 -3400 7 620 1336 74 28 9 chrUextra 4633740 4633957 -24370699 + DM297_I LTR Gypsy 2707 2927 -3240 7 620 475 145 0 0 chrUextra 4633961 4634037 -24370619 - BS3_DM LINE Jockey -404 1386 1311 7 620 2944 63 2 0 chrUextra 4634027 4634423 -24370233 - BS3_DM LINE Jockey -746 1044 648 7 620 4177 68 70 12 chrUextra 4635532 4636439 -24368217 + TART LINE telomeric 7057 7678 -6799 7 620 943 186 102 0 chrUextra 4636988 4637214 -24367442 + FW_DM LINE Jockey 1437 1685 -3007 7 620 584 53 0 0 chrUextra 4637229 4637304 -24367352 + FW_DM LINE Jockey 1898 1972 -2720 7 620 783 151 41 7 chrUextra 4637302 4637449 -24367207 + FW_DM LINE Jockey 2403 2554 -2138 7 620 2552 84 21 30 chrUextra 4637551 4638459 -24366197 + DMSAT6 Satellite Satellite 1 900 -74 7 620 4591 122 48 52 chrUextra 4638559 4639467 -24365189 - TART LINE telomeric -8115 6362 5458 7 620 2295 18 4 0 chrUextra 4639568 4639842 -24364814 + Gypsy4_LTR LTR Gypsy 13 287 0 7 620 5149 8 2 0 chrUextra 4639842 4640477 -24364179 + Gypsy4_I LTR Gypsy 1 636 -5652 7 620 1554 0 11 0 chrUextra 4640577 4640767 -24363889 - NTS_DM Other Other -48 192 1 7 620 1850 4 17 13 chrUextra 4640767 4641006 -24363650 - NTS_DM Other Other 0 240 1 7 620 2219 4 4 4 chrUextra 4641026 4641302 -24363354 + Copia_LTR LTR Copia 1 276 0 7 620 1446 6 0 22 chrUextra 4641302 4641486 -24363170 + Copia_I LTR Copia 1 180 -4413 7 620 3431 89 20 8 chrUextra 4641588 4642096 -24362560 - Gypsy12_I LTR Gypsy -3906 1640 1127 7 620 2472 84 2 45 chrUextra 4642094 4642495 -24362161 - Gypsy12_I LTR Gypsy -5091 455 72 7 620 7579 6 33 0 chrUextra 4642595 4643504 -24361152 - DM1731_I LTR Copia -1258 2718 1780 7 620 3984 2 0 0 chrUextra 4643604 4644074 -24360582 - QUASIMODO_LTR LTR Gypsy -188 470 1 7 620 3398 5 0 5 chrUextra 4644074 4644513 -24360143 - STALKER4_I LTR Gypsy -55 6475 6039 7 620 2261 92 34 33 chrUextra 4644615 4645522 -24359134 - DMSAT6 Satellite Satellite -66 908 1 7 620 3161 57 60 7 chrUextra 4646068 4646531 -24358125 + PROTOP DNA P 1 488 -3992 7 620 5602 98 46 0 chrUextra 4646631 4647540 -24357116 - TART_B1 LINE telomeric -7660 2994 2044 7 620 1726 170 8 5 chrUextra 4647640 4648013 -24356643 - SAR_DM Satellite Satellite -700 772 399 7 620 4420 13 24 0 chrUextra 4648015 4648549 -24356107 + IVK_DM LINE I 1 547 -4855 7 620 2888 208 25 12 chrUextra 4648682 4649556 -24355100 + SAR_DM Satellite Satellite 1 885 -354 7 620 2010 32 3 102 chrUextra 4649658 4649973 -24354683 + Gypsy12_LTR LTR Gypsy 653 936 -1400 7 620 551 176 81 51 chrUextra 4649980 4650177 -24354479 - DMCR1A LINE CR1 -41 4429 4227 7 620 7261 24 7 0 chrUextra 4650667 4651557 -24353099 + R1_DM LINE R1 4461 5356 0 7 620 7579 7 13 0 chrUextra 4651676 4652585 -24352071 + STALKER4_I LTR Gypsy 1444 2364 -4166 7 620 3597 188 9 14 chrUextra 4652692 4653578 -24351078 - SAR_DM Satellite Satellite -396 1076 195 7 620 552 147 0 9 chrUextra 4653484 4653594 -24351062 + ARS406_DM Unknown Unknown 1 109 -244 7 620 1794 175 15 5 chrUextra 4653694 4654090 -24350566 + SAR_DM Satellite Satellite 500 899 -573 7 620 7686 19 0 0 chrUextra 4654703 4655612 -24349044 - BEL_I LTR Pao -1146 4258 3350 7 620 330 328 28 38 chrUextra 4656052 4656379 -24348277 - Gypsy3_I LTR Gypsy -5255 1757 1218 7 620 1968 25 0 0 chrUextra 4656721 4656958 -24347698 + Baggins1 LINE LOA 3533 3769 -1684 7 620 3332 39 0 0 chrUextra 4656956 4657369 -24347287 + Baggins1 LINE LOA 4054 4466 -987 7 620 2062 42 0 0 chrUextra 4657371 4657630 -24347026 + Baggins1 LINE LOA 4364 4622 -831 7 620 3445 184 34 18 chrUextra 4657742 4658633 -24346023 + SAR_DM Satellite Satellite 326 1230 -242 7 620 2414 94 23 34 chrUextra 4658740 4659621 -24345035 - DMSAT6 Satellite Satellite -13 871 1 7 620 2077 43 63 11 chrUextra 4660047 4660331 -24344325 + PROTOP DNA P 1 299 -4181 7 620 1177 47 86 0 chrUextra 4660318 4660657 -24343999 + PROTOP_A DNA P 522 757 -3723 7 620 1300 0 0 7 chrUextra 4660757 4660909 -24343747 + LSU-rRNA_Dme rRNA rRNA 2482 2632 -1268 7 620 1470 0 6 0 chrUextra 4660909 4661082 -24343574 + R1_DM LINE R1 1 174 -5182 7 620 4868 2 0 3 chrUextra 4661097 4661666 -24342990 + R2_DM LINE R2 653 1219 -2388 7 620 3207 179 49 54 chrUextra 4661802 4662674 -24341982 + Gypsy12_LTR LTR Gypsy 1456 2323 -13 7 620 3503 192 7 21 chrUextra 4662774 4663682 -24340974 + SAR_DM Satellite Satellite 1 895 -354 7 620 460 71 0 0 chrUextra 4663782 4663852 -24340804 + S_DM DNA Tc1 1667 1736 0 7 620 1034 15 0 8 chrUextra 4663852 4663979 -24340677 - CIRCE LINE Composite -1861 4495 4370 7 620 1847 92 45 64 chrUextra 4663979 4664353 -24340303 - ROVER-LTR_DM LTR Gypsy 0 367 1 7 620 1487 139 65 15 chrUextra 4664353 4664690 -24339966 - ROVER-I_DM LTR Gypsy 0 6584 6231 7 620 946 82 10 21 chrUextra 4664848 4665698 -24338958 - RSP Satellite Satellite 0 841 1 7 620 3062 0 0 0 chrUextra 4665798 4666155 -24338501 - NOMAD_LTR LTR Gypsy -161 357 1 7 620 551 4 127 11 chrUextra 4666155 4666706 -24337950 + (TA)n Simple_repeat Simple_repeat 1 615 0 7 620 2429 3 0 0 chrUextra 4666806 4667089 -24337567 + Copia_I LTR Copia 4311 4593 0 7 620 2260 7 0 0 chrUextra 4667089 4667365 -24337291 + Copia_LTR LTR Copia 1 276 0 7 620 2985 9 0 0 chrUextra 4667365 4667714 -24336942 - STALKER4_I LTR Gypsy -1991 4539 4191 7 620 361 119 15 0 chrUextra 4667814 4667881 -24336775 - ARS406_DM Unknown Unknown -285 68 1 7 620 3701 180 7 18 chrUextra 4667842 4668717 -24335939 + SAR_DM Satellite Satellite 247 1111 -361 7 620 3267 216 76 14 chrUextra 4668822 4669730 -24334926 + ROVER-I_DM LTR Gypsy 1866 2829 -3755 7 620 3621 191 12 19 chrUextra 4669830 4670730 -24333926 + SAR_DM Satellite Satellite 1 893 -255 7 620 972 9 0 0 chrUextra 4670838 4670950 -24333706 - LSU-rRNA_Dme rRNA rRNA -1149 2751 2640 7 620 3798 0 0 0 chrUextra 4670948 4671384 -24333272 - R1_DM LINE R1 0 5356 4921 7 620 3102 6 0 0 chrUextra 4671387 4671746 -24332910 - R1_DM LINE R1 0 5356 4998 7 620 2849 142 55 11 chrUextra 4671847 4672388 -24332268 - TART LINE telomeric -10618 3859 3295 7 620 1620 66 209 28 chrUextra 4672400 4672754 -24331902 - TART LINE telomeric -11327 3150 2733 7 620 5817 81 82 2 chrUextra 4672854 4673762 -24330894 + TART LINE telomeric 135 1114 -13363 7 620 6104 62 6 1 chrUextra 4673862 4674768 -24329888 - TART LINE telomeric -12007 2470 1666 7 620 244 128 0 21 chrUextra 4675113 4675161 -24329495 - HMSBEAGLE_I LTR Gypsy -6308 221 175 7 620 244 128 0 21 chrUextra 4675322 4675370 -24329286 - HMSBEAGLE_I LTR Gypsy -6308 221 175 7 620 244 128 0 21 chrUextra 4675600 4675648 -24329008 - HMSBEAGLE_I LTR Gypsy -6308 221 175 7 620 351 49 65 16 chrUextra 4675670 4675732 -24328924 - HMSBEAGLE_I LTR Gypsy -6464 65 1 7 620 2420 144 18 75 chrUextra 4675880 4676711 -24327945 - HETA LINE telomeric -5404 677 1 7 620 510 44 0 0 chrUextra 4676718 4676786 -24327870 - HETA LINE telomeric 0 6081 6014 7 620 2179 134 24 19 chrUextra 4676886 4677790 -24326866 - DMSAT6 Satellite Satellite -7 909 1 7 620 3735 186 17 23 chrUextra 4677894 4678802 -24325854 - SAR_DM Satellite Satellite -416 902 1 7 620 986 191 69 9 chrUextra 4678903 4679135 -24325521 - HETA LINE telomeric -1805 4276 4031 7 620 22 56 0 0 chrUextra 4679285 4679321 -24325335 + AT_rich Low_complexity Low_complexity 1 36 0 7 620 295 187 50 101 chrUextra 4679366 4679485 -24325171 + Copia_I LTR Copia 4401 4513 -80 7 620 7131 25 51 1 chrUextra 4679910 4680818 -24323838 + R1_DM LINE R1 3435 4387 -969 7 620 3601 182 14 17 chrUextra 4680919 4681826 -24322830 + SAR_DM Satellite Satellite 1 904 -396 7 620 1773 23 0 0 chrUextra 4681927 4682141 -24322515 + DIVER_I LTR Pao 5430 5643 0 7 620 1204 103 0 100 chrUextra 4682141 4682390 -24322266 + DIVER_LTR LTR Pao 1 224 0 7 620 3404 14 24 0 chrUextra 4682411 4682834 -24321822 - STALKER4_I LTR Gypsy -3882 2648 2216 7 620 21 89 0 0 chrUextra 4683694 4683750 -24320906 + AT_rich Low_complexity Low_complexity 1 56 0 7 620 23 68 0 0 chrUextra 4683788 4683832 -24320824 + AT_rich Low_complexity Low_complexity 1 44 0 7 620 4160 37 74 0 chrUextra 4683942 4684482 -24320174 - Baggins1 LINE LOA -1493 3960 3381 7 620 2777 55 0 0 chrUextra 4684488 4684850 -24319806 - Baggins1 LINE LOA -3237 2216 1855 7 620 2478 93 5 11 chrUextra 4684953 4685388 -24319268 - S_DM DNA Tc1 -1304 432 1 7 620 3832 11 0 15 chrUextra 4685388 4685858 -24318798 - CIRCE LINE Composite -1861 4495 4033 7 620 1384 0 0 0 chrUextra 4685958 4686119 -24318537 - ROO_LTR LTR Pao -267 161 1 7 620 1578 35 3 0 chrUextra 4686120 4686866 -24317790 + (CTTAT)n Simple_repeat Simple_repeat 1 748 0 7 620 3411 191 18 20 chrUextra 4686984 4687871 -24316785 + SAR_DM Satellite Satellite 326 1210 -262 7 620 881 50 8 0 chrUextra 4687974 4688094 -24316562 - Gypsy6A_LTR LTR Gypsy -299 121 1 7 620 365 143 0 0 chrUextra 4688094 4688151 -24316505 + DNAREP1_DM LINE Penelope 59 115 -479 7 620 257 229 0 0 chrUextra 4688981 4689042 -24315614 + Copia2_I LTR Copia 1860 1920 -2242 7 620 250 311 52 13 chrUextra 4689036 4689189 -24315467 + Copia_I LTR Copia 1958 2116 -2477 7 620 336 314 45 16 chrUextra 4689628 4689874 -24314782 + Copia2_I LTR Copia 2452 2704 -1458 7 620 6450 47 2 21 chrUextra 4689999 4690895 -24313761 - Gypsy7_I LTR Gypsy -4013 971 93 7 620 3289 196 48 10 chrUextra 4692003 4692909 -24311747 - SAR_DM Satellite Satellite -308 1164 225 7 620 5523 91 15 62 chrUextra 4693009 4693916 -24310740 - TART LINE telomeric -9120 5357 4493 7 620 1196 0 6 19 chrUextra 4694016 4694176 -24310480 + ROO_I LTR Pao 8099 8256 0 7 620 3741 2 0 0 chrUextra 4694176 4694604 -24310052 + ROO_LTR LTR Pao 1 428 0 7 620 24 0 0 0 chrUextra 4694768 4694792 -24309864 + AT_rich Low_complexity Low_complexity 1 24 0 7 620 3591 188 14 21 chrUextra 4695023 4695930 -24308726 + SAR_DM Satellite Satellite 1 900 -216 7 620 2443 286 1 5 chrUextra 4696048 4696932 -24307724 - G_DM LINE Jockey -1519 2827 1947 7 620 3769 44 4 0 chrUextra 4697061 4697540 -24307116 - FW2_DM LINE Jockey -674 3287 2807 7 620 1752 73 215 0 chrUextra 4697549 4697944 -24306712 - FW2_DM LINE Jockey -1416 2545 2066 7 620 2419 0 18 0 chrUextra 4698044 4698328 -24306328 + BEL_LTR LTR Pao 73 361 0 7 620 4186 44 67 16 chrUextra 4698328 4698951 -24305705 - QUASIMODO_I LTR Gypsy -951 5109 4455 7 620 1429 128 22 25 chrUextra 4699053 4699373 -24305283 - DMSAT6 Satellite Satellite -147 323 5 7 620 2378 179 18 30 chrUextra 4699389 4700965 -24303691 - DMSAT6 Satellite Satellite 0 1557 1 7 620 1293 60 10 23 chrUextra 4701068 4701370 -24303286 + (AATAG)n Simple_repeat Simple_repeat 1 297 0 7 620 1289 56 6 0 chrUextra 4701402 4701581 -24303075 + (AATAG)n Simple_repeat Simple_repeat 1 180 0 7 620 948 129 8 11 chrUextra 4701601 4701966 -24302690 + (AATAG)n Simple_repeat Simple_repeat 1 364 0 7 620 3334 190 20 20 chrUextra 4702072 4702930 -24301726 + SAR_DM Satellite Satellite 407 1264 -208 7 620 1027 49 7 0 chrUextra 4702833 4702975 -24301681 - ARS406_DM Unknown Unknown -164 189 47 7 620 4148 31 7 3 chrUextra 4703079 4703653 -24301003 + IDEFIX_I LTR Gypsy 4982 5557 -71 7 620 23 0 0 0 chrUextra 4703879 4703902 -24300754 + AT_rich Low_complexity Low_complexity 1 23 0 7 620 3937 29 0 0 chrUextra 4704086 4704577 -24300079 + MDG1_I LTR Gypsy 1971 2461 -4135 7 620 3263 34 0 0 chrUextra 4704578 4704993 -24299663 + MDG1_I LTR Gypsy 2982 3396 -3200 7 620 3373 226 12 30 chrUextra 4705093 4706000 -24298656 - ROVER-I_DM LTR Gypsy -4001 2583 1693 7 620 3688 178 16 19 chrUextra 4706102 4706978 -24297678 - SAR_DM Satellite Satellite -353 1119 247 7 620 360 134 0 15 chrUextra 4706939 4707007 -24297649 + ARS406_DM Unknown Unknown 1 67 -286 7 620 4285 96 19 0 chrUextra 4707107 4707742 -24296914 + HMSBEAGLE_I LTR Gypsy 2525 3171 -3358 7 620 1533 121 31 0 chrUextra 4707757 4708013 -24296643 + HMSBEAGLE_I LTR Gypsy 5306 5569 -960 7 620 449 147 90 107 chrUextra 4708192 4708314 -24296342 + G7_DM LINE Jockey 549 668 -524 7 620 3668 9 0 2 chrUextra 4708317 4708746 -24295910 + ROO_LTR LTR Pao 1 428 0 7 620 690 187 150 0 chrUextra 4708784 4708971 -24295685 + G7_DM LINE Jockey 664 878 -314 7 620 2401 94 28 22 chrUextra 4709121 4710028 -24294628 - DMSAT6 Satellite Satellite -45 912 1 7 620 1481 56 0 10 chrUextra 4710129 4710800 -24293856 + (CTTAT)n Simple_repeat Simple_repeat 1 664 0 7 620 1068 24 0 0 chrUextra 4710800 4710926 -24293730 + (ATCTG)n Simple_repeat Simple_repeat 3 129 0 7 620 708 74 0 0 chrUextra 4710927 4711035 -24293621 + (TATCG)n Simple_repeat Simple_repeat 3 110 0 7 620 463 269 0 0 chrUextra 4711135 4711265 -24293391 + MICROPIA_I LTR Gypsy 3747 3876 -600 7 620 6952 34 51 0 chrUextra 4712142 4713049 -24291607 - Baggins1 LINE LOA -4113 1340 388 7 620 1385 18 0 0 chrUextra 4713149 4713312 -24291344 + R1_DM LINE R1 5192 5354 -2 7 620 5124 62 6 3 chrUextra 4713347 4714048 -24290608 + R1_DM LINE R1 1 703 -4653 7 620 7553 1 0 0 chrUextra 4714155 4715061 -24289595 + ROVER-I_DM LTR Gypsy 1212 2117 -4467 7 620 2840 208 25 13 chrUextra 4715161 4716067 -24288589 + SAR_DM Satellite Satellite 1 917 -203 7 620 3160 5 0 49 chrUextra 4716167 4716573 -24288083 - DOC6_DM LINE Jockey -3836 386 1 7 620 330 120 0 0 chrUextra 4716599 4716649 -24288007 + Invader1_I LTR Gypsy 3137 3186 0 7 620 1490 129 17 38 chrUextra 4716649 4716940 -24287716 + Invader1_LTR LTR Gypsy 1 285 -138 7 620 2835 69 18 7 chrUextra 4717173 4717613 -24287043 + MDG1_I LTR Gypsy 691 1135 -5461 7 620 2726 53 13 2 chrUextra 4717685 4718079 -24286577 + MDG1_I LTR Gypsy 1131 1528 -5068 7 620 438 0 0 0 chrUextra 4718179 4718229 -24286427 - Invader1_LTR LTR Gypsy -373 50 1 7 620 218 212 15 0 chrUextra 4718300 4718366 -24286290 + (TAA)n Simple_repeat Simple_repeat 2 68 0 7 621 51 31 0 0 chrUextra 4718845 4718910 -24285746 + AT_rich Low_complexity Low_complexity 1 65 0 7 621 2557 84 23 24 chrUextra 4719185 4720091 -24284565 + DMSAT6 Satellite Satellite 1 905 -28 7 621 4478 3 59 2 chrUextra 4720191 4720764 -24283892 + LSU-rRNA_Dme rRNA rRNA 2027 2632 -1268 7 621 2836 3 6 0 chrUextra 4720764 4721097 -24283559 + R1_DM LINE R1 1 335 -5021 7 621 3029 191 15 21 chrUextra 4721207 4722101 -24282555 - SAR_DM Satellite Satellite -514 888 1 7 621 5509 36 34 4 chrUextra 4722203 4723109 -24281547 + BATUMI_I LTR Pao 4315 5422 -2541 7 621 3522 172 20 27 chrUextra 4723209 4724098 -24280558 - SAR_DM Satellite Satellite -264 1208 326 7 621 981 294 35 0 chrUextra 4724219 4724566 -24280090 - ROVER-I_DM LTR Gypsy -5107 1477 1119 7 621 682 24 0 0 chrUextra 4724573 4724655 -24280001 - TLD3 Unknown Unknown -89 83 2 7 621 1145 291 16 16 chrUextra 4724633 4725118 -24279538 + ROVER-I_DM LTR Gypsy 2576 3060 -3524 7 621 2289 55 37 19 chrUextra 4725223 4725597 -24279059 + ACCORD2_I LTR Gypsy 1635 2015 -5197 7 621 4362 26 0 0 chrUextra 4725595 4726127 -24278529 + ACCORD2_I LTR Gypsy 2128 2659 -4553 7 621 3415 188 34 17 chrUextra 4726230 4727133 -24277523 + SAR_DM Satellite Satellite 1 917 -313 7 621 2010 67 0 0 chrUextra 4727233 4727501 -24277155 + Gypsy12_I LTR Gypsy 3450 3717 -1829 7 621 4240 105 2 0 chrUextra 4727522 4728139 -24276517 + Gypsy12_I LTR Gypsy 3830 4447 -1099 7 621 1034 15 0 8 chrUextra 4728250 4728377 -24276279 - CIRCE LINE Composite -1861 4495 4370 7 621 1846 92 45 64 chrUextra 4728377 4728751 -24275905 - ROVER-LTR_DM LTR Gypsy 0 367 1 7 621 1645 134 57 18 chrUextra 4728759 4729145 -24275511 - ROVER-I_DM LTR Gypsy -18 6566 6166 7 621 5440 3 0 0 chrUextra 4729245 4729886 -24274770 - DMRT1B LINE R1 -4275 908 268 7 621 1620 0 0 0 chrUextra 4729887 4730151 -24274505 + (TTGTG)n Simple_repeat Simple_repeat 1 264 0 7 621 2154 11 0 25 chrUextra 4730251 4730533 -24274123 + PROTOP DNA P 4206 4480 0 7 621 310 225 0 0 chrUextra 4730533 4730602 -24274054 + BS2 LINE Jockey 4146 4214 -507 7 621 791 110 58 6 chrUextra 4731257 4731431 -24273225 + HMSBEAGLE_I LTR Gypsy 528 710 -5819 7 621 4272 89 24 13 chrUextra 4731529 4732163 -24272493 + HMSBEAGLE_I LTR Gypsy 1122 1762 -4767 7 621 304 174 23 0 chrUextra 4732375 4732454 -24272202 - PROTOP_A DNA P -981 124 43 7 621 71 67 0 0 chrUextra 4732798 4732932 -24271724 + AT_rich Low_complexity Low_complexity 1 134 0 7 621 7805 4 2 1 chrUextra 4733269 4734175 -24270481 - LSU-rRNA_Dme rRNA rRNA -23 3877 2971 7 621 2537 181 92 20 chrUextra 4734275 4735179 -24269477 - TAHRE LINE telomeric -2183 8280 7373 7 621 3410 173 15 41 chrUextra 4735281 4736167 -24268489 + SAR_DM Satellite Satellite 256 1118 -354 7 621 366 168 19 29 chrUextra 4736082 4736186 -24268470 - XDMR_DM Unknown Unknown 0 360 258 7 621 7424 19 8 4 chrUextra 4736286 4737191 -24267465 + LSU-rRNA_Dme rRNA rRNA 2606 3513 -387 7 621 2530 3 0 0 chrUextra 4738296 4738590 -24266066 - DM1731_I LTR Copia -1326 2650 2357 7 621 5304 3 0 0 chrUextra 4738588 4739201 -24265455 - DM1731_I LTR Copia -1761 2215 1603 7 621 2668 219 25 52 chrUextra 4739313 4740106 -24264550 - Gypsy12_LTR LTR Gypsy -1564 772 1 7 621 325 262 0 0 chrUextra 4740106 4740203 -24264453 - DM297_I LTR Gypsy -2709 3458 3362 7 621 5635 90 16 2 chrUextra 4740310 4741211 -24263445 - MAX_I LTR Pao -1551 6412 5463 7 621 3111 208 26 21 chrUextra 4741316 4742209 -24262447 + SAR_DM Satellite Satellite 295 1191 -281 7 621 3554 194 9 10 chrUextra 4742332 4743218 -24261438 + SAR_DM Satellite Satellite 192 1076 -396 7 621 702 12 0 0 chrUextra 4743321 4743404 -24261252 - Copia2_I LTR Copia -4079 83 1 7 621 1665 5 0 0 chrUextra 4743404 4743601 -24261055 - Copia2_LTR_DM LTR Copia 0 198 2 7 621 1488 19 0 0 chrUextra 4743601 4743809 -24260847 + (TTA)n Simple_repeat Simple_repeat 1 208 0 7 621 1060 81 19 0 chrUextra 4743830 4743990 -24260666 + Jockey2 LINE Jockey 3089 3251 -177 7 621 199 26 77 26 chrUextra 4743996 4744035 -24260621 + (TTTTA)n Simple_repeat Simple_repeat 3 43 0 7 621 1122 29 0 0 chrUextra 4744057 4744195 -24260461 + (TTA)n Simple_repeat Simple_repeat 3 140 0 7 621 2474 117 24 28 chrUextra 4744326 4745231 -24259425 + DMSAT6 Satellite Satellite 1 901 -74 7 621 3395 3 0 0 chrUextra 4745331 4745719 -24258937 - GTWIN_LTR LTR Gypsy -107 388 1 7 621 293 196 50 101 chrUextra 4745728 4745847 -24258809 - Copia_I LTR Copia -80 4513 4401 7 621 22 56 0 0 chrUextra 4745892 4745928 -24258728 + AT_rich Low_complexity Low_complexity 1 36 0 7 621 550 197 97 13 chrUextra 4746082 4746236 -24258420 + HETA LINE telomeric 4031 4197 -1884 7 621 870 9 0 27 chrUextra 4746338 4746450 -24258206 - NTS_DM Other Other -107 133 25 7 621 22 56 0 0 chrUextra 4746476 4746512 -24258144 + AT_rich Low_complexity Low_complexity 1 36 0 7 621 255 125 0 0 chrUextra 4746525 4746565 -24258091 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 621 246 150 0 0 chrUextra 4746608 4746648 -24258008 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 621 246 150 0 0 chrUextra 4746701 4746741 -24257915 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 621 22 56 0 0 chrUextra 4746746 4746782 -24257874 + AT_rich Low_complexity Low_complexity 1 36 0 7 621 3374 3 0 0 chrUextra 4746854 4747241 -24257415 - LSU-rRNA_Dme rRNA rRNA 0 3900 3514 7 621 2310 103 6 47 chrUextra 4747345 4748246 -24256410 + DMSAT6 Satellite Satellite 1 864 -69 7 621 3073 61 25 2 chrUextra 4748346 4748792 -24255864 - BATUMI_I LTR Pao -205 7758 7303 7 621 2308 50 9 12 chrUextra 4748815 4749141 -24255515 + BATUMI_I LTR Pao 6427 6751 -1212 7 621 886 52 0 8 chrUextra 4749134 4749251 -24255405 - BATUMI_I LTR Pao -4489 3474 3359 7 621 1353 77 0 0 chrUextra 4749352 4749546 -24255110 + HOBO DNA hAT 385 578 -2438 7 621 542 81 0 0 chrUextra 4749543 4749617 -24255039 - Baggins1 LINE LOA -589 4864 4791 7 621 2824 47 3 0 chrUextra 4749724 4750085 -24254571 - Baggins1 LINE LOA -202 5251 4890 7 621 4384 11 34 4 chrUextra 4750356 4750908 -24253748 - IDEFIX_LTR LTR Gypsy -25 569 1 7 621 553 83 127 40 chrUextra 4750912 4751038 -24253618 - MAX_I LTR Pao -7496 418 282 7 621 1281 12 0 0 chrUextra 4751361 4751527 -24253129 + STALKER4_I LTR Gypsy 6365 6530 0 7 621 3177 52 2 14 chrUextra 4751527 4751966 -24252690 + STALKER4_LTR LTR Gypsy 1 392 -10 7 621 1058 70 63 6 chrUextra 4752107 4752266 -24252390 - DMTOM1_LTR LTR Gypsy -150 260 93 7 621 5988 88 39 3 chrUextra 4752366 4753270 -24251386 - TART_B1 LINE telomeric -7362 3292 2357 7 621 1620 31 2 3 chrUextra 4753373 4754276 -24250380 + (CTTAT)n Simple_repeat Simple_repeat 1 902 0 7 621 2013 0 0 0 chrUextra 4754376 4754606 -24250050 + LSU-rRNA_Dme rRNA rRNA 3671 3900 0 7 621 27 29 0 0 chrUextra 4754678 4754712 -24249944 + AT_rich Low_complexity Low_complexity 1 34 0 7 621 22 56 0 0 chrUextra 4754776 4754812 -24249844 + AT_rich Low_complexity Low_complexity 1 36 0 7 621 246 150 0 0 chrUextra 4754817 4754857 -24249799 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 621 246 150 0 0 chrUextra 4754909 4754949 -24249707 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 621 870 9 0 27 chrUextra 4755022 4755134 -24249522 + NTS_DM Other Other 25 133 -107 7 621 1070 21 0 14 chrUextra 4755134 4755281 -24249375 + NTS_DM Other Other 38 182 -58 7 621 2046 4 0 0 chrUextra 4755381 4755619 -24249037 - ROO_I LTR Pao -8018 238 1 7 621 3766 0 0 0 chrUextra 4755619 4756047 -24248609 - ROO_LTR LTR Pao 0 428 1 7 621 2060 8 0 0 chrUextra 4756047 4756286 -24248370 + CIRCE LINE Composite 1939 2177 -4179 7 621 3399 176 50 39 chrUextra 4756387 4757236 -24247420 - Gypsy12_LTR LTR Gypsy -23 2313 1456 7 621 1659 162 11 19 chrUextra 4757390 4757755 -24246901 - HETA LINE telomeric -2265 3816 3455 7 621 2561 119 39 35 chrUextra 4757753 4758294 -24246362 - TART LINE telomeric -4425 10052 9510 7 621 1909 4 0 0 chrUextra 4758394 4758619 -24246037 + MAX_I LTR Pao 7690 7914 0 7 621 2744 9 0 0 chrUextra 4758619 4758940 -24245716 + MAX_LTR LTR Pao 1 321 0 7 621 305 191 14 14 chrUextra 4758944 4759013 -24245643 + HETRP_DM Satellite Satellite 1601 1669 -203 7 621 625 187 14 14 chrUextra 4759146 4759287 -24245369 + HETRP_DM Satellite Satellite 1529 1669 -203 7 621 7241 26 0 0 chrUextra 4759398 4760265 -24244391 - R2_DM LINE R2 -809 2798 1932 7 621 3911 9 0 0 chrUextra 4760402 4760867 -24243789 - G6_DM LINE Jockey -1577 465 1 7 621 286 194 15 15 chrUextra 4760866 4760934 -24243722 + HETRP_DM Satellite Satellite 1602 1669 -203 7 621 210 37 0 0 chrUextra 4761065 4761092 -24243564 + (GA)n Simple_repeat Simple_repeat 2 28 0 7 621 491 208 8 16 chrUextra 4761092 4761214 -24243442 + HETRP_DM Satellite Satellite 1549 1669 -203 7 621 3690 179 6 19 chrUextra 4761413 4762292 -24242364 - SAR_DM Satellite Satellite -411 1061 195 7 621 629 126 0 0 chrUextra 4762199 4762310 -24242346 + ARS406_DM Unknown Unknown 1 111 -242 7 621 553 77 0 0 chrUextra 4762410 4762488 -24242168 - HETA LINE telomeric -4110 1971 1894 7 621 3092 227 52 7 chrUextra 4762484 4763314 -24241342 - TAHRE LINE telomeric -9079 1384 518 7 621 7432 24 1 0 chrUextra 4763414 4764318 -24240338 + R1_DM LINE R1 1332 2236 -3120 7 621 1677 31 53 0 chrUextra 4764418 4764643 -24240013 - IDEFIX_I LTR Gypsy -5391 237 1 7 621 28 0 0 0 chrUextra 4764936 4764964 -24239692 + AT_rich Low_complexity Low_complexity 1 28 0 7 621 979 42 7 47 chrUextra 4765170 4765318 -24239338 - IDEFIX_LTR LTR Gypsy -56 538 397 7 621 2796 99 2 24 chrUextra 4765422 4765877 -24238779 - TART LINE telomeric -7228 7249 6805 7 621 1577 125 3 52 chrUextra 4765887 4766175 -24238481 - TART LINE telomeric -10520 3957 3684 7 621 522 133 33 163 chrUextra 4766171 4766324 -24238332 - TART LINE telomeric -11115 3362 3230 7 621 3683 171 14 22 chrUextra 4766431 4767311 -24237345 + SAR_DM Satellite Satellite 246 1118 -354 7 621 351 204 0 19 chrUextra 4767225 4767330 -24237326 - XDMR_DM Unknown Unknown 0 360 258 7 621 1677 10 0 0 chrUextra 4767430 4767629 -24237027 - ROO_I LTR Pao -8057 199 1 7 621 3699 5 0 2 chrUextra 4767629 4768058 -24236598 - ROO_LTR LTR Pao 0 428 1 7 621 2405 150 72 31 chrUextra 4768724 4769338 -24235318 - PROTOP_A DNA P 0 1105 467 7 621 6974 25 7 25 chrUextra 4769438 4770342 -24234314 - R1_DM LINE R1 -531 4825 3939 7 621 4111 4 0 0 chrUextra 4770442 4770927 -24233729 - QUASIMODO_LTR LTR Gypsy -173 485 1 7 621 3520 5 0 2 chrUextra 4770936 4771346 -24233310 - QUASIMODO_LTR LTR Gypsy 0 658 250 7 621 7601 11 8 0 chrUextra 4771449 4772350 -24232306 - Gypsy4_I LTR Gypsy -3560 2728 1821 7 621 485 48 0 0 chrUextra 4772450 4772513 -24232143 - R1_DM LINE R1 -5293 63 1 7 621 6498 25 2 0 chrUextra 4772546 4773342 -24231314 - R1_DM LINE R1 0 5356 4559 7 621 2226 198 43 29 chrUextra 4773454 4774104 -24230552 - HETA LINE telomeric -1968 4113 3455 7 621 1295 130 82 8 chrUextra 4774102 4774358 -24230298 - HETA LINE telomeric -602 5479 5205 7 621 7843 1 1 0 chrUextra 4774458 4775358 -24229298 + LSU-rRNA_Dme rRNA rRNA 2237 3137 -763 7 621 3522 172 19 27 chrUextra 4775466 4776366 -24228290 - SAR_DM Satellite Satellite -313 1159 267 7 621 3354 186 15 25 chrUextra 4776466 4777370 -24227286 + SAR_DM Satellite Satellite 1 894 -216 7 621 477 217 8 16 chrUextra 4777632 4777754 -24226902 - HETRP_DM Satellite Satellite -203 1669 1549 7 621 192 40 0 0 chrUextra 4777754 4777779 -24226877 + (TC)n Simple_repeat Simple_repeat 2 26 0 7 621 655 186 7 14 chrUextra 4777910 4778052 -24226604 - HETRP_DM Satellite Satellite -203 1669 1529 7 621 648 217 0 32 chrUextra 4778188 4778345 -24226311 - HETRP_DM Satellite Satellite -203 1669 1518 7 621 5123 87 63 10 chrUextra 4778474 4779284 -24225372 + Invader1_I LTR Gypsy 2285 3137 -49 7 621 270 139 0 0 chrUextra 4779335 4779378 -24225278 + Invader1_I LTR Gypsy 3137 3179 -7 7 621 2613 3 9 0 chrUextra 4779481 4779796 -24224860 + DOC2_DM LINE Jockey 1144 1461 -3332 7 621 2945 40 3 18 chrUextra 4779792 4780176 -24224480 + G5A_DM LINE Jockey 2461 2838 -3 7 621 349 269 0 0 chrUextra 4780202 4780310 -24224346 - Gypsy7_I LTR Gypsy -3317 1667 1560 7 621 5211 83 95 30 chrUextra 4780482 4781386 -24223270 + BATUMI_I LTR Pao 795 1757 -6206 7 621 2427 0 7 10 chrUextra 4781486 4781781 -24222875 - Copia_I LTR Copia -4299 294 1 7 621 2249 4 4 0 chrUextra 4781781 4782056 -24222600 - Copia_LTR LTR Copia 0 276 1 7 621 499 115 31 0 chrUextra 4782133 4782229 -24222427 - PROTOP DNA P -861 3619 3521 7 621 3244 188 16 18 chrUextra 4782490 4783394 -24221262 + SAR_DM Satellite Satellite 1 901 -208 7 621 3703 179 14 25 chrUextra 4783499 4784396 -24220260 - SAR_DM Satellite Satellite -216 1256 369 7 621 3365 2 5 0 chrUextra 4784498 4784911 -24219745 - LSU-rRNA_Dme rRNA rRNA -3140 760 346 7 621 1930 0 0 0 chrUextra 4784926 4785148 -24219508 - LSU-rRNA_Dme rRNA rRNA -3678 222 1 7 621 21 95 0 0 chrUextra 4785160 4785223 -24219433 + AT_rich Low_complexity Low_complexity 1 63 0 7 621 1630 32 20 4 chrUextra 4785502 4785751 -24218905 + STALKER4_I LTR Gypsy 6278 6530 0 7 621 1961 4 0 0 chrUextra 4785751 4785979 -24218677 + STALKER4_LTR LTR Gypsy 1 228 -174 7 621 2852 81 5 2 chrUextra 4785983 4786405 -24218251 + S_DM DNA Tc1 764 1186 -550 7 621 7167 33 29 0 chrUextra 4786505 4787408 -24217248 + R1_DM LINE R1 1197 2125 -3231 7 621 776 176 25 25 chrUextra 4787579 4787788 -24216868 - DNAREP1_DM LINE Penelope -262 332 117 7 621 967 115 19 0 chrUextra 4787851 4788008 -24216648 - DNAREP1_DM LINE Penelope -429 165 6 7 621 824 261 18 108 chrUextra 4788772 4789224 -24215432 - Invader3_I LTR Gypsy -1735 3153 2743 7 621 40 49 0 0 chrUextra 4789524 4789585 -24215071 + AT_rich Low_complexity Low_complexity 1 61 0 7 621 26 50 0 0 chrUextra 4789815 4789855 -24214801 + AT_rich Low_complexity Low_complexity 1 40 0 7 621 272 207 23 0 chrUextra 4790250 4790329 -24214327 + PROTOP_A DNA P 43 124 -981 7 621 870 27 0 0 chrUextra 4790517 4790627 -24214029 + ARS406_DM Unknown Unknown 80 189 -164 7 621 3427 191 16 21 chrUextra 4790536 4791420 -24213236 - SAR_DM Satellite Satellite -216 1256 378 7 621 3893 66 13 7 chrUextra 4791523 4792423 -24212233 + HETA LINE telomeric 3870 4338 -1743 7 621 4506 56 2 0 chrUextra 4792524 4793115 -24211541 + ZAM_I LTR Gypsy 1311 1902 -5588 7 621 1314 62 302 0 chrUextra 4793116 4793421 -24211235 + ZAM_I LTR Gypsy 2323 2719 -4771 7 621 28 48 0 0 chrUextra 4793594 4793636 -24211020 + AT_rich Low_complexity Low_complexity 1 42 0 7 621 488 119 36 0 chrUextra 4793909 4793993 -24210663 - NTS_DM Other Other -150 90 4 7 621 1290 12 0 18 chrUextra 4794103 4794268 -24210388 - NTS_DM Other Other -78 162 1 7 621 1112 6 25 19 chrUextra 4794268 4794429 -24210227 - NTS_DM Other Other 0 240 79 7 621 802 284 14 14 chrUextra 4794538 4794820 -24209836 - BS2 LINE Jockey -2142 2579 2298 7 621 4627 47 12 0 chrUextra 4794837 4795432 -24209224 - BS3_DM LINE Jockey -776 1014 413 7 621 1431 0 0 0 chrUextra 4795532 4795691 -24208965 + (CACAA)n Simple_repeat Simple_repeat 5 163 0 7 621 423 100 0 0 chrUextra 4795707 4795777 -24208879 + (TAA)n Simple_repeat Simple_repeat 3 72 0 7 621 2970 17 0 0 chrUextra 4795777 4796133 -24208523 + MDG1_LTR LTR Gypsy 87 442 0 7 621 2599 0 0 0 chrUextra 4796133 4796435 -24208221 + MDG1_I LTR Gypsy 1 302 -6294 7 621 3898 58 19 4 chrUextra 4797539 4798072 -24206584 + R1_DM LINE R1 193 733 -4623 7 621 2893 56 0 0 chrUextra 4798068 4798441 -24206215 + R1_DM LINE R1 1224 1596 -3760 7 621 2429 94 7 52 chrUextra 4798555 4799444 -24205212 + DMSAT6 Satellite Satellite 1 848 0 7 621 537 182 81 51 chrUextra 4799954 4800151 -24204505 + DMCR1A LINE CR1 4227 4429 -41 7 621 21 0 0 0 chrUextra 4800273 4800294 -24204362 + AT_rich Low_complexity Low_complexity 1 21 0 7 621 2231 127 19 31 chrUextra 4800551 4801446 -24203210 - DMSAT6 Satellite Satellite -30 883 1 7 621 3407 190 29 20 chrUextra 4801550 4802453 -24202203 + SAR_DM Satellite Satellite 298 1208 -264 7 621 7613 2 1 2 chrUextra 4803556 4804459 -24200197 + G6_DM LINE Jockey 1024 1925 -117 7 621 2100 172 9 5 chrUextra 4804575 4805461 -24199195 + SAR_DM Satellite Satellite 1 889 -694 7 621 913 291 3 6 chrUextra 4805592 4805910 -24198746 - MICROPIA_I LTR Gypsy -2746 1730 1414 7 621 833 71 79 0 chrUextra 4805908 4806034 -24198622 + Gypsy7_I LTR Gypsy 3199 3334 -1650 7 621 2224 35 10 0 chrUextra 4806035 4806325 -24198331 + Gypsy7_I LTR Gypsy 3615 3907 -1077 7 621 7551 6 24 0 chrUextra 4806563 4807465 -24197191 - STALKER4_I LTR Gypsy -2281 4249 3326 7 621 1065 144 64 5 chrUextra 4807665 4807868 -24196788 + DNAREP1_DM LINE Penelope 22 236 -358 7 621 212 0 0 35 chrUextra 4807920 4807949 -24196707 + (TAA)n Simple_repeat Simple_repeat 2 29 0 7 621 21 0 0 0 chrUextra 4808017 4808038 -24196618 + AT_rich Low_complexity Low_complexity 1 21 0 7 621 7267 30 1 0 chrUextra 4808567 4809469 -24195187 - R1_DM LINE R1 -2334 3022 2120 7 621 1789 81 3 34 chrUextra 4809599 4809893 -24194763 + PROTOP_B DNA P 194 478 -675 7 621 4366 68 0 3 chrUextra 4809870 4810471 -24194185 + HOBO DNA hAT 330 928 -2088 7 621 7464 12 40 0 chrUextra 4810571 4811473 -24193183 - Gypsy6_I LTR Gypsy -3566 3446 2509 7 621 626 40 0 0 chrUextra 4811573 4811674 -24192982 - PROTOP_B DNA P -395 758 658 7 621 29 0 0 0 chrUextra 4811674 4811703 -24192953 + AT_rich Low_complexity Low_complexity 1 29 0 7 621 1274 25 0 0 chrUextra 4811717 4811875 -24192781 - PROTOP_B DNA P -843 310 154 7 621 3664 43 150 5 chrUextra 4811889 4812475 -24192181 + Copia2_I LTR Copia 334 1004 -3158 7 621 21 0 0 0 chrUextra 4812601 4812622 -24192034 + AT_rich Low_complexity Low_complexity 1 21 0 7 621 2583 65 130 134 chrUextra 4812722 4813052 -24191604 + ROO_I LTR Pao 258 640 -7616 7 621 294 106 0 0 chrUextra 4813052 4813099 -24191557 + (CAG)n Simple_repeat Simple_repeat 1 47 0 7 621 2583 63 149 149 chrUextra 4813099 4813477 -24191179 + ROO_I LTR Pao 641 1056 -7200 7 621 297 127 0 98 chrUextra 4813577 4813638 -24191018 - HETRP_DM Satellite Satellite -300 1572 1518 7 621 649 217 0 32 chrUextra 4813755 4813912 -24190744 - HETRP_DM Satellite Satellite -203 1669 1518 7 621 477 217 8 16 chrUextra 4814029 4814151 -24190505 - HETRP_DM Satellite Satellite -203 1669 1549 7 621 192 40 0 0 chrUextra 4814151 4814176 -24190480 + (TC)n Simple_repeat Simple_repeat 2 26 0 7 621 607 200 7 14 chrUextra 4814334 4814476 -24190180 - HETRP_DM Satellite Satellite -203 1669 1529 7 621 281 194 40 0 chrUextra 4815397 4815475 -24189181 + PROTOP_A DNA P 43 124 -981 7 621 7037 27 4 13 chrUextra 4815582 4816482 -24188174 - R1_DM LINE R1 -120 5236 4345 7 621 3781 11 0 0 chrUextra 4816583 4817024 -24187632 - DOC LINE Jockey -4261 464 24 7 621 1811 194 2 2 chrUextra 4817071 4817485 -24187171 - SAR_DM Satellite Satellite -535 937 524 7 621 5757 12 10 0 chrUextra 4817585 4818275 -24186381 + DMRT1A LINE R1 4485 5181 -2 7 621 5216 75 111 21 chrUextra 4818587 4819483 -24185173 + TART_B1 LINE telomeric 3163 4139 -6515 7 621 456 111 0 0 chrUextra 4819589 4819661 -24184995 + FW_DM LINE Jockey 2123 2194 -2498 7 621 2725 147 2 14 chrUextra 4819663 4820152 -24184504 + FW_DM LINE Jockey 2641 3123 -1569 7 621 1373 100 10 39 chrUextra 4820180 4820491 -24184165 - DMSAT6 Satellite Satellite -35 435 134 7 621 2259 96 0 0 chrUextra 4822129 4822495 -24182161 - S_DM DNA Tc1 0 1736 1371 7 621 1847 9 5 0 chrUextra 4822595 4822816 -24181840 - ROO_I LTR Pao -8034 222 1 7 621 3742 2 0 0 chrUextra 4822816 4823244 -24181412 - ROO_LTR LTR Pao 0 428 1 7 621 4933 95 50 86 chrUextra 4823597 4824495 -24180161 + Gypsy12_I LTR Gypsy 956 1821 -3725 7 621 1924 36 7 32 chrUextra 4824599 4824884 -24179772 + BATUMI_I LTR Pao 7007 7284 -679 7 621 4568 32 5 13 chrUextra 4824903 4825500 -24179156 + BATUMI_I LTR Pao 1785 2376 -5587 7 621 7587 2 17 0 chrUextra 4825601 4826503 -24178153 - DM412 LTR Gypsy -3472 3425 2509 7 621 3172 196 32 20 chrUextra 4826603 4827505 -24177151 + SAR_DM Satellite Satellite 59 971 -501 7 621 7615 1 8 2 chrUextra 4827605 4828507 -24176149 + DOC LINE Jockey 1344 2250 -2475 7 621 3375 198 9 18 chrUextra 4828612 4829493 -24175163 - SAR_DM Satellite Satellite -354 1118 246 7 621 272 258 22 0 chrUextra 4829418 4829507 -24175149 + XDMR_DM Unknown Unknown 6 96 -264 7 621 6620 42 9 2 chrUextra 4829612 4830500 -24174156 + DOC2_DM LINE Jockey 747 1640 -3153 7 621 2410 192 51 66 chrUextra 4830611 4831402 -24173254 + SAR_DM Satellite Satellite 298 1076 -396 7 621 382 165 93 0 chrUextra 4831416 4831513 -24173143 + SAR_DM Satellite Satellite 547 652 -820 7 621 7228 20 1 13 chrUextra 4831613 4832515 -24172141 + G2_DM LINE Jockey 140 1030 -2072 7 621 3318 189 20 22 chrUextra 4832615 4833502 -24171154 + SAR_DM Satellite Satellite 380 1264 -208 7 621 823 54 0 0 chrUextra 4833405 4833517 -24171139 - ARS406_DM Unknown Unknown -164 189 78 7 621 7359 21 0 0 chrUextra 4833617 4834519 -24170137 - ACCORD2_I LTR Gypsy -4538 2674 1773 7 621 3766 7 0 2 chrUextra 4834619 4835060 -24169596 + STALKER4_I LTR Gypsy 3801 4240 -2290 7 621 3582 19 83 0 chrUextra 4835052 4835521 -24169135 + STALKER4_I LTR Gypsy 4654 5161 -1369 7 621 1165 97 6 0 chrUextra 4835621 4835797 -24168859 + BS3_DM LINE Jockey 868 1044 -746 7 621 1765 68 0 0 chrUextra 4835787 4836023 -24168633 + BS3_DM LINE Jockey 1311 1546 -244 7 621 3305 84 2 6 chrUextra 4836031 4836523 -24168133 + DM297_I LTR Gypsy 2179 2668 -3499 7 621 3243 197 41 19 chrUextra 4836623 4837520 -24167136 + SAR_DM Satellite Satellite 301 1217 -255 7 621 2428 96 10 34 chrUextra 4837625 4838526 -24166130 - DMSAT6 Satellite Satellite -100 879 1 7 621 501 208 8 16 chrUextra 4838626 4838748 -24165908 - HETRP_DM Satellite Satellite -203 1669 1549 7 621 264 30 0 0 chrUextra 4838748 4838781 -24165875 + (TC)n Simple_repeat Simple_repeat 2 34 0 7 621 681 179 7 14 chrUextra 4838910 4839052 -24165604 - HETRP_DM Satellite Satellite -203 1669 1529 7 621 494 202 16 16 chrUextra 4839203 4839324 -24165332 - HETRP_DM Satellite Satellite -203 1669 1549 7 621 282 29 0 0 chrUextra 4839324 4839359 -24165297 + (TC)n Simple_repeat Simple_repeat 2 36 0 7 621 859 90 0 0 chrUextra 4839627 4839760 -24164896 - ARS406_DM Unknown Unknown -220 133 1 7 621 3433 186 14 14 chrUextra 4839667 4840528 -24164128 + SAR_DM Satellite Satellite 195 1055 -417 7 621 1505 188 148 46 chrUextra 4840725 4841410 -24163246 + Gypsy12_LTR LTR Gypsy 921 1675 -661 7 621 275 209 35 52 chrUextra 4841412 4841528 -24163128 + Gypsy12_LTR LTR Gypsy 1396 1509 -827 7 621 3335 190 44 16 chrUextra 4841634 4842530 -24162126 - SAR_DM Satellite Satellite -396 920 1 7 621 198 0 0 0 chrUextra 4843088 4843110 -24161546 + (TTG)n Simple_repeat Simple_repeat 2 23 0 7 621 2094 42 14 0 chrUextra 4843243 4843531 -24161125 + PROTOP DNA P 232 523 -3957 7 621 303 82 65 16 chrUextra 4843643 4843705 -24160951 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 7 621 7316 16 4 0 chrUextra 4844632 4845533 -24159123 + PROTOP DNA P 2788 3692 -788 7 621 3867 39 18 20 chrUextra 4845633 4846179 -24158477 + BATUMI_I LTR Pao 6457 7001 -962 7 621 2805 12 0 0 chrUextra 4846205 4846534 -24158122 - BATUMI_I LTR Pao -1543 6420 6092 7 621 3594 189 19 25 chrUextra 4846634 4847534 -24157122 + SAR_DM Satellite Satellite 1 894 -208 7 621 3109 198 41 11 chrUextra 4847635 4848536 -24156120 - SAR_DM Satellite Satellite -1045 928 1 7 621 3659 202 8 18 chrUextra 4848639 4849537 -24155119 - SAR_DM Satellite Satellite -435 889 1 7 77 7410 19 13 0 chrUextra 4849637 4850538 -24154118 - R1_DM LINE R1 -2654 2702 1790 7 622 898 37 123 22 chrUextra 4850638 4850773 -24153883 - BATUMI_I LTR Pao -813 7150 7002 7 622 2412 14 0 7 chrUextra 4850773 4851069 -24153587 - BATUMI_I LTR Pao 0 7963 7670 7 622 3666 24 0 13 chrUextra 4851078 4851539 -24153117 - BATUMI_I LTR Pao -1884 6079 5625 7 622 1647 199 38 17 chrUextra 4851639 4852057 -24152599 - HETA LINE telomeric -1635 4446 4020 7 622 27 62 0 0 chrUextra 4852198 4852246 -24152410 + AT_rich Low_complexity Low_complexity 1 48 0 7 622 371 181 75 19 chrUextra 4852291 4852398 -24152258 + Copia_I LTR Copia 4401 4513 -80 7 622 1449 276 31 39 chrUextra 4852649 4853541 -24151115 + SAR_DM Satellite Satellite 1 885 -396 7 622 669 110 0 0 chrUextra 4853641 4853750 -24150906 - ARS406_DM Unknown Unknown -244 109 1 7 622 3490 198 8 9 chrUextra 4853657 4854540 -24150116 + SAR_DM Satellite Satellite 195 1076 -396 7 622 926 27 0 0 chrUextra 4854642 4854753 -24149903 - R1_DM LINE R1 -3 5353 5243 7 622 3989 22 4 0 chrUextra 4854750 4855241 -24149415 - R1_DM LINE R1 -290 5066 4574 7 622 2423 30 7 0 chrUextra 4855238 4855543 -24149113 - R1_DM LINE R1 -1121 4235 3929 7 622 7002 37 27 0 chrUextra 4855643 4856544 -24148112 - R1_DM LINE R1 -1771 3585 2661 7 622 2831 74 22 175 chrUextra 4856910 4857545 -24147111 + CIRCE LINE Composite 4981 5518 -838 7 622 1047 194 4 0 chrUextra 4857645 4857903 -24146753 - ROVER-I_DM LTR Gypsy -336 6248 5990 7 622 3071 166 2 20 chrUextra 4857938 4858546 -24146110 - ROVER-I_DM LTR Gypsy -1276 5308 4712 7 622 3504 184 10 20 chrUextra 4858659 4859543 -24145113 - SAR_DM Satellite Satellite -352 1120 246 7 622 6270 101 0 0 chrUextra 4859650 4860548 -24144108 + Gypsy12_I LTR Gypsy 3502 4399 -1147 7 622 4947 22 16 2 chrUextra 4860648 4861272 -24143384 - G_DM LINE Jockey -3713 633 1 7 622 226 103 25 25 chrUextra 4861345 4861385 -24143271 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 622 246 150 0 0 chrUextra 4861437 4861477 -24143179 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 622 7121 41 8 2 chrUextra 4861650 4862550 -24142106 + BS2 LINE Jockey 2796 3700 -1021 7 622 3150 201 15 20 chrUextra 4862652 4863546 -24141110 + SAR_DM Satellite Satellite 1 889 -208 7 622 5537 68 14 69 chrUextra 4863651 4864552 -24140104 + CIRCE LINE Composite 1380 2231 -4125 7 622 2271 269 41 55 chrUextra 4864653 4865552 -24139104 + Gypsy2_I LTR Gypsy 4183 5069 -1066 7 622 5396 25 0 1 chrUextra 4865652 4866319 -24138337 + FW_DM LINE Jockey 4027 4692 0 7 622 843 54 0 0 chrUextra 4866320 4866431 -24138225 - BATUMI_I LTR Pao -1426 6537 6427 7 622 734 87 0 0 chrUextra 4866437 4866552 -24138104 + BATUMI_I LTR Pao 7298 7412 -551 7 622 7297 21 27 0 chrUextra 4866652 4867552 -24137104 - FW_DM LINE Jockey -3673 1019 96 7 622 21 89 0 0 chrUextra 4867770 4867826 -24136830 + AT_rich Low_complexity Low_complexity 1 56 0 7 622 1590 26 0 10 chrUextra 4868354 4868551 -24136105 - PROTOP DNA P 0 4480 4286 7 622 5118 103 62 29 chrUextra 4868652 4869550 -24135106 - Gypsy12_I LTR Gypsy -4425 1121 194 7 622 1476 48 24 0 chrUextra 4869652 4869862 -24134794 + QUASIMODO_I LTR Gypsy 4960 5174 -886 7 622 995 29 0 0 chrUextra 4869874 4870014 -24134642 + QUASIMODO_I LTR Gypsy 5493 5632 -428 7 622 2400 68 26 9 chrUextra 4870015 4870354 -24134302 + QUASIMODO_LTR LTR Gypsy 314 658 0 7 622 2785 0 6 0 chrUextra 4870652 4870974 -24133682 - ROO_LTR LTR Pao -100 328 5 7 622 386 77 0 44 chrUextra 4870974 4871042 -24133614 + (TAA)n Simple_repeat Simple_repeat 2 66 0 7 622 1343 152 93 13 chrUextra 4871044 4871344 -24133312 + MDG1_LTR LTR Gypsy 89 412 -30 7 622 666 259 14 10 chrUextra 4871345 4871552 -24133104 + BS2 LINE Jockey 2721 2928 -1793 7 622 354 45 0 0 chrUextra 4871951 4871995 -24132661 + (GAGAA)n Simple_repeat Simple_repeat 3 46 0 7 622 3139 183 18 45 chrUextra 4872652 4873552 -24131104 - SAR_DM Satellite Satellite -504 875 1 7 622 1747 75 7 39 chrUextra 4873652 4873931 -24130725 - HETA LINE telomeric -3918 2163 1894 7 622 3006 76 39 149 chrUextra 4873930 4874552 -24130104 - HETA LINE telomeric -4524 1557 1005 7 622 884 90 0 38 chrUextra 4874903 4875087 -24129569 + (TCTTG)n Simple_repeat Simple_repeat 1 177 0 7 622 1336 0 0 53 chrUextra 4875101 4875290 -24129366 + (TCTTG)n Simple_repeat Simple_repeat 2 180 0 7 622 2916 14 0 0 chrUextra 4875654 4875998 -24128658 + R1_DM LINE R1 5013 5356 0 7 622 270 127 77 31 chrUextra 4875998 4876063 -24128593 + DM176_LTR LTR Gypsy 227 294 -213 7 622 245 220 0 0 chrUextra 4876193 4876252 -24128404 + DM176_LTR LTR Gypsy 308 366 -141 7 622 568 164 40 16 chrUextra 4876269 4876393 -24128263 + DMTOM1_LTR LTR Gypsy 284 410 0 7 622 372 86 14 54 chrUextra 4876393 4876458 -24128198 + DMTOM1_LTR LTR Gypsy 349 410 0 7 622 660 68 0 0 chrUextra 4876464 4876552 -24128104 - MDG1_I LTR Gypsy -5818 778 691 7 622 381 159 0 0 chrUextra 4876654 4876723 -24127933 - PROTOP DNA P -453 4027 3959 7 622 237 119 24 0 chrUextra 4876722 4876764 -24127892 - PROTOP DNA P -3565 915 873 7 622 1260 153 8 24 chrUextra 4877295 4877550 -24127106 - PROTOP_B DNA P -4 1149 899 7 622 3233 191 20 13 chrUextra 4878653 4879552 -24125104 + SAR_DM Satellite Satellite 1 905 -208 7 622 1008 103 0 0 chrUextra 4881123 4881547 -24123109 + (TAA)n Simple_repeat Simple_repeat 1 424 0 7 622 6875 29 8 18 chrUextra 4881652 4882552 -24122104 + BATUMI_I LTR Pao 980 1870 -6093 7 622 4395 0 0 0 chrUextra 4882653 4883188 -24121468 - DM176_I LTR Gypsy -475 5945 5411 7 622 3164 0 0 0 chrUextra 4883186 4883552 -24121104 - DM176_I LTR Gypsy -2772 3648 3283 7 622 1401 30 0 0 chrUextra 4883652 4883821 -24120835 + PROTOP DNA P 4278 4446 -34 7 622 1777 45 0 0 chrUextra 4883819 4884040 -24120616 + PROTOP DNA P 4260 4480 0 7 622 26 30 0 0 chrUextra 4884411 4884444 -24120212 + AT_rich Low_complexity Low_complexity 1 33 0 7 622 23 68 0 0 chrUextra 4884490 4884534 -24120122 + AT_rich Low_complexity Low_complexity 1 44 0 7 622 26 30 0 0 chrUextra 4885043 4885076 -24119580 + AT_rich Low_complexity Low_complexity 1 33 0 7 622 23 68 0 0 chrUextra 4885122 4885166 -24119490 + AT_rich Low_complexity Low_complexity 1 44 0 7 622 4499 26 0 0 chrUextra 4885652 4886197 -24118459 - R1_DM LINE R1 -669 4687 4143 7 622 2920 8 3 3 chrUextra 4886200 4886552 -24118104 - R1_DM LINE R1 -1469 3887 3536 7 622 7014 22 77 0 chrUextra 4886652 4887552 -24117104 - R1_DM LINE R1 -1768 3588 2620 7 622 3193 90 59 19 chrUextra 4887652 4888174 -24116482 - BS LINE Jockey -4575 551 9 7 622 508 122 100 0 chrUextra 4889347 4889437 -24115219 + DNAREP1_DM LINE Penelope 496 594 0 7 622 33 25 0 0 chrUextra 4889491 4889531 -24115125 + AT_rich Low_complexity Low_complexity 1 40 0 7 622 1632 94 8 24 chrUextra 4889652 4889902 -24114754 - TART LINE telomeric -8909 5568 5323 7 622 1906 143 3 18 chrUextra 4889882 4890223 -24114433 - TART LINE telomeric -10594 3883 3548 7 622 1310 6 90 0 chrUextra 4890221 4890377 -24114279 - PROTOP_B DNA P -983 170 1 7 622 3211 26 0 30 chrUextra 4890652 4891050 -24113606 - CIRCE LINE Composite -3547 2809 2424 7 622 4319 20 0 0 chrUextra 4891050 4891552 -24113104 - PROTOP_A DNA P 0 1105 604 7 622 7943 18 2 0 chrUextra 4891652 4892551 -24112105 - MAX_I LTR Pao -1311 6603 5703 7 622 5327 23 49 1 chrUextra 4892652 4893308 -24111348 - R1_DM LINE R1 -1179 4177 3491 7 622 1985 33 0 0 chrUextra 4893310 4893550 -24111106 - R1_DM LINE R1 -2388 2968 2729 7 622 843 325 4 1 chrUextra 4893656 4893991 -24110665 + Gypsy_DS LTR Gypsy 5499 5791 -1731 7 622 823 335 59 30 chrUextra 4894003 4894529 -24110127 + GTWIN_I LTR Gypsy 5578 6118 -303 7 622 3012 3 0 0 chrUextra 4894652 4894984 -24109672 + QUASIMODO_LTR LTR Gypsy 327 658 0 7 622 2794 5 100 0 chrUextra 4894984 4895552 -24109104 + QUASIMODO_I LTR Gypsy 1 625 -5435 7 622 4315 0 0 11 chrUextra 4895655 4896133 -24108523 + HOBO DNA hAT 2544 3016 0 7 622 5603 5 0 9 chrUextra 4896652 4897302 -24107354 + DOC LINE Jockey 4079 4722 -3 7 622 1272 154 12 8 chrUextra 4897302 4897551 -24107105 + SAR_DM Satellite Satellite 334 583 -889 7 622 514 28 0 141 chrUextra 4898098 4898304 -24106352 + T-rich Low_complexity Low_complexity 4 180 0 7 622 524 28 0 137 chrUextra 4898316 4898521 -24106135 + T-rich Low_complexity Low_complexity 4 180 0 7 622 996 17 9 0 chrUextra 4899188 4899304 -24105352 + DMRT1A LINE R1 346 462 -4721 7 622 1921 20 172 0 chrUextra 4899308 4899552 -24105104 - DMRT1A LINE R1 -2537 2646 2361 7 622 386 59 0 0 chrUextra 4899744 4899795 -24104861 + Transib5 DNA Transib 5 55 -2946 7 622 3546 26 76 46 chrUextra 4899793 4900319 -24104337 + Transib5 DNA Transib 181 722 -2279 7 622 2005 29 0 4 chrUextra 4900306 4900551 -24104105 + Transib5 DNA Transib 2099 2342 -659 7 622 3764 199 5 20 chrUextra 4900651 4901547 -24103109 + SAR_DM Satellite Satellite 209 1090 -382 7 622 5937 88 9 11 chrUextra 4901650 4902549 -24102107 - BATUMI_I LTR Pao -3366 4548 3592 7 622 6841 57 29 0 chrUextra 4902649 4903548 -24101108 - IDEFIX_I LTR Gypsy -4155 1473 549 7 622 7819 11 6 1 chrUextra 4903648 4904547 -24100109 - STALKER4_I LTR Gypsy -1545 4985 4083 7 622 2661 159 10 8 chrUextra 4904648 4905541 -24099115 - SAR_DM Satellite Satellite -620 894 1 7 622 6094 19 93 0 chrUextra 4905646 4906545 -24098111 - ROO_I LTR Pao -1148 7108 6126 7 622 5203 10 1 3 chrUextra 4906645 4907544 -24097112 + DOC LINE Jockey 3171 4143 -582 7 622 2177 29 117 0 chrUextra 4907644 4908090 -24096566 + R1_DM LINE R1 4194 4691 -665 7 622 1618 59 0 5 chrUextra 4908080 4908286 -24096370 + R1_DM LINE R1 5034 5238 -118 7 622 1364 62 0 17 chrUextra 4908269 4908450 -24096206 + R1_DM LINE R1 224 401 -4955 7 622 616 85 0 0 chrUextra 4908461 4908543 -24096113 + R1_DM LINE R1 721 802 -4554 7 622 647 141 25 8 chrUextra 4908695 4908817 -24095839 - STALKER4_I LTR Gypsy -5649 881 758 7 622 1208 170 89 72 chrUextra 4908881 4909242 -24095414 - ROVER-LTR_DM LTR Gypsy 0 367 1 7 622 7596 11 0 11 chrUextra 4909642 4910541 -24094115 + QUASIMODO_I LTR Gypsy 1259 2147 -3913 7 622 3292 3 0 0 chrUextra 4910641 4911001 -24093655 + ROO_LTR LTR Pao 69 428 0 7 622 226 0 0 0 chrUextra 4911001 4911032 -24093624 + NTS_DM Other Other 103 133 -107 7 622 1304 18 0 6 chrUextra 4911032 4911197 -24093459 + NTS_DM Other Other 38 201 -39 7 622 907 9 0 27 chrUextra 4911249 4911361 -24093295 + NTS_DM Other Other 25 133 -107 7 622 1264 30 0 6 chrUextra 4911361 4911526 -24093130 + NTS_DM Other Other 38 201 -39 7 622 888 266 78 28 chrUextra 4911651 4912046 -24092610 - G_DM LINE Jockey -3559 787 373 7 622 247 62 0 0 chrUextra 4912277 4912309 -24092347 + NTS_DM Other Other 2 33 -207 7 622 21 0 0 0 chrUextra 4912325 4912346 -24092310 + AT_rich Low_complexity Low_complexity 1 21 0 7 622 291 131 16 16 chrUextra 4912644 4912706 -24091950 + DM297_I LTR Gypsy 3159 3220 -2947 7 622 416 252 17 17 chrUextra 4912678 4912795 -24091861 + DM297_I LTR Gypsy 3378 3494 -2673 7 622 2601 258 15 12 chrUextra 4912795 4913537 -24091119 + TOM_I LTR Gypsy 4557 5300 -812 7 622 4306 57 12 12 chrUextra 4913638 4914220 -24090436 - MDG1_I LTR Gypsy -614 5982 5401 7 622 2343 52 19 6 chrUextra 4914225 4914537 -24090119 - DM297_I LTR Gypsy -1816 4351 4036 7 622 3912 178 11 11 chrUextra 4914637 4915509 -24089147 + SAR_DM Satellite Satellite 205 1076 -396 7 622 3621 186 17 24 chrUextra 4915636 4916519 -24088137 - SAR_DM Satellite Satellite -270 1202 326 7 622 51 31 0 0 chrUextra 4916692 4916757 -24087899 + AT_rich Low_complexity Low_complexity 1 65 0 7 622 220 141 46 15 chrUextra 4917251 4917316 -24087340 + (TTA)n Simple_repeat Simple_repeat 2 68 0 7 622 21 0 0 0 chrUextra 4918376 4918397 -24086259 + AT_rich Low_complexity Low_complexity 1 21 0 7 622 4538 21 2 0 chrUextra 4918633 4919161 -24085495 - PROTOP_A DNA P -576 529 1 7 622 7560 20 4 4 chrUextra 4919632 4920531 -24084125 + ROO_I LTR Pao 924 1822 -6434 7 622 5358 152 18 2 chrUextra 4920631 4921530 -24083126 + HETA LINE telomeric 1337 2249 -3832 7 622 1446 23 0 0 chrUextra 4921630 4921802 -24082854 - Stalker3_LTR LTR Gypsy -200 172 1 7 622 6509 7 0 1 chrUextra 4921802 4922529 -24082127 - Gypsy4_I LTR Gypsy -3995 2293 1568 7 622 3629 192 16 24 chrUextra 4922629 4923515 -24081141 - SAR_DM Satellite Satellite -224 1248 370 7 622 1073 269 9 9 chrUextra 4923628 4923944 -24080712 + Gypsy6_I LTR Gypsy 6552 6840 -172 7 622 254 286 0 0 chrUextra 4923928 4923998 -24080658 + Gypsy2_I LTR Gypsy 5975 6044 -91 7 622 272 175 117 58 chrUextra 4924012 4924115 -24080541 + Gypsy2_LTR LTR Gypsy 95 203 -150 7 622 337 193 0 35 chrUextra 4924238 4924324 -24080332 + DNAREP1_DM LINE Penelope 486 568 -26 7 622 1024 62 69 0 chrUextra 4924343 4924503 -24080153 - S2_DM DNA Tc1 -1564 171 1 7 622 3768 185 18 19 chrUextra 4924632 4925526 -24079130 - SAR_DM Satellite Satellite -478 893 1 7 622 1234 7 0 0 chrUextra 4925626 4925767 -24078889 - NTS_DM Other Other -99 141 1 7 622 1926 4 17 13 chrUextra 4925767 4926006 -24078650 - NTS_DM Other Other 0 240 1 7 622 1557 10 20 15 chrUextra 4926006 4926208 -24078448 - NTS_DM Other Other 0 240 38 7 622 1148 15 0 0 chrUextra 4926208 4926341 -24078315 - NTS_DM Other Other -107 133 1 7 622 1274 22 22 22 chrUextra 4926341 4926525 -24078131 - NTS_DM Other Other 0 240 57 7 622 1436 53 0 36 chrUextra 4926625 4926821 -24077835 - Baggins1 LINE LOA -2532 2921 2733 7 622 2529 35 82 0 chrUextra 4927205 4927524 -24077132 - Baggins1 LINE LOA 0 5453 5109 7 622 2565 54 12 9 chrUextra 4927897 4928234 -24076422 - DMRT1A LINE R1 -11 5172 4835 7 622 2624 23 0 0 chrUextra 4928215 4928521 -24076135 + Transib5 DNA Transib 997 1302 -1699 7 622 771 11 0 0 chrUextra 4928623 4928712 -24075944 - Gypsy4_LTR LTR Gypsy -198 89 1 7 622 1373 111 71 158 chrUextra 4928821 4929143 -24075513 + HOBO DNA hAT 23 316 -2700 7 622 1793 101 190 18 chrUextra 4929144 4929522 -24075134 + PROTOP_B DNA P 17 459 -694 7 622 795 50 0 0 chrUextra 4929624 4929723 -24074933 + ARS406_DM Unknown Unknown 91 189 -164 7 622 3861 182 15 19 chrUextra 4929642 4930521 -24074135 - SAR_DM Satellite Satellite -225 1247 373 7 622 1767 71 20 26 chrUextra 4930621 4930937 -24073719 - HETA LINE telomeric -5514 567 1 7 622 3040 145 7 19 chrUextra 4930940 4931482 -24073174 - TAHRE LINE telomeric -13 10450 9915 7 622 704 314 29 17 chrUextra 4931624 4931968 -24072688 + Gypsy4_I LTR Gypsy 3126 3473 -2815 7 622 537 16 0 0 chrUextra 4932619 4932681 -24071975 + PROTOP_B DNA P 1092 1153 0 7 622 3811 26 0 26 chrUextra 4932681 4933147 -24071509 + CIRCE LINE Composite 2424 2877 -3479 7 622 2793 36 5 42 chrUextra 4933138 4933517 -24071139 + CIRCE LINE Composite 1908 2272 -4084 7 622 248 0 0 0 chrUextra 4933617 4933644 -24071012 + Invader4_LTR LTR Gypsy 320 346 0 7 622 228 190 84 52 chrUextra 4933843 4933998 -24070658 + (CTATT)n Simple_repeat Simple_repeat 5 164 0 7 622 295 177 88 35 chrUextra 4934307 4934477 -24070179 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 7 622 215 313 0 0 chrUextra 4934408 4934507 -24070149 + T-rich Low_complexity Low_complexity 1 99 0 7 622 3945 178 9 11 chrUextra 4934615 4935496 -24069160 + SAR_DM Satellite Satellite 198 1076 -396 7 622 1206 21 0 0 chrUextra 4935948 4936093 -24068563 + (TATTG)n Simple_repeat Simple_repeat 2 146 0 7 622 7371 25 0 1 chrUextra 4936611 4937509 -24067147 - MDG3_I LTR Gypsy -2823 2163 1267 7 622 2138 12 39 4 chrUextra 4937609 4937867 -24066789 + QUASIMODO_LTR LTR Gypsy 392 658 0 7 622 2753 62 106 87 chrUextra 4937884 4938131 -24066525 + BATUMI_I LTR Pao 603 867 -7096 7 622 293 0 27 0 chrUextra 4938131 4938168 -24066488 + (TTAA)n Simple_repeat Simple_repeat 1 38 0 7 622 2753 62 106 87 chrUextra 4938168 4938507 -24066149 + BATUMI_I LTR Pao 868 1199 -6764 7 622 3551 202 26 10 chrUextra 4938608 4939499 -24065157 - SAR_DM Satellite Satellite -242 1230 326 7 622 7665 20 47 0 chrUextra 4939605 4940503 -24064153 + MAX_I LTR Pao 3018 3957 -3957 7 622 4275 13 0 10 chrUextra 4940603 4941501 -24063155 + DOC LINE Jockey 2372 3526 -1199 7 622 7650 25 0 1 chrUextra 4941601 4942498 -24062158 - R1_DM LINE R1 -2146 3210 2315 7 622 3796 183 27 19 chrUextra 4942599 4943496 -24061160 + SAR_DM Satellite Satellite 256 1159 -313 7 622 1705 5 0 0 chrUextra 4944595 4944786 -24059870 - MICROPIA_LTR LTR Gypsy -54 422 232 7 622 2125 4 0 0 chrUextra 4944815 4945047 -24059609 - MICROPIA_LTR LTR Gypsy -244 232 1 7 622 3862 11 20 2 chrUextra 4945047 4945493 -24059163 - MICROPIA_I LTR Gypsy 0 4476 4023 7 622 4461 73 19 5 chrUextra 4945593 4946222 -24058434 - BATUMI_I LTR Pao -23 7940 7303 7 622 2001 32 12 0 chrUextra 4946245 4946491 -24058165 + BATUMI_I LTR Pao 6427 6675 -1288 7 622 2680 67 0 3 chrUextra 4946591 4946941 -24057715 + IDEFIX_I LTR Gypsy 3836 4184 -1444 7 622 1111 15 0 0 chrUextra 4946941 4947071 -24057585 + IDEFIX_LTR LTR Gypsy 1 130 -464 7 622 615 35 0 11 chrUextra 4947069 4947157 -24057499 + IDEFIX_LTR LTR Gypsy 508 594 0 7 622 436 55 19 0 chrUextra 4947157 4947229 -24057427 + MDG1_I LTR Gypsy 6543 6596 0 7 622 299 200 69 23 chrUextra 4947220 4947307 -24057349 + TABOR_LTR LTR Gypsy 1 91 -415 7 622 6509 102 32 0 chrUextra 4947589 4948487 -24056169 - Gypsy12_I LTR Gypsy -2141 3405 2479 7 622 3333 192 18 20 chrUextra 4948589 4948620 -24056036 + SAR_DM Satellite Satellite 1 34 -1413 7 622 837 40 0 0 chrUextra 4948620 4948720 -24055936 - ARS406_DM Unknown Unknown -164 189 90 7 622 3333 192 18 20 chrUextra 4948720 4949481 -24055175 + SAR_DM Satellite Satellite 35 889 -558 7 622 299 51 0 0 chrUextra 4949585 4949624 -24055032 + ARS406_DM Unknown Unknown 120 158 -195 7 622 2016 185 6 8 chrUextra 4949621 4950466 -24054190 - SAR_DM Satellite Satellite -558 843 1 7 622 4787 4 0 0 chrUextra 4950583 4951113 -24053543 - DM297_I LTR Gypsy -625 5542 5013 7 622 3341 8 0 0 chrUextra 4951111 4951481 -24053175 - DM297_I LTR Gypsy -1837 4330 3961 7 622 7923 17 0 2 chrUextra 4951581 4952479 -24052177 + R2_DM LINE R2 392 1287 -2320 7 622 4073 187 7 18 chrUextra 4952579 4953472 -24051184 + SAR_DM Satellite Satellite 208 1090 -382 7 622 671 236 165 52 chrUextra 4953578 4954112 -24050544 + Gypsy12_LTR LTR Gypsy 1451 1989 -291 7 622 23 0 0 0 chrUextra 4954287 4954310 -24050346 + AT_rich Low_complexity Low_complexity 1 23 0 7 622 500 149 211 0 chrUextra 4954361 4954475 -24050181 - DNAREP1_DM LINE Penelope -378 216 79 7 622 444 252 112 19 chrUextra 4954575 4954781 -24049875 + TAHRE LINE telomeric 9865 10089 -374 7 622 574 115 80 0 chrUextra 4954781 4954894 -24049762 + TART LINE telomeric 10370 10491 -3986 7 622 34 24 0 0 chrUextra 4954905 4954946 -24049710 + AT_rich Low_complexity Low_complexity 1 41 0 7 622 2429 120 14 35 chrUextra 4955573 4956471 -24048185 - DMSAT6 Satellite Satellite -1 879 1 7 622 2053 158 12 10 chrUextra 4956571 4957469 -24047187 - SAR_DM Satellite Satellite -700 899 1 7 622 3113 30 0 3 chrUextra 4957569 4957940 -24046716 - STALKER4_I LTR Gypsy -1186 5344 4975 7 622 2495 115 12 14 chrUextra 4957939 4958452 -24046204 + DMSAT6 Satellite Satellite 1 511 -97 7 622 248 239 56 22 chrUextra 4958762 4958852 -24045804 - DNAREP1_DM LINE Penelope -501 93 1 7 622 242 200 0 183 chrUextra 4959359 4959463 -24045193 + ACCORD2_LTR LTR Gypsy 1 85 -130 7 622 993 80 0 0 chrUextra 4959565 4959703 -24044953 - ARS406_DM Unknown Unknown -215 138 1 7 622 4155 173 12 12 chrUextra 4959597 4960462 -24044194 + SAR_DM Satellite Satellite 180 1044 -428 7 622 3715 172 10 14 chrUextra 4960563 4961348 -24043308 + SAR_DM Satellite Satellite 212 993 -479 7 622 551 104 62 0 chrUextra 4961365 4961461 -24043195 + SAR_DM Satellite Satellite 326 427 -1045 7 622 5139 19 0 13 chrUextra 4961561 4962186 -24042470 - Invader2_I LTR Gypsy -1108 3484 2868 7 622 2213 25 0 7 chrUextra 4962182 4962459 -24042197 - Invader2_I LTR Gypsy -1199 3393 3119 7 622 5507 41 3 14 chrUextra 4962762 4963457 -24041199 - R1_DM LINE R1 -4037 1319 633 7 622 1620 3 0 5 chrUextra 4963557 4963932 -24040724 + (GAGAA)n Simple_repeat Simple_repeat 1 372 0 7 622 4533 14 0 2 chrUextra 4963938 4964450 -24040206 - HETA LINE telomeric 0 6081 5571 7 622 512 120 98 0 chrUextra 4964919 4965011 -24039645 - NTS_DM Other Other -136 104 4 7 622 1348 37 0 0 chrUextra 4965122 4965284 -24039372 - NTS_DM Other Other -78 162 1 7 622 1047 26 26 26 chrUextra 4965284 4965439 -24039217 - NTS_DM Other Other 0 240 86 7 622 990 23 69 0 chrUextra 4965553 4965684 -24038972 - DOC LINE Jockey -4582 143 4 7 622 6681 9 33 0 chrUextra 4965695 4966450 -24038206 - DOC2_DM LINE Jockey -2176 2617 1838 7 622 4036 191 11 18 chrUextra 4966550 4967447 -24037209 + SAR_DM Satellite Satellite 267 1157 -315 7 622 438 138 0 65 chrUextra 4967547 4967671 -24036985 + CT-rich Low_complexity Low_complexity 4 119 0 7 622 859 203 32 0 chrUextra 4967674 4967861 -24036795 - Gypsy5_I LTR Gypsy -1953 4556 4364 7 622 3007 195 9 5 chrUextra 4967871 4968444 -24036212 - Gypsy5_I LTR Gypsy -2612 3897 3323 7 622 2620 106 14 12 chrUextra 4968544 4969441 -24035215 + DMSAT6 Satellite Satellite 1 899 -6 7 622 4495 4 0 0 chrUextra 4969541 4970024 -24034632 - TABOR_LTR LTR Gypsy -23 483 1 7 622 2832 13 0 0 chrUextra 4970121 4970438 -24034218 + MAX_I LTR Pao 4879 5195 -2719 7 622 3124 8 0 45 chrUextra 4970538 4970918 -24033738 - ACCORD2_I LTR Gypsy -6849 363 1 7 622 1920 9 0 18 chrUextra 4970918 4971137 -24033519 - ACCORD2_LTR LTR Gypsy 0 215 1 7 622 2702 19 19 0 chrUextra 4971137 4971435 -24033221 - R1_DM LINE R1 -2931 2425 2122 7 622 2640 10 0 0 chrUextra 4971535 4971829 -24032827 - R1_DM LINE R1 -1037 4319 4026 7 622 5189 32 5 0 chrUextra 4971831 4972432 -24032224 - R1_DM LINE R1 -1679 3677 3074 7 622 2657 0 0 7 chrUextra 4972532 4972834 -24031822 - ACCORD_LTR LTR Gypsy -258 300 1 7 622 5153 21 2 8 chrUextra 4972834 4973429 -24031227 - R1_DM LINE R1 -2231 3125 2535 7 622 6935 53 32 3 chrUextra 4973529 4974426 -24030230 - R1_DM LINE R1 -4232 1124 202 7 622 1472 284 57 30 chrUextra 4974526 4975421 -24029235 - STALKER4_I LTR Gypsy -2897 3633 2715 7 622 22 0 0 0 chrUextra 4975844 4975866 -24028790 + AT_rich Low_complexity Low_complexity 1 22 0 7 622 1497 95 41 35 chrUextra 4976523 4976840 -24027816 + DMSAT6 Satellite Satellite 106 424 -46 7 622 2970 145 2 14 chrUextra 4976866 4977357 -24027299 - FW_DM LINE Jockey -1567 3125 2641 7 622 340 138 17 0 chrUextra 4977359 4977417 -24027239 - FW_DM LINE Jockey -2498 2194 2136 7 622 7685 28 2 5 chrUextra 4977517 4978414 -24026242 + R1_DM LINE R1 4093 4987 -369 7 622 7293 47 27 5 chrUextra 4978514 4979411 -24025245 + IDEFIX_I LTR Gypsy 1066 1982 -3646 7 622 3470 198 26 28 chrUextra 4979511 4980407 -24024249 + SAR_DM Satellite Satellite 65 958 -514 7 77 1620 30 0 0 chrUextra 4980526 4980890 -24023766 + (TAGA)n Simple_repeat Simple_repeat 1 364 0 7 623 1191 94 0 0 chrUextra 4980893 4981170 -24023486 + (CTAG)n Simple_repeat Simple_repeat 1 277 0 7 623 1402 0 11 17 chrUextra 4981170 4981350 -24023306 + (CATAG)n Simple_repeat Simple_repeat 1 180 0 7 623 477 0 0 0 chrUextra 4981352 4981405 -24023251 + (CTAG)n Simple_repeat Simple_repeat 3 55 0 7 623 3875 49 19 10 chrUextra 4981505 4982018 -24022638 - R1_DM LINE R1 -4225 1131 614 7 623 2859 63 5 5 chrUextra 4982034 4982402 -24022254 - R1_DM LINE R1 -4947 409 42 7 623 4438 20 0 0 chrUextra 4982502 4983000 -24021656 + R1_DM LINE R1 4859 5356 0 7 623 1360 7 0 0 chrUextra 4982998 4983146 -24021510 + LSU-rRNA_Dme rRNA rRNA 2640 2787 -1113 7 623 2151 16 0 0 chrUextra 4983155 4983399 -24021257 + R2_DM LINE R2 374 617 -2990 7 623 3810 189 47 17 chrUextra 4983510 4984389 -24020267 + SAR_DM Satellite Satellite 326 1230 -242 7 623 2441 19 193 0 chrUextra 4984496 4984567 -24020089 + TART LINE telomeric 7652 7722 -6755 7 623 509 55 0 14 chrUextra 4984567 4984641 -24020015 + (TAAAG)n Simple_repeat Simple_repeat 3 75 0 7 623 2441 19 193 0 chrUextra 4984641 4984890 -24019766 + TART LINE telomeric 7723 8032 -6445 7 623 3973 60 2 0 chrUextra 4984890 4985391 -24019265 + TART LINE telomeric 5436 5937 -8540 7 623 2818 70 0 0 chrUextra 4985493 4985851 -24018805 + BS3_DM LINE Jockey 59 416 -1374 7 623 1601 69 10 0 chrUextra 4985847 4986050 -24018606 + BS3_DM LINE Jockey 526 730 -1060 7 623 729 34 0 0 chrUextra 4986062 4986151 -24018505 + BS3_DM LINE Jockey 1458 1546 -244 7 623 1699 84 4 4 chrUextra 4986150 4986390 -24018266 + DM297_I LTR Gypsy 2179 2418 -3749 7 623 2191 50 7 3 chrUextra 4986490 4986764 -24017892 + Gypsy6A_LTR LTR Gypsy 143 420 0 7 623 3700 52 27 114 chrUextra 4986764 4987387 -24017269 + Gypsy6_I LTR Gypsy 1 569 -6443 7 623 446 314 27 37 chrUextra 4987487 4987779 -24016877 + MICROPIA_I LTR Gypsy 424 710 -3389 7 623 502 317 13 9 chrUextra 4987988 4988214 -24016442 + MICROPIA_I LTR Gypsy 907 1133 -3343 7 623 663 275 6 6 chrUextra 4988211 4988383 -24016273 + Invader6_I LTR Gypsy 1708 1879 -2220 7 623 4190 137 50 39 chrUextra 4988484 4989378 -24015278 - HETA LINE telomeric -522 5559 4656 7 623 3246 129 8 13 chrUextra 4989479 4990004 -24014652 + TAHRE LINE telomeric 9934 10455 -8 7 623 2156 147 14 8 chrUextra 4990004 4990375 -24014281 + TART_B1 LINE telomeric 879 1251 -9403 7 623 3959 58 18 170 chrUextra 4990487 4991371 -24013285 - BATUMI_I LTR Pao -7010 953 204 7 623 1399 107 22 41 chrUextra 4991473 4991788 -24012868 - DM412 LTR Gypsy -316 255 1 7 623 4011 57 17 17 chrUextra 4991829 4992367 -24012289 - DM412 LTR Gypsy -357 6540 6003 7 623 1544 0 0 0 chrUextra 4992470 4992636 -24012020 + NOMAD_I LTR Gypsy 6407 6572 0 7 623 4800 0 0 0 chrUextra 4992636 4993154 -24011502 + NOMAD_LTR LTR Gypsy 1 518 0 7 623 1930 0 0 0 chrUextra 4993154 4993363 -24011293 - ROO_I LTR Pao -3543 4713 4505 7 623 5329 15 63 0 chrUextra 4993463 4994309 -24010347 - MICROPIA_I LTR Gypsy -3577 899 1 7 623 406 20 0 20 chrUextra 4994309 4994359 -24010297 - MICROPIA_LTR LTR Gypsy 0 476 428 7 623 1795 317 42 11 chrUextra 4994461 4995347 -24009309 - MICROPIA_I LTR Gypsy -1837 2639 1761 7 623 3997 185 16 19 chrUextra 4995459 4996351 -24008305 - SAR_DM Satellite Satellite -242 1230 342 7 623 3300 17 0 0 chrUextra 4996451 4996812 -24007844 - TABOR_LTR LTR Gypsy -145 361 1 7 623 3671 27 1 21 chrUextra 4996810 4997347 -24007309 - TABOR_I LTR Gypsy 0 6336 5690 7 623 3191 120 29 17 chrUextra 4997450 4997974 -24006682 - DOC LINE Jockey -49 4676 4147 7 623 46 0 0 0 chrUextra 4998008 4998054 -24006602 + AT_rich Low_complexity Low_complexity 1 46 0 7 623 1786 45 5 0 chrUextra 4998072 4998292 -24006364 + S2_DM DNA Tc1 748 968 -767 7 623 348 60 60 0 chrUextra 4998293 4998343 -24006313 - IDEFIX_LTR LTR Gypsy -253 341 289 7 623 2073 0 0 0 chrUextra 4998443 4998679 -24005977 + G_DM LINE Jockey 4108 4343 -3 7 623 254 186 0 0 chrUextra 4998759 4998802 -24005854 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2578 7 623 240 216 0 19 chrUextra 4998851 4998903 -24005753 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 7 623 3414 0 0 0 chrUextra 4998964 4999339 -24005317 + G_DM LINE Jockey 1 375 -3971 7 623 5101 14 0 0 chrUextra 4999439 5000000 -24004656 + Gypsy2_I LTR Gypsy 3073 3633 -2502 7 623 2880 24 0 0 chrUextra 5000000 5000335 -24004321 + Gypsy2_I LTR Gypsy 3634 3968 -2167 7 623 3769 195 12 8 chrUextra 5000454 5001311 -24003345 - SAR_DM Satellite Satellite -418 1054 195 7 623 695 124 0 0 chrUextra 5001218 5001331 -24003325 + ARS406_DM Unknown Unknown 1 113 -240 7 623 279 125 236 0 chrUextra 5002479 5002623 -24002033 + (TTTAG)n Simple_repeat Simple_repeat 1 178 0 7 623 4488 12 0 11 chrUextra 5002629 5003323 -24001333 + DM412 LTR Gypsy 1 519 -6378 7 623 7584 35 0 0 chrUextra 5003423 5004319 -24000337 - S_DM DNA Tc1 -557 1179 284 7 623 3651 18 9 0 chrUextra 5004419 5004873 -23999783 - PROTOP DNA P -251 4229 3772 7 623 3767 18 5 0 chrUextra 5004870 5005311 -23999345 - PROTOP DNA P -3182 1298 856 7 623 902 96 0 0 chrUextra 5005415 5005551 -23999105 - ARS406_DM Unknown Unknown -217 136 1 7 623 3856 190 9 9 chrUextra 5005432 5006310 -23998346 + SAR_DM Satellite Satellite 167 1044 -428 7 623 23 0 0 0 chrUextra 5006539 5006562 -23998094 + AT_rich Low_complexity Low_complexity 1 23 0 7 623 186 43 0 0 chrUextra 5006846 5006869 -23997787 + (TAAAAA)n Simple_repeat Simple_repeat 1 23 0 7 623 530 309 84 37 chrUextra 5006902 5007305 -23997351 + TV1I LTR Gypsy 417 838 -5125 7 623 768 60 0 0 chrUextra 5007407 5007507 -23997149 + ARS406_DM Unknown Unknown 88 187 -166 7 623 3804 182 16 19 chrUextra 5007420 5008303 -23996353 - SAR_DM Satellite Satellite -217 1255 376 7 623 3952 191 15 18 chrUextra 5008407 5009299 -23995357 + SAR_DM Satellite Satellite 1 889 -203 7 623 2481 166 10 14 chrUextra 5009399 5010295 -23994361 - SAR_DM Satellite Satellite -458 892 1 7 623 1315 190 93 20 chrUextra 5010399 5010753 -23993903 + Gypsy12_LTR LTR Gypsy 1154 1533 -803 7 623 3620 114 37 0 chrUextra 5010755 5011291 -23993365 + Gypsy12_I LTR Gypsy 1779 2334 -3212 7 623 649 26 13 0 chrUextra 5011391 5011467 -23993189 - Gypsy4_I LTR Gypsy -3922 2366 2290 7 623 2956 9 63 0 chrUextra 5011467 5011615 -23993041 - Stalker3_LTR LTR Gypsy 0 372 225 7 623 207 0 0 0 chrUextra 5011615 5011638 -23993018 + (CTTAT)n Simple_repeat Simple_repeat 2 24 0 7 623 2956 9 63 0 chrUextra 5011638 5011839 -23992817 - Stalker3_LTR LTR Gypsy -148 224 2 7 623 3874 7 2 7 chrUextra 5011839 5012287 -23992369 - Gypsy4_I LTR Gypsy -3995 2293 1848 7 623 441 92 195 0 chrUextra 5012390 5012477 -23992179 - DMCR1A LINE CR1 -243 4227 4124 7 623 622 79 11 11 chrUextra 5012466 5012556 -23992100 - DMCR1A LINE CR1 -761 3709 3620 7 623 864 291 21 13 chrUextra 5012555 5012941 -23991715 - HMSBEAGLE_I LTR Gypsy -3032 3497 3109 7 623 7264 19 94 0 chrUextra 5014378 5015273 -23989383 + FW_DM LINE Jockey 3240 4218 -474 7 623 7556 9 41 6 chrUextra 5015373 5016260 -23988396 + MICROPIA_I LTR Gypsy 2958 3875 -601 7 623 6764 25 28 0 chrUextra 5016381 5017179 -23987477 + G2_DM LINE Jockey 638 1457 -1645 7 623 639 47 0 0 chrUextra 5017177 5017263 -23987393 - G2_DM LINE Jockey -75 3027 2942 7 623 262 119 24 0 chrUextra 5017376 5017418 -23987238 - NTS_DM Other Other -191 49 7 7 623 1091 134 20 5 chrUextra 5017455 5017657 -23986999 - NTS_DM Other Other -35 205 1 7 623 225 183 45 68 chrUextra 5017657 5017745 -23986911 - NTS_DM Other Other 0 240 155 7 623 1179 124 30 22 chrUextra 5017796 5018027 -23986629 - NTS_DM Other Other 0 240 8 7 623 285 85 43 0 chrUextra 5018123 5018170 -23986486 - NTS_DM Other Other -191 49 1 7 623 272 88 0 17 chrUextra 5018200 5018258 -23986398 - NTS_DM Other Other -67 173 117 7 623 7958 0 1 0 chrUextra 5018358 5019253 -23985403 - ACCORD_I LTR Gypsy -1375 4913 4018 7 623 1438 150 37 138 chrUextra 5019353 5019862 -23984794 + TART LINE telomeric 7043 7421 -3042 7 623 1668 177 43 18 chrUextra 5019856 5020248 -23984408 + TART LINE telomeric 9178 9579 -4898 7 623 277 348 0 0 chrUextra 5020582 5020717 -23983939 - Invader3_I LTR Gypsy -695 4193 4059 7 623 242 322 0 0 chrUextra 5021109 5021199 -23983457 - BLASTOPIA_I LTR Gypsy -1746 2735 2646 7 623 3373 20 2 0 chrUextra 5021343 5021744 -23982912 - STALKER4_I LTR Gypsy -3995 2535 2134 7 623 4231 14 0 6 chrUextra 5021740 5022238 -23982418 - STALKER4_I LTR Gypsy -1546 4984 4490 7 623 4414 129 72 39 chrUextra 5022338 5023232 -23981424 + MICROPIA_I LTR Gypsy 1650 2572 -1904 7 623 2647 7 0 3 chrUextra 5023333 5023642 -23981014 - DM297_I LTR Gypsy -864 5303 4996 7 623 5043 17 0 0 chrUextra 5023628 5024228 -23980428 - DM297_I LTR Gypsy -2272 3895 3296 7 623 2162 0 12 19 chrUextra 5024328 5024584 -23980072 + DM1731_I LTR Copia 3723 3976 0 7 623 2800 39 0 0 chrUextra 5024584 5024920 -23979736 + DM1731_LTR LTR Copia 1 336 0 7 623 40 37 0 0 chrUextra 5024983 5025037 -23979619 + AT_rich Low_complexity Low_complexity 1 54 0 7 623 1184 38 0 37 chrUextra 5025061 5025223 -23979433 + BATUMI_LTR LTR Pao 32 187 -85 7 623 1164 31 210 0 chrUextra 5025323 5025485 -23979171 + Gypsy12_I LTR Gypsy 4166 4361 -1185 7 623 6292 16 5 15 chrUextra 5025482 5026218 -23978438 + Gypsy12_I LTR Gypsy 4711 5439 -107 7 623 1964 221 44 58 chrUextra 5026342 5026909 -23977747 - Gypsy12_LTR LTR Gypsy -1777 559 1 7 623 2167 91 0 23 chrUextra 5026909 5027213 -23977443 - Gypsy12_I LTR Gypsy 0 5546 5250 7 623 21 0 0 0 chrUextra 5028175 5028196 -23976460 + AT_rich Low_complexity Low_complexity 1 21 0 7 623 1609 9 24 0 chrUextra 5028314 5028527 -23976129 - TLD2 Unknown Unknown 0 218 1 7 623 455 316 14 10 chrUextra 5028362 5028570 -23976086 - Gypsy4_I LTR Gypsy -3504 2784 2576 7 623 7492 11 3 3 chrUextra 5029303 5030198 -23974458 - DM176_I LTR Gypsy -481 5939 5045 7 623 674 276 90 51 chrUextra 5030363 5030718 -23973938 - TV1I LTR Gypsy -5118 942 574 7 623 3160 94 0 40 chrUextra 5030715 5031193 -23973463 - Gypsy12_I LTR Gypsy -4442 1104 646 7 623 1630 209 120 33 chrUextra 5031322 5031872 -23972784 - Gypsy12_LTR LTR Gypsy -575 1761 1164 7 623 469 251 21 84 chrUextra 5031890 5032129 -23972527 - Gypsy12_LTR LTR Gypsy -1258 1078 855 7 623 2415 0 0 0 chrUextra 5032288 5032552 -23972104 + Invader2_LTR LTR Gypsy 3 266 0 7 623 409 272 82 50 chrUextra 5032625 5032966 -23971690 + I_DM LINE I 3622 3973 -2258 7 623 34 24 0 0 chrUextra 5033435 5033476 -23971180 + AT_rich Low_complexity Low_complexity 1 41 0 7 623 1815 108 16 60 chrUextra 5033681 5033997 -23970659 - Gypsy6A_LTR LTR Gypsy -118 302 1 7 623 27 49 0 0 chrUextra 5034060 5034101 -23970555 + AT_rich Low_complexity Low_complexity 1 41 0 7 623 2261 179 17 8 chrUextra 5034278 5035173 -23969483 - SAR_DM Satellite Satellite -693 902 1 7 623 421 45 29 43 chrUextra 5035276 5035346 -23969310 - Gypsy12_I LTR Gypsy -5477 69 1 7 623 3465 177 44 43 chrUextra 5035346 5036168 -23968488 - Gypsy12_LTR LTR Gypsy 0 2336 1514 7 623 394 121 0 0 chrUextra 5036276 5036334 -23968322 + ARS406_DM Unknown Unknown 132 189 -164 7 623 3127 195 88 14 chrUextra 5036284 5037162 -23967494 - SAR_DM Satellite Satellite -255 1217 275 7 623 6446 68 20 7 chrUextra 5037262 5038156 -23966500 + IDEFIX_I LTR Gypsy 2659 3564 -2064 7 623 3910 177 19 22 chrUextra 5038260 5039149 -23965507 - SAR_DM Satellite Satellite -255 1217 332 7 623 537 244 122 22 chrUextra 5039252 5039432 -23965224 - TAHRE LINE telomeric -459 10004 9807 7 623 673 146 9 0 chrUextra 5039439 5039549 -23965107 - Gypsy12A_LTR LTR Gypsy -18 2262 2152 7 623 2267 108 183 0 chrUextra 5039546 5040115 -23964541 - Gypsy12_I LTR Gypsy -1044 4502 3830 7 623 4149 16 24 0 chrUextra 5040244 5040748 -23963908 - Invader2_I LTR Gypsy -3881 711 196 7 623 3185 38 0 2 chrUextra 5040740 5041138 -23963518 - TRANSIB2 DNA Transib -2178 666 270 7 623 2444 72 12 55 chrUextra 5041238 5042132 -23962524 + DMSAT6 Satellite Satellite 1 856 -69 7 623 454 113 0 0 chrUextra 5043229 5043300 -23961356 - ARS406_DM Unknown Unknown -282 71 1 7 623 3438 174 16 81 chrUextra 5043238 5044119 -23960537 + SAR_DM Satellite Satellite 224 1047 -425 7 623 2465 116 15 40 chrUextra 5044220 5045114 -23959542 - DMSAT6 Satellite Satellite -94 871 1 7 623 22 35 0 0 chrUextra 5045402 5045431 -23959225 + AT_rich Low_complexity Low_complexity 1 29 0 7 623 51 31 0 0 chrUextra 5045607 5045672 -23958984 + AT_rich Low_complexity Low_complexity 1 65 0 7 623 534 66 0 0 chrUextra 5046208 5046284 -23958372 + S_DM DNA Tc1 1661 1736 0 7 623 1058 23 15 8 chrUextra 5046284 5046412 -23958244 - CIRCE LINE Composite -1861 4495 4367 7 623 3744 14 2 0 chrUextra 5046412 5046834 -23957822 - Invader1_LTR LTR Gypsy 0 423 1 7 623 2172 11 8 0 chrUextra 5046834 5047102 -23957554 - Invader1_I LTR Gypsy 0 3186 2917 7 623 3931 177 17 11 chrUextra 5047204 5048084 -23956572 + SAR_DM Satellite Satellite 192 1076 -396 7 623 7925 2 11 0 chrUextra 5048196 5049090 -23955566 - DMRT1B LINE R1 -1838 3345 2442 7 623 533 70 0 0 chrUextra 5049190 5049261 -23955395 + ARS406_DM Unknown Unknown 119 189 -164 7 623 3633 194 20 19 chrUextra 5049198 5050082 -23954574 - SAR_DM Satellite Satellite -242 1230 346 7 623 976 50 22 6 chrUextra 5050184 5050325 -23954331 - FW_DM LINE Jockey -3336 1404 1228 7 623 3165 8 3 0 chrUextra 5050454 5050806 -23953850 - Gypsy2_LTR LTR Gypsy 0 353 1 7 623 1623 5 0 177 chrUextra 5050807 5051078 -23953578 - Gypsy2_I LTR Gypsy -9 6126 5904 7 623 22 35 0 0 chrUextra 5051331 5051360 -23953296 + AT_rich Low_complexity Low_complexity 1 29 0 7 623 224 185 31 0 chrUextra 5051647 5051712 -23952944 + (TAA)n Simple_repeat Simple_repeat 2 68 0 7 623 5144 93 18 4 chrUextra 5052176 5052942 -23951714 - S_DM DNA Tc1 -959 777 1 7 623 1022 24 0 8 chrUextra 5052942 5053066 -23951590 - CIRCE LINE Composite -1861 4495 4373 7 623 2868 57 60 0 chrUextra 5053166 5053551 -23951105 + PROTOP_A DNA P 698 1105 0 7 623 21 57 0 0 chrUextra 5054005 5054040 -23950616 + AT_rich Low_complexity Low_complexity 1 35 0 7 623 7381 31 25 0 chrUextra 5054160 5055054 -23949602 - R1_DM LINE R1 -1845 3511 2596 7 623 7217 44 11 1 chrUextra 5055154 5056048 -23948608 - R1_DM LINE R1 -3993 1363 461 7 623 262 150 0 0 chrUextra 5056158 5056198 -23948458 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 623 262 150 0 0 chrUextra 5056249 5056289 -23948367 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 623 246 150 0 0 chrUextra 5056341 5056381 -23948275 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 623 255 125 0 0 chrUextra 5056424 5056464 -23948192 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 7 623 1321 17 0 22 chrUextra 5056530 5056711 -23947945 + NTS_DM Other Other 25 201 -39 7 623 863 9 0 27 chrUextra 5056763 5056875 -23947781 + NTS_DM Other Other 25 133 -107 7 623 1252 18 0 6 chrUextra 5056875 5057040 -23947616 + NTS_DM Other Other 38 201 -39 7 623 972 38 0 0 chrUextra 5057142 5057273 -23947383 + QUASIMODO_I LTR Gypsy 2772 2902 -3158 7 623 5499 52 1 0 chrUextra 5057267 5058036 -23946620 + QUASIMODO_I LTR Gypsy 3168 3937 -2123 7 623 3801 26 0 0 chrUextra 5058136 5058590 -23946066 + MAX_I LTR Pao 6247 6700 -1214 7 623 704 266 12 46 chrUextra 5058616 5058936 -23945720 - Gypsy12_LTR LTR Gypsy -1564 772 502 7 623 274 232 0 0 chrUextra 5058948 5059004 -23945652 - Gypsy12_LTR LTR Gypsy -1816 464 409 7 623 661 107 0 136 chrUextra 5059173 5059335 -23945321 + HMSBEAGLE_I LTR Gypsy 6229 6368 -161 7 623 295 109 0 0 chrUextra 5059598 5059644 -23945012 + HMSBEAGLE_I LTR Gypsy 6360 6405 -124 7 623 950 139 0 12 chrUextra 5059840 5060007 -23944649 + DMLTR5 LTR Gypsy 102 266 0 7 623 1187 26 26 0 chrUextra 5060124 5060278 -23944378 - DM176_LTR LTR Gypsy -99 408 251 7 623 2198 11 0 78 chrUextra 5060279 5060586 -23944070 - DM176_LTR LTR Gypsy -224 283 1 7 623 1095 93 6 0 chrUextra 5060838 5060999 -23943657 + MAX_I LTR Pao 557 718 -7196 7 623 2149 202 43 26 chrUextra 5061296 5062007 -23942649 - SAR_DM Satellite Satellite -627 723 1 7 623 2552 16 0 6 chrUextra 5062111 5062434 -23942222 + G6_DM LINE Jockey 1722 2042 0 7 623 4651 11 0 0 chrUextra 5062452 5063004 -23941652 - S_DM DNA Tc1 -217 1519 968 7 623 2496 111 40 10 chrUextra 5063116 5063997 -23940659 - DMSAT6 Satellite Satellite 0 907 1 7 623 1620 0 0 0 chrUextra 5064300 5064577 -23940079 + (CAAGA)n Simple_repeat Simple_repeat 1 277 0 7 623 869 16 0 59 chrUextra 5064595 5064730 -23939926 + (CAAGA)n Simple_repeat Simple_repeat 5 131 0 7 623 3446 188 16 24 chrUextra 5065090 5065982 -23938674 - SAR_DM Satellite Satellite -316 1156 272 7 623 6960 26 41 0 chrUextra 5066083 5066976 -23937680 + NINJA_I LTR Pao 1159 2088 -3923 7 623 3224 37 10 0 chrUextra 5067076 5067481 -23937175 + DMRT1B LINE R1 4775 5183 0 7 623 505 30 105 0 chrUextra 5067499 5067632 -23937024 + (CAGAC)n Simple_repeat Simple_repeat 1 147 0 7 623 2623 31 3 0 chrUextra 5067644 5067969 -23936687 + DMRT1A LINE R1 1 326 -4857 7 623 1781 5 0 0 chrUextra 5068069 5068281 -23936375 - DMRT1B LINE R1 -721 4462 4251 7 623 4716 60 48 9 chrUextra 5068277 5068962 -23935694 + R1_DM LINE R1 176 887 -4469 7 623 3798 5 194 5 chrUextra 5069062 5069651 -23935005 + MDG1_I LTR Gypsy 5909 6799 -98 7 623 423 100 0 0 chrUextra 5069655 5069725 -23934931 + (TAA)n Simple_repeat Simple_repeat 3 72 0 7 623 1936 17 0 0 chrUextra 5069725 5069955 -23934701 + MDG1_LTR LTR Gypsy 87 316 -126 7 623 985 344 0 0 chrUextra 5070179 5070665 -23933991 - Invader6_I LTR Gypsy -1888 2211 1726 7 623 548 125 17 26 chrUextra 5071060 5071175 -23933481 + RSP Satellite Satellite 1 114 -4 7 623 1020 65 9 19 chrUextra 5071219 5071835 -23932821 + RSP Satellite Satellite 1 610 0 7 623 861 266 47 28 chrUextra 5072043 5072602 -23932054 + TART LINE telomeric 12798 13306 -1171 7 623 1645 119 7 4 chrUextra 5072664 5072933 -23931723 + TART LINE telomeric 6734 7003 -7474 7 623 3269 197 18 26 chrUextra 5073034 5073925 -23930731 - SAR_DM Satellite Satellite -220 1252 369 7 623 41 0 0 0 chrUextra 5074027 5074068 -23930588 + AT_rich Low_complexity Low_complexity 1 41 0 7 623 585 195 76 19 chrUextra 5074259 5074416 -23930240 - ACCORD2_LTR LTR Gypsy -5 210 45 7 623 2134 85 78 25 chrUextra 5074477 5074702 -23929954 - ACCORD2_I LTR Gypsy -8 7204 6979 7 623 185 0 40 0 chrUextra 5074702 5074727 -23929929 + (TTA)n Simple_repeat Simple_repeat 1 26 0 7 623 2134 85 78 25 chrUextra 5074727 5074862 -23929794 - ACCORD2_I LTR Gypsy -234 6978 6826 7 623 389 69 0 0 chrUextra 5074862 5074920 -23929736 - ACCORD2_I LTR Gypsy -341 6871 6814 7 623 7376 20 1 3 chrUextra 5075020 5075913 -23928743 - R2_DM LINE R2 -651 2956 2066 7 623 3796 9 0 2 chrUextra 5076013 5076472 -23928184 + MICROPIA_I LTR Gypsy 4019 4476 0 7 623 898 9 0 0 chrUextra 5076472 5076577 -23928079 + MICROPIA_LTR LTR Gypsy 1 105 -371 7 623 1376 12 0 23 chrUextra 5076573 5076744 -23927912 - ACCORD2_LTR LTR Gypsy -48 167 1 7 623 1378 34 34 0 chrUextra 5076744 5076906 -23927750 - R1_DM LINE R1 -2931 2425 2258 7 623 2310 35 10 10 chrUextra 5077010 5077323 -23927333 + BATUMI_I LTR Pao 6439 6751 -1212 7 623 4471 30 2 10 chrUextra 5077316 5077896 -23926760 - BATUMI_I LTR Pao -4489 3474 2900 7 623 3366 25 4 43 chrUextra 5078288 5078753 -23925903 + CIRCE LINE Composite 4981 5427 -929 7 623 336 0 0 0 chrUextra 5078852 5078892 -23925764 + CIRCE LINE Composite 5893 5932 -424 7 623 3286 183 67 22 chrUextra 5079053 5079885 -23924771 + STALKER4_I LTR Gypsy 885 1754 -4776 7 623 3760 189 5 8 chrUextra 5079985 5080870 -23923786 + SAR_DM Satellite Satellite 195 1076 -396 7 623 3517 117 0 0 chrUextra 5080978 5081497 -23923159 - Gypsy12_I LTR Gypsy -1446 4100 3582 7 623 3026 24 0 0 chrUextra 5081497 5081866 -23922790 - PROTOP_A DNA P 0 1105 737 7 623 3428 194 12 17 chrUextra 5081982 5082843 -23921813 - SAR_DM Satellite Satellite -291 1181 326 7 623 3109 200 11 16 chrUextra 5082964 5083857 -23920799 + SAR_DM Satellite Satellite 1 887 -216 7 623 2804 177 72 14 chrUextra 5083957 5084661 -23919995 - Gypsy12_LTR LTR Gypsy -136 2200 1456 7 623 398 202 145 16 chrUextra 5084664 5084850 -23919806 - Gypsy12_LTR LTR Gypsy -661 1675 1466 7 623 258 116 43 14 chrUextra 5085444 5085514 -23919142 + A-rich Low_complexity Low_complexity 1 72 0 7 623 1703 32 0 43 chrUextra 5085943 5086200 -23918456 + BATUMI_I LTR Pao 677 922 -7041 7 623 3367 41 2 13 chrUextra 5086200 5086648 -23918008 + BATUMI_I LTR Pao 1630 2072 -5891 7 623 1229 38 26 26 chrUextra 5086646 5086836 -23917820 + BATUMI_I LTR Pao 1914 2103 -5860 7 623 3254 186 13 17 chrUextra 5086936 5087824 -23916832 + SAR_DM Satellite Satellite 1 884 -208 7 623 2298 32 0 0 chrUextra 5087929 5088214 -23916442 - DM1731_LTR LTR Copia -45 291 7 7 623 7047 15 71 0 chrUextra 5088922 5089814 -23914842 - DOC2_DM LINE Jockey -2141 2652 1698 7 623 4007 194 12 7 chrUextra 5089956 5090807 -23913849 + ROVER-I_DM LTR Gypsy 3537 4391 -2193 7 623 1637 152 30 16 chrUextra 5090907 5091275 -23913381 - SAR_DM Satellite Satellite -557 915 543 7 623 2140 184 14 18 chrUextra 5091286 5091799 -23912857 - SAR_DM Satellite Satellite -396 1076 566 7 623 5402 2 0 2 chrUextra 5091899 5092520 -23912136 - R2_DM LINE R2 -2987 620 1 7 623 2186 0 4 0 chrUextra 5092538 5092791 -23911865 - LSU-rRNA_Dme rRNA rRNA -1319 2581 2328 7 623 586 132 0 0 chrUextra 5092891 5092997 -23911659 - ARS406_DM Unknown Unknown -247 106 1 7 623 3665 185 9 10 chrUextra 5092904 5093783 -23910873 + SAR_DM Satellite Satellite 195 1072 -400 7 623 4342 4 0 2 chrUextra 5093894 5094399 -23910257 - DOC LINE Jockey -4190 535 32 7 623 2460 32 109 20 chrUextra 5094427 5094775 -23909881 + ROO_I LTR Pao 4219 4597 -3659 7 623 1031 147 34 21 chrUextra 5094949 5095186 -23909470 + NTS_DM Other Other 1 240 0 7 623 977 147 38 21 chrUextra 5095325 5095561 -23909095 + NTS_DM Other Other 1 240 0 7 623 360 164 15 0 chrUextra 5095700 5095767 -23908889 + NTS_DM Other Other 1 68 -172 7 623 1749 131 47 44 chrUextra 5096398 5096759 -23907897 - ZAM_LTR LTR Gypsy 0 472 111 7 623 1396 319 52 33 chrUextra 5096863 5097749 -23906907 - Gypsy2_I LTR Gypsy -2127 4008 3106 7 623 3276 236 29 28 chrUextra 5097851 5099719 -23904937 + SAR_DM Satellite Satellite 1 1868 -208 7 623 486 117 0 0 chrUextra 5099658 5099735 -23904921 - ARS406_DM Unknown Unknown -166 187 111 7 623 7151 26 0 1 chrUextra 5099835 5100727 -23903929 + NINJA_I LTR Pao 1882 2772 -3239 7 623 6838 21 42 2 chrUextra 5100827 5101719 -23902937 - PROTOP_A DNA P -97 1008 82 7 623 2317 7 0 0 chrUextra 5101819 5102109 -23902547 + TRANSPAC_I LTR Gypsy 4301 4590 0 7 623 2879 3 0 0 chrUextra 5102108 5102438 -23902218 + TRANSPAC_LTR LTR Gypsy 1 330 0 7 623 2321 0 4 4 chrUextra 5102438 5102711 -23901945 - SSU-rRNA_Dme rRNA rRNA -555 1440 1168 7 623 1447 0 17 6 chrUextra 5103111 5103285 -23901371 + (TCTTG)n Simple_repeat Simple_repeat 3 178 0 7 623 21 57 0 0 chrUextra 5104260 5104295 -23900361 + AT_rich Low_complexity Low_complexity 1 35 0 7 623 444 326 136 14 chrUextra 5104328 5104695 -23899961 + BS LINE Jockey 116 527 -4599 7 623 3763 0 0 0 chrUextra 5104795 5105223 -23899433 + TABOR_LTR LTR Gypsy 79 506 0 7 623 1942 189 9 9 chrUextra 5105222 5105685 -23898971 + SAR_DM Satellite Satellite 457 919 -553 7 623 4389 32 13 1 chrUextra 5105787 5106679 -23897977 - DMRT1A LINE R1 -4094 1089 41 7 623 7658 0 10 0 chrUextra 5107771 5108663 -23895993 - DMRT1B LINE R1 -1596 3587 2687 7 623 631 91 0 10 chrUextra 5108763 5108863 -23895793 + SAR_DM Satellite Satellite 400 498 -974 7 623 3013 194 12 16 chrUextra 5108883 5109655 -23895001 + SAR_DM Satellite Satellite 1 768 -242 7 623 1620 0 0 0 chrUextra 5109755 5110026 -23894630 + (GAGAA)n Simple_repeat Simple_repeat 1 271 0 7 623 7078 29 1 2 chrUextra 5110747 5111639 -23893017 + NINJA_I LTR Pao 3849 4739 -1272 7 77 3974 16 0 2 chrUextra 5111739 5112192 -23892464 + HETA LINE telomeric 5630 6081 0 7 624 1786 149 13 36 chrUextra 5112187 5112631 -23892025 + HETA LINE telomeric 1 616 -5465 7 624 731 141 0 0 chrUextra 5112731 5112852 -23891804 - ARS406_DM Unknown Unknown -232 121 1 7 624 3755 195 8 17 chrUextra 5112756 5113600 -23891056 + SAR_DM Satellite Satellite 192 1028 -444 7 624 1318 225 198 56 chrUextra 5113723 5114548 -23890108 - Gypsy12_LTR LTR Gypsy -486 1794 853 7 624 7326 38 28 1 chrUextra 5114715 5115607 -23889049 - R1_DM LINE R1 -3628 1728 813 7 624 3693 176 19 25 chrUextra 5115707 5116599 -23888057 + SAR_DM Satellite Satellite 1 885 -216 7 624 1620 9 0 0 chrUextra 5117158 5117591 -23887065 + (TCTTG)n Simple_repeat Simple_repeat 1 433 0 7 624 5103 40 2 11 chrUextra 5117737 5118350 -23886306 - G5A_DM LINE Jockey -3 2838 2232 7 624 322 231 119 21 chrUextra 5118358 5118499 -23886157 + Gypsy7_I LTR Gypsy 1704 1805 -3179 7 624 232 259 67 11 chrUextra 5118493 5118583 -23886073 + Gypsy7_I LTR Gypsy 2155 2249 -3611 7 624 2087 176 21 24 chrUextra 5118692 5119575 -23885081 - SAR_DM Satellite Satellite -535 881 1 7 624 7583 7 48 0 chrUextra 5119675 5119807 -23884849 + STALKER4_I LTR Gypsy 1376 1507 -5023 7 624 189 0 0 0 chrUextra 5119807 5119828 -23884828 + (TATAA)n Simple_repeat Simple_repeat 2 22 0 7 624 7583 7 48 0 chrUextra 5119828 5120566 -23884090 + STALKER4_I LTR Gypsy 1508 2286 -4244 7 624 530 285 19 50 chrUextra 5120693 5120952 -23883704 + FROGGER_I LTR Copia 1827 2077 0 7 624 220 141 46 15 chrUextra 5121210 5121275 -23883381 + (TTA)n Simple_repeat Simple_repeat 2 68 0 7 624 3799 179 15 20 chrUextra 5121658 5122548 -23882108 - SAR_DM Satellite Satellite -498 885 1 7 624 3434 194 49 22 chrUextra 5122648 5123539 -23881117 + SAR_DM Satellite Satellite 72 986 -486 7 624 4472 43 1 1 chrUextra 5123639 5124530 -23880126 + R1_DM LINE R1 1061 1991 -3365 7 624 7664 22 10 1 chrUextra 5124630 5125521 -23879135 - R1_DM LINE R1 -2878 2478 1580 7 624 3395 103 68 6 chrUextra 5125628 5126143 -23878513 + TAHRE LINE telomeric 1140 1686 -8777 7 624 608 70 68 23 chrUextra 5126166 5126254 -23878402 + ACCORD2_LTR LTR Gypsy 124 215 0 7 624 1692 122 8 4 chrUextra 5126254 5126498 -23878158 + HETA LINE telomeric 2433 2677 -3404 7 624 5581 18 0 11 chrUextra 5126612 5127500 -23877156 - CIRCE LINE Composite -1868 4488 3564 7 624 6658 52 7 37 chrUextra 5127603 5128494 -23876162 + HETA LINE telomeric 3798 4661 -1420 7 624 347 322 25 23 chrUextra 5128656 5128878 -23875778 - BLASTOPIA_I LTR Gypsy -1061 3925 3541 7 624 318 289 18 43 chrUextra 5129163 5129326 -23875330 - BLASTOPIA_I LTR Gypsy -1565 3421 3263 7 624 2809 3 3 0 chrUextra 5129585 5129904 -23874752 + FW_DM LINE Jockey 4373 4692 0 7 624 2095 138 54 36 chrUextra 5129896 5130476 -23874180 - STALKER4_I LTR Gypsy -5525 1005 418 7 624 3999 186 8 22 chrUextra 5130582 5131460 -23873196 + SAR_DM Satellite Satellite 246 1111 -361 7 624 263 170 19 0 chrUextra 5131414 5131467 -23873189 - XDMR Unknown Unknown 0 361 308 7 624 7860 19 3 0 chrUextra 5131567 5132458 -23872198 - FW_DM LINE Jockey -662 4030 3137 7 624 1776 93 13 17 chrUextra 5132558 5132876 -23871780 - BATUMI_I LTR Pao -180 7783 7303 7 624 4282 48 7 9 chrUextra 5132899 5133449 -23871207 + BATUMI_I LTR Pao 6427 6975 -988 7 624 6535 55 89 5 chrUextra 5133549 5134440 -23870216 - TRANSIB2 DNA Transib -1543 1301 336 7 624 7640 16 26 0 chrUextra 5134540 5135431 -23869225 - ROO_I LTR Pao -3837 4419 3506 7 624 7114 24 75 22 chrUextra 5135531 5136422 -23868234 - Gypsy12_I LTR Gypsy -4346 1200 263 7 624 1040 193 20 29 chrUextra 5136522 5136767 -23867889 + Gypsy5_LTR LTR Gypsy 47 289 -141 7 624 5357 7 0 0 chrUextra 5137513 5138127 -23866529 - Copia_I LTR Copia -1823 2770 2157 7 624 2635 3 7 0 chrUextra 5138109 5138404 -23866252 - Copia_I LTR Copia -2930 1663 1367 7 624 1411 39 6 0 chrUextra 5138505 5138683 -23865973 - G5_DM LINE Jockey -76 4780 4602 7 624 3259 48 5 0 chrUextra 5138680 5139074 -23865582 - G5_DM LINE Jockey -489 4367 3972 7 624 21 0 0 0 chrUextra 5139105 5139126 -23865530 + AT_rich Low_complexity Low_complexity 1 21 0 7 624 4513 45 93 0 chrUextra 5139520 5140119 -23864537 - BS3_DM LINE Jockey -366 1424 770 7 624 720 197 13 72 chrUextra 5140149 5140384 -23864272 - Gypsy12A_LTR LTR Gypsy -1169 1111 891 7 624 2557 90 40 17 chrUextra 5141477 5142368 -23862288 + DMSAT6 Satellite Satellite 1 912 -6 7 624 1620 0 0 0 chrUextra 5142468 5142717 -23861939 + (GAGAA)n Simple_repeat Simple_repeat 1 249 0 7 624 4742 0 0 0 chrUextra 5142720 5143226 -23861430 + TABOR_LTR LTR Gypsy 1 506 0 7 624 1168 0 0 0 chrUextra 5143226 5143359 -23861297 + TABOR_I LTR Gypsy 1 133 -6203 7 624 8114 6 18 1 chrUextra 5143459 5144349 -23860307 - LSU-rRNA_Dme rRNA rRNA -413 3487 2583 7 624 2163 168 35 0 chrUextra 5144535 5144934 -23859722 + DM176_I LTR Gypsy 6008 6420 0 7 624 2096 37 34 4 chrUextra 5145070 5145339 -23859317 + R1_DM LINE R1 611 887 -4469 7 624 6473 24 7 84 chrUextra 5145439 5146320 -23858336 - TART LINE telomeric -99 14378 13581 7 624 4052 55 43 2 chrUextra 5146429 5146959 -23857697 - DMCR1A LINE CR1 -737 3733 3182 7 624 2962 49 25 0 chrUextra 5146952 5147319 -23857337 - DMCR1A LINE CR1 -1487 2983 2608 7 624 2094 30 0 22 chrUextra 5148036 5148307 -23856349 + DMCR1A LINE CR1 5 269 -4201 7 624 3414 38 21 27 chrUextra 5148409 5149246 -23855410 + HETRP_DM Satellite Satellite 1 832 -1456 7 624 6570 55 10 6 chrUextra 5149401 5150289 -23854367 - R1_DM LINE R1 -1140 4216 3456 7 624 788 118 0 14 chrUextra 5150392 5150538 -23854118 + (TTA)n Simple_repeat Simple_repeat 1 144 0 7 624 303 352 39 23 chrUextra 5150822 5151081 -23853575 + BS LINE Jockey 347 609 -4517 7 624 2554 129 26 3 chrUextra 5151379 5152268 -23852388 - DMSAT6 Satellite Satellite -38 909 1 7 624 1189 89 63 0 chrUextra 5152369 5152559 -23852097 - IDEFIX_I LTR Gypsy -4569 1059 858 7 624 21 0 0 0 chrUextra 5152949 5152970 -23851686 + AT_rich Low_complexity Low_complexity 1 21 0 7 624 576 230 63 58 chrUextra 5152979 5153207 -23851449 - TV1I LTR Gypsy -1939 4024 3814 7 624 4532 2 0 2 chrUextra 5153359 5153848 -23850808 - R2_DM LINE R2 -3118 489 2 7 624 3500 0 0 3 chrUextra 5153871 5154249 -23850407 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2256 7 624 3354 62 92 7 chrUextra 5154350 5155239 -23849417 + IDEFIX_I LTR Gypsy 2688 3652 -1976 7 624 2511 97 45 20 chrUextra 5155339 5156229 -23848427 - DMSAT6 Satellite Satellite -84 911 1 7 624 3511 39 2 2 chrUextra 5156329 5156746 -23847910 + LSU-rRNA_Dme rRNA rRNA 2144 2560 -1340 7 624 4293 6 0 2 chrUextra 5156752 5157219 -23847437 + R2_DM LINE R2 3 468 -3139 7 624 1005 128 0 0 chrUextra 5157319 5157475 -23847181 + ROVER-I_DM LTR Gypsy 5153 5308 -1276 7 624 754 218 0 11 chrUextra 5157510 5157686 -23846970 + ROVER-I_DM LTR Gypsy 5990 6163 -421 7 624 1675 115 41 13 chrUextra 5157881 5158199 -23846457 + ROVER-I_DM LTR Gypsy 6153 6479 -105 7 624 3725 192 17 22 chrUextra 5158309 5159179 -23845477 + SAR_DM Satellite Satellite 391 1256 -216 7 624 942 27 0 0 chrUextra 5159088 5159199 -23845457 - ARS406_DM Unknown Unknown -164 189 79 7 624 584 178 47 14 chrUextra 5159485 5159633 -23845023 - DNAREP1_DM LINE Penelope -441 153 1 7 624 7493 26 0 15 chrUextra 5160289 5161179 -23843477 + FW_DM LINE Jockey 1396 2272 -2420 7 624 3767 179 22 21 chrUextra 5161279 5162168 -23842488 + SAR_DM Satellite Satellite 1 889 -378 7 624 802 0 11 0 chrUextra 5163259 5163354 -23841302 + R1_DM LINE R1 4971 5066 -290 7 624 1004 35 0 0 chrUextra 5163351 5163465 -23841191 + R1_DM LINE R1 5243 5356 0 7 624 4715 66 3 7 chrUextra 5163498 5164111 -23840545 + R1_DM LINE R1 1 611 -4745 7 624 312 56 0 0 chrUextra 5164113 5164149 -23840507 + R1_DM LINE R1 1247 1282 -4074 7 624 8010 1 0 3 chrUextra 5164249 5165139 -23839517 + ACCORD_I LTR Gypsy 297 1183 -5105 7 624 4960 16 0 0 chrUextra 5165239 5165800 -23838856 - DMRT1B LINE R1 -1708 3475 2915 7 624 2936 15 0 0 chrUextra 5165794 5166129 -23838527 - DMRT1B LINE R1 -2373 2810 2476 7 624 489 170 19 9 chrUextra 5166230 5166337 -23838319 + HETA LINE telomeric 5803 5910 -171 7 624 27 49 0 0 chrUextra 5166347 5166388 -23838268 + AT_rich Low_complexity Low_complexity 1 41 0 7 624 5301 99 99 33 chrUextra 5167228 5168099 -23836557 - Gypsy12_I LTR Gypsy -4160 1386 459 7 624 7297 34 8 15 chrUextra 5168207 5169096 -23835560 - BATUMI_I LTR Pao -6071 1892 1010 7 624 1233 0 24 18 chrUextra 5169198 5169362 -23835294 - NTS_DM Other Other 0 240 76 7 624 2660 146 10 28 chrUextra 5169361 5170084 -23834572 - G6_DM LINE Jockey 0 2042 1739 7 624 1046 32 25 25 chrUextra 5170185 5170343 -23834313 + NTS_DM Other Other 83 240 0 7 624 1173 8 0 8 chrUextra 5170343 5170477 -23834179 + NTS_DM Other Other 1 133 -107 7 624 1294 25 0 6 chrUextra 5170477 5170639 -23834017 + NTS_DM Other Other 38 198 -42 7 624 909 18 0 27 chrUextra 5170704 5170816 -23833840 + NTS_DM Other Other 25 133 -107 7 624 1247 36 0 12 chrUextra 5170816 5170982 -23833674 + NTS_DM Other Other 38 201 -39 7 624 307 0 0 75 chrUextra 5171034 5171074 -23833582 + NTS_DM Other Other 25 61 -179 7 624 2023 0 0 0 chrUextra 5171174 5171390 -23833266 - HOBO DNA hAT -2800 216 1 7 624 809 51 67 25 chrUextra 5172163 5172283 -23832373 - ROVER-LTR_DM LTR Gypsy -242 125 1 7 624 2648 165 42 10 chrUextra 5172283 5172860 -23831796 - ROVER-I_DM LTR Gypsy 0 6584 5990 7 624 980 134 0 0 chrUextra 5172895 5173052 -23831604 - ROVER-I_DM LTR Gypsy -1276 5308 5152 7 624 3321 39 115 0 chrUextra 5173152 5173588 -23831068 - PROTOP DNA P -3994 486 1 7 624 3910 181 16 20 chrUextra 5174141 5175030 -23829626 - SAR_DM Satellite Satellite -321 1151 267 7 624 8025 8 8 0 chrUextra 5175130 5176019 -23828637 + STALKER4_I LTR Gypsy 4156 5051 -1479 7 624 21 0 0 0 chrUextra 5176857 5176878 -23827778 + AT_rich Low_complexity Low_complexity 1 21 0 7 624 629 51 13 0 chrUextra 5176930 5177008 -23827648 - NINJA_LTR LTR Pao -1 316 238 7 624 2565 104 16 18 chrUextra 5177108 5177996 -23826660 - DMSAT6 Satellite Satellite -95 886 1 7 624 3958 183 7 11 chrUextra 5178098 5178953 -23825703 - SAR_DM Satellite Satellite -430 1042 191 7 624 931 77 0 0 chrUextra 5178856 5178986 -23825670 + ARS406_DM Unknown Unknown 1 130 -223 7 624 2203 21 12 131 chrUextra 5179086 5179422 -23825234 + DM176_LTR LTR Gypsy 212 507 0 7 624 994 42 0 0 chrUextra 5179429 5179548 -23825108 - MDG1_I LTR Gypsy -5818 778 660 7 624 2808 86 29 10 chrUextra 5179542 5179953 -23824703 - MDG1_I LTR Gypsy -6177 419 1 7 624 980 291 57 22 chrUextra 5180075 5180531 -23824125 - G6_DM LINE Jockey -1305 737 266 7 624 254 81 0 51 chrUextra 5180687 5180726 -23823930 + NTS_DM Other Other 2 38 -202 7 624 1798 28 0 0 chrUextra 5180752 5180964 -23823692 - G2_DM LINE Jockey -32 3070 2859 7 624 763 88 276 17 chrUextra 5181123 5181343 -23823313 - Gypsy11_LTR LTR Gypsy 0 452 175 7 624 2490 106 209 2 chrUextra 5181432 5181953 -23822703 - HMSBEAGLE_I LTR Gypsy -4530 1999 1371 7 624 4475 38 80 0 chrUextra 5182066 5182942 -23821714 + Baggins1 LINE LOA 3381 4326 -1127 7 624 3974 9 4 4 chrUextra 5183042 5183499 -23821157 + PROTOP DNA P 4024 4480 0 7 624 2650 97 23 49 chrUextra 5183499 5183931 -23820725 + TART LINE telomeric 6926 7346 -7131 7 624 4064 172 12 24 chrUextra 5184032 5184915 -23819741 - SAR_DM Satellite Satellite -354 1118 246 7 624 266 133 0 0 chrUextra 5184875 5184920 -23819736 + ARS406_DM Unknown Unknown 1 45 -308 7 624 7799 8 28 1 chrUextra 5185020 5185909 -23818747 - Invader3_I LTR Gypsy -2571 2317 1405 7 624 485 84 0 0 chrUextra 5186998 5187069 -23817587 + DMTOM1_LTR LTR Gypsy 190 260 -150 7 624 254 242 61 0 chrUextra 5187098 5187197 -23817459 - TOM_I LTR Gypsy -184 5928 5824 7 624 2222 260 24 8 chrUextra 5187227 5187882 -23816774 - TOM_I LTR Gypsy -504 5608 4943 7 624 4532 30 0 0 chrUextra 5187987 5188516 -23816140 + FW_DM LINE Jockey 4161 4689 -3 7 624 3056 25 8 0 chrUextra 5188512 5188875 -23815781 - ROO_I LTR Pao -4051 4205 3840 7 624 8290 2 0 0 chrUextra 5188975 5189863 -23814793 - BS LINE Jockey -211 4915 4028 7 624 6284 85 56 5 chrUextra 5189963 5190851 -23813805 + HMSBEAGLE_I LTR Gypsy 2435 3368 -3161 7 624 354 24 0 0 chrUextra 5190951 5190992 -23813664 - R1_DM LINE R1 -5315 41 1 7 624 3880 22 71 0 chrUextra 5191025 5191839 -23812817 - R1_DM LINE R1 0 5356 4485 7 624 2792 131 11 21 chrUextra 5191939 5192414 -23812242 + TAHRE LINE telomeric 9986 10455 -8 7 624 2739 105 0 29 chrUextra 5192407 5192827 -23811829 + TART_B1 LINE telomeric 3707 4114 -6540 7 624 2613 114 18 8 chrUextra 5192930 5193815 -23810841 + DMSAT6 Satellite Satellite 1 894 -64 7 624 3791 184 15 21 chrUextra 5193925 5194792 -23809864 + SAR_DM Satellite Satellite 369 1230 -242 7 624 596 54 0 0 chrUextra 5194729 5194803 -23809853 - ARS406_DM Unknown Unknown -164 189 116 7 624 309 51 0 0 chrUextra 5195492 5195531 -23809125 + (TA)n Simple_repeat Simple_repeat 2 40 0 7 624 2529 98 3 41 chrUextra 5195893 5196777 -23807879 - DMSAT6 Satellite Satellite -82 850 1 7 624 3171 212 20 24 chrUextra 5196879 5197760 -23806896 + SAR_DM Satellite Satellite 376 1253 -219 7 624 26 30 0 0 chrUextra 5197902 5197935 -23806721 + AT_rich Low_complexity Low_complexity 1 33 0 7 624 44 20 0 0 chrUextra 5197947 5197998 -23806658 + AT_rich Low_complexity Low_complexity 1 51 0 7 624 429 45 0 15 chrUextra 5198013 5198081 -23806575 + HOBO DNA hAT 2422 2488 -528 7 624 860 162 12 6 chrUextra 5198083 5198244 -23806412 + HOBO DNA hAT 2855 3016 0 7 624 1427 95 266 21 chrUextra 5198856 5199145 -23805511 - Invader2_I LTR Gypsy -814 3778 3419 7 624 2498 35 9 6 chrUextra 5199145 5199460 -23805196 + IDEFIX_LTR LTR Gypsy 1 316 -278 7 624 21 0 0 0 chrUextra 5199460 5199481 -23805175 + AT_rich Low_complexity Low_complexity 1 21 0 7 624 2209 35 4 0 chrUextra 5199483 5199743 -23804913 - CIRCE LINE Composite -1027 5329 5069 7 624 262 250 12 23 chrUextra 5200133 5200219 -23804437 + (CATA)n Simple_repeat Simple_repeat 1 85 0 7 624 436 252 17 17 chrUextra 5200893 5201010 -23803646 - DM297_I LTR Gypsy -2673 3494 3378 7 624 3288 204 42 15 chrUextra 5200983 5201719 -23802937 - TOM_I LTR Gypsy -2954 3158 2403 7 624 2661 109 38 12 chrUextra 5201819 5202707 -23801949 - DMSAT6 Satellite Satellite -94 910 1 7 624 2601 104 34 24 chrUextra 5202807 5203695 -23800961 + DMSAT6 Satellite Satellite 1 897 -6 7 624 1673 123 0 0 chrUextra 5203795 5204030 -23800626 + HMSBEAGLE_I LTR Gypsy 4539 4773 -1756 7 624 1091 97 0 0 chrUextra 5204024 5204168 -23800488 + HMSBEAGLE_I LTR Gypsy 4881 5024 -1505 7 624 847 84 8 8 chrUextra 5204178 5204298 -23800358 + HMSBEAGLE_I LTR Gypsy 234 353 -6176 7 624 1687 164 0 0 chrUextra 5204421 5204683 -23799973 + HMSBEAGLE_I LTR Gypsy 1212 1473 -5056 7 624 2826 123 4 4 chrUextra 5204783 5205275 -23799381 + BATUMI_I LTR Pao 3993 4560 -3354 7 624 3229 60 2 0 chrUextra 5205273 5205671 -23798985 + BATUMI_I LTR Pao 4364 4762 -3201 7 624 7237 49 2 0 chrUextra 5205776 5206659 -23797997 - TART LINE telomeric -8442 6035 5151 7 624 325 138 0 17 chrUextra 5206759 5206818 -23797838 + MDG1_LTR LTR Gypsy 359 416 -26 7 624 2011 289 65 11 chrUextra 5206819 5207646 -23797010 + Gypsy4_I LTR Gypsy 1741 2612 -3676 7 624 1116 22 0 0 chrUextra 5208500 5208635 -23796021 + (GAGAA)n Simple_repeat Simple_repeat 5 139 0 7 624 389 296 19 19 chrUextra 5208954 5209116 -23795540 - MDG3_I LTR Gypsy -1562 3424 3263 7 624 314 329 7 7 chrUextra 5209425 5209566 -23795090 - Invader3_I LTR Gypsy -1859 3029 2889 7 624 1805 192 20 25 chrUextra 5209743 5210143 -23794513 - Gypsy12_LTR LTR Gypsy -1938 398 1 7 624 2724 77 143 6 chrUextra 5210142 5210611 -23794045 - Gypsy12_I LTR Gypsy 0 5546 5014 7 624 989 300 50 28 chrUextra 5210861 5211403 -23793253 - Copia_I LTR Copia -3689 904 351 7 624 477 17 0 0 chrUextra 5211699 5211759 -23792897 + DM1731_I LTR Copia 3917 3976 0 7 624 2876 36 0 0 chrUextra 5211759 5212095 -23792561 + DM1731_LTR LTR Copia 1 336 0 7 624 2297 55 10 3 chrUextra 5212095 5212391 -23792265 + IDEFIX_I LTR Gypsy 5331 5628 0 7 624 1623 31 0 0 chrUextra 5212391 5212587 -23792069 + IDEFIX_LTR LTR Gypsy 1 196 -398 7 624 3381 187 13 21 chrUextra 5212687 5213575 -23791081 - SAR_DM Satellite Satellite -837 881 1 7 624 7676 25 2 0 chrUextra 5213675 5214563 -23790093 - IDEFIX_I LTR Gypsy -3183 2445 1556 7 624 3109 17 0 3 chrUextra 5214663 5215011 -23789645 + QUASIMODO_LTR LTR Gypsy 311 657 -1 7 624 2194 193 30 35 chrUextra 5215011 5215551 -23789105 + TAHRE LINE telomeric 9281 9817 -646 7 624 4595 160 6 42 chrUextra 5215651 5216539 -23788117 - HETA LINE telomeric -48 6033 5178 7 624 4162 176 11 8 chrUextra 5216641 5217515 -23787141 - SAR_DM Satellite Satellite -416 1056 180 7 624 2817 86 32 10 chrUextra 5217626 5218509 -23786147 + DMSAT6 Satellite Satellite 1 902 -97 7 624 2624 108 15 18 chrUextra 5218637 5219500 -23785156 + DMSAT6 Satellite Satellite 1 860 0 7 624 4445 33 50 0 chrUextra 5219941 5220487 -23784169 + PROTOP DNA P 1 573 -3907 7 624 4563 42 39 142 chrUextra 5221583 5222324 -23782332 + CIRCE LINE Composite 5328 5992 -364 7 624 1004 76 0 0 chrUextra 5222321 5222453 -23782203 + CIRCE LINE Composite 6225 6356 0 7 624 3056 19 66 0 chrUextra 5222561 5223246 -23781410 + R1_DM LINE R1 4326 5055 -301 7 624 813 43 0 0 chrUextra 5223245 5223339 -23781317 + R1_DM LINE R1 5263 5356 0 7 624 534 55 68 0 chrUextra 5223372 5223445 -23781211 + R1_DM LINE R1 1 78 -5278 7 624 7646 16 17 8 chrUextra 5224535 5225422 -23779234 - SSU-rRNA_Dme rRNA rRNA -427 1568 674 7 624 7290 1 0 72 chrUextra 5225522 5226409 -23778247 - LSU-rRNA_Dme rRNA rRNA -1014 2886 2064 7 624 1380 104 9 23 chrUextra 5226510 5226726 -23777930 + Gypsy12A_LTR LTR Gypsy 2027 2239 -41 7 624 3383 38 31 2 chrUextra 5226739 5227159 -23777497 + PROTOP DNA P 81 512 -3968 7 624 28 71 0 0 chrUextra 5227298 5227354 -23777302 + AT_rich Low_complexity Low_complexity 1 56 0 7 624 4723 20 4 0 chrUextra 5227496 5228043 -23776613 + DOC2_DM LINE Jockey 913 1461 -3332 7 624 2849 39 0 20 chrUextra 5228039 5228383 -23776273 + G5A_DM LINE Jockey 2461 2797 -44 7 624 6858 34 1 5 chrUextra 5228483 5229294 -23775362 + FW_DM LINE Jockey 3885 4692 0 7 624 619 54 0 0 chrUextra 5229296 5229370 -23775286 - R1_DM LINE R1 -3966 1390 1317 7 624 6982 14 1 9 chrUextra 5229543 5230354 -23774302 + STALKER4_I LTR Gypsy 1064 1868 -4662 7 624 2697 200 105 19 chrUextra 5230457 5231200 -23773456 - Gypsy12_LTR LTR Gypsy -311 2025 1219 7 624 253 213 103 32 chrUextra 5231188 5231314 -23773342 - Gypsy12A_LTR LTR Gypsy -566 1714 1580 7 624 3210 14 0 6 chrUextra 5231444 5231803 -23772853 - R2_DM LINE R2 -3248 359 3 7 624 4794 13 2 0 chrUextra 5231801 5232331 -23772325 - LSU-rRNA_Dme rRNA rRNA -1319 2581 2051 7 624 4075 179 10 18 chrUextra 5232433 5233313 -23771343 - SAR_DM Satellite Satellite -354 1118 246 7 624 1618 6 0 0 chrUextra 5233872 5234046 -23770610 - SSU-rRNA_Dme rRNA rRNA 0 1995 1822 7 624 2317 23 0 0 chrUextra 5234046 5234304 -23770352 - Gypsy6_LTR LTR Gypsy 0 407 150 7 624 5913 22 19 1 chrUextra 5234404 5235083 -23769573 - DM1731_I LTR Copia -867 3109 2419 7 624 2121 9 0 0 chrUextra 5235050 5235283 -23769373 - DM1731_I LTR Copia -1786 2190 1958 7 624 7028 51 11 2 chrUextra 5235390 5236275 -23768381 - R1_DM LINE R1 -4207 1149 257 7 624 7804 12 1 1 chrUextra 5236376 5237262 -23767394 - R1_DM LINE R1 -1137 4219 3334 7 624 2356 17 55 0 chrUextra 5237362 5237651 -23767005 + Copia2_I LTR Copia 666 970 -3192 7 624 5152 11 3 2 chrUextra 5237674 5238248 -23766408 + Copia2_I LTR Copia 1879 2453 -1709 7 624 5751 8 0 0 chrUextra 5238348 5238997 -23765659 - G6_DM LINE Jockey -1393 649 1 7 624 310 202 24 37 chrUextra 5238996 5239078 -23765578 + HETRP_DM Satellite Satellite 1602 1682 -190 7 624 210 37 0 0 chrUextra 5239195 5239222 -23765434 + (GA)n Simple_repeat Simple_repeat 2 28 0 7 624 4798 53 106 55 chrUextra 5239334 5240220 -23764436 + R1_DM LINE R1 1017 1947 -3409 7 624 23 68 0 0 chrUextra 5240691 5240735 -23763921 + AT_rich Low_complexity Low_complexity 1 44 0 7 624 259 207 6 91 chrUextra 5240970 5241135 -23763521 + A-rich Low_complexity Low_complexity 1 151 0 7 624 600 14 0 0 chrUextra 5241306 5241379 -23763277 + NTS_DM Other Other 61 133 -107 7 624 1383 32 21 21 chrUextra 5241379 5241571 -23763085 + NTS_DM Other Other 38 229 -11 7 624 1167 8 0 0 chrUextra 5241603 5241731 -23762925 + NTS_DM Other Other 1 128 -112 7 624 3938 9 0 0 chrUextra 5241746 5242192 -23762464 - G6_DM LINE Jockey 0 2042 1597 7 624 43 0 0 0 chrUextra 5242368 5242411 -23762245 + AT_rich Low_complexity Low_complexity 1 43 0 7 625 539 340 17 10 chrUextra 5243664 5243955 -23760701 - Gypsy4_I LTR Gypsy -2815 3473 3181 7 625 288 196 0 0 chrUextra 5243940 5243996 -23760660 - DM297_I LTR Gypsy -3740 2427 2372 7 625 2570 111 22 11 chrUextra 5244268 5245150 -23759506 - DMSAT6 Satellite Satellite -149 890 1 7 625 4781 8 0 2 chrUextra 5245252 5245775 -23758881 - LSU-rRNA_Dme rRNA rRNA -545 3355 2834 7 625 438 20 0 0 chrUextra 5246085 5246136 -23758520 + (T)n Simple_repeat Simple_repeat 1 51 0 7 625 8014 9 1 2 chrUextra 5246236 5247122 -23757534 + SSU-rRNA_Dme rRNA rRNA 508 1392 -603 7 625 7666 34 1 0 chrUextra 5247222 5248108 -23756548 - MAX_I LTR Pao -5104 2810 1924 7 625 3059 6 0 0 chrUextra 5249194 5249526 -23755130 + GTWIN_I LTR Gypsy 5173 5504 -917 7 625 4196 53 11 3 chrUextra 5249516 5250080 -23754576 + GTWIN_I LTR Gypsy 5970 7044 -478 7 625 460 102 0 14 chrUextra 5250180 5250250 -23754406 - R1_DM LINE R1 -252 5104 5036 7 625 3218 36 65 4 chrUextra 5250242 5251066 -23753590 - R1_DM LINE R1 -665 4691 3746 7 625 2787 159 15 10 chrUextra 5251177 5252052 -23752604 + SAR_DM Satellite Satellite 1 879 -435 7 625 2918 6 0 9 chrUextra 5252153 5252497 -23752159 + DOC LINE Jockey 4380 4720 -5 7 625 4627 33 0 0 chrUextra 5252496 5253038 -23751618 + R1_DM LINE R1 2423 2964 -2392 7 625 2525 108 13 14 chrUextra 5253138 5254024 -23750632 + DMSAT6 Satellite Satellite 1 884 -18 7 625 7973 8 9 0 chrUextra 5254124 5255010 -23749646 + DMRT1B LINE R1 3437 4330 -853 7 625 3923 224 37 19 chrUextra 5255110 5256982 -23747674 + SAR_DM Satellite Satellite 1 1904 -220 7 625 4873 26 0 2 chrUextra 5257082 5257652 -23747004 + M4DM DNA Transib 248 816 -619 7 625 2595 27 0 0 chrUextra 5257662 5257962 -23746694 + M4DM DNA Transib 1136 1435 0 7 625 981 9 0 9 chrUextra 5258068 5258182 -23746474 - ROVER-I_DM LTR Gypsy -6369 215 103 7 625 1120 16 0 0 chrUextra 5258233 5258356 -23746300 - ROVER-I_DM LTR Gypsy -6461 123 1 7 625 2405 15 3 36 chrUextra 5258356 5258671 -23745985 - ROVER-LTR_DM LTR Gypsy 0 367 1 7 625 2495 11 0 0 chrUextra 5258671 5258954 -23745702 - ROVER-I_DM LTR Gypsy 0 6584 6302 7 625 7932 9 1 6 chrUextra 5259054 5259940 -23744716 + Gypsy4_I LTR Gypsy 1189 2070 -4218 7 625 4332 116 28 2 chrUextra 5260040 5260925 -23743731 + QUASIMODO_I LTR Gypsy 2078 3005 -2958 7 625 48 0 0 0 chrUextra 5261637 5261685 -23742971 + AT_rich Low_complexity Low_complexity 1 48 0 7 625 2251 34 4 0 chrUextra 5262374 5262641 -23742015 - DMCR1A LINE CR1 0 4470 4203 7 625 1589 75 4 62 chrUextra 5262641 5262897 -23741759 - BATUMI_LTR LTR Pao 0 272 32 7 625 3741 194 27 20 chrUextra 5263003 5263882 -23740774 - SAR_DM Satellite Satellite -242 1230 346 7 625 3066 137 26 4 chrUextra 5263984 5264582 -23740074 + BS3_DM LINE Jockey 1 416 -1374 7 625 1601 69 10 0 chrUextra 5264578 5264781 -23739875 + BS3_DM LINE Jockey 526 730 -1060 7 625 659 13 0 0 chrUextra 5264793 5264869 -23739787 + BS3_DM LINE Jockey 1458 1533 -257 7 625 818 29 0 19 chrUextra 5264974 5265078 -23739578 + BATUMI_I LTR Pao 7183 7284 -679 7 625 907 9 0 9 chrUextra 5265078 5265193 -23739463 + STALKER4_I LTR Gypsy 6417 6530 0 7 625 3158 14 0 0 chrUextra 5265193 5265542 -23739114 + STALKER4_LTR LTR Gypsy 1 349 -53 7 625 1334 205 0 20 chrUextra 5265560 5265854 -23738802 + STALKER4_I LTR Gypsy 228 515 -6015 7 625 23 0 0 0 chrUextra 5266157 5266180 -23738476 + AT_rich Low_complexity Low_complexity 1 23 0 7 625 2377 11 0 14 chrUextra 5266348 5266628 -23738028 + Copia_LTR LTR Copia 1 276 0 7 625 1873 5 0 5 chrUextra 5266628 5266839 -23737817 + Copia_I LTR Copia 1 210 -4383 7 625 337 307 16 16 chrUextra 5267568 5267697 -23736959 - DIVER2_I LTR Pao -1779 2368 2240 7 625 8228 2 0 0 chrUextra 5267925 5268809 -23735847 + Gypsy6_I LTR Gypsy 3837 4720 -2292 7 625 2594 185 111 95 chrUextra 5268909 5269794 -23734862 + Gypsy12A_LTR LTR Gypsy 1052 1950 -330 7 625 1250 309 5 4 chrUextra 5269894 5270317 -23734339 - Invader6_I LTR Gypsy -2186 1913 1501 7 625 870 280 22 67 chrUextra 5270358 5270764 -23733892 - Invader4_I LTR Gypsy -1505 908 521 7 625 4963 2 0 0 chrUextra 5270879 5271426 -23733230 + DOC LINE Jockey 4178 4724 -1 7 625 1676 143 65 28 chrUextra 5271424 5271748 -23732908 + MDG3_I LTR Gypsy 1580 1915 -3071 7 625 804 48 0 71 chrUextra 5271864 5271976 -23732680 - MAX_I LTR Pao -7810 104 1 7 625 1802 122 29 0 chrUextra 5271996 5272275 -23732381 - MAX_LTR LTR Pao -34 287 1 7 625 3548 54 0 7 chrUextra 5272284 5272749 -23731907 - MAX_I LTR Pao -2 7912 7451 7 625 2609 184 14 12 chrUextra 5272849 5273734 -23730922 - SAR_DM Satellite Satellite -432 885 1 7 625 716 191 13 26 chrUextra 5273836 5273992 -23730664 + HETRP_DM Satellite Satellite 1529 1682 -190 7 625 707 186 7 14 chrUextra 5274120 5274262 -23730394 + HETRP_DM Satellite Satellite 1529 1669 -203 7 625 683 220 71 48 chrUextra 5274344 5274554 -23730102 + HETRP_DM Satellite Satellite 1470 1684 -188 7 625 3808 2 0 0 chrUextra 5274819 5275227 -23729429 + BS2 LINE Jockey 4314 4721 0 7 625 198 0 0 0 chrUextra 5275233 5275255 -23729401 + (A)n Simple_repeat Simple_repeat 1 22 0 7 625 954 87 0 0 chrUextra 5275578 5275704 -23728952 - R1-2_DM LINE R1 -2125 1091 966 7 625 653 0 0 0 chrUextra 5275804 5275874 -23728782 + ROO_I LTR Pao 8187 8256 0 7 625 3999 2 0 0 chrUextra 5275874 5276302 -23728354 + ROO_LTR LTR Pao 1 428 0 7 625 3108 26 41 0 chrUextra 5276302 5276689 -23727967 - IDEFIX_I LTR Gypsy -592 5036 4634 7 625 3521 191 16 30 chrUextra 5276789 5277673 -23726983 - SAR_DM Satellite Satellite -315 1157 287 7 625 3359 193 42 18 chrUextra 5277774 5278659 -23725997 + SAR_DM Satellite Satellite 298 1203 -269 7 625 4224 4 2 2 chrUextra 5278759 5279238 -23725418 + DOC LINE Jockey 4244 4722 -3 7 625 240 111 0 62 chrUextra 5279744 5279792 -23724864 + XDMR Unknown Unknown 317 361 0 7 625 3905 170 15 33 chrUextra 5279751 5280629 -23724027 - SAR_DM Satellite Satellite -369 1103 242 7 625 3750 192 21 11 chrUextra 5280735 5281609 -23723047 + SAR_DM Satellite Satellite 195 1076 -396 7 625 5617 20 138 1 chrUextra 5281714 5282474 -23722182 - DOC2_DM LINE Jockey -2367 2426 1563 7 625 685 68 0 0 chrUextra 5282508 5282596 -23722060 - DMCR1A LINE CR1 0 4470 4383 7 625 6965 29 10 37 chrUextra 5282699 5283584 -23721072 + G_DM LINE Jockey 3033 3893 -453 7 625 5791 26 34 0 chrUextra 5283684 5284569 -23720087 - R1_DM LINE R1 -2231 3125 2211 7 625 731 97 16 64 chrUextra 5285366 5285554 -23719102 + GA-rich Low_complexity Low_complexity 1 179 0 7 625 8052 7 1 1 chrUextra 5285654 5286539 -23718117 - R1_DM LINE R1 -683 4673 3789 7 625 7935 11 0 0 chrUextra 5286639 5287523 -23717133 + ROO_I LTR Pao 1624 2507 -5749 7 625 2800 76 14 32 chrUextra 5287623 5288507 -23716149 - DMSAT6 Satellite Satellite -46 867 1 7 625 4211 28 69 5 chrUextra 5288608 5289491 -23715165 - DMRT1B LINE R1 -2947 2236 1297 7 625 1097 63 221 0 chrUextra 5289591 5289749 -23714907 + Gypsy12_I LTR Gypsy 5354 5546 0 7 625 933 136 141 37 chrUextra 5289748 5289939 -23714717 + Gypsy12_LTR LTR Gypsy 1 211 -2125 7 625 1156 258 5 97 chrUextra 5289942 5290385 -23714271 + Gypsy12_LTR LTR Gypsy 402 803 -1533 7 625 3640 195 14 28 chrUextra 5290575 5291459 -23713197 - SAR_DM Satellite Satellite -470 872 1 7 625 4930 32 79 3 chrUextra 5291559 5292443 -23712213 - R1_DM LINE R1 -145 5211 4261 7 625 1409 105 62 8 chrUextra 5292836 5293095 -23711561 + DMSAT6 Satellite Satellite 133 405 -65 7 625 3865 198 13 20 chrUextra 5293527 5294411 -23710245 + SAR_DM Satellite Satellite 1 877 -217 7 625 7882 18 0 1 chrUextra 5294511 5295395 -23709261 + HETA LINE telomeric 1872 2754 -3327 7 625 2901 24 71 9 chrUextra 5295495 5296127 -23708529 + R1_DM LINE R1 4385 5055 -301 7 625 798 32 0 11 chrUextra 5296126 5296221 -23708435 + R1_DM LINE R1 5263 5356 0 7 625 926 64 24 0 chrUextra 5296254 5296379 -23708277 + R1_DM LINE R1 1 128 -5228 7 625 2918 167 41 14 chrUextra 5296482 5297065 -23707591 + Gypsy12_LTR LTR Gypsy 1667 2265 -71 7 625 1216 107 297 44 chrUextra 5297070 5297363 -23707293 + Gypsy12_I LTR Gypsy 366 732 -4814 7 625 840 137 0 7 chrUextra 5297463 5297603 -23707053 + ARS406_DM Unknown Unknown 51 189 -164 7 625 3100 198 82 14 chrUextra 5297500 5298340 -23706316 - SAR_DM Satellite Satellite -203 1269 373 7 625 7028 13 5 11 chrUextra 5298447 5298863 -23705793 - DM176_I LTR Gypsy -5476 944 529 7 625 181 30 29 57 chrUextra 5298863 5298898 -23705758 + (TTA)n Simple_repeat Simple_repeat 3 36 0 7 625 7028 13 5 11 chrUextra 5298898 5299329 -23705327 - DM176_I LTR Gypsy -5892 528 103 7 625 2192 53 94 0 chrUextra 5299431 5299751 -23704905 + PROTOP_B DNA P 634 983 -170 7 625 2222 57 11 0 chrUextra 5299903 5300185 -23704471 - ZAM_I LTR Gypsy -107 7383 7099 7 625 835 75 44 7 chrUextra 5300180 5300315 -23704341 - ZAM_I LTR Gypsy -714 6776 6637 7 625 2594 119 7 23 chrUextra 5300415 5301296 -23703360 - DMSAT6 Satellite Satellite -105 866 1 7 625 3579 200 13 27 chrUextra 5301399 5302283 -23702373 + SAR_DM Satellite Satellite 1 871 -242 7 625 7582 19 30 0 chrUextra 5302383 5303262 -23701394 + DOC2_DM LINE Jockey 2168 3072 -1721 7 625 7665 20 2 0 chrUextra 5303367 5304251 -23700405 - TAHRE LINE telomeric -5717 4746 3861 7 625 2567 128 27 21 chrUextra 5304355 5305235 -23699421 + DMSAT6 Satellite Satellite 1 885 -69 7 625 4090 69 55 24 chrUextra 5305335 5306002 -23698654 - STALKER4_I LTR Gypsy -4959 1571 884 7 625 1935 18 5 0 chrUextra 5306002 5306219 -23698437 - Invader1_LTR LTR Gypsy 0 423 206 7 625 4021 172 16 27 chrUextra 5306319 5307203 -23697453 - SAR_DM Satellite Satellite -265 1207 334 7 625 5374 2 0 0 chrUextra 5307303 5307875 -23696781 - HOBO DNA hAT -2444 572 1 7 625 1568 56 9 32 chrUextra 5308287 5308507 -23696149 + BATUMI_LTR LTR Pao 58 272 0 7 625 4798 43 36 14 chrUextra 5308507 5309168 -23695488 + BATUMI_I LTR Pao 1 676 -7287 7 625 7687 3 12 0 chrUextra 5309271 5310155 -23694501 + QUASIMODO_I LTR Gypsy 990 1884 -4176 7 625 326 101 26 115 chrUextra 5310256 5310334 -23694322 - TIRANT_I LTR Gypsy -7621 71 1 7 625 1356 48 0 0 chrUextra 5310766 5310932 -23693724 - Gypsy10_LTR LTR Gypsy -198 166 1 7 625 21 0 0 0 chrUextra 5310963 5310984 -23693672 + AT_rich Low_complexity Low_complexity 1 21 0 7 625 7872 10 10 6 chrUextra 5311239 5312123 -23692533 - FW_DM LINE Jockey -1956 2736 1849 7 625 7167 17 2 9 chrUextra 5312223 5313107 -23691549 + DM412 LTR Gypsy 1146 2023 -4874 7 625 7818 11 0 1 chrUextra 5313207 5314065 -23690591 + DMRT1B LINE R1 4327 5183 0 7 625 7793 3 7 0 chrUextra 5314191 5315075 -23689581 - DM176_I LTR Gypsy -3889 2531 1642 7 625 6619 30 14 53 chrUextra 5315175 5316059 -23688597 - NINJA_I LTR Pao -5009 1002 154 7 625 2545 264 27 24 chrUextra 5316161 5317043 -23687613 - DM297_I LTR Gypsy -1872 4295 3411 7 625 7546 33 0 0 chrUextra 5317143 5318027 -23686629 + G2_DM LINE Jockey 2107 2990 -112 7 625 2844 84 25 10 chrUextra 5319111 5319995 -23684661 + DMSAT6 Satellite Satellite 1 896 -74 7 625 3346 96 34 36 chrUextra 5320095 5320624 -23684032 - Gypsy12_I LTR Gypsy -5018 528 1 7 625 2191 120 20 14 chrUextra 5320624 5320978 -23683678 - Gypsy12A_LTR LTR Gypsy 0 2280 1925 7 625 383 296 18 25 chrUextra 5321158 5321321 -23683335 + MDG3_I LTR Gypsy 3263 3424 -1562 7 625 334 306 24 53 chrUextra 5321658 5321865 -23682791 + BLASTOPIA_I LTR Gypsy 3541 3741 -740 7 625 780 189 289 60 chrUextra 5322067 5322478 -23682178 - TAHRE LINE telomeric -3986 10491 9807 7 625 2971 115 4 46 chrUextra 5322473 5322947 -23681709 - Gypsy12_LTR LTR Gypsy -23 2313 1860 7 625 7632 34 1 0 chrUextra 5324031 5324915 -23679741 + BATUMI_I LTR Pao 4536 5420 -2543 7 625 1018 53 0 0 chrUextra 5325015 5325147 -23679509 + ARS406_DM Unknown Unknown 58 189 -164 7 625 3639 191 14 22 chrUextra 5325044 5325896 -23678760 - SAR_DM Satellite Satellite -203 1269 425 7 625 1546 294 54 36 chrUextra 5325998 5326851 -23677805 - DOC LINE Jockey -1053 3672 2805 7 625 6666 17 0 59 chrUextra 5326981 5327864 -23676792 - DM176_I LTR Gypsy -5419 1001 171 7 625 4507 86 66 29 chrUextra 5328127 5328846 -23675810 + TART LINE telomeric 9650 10365 -4112 7 625 4065 0 0 0 chrUextra 5328947 5329391 -23675265 + FW_DM LINE Jockey 4249 4692 0 7 625 980 285 8 13 chrUextra 5329392 5329780 -23674876 - MDG3_I LTR Gypsy -962 4024 3481 7 625 21 89 0 0 chrUextra 5331689 5331745 -23672911 + AT_rich Low_complexity Low_complexity 1 56 0 7 625 2652 57 6 6 chrUextra 5331896 5332233 -23672423 - R1_DM LINE R1 -5019 337 1 7 625 4318 25 39 2 chrUextra 5332266 5332779 -23671877 - R1_DM LINE R1 0 5356 4825 7 625 5810 85 3 9 chrUextra 5332879 5333762 -23670894 + BATUMI_I LTR Pao 4281 5236 -2678 7 625 7070 27 75 0 chrUextra 5333862 5334745 -23669911 + R1_DM LINE R1 1564 2512 -2844 7 625 272 175 117 58 chrUextra 5335002 5335105 -23669551 - Gypsy2_LTR LTR Gypsy -150 203 95 7 625 2169 274 7 48 chrUextra 5335119 5335722 -23668934 - Gypsy2_I LTR Gypsy -91 6044 5467 7 625 4654 194 5 0 chrUextra 5335828 5336711 -23667945 + ROVER-I_DM LTR Gypsy 3505 4391 -2193 7 625 2896 3 0 0 chrUextra 5336811 5337143 -23667513 - ROO_I LTR Pao -6875 1381 1050 7 625 4635 7 2 0 chrUextra 5337115 5337673 -23666983 + ROO_I LTR Pao 7698 8256 0 7 625 3465 199 14 22 chrUextra 5337798 5338677 -23665979 - SAR_DM Satellite Satellite -216 1256 385 7 625 5374 5 2 22 chrUextra 5338777 5339419 -23665237 + BATUMI_I LTR Pao 6674 7302 -661 7 625 2031 4 0 4 chrUextra 5339432 5339660 -23664996 - BATUMI_I LTR Pao -1543 6420 6194 7 625 2605 94 2 34 chrUextra 5339760 5340639 -23664017 - DMSAT6 Satellite Satellite -67 851 1 7 625 7294 20 6 0 chrUextra 5340743 5341626 -23663030 + IDEFIX_I LTR Gypsy 4172 5059 -569 7 625 843 70 101 0 chrUextra 5341726 5341855 -23662801 - G2_DM LINE Jockey -434 2668 2527 7 625 1037 36 0 0 chrUextra 5341851 5341988 -23662668 + G2_DM LINE Jockey 2934 3070 -32 7 625 4360 47 24 0 chrUextra 5341988 5342542 -23662114 - G2_DM LINE Jockey -9 3093 2527 7 625 539 28 0 0 chrUextra 5342538 5342609 -23662047 + G2_DM LINE Jockey 2934 3004 -98 7 625 692 191 0 7 chrUextra 5342709 5342846 -23661810 + DMLTR5 LTR Gypsy 131 266 0 7 625 372 95 270 14 chrUextra 5342845 5342977 -23661679 + HMSBEAGLE_I LTR Gypsy 1 221 -6308 7 625 259 128 0 21 chrUextra 5343207 5343255 -23661401 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 7 625 259 128 0 21 chrUextra 5343500 5343548 -23661108 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 7 625 6371 28 8 3 chrUextra 5343819 5344575 -23660081 + DMRT1A LINE R1 1 760 -4423 7 625 1762 5 84 0 chrUextra 5344675 5344888 -23659768 - STALKER4_LTR LTR Gypsy -108 294 64 7 625 954 66 96 0 chrUextra 5344885 5345021 -23659635 - FW2_DM LINE Jockey -3429 532 384 7 625 1123 82 3 3 chrUextra 5345023 5345191 -23659465 - FW2_DM LINE Jockey -3805 156 1 7 625 3957 169 13 19 chrUextra 5345669 5346527 -23658129 + SAR_DM Satellite Satellite 224 1076 -396 7 625 3796 186 11 18 chrUextra 5346643 5347517 -23657139 - SAR_DM Satellite Satellite -359 1113 246 7 625 270 128 0 0 chrUextra 5347477 5347524 -23657132 + ARS406_DM Unknown Unknown 1 47 -306 7 625 3791 215 15 8 chrUextra 5347624 5348490 -23656166 + TABOR_I LTR Gypsy 4173 5044 -1292 7 625 7522 5 9 0 chrUextra 5348607 5349490 -23655166 + DM176_I LTR Gypsy 1429 2319 -4101 7 625 1620 12 1 0 chrUextra 5349590 5350271 -23654385 + (TTCTC)n Simple_repeat Simple_repeat 1 681 0 7 625 1142 73 0 6 chrUextra 5350282 5350462 -23654194 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 7 625 1470 35 0 0 chrUextra 5350573 5350743 -23653913 + PROTOP DNA P 4311 4480 0 7 625 21 89 0 0 chrUextra 5351271 5351327 -23653329 + AT_rich Low_complexity Low_complexity 1 56 0 7 625 37 39 0 0 chrUextra 5351835 5351886 -23652770 + AT_rich Low_complexity Low_complexity 1 51 0 7 625 22 35 0 0 chrUextra 5351987 5352016 -23652640 + AT_rich Low_complexity Low_complexity 1 29 0 7 625 254 192 41 0 chrUextra 5352213 5352286 -23652370 + (TTATA)n Simple_repeat Simple_repeat 5 80 0 7 625 7274 30 1 10 chrUextra 5352539 5353422 -23651234 + FW_DM LINE Jockey 1139 2013 -2679 7 625 6954 32 1 12 chrUextra 5353522 5354405 -23650251 + STALKER4_I LTR Gypsy 2701 3573 -2957 7 625 7906 14 1 0 chrUextra 5354505 5355388 -23649268 - BS LINE Jockey -1412 3714 2831 7 625 3157 170 10 6 chrUextra 5355488 5356369 -23648287 - SAR_DM Satellite Satellite -601 884 1 7 625 3450 36 63 0 chrUextra 5356471 5357013 -23647643 + ROO_I LTR Pao 4482 5057 -3199 7 625 2958 21 0 0 chrUextra 5357013 5357353 -23647303 - PROTOP DNA P 0 4480 4141 7 625 3624 183 19 27 chrUextra 5357453 5358314 -23646342 + SAR_DM Satellite Satellite 377 1230 -242 7 625 676 24 12 0 chrUextra 5358251 5358335 -23646321 - ARS406_DM Unknown Unknown -164 189 105 7 625 7560 1 2 0 chrUextra 5358435 5359317 -23645339 - ACCORD_I LTR Gypsy -402 5886 5003 7 625 2959 54 24 0 chrUextra 5359417 5359790 -23644866 + TART_B1 LINE telomeric 3056 3437 -7217 7 625 4374 18 0 0 chrUextra 5359790 5360299 -23644357 - PROTOP_A DNA P 0 1105 597 7 625 5244 17 0 5 chrUextra 5360399 5361005 -23643651 - QUASIMODO_I LTR Gypsy -5457 603 1 7 625 2337 15 0 7 chrUextra 5361005 5361281 -23643375 - QUASIMODO_LTR LTR Gypsy 0 658 385 7 625 2771 195 50 58 chrUextra 5361382 5362262 -23642394 + TART LINE telomeric 8064 8936 -5541 7 625 1173 49 0 0 chrUextra 5362428 5362571 -23642085 - CIRCE LINE Composite -1376 4980 4838 7 625 976 52 7 0 chrUextra 5362567 5362695 -23641961 - CIRCE LINE Composite -1735 4621 4493 7 625 3799 90 2 2 chrUextra 5362695 5363239 -23641417 - S_DM DNA Tc1 0 1736 1193 7 625 6872 37 7 24 chrUextra 5363345 5364227 -23640429 + BATUMI_I LTR Pao 1041 1907 -6056 7 625 1995 38 0 0 chrUextra 5364327 5364564 -23640092 + DIVER_I LTR Pao 5407 5643 0 7 625 1249 112 0 108 chrUextra 5364564 5364815 -23639841 + DIVER_LTR LTR Pao 1 224 0 7 625 1654 121 94 40 chrUextra 5364836 5365208 -23639448 + HETA LINE telomeric 4958 5349 -732 7 625 2981 14 0 8 chrUextra 5365309 5365679 -23638977 + TART LINE telomeric 14104 14470 -7 7 625 3568 106 0 2 chrUextra 5365678 5366191 -23638465 + TART_B1 LINE telomeric 924 1435 -9219 7 625 3853 191 7 16 chrUextra 5366294 5367168 -23637488 - SAR_DM Satellite Satellite -361 1111 246 7 625 259 133 0 0 chrUextra 5367128 5367173 -23637483 + ARS406_DM Unknown Unknown 1 45 -308 7 625 6567 32 8 5 chrUextra 5367274 5368125 -23636531 + PROTOP DNA P 177 1030 -3450 7 625 5579 10 6 13 chrUextra 5368255 5368967 -23635689 + STALKER4_I LTR Gypsy 5824 6530 0 7 625 1446 12 0 0 chrUextra 5368967 5369136 -23635520 + STALKER4_LTR LTR Gypsy 1 169 -233 7 625 3771 239 38 26 chrUextra 5369239 5370589 -23634067 + SAR_DM Satellite Satellite 1 1365 -203 7 625 1092 164 24 19 chrUextra 5370637 5371048 -23633608 + SAR_DM Satellite Satellite 1 412 -680 7 625 403 194 0 19 chrUextra 5371206 5371311 -23633345 + XDMR_DM Unknown Unknown 258 360 0 7 625 3772 173 36 19 chrUextra 5371225 5372083 -23632573 - SAR_DM Satellite Satellite -354 1118 246 7 625 7751 14 8 0 chrUextra 5372183 5373065 -23631591 + Gypsy4_I LTR Gypsy 933 1821 -4467 7 78 4562 39 7 41 chrUextra 5373165 5374047 -23630609 + CIRCE LINE Composite 5137 5934 -422 7 626 246 132 0 0 chrUextra 5374535 5374573 -23630083 - PROTOP_B DNA P 0 1153 1116 7 626 475 184 354 0 chrUextra 5374573 5374731 -23629925 - PROTOP_B DNA P 0 1153 940 7 626 37 52 0 0 chrUextra 5374780 5374838 -23629818 + AT_rich Low_complexity Low_complexity 1 58 0 7 626 7467 33 6 1 chrUextra 5375129 5376011 -23628645 + Gypsy3_I LTR Gypsy 534 1419 -4758 7 626 838 53 21 26 chrUextra 5376111 5376243 -23628413 - BATUMI_LTR LTR Pao -134 138 32 7 626 27 87 0 0 chrUextra 5376289 5376358 -23628298 + AT_rich Low_complexity Low_complexity 1 69 0 7 626 42 20 0 0 chrUextra 5376885 5376934 -23627722 + AT_rich Low_complexity Low_complexity 1 49 0 7 626 817 278 52 27 chrUextra 5377103 5377535 -23627121 + TART LINE telomeric 13085 13306 -1171 7 626 2462 98 152 2 chrUextra 5377575 5377975 -23626681 + TART LINE telomeric 6734 7193 -7284 7 626 2911 107 71 30 chrUextra 5378075 5378665 -23625991 - TART LINE telomeric -4568 9909 9296 7 626 1330 207 24 10 chrUextra 5378653 5378946 -23625710 - TAHRE LINE telomeric -350 10113 9817 7 626 639 200 7 15 chrUextra 5379121 5379258 -23625398 - HETRP_DM Satellite Satellite -208 1664 1529 7 626 687 192 12 49 chrUextra 5379386 5379550 -23625106 - HETRP_DM Satellite Satellite -197 1675 1518 7 626 697 217 6 31 chrUextra 5379662 5379824 -23624832 - HETRP_DM Satellite Satellite -197 1675 1518 7 626 4174 13 0 0 chrUextra 5380039 5380510 -23624146 + R1_DM LINE R1 4884 5354 -2 7 626 2815 65 5 5 chrUextra 5380545 5380919 -23623737 + R1_DM LINE R1 1 374 -4982 7 626 6636 56 24 10 chrUextra 5381021 5381899 -23622757 + Gypsy7_I LTR Gypsy 2754 3643 -1341 7 626 1955 46 0 0 chrUextra 5382003 5382241 -23622415 - MDG3_I LTR Gypsy -4748 238 1 7 626 470 103 13 0 chrUextra 5382240 5382318 -23622338 - MDG3_LTR LTR Gypsy 0 267 189 7 626 1668 139 189 2 chrUextra 5382351 5382884 -23621772 - DMRT1B LINE R1 -360 4823 4191 7 626 1659 183 6 8 chrUextra 5382987 5383345 -23621311 - SAR_DM Satellite Satellite -620 852 496 7 626 2590 158 8 10 chrUextra 5383360 5383865 -23620791 - SAR_DM Satellite Satellite -569 903 400 7 626 7505 6 9 0 chrUextra 5383965 5384846 -23619810 - DM176_I LTR Gypsy -3800 2620 1732 7 626 1251 57 0 0 chrUextra 5384946 5385162 -23619494 + (TTA)n Simple_repeat Simple_repeat 1 216 0 7 626 1112 93 0 7 chrUextra 5385177 5385459 -23619197 + (TTA)n Simple_repeat Simple_repeat 1 279 0 7 626 229 339 31 31 chrUextra 5385936 5386064 -23618592 - Gypsy2_I LTR Gypsy -4664 1471 1344 7 626 6970 46 2 12 chrUextra 5388870 5389751 -23614905 + BATUMI_I LTR Pao 2780 3651 -4312 7 626 7152 33 55 0 chrUextra 5389851 5390732 -23613924 - Baggins1 LINE LOA -4090 1363 435 7 626 594 159 259 6 chrUextra 5390833 5390991 -23613665 + DNAREP1_DM LINE Penelope 125 322 -272 7 626 439 147 82 21 chrUextra 5390963 5391060 -23613596 + DNAREP1_DM LINE Penelope 167 269 -325 7 626 3093 167 46 74 chrUextra 5391067 5391713 -23612943 + Gypsy2_I LTR Gypsy 3878 4505 -1630 7 626 2379 108 7 68 chrUextra 5391813 5392692 -23611964 + DMSAT6 Satellite Satellite 1 825 -108 7 626 1158 22 0 0 chrUextra 5392794 5392931 -23611725 - IDEFIX_LTR LTR Gypsy -457 137 1 7 626 5974 34 1 3 chrUextra 5392931 5393675 -23610981 - IDEFIX_I LTR Gypsy 0 5628 4886 7 626 2533 82 26 50 chrUextra 5394756 5395634 -23609022 - DMSAT6 Satellite Satellite -144 856 1 7 626 298 143 43 34 chrUextra 5395739 5395831 -23608825 + TART LINE telomeric 8091 8156 -6321 7 626 3442 54 98 2 chrUextra 5395949 5396416 -23608240 + PROTOP DNA P 1 512 -3968 7 626 28 71 0 0 chrUextra 5396555 5396611 -23608045 + AT_rich Low_complexity Low_complexity 1 56 0 7 626 6704 48 6 2 chrUextra 5396718 5397568 -23607088 - DOC2_DM LINE Jockey -3632 1161 309 7 626 180 0 0 0 chrUextra 5397579 5397599 -23607057 + (T)n Simple_repeat Simple_repeat 1 20 0 7 626 3942 182 18 11 chrUextra 5397721 5398580 -23606076 - SAR_DM Satellite Satellite -396 1076 212 7 626 792 11 0 0 chrUextra 5398680 5398770 -23605886 + ROO_I LTR Pao 8167 8256 0 7 626 3145 22 54 0 chrUextra 5398770 5399138 -23605518 + ROO_LTR LTR Pao 1 388 -40 7 626 525 122 100 0 chrUextra 5399188 5399278 -23605378 + DNAREP1_DM LINE Penelope 496 594 0 7 626 33 25 0 0 chrUextra 5399334 5399374 -23605282 + AT_rich Low_complexity Low_complexity 1 40 0 7 626 3763 2 0 0 chrUextra 5400642 5401074 -23603582 + DOC6_DM LINE Jockey 3791 4222 0 7 626 3827 22 0 2 chrUextra 5401077 5401523 -23603133 + MDG3_I LTR Gypsy 2485 2929 -2057 7 626 2952 12 36 3 chrUextra 5401628 5401965 -23602691 - Invader1_I LTR Gypsy -1245 1941 1594 7 626 4611 15 38 2 chrUextra 5401973 5402503 -23602153 - Invader1_I LTR Gypsy -2549 637 89 7 626 2156 291 19 50 chrUextra 5402622 5403480 -23601176 + MICROPIA_I LTR Gypsy 1394 2224 -2252 7 626 1941 112 65 3 chrUextra 5403585 5403907 -23600749 + PROTOP DNA P 4139 4480 0 7 626 413 103 0 14 chrUextra 5403907 5403963 -23600693 - I_DM LINE I -1032 5199 5145 7 626 4220 26 52 0 chrUextra 5403964 5404465 -23600191 - DMCR1A LINE CR1 0 4470 3944 7 626 2309 187 21 5 chrUextra 5404574 5405440 -23599216 + SAR_DM Satellite Satellite 1 880 -562 7 626 4758 2 0 0 chrUextra 5405547 5406069 -23598587 - FW_DM LINE Jockey -2673 2019 1498 7 626 3144 16 0 0 chrUextra 5406065 5406428 -23598228 + STALKER4_I LTR Gypsy 5749 6111 -419 7 626 4477 20 47 0 chrUextra 5406531 5407409 -23597247 - R1_DM LINE R1 -1534 3822 2904 7 626 7414 30 45 0 chrUextra 5407509 5408390 -23596266 - Gypsy4_I LTR Gypsy -1797 4491 3571 7 626 423 0 0 0 chrUextra 5408490 5408536 -23596120 - TABOR_I LTR Gypsy -6290 46 1 7 626 4719 2 0 0 chrUextra 5408536 5409042 -23595614 - TABOR_LTR LTR Gypsy 0 506 1 7 626 233 0 0 161 chrUextra 5409057 5409268 -23595388 + (CACAA)n Simple_repeat Simple_repeat 4 180 0 7 626 309 238 0 0 chrUextra 5409270 5409371 -23595285 + (CAAA)n Simple_repeat Simple_repeat 4 104 0 7 626 7954 7 9 1 chrUextra 5409471 5410352 -23594304 + Invader4_I LTR Gypsy 394 1281 -1132 7 626 4131 10 0 66 chrUextra 5410455 5410970 -23593686 + T412LTR LTR LTR 1 481 0 7 626 380 0 0 0 chrUextra 5411433 5411477 -23593179 - NOMAD_I LTR Gypsy -6528 44 1 7 626 4800 0 0 0 chrUextra 5411477 5411995 -23592661 - NOMAD_LTR LTR Gypsy 0 518 1 7 626 687 118 0 0 chrUextra 5411997 5412132 -23592524 + (TA)n Simple_repeat Simple_repeat 2 136 0 7 626 894 122 0 0 chrUextra 5412131 5412311 -23592345 + (TTTA)n Simple_repeat Simple_repeat 1 180 0 7 626 3161 154 270 27 chrUextra 5412429 5413292 -23591364 + TART LINE telomeric 9134 10206 -4271 7 626 1732 144 119 71 chrUextra 5413395 5413806 -23590850 - DNAREP1_DM LINE Penelope -163 431 1 7 626 22 56 0 0 chrUextra 5414586 5414622 -23590034 + AT_rich Low_complexity Low_complexity 1 36 0 7 626 337 213 42 92 chrUextra 5414667 5414786 -23589870 + Copia_I LTR Copia 4401 4513 -80 7 626 47 0 0 0 chrUextra 5414873 5414920 -23589736 + AT_rich Low_complexity Low_complexity 1 47 0 7 626 347 322 44 42 chrUextra 5415891 5415923 -23588733 + Gypsy6_I LTR Gypsy 3168 3246 -3766 7 626 1621 33 19 0 chrUextra 5415923 5416137 -23588519 + TLD2 Unknown Unknown 1 218 0 7 626 347 322 44 42 chrUextra 5416137 5416231 -23588425 + Gypsy6_I LTR Gypsy 3247 3488 -3524 7 626 5551 42 148 0 chrUextra 5416338 5417218 -23587438 - TRANSIB2 DNA Transib -905 1939 930 7 626 2988 11 114 0 chrUextra 5417318 5417679 -23586977 + QUASIMODO_LTR LTR Gypsy 83 484 -174 7 626 2273 19 8 0 chrUextra 5417679 5417944 -23586712 + MDG3_LTR LTR Gypsy 1 267 0 7 626 2373 0 0 0 chrUextra 5417943 5418198 -23586458 + MDG3_I LTR Gypsy 1 255 -4731 7 626 7559 20 5 2 chrUextra 5418298 5419178 -23585478 - R1_DM LINE R1 -843 4513 3632 7 626 1253 7 7 7 chrUextra 5419278 5419428 -23585228 - Copia_I LTR Copia -4443 150 1 7 626 251 0 0 0 chrUextra 5419428 5419462 -23585194 - Copia_LTR LTR Copia 0 276 243 7 626 2456 4 0 0 chrUextra 5419462 5419738 -23584918 - Copia_LTR LTR Copia 0 276 1 7 626 2418 25 0 0 chrUextra 5419738 5420020 -23584636 - IDEFIX_LTR LTR Gypsy -312 282 1 7 626 289 98 0 0 chrUextra 5419988 5420029 -23584627 + BARI1 DNA Tc1 3 43 -1707 7 626 21 0 0 0 chrUextra 5420107 5420128 -23584528 + AT_rich Low_complexity Low_complexity 1 21 0 7 626 226 67 0 0 chrUextra 5420128 5420158 -23584498 + Invader1_LTR LTR Gypsy 1 30 -393 7 626 2335 4 4 0 chrUextra 5420261 5420518 -23584138 + QUASIMODO_LTR LTR Gypsy 401 658 0 7 626 1055 0 8 0 chrUextra 5420518 5420633 -23584023 - DM1731_LTR LTR Copia -220 116 1 7 626 3155 82 13 22 chrUextra 5420633 5421082 -23583574 - IDEFIX_LTR LTR Gypsy -149 445 1 7 626 486 36 0 0 chrUextra 5421082 5421138 -23583518 - IDEFIX_I LTR Gypsy 0 5628 5573 7 626 5665 26 38 1 chrUextra 5421238 5422118 -23582538 - R1_DM LINE R1 -2054 3302 2391 7 626 3987 179 19 24 chrUextra 5422218 5423098 -23581558 + SAR_DM Satellite Satellite 355 1230 -242 7 626 830 40 10 0 chrUextra 5423198 5423299 -23581357 + TART LINE telomeric 10562 10663 -3814 7 626 459 80 77 39 chrUextra 5423297 5423375 -23581281 + TART LINE telomeric 10985 11065 -3412 7 626 3762 110 74 84 chrUextra 5423365 5424078 -23580578 + TART LINE telomeric 6985 7690 -6787 7 626 1620 0 0 0 chrUextra 5424181 5424361 -23580295 + (TTGTG)n Simple_repeat Simple_repeat 1 180 0 7 626 4718 2 0 0 chrUextra 5424369 5424875 -23579781 + TABOR_LTR LTR Gypsy 1 506 0 7 626 1557 0 11 6 chrUextra 5424875 5425058 -23579598 + TABOR_I LTR Gypsy 1 184 -6152 7 626 677 276 36 4 chrUextra 5425161 5425583 -23579073 + ROVER-I_DM LTR Gypsy 1371 1934 -4650 7 626 328 280 78 41 chrUextra 5425780 5426022 -23578634 - TV1I LTR Gypsy -4405 1558 1308 7 626 2097 64 7 3 chrUextra 5426138 5426434 -23578222 - I_DM LINE I -5836 395 99 7 626 4108 72 21 2 chrUextra 5426489 5427018 -23577638 + Baggins1 LINE LOA 4205 4743 -710 7 626 877 47 16 0 chrUextra 5427118 5427245 -23577411 - TLD2 Unknown Unknown -30 188 60 7 626 548 328 41 43 chrUextra 5427234 5427700 -23576956 - Gypsy4_I LTR Gypsy -3638 2650 2024 7 626 5142 173 32 0 chrUextra 5428098 5428977 -23575679 + TIRANT_I LTR Gypsy 2751 3657 -4035 7 626 5564 28 0 67 chrUextra 5429078 5429841 -23574815 - NINJA_I LTR Pao -5299 712 1 7 626 925 52 8 8 chrUextra 5429841 5429958 -23574698 - NINJA_LTR LTR Pao 0 317 201 7 626 21 89 0 0 chrUextra 5431542 5431598 -23573058 + AT_rich Low_complexity Low_complexity 1 56 0 7 626 29 47 0 0 chrUextra 5431636 5431679 -23572977 + AT_rich Low_complexity Low_complexity 1 43 0 7 626 28 71 0 0 chrUextra 5431723 5431779 -23572877 + AT_rich Low_complexity Low_complexity 1 56 0 7 626 7730 27 0 0 chrUextra 5432018 5432898 -23571758 + DIVER_I LTR Pao 3912 4791 -852 7 626 5591 21 15 1 chrUextra 5432998 5433669 -23570987 - R1_DM LINE R1 -4066 1290 611 7 626 559 82 0 0 chrUextra 5433805 5433878 -23570778 - DM176_I LTR Gypsy 0 6420 6348 7 626 3204 3 0 0 chrUextra 5433978 5434322 -23570334 - HOBO DNA hAT -2672 344 1 7 626 230 83 0 53 chrUextra 5434797 5434835 -23569821 + TRAM_LTR LTR Pao 273 308 -64 7 626 3840 32 76 1 chrUextra 5434958 5435748 -23568908 + R1_DM LINE R1 4506 5354 -2 7 626 369 108 15 15 chrUextra 5435772 5435838 -23568818 + R1_DM LINE R1 23 88 -5268 7 626 2482 72 6 40 chrUextra 5435938 5436814 -23567842 - DMSAT6 Satellite Satellite -65 845 1 7 626 432 157 0 0 chrUextra 5436918 5436988 -23567668 + ARS406_DM Unknown Unknown 120 189 -164 7 626 3472 179 64 31 chrUextra 5436926 5437795 -23566861 - SAR_DM Satellite Satellite -243 1229 332 7 626 6693 28 147 15 chrUextra 5437898 5438778 -23565878 + ACCORD2_I LTR Gypsy 4611 5606 -1606 7 626 2494 4 0 0 chrUextra 5438879 5439158 -23565498 - R2_DM LINE R2 -2824 783 505 7 626 5659 3 0 0 chrUextra 5439149 5439758 -23564898 - LSU-rRNA_Dme rRNA rRNA -1340 2560 1952 7 626 1464 0 0 0 chrUextra 5439858 5440021 -23564635 + ROO_I LTR Pao 8094 8256 0 7 626 3999 2 0 0 chrUextra 5440021 5440449 -23564207 + ROO_LTR LTR Pao 1 428 0 7 626 746 136 105 8 chrUextra 5440838 5440971 -23563685 - DMCR1A LINE CR1 -1244 3226 3081 7 626 1093 163 102 15 chrUextra 5441058 5441263 -23563393 + DMLTR5 LTR Gypsy 40 262 -4 7 626 2452 107 96 20 chrUextra 5441264 5441713 -23562943 + HMSBEAGLE_I LTR Gypsy 2 484 -6045 7 626 2559 87 39 10 chrUextra 5441818 5442696 -23561960 - DMSAT6 Satellite Satellite -98 903 1 7 626 3939 181 24 11 chrUextra 5442806 5443677 -23560979 - SAR_DM Satellite Satellite -396 1076 195 7 626 2348 18 0 14 chrUextra 5443778 5444066 -23560590 - STALKER4_LTR LTR Gypsy -118 284 1 7 626 2092 264 3 0 chrUextra 5444087 5444658 -23559998 - TOM_I LTR Gypsy -504 5608 5036 7 626 570 14 0 42 chrUextra 5444758 5444830 -23559826 - NTS_DM Other Other -147 93 25 7 626 1274 18 0 12 chrUextra 5444882 5445048 -23559608 - NTS_DM Other Other -39 201 38 7 626 907 9 0 27 chrUextra 5445048 5445160 -23559496 - NTS_DM Other Other -107 133 25 7 626 22 56 0 0 chrUextra 5445186 5445222 -23559434 + AT_rich Low_complexity Low_complexity 1 36 0 7 626 269 125 0 0 chrUextra 5445235 5445275 -23559381 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 626 262 150 0 0 chrUextra 5445318 5445358 -23559298 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 626 262 150 0 0 chrUextra 5445410 5445450 -23559206 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 626 262 150 0 0 chrUextra 5445502 5445542 -23559114 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 7 626 22 56 0 0 chrUextra 5445547 5445583 -23559073 + AT_rich Low_complexity Low_complexity 1 36 0 7 626 2082 183 9 5 chrUextra 5445738 5446494 -23558162 + SAR_DM Satellite Satellite 1 759 -535 7 626 812 62 0 0 chrUextra 5446505 5446618 -23558038 - ARS406_DM Unknown Unknown -189 164 52 7 626 3634 5 2 2 chrUextra 5446718 5447126 -23557530 - Invader1_LTR LTR Gypsy -15 408 1 7 626 3102 99 2 0 chrUextra 5447134 5447598 -23557058 - S_DM DNA Tc1 0 1736 1272 7 626 1072 107 54 33 chrUextra 5447706 5447890 -23556766 - TART LINE telomeric -10607 3870 3683 7 626 4171 82 22 55 chrUextra 5447885 5448571 -23556085 - TART LINE telomeric -11115 3362 2700 7 626 2453 97 5 36 chrUextra 5448678 5449558 -23555098 - DMSAT6 Satellite Satellite -37 852 1 7 626 256 0 0 0 chrUextra 5449658 5449687 -23554969 + R1_DM LINE R1 5328 5356 0 7 626 4830 62 16 15 chrUextra 5449722 5450538 -23554118 + R1_DM LINE R1 2 960 -4396 7 626 71 67 0 0 chrUextra 5450720 5450854 -23553802 + AT_rich Low_complexity Low_complexity 1 134 0 7 626 2740 172 15 17 chrUextra 5451618 5452498 -23552158 + SAR_DM Satellite Satellite 1 878 -577 7 626 860 109 0 0 chrUextra 5452599 5452727 -23551929 + ARS406_DM Unknown Unknown 62 189 -164 7 626 3300 204 21 26 chrUextra 5452624 5453478 -23551178 - SAR_DM Satellite Satellite -203 1269 420 7 626 919 139 90 0 chrUextra 5453578 5453744 -23550912 + TART LINE telomeric 3703 3883 -10594 7 626 4354 110 37 34 chrUextra 5453724 5454458 -23550198 + TART LINE telomeric 5323 6058 -8419 7 626 7785 10 0 5 chrUextra 5454558 5455438 -23549218 - FW_DM LINE Jockey -571 4121 3246 7 626 2766 119 119 0 chrUextra 5455538 5456043 -23548613 + Stalker2_I LTR Gypsy 3310 3874 -3528 7 626 24 32 0 0 chrUextra 5456061 5456092 -23548564 + AT_rich Low_complexity Low_complexity 1 31 0 7 626 255 215 11 151 chrUextra 5456121 5456214 -23548442 + DM176_LTR LTR Gypsy 190 269 -238 7 626 260 194 75 0 chrUextra 5456326 5456393 -23548263 + DM176_LTR LTR Gypsy 295 366 -141 7 626 642 44 0 32 chrUextra 5456518 5456612 -23548044 + QUASIMODO_I LTR Gypsy 1636 1726 -4334 7 626 4506 2 0 2 chrUextra 5456626 5457141 -23547515 + QUASIMODO_I LTR Gypsy 1709 2222 -3838 7 626 558 4 133 0 chrUextra 5457141 5457397 -23547259 + (TA)n Simple_repeat Simple_repeat 1 289 0 7 626 3665 113 52 92 chrUextra 5457500 5458290 -23546366 + PROTOP_B DNA P 396 1153 0 7 626 3012 237 34 31 chrUextra 5458476 5459354 -23545302 - ROVER-I_DM LTR Gypsy -4155 2429 1549 7 626 6449 23 22 0 chrUextra 5459455 5460227 -23544429 + Copia2_I LTR Copia 536 1324 -2838 7 626 810 57 0 0 chrUextra 5460229 5460334 -23544322 + Copia2_I LTR Copia 1628 1732 -2430 7 626 450 30 0 15 chrUextra 5460436 5460503 -23544153 + NTS_DM Other Other 136 201 -39 7 626 907 9 0 27 chrUextra 5460555 5460667 -23543989 + NTS_DM Other Other 25 133 -107 7 626 1304 18 0 6 chrUextra 5460667 5460832 -23543824 + NTS_DM Other Other 38 201 -39 7 626 907 9 0 27 chrUextra 5460884 5460996 -23543660 + NTS_DM Other Other 25 133 -107 7 626 1274 18 0 12 chrUextra 5460996 5461162 -23543494 + NTS_DM Other Other 38 201 -39 7 626 729 11 0 33 chrUextra 5461223 5461313 -23543343 + NTS_DM Other Other 25 111 -129 7 626 201 164 44 15 chrUextra 5461437 5461505 -23543151 + GA-rich Low_complexity Low_complexity 1 70 0 7 626 205 0 87 22 chrUextra 5461926 5461972 -23542684 + (TA)n Simple_repeat Simple_repeat 1 49 0 7 626 1406 90 35 18 chrUextra 5461972 5462199 -23542457 + ROVER-LTR_DM LTR Gypsy 2 232 -135 7 626 3221 102 115 0 chrUextra 5462392 5462936 -23541720 - DMRT1B LINE R1 -1444 3739 3134 7 626 542 262 73 6 chrUextra 5462967 5463132 -23541524 + Gypsy12_I LTR Gypsy 3154 3329 -2217 7 626 442 35 18 0 chrUextra 5463371 5463428 -23541228 - DIVER_I LTR Pao -5585 58 1 7 626 1073 108 9 110 chrUextra 5463449 5463677 -23540979 - DIVER_LTR LTR Pao 0 224 20 7 626 4482 11 0 45 chrUextra 5463676 5464250 -23540406 + STALKER4_I LTR Gypsy 2725 3272 -3258 7 626 248 165 91 70 chrUextra 5464588 5464731 -23539925 + (CAAGA)n Simple_repeat Simple_repeat 3 148 0 7 626 364 217 106 0 chrUextra 5464848 5465009 -23539647 + (CAAGA)n Simple_repeat Simple_repeat 3 180 0 7 626 373 216 105 0 chrUextra 5464941 5465103 -23539553 + (CAGAA)n Simple_repeat Simple_repeat 1 179 0 7 626 345 201 107 0 chrUextra 5465016 5465227 -23539429 + (AATAG)n Simple_repeat Simple_repeat 1 233 0 7 626 2426 115 26 16 chrUextra 5465331 5466208 -23538448 + DMSAT6 Satellite Satellite 1 885 -1 7 626 5991 3 0 1 chrUextra 5466308 5466997 -23537659 - Copia_I LTR Copia -1079 3514 2827 7 626 1652 5 0 5 chrUextra 5467000 5467187 -23537469 - Copia_I LTR Copia -2466 2127 1942 7 626 2942 6 0 0 chrUextra 5467287 5467619 -23537037 - Copia2_I LTR Copia -3830 332 1 7 626 1761 0 0 0 chrUextra 5467622 5467819 -23536837 - Copia2_LTR_DM LTR Copia -1 197 1 7 626 2901 11 26 0 chrUextra 5467819 5468166 -23536490 - Copia2_I LTR Copia 0 4162 3807 7 626 7742 1 11 0 chrUextra 5468266 5469145 -23535511 + Stalker2_I LTR Gypsy 2430 3318 -4084 7 626 380 198 0 19 chrUextra 5469245 5469348 -23535308 + XDMR_DM Unknown Unknown 260 360 0 7 626 3839 183 6 17 chrUextra 5469262 5470124 -23534532 - SAR_DM Satellite Satellite -354 1118 267 7 626 458 0 0 0 chrUextra 5470224 5470274 -23534382 + MDG3_I LTR Gypsy 4937 4986 0 7 626 2396 4 0 0 chrUextra 5470274 5470541 -23534115 + MDG3_LTR LTR Gypsy 1 267 0 7 626 241 114 0 22 chrUextra 5470578 5470623 -23534033 - ROVER-I_DM LTR Gypsy -6390 194 151 7 626 201 74 0 0 chrUextra 5470648 5470675 -23533981 + (T)n Simple_repeat Simple_repeat 1 27 0 7 626 422 165 13 0 chrUextra 5470717 5470796 -23533860 - ROVER-I_DM LTR Gypsy -6504 80 1 7 626 1532 104 49 59 chrUextra 5470796 5471103 -23533553 - ROVER-LTR_DM LTR Gypsy 0 367 64 7 626 2748 3 0 0 chrUextra 5471203 5471531 -23533125 + DOC LINE Jockey 4398 4725 0 7 626 1135 154 14 28 chrUextra 5471553 5471767 -23532889 - Gypsy12_LTR LTR Gypsy -2125 211 1 7 626 2255 82 0 3 chrUextra 5471766 5472058 -23532598 - Gypsy12_I LTR Gypsy 0 5546 5256 7 626 229 0 0 0 chrUextra 5472056 5472082 -23532574 - Gypsy12_I LTR Gypsy -887 4659 4634 7 626 673 26 0 0 chrUextra 5472182 5472259 -23532397 - Baggins1 LINE LOA -62 5391 5315 7 626 1793 33 124 0 chrUextra 5472255 5472496 -23532160 - Baggins1 LINE LOA -456 4997 4727 7 626 27 29 0 0 chrUextra 5472735 5472769 -23531887 + AT_rich Low_complexity Low_complexity 1 34 0 7 626 809 29 10 0 chrUextra 5473161 5473264 -23531392 + G5A_DM LINE Jockey 2735 2838 -3 7 626 383 269 0 0 chrUextra 5473290 5473398 -23531258 - Gypsy7_I LTR Gypsy -3317 1667 1560 7 626 418 315 68 29 chrUextra 5473441 5473752 -23530904 - Gypsy7_I LTR Gypsy -3496 1488 1166 7 626 1631 31 0 5 chrUextra 5473848 5474040 -23530616 - PROTOP DNA P -1 4479 4289 7 626 3582 191 26 19 chrUextra 5474140 5475019 -23529637 - SAR_DM Satellite Satellite -315 1157 273 7 626 2321 73 3 68 chrUextra 5475119 5475487 -23529169 - Invader3_I LTR Gypsy -2989 1899 1556 7 626 2574 39 0 0 chrUextra 5475488 5475793 -23528863 - Invader3_I LTR Gypsy -4081 807 503 7 626 1776 25 0 0 chrUextra 5475795 5475998 -23528658 - Invader3_I LTR Gypsy -4680 208 6 7 626 3428 213 13 22 chrUextra 5476098 5476977 -23527679 + SAR_DM Satellite Satellite 1 870 -203 7 626 3994 177 8 13 chrUextra 5478062 5478933 -23525723 + SAR_DM Satellite Satellite 195 1061 -411 7 626 5318 44 75 0 chrUextra 5479114 5479914 -23524742 - DMCR1A LINE CR1 -3061 1409 550 7 626 7586 5 9 7 chrUextra 5480014 5480892 -23523764 + MAX_I LTR Pao 814 1693 -6221 7 626 7725 1 1 0 chrUextra 5480992 5481870 -23522786 + TABOR_I LTR Gypsy 2145 3023 -3313 7 626 2908 70 7 17 chrUextra 5482398 5482803 -23521853 - Baggins1 LINE LOA -262 5191 4791 7 626 2082 178 5 15 chrUextra 5482949 5483343 -23521313 + TAHRE LINE telomeric 9825 10214 -249 7 626 2226 34 3 82 chrUextra 5483926 5484244 -23520412 - LSU-rRNA_Dme rRNA rRNA -3606 294 2 7 626 28 79 0 0 chrUextra 5484257 5484320 -23520336 + AT_rich Low_complexity Low_complexity 1 63 0 7 626 22 56 0 0 chrUextra 5484535 5484571 -23520085 + AT_rich Low_complexity Low_complexity 1 36 0 7 626 1158 140 2 0 chrUextra 5484914 5485327 -23519329 + (TA)n Simple_repeat Simple_repeat 1 413 0 7 626 1158 122 0 0 chrUextra 5485347 5485527 -23519129 + (TA)n Simple_repeat Simple_repeat 1 180 0 7 626 2289 8 4 0 chrUextra 5485527 5485782 -23518874 - DMLTR5 LTR Gypsy 0 266 11 7 626 1355 6 0 18 chrUextra 5485886 5486051 -23518605 + NTS_DM Other Other 1 162 -78 7 626 513 103 39 0 chrUextra 5486167 5486245 -23518411 + NTS_DM Other Other 10 90 -150 7 626 4449 8 0 0 chrUextra 5486255 5486760 -23517896 + DM176_LTR LTR Gypsy 1 505 -2 7 626 2830 183 68 19 chrUextra 5486871 5487719 -23516937 - TART LINE telomeric -4827 9650 8957 7 626 536 169 23 125 chrUextra 5487840 5488016 -23516640 + FB4_DM DNA Tc1 912 1069 -3020 7 626 1154 147 80 35 chrUextra 5488070 5488359 -23516297 + FB4_DM DNA Tc1 2898 3199 -890 7 626 2621 83 9 40 chrUextra 5488816 5489694 -23514962 + DMSAT6 Satellite Satellite 1 850 -37 7 626 1436 130 121 16 chrUextra 5489863 5490226 -23514430 + DNAREP1_DM LINE Penelope 1 332 -262 7 626 984 125 54 0 chrUextra 5490228 5490396 -23514260 - DMCR1A LINE CR1 -171 4299 4123 7 626 334 226 275 7 chrUextra 5490419 5490557 -23514099 + Gypsy_I LTR Gypsy 1098 1272 -5235 7 626 3317 191 55 23 chrUextra 5490772 5491650 -23513006 - SAR_DM Satellite Satellite -269 1203 298 7 626 1443 294 22 18 chrUextra 5491753 5492336 -23512320 + MICROPIA_I LTR Gypsy 2393 2970 -1506 7 626 445 288 1 17 chrUextra 5492330 5492493 -23512163 + MICROPIA_I LTR Gypsy 1526 1655 -1531 7 626 452 231 128 40 chrUextra 5492476 5492625 -23512031 + MICROPIA_I LTR Gypsy 3145 3306 -1170 7 626 2788 50 0 3 chrUextra 5492728 5493070 -23511586 + BATUMI_I LTR Pao 3741 4081 -3882 7 626 4538 35 0 0 chrUextra 5493066 5493606 -23511050 + BATUMI_I LTR Pao 4585 5124 -2839 7 626 1470 29 0 0 chrUextra 5493706 5493914 -23510742 + (TATAA)n Simple_repeat Simple_repeat 1 208 0 7 626 1136 100 0 16 chrUextra 5493936 5494119 -23510537 + (CAATA)n Simple_repeat Simple_repeat 1 180 0 7 626 1405 28 11 0 chrUextra 5494138 5494316 -23510340 + (CAATA)n Simple_repeat Simple_repeat 1 180 0 7 626 1533 26 0 0 chrUextra 5494316 5494584 -23510072 + (TATAA)n Simple_repeat Simple_repeat 1 268 0 7 626 614 0 0 0 chrUextra 5494684 5494758 -23509898 + DM1731_I LTR Copia 3903 3976 0 7 626 2788 39 0 0 chrUextra 5494758 5495094 -23509562 + DM1731_LTR LTR Copia 1 336 0 7 626 1873 191 47 9 chrUextra 5495098 5495562 -23509094 - SAR_DM Satellite Satellite -658 814 333 7 626 2517 92 40 16 chrUextra 5495705 5496540 -23508116 + DMSAT6 Satellite Satellite 1 855 -3 7 626 1605 48 35 9 chrUextra 5496640 5496869 -23507787 - IDEFIX_LTR LTR Gypsy -357 237 3 7 626 415 151 86 0 chrUextra 5497049 5497142 -23507514 + DNAREP1_DM LINE Penelope 182 282 -312 7 626 344 87 0 0 chrUextra 5497168 5497214 -23507442 + DNAREP1_DM LINE Penelope 350 395 -199 7 626 500 176 15 15 chrUextra 5497253 5497386 -23507270 - PROTOP_B DNA P -705 448 316 7 626 7506 16 2 0 chrUextra 5497618 5498496 -23506160 + STALKER4_I LTR Gypsy 1868 2747 -3783 7 626 2144 176 11 9 chrUextra 5498601 5499064 -23505592 - SAR_DM Satellite Satellite -396 1076 613 7 626 232 108 0 0 chrUextra 5499032 5499069 -23505587 + ARS406_DM Unknown Unknown 1 37 -316 7 626 2009 157 8 10 chrUextra 5499082 5499474 -23505182 - SAR_DM Satellite Satellite -439 1033 643 7 626 1336 47 47 10 chrUextra 5499574 5499766 -23504890 - ROVER-LTR_DM LTR Gypsy -168 199 1 7 626 239 160 264 57 chrUextra 5499766 5499857 -23504799 + STALKER4_LTR LTR Gypsy 261 373 -29 7 626 535 47 22 56 chrUextra 5499910 5500000 -23504656 + STALKER4_I LTR Gypsy 17 103 -6427 7 626 2697 135 9 16 chrUextra 5500000 5500452 -23504204 + STALKER4_I LTR Gypsy 148 596 -5934 7 626 781 0 0 0 chrUextra 5500552 5500636 -23504020 - MICROPIA_I LTR Gypsy -4392 84 1 7 626 3249 11 2 75 chrUextra 5500636 5501050 -23503606 - MICROPIA_LTR LTR Gypsy 0 476 93 7 626 1753 33 191 0 chrUextra 5501053 5501113 -23503543 + ACCORD2_I LTR Gypsy 1081 1140 -6072 7 626 255 79 0 0 chrUextra 5501113 5501151 -23503505 + (TAA)n Simple_repeat Simple_repeat 2 39 0 7 626 1753 33 191 0 chrUextra 5501151 5501331 -23503325 + ACCORD2_I LTR Gypsy 1141 1366 -5846 7 626 1301 82 18 0 chrUextra 5501530 5501700 -23502956 - DIVER2_I LTR Pao -256 3891 3719 7 626 5392 47 0 33 chrUextra 5501677 5502375 -23502281 - DIVER2_I LTR Pao -2572 1575 901 7 626 2379 24 0 16 chrUextra 5502515 5502818 -23501838 - NINJA_I LTR Pao -5713 298 1 7 626 2524 44 3 28 chrUextra 5502818 5503143 -23501513 - NINJA_LTR LTR Pao 0 317 1 7 626 1014 100 21 32 chrUextra 5503162 5503348 -23501308 + ACCORD2_I LTR Gypsy 1543 1726 -5486 7 626 6783 39 1 32 chrUextra 5503486 5504364 -23500292 - R1_DM LINE R1 -4085 1271 421 7 78 7182 31 33 12 chrUextra 5504465 5505342 -23499314 - DMCR1A LINE CR1 -1540 2930 2036 7 627 2889 62 5 30 chrUextra 5505442 5505844 -23498812 - ROO_I LTR Pao -7751 505 114 7 627 3574 36 17 2 chrUextra 5505877 5506299 -23498357 - ROO_LTR LTR Pao 0 428 1 7 627 7130 26 0 0 chrUextra 5506420 5507222 -23497434 + DIVER_I LTR Pao 4842 5643 0 7 627 567 67 0 13 chrUextra 5507222 5507298 -23497358 + DIVER_LTR LTR Pao 1 75 -149 7 627 3601 14 0 0 chrUextra 5507398 5507827 -23496829 + DM176_I LTR Gypsy 5992 6420 0 7 627 3492 21 42 33 chrUextra 5507827 5508276 -23496380 + DM176_LTR LTR Gypsy 1 453 -54 7 627 271 266 45 45 chrUextra 5508377 5508536 -23496120 - DM176_I LTR Gypsy -3724 2696 2641 7 627 2131 51 78 81 chrUextra 5508477 5508798 -23495858 - CIRCE LINE Composite -5064 1292 973 7 627 2538 64 0 0 chrUextra 5508940 5509252 -23495404 - CIRCE LINE Composite -5386 970 659 7 627 3341 133 57 43 chrUextra 5509354 5510230 -23494426 + STALKER4_I LTR Gypsy 292 1246 -5284 7 627 4117 25 0 0 chrUextra 5510332 5510807 -23493849 + FW_DM LINE Jockey 289 763 -3929 7 627 3610 7 0 10 chrUextra 5510801 5511210 -23493446 + FW_DM LINE Jockey 1828 2232 -2460 7 627 2426 120 9 39 chrUextra 5512288 5513162 -23491494 + DMSAT6 Satellite Satellite 1 847 -97 7 627 1222 0 0 12 chrUextra 5514248 5514411 -23490245 + BLOOD_I LTR Gypsy 6453 6613 0 7 627 3725 0 0 5 chrUextra 5514411 5514812 -23489844 + BLOOD_LTR LTR Gypsy 1 399 0 7 627 896 44 9 0 chrUextra 5514812 5514911 -23489745 + DM297_I LTR Gypsy 1993 2092 -4075 7 627 1847 9 0 0 chrUextra 5514906 5515122 -23489534 + DM297_I LTR Gypsy 5926 6141 -26 7 627 1919 0 0 0 chrUextra 5515222 5515426 -23489230 + LSU-rRNA_Dme rRNA rRNA 2443 2646 -1254 7 627 3608 0 0 0 chrUextra 5515436 5515827 -23488829 + R1_DM LINE R1 4966 5356 0 7 627 2427 0 0 4 chrUextra 5515830 5516100 -23488556 + R1_DM LINE R1 2994 3262 -2094 7 627 2144 157 22 5 chrUextra 5516200 5516609 -23488047 - SAR_DM Satellite Satellite -680 792 377 7 627 2176 35 3 31 chrUextra 5516605 5516896 -23487760 + BATUMI_I LTR Pao 7002 7284 -679 7 627 1387 61 6 6 chrUextra 5516896 5517078 -23487578 + BATUMI_I LTR Pao 1 182 -7781 7 627 3840 181 13 20 chrUextra 5517195 5518056 -23486600 + SAR_DM Satellite Satellite 326 1180 -292 7 627 21 57 0 0 chrUextra 5518482 5518517 -23486139 + AT_rich Low_complexity Low_complexity 1 35 0 7 627 6759 49 11 22 chrUextra 5519134 5520012 -23484644 + R1_DM LINE R1 525 1393 -3963 7 627 7735 2 0 17 chrUextra 5520112 5520990 -23483666 - DM412 LTR Gypsy -3473 3424 2562 7 627 457 37 0 0 chrUextra 5521913 5521967 -23482689 - MAX_I LTR Pao -3882 4032 3979 7 627 195 114 0 0 chrUextra 5522909 5522944 -23481712 + (TA)n Simple_repeat Simple_repeat 1 35 0 7 627 725 209 6 19 chrUextra 5523427 5523583 -23481073 - HETRP_DM Satellite Satellite -190 1682 1529 7 627 7427 30 0 9 chrUextra 5524021 5524898 -23479758 - R1_DM LINE R1 -3144 2212 1344 7 627 2405 130 97 42 chrUextra 5524998 5525508 -23479148 + BATUMI_I LTR Pao 100 641 -7322 7 627 3259 3 0 3 chrUextra 5525508 5525875 -23478781 + QUASIMODO_LTR LTR Gypsy 1 366 -292 7 627 3510 194 12 16 chrUextra 5525983 5526852 -23477804 - SAR_DM Satellite Satellite -514 865 1 7 627 2599 87 13 2 chrUextra 5526953 5527346 -23477310 + MDG1_I LTR Gypsy 741 1137 -5459 7 627 1383 7 0 0 chrUextra 5527409 5527560 -23477096 - Invader2_LTR LTR Gypsy 0 266 116 7 627 2242 4 0 0 chrUextra 5527561 5527829 -23476827 - Invader2_I LTR Gypsy -219 4373 4106 7 627 534 0 0 0 chrUextra 5527929 5527993 -23476663 + TABOR_I LTR Gypsy 6273 6336 0 7 627 4742 0 0 0 chrUextra 5527991 5528497 -23476159 + TABOR_LTR LTR Gypsy 1 506 0 7 627 1024 42 0 40 chrUextra 5528497 5528619 -23476037 + STALKER4_I LTR Gypsy 6415 6530 0 7 627 1638 5 0 5 chrUextra 5528619 5528806 -23475850 + STALKER4_LTR LTR Gypsy 1 186 -216 7 627 3846 251 6 9 chrUextra 5528906 5529782 -23474874 - Gypsy2_I LTR Gypsy -3548 2587 1715 7 627 1971 8 17 13 chrUextra 5529897 5530136 -23474520 - NTS_DM Other Other 0 240 1 7 627 5266 3 0 0 chrUextra 5530186 5530760 -23473896 - R1_DM LINE R1 -775 4581 4008 7 627 7901 15 12 0 chrUextra 5530860 5531737 -23472919 - Invader1_I LTR Gypsy -1552 1634 747 7 627 267 215 11 151 chrUextra 5531867 5531960 -23472696 - DM176_LTR LTR Gypsy -238 269 190 7 627 2715 66 19 8 chrUextra 5532012 5532377 -23472279 - MDG1_I LTR Gypsy -827 5769 5401 7 627 2476 58 36 6 chrUextra 5532383 5532714 -23471942 - DM297_I LTR Gypsy -1816 4351 4011 7 627 3818 181 15 21 chrUextra 5532814 5533668 -23470988 + SAR_DM Satellite Satellite 333 1181 -291 7 627 251 81 27 0 chrUextra 5533654 5533691 -23470965 - ARS406_DM Unknown Unknown -164 189 152 7 627 1164 276 26 34 chrUextra 5533792 5534300 -23470356 - ROVER-I_DM LTR Gypsy -5362 1222 392 7 627 211 291 8 23 chrUextra 5534462 5534592 -23470064 + (TTTA)n Simple_repeat Simple_repeat 2 129 0 7 627 7455 35 7 6 chrUextra 5534768 5535645 -23469011 + BATUMI_I LTR Pao 5470 6347 -1616 7 627 3392 199 53 17 chrUextra 5535745 5536609 -23468047 + SAR_DM Satellite Satellite 375 1269 -203 7 627 811 112 0 0 chrUextra 5536506 5536622 -23468034 - ARS406_DM Unknown Unknown -164 189 74 7 627 3524 202 35 8 chrUextra 5536723 5537582 -23467074 + SAR_DM Satellite Satellite 195 1076 -396 7 627 1006 324 50 49 chrUextra 5537705 5537893 -23466763 + Gypsy4_I LTR Gypsy 2431 2679 -3609 7 627 1771 9 9 0 chrUextra 5537893 5538109 -23466547 + TLD2 Unknown Unknown 1 218 0 7 627 1006 324 50 49 chrUextra 5538109 5538576 -23466080 + Gypsy4_I LTR Gypsy 2680 3302 -2986 7 627 3563 152 51 55 chrUextra 5538676 5539553 -23465103 - HETA LINE telomeric -381 5700 4956 7 627 2015 320 26 18 chrUextra 5539714 5540530 -23464126 + MICROPIA_I LTR Gypsy 1999 2820 -1656 7 627 4346 26 4 0 chrUextra 5540630 5541133 -23463523 + R1_DM LINE R1 4194 4698 -658 7 627 1818 24 14 0 chrUextra 5541137 5541349 -23463307 + R1_DM LINE R1 5142 5356 0 7 627 924 80 8 0 chrUextra 5541382 5541507 -23463149 + R1_DM LINE R1 1 126 -5230 7 627 5517 82 47 26 chrUextra 5541608 5542484 -23462172 + STALKER4_I LTR Gypsy 634 1527 -5003 7 627 2623 6 0 90 chrUextra 5542584 5542928 -23461728 + MICROPIA_LTR LTR Gypsy 164 476 0 7 627 2511 15 99 0 chrUextra 5542928 5543461 -23461195 + MICROPIA_I LTR Gypsy 1 586 -3890 7 627 3675 5 0 2 chrUextra 5543578 5543981 -23460675 + STALKER4_LTR LTR Gypsy 1 402 0 7 627 230 61 0 29 chrUextra 5543981 5544015 -23460641 + STALKER4_I LTR Gypsy 1 33 -6497 7 627 493 179 0 0 chrUextra 5544538 5544622 -23460034 - HETRP_DM Satellite Satellite -260 1612 1529 7 627 740 216 6 19 chrUextra 5544785 5544941 -23459715 - HETRP_DM Satellite Satellite -190 1682 1529 7 627 758 203 51 92 chrUextra 5545094 5545311 -23459345 - HETRP_DM Satellite Satellite -190 1682 1475 7 627 1797 34 0 4 chrUextra 5545516 5545754 -23458902 + QUASIMODO_I LTR Gypsy 5491 5727 -333 7 627 2746 119 18 38 chrUextra 5545797 5546297 -23458359 + QUASIMODO_LTR LTR Gypsy 26 658 0 7 627 4121 102 97 82 chrUextra 5546492 5547369 -23457287 - PROTOP_B DNA P -174 979 90 7 627 190 0 67 0 chrUextra 5547814 5547844 -23456812 + (TA)n Simple_repeat Simple_repeat 1 32 0 7 627 3078 28 42 0 chrUextra 5547986 5548346 -23456310 + PROTOP DNA P 1 375 -4105 7 627 249 222 27 27 chrUextra 5549169 5549243 -23455413 - Gypsy4_I LTR Gypsy -1891 4397 4324 7 627 328 55 365 14 chrUextra 5549430 5549504 -23455152 - DM297_LTR LTR Gypsy -314 100 1 7 627 22 88 0 0 chrUextra 5549540 5549597 -23455059 + AT_rich Low_complexity Low_complexity 1 57 0 7 627 23 68 0 0 chrUextra 5549881 5549925 -23454731 + AT_rich Low_complexity Low_complexity 1 44 0 7 627 25 65 0 0 chrUextra 5550125 5550171 -23454485 + AT_rich Low_complexity Low_complexity 1 46 0 7 627 648 39 0 0 chrUextra 5550191 5550268 -23454388 + TRANSIB2 DNA Transib 441 517 -2327 7 627 283 29 0 0 chrUextra 5550266 5550300 -23454356 + TRANSIB2 DNA Transib 840 873 -1971 7 627 2544 96 32 26 chrUextra 5550400 5551277 -23453379 - DMSAT6 Satellite Satellite -24 882 1 7 627 1344 17 22 22 chrUextra 5551377 5551561 -23453095 + NTS_DM Other Other 57 240 0 7 627 761 40 61 0 chrUextra 5551561 5551643 -23453013 + NTS_DM Other Other 1 88 -152 7 627 1909 129 66 69 chrUextra 5551643 5552051 -23452605 - Gypsy6_LTR LTR Gypsy 0 407 1 7 627 1215 6 25 19 chrUextra 5552051 5552212 -23452444 + NTS_DM Other Other 79 240 0 7 627 392 0 0 0 chrUextra 5552212 5552254 -23452402 + NTS_DM Other Other 1 42 -198 7 627 2379 19 0 0 chrUextra 5552354 5552625 -23452031 + G5_DM LINE Jockey 2816 3086 -1770 7 627 3900 25 0 0 chrUextra 5552622 5553070 -23451586 + G5_DM LINE Jockey 2699 3146 -1710 7 627 1484 6 0 0 chrUextra 5553070 5553230 -23451426 - FW_DM LINE Jockey -360 4332 4173 7 627 3971 189 7 8 chrUextra 5553347 5554206 -23450450 - SAR_DM Satellite Satellite -396 1076 219 7 627 460 321 0 0 chrUextra 5554307 5554491 -23450165 - OSVALDO_I LTR Gypsy -3929 2724 2541 7 627 411 303 45 0 chrUextra 5554529 5554661 -23449995 - OSVALDO_I LTR Gypsy -4172 2481 2344 7 627 457 298 145 0 chrUextra 5554680 5554928 -23449728 - OSVALDO_I LTR Gypsy -4464 2189 1906 7 627 332 137 173 27 chrUextra 5554926 5555001 -23449655 - Gypsy8_I LTR Gypsy -3330 1017 932 7 627 1446 78 16 0 chrUextra 5554990 5555182 -23449474 - Gypsy8_I LTR Gypsy -3867 480 286 7 627 240 149 203 0 chrUextra 5555286 5555360 -23449296 + Invader1_I LTR Gypsy 1063 1151 -2035 7 627 1909 307 10 53 chrUextra 5555343 5556158 -23448498 + MICROPIA_I LTR Gypsy 1682 2461 -2015 7 627 7791 17 7 1 chrUextra 5556258 5557134 -23447522 - BATUMI_I LTR Pao -2233 5730 4850 7 627 1988 48 10 0 chrUextra 5557234 5557617 -23447039 - DMCR1A LINE CR1 -149 4321 3896 7 627 709 242 114 55 chrUextra 5557617 5558110 -23446546 + DM297_I LTR Gypsy 92 613 -5554 7 627 3518 196 11 19 chrUextra 5558210 5559086 -23445570 - SAR_DM Satellite Satellite -471 869 1 7 627 479 122 100 0 chrUextra 5559673 5559763 -23444893 + DNAREP1_DM LINE Penelope 496 594 0 7 627 33 25 0 0 chrUextra 5559817 5559857 -23444799 + AT_rich Low_complexity Low_complexity 1 40 0 7 627 1098 0 0 8 chrUextra 5560909 5561038 -23443618 + Invader4_LTR LTR Gypsy 1 128 -218 7 627 22 0 0 0 chrUextra 5561849 5561871 -23442785 + AT_rich Low_complexity Low_complexity 1 22 0 7 627 583 65 0 0 chrUextra 5561937 5562014 -23442642 - NINJA_LTR LTR Pao 0 317 241 7 627 2484 291 8 8 chrUextra 5562114 5562980 -23441676 - TIRANT_I LTR Gypsy -3672 4020 3155 7 627 2852 30 0 0 chrUextra 5563090 5563455 -23441201 - QUASIMODO_I LTR Gypsy -4628 1432 1068 7 627 4000 8 37 0 chrUextra 5563453 5563966 -23440690 + QUASIMODO_I LTR Gypsy 3500 4031 -2029 7 627 2368 108 31 24 chrUextra 5564066 5564942 -23439714 - DMSAT6 Satellite Satellite -266 882 1 7 627 46 0 0 0 chrUextra 5565182 5565228 -23439428 + AT_rich Low_complexity Low_complexity 1 46 0 7 627 1076 20 0 0 chrUextra 5566018 5566164 -23438492 - QUASIMODO_I LTR Gypsy -422 5638 5493 7 627 983 68 34 0 chrUextra 5566175 5566322 -23438334 - QUASIMODO_I LTR Gypsy -885 5175 5024 7 627 1699 0 0 0 chrUextra 5566322 5566520 -23438136 - Copia2_LTR_DM LTR Copia 0 198 1 7 627 2035 16 0 0 chrUextra 5566520 5566778 -23437878 - Copia2_I LTR Copia 0 4162 3905 7 627 976 24 8 0 chrUextra 5566770 5566894 -23437762 - Copia2_I LTR Copia -1572 2590 2466 7 627 2471 23 0 0 chrUextra 5566994 5567294 -23437362 + R1_DM LINE R1 3950 4249 -1107 7 627 4296 31 74 0 chrUextra 5567289 5567869 -23436787 + R1_DM LINE R1 458 1080 -4276 7 627 5546 5 0 5 chrUextra 5567969 5568622 -23436034 - G2_DM LINE Jockey -1366 1736 1087 7 627 1076 7 26 19 chrUextra 5568619 5568775 -23435881 + NTS_DM Other Other 83 239 -1 7 627 565 15 0 0 chrUextra 5568777 5568844 -23435812 + NTS_DM Other Other 1 67 -173 7 627 2393 94 15 15 chrUextra 5568944 5569816 -23434840 - DMSAT6 Satellite Satellite -72 871 1 7 627 21 89 0 0 chrUextra 5569976 5570032 -23434624 + AT_rich Low_complexity Low_complexity 1 56 0 7 627 2878 171 14 9 chrUextra 5570896 5571766 -23432890 - SAR_DM Satellite Satellite -593 873 1 7 627 3152 102 41 26 chrUextra 5571869 5572744 -23431912 + TART LINE telomeric 4827 6270 -8207 7 627 3336 184 16 25 chrUextra 5572848 5573717 -23430939 - SAR_DM Satellite Satellite -313 1159 299 7 627 5201 67 17 3 chrUextra 5573859 5574582 -23430074 + R1_DM LINE R1 1 733 -4623 7 627 863 69 0 0 chrUextra 5574578 5574694 -23429962 + R1_DM LINE R1 1224 1339 -4017 7 627 4661 11 0 33 chrUextra 5574794 5575375 -23429281 + Gypsy12_LTR LTR Gypsy 1775 2336 0 7 627 2259 34 0 7 chrUextra 5575375 5575668 -23428988 + Gypsy12_I LTR Gypsy 1 291 -5255 7 627 3968 88 10 5 chrUextra 5575769 5576376 -23428280 + IDEFIX_I LTR Gypsy 3308 3917 -1711 7 627 1767 64 29 25 chrUextra 5576370 5576644 -23428012 + IDEFIX_I LTR Gypsy 4192 4466 -1162 7 627 1396 18 0 0 chrUextra 5576744 5576910 -23427746 - PROTOP_A DNA P -939 166 1 7 627 396 205 287 18 chrUextra 5577065 5577229 -23427427 - DNAREP1_DM LINE Penelope -176 418 211 7 627 648 113 204 0 chrUextra 5577242 5577384 -23427272 - DNAREP1_DM LINE Penelope -423 171 1 7 627 2897 0 0 0 chrUextra 5577719 5578053 -23426603 - MICROPIA_I LTR Gypsy -315 4161 3828 7 627 4623 6 0 7 chrUextra 5578052 5578593 -23426063 - MICROPIA_I LTR Gypsy -986 3490 2954 7 627 3045 188 91 26 chrUextra 5578694 5579569 -23425087 + Gypsy12_LTR LTR Gypsy 1327 2258 -78 7 627 1620 0 0 0 chrUextra 5579669 5579981 -23424675 + (GAGAA)n Simple_repeat Simple_repeat 1 312 0 7 627 7542 1 2 2 chrUextra 5580644 5581519 -23423137 + SSU-rRNA_Dme rRNA rRNA 928 1802 -193 7 627 23 68 0 0 chrUextra 5582324 5582368 -23422288 + AT_rich Low_complexity Low_complexity 1 44 0 7 627 26 30 0 0 chrUextra 5582414 5582447 -23422209 + AT_rich Low_complexity Low_complexity 1 33 0 7 627 7527 2 16 1 chrUextra 5582594 5583469 -23421187 - R2_DM LINE R2 -1212 2395 1508 7 627 1159 12 175 0 chrUextra 5583569 5583735 -23420921 - IDEFIX_LTR LTR Gypsy -399 195 1 7 627 1992 62 0 7 chrUextra 5583736 5584029 -23420627 - IDEFIX_I LTR Gypsy -2 5626 5336 7 627 3134 34 5 7 chrUextra 5584003 5584444 -23420212 - IDEFIX_I LTR Gypsy -407 5221 4782 7 627 1158 121 0 0 chrUextra 5585071 5585294 -23419362 + (TA)n Simple_repeat Simple_repeat 1 223 0 7 627 1004 8 0 0 chrUextra 5585295 5585418 -23419238 + DM176_LTR LTR Gypsy 1 123 -384 7 627 193 0 94 0 chrUextra 5586686 5586718 -23417938 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 7 627 2056 135 115 17 chrUextra 5586908 5587369 -23417287 - DM297_I LTR Gypsy -1136 5031 4526 7 627 1459 193 15 11 chrUextra 5587541 5588343 -23416313 + SAR_DM Satellite Satellite 1 804 -645 7 627 868 83 6 17 chrUextra 5588444 5589065 -23415591 - RSP Satellite Satellite -78 614 1 7 627 644 88 51 19 chrUextra 5589091 5589317 -23415339 - RSP Satellite Satellite 0 233 1 7 627 2141 115 98 37 chrUextra 5589445 5590138 -23414518 + Gypsy12_I LTR Gypsy 171 976 -4570 7 627 388 268 8 0 chrUextra 5590145 5590272 -23414384 + DM297_I LTR Gypsy 3337 3464 -2703 7 627 2887 3 3 3 chrUextra 5590394 5590737 -23413919 - R1_DM LINE R1 -1476 3880 3538 7 627 4639 2 0 0 chrUextra 5590738 5591269 -23413387 - LSU-rRNA_Dme rRNA rRNA -1305 2595 2065 7 627 1604 70 126 0 chrUextra 5591450 5591830 -23412826 - PROTOP DNA P -1279 3201 2774 7 627 3163 38 0 2 chrUextra 5591831 5592231 -23412425 + STALKER4_LTR LTR Gypsy 1 399 -3 7 627 633 25 0 0 chrUextra 5592351 5592431 -23412225 - ARS406_DM Unknown Unknown -184 169 90 7 627 2958 201 13 32 chrUextra 5592430 5593218 -23411438 + SAR_DM Satellite Satellite 1 773 -208 7 627 302 259 81 19 chrUextra 5593628 5593789 -23410867 + QUASIMODO_I LTR Gypsy 1315 1485 -4575 7 627 824 253 51 0 chrUextra 5593932 5594189 -23410467 + QUASIMODO_I LTR Gypsy 1815 2084 -3976 7 627 1356 65 2 3 chrUextra 5594296 5594880 -23409776 + (ATAAG)n Simple_repeat Simple_repeat 1 583 0 7 627 1350 45 0 0 chrUextra 5594892 5595070 -23409586 + (ATAAG)n Simple_repeat Simple_repeat 1 178 0 7 627 505 28 0 27 chrUextra 5595095 5595168 -23409488 + (ATAAG)n Simple_repeat Simple_repeat 5 75 0 7 627 21 0 0 0 chrUextra 5595447 5595468 -23409188 + AT_rich Low_complexity Low_complexity 1 21 0 7 627 262 31 0 0 chrUextra 5595484 5595516 -23409140 - NTS_DM Other Other -207 33 2 7 627 6689 9 7 11 chrUextra 5596242 5597116 -23407540 + MAX_I LTR Pao 337 1206 -6708 7 627 4628 2 0 0 chrUextra 5597216 5597756 -23406900 + FW_DM LINE Jockey 4153 4692 0 7 627 2737 9 0 6 chrUextra 5597765 5598090 -23406566 - Gypsy2_LTR LTR Gypsy 0 353 31 7 627 4942 45 84 39 chrUextra 5598295 5599064 -23405592 - TRANSIB2 DNA Transib -624 2220 1417 7 627 3778 173 9 8 chrUextra 5599191 5600037 -23404619 - SAR_DM Satellite Satellite -396 1076 230 7 627 7012 36 6 1 chrUextra 5600140 5601012 -23403644 - Baggins1 LINE LOA -3285 2168 1293 7 627 1737 302 24 17 chrUextra 5601112 5601867 -23402789 + Invader1_I LTR Gypsy 1810 2569 -617 7 627 2308 11 0 0 chrUextra 5602086 5602362 -23402294 - FW_DM LINE Jockey -1438 3254 2979 7 627 2313 84 55 30 chrUextra 5602372 5602957 -23401699 + DMSAT6 Satellite Satellite 1 599 0 7 627 253 0 0 0 chrUextra 5603060 5603090 -23401566 + ACCORD2_I LTR Gypsy 1055 1084 -6128 7 627 3844 11 0 61 chrUextra 5603090 5603597 -23401059 - MICROPIA_LTR LTR Gypsy 0 476 1 7 627 2722 12 0 3 chrUextra 5603597 5603934 -23400722 - MICROPIA_I LTR Gypsy 0 4476 4141 7 627 1958 33 0 0 chrUextra 5604034 5604278 -23400378 + R1_DM LINE R1 1418 1661 -3695 7 627 5230 30 0 0 chrUextra 5604265 5604908 -23399748 + R1_DM LINE R1 1907 2549 -2807 7 627 4288 2 0 0 chrUextra 5605008 5605539 -23399117 + DOC6_DM LINE Jockey 3692 4222 0 7 627 26 30 0 0 chrUextra 5605633 5605666 -23398990 + AT_rich Low_complexity Low_complexity 1 33 0 7 627 58 15 0 0 chrUextra 5606079 5606144 -23398512 + AT_rich Low_complexity Low_complexity 1 65 0 7 627 58 15 0 0 chrUextra 5606625 5606690 -23397966 + AT_rich Low_complexity Low_complexity 1 65 0 7 627 3542 178 19 18 chrUextra 5606957 5607827 -23396829 + SAR_DM Satellite Satellite 252 1122 -350 7 627 1933 0 8 21 chrUextra 5607933 5608171 -23396485 + DM1731_I LTR Copia 3742 3976 0 7 627 2537 34 34 0 chrUextra 5608171 5608496 -23396160 + DM1731_LTR LTR Copia 1 336 0 7 627 246 98 0 0 chrUextra 5608496 5608537 -23396119 - TART LINE telomeric -6226 8251 8211 7 627 606 198 44 25 chrUextra 5608524 5608722 -23395934 - TART LINE telomeric -4935 9542 9364 7 627 189 0 0 0 chrUextra 5608757 5608778 -23395878 + (T)n Simple_repeat Simple_repeat 1 21 0 7 627 4163 0 0 2 chrUextra 5608904 5609392 -23395264 + DM176_I LTR Gypsy 2422 2908 -3512 7 627 238 132 19 19 chrUextra 5609419 5609473 -23395183 + (TTA)n Simple_repeat Simple_repeat 1 54 0 7 627 21 89 0 0 chrUextra 5610623 5610679 -23393977 + AT_rich Low_complexity Low_complexity 1 56 0 7 627 5323 32 17 1 chrUextra 5610852 5611547 -23393109 - PROTOP DNA P -3774 706 1 7 627 701 100 322 25 chrUextra 5611566 5611724 -23392932 - DNAREP1_DM LINE Penelope 0 594 390 7 627 1953 105 11 28 chrUextra 5611826 5612200 -23392456 + BATUMI_I LTR Pao 7430 7963 0 7 627 1630 67 4 62 chrUextra 5612222 5612478 -23392178 + BATUMI_LTR LTR Pao 32 272 0 7 627 1861 22 5 0 chrUextra 5612478 5612700 -23391956 + DMCR1A LINE CR1 4203 4425 -45 7 627 790 132 0 0 chrUextra 5612800 5612921 -23391735 + DM176_I LTR Gypsy 6300 6420 0 7 627 2139 63 31 19 chrUextra 5613057 5613447 -23391209 + R1_DM LINE R1 611 1294 -4062 7 627 2004 31 0 0 chrUextra 5613445 5613674 -23390982 + R1_DM LINE R1 1607 1835 -3521 7 627 3682 189 29 11 chrUextra 5613780 5614647 -23390009 - SAR_DM Satellite Satellite -396 1076 195 7 627 7899 5 10 0 chrUextra 5614748 5615620 -23389036 + Invader2_I LTR Gypsy 603 1483 -3109 7 627 7262 38 16 1 chrUextra 5615722 5616596 -23388060 - R1_DM LINE R1 -3554 1802 916 7 627 2435 165 45 45 chrUextra 5616698 5618544 -23386112 + DMSAT6 Satellite Satellite 1 1846 -57 7 627 1816 213 82 14 chrUextra 5618681 5619185 -23385471 - Gypsy3_I LTR Gypsy -5052 1960 1176 7 627 326 296 84 103 chrUextra 5619199 5619511 -23385145 - Gypsy6_I LTR Gypsy -4867 1268 987 7 627 2549 84 33 24 chrUextra 5619619 5620490 -23384166 + DMSAT6 Satellite Satellite 1 878 -6 7 627 3002 29 8 0 chrUextra 5620592 5620943 -23383713 + ACCORD2_I LTR Gypsy 731 1084 -6128 7 627 3988 13 2 81 chrUextra 5620943 5621460 -23383196 - MICROPIA_LTR LTR Gypsy 0 476 1 7 627 3277 35 195 1 chrUextra 5621566 5622302 -23382354 - IDEFIX_I LTR Gypsy -4145 1483 606 7 627 884 72 0 16 chrUextra 5622313 5622440 -23382216 - IDEFIX_I LTR Gypsy -5142 486 362 7 627 384 107 0 0 chrUextra 5623173 5623229 -23381427 - DNAREP1_DM LINE Penelope -153 441 386 7 627 2522 107 23 7 chrUextra 5623543 5624388 -23380268 - DMSAT6 Satellite Satellite -5 858 1 7 627 276 59 0 0 chrUextra 5624489 5624523 -23380133 - Gypsy12_I LTR Gypsy -4150 1396 1363 7 627 4462 101 75 45 chrUextra 5624525 5625297 -23379359 - Gypsy12_I LTR Gypsy -4751 795 1 7 627 335 154 62 0 chrUextra 5625297 5625362 -23379294 - Gypsy12_LTR LTR Gypsy 0 2336 2268 7 627 3501 181 22 29 chrUextra 5625462 5626278 -23378378 + SAR_DM Satellite Satellite 267 1076 -396 7 627 244 143 0 0 chrUextra 5626293 5626335 -23378321 + SAR_DM Satellite Satellite 547 588 -884 7 627 1372 19 0 18 chrUextra 5626631 5626796 -23377860 - NTS_DM Other Other -78 162 1 7 627 1588 28 18 32 chrUextra 5626796 5627015 -23377641 - NTS_DM Other Other 0 240 25 7 627 268 196 0 19 chrUextra 5627085 5627137 -23377519 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 7 627 1039 53 0 15 chrUextra 5627175 5627308 -23377348 + G_DM LINE Jockey 2653 2783 -1563 7 627 180 0 0 0 chrUextra 5627913 5627933 -23376723 + (TG)n Simple_repeat Simple_repeat 1 20 0 7 627 3800 180 18 26 chrUextra 5628381 5629240 -23375416 - SAR_DM Satellite Satellite -268 1204 353 7 627 7526 22 1 1 chrUextra 5629354 5630227 -23374429 - R1_DM LINE R1 -1231 4125 3253 7 627 7405 39 0 1 chrUextra 5630327 5631200 -23373456 + IDEFIX_I LTR Gypsy 1199 2070 -3558 7 627 2668 82 23 21 chrUextra 5631300 5632171 -23372485 + DMSAT6 Satellite Satellite 1 873 0 7 627 1620 184 61 38 chrUextra 5632273 5632668 -23371988 - TART LINE telomeric -5052 9425 9022 7 627 1257 188 23 111 chrUextra 5632668 5633141 -23371515 - TAHRE LINE telomeric -3220 7243 6944 7 627 3021 184 96 14 chrUextra 5633271 5634119 -23370537 - SAR_DM Satellite Satellite -397 917 1 7 627 7338 17 7 3 chrUextra 5634219 5635092 -23369564 + Invader2_I LTR Gypsy 2800 3675 -917 7 627 26 64 0 0 chrUextra 5635555 5635602 -23369054 + AT_rich Low_complexity Low_complexity 1 47 0 7 627 33 25 0 0 chrUextra 5635623 5635663 -23368993 + AT_rich Low_complexity Low_complexity 1 40 0 7 628 1239 301 60 11 chrUextra 5636165 5636719 -23367937 - OSVALDO_I LTR Gypsy -3729 2924 2344 7 628 482 256 64 5 chrUextra 5636810 5637028 -23367628 - OSVALDO_I LTR Gypsy -4568 2085 1857 7 628 3897 5 0 64 chrUextra 5637138 5637610 -23367046 - MICROPIA_LTR LTR Gypsy -34 442 1 7 628 1260 120 79 56 chrUextra 5637610 5638011 -23366645 - TART LINE telomeric -4660 9817 9467 7 628 7318 35 6 2 chrUextra 5638111 5638984 -23365672 + MDG1_I LTR Gypsy 1601 2476 -4120 7 628 2489 4 4 0 chrUextra 5639084 5639356 -23365300 + DM412B_LTR LTR Gypsy 210 482 -89 7 628 3767 57 8 3 chrUextra 5639477 5639957 -23364699 + DMRT1B LINE R1 1 444 -4739 7 628 6341 9 41 14 chrUextra 5640057 5640831 -23363825 + PROTOP_A DNA P 311 1105 0 7 628 1404 163 0 0 chrUextra 5641030 5641324 -23363332 - TART_B1 LINE telomeric -8839 1815 1522 7 628 2727 97 25 56 chrUextra 5641345 5641791 -23362865 - TART LINE telomeric -8723 5754 5323 7 628 749 136 114 0 chrUextra 5641771 5641903 -23362753 - TART LINE telomeric -10594 3883 3737 7 628 1706 304 42 14 chrUextra 5642042 5642867 -23361789 - Copia_I LTR Copia -932 3661 2814 7 628 682 0 0 0 chrUextra 5642978 5643054 -23361602 + NOMAD_I LTR Gypsy 6497 6572 0 7 628 4800 0 0 0 chrUextra 5643054 5643572 -23361084 + NOMAD_LTR LTR Gypsy 1 518 0 7 628 551 0 131 4 chrUextra 5643572 5643809 -23360847 + (TA)n Simple_repeat Simple_repeat 1 267 0 7 628 40 0 0 0 chrUextra 5643809 5643849 -23360807 + AT_rich Low_complexity Low_complexity 1 40 0 7 628 7935 3 0 0 chrUextra 5643949 5644822 -23359834 - ROVER-I_DM LTR Gypsy -2853 3731 2859 7 628 3415 173 99 3 chrUextra 5644949 5645795 -23358861 + Gypsy12_I LTR Gypsy 2495 3421 -2125 7 628 7575 22 25 1 chrUextra 5645895 5646768 -23357888 - DMCR1A LINE CR1 -3084 1386 493 7 628 6466 27 11 64 chrUextra 5646868 5647741 -23356915 - BATUMI_I LTR Pao -6329 1634 808 7 628 3603 197 13 20 chrUextra 5647842 5648713 -23355943 + SAR_DM Satellite Satellite 1 864 -225 7 628 4990 99 20 12 chrUextra 5648813 5649560 -23355096 + S_DM DNA Tc1 984 1736 0 7 628 967 45 8 8 chrUextra 5649560 5649685 -23354971 + CIRCE LINE Composite 4493 4617 -1739 7 628 2601 171 9 32 chrUextra 5649789 5650344 -23354312 - SAR_DM Satellite Satellite -365 1107 566 7 628 2488 7 0 16 chrUextra 5650348 5650657 -23353999 - DOC LINE Jockey 0 4725 4422 7 628 3834 163 134 15 chrUextra 5650757 5651627 -23353029 + TART_B1 LINE telomeric 1756 2729 -7925 7 628 3500 212 28 10 chrUextra 5651729 5652601 -23352055 + SAR_DM Satellite Satellite 278 1164 -308 7 628 999 9 0 0 chrUextra 5652701 5652810 -23351846 - NTS_DM Other Other -131 109 1 7 628 1509 15 20 25 chrUextra 5652810 5653014 -23351642 - NTS_DM Other Other 0 240 38 7 628 936 9 0 27 chrUextra 5653014 5653126 -23351530 - NTS_DM Other Other -107 133 25 7 628 21 57 0 0 chrUextra 5653152 5653187 -23351469 + AT_rich Low_complexity Low_complexity 1 35 0 7 628 1350 18 0 6 chrUextra 5653187 5653352 -23351304 - NTS_DM Other Other -39 201 38 7 628 936 9 0 27 chrUextra 5653352 5653464 -23351192 - NTS_DM Other Other -107 133 25 7 628 403 36 0 18 chrUextra 5653516 5653573 -23351083 - NTS_DM Other Other -39 201 146 7 628 3843 182 16 22 chrUextra 5653673 5654539 -23350117 + SAR_DM Satellite Satellite 230 1090 -382 7 628 7307 35 1 7 chrUextra 5654645 5655517 -23349139 + MDG1_I LTR Gypsy 3393 4259 -2337 7 628 3455 3 3 0 chrUextra 5655617 5656000 -23348656 - NOMAD_LTR LTR Gypsy -134 384 1 7 628 265 91 0 0 chrUextra 5656249 5656282 -23348374 + Baggins1 LINE LOA 4727 4759 -694 7 628 780 103 241 0 chrUextra 5656287 5656432 -23348224 + FB4_DM DNA Tc1 3908 4087 -2 7 628 1003 45 0 17 chrUextra 5656605 5656959 -23347697 + RSP Satellite Satellite 1 348 0 7 628 954 94 4 17 chrUextra 5656989 5657461 -23347195 + RSP Satellite Satellite 1 466 0 7 628 4044 11 0 62 chrUextra 5657561 5658057 -23346599 + MICROPIA_LTR LTR Gypsy 12 476 0 7 628 3111 21 50 0 chrUextra 5658057 5658433 -23346223 - ACCORD2_I LTR Gypsy -6128 1084 690 7 628 4944 20 41 3 chrUextra 5658533 5659124 -23345532 + R1_DM LINE R1 3703 4315 -1041 7 628 1887 23 32 0 chrUextra 5659119 5659338 -23345318 + R1_DM LINE R1 5131 5356 0 7 628 272 29 0 0 chrUextra 5659371 5659405 -23345251 + R1_DM LINE R1 1 34 -5322 7 628 4362 2 0 0 chrUextra 5659505 5659976 -23344680 + ACCORD_LTR LTR Gypsy 88 558 0 7 628 2139 50 7 9 chrUextra 5659976 5660377 -23344279 - R1_DM LINE R1 -2227 3129 2697 7 628 3552 17 7 0 chrUextra 5660478 5660893 -23343763 + ACCORD2_I LTR Gypsy 3274 3691 -3521 7 628 4119 4 0 0 chrUextra 5660897 5661349 -23343307 + ACCORD2_I LTR Gypsy 4093 4544 -2668 7 628 3192 155 66 24 chrUextra 5661612 5662247 -23342409 - Stalker2_I LTR Gypsy -6499 903 242 7 628 2697 189 54 16 chrUextra 5662421 5663290 -23341366 - SAR_DM Satellite Satellite -672 902 1 7 628 4316 142 155 1 chrUextra 5663394 5664264 -23340392 - DM176_I LTR Gypsy -2312 4108 3105 7 628 224 185 31 0 chrUextra 5664553 5664618 -23340038 + (TAA)n Simple_repeat Simple_repeat 2 68 0 7 628 53 17 0 0 chrUextra 5664839 5664899 -23339757 + AT_rich Low_complexity Low_complexity 1 60 0 7 628 21 36 0 0 chrUextra 5665074 5665102 -23339554 + AT_rich Low_complexity Low_complexity 1 28 0 7 628 4068 178 85 18 chrUextra 5665337 5666209 -23338447 + TAHRE LINE telomeric 9510 10439 -24 7 628 1133 8 0 0 chrUextra 5666309 5666432 -23338224 - BATUMI_I LTR Pao -7840 123 1 7 628 2323 11 0 25 chrUextra 5666432 5666711 -23337945 - BATUMI_LTR LTR Pao 0 272 1 7 628 21 0 0 0 chrUextra 5666848 5666869 -23337787 + AT_rich Low_complexity Low_complexity 1 21 0 7 628 2758 7 0 0 chrUextra 5667281 5667585 -23337071 - TABOR_LTR LTR Gypsy -202 304 1 7 628 4097 14 35 9 chrUextra 5667583 5668153 -23336503 - TABOR_I LTR Gypsy 0 6336 5752 7 628 7597 15 8 1 chrUextra 5668253 5669125 -23335531 - G2_DM LINE Jockey -2134 968 91 7 628 1661 31 0 5 chrUextra 5669225 5669419 -23335237 + PROTOP DNA P 4288 4480 0 7 628 26 30 0 0 chrUextra 5669785 5669818 -23334838 + AT_rich Low_complexity Low_complexity 1 33 0 7 628 23 68 0 0 chrUextra 5669864 5669908 -23334748 + AT_rich Low_complexity Low_complexity 1 44 0 7 628 21 89 0 0 chrUextra 5669944 5670000 -23334656 + AT_rich Low_complexity Low_complexity 1 56 0 7 628 5264 82 15 1 chrUextra 5670197 5671066 -23333590 - Gypsy6_I LTR Gypsy -3742 3270 1962 7 628 706 102 0 27 chrUextra 5671179 5671290 -23333366 - Gypsy12_I LTR Gypsy -4980 566 459 7 628 1856 94 18 55 chrUextra 5671303 5671629 -23333027 - Gypsy12_I LTR Gypsy -5206 340 27 7 628 1754 193 22 28 chrUextra 5671599 5671999 -23332657 - Gypsy12_LTR LTR Gypsy -1938 398 1 7 628 327 24 0 0 chrUextra 5671998 5672039 -23332617 - Gypsy12_I LTR Gypsy 0 5546 5506 7 628 2522 191 18 5 chrUextra 5672146 5673013 -23331643 + SAR_DM Satellite Satellite 1 878 -751 7 628 974 76 6 17 chrUextra 5673129 5673985 -23330671 + RSP Satellite Satellite 1 846 0 7 628 1650 299 45 31 chrUextra 5674169 5674941 -23329715 - Gypsy4_I LTR Gypsy -1804 4484 3702 7 628 3839 176 16 22 chrUextra 5675060 5675928 -23328728 + SAR_DM Satellite Satellite 196 1058 -414 7 628 2634 172 9 10 chrUextra 5676032 5676901 -23327755 - SAR_DM Satellite Satellite -425 867 1 7 628 2358 111 50 32 chrUextra 5677001 5677873 -23326783 - DMSAT6 Satellite Satellite -94 887 1 7 628 3727 178 23 23 chrUextra 5677975 5678839 -23325817 - SAR_DM Satellite Satellite -262 1210 347 7 628 2343 21 32 0 chrUextra 5678945 5679227 -23325429 + R1_DM LINE R1 4776 5066 -290 7 628 988 35 0 0 chrUextra 5679224 5679338 -23325318 + R1_DM LINE R1 5243 5356 0 7 628 3323 61 34 5 chrUextra 5679371 5679816 -23324840 + R1_DM LINE R1 1 458 -4898 7 628 3860 186 12 8 chrUextra 5679939 5680789 -23323867 - SAR_DM Satellite Satellite -396 1076 224 7 628 7383 26 5 1 chrUextra 5680891 5681761 -23322895 + R1_DM LINE R1 4005 4877 -479 7 628 4255 24 110 0 chrUextra 5681861 5682397 -23322259 + R1_DM LINE R1 4472 5066 -290 7 628 961 44 0 0 chrUextra 5682394 5682508 -23322148 + R1_DM LINE R1 5243 5356 0 7 628 1388 89 5 0 chrUextra 5682541 5682732 -23321924 + R1_DM LINE R1 1 192 -5164 7 628 1805 140 4 4 chrUextra 5682842 5683166 -23321490 - BATUMI_I LTR Pao -3410 4504 4105 7 628 1541 22 33 0 chrUextra 5683159 5683341 -23321315 + Copia2_I LTR Copia 2104 2291 -1871 7 628 979 71 0 0 chrUextra 5683334 5683460 -23321196 + Copia2_LTR_DM LTR Copia 73 198 0 7 628 500 276 138 0 chrUextra 5683460 5683702 -23320954 - TOM_I LTR Gypsy -350 5762 5595 7 628 2421 4 0 0 chrUextra 5683807 5684076 -23320580 + QUASIMODO_LTR LTR Gypsy 390 658 0 7 628 5008 15 47 12 chrUextra 5684076 5684676 -23319980 + QUASIMODO_I LTR Gypsy 1 621 -5439 7 628 3628 199 17 18 chrUextra 5684777 5685643 -23319013 - SAR_DM Satellite Satellite -466 864 1 7 628 623 13 0 0 chrUextra 5685747 5685824 -23318832 + NTS_DM Other Other 57 133 -107 7 628 1304 18 0 6 chrUextra 5685824 5685989 -23318667 + NTS_DM Other Other 38 201 -39 7 628 907 9 0 27 chrUextra 5686041 5686153 -23318503 + NTS_DM Other Other 25 133 -107 7 628 1287 24 0 6 chrUextra 5686153 5686318 -23318338 + NTS_DM Other Other 38 201 -39 7 628 907 9 0 27 chrUextra 5686379 5686491 -23318165 + NTS_DM Other Other 25 133 -107 7 628 950 48 0 8 chrUextra 5686491 5686618 -23318038 + NTS_DM Other Other 38 163 -77 7 628 2038 183 21 8 chrUextra 5686718 5687586 -23317070 - SAR_DM Satellite Satellite -495 879 1 7 628 21 89 0 0 chrUextra 5688455 5688511 -23316145 + AT_rich Low_complexity Low_complexity 1 56 0 7 628 3469 209 8 20 chrUextra 5688674 5689531 -23315125 + SAR_DM Satellite Satellite 1 847 -216 7 628 7005 22 36 0 chrUextra 5689631 5690502 -23314154 + Invader2_I LTR Gypsy 1967 2868 -1724 7 628 7487 32 2 0 chrUextra 5690602 5691473 -23313183 + G5A_DM LINE Jockey 1694 2566 -275 7 628 1485 153 86 18 chrUextra 5691580 5691882 -23312774 - MDG1_LTR LTR Gypsy -30 412 87 7 628 1620 11 0 11 chrUextra 5691882 5692155 -23312501 + (TTA)n Simple_repeat Simple_repeat 1 269 0 7 628 364 89 8 95 chrUextra 5692164 5692279 -23312377 - MDG1_I LTR Gypsy 0 6596 6529 7 628 493 114 52 22 chrUextra 5692299 5692433 -23312223 - MDG1_I LTR Gypsy -64 6532 6395 7 628 2510 241 42 61 chrUextra 5692551 5693407 -23311249 + Gypsy12_LTR LTR Gypsy 105 944 -1392 7 628 3551 175 37 31 chrUextra 5693517 5694386 -23310270 + SAR_DM Satellite Satellite 340 1213 -259 7 628 6032 10 21 0 chrUextra 5694486 5694854 -23309802 - STALKER4_I LTR Gypsy -834 5696 5329 7 628 183 80 0 0 chrUextra 5694854 5694879 -23309777 + (TATG)n Simple_repeat Simple_repeat 4 28 0 7 628 6032 10 21 0 chrUextra 5694879 5695217 -23309439 - STALKER4_I LTR Gypsy -1202 5328 4976 7 628 977 72 14 0 chrUextra 5695216 5695354 -23309302 + DMSAT6 Satellite Satellite 318 457 -13 7 628 2024 18 0 0 chrUextra 5695457 5695686 -23308970 + MICROPIA_I LTR Gypsy 1951 2179 -2297 7 628 5727 9 0 0 chrUextra 5695692 5696328 -23308328 + MICROPIA_I LTR Gypsy 2306 2941 -1535 7 628 7533 5 23 1 chrUextra 5696428 5697299 -23307357 + DM176_I LTR Gypsy 3866 4755 -1665 7 628 3406 233 3 3 chrUextra 5697401 5698259 -23306397 - DM412 LTR Gypsy -518 6884 5502 7 628 3342 132 33 5 chrUextra 5698380 5698959 -23305697 - Stalker2_I LTR Gypsy -6566 836 242 7 628 294 43 87 0 chrUextra 5699169 5699215 -23305441 - Stalker2_I LTR Gypsy -7352 50 1 7 628 23 0 0 0 chrUextra 5699787 5699810 -23304846 + AT_rich Low_complexity Low_complexity 1 23 0 7 628 4762 123 52 1 chrUextra 5700312 5701183 -23303473 + BATUMI_I LTR Pao 3671 4656 -3258 7 628 47 0 0 0 chrUextra 5701489 5701536 -23303120 + AT_rich Low_complexity Low_complexity 1 47 0 7 628 30 69 0 0 chrUextra 5701586 5701644 -23303012 + AT_rich Low_complexity Low_complexity 1 58 0 7 628 2780 221 20 1 chrUextra 5702254 5703125 -23301531 - ROVER-I_DM LTR Gypsy -2959 3625 2535 7 628 3492 168 51 59 chrUextra 5703229 5704096 -23300560 - Gypsy12_LTR LTR Gypsy -4 2332 1473 7 628 3571 200 6 16 chrUextra 5704196 5705057 -23299599 + SAR_DM Satellite Satellite 267 1118 -354 7 628 314 213 0 21 chrUextra 5704971 5705067 -23299589 - XDMR_DM Unknown Unknown 0 360 267 7 628 6262 34 0 0 chrUextra 5705167 5705933 -23298723 - ROO_I LTR Pao -3034 5222 4457 7 628 910 42 0 8 chrUextra 5705919 5706038 -23298618 - ROO_I LTR Pao -4398 3858 3741 7 628 2568 3 0 0 chrUextra 5706138 5706421 -23298235 + BEL_LTR LTR Pao 79 361 0 7 628 5390 0 0 2 chrUextra 5706421 5707009 -23297647 + BEL_I LTR Pao 1 587 -4817 7 628 256 318 40 40 chrUextra 5707301 5707478 -23297178 - Gypsy6_I LTR Gypsy -2298 4714 4538 7 628 259 128 0 21 chrUextra 5708166 5708214 -23296442 - HMSBEAGLE_I LTR Gypsy -6308 221 175 7 628 259 128 0 21 chrUextra 5708440 5708488 -23296168 - HMSBEAGLE_I LTR Gypsy -6308 221 175 7 628 277 106 0 21 chrUextra 5708718 5708766 -23295890 - HMSBEAGLE_I LTR Gypsy -6308 221 175 7 628 372 49 65 16 chrUextra 5708788 5708850 -23295806 - HMSBEAGLE_I LTR Gypsy -6464 65 1 7 628 452 198 0 10 chrUextra 5708849 5708951 -23295705 - DMLTR5 LTR Gypsy 0 266 166 7 628 4663 2 0 4 chrUextra 5709051 5709573 -23295083 + QUASIMODO_LTR LTR Gypsy 139 658 0 7 628 2991 9 0 0 chrUextra 5709574 5709922 -23294734 - DM176_I LTR Gypsy -4458 1962 1615 7 628 3745 180 14 24 chrUextra 5710026 5710892 -23293764 - SAR_DM Satellite Satellite -382 1090 234 7 628 3471 214 19 13 chrUextra 5711967 5712832 -23291824 + SAR_DM Satellite Satellite 1 870 -203 7 628 2171 11 62 0 chrUextra 5712935 5713195 -23291461 - R1_DM LINE R1 -1645 3711 3436 7 628 2669 39 57 4 chrUextra 5713185 5713805 -23290851 - R1_DM LINE R1 -2076 3280 2590 7 628 7242 23 41 1 chrUextra 5713905 5714775 -23289881 - DMRT1A LINE R1 -647 4536 3632 7 628 3639 10 0 0 chrUextra 5714875 5715277 -23289379 + GTWIN_LTR LTR Gypsy 94 495 0 7 628 4103 4 13 0 chrUextra 5715277 5715745 -23288911 + Copia2_I LTR Copia 424 897 -3265 7 628 2323 171 29 0 chrUextra 5715845 5716265 -23288391 - G6_DM LINE Jockey -854 1188 757 7 628 637 91 162 0 chrUextra 5716356 5716455 -23288201 - HELENA_RT LINE Jockey -774 543 429 7 628 1540 117 45 0 chrUextra 5716468 5716715 -23287941 - HELENA_RT LINE Jockey -1001 316 59 7 628 427 141 81 0 chrUextra 5716815 5716914 -23287742 - Stalker2_I LTR Gypsy -7054 348 242 7 628 281 65 87 0 chrUextra 5717107 5717153 -23287503 - Stalker2_I LTR Gypsy -7352 50 1 7 628 1625 7 240 0 chrUextra 5717153 5717453 -23287203 - Stalker3_LTR LTR Gypsy 0 372 1 7 628 1906 26 4 4 chrUextra 5717453 5717681 -23286975 + R1_DM LINE R1 4830 5057 -299 7 628 7231 20 0 15 chrUextra 5717785 5718654 -23286002 - FW_DM LINE Jockey -985 3707 2852 7 628 22 35 0 0 chrUextra 5718809 5718838 -23285818 + AT_rich Low_complexity Low_complexity 1 29 0 7 628 181 77 0 71 chrUextra 5718870 5718912 -23285744 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 7 628 558 286 106 31 chrUextra 5719149 5719541 -23285115 - IDEFIX_I LTR Gypsy -2876 3087 2541 7 628 22 56 0 0 chrUextra 5719541 5719577 -23285079 + AT_rich Low_complexity Low_complexity 1 36 0 7 628 4342 31 107 40 chrUextra 5719740 5720595 -23284061 + DMCR1A LINE CR1 2234 3146 -1324 7 628 25 75 0 0 chrUextra 5720964 5721017 -23283639 + AT_rich Low_complexity Low_complexity 1 53 0 7 628 21 57 0 0 chrUextra 5721055 5721090 -23283566 + AT_rich Low_complexity Low_complexity 1 35 0 7 628 7853 3 6 0 chrUextra 5721665 5722524 -23282132 + Gypsy3_I LTR Gypsy 1384 2247 -3930 7 628 3818 187 22 17 chrUextra 5722640 5723505 -23281151 - SAR_DM Satellite Satellite -326 1146 278 7 628 729 184 13 26 chrUextra 5723633 5723789 -23280867 + HETRP_DM Satellite Satellite 1529 1682 -190 7 628 726 185 17 58 chrUextra 5723919 5724091 -23280565 + HETRP_DM Satellite Satellite 1518 1682 -190 7 628 708 201 13 25 chrUextra 5724242 5724400 -23280256 + HETRP_DM Satellite Satellite 1529 1684 -188 7 628 1874 212 88 48 chrUextra 5724575 5725156 -23279500 + Gypsy12_LTR LTR Gypsy 588 1191 -1145 7 628 2164 32 112 7 chrUextra 5725159 5725445 -23279211 - CIRCE LINE Composite -5969 387 72 7 628 6814 44 0 16 chrUextra 5725545 5726415 -23278241 + R1_DM LINE R1 217 1072 -4284 7 628 3929 179 26 24 chrUextra 5726515 5727385 -23277271 + SAR_DM Satellite Satellite 342 1213 -259 7 628 51 31 0 0 chrUextra 5727975 5728040 -23276616 + AT_rich Low_complexity Low_complexity 1 65 0 7 628 2497 183 6 5 chrUextra 5728455 5729325 -23275331 + SAR_DM Satellite Satellite 1 870 -558 7 628 4092 231 2 2 chrUextra 5729425 5730295 -23274361 + TABOR_I LTR Gypsy 3616 4485 -1851 7 628 192 125 0 0 chrUextra 5730506 5730538 -23274118 + (TC)n Simple_repeat Simple_repeat 1 32 0 7 628 7786 19 1 0 chrUextra 5731365 5732235 -23272421 - Gypsy12_I LTR Gypsy -2199 3347 2477 7 628 2263 122 33 36 chrUextra 5732335 5733181 -23271475 + DMSAT6 Satellite Satellite 1 843 -83 7 628 3289 189 33 27 chrUextra 5733305 5734124 -23270532 + SAR_DM Satellite Satellite 446 1269 -203 7 628 938 70 28 0 chrUextra 5734032 5734175 -23270481 - ARS406_DM Unknown Unknown -175 178 32 7 628 2651 7 0 0 chrUextra 5734275 5734565 -23270091 - MDG3_I LTR Gypsy -4696 290 1 7 628 2343 15 4 0 chrUextra 5734564 5734830 -23269826 - MDG3_LTR LTR Gypsy 0 267 1 7 628 2453 51 48 0 chrUextra 5734830 5735145 -23269511 + Copia_I LTR Copia 1344 1673 -2920 7 628 879 81 0 8 chrUextra 5735245 5735370 -23269286 + ARS406_DM Unknown Unknown 66 189 -164 7 628 3455 194 24 21 chrUextra 5735272 5736114 -23268542 - SAR_DM Satellite Satellite -208 1264 421 7 628 5223 17 25 13 chrUextra 5736214 5736822 -23267834 - ACCORD2_I LTR Gypsy -6078 1134 520 7 628 2211 19 11 4 chrUextra 5736821 5737083 -23267573 - ACCORD2_I LTR Gypsy -6814 398 135 7 628 429 120 0 160 chrUextra 5737183 5737296 -23267360 + Stalker3_LTR LTR Gypsy 287 399 -3 7 628 6461 37 3 1 chrUextra 5737296 5738052 -23266604 + DIVER_I LTR Pao 3292 4048 -1595 7 628 7222 24 58 1 chrUextra 5738152 5739021 -23265635 - R1_DM LINE R1 -1021 4335 3418 7 628 1235 274 130 67 chrUextra 5739124 5739925 -23264731 - MDG3_I LTR Gypsy -1244 3742 2892 7 628 3940 177 11 11 chrUextra 5740090 5740917 -23263739 - SAR_DM Satellite Satellite -466 1006 180 7 628 1066 81 0 0 chrUextra 5740811 5740959 -23263697 + ARS406_DM Unknown Unknown 1 148 -205 7 628 4675 8 0 0 chrUextra 5741059 5741572 -23263084 + ROO_I LTR Pao 1457 1969 -6287 7 628 3486 5 0 3 chrUextra 5741544 5741926 -23262730 - ROO_I LTR Pao -564 7692 7312 7 628 4128 167 13 23 chrUextra 5742032 5742897 -23261759 + SAR_DM Satellite Satellite 246 1101 -371 7 628 779 336 68 10 chrUextra 5742839 5743155 -23261501 - ARS406_DM Unknown Unknown -9 351 2 7 628 3978 191 7 9 chrUextra 5743014 5743866 -23260790 + SAR_DM Satellite Satellite 180 1029 -443 7 628 7159 30 3 14 chrUextra 5743966 5744835 -23259821 - BATUMI_I LTR Pao -5558 2405 1546 7 628 7520 25 0 0 chrUextra 5744935 5745804 -23258852 + NINJA_I LTR Pao 1588 2456 -3555 7 628 3730 181 20 25 chrUextra 5745906 5746773 -23257883 + SAR_DM Satellite Satellite 293 1154 -318 7 628 2902 33 0 0 chrUextra 5746873 5747209 -23257447 - PROTOP_A DNA P -769 336 1 7 628 3387 26 0 99 chrUextra 5747228 5747742 -23256914 + NINJA_I LTR Pao 1 463 -5548 7 628 1884 25 4 59 chrUextra 5748280 5748534 -23256122 - ALUII_DM Unknown Unknown 0 240 1 7 628 21 57 0 0 chrUextra 5748534 5748569 -23256087 + AT_rich Low_complexity Low_complexity 1 35 0 7 628 7667 14 51 0 chrUextra 5748811 5749680 -23254976 - Copia2_I LTR Copia -386 3776 2864 7 628 47 0 0 0 chrUextra 5749826 5749873 -23254783 + AT_rich Low_complexity Low_complexity 1 47 0 7 628 318 135 0 0 chrUextra 5750749 5750801 -23253855 + MAX_I LTR Pao 1109 1160 -6754 7 628 3628 118 73 77 chrUextra 5750801 5751618 -23253038 + MAX_I LTR Pao 938 1751 -6163 7 628 2716 105 16 13 chrUextra 5751718 5752587 -23252069 + DMSAT6 Satellite Satellite 1 871 -119 7 628 3829 189 24 15 chrUextra 5752688 5753556 -23251100 - SAR_DM Satellite Satellite -255 1217 342 7 628 7760 8 1 1 chrUextra 5753656 5754525 -23250131 - R1_DM LINE R1 -1180 4176 3308 7 628 1453 11 16 5 chrUextra 5754625 5754811 -23249845 + DM297_I LTR Gypsy 3834 4021 -2146 7 628 3735 14 0 0 chrUextra 5754790 5755234 -23249422 + DM297_I LTR Gypsy 5724 6167 0 7 628 2185 8 11 11 chrUextra 5755234 5755494 -23249162 + DM297_LTR LTR Gypsy 1 260 -154 7 628 5571 22 5 2 chrUextra 5755598 5756236 -23248420 + TC1_DM DNA Tc1 1027 1666 0 7 628 7360 30 0 0 chrUextra 5756563 5757432 -23247224 - HETA LINE telomeric -2594 3487 2619 7 628 2204 16 16 0 chrUextra 5757540 5757786 -23246870 + PROTOP_A DNA P 840 1089 -16 7 628 2818 79 24 3 chrUextra 5757793 5758401 -23246255 + TART_B1 LINE telomeric 2399 3119 -7535 7 628 2940 81 2 21 chrUextra 5758501 5758919 -23245737 - DOC3_DM LINE Jockey -1608 3132 2723 7 628 1241 50 0 0 chrUextra 5758997 5759157 -23245499 + DMCR1A LINE CR1 114 273 -4197 7 628 1192 75 0 6 chrUextra 5759168 5759328 -23245328 + DMCR1A LINE CR1 330 488 -3982 7 628 2242 180 49 36 chrUextra 5759469 5760021 -23244635 - Stalker2_I LTR Gypsy -6553 849 291 7 628 28 48 0 0 chrUextra 5760028 5760070 -23244586 + AT_rich Low_complexity Low_complexity 1 42 0 7 628 870 119 5 39 chrUextra 5760175 5760337 -23244319 - STALKER4_LTR LTR Gypsy -3 399 230 7 628 3542 190 43 22 chrUextra 5760445 5761305 -23243351 - SAR_DM Satellite Satellite -216 1256 379 7 628 3981 0 2 0 chrUextra 5761405 5761834 -23242822 + QUASIMODO_LTR LTR Gypsy 229 658 0 7 628 216 0 0 0 chrUextra 5761834 5761858 -23242798 + (TA)n Simple_repeat Simple_repeat 1 24 0 7 628 2168 20 16 0 chrUextra 5761860 5762113 -23242543 - DM176_LTR LTR Gypsy 0 507 251 7 628 1436 13 0 0 chrUextra 5762114 5762273 -23242383 - DM176_LTR LTR Gypsy -224 283 125 7 628 471 200 0 18 chrUextra 5762373 5762485 -23242171 + XDMR_DM Unknown Unknown 251 360 0 7 628 3698 189 11 19 chrUextra 5762399 5763241 -23241415 - SAR_DM Satellite Satellite -354 1118 284 7 628 2423 103 16 35 chrUextra 5763341 5764209 -23240447 - DMSAT6 Satellite Satellite -119 851 1 7 628 1699 267 51 52 chrUextra 5764312 5765153 -23239503 - SAR_DM Satellite Satellite -439 1033 194 7 628 3885 11 2 64 chrUextra 5766245 5766726 -23237930 + MICROPIA_LTR LTR Gypsy 26 476 0 7 628 3459 11 5 0 chrUextra 5766734 5767113 -23237543 + Invader1_LTR LTR Gypsy 1 381 -42 7 629 2314 202 29 6 chrUextra 5767213 5768081 -23236575 - SAR_DM Satellite Satellite -784 887 1 7 629 25 0 0 0 chrUextra 5768298 5768323 -23236333 + AT_rich Low_complexity Low_complexity 1 25 0 7 629 2227 159 228 22 chrUextra 5768338 5769049 -23235607 + STALKER4_I LTR Gypsy 228 1130 -5400 7 629 4066 181 14 9 chrUextra 5769155 5770016 -23234640 + SAR_DM Satellite Satellite 180 1044 -428 7 629 7513 6 0 28 chrUextra 5770117 5770982 -23233674 - Invader3_I LTR Gypsy -2636 2252 1412 7 629 3519 185 24 30 chrUextra 5771086 5771931 -23232725 + SAR_DM Satellite Satellite 425 1264 -208 7 629 848 62 0 0 chrUextra 5771834 5771946 -23232710 - ARS406_DM Unknown Unknown -164 189 78 7 629 1375 63 10 59 chrUextra 5772053 5772255 -23232401 + BLOOD_LTR LTR Gypsy 67 258 -141 7 629 3850 38 141 5 chrUextra 5772370 5772921 -23231735 + BLOOD_I LTR Gypsy 1 626 -5987 7 629 2156 63 0 0 chrUextra 5773021 5773292 -23231364 + BS2 LINE Jockey 2658 2928 -1793 7 629 1927 9 0 18 chrUextra 5773292 5773511 -23231145 + ACCORD2_LTR LTR Gypsy 1 215 0 7 629 2419 36 3 38 chrUextra 5773511 5773880 -23230776 + ACCORD2_I LTR Gypsy 1 417 -6795 7 629 4027 0 0 0 chrUextra 5774957 5775417 -23229239 + I_DM LINE I 4998 5457 -774 7 629 234 0 0 0 chrUextra 5775417 5775443 -23229213 + (TAA)n Simple_repeat Simple_repeat 3 28 0 7 629 1767 207 32 8 chrUextra 5775446 5775825 -23228831 + TAHRE LINE telomeric 603 990 -9473 7 629 2512 115 19 20 chrUextra 5775925 5776779 -23227877 - DMSAT6 Satellite Satellite -35 853 1 7 629 7409 32 1 0 chrUextra 5776893 5777761 -23226895 + R1_DM LINE R1 4302 5170 -186 7 629 7355 16 0 0 chrUextra 5777861 5778729 -23225927 + BEL_I LTR Pao 1999 2866 -2538 7 629 2972 6 0 0 chrUextra 5778829 5779175 -23225481 + NOMAD_LTR LTR Gypsy 173 518 0 7 629 3749 32 0 0 chrUextra 5779181 5779697 -23224959 - Stalker2_I LTR Gypsy -639 6258 5690 7 629 3500 184 17 19 chrUextra 5779798 5780665 -23223991 - SAR_DM Satellite Satellite -261 1211 346 7 629 484 87 32 11 chrUextra 5780775 5780868 -23223788 - ARS406_DM Unknown Unknown -164 189 95 7 629 3391 189 8 8 chrUextra 5780832 5781633 -23223023 + SAR_DM Satellite Satellite 205 1005 -467 7 629 2042 215 12 54 chrUextra 5781741 5782312 -23222344 - Gypsy12_LTR LTR Gypsy -1777 559 13 7 629 1946 81 0 14 chrUextra 5782324 5782601 -23222055 - Gypsy12_I LTR Gypsy 0 5546 5274 7 629 3113 3 0 0 chrUextra 5782701 5783068 -23221588 + FW_DM LINE Jockey 4326 4692 0 7 629 4173 24 0 0 chrUextra 5783065 5783564 -23221092 + R1_DM LINE R1 4287 4785 -571 7 629 2962 214 17 20 chrUextra 5783669 5784537 -23220119 + SAR_DM Satellite Satellite 1 865 -216 7 629 2623 0 7 0 chrUextra 5784637 5784945 -23219711 - FW_DM LINE Jockey -4380 312 3 7 629 2497 168 14 9 chrUextra 5784945 5785505 -23219151 - SAR_DM Satellite Satellite -516 956 394 7 629 7437 2 2 3 chrUextra 5785605 5786473 -23218183 + SSU-rRNA_Dme rRNA rRNA 989 1855 -140 7 629 2432 116 10 31 chrUextra 5786573 5787440 -23217216 + DMSAT6 Satellite Satellite 1 849 -97 7 629 4849 17 2 3 chrUextra 5787541 5788139 -23216517 + G2_DM LINE Jockey 2506 3102 0 7 629 617 92 0 20 chrUextra 5788306 5788406 -23216250 + ROVER-LTR_DM LTR Gypsy 177 274 -93 7 629 1969 107 59 57 chrUextra 5788669 5789057 -23215599 - Gypsy6_LTR LTR Gypsy -18 389 1 7 629 180 77 0 0 chrUextra 5789311 5789337 -23215319 + (TAAAAA)n Simple_repeat Simple_repeat 4 29 0 7 629 3353 183 21 24 chrUextra 5789477 5790344 -23214312 - SAR_DM Satellite Satellite -257 1215 352 7 629 3248 52 68 40 chrUextra 5790581 5791079 -23213577 - PROTOP DNA P -3968 512 1 7 629 520 130 62 14 chrUextra 5791128 5791271 -23213385 - TART LINE telomeric -3988 10489 10370 7 629 501 231 66 111 chrUextra 5791506 5791929 -23212727 + ROVER-I_DM LTR Gypsy 1 404 -6180 7 629 2331 45 60 0 chrUextra 5791931 5792263 -23212393 + LOOPER1_DM DNA PiggyBac 1 352 -1529 7 629 540 56 0 0 chrUextra 5792397 5792469 -23212187 + (TAAAG)n Simple_repeat Simple_repeat 4 75 0 7 629 2052 12 0 0 chrUextra 5792471 5792725 -23211931 + TART LINE telomeric 7786 8039 -6438 7 629 3468 66 2 3 chrUextra 5792722 5793246 -23211410 + TART_B1 LINE telomeric 952 1453 -9201 7 629 3489 175 13 19 chrUextra 5793346 5794213 -23210443 - SAR_DM Satellite Satellite -399 1073 212 7 629 1505 11 6 0 chrUextra 5794870 5795049 -23209607 + (CTTAT)n Simple_repeat Simple_repeat 1 180 0 7 629 725 93 0 8 chrUextra 5795049 5795178 -23209478 + (TTCTC)n Simple_repeat Simple_repeat 4 132 0 7 629 224 0 0 162 chrUextra 5795337 5795547 -23209109 + (CTATA)n Simple_repeat Simple_repeat 3 178 0 7 629 1210 103 0 97 chrUextra 5795552 5795800 -23208856 + DIVER_LTR LTR Pao 1 224 0 7 629 2578 37 9 0 chrUextra 5795821 5796147 -23208509 + DIVER_I LTR Pao 1 329 -5314 7 629 6493 24 22 1 chrUextra 5796247 5797090 -23207566 - PROTOP_A DNA P -244 861 1 7 629 6092 38 86 1 chrUextra 5797214 5798081 -23206575 + Baggins1 LINE LOA 3816 4756 -697 7 629 3694 172 13 21 chrUextra 5798181 5799043 -23205613 - SAR_DM Satellite Satellite -372 1100 246 7 629 245 133 0 0 chrUextra 5799003 5799048 -23205608 + ARS406_DM Unknown Unknown 1 45 -308 7 629 1874 146 82 26 chrUextra 5799197 5799577 -23205079 - TART LINE telomeric -10480 3997 3597 7 629 3218 39 50 0 chrUextra 5799569 5800011 -23204645 - TART LINE telomeric -11657 2820 2357 7 629 980 138 35 26 chrUextra 5800225 5800456 -23204200 + NTS_DM Other Other 8 240 0 7 629 965 149 20 5 chrUextra 5800595 5800797 -23203859 + NTS_DM Other Other 1 205 -35 7 629 259 146 21 0 chrUextra 5800828 5800876 -23203780 + NTS_DM Other Other 1 49 -191 7 629 24 0 0 0 chrUextra 5801133 5801157 -23203499 + AT_rich Low_complexity Low_complexity 1 24 0 7 629 2890 86 207 30 chrUextra 5801220 5801946 -23202710 - DM412 LTR Gypsy 0 6897 6180 8 629 270 198 82 47 chrUextra 5802052 5802222 -23202434 + (TCTTG)n Simple_repeat Simple_repeat 3 178 0 8 629 280 174 83 42 chrUextra 5802146 5802314 -23202342 + (TCTA)n Simple_repeat Simple_repeat 4 178 0 8 629 346 157 111 19 chrUextra 5802589 5802751 -23201905 + (TCTG)n Simple_repeat Simple_repeat 4 180 0 8 629 213 194 74 49 chrUextra 5802663 5802826 -23201830 + (TCTA)n Simple_repeat Simple_repeat 2 168 0 8 629 1394 281 41 41 chrUextra 5803987 5804838 -23199818 - SAR_DM Satellite Satellite -396 1076 226 8 629 270 276 29 0 chrUextra 5804745 5804850 -23199806 + XDMR_DM Unknown Unknown 8 115 -245 8 629 24 0 0 0 chrUextra 5805075 5805099 -23199557 + AT_rich Low_complexity Low_complexity 1 24 0 8 629 304 138 0 17 chrUextra 5805271 5805330 -23199326 - PROTOP DNA P -4422 58 1 7 629 3698 26 0 0 chrUextra 5805353 5805817 -23198839 + IDEFIX_I LTR Gypsy 1 464 -5164 8 629 2809 219 18 30 chrUextra 5805917 5806783 -23197873 + SAR_DM Satellite Satellite 1 855 -208 8 629 2453 91 29 35 chrUextra 5806884 5807741 -23196915 - DMSAT6 Satellite Satellite -82 851 1 8 629 1527 0 0 0 chrUextra 5808056 5808233 -23196423 - FW_DM LINE Jockey -4515 177 1 8 629 5519 11 1 0 chrUextra 5808818 5809472 -23195184 + G_DM LINE Jockey 562 1216 -3130 8 629 1779 19 0 0 chrUextra 5809471 5809685 -23194971 + G_DM LINE Jockey 1342 1555 -2791 8 629 3085 80 100 14 chrUextra 5809785 5810592 -23194064 + Gypsy12_I LTR Gypsy 4670 5546 0 8 629 318 96 19 0 chrUextra 5810591 5810643 -23194013 + Gypsy12_LTR LTR Gypsy 1 53 -2283 8 629 2231 229 36 38 chrUextra 5810752 5811576 -23193080 - SAR_DM Satellite Satellite -455 1017 195 8 629 891 82 0 0 chrUextra 5811483 5811617 -23193039 + ARS406_DM Unknown Unknown 1 134 -219 8 629 2778 38 152 5 chrUextra 5811719 5812324 -23192332 - R1_DM LINE R1 -4011 1345 652 8 629 1925 9 0 0 chrUextra 5812321 5812547 -23192109 + MICROPIA_LTR LTR Gypsy 7 232 -244 8 629 3089 234 10 15 chrUextra 5812686 5813553 -23191103 + Stalker2_I LTR Gypsy 5012 5874 -1528 8 629 556 114 0 11 chrUextra 5813653 5813742 -23190914 - NTS_DM Other Other -145 95 8 8 629 267 85 43 0 chrUextra 5813838 5813885 -23190771 - NTS_DM Other Other -191 49 1 8 629 954 114 0 6 chrUextra 5813915 5814082 -23190574 - NTS_DM Other Other -67 173 8 8 629 259 146 21 0 chrUextra 5814180 5814228 -23190428 - NTS_DM Other Other -191 49 1 8 629 1029 134 20 5 chrUextra 5814259 5814461 -23190195 - NTS_DM Other Other -35 205 1 8 629 4079 23 21 0 chrUextra 5814620 5815132 -23189524 + FW_DM LINE Jockey 4170 4692 0 8 629 2821 22 8 0 chrUextra 5815130 5815487 -23189169 - ROO_I LTR Pao -4051 4205 3846 8 629 1119 145 0 0 chrUextra 5815587 5816454 -23188202 + (TA)n Simple_repeat Simple_repeat 1 867 0 8 629 7038 29 0 0 chrUextra 5816554 5817420 -23187236 - R1_DM LINE R1 -2333 3023 2158 8 629 4793 31 28 0 chrUextra 5817521 5818167 -23186489 - Invader2_I LTR Gypsy -3927 665 2 8 629 1487 66 0 36 chrUextra 5818168 5818388 -23186268 - Invader2_LTR LTR Gypsy 0 266 55 8 629 893 98 4 17 chrUextra 5818508 5819019 -23185637 - RSP Satellite Satellite 0 504 1 8 629 782 105 0 17 chrUextra 5819058 5819352 -23185304 - RSP Satellite Satellite 0 289 1 8 629 2559 93 28 5 chrUextra 5819482 5819871 -23184785 - Gypsy2_I LTR Gypsy -338 5797 5400 8 629 3483 27 9 0 chrUextra 5819884 5820322 -23184334 - PROTOP_A DNA P 0 1105 664 8 629 438 212 0 9 chrUextra 5820422 5820536 -23184120 + XDMR_DM Unknown Unknown 248 360 0 8 629 3429 179 11 20 chrUextra 5820451 5821285 -23183371 - SAR_DM Satellite Satellite -353 1119 294 8 629 3892 165 3 4 chrUextra 5821393 5822105 -23182551 + ROVER-I_DM LTR Gypsy 4403 5113 -1471 8 629 1044 0 0 8 chrUextra 5822132 5822256 -23182400 - STALKER4_LTR LTR Gypsy 0 402 280 8 629 1877 176 12 8 chrUextra 5822356 5823218 -23181438 - SAR_DM Satellite Satellite -727 865 1 8 629 304 23 0 23 chrUextra 5823323 5823367 -23181289 + MDG1_I LTR Gypsy 5825 5867 -729 8 629 714 54 222 45 chrUextra 5823373 5823555 -23181101 + MDG1_I LTR Gypsy 6393 6596 0 8 629 372 88 0 0 chrUextra 5823561 5823618 -23181038 + (TAA)n Simple_repeat Simple_repeat 3 59 0 8 629 1872 91 74 3 chrUextra 5823620 5823918 -23180738 + MDG1_LTR LTR Gypsy 94 412 -30 8 629 1234 84 137 8 chrUextra 5823940 5824188 -23180468 + R1-2_DM LINE R1 689 968 -2248 8 629 3389 181 20 23 chrUextra 5824293 5825155 -23179501 - SAR_DM Satellite Satellite -313 1159 301 8 629 1457 291 38 8 chrUextra 5825261 5826115 -23178541 - Invader6_I LTR Gypsy -933 3166 1528 8 629 6259 48 2 13 chrUextra 5826234 5827087 -23177569 + BATUMI_I LTR Pao 2779 3622 -4341 8 629 863 147 0 0 chrUextra 5827189 5827339 -23177317 + HOBO DNA hAT 1487 1636 -1380 8 629 423 203 39 71 chrUextra 5827347 5827501 -23177155 + HOBO DNA hAT 1753 1901 -1115 8 629 1938 109 15 6 chrUextra 5827508 5827832 -23176824 + HOBO DNA hAT 2088 2414 -602 8 629 29 47 0 0 chrUextra 5827837 5827880 -23176776 + AT_rich Low_complexity Low_complexity 1 43 0 8 629 531 81 0 169 chrUextra 5827902 5828050 -23176606 + HOBO DNA hAT 2428 2550 -466 8 629 1515 28 0 0 chrUextra 5828765 5828945 -23175711 + (TTTTC)n Simple_repeat Simple_repeat 1 180 0 8 629 645 14 0 0 chrUextra 5828945 5829019 -23175637 + (TTCTC)n Simple_repeat Simple_repeat 2 75 0 8 629 7285 8 2 6 chrUextra 5829119 5829985 -23174671 + CIRCE LINE Composite 1531 2393 -3963 8 629 813 120 2 0 chrUextra 5830087 5830241 -23174415 - ARS406_DM Unknown Unknown -223 130 2 8 629 2957 184 10 24 chrUextra 5830227 5830951 -23173705 + SAR_DM Satellite Satellite 406 1119 -353 8 629 6716 37 38 1 chrUextra 5831051 5831917 -23172739 + R1_DM LINE R1 1121 2018 -3338 8 629 577 154 53 9 chrUextra 5832020 5832363 -23172293 + GA-rich Low_complexity Low_complexity 1 358 0 8 629 6859 34 0 7 chrUextra 5832983 5833849 -23170807 - R1_DM LINE R1 -1932 3424 2565 8 629 5823 25 47 30 chrUextra 5833949 5834497 -23170159 + DM176_I LTR Gypsy 26 551 -5869 8 629 254 50 25 0 chrUextra 5834497 5834537 -23170119 + (TAAA)n Simple_repeat Simple_repeat 3 43 0 8 629 5823 25 47 30 chrUextra 5834537 5834815 -23169841 + DM176_I LTR Gypsy 552 866 -5554 8 629 3518 185 8 12 chrUextra 5834915 5835753 -23168903 - SAR_DM Satellite Satellite -441 1031 197 8 629 625 127 0 17 chrUextra 5835661 5835781 -23168875 + ARS406_DM Unknown Unknown 1 118 -235 8 629 494 135 31 10 chrUextra 5835881 5835978 -23168678 - TIRANT_LTR LTR Gypsy -318 99 1 8 629 965 50 0 92 chrUextra 5836252 5836405 -23168251 - Baggins1 LINE LOA 0 5453 5315 8 629 1699 33 124 0 chrUextra 5836401 5836642 -23168014 - Baggins1 LINE LOA -456 4997 4727 8 629 2382 95 21 21 chrUextra 5836848 5837712 -23166944 + DMSAT6 Satellite Satellite 1 864 -71 8 629 7018 30 0 1 chrUextra 5837813 5838679 -23165977 + R1_DM LINE R1 3768 4632 -724 8 629 3313 192 14 19 chrUextra 5838793 5839644 -23165012 - SAR_DM Satellite Satellite -354 1118 272 8 629 6136 37 113 0 chrUextra 5839746 5840611 -23164045 - DMRT1B LINE R1 -962 4221 3259 8 629 3660 178 9 11 chrUextra 5840711 5841562 -23163094 - SAR_DM Satellite Satellite -443 1029 180 8 629 791 83 0 0 chrUextra 5841456 5841577 -23163079 + ARS406_DM Unknown Unknown 1 121 -232 8 629 3240 184 13 19 chrUextra 5841680 5842543 -23162113 + SAR_DM Satellite Satellite 1 858 -208 8 629 838 322 14 15 chrUextra 5842645 5843238 -23161418 + Gypsy5_I LTR Gypsy 3943 4534 -1975 8 629 2118 23 8 0 chrUextra 5843238 5843499 -23161157 + STALKER4_LTR LTR Gypsy 1 263 -139 8 629 3428 183 19 23 chrUextra 5843609 5844475 -23160181 - SAR_DM Satellite Satellite -264 1208 347 8 629 1208 76 0 3 chrUextra 5845136 5845441 -23159215 + (ATAAG)n Simple_repeat Simple_repeat 1 304 0 8 629 4472 4 0 0 chrUextra 5845541 5846066 -23158590 + G2_DM LINE Jockey 2577 3101 -1 8 629 21 95 0 0 chrUextra 5846263 5846326 -23158330 + AT_rich Low_complexity Low_complexity 1 63 0 8 629 559 0 0 14 chrUextra 5846338 5846407 -23158249 + LSU-rRNA_Dme rRNA rRNA 1 68 -3832 8 629 7309 6 1 0 chrUextra 5846507 5847373 -23157283 - DOC2_DM LINE Jockey -1243 3550 2684 8 629 3335 188 34 20 chrUextra 5847476 5848339 -23156317 + SAR_DM Satellite Satellite 1 874 -242 8 629 242 0 0 0 chrUextra 5848439 5848467 -23156189 - MICROPIA_I LTR Gypsy -4448 28 1 8 629 3930 2 0 61 chrUextra 5848467 5848974 -23155682 - MICROPIA_LTR LTR Gypsy 0 476 1 8 629 550 0 0 0 chrUextra 5848974 5849038 -23155618 + ACCORD2_I LTR Gypsy 1081 1144 -6068 8 629 228 86 0 0 chrUextra 5849038 5849073 -23155583 + (TAA)n Simple_repeat Simple_repeat 2 36 0 8 629 810 64 0 0 chrUextra 5849087 5849197 -23155459 + ACCORD2_I LTR Gypsy 1258 1367 -5845 8 629 2131 231 63 52 chrUextra 5849438 5850234 -23154422 - Gypsy12_LTR LTR Gypsy -962 1374 570 8 629 423 101 0 0 chrUextra 5850370 5850439 -23154217 - ARS406_DM Unknown Unknown -284 69 1 8 629 3122 192 40 18 chrUextra 5850377 5851235 -23153421 + SAR_DM Satellite Satellite 224 1100 -372 8 629 473 18 0 0 chrUextra 5851335 5851391 -23153265 - NTS_DM Other Other -147 93 38 8 629 870 9 0 27 chrUextra 5851391 5851503 -23153153 - NTS_DM Other Other -107 133 25 8 629 21 57 0 0 chrUextra 5851529 5851564 -23153092 + AT_rich Low_complexity Low_complexity 1 35 0 8 629 1252 18 0 6 chrUextra 5851564 5851729 -23152927 - NTS_DM Other Other -39 201 38 8 629 870 9 0 27 chrUextra 5851729 5851841 -23152815 - NTS_DM Other Other -107 133 25 8 629 255 125 0 0 chrUextra 5851916 5851956 -23152700 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 629 246 150 0 0 chrUextra 5851999 5852039 -23152617 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 629 246 150 0 0 chrUextra 5852091 5852131 -23152525 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 629 2782 192 46 15 chrUextra 5852300 5853165 -23151491 - SAR_DM Satellite Satellite -862 891 1 8 629 2473 83 36 39 chrUextra 5853265 5854127 -23150529 + DMSAT6 Satellite Satellite 1 859 -82 8 629 1290 118 135 34 chrUextra 5854233 5854560 -23150096 + MAX_I LTR Pao 194 567 -7347 8 629 1123 84 381 0 chrUextra 5854813 5855073 -23149583 + MAX_I LTR Pao 557 915 -6999 8 629 4543 4 0 0 chrUextra 5855195 5855744 -23148912 - ROVER-I_DM LTR Gypsy -728 5856 5308 8 629 2053 22 0 0 chrUextra 5855793 5856060 -23148596 - ROVER-I_DM LTR Gypsy -1253 5331 5065 8 629 5801 23 1 1 chrUextra 5856160 5856863 -23147793 + R1_DM LINE R1 4654 5356 0 8 629 920 70 8 0 chrUextra 5856896 5857025 -23147631 + R1_DM LINE R1 1 130 -5226 8 629 3980 0 0 0 chrUextra 5857125 5857607 -23147049 - DM297_I LTR Gypsy -480 5687 5206 8 629 3192 5 0 0 chrUextra 5857603 5857990 -23146666 - DM297_I LTR Gypsy -1174 4993 4607 8 629 3603 177 21 13 chrUextra 5858090 5858948 -23145708 - SAR_DM Satellite Satellite -416 1056 192 8 629 3453 65 0 0 chrUextra 5859056 5859516 -23145140 + BS3_DM LINE Jockey 585 1044 -746 8 629 1765 68 0 0 chrUextra 5859506 5859742 -23144914 + BS3_DM LINE Jockey 1311 1546 -244 8 629 1070 71 6 12 chrUextra 5859750 5859920 -23144736 + DM297_I LTR Gypsy 2179 2347 -3820 8 629 348 252 21 36 chrUextra 5860021 5860161 -23144495 - DNAREP1_DM LINE Penelope -306 288 151 8 629 191 88 0 29 chrUextra 5860298 5860333 -23144323 + (CTATA)n Simple_repeat Simple_repeat 2 35 0 8 629 28 29 0 0 chrUextra 5860716 5860751 -23143905 + AT_rich Low_complexity Low_complexity 1 35 0 8 629 2731 9 0 0 chrUextra 5862494 5862815 -23141841 + Copia2_I LTR Copia 152 472 -3690 8 629 5477 5 39 5 chrUextra 5862915 5863780 -23140876 - MICROPIA_I LTR Gypsy -703 3773 2879 8 629 4313 6 68 2 chrUextra 5864845 5865710 -23138946 + DMRT1A LINE R1 1173 2094 -3089 8 629 1173 27 0 0 chrUextra 5865810 5865956 -23138700 - FW_DM LINE Jockey -3052 1640 1495 8 629 1796 9 0 18 chrUextra 5865956 5866175 -23138481 + ACCORD2_LTR LTR Gypsy 1 215 0 8 629 3906 8 10 30 chrUextra 5866175 5866675 -23137981 + ACCORD2_I LTR Gypsy 1 490 -6722 8 629 282 29 0 0 chrUextra 5866908 5866943 -23137713 + (GA)n Simple_repeat Simple_repeat 2 36 0 8 629 502 217 8 8 chrUextra 5866943 5867064 -23137592 + HETRP_DM Satellite Satellite 1549 1669 -203 8 629 681 179 7 14 chrUextra 5867227 5867369 -23137287 + HETRP_DM Satellite Satellite 1529 1669 -203 8 629 246 32 0 0 chrUextra 5867498 5867529 -23137127 + (GA)n Simple_repeat Simple_repeat 2 32 0 8 629 427 211 9 18 chrUextra 5867529 5867640 -23137016 + HETRP_DM Satellite Satellite 1549 1658 -214 8 629 2623 19 0 3 chrUextra 5867740 5868059 -23136597 + QUASIMODO_LTR LTR Gypsy 341 658 0 8 629 4222 23 0 35 chrUextra 5868059 5868605 -23136051 + QUASIMODO_I LTR Gypsy 1 527 -5533 8 629 5101 34 9 0 chrUextra 5868705 5869351 -23135305 - R1_DM LINE R1 -2070 3286 2635 8 629 1764 39 9 0 chrUextra 5869339 5869570 -23135086 - R1_DM LINE R1 -3004 2352 2120 8 629 764 297 48 33 chrUextra 5869678 5870529 -23134127 + SAR_DM Satellite Satellite 1 863 -405 8 629 3607 168 20 24 chrUextra 5870636 5871499 -23133157 + SAR_DM Satellite Satellite 332 1190 -282 8 629 283 50 0 0 chrUextra 5871651 5871691 -23132965 - TLD2 Unknown Unknown 0 218 179 8 629 518 303 22 22 chrUextra 5871694 5872156 -23132500 - ROVER-I_DM LTR Gypsy -3825 3187 2894 8 629 413 333 14 22 chrUextra 5872686 5873078 -23131578 - BURDOCK_I LTR Gypsy -4579 1556 850 8 629 2476 86 34 42 chrUextra 5873530 5874395 -23130261 + DMSAT6 Satellite Satellite 1 857 -141 8 629 1809 59 21 32 chrUextra 5874495 5874775 -23129881 - Gypsy12_I LTR Gypsy -5269 277 1 8 629 302 137 0 0 chrUextra 5874775 5874826 -23129830 - Gypsy12A_LTR LTR Gypsy 0 2336 2286 8 629 328 211 34 34 chrUextra 5874855 5875002 -23129654 - Gypsy12A_LTR LTR Gypsy -553 1727 1581 8 629 998 161 29 10 chrUextra 5875077 5875284 -23129372 - Gypsy12_LTR LTR Gypsy -962 1374 1164 8 629 1598 273 31 26 chrUextra 5875460 5875549 -23129107 + SAR_DM Satellite Satellite 267 844 -628 8 629 2539 67 3 0 chrUextra 5875549 5875909 -23128747 - XDMR Unknown Unknown 0 361 1 8 629 2517 69 3 0 chrUextra 5875909 5876269 -23128387 - XDMR Unknown Unknown 0 361 1 8 629 1598 273 31 26 chrUextra 5876269 5876309 -23128347 + SAR_DM Satellite Satellite 845 1119 -353 8 629 324 42 0 0 chrUextra 5876277 5876325 -23128331 - XDMR Unknown Unknown -24 337 290 8 629 3093 205 12 27 chrUextra 5877394 5878252 -23126404 - SAR_DM Satellite Satellite -216 1256 412 8 629 3018 192 19 20 chrUextra 5878353 5879215 -23125441 - SAR_DM Satellite Satellite -981 860 1 8 629 676 284 94 46 chrUextra 5879456 5880124 -23124532 - ZAM_I LTR Gypsy -1831 5659 4960 8 629 3443 187 14 20 chrUextra 5880281 5881145 -23123511 + SAR_DM Satellite Satellite 352 1210 -262 8 629 3262 176 17 35 chrUextra 5882216 5883036 -23121620 - SAR_DM Satellite Satellite -300 1172 368 8 629 7124 24 0 1 chrUextra 5883173 5884037 -23120619 + R1_DM LINE R1 1588 2450 -2906 8 629 3528 23 0 10 chrUextra 5884137 5884618 -23120038 + Invader2_I LTR Gypsy 4117 4592 0 8 629 1734 70 25 55 chrUextra 5884618 5884892 -23119764 + Invader2_LTR LTR Gypsy 1 266 0 8 629 497 96 0 0 chrUextra 5884925 5884998 -23119658 + HMSBEAGLE_I LTR Gypsy 6219 6291 -238 8 629 332 61 0 20 chrUextra 5885101 5885151 -23119505 - TRANSIB2 DNA Transib -567 2277 2229 8 629 245 224 60 0 chrUextra 5885125 5885192 -23119464 - TRANSIB1 DNA Transib -758 2256 2186 8 629 2598 66 21 66 chrUextra 5885541 5885965 -23118691 - TRANSIB2 DNA Transib -624 2220 1816 8 629 6313 35 31 3 chrUextra 5886065 5886929 -23117727 - IDEFIX_I LTR Gypsy -703 4925 4038 8 629 183 100 0 0 chrUextra 5887040 5887070 -23117586 + (TAA)n Simple_repeat Simple_repeat 3 32 0 8 629 1842 98 74 3 chrUextra 5887072 5887370 -23117286 + MDG1_LTR LTR Gypsy 94 412 -30 8 629 1297 20 0 0 chrUextra 5887370 5887523 -23117133 + R1_DM LINE R1 5202 5354 -2 8 629 2373 69 6 6 chrUextra 5887558 5887893 -23116763 + R1_DM LINE R1 1 335 -5021 8 629 748 0 0 21 chrUextra 5887993 5888090 -23116566 + BATUMI_I LTR Pao 7869 7963 0 8 629 2194 45 0 34 chrUextra 5888090 5888383 -23116273 + BATUMI_I LTR Pao 7002 7284 -679 8 629 4097 179 8 9 chrUextra 5888957 5889810 -23114846 - SAR_DM Satellite Satellite -426 1046 195 8 629 725 96 0 0 chrUextra 5889717 5889821 -23114835 + ARS406_DM Unknown Unknown 1 104 -249 8 629 3984 185 10 9 chrUextra 5889921 5890785 -23113871 - SAR_DM Satellite Satellite -396 1076 212 8 629 3666 189 14 20 chrUextra 5890885 5891749 -23112907 + SAR_DM Satellite Satellite 1 859 -216 8 629 1336 85 48 0 chrUextra 5891849 5892037 -23112619 + DMRT1C LINE R1 2041 2237 -3206 8 629 447 32 143 0 chrUextra 5892037 5892100 -23112556 + DMRT1C LINE R1 2177 2248 -3195 8 629 803 81 0 9 chrUextra 5892104 5892216 -23112440 + DMRT1C LINE R1 3628 3738 -1705 8 629 3679 61 40 12 chrUextra 5892212 5892713 -23111943 + DMRT1C LINE R1 4002 4516 -927 8 629 260 20 19 58 chrUextra 5893778 5893830 -23110826 + NTS_DM Other Other 113 162 -78 8 629 992 256 81 31 chrUextra 5894186 5894641 -23110015 + G6_DM LINE Jockey 243 720 -1322 8 629 3335 169 108 31 chrUextra 5894741 5895604 -23109052 - TART LINE telomeric -4101 10376 9487 8 629 966 71 14 14 chrUextra 5895705 5895848 -23108808 - DMCR1A LINE CR1 -4326 144 2 8 629 32 26 0 0 chrUextra 5895850 5895889 -23108767 + AT_rich Low_complexity Low_complexity 1 39 0 8 629 738 0 112 0 chrUextra 5895889 5896140 -23108516 + (TTA)n Simple_repeat Simple_repeat 1 279 0 8 629 189 230 0 0 chrUextra 5896188 5896262 -23108394 + (TTAA)n Simple_repeat Simple_repeat 1 74 0 8 629 22 35 0 0 chrUextra 5896401 5896430 -23108226 + AT_rich Low_complexity Low_complexity 1 29 0 8 629 5652 61 67 17 chrUextra 5896669 5897533 -23107123 - STALKER4_I LTR Gypsy -4892 1638 732 8 78 7713 2 22 2 chrUextra 5897633 5898497 -23106159 + DM176_I LTR Gypsy 3502 4382 -2038 8 630 1620 4 0 0 chrUextra 5898599 5898871 -23105785 + (GAGAA)n Simple_repeat Simple_repeat 1 272 0 8 630 2369 122 20 12 chrUextra 5899567 5900419 -23104237 + DMSAT6 Satellite Satellite 1 859 -74 8 630 5808 11 0 16 chrUextra 5900543 5901213 -23103443 - PROTOP_A DNA P 0 1105 447 8 630 1371 30 6 6 chrUextra 5901221 5901388 -23103268 - PROTOP_A DNA P -778 327 161 8 630 2664 0 3 0 chrUextra 5901488 5901778 -23102878 + R1_DM LINE R1 5066 5356 0 8 630 3560 7 229 2 chrUextra 5901785 5902239 -23102417 + R1_DM LINE R1 4800 5356 0 8 630 1053 9 0 0 chrUextra 5902237 5902351 -23102305 + LSU-rRNA_Dme rRNA rRNA 2640 2753 -1147 8 630 931 88 7 0 chrUextra 5903414 5903551 -23101105 - ARS406_DM Unknown Unknown -215 138 1 8 630 3865 176 19 11 chrUextra 5903433 5904277 -23100379 + SAR_DM Satellite Satellite 167 1017 -455 8 630 7709 12 0 0 chrUextra 5904377 5905240 -23099416 - DMRT1B LINE R1 -160 5023 4161 8 630 3082 57 123 54 chrUextra 5905723 5906203 -23098453 - TRANSIB2 DNA Transib -624 2220 1708 8 630 521 59 129 0 chrUextra 5906311 5906396 -23098260 - MAX_I LTR Pao -6999 915 820 8 630 529 93 230 14 chrUextra 5906407 5906546 -23098110 - MAX_I LTR Pao -7189 725 557 8 630 4206 25 4 2 chrUextra 5906551 5907032 -23097624 + Gypsy_LTR LTR Gypsy 1 482 0 8 630 1236 7 0 0 chrUextra 5907030 5907166 -23097490 + Gypsy_I LTR Gypsy 1 136 -6371 8 630 1566 29 0 2 chrUextra 5907266 5908129 -23096527 + (TCTA)n Simple_repeat Simple_repeat 1 861 0 8 630 5188 10 3 2 chrUextra 5908229 5908808 -23095848 - FW_DM LINE Jockey -732 3960 3381 8 630 2403 0 0 4 chrUextra 5908832 5909092 -23095564 - STALKER4_LTR LTR Gypsy 0 402 144 8 630 826 30 0 0 chrUextra 5909192 5909292 -23095364 + IDEFIX_I LTR Gypsy 182 281 -5347 8 630 7227 75 44 11 chrUextra 5909292 5911015 -23093641 + IDEFIX_I LTR Gypsy 1605 3427 -2201 8 630 5998 101 25 12 chrUextra 5911118 5911981 -23092675 + Gypsy12_I LTR Gypsy 1577 2451 -3095 8 630 6809 40 28 1 chrUextra 5912085 5912944 -23091712 - R1_DM LINE R1 -4010 1346 465 8 630 3915 178 13 22 chrUextra 5913044 5913907 -23090749 - SAR_DM Satellite Satellite -315 1157 303 8 630 5501 8 2 0 chrUextra 5914007 5914611 -23090045 + IVK_DM LINE I 4798 5402 0 8 630 262 305 25 44 chrUextra 5914584 5914858 -23089798 + QUASIMODO_I LTR Gypsy 5662 5930 -130 8 630 2717 0 0 0 chrUextra 5914970 5915271 -23089385 + FW_DM LINE Jockey 4392 4692 0 8 630 459 262 97 16 chrUextra 5915450 5915636 -23089020 - QUASIMODO_I LTR Gypsy -4388 1672 1472 8 630 262 247 0 0 chrUextra 5915722 5915795 -23088861 - QUASIMODO_I LTR Gypsy -4694 1366 1294 8 630 7386 36 0 0 chrUextra 5915933 5916796 -23087860 - R1_DM LINE R1 -2571 2785 1923 8 630 2554 89 0 52 chrUextra 5916896 5917759 -23086897 - DMSAT6 Satellite Satellite -99 817 1 8 630 4089 174 13 11 chrUextra 5917865 5918717 -23085939 + SAR_DM Satellite Satellite 180 1033 -439 8 630 3413 195 35 13 chrUextra 5918822 5919660 -23084996 - SAR_DM Satellite Satellite -321 1151 296 8 630 1713 310 28 28 chrUextra 5919789 5920618 -23084038 + ROVER-I_DM LTR Gypsy 1054 1882 -4702 8 630 7488 23 1 0 chrUextra 5920748 5921611 -23083045 - DMRT1B LINE R1 -2234 2949 2086 8 630 5919 65 56 6 chrUextra 5921715 5922572 -23082084 + TART LINE telomeric 2275 3174 -11303 8 630 7018 36 37 6 chrUextra 5922674 5923537 -23081119 + Baggins1 LINE LOA 903 1792 -3661 8 630 2430 114 7 33 chrUextra 5923641 5924500 -23080156 - DMSAT6 Satellite Satellite -196 836 1 8 630 2701 35 3 0 chrUextra 5925148 5925463 -23079193 - DIVER2_LTR LTR Pao 0 385 70 8 630 2470 185 19 8 chrUextra 5925563 5926426 -23078230 + SAR_DM Satellite Satellite 1 872 -203 8 630 714 134 34 0 chrUextra 5926526 5926645 -23078011 + DM176_I LTR Gypsy 6298 6420 0 8 630 611 188 45 57 chrUextra 5926869 5927079 -23077577 + DMTOM1_LTR LTR Gypsy 284 488 -19 8 630 426 100 14 28 chrUextra 5927070 5927142 -23077514 + DMTOM1_LTR LTR Gypsy 340 410 0 8 630 221 167 0 18 chrUextra 5927308 5927363 -23077293 + (TAA)n Simple_repeat Simple_repeat 1 54 0 8 630 2527 124 14 17 chrUextra 5927491 5928352 -23076304 - DMSAT6 Satellite Satellite -37 857 1 8 630 5650 39 136 48 chrUextra 5930392 5931238 -23073418 - BATUMI_I LTR Pao -4489 3474 2555 8 630 1224 107 68 186 chrUextra 5931338 5931661 -23072995 + Invader1_I LTR Gypsy 2902 3186 0 8 630 2602 109 44 19 chrUextra 5931662 5932074 -23072582 + Invader1_LTR LTR Gypsy 2 423 0 8 630 1499 131 2 35 chrUextra 5932302 5932582 -23072074 + Gypsy12_I LTR Gypsy 365 693 -4853 8 630 4078 83 116 13 chrUextra 5932566 5933162 -23071494 + Gypsy12_I LTR Gypsy 4395 5051 -495 8 630 1723 148 3 0 chrUextra 5934229 5934520 -23070136 - Gypsy5_I LTR Gypsy -1527 4982 4691 8 630 3469 147 14 0 chrUextra 5934531 5935081 -23069575 - Gypsy5_I LTR Gypsy -2234 4275 3718 8 630 664 38 0 0 chrUextra 5935186 5935265 -23069391 - DM176_I LTR Gypsy -6341 79 1 8 630 3705 19 47 91 chrUextra 5935265 5935795 -23068861 - DM176_LTR LTR Gypsy 0 507 1 8 630 618 208 59 71 chrUextra 5935810 5936048 -23068608 - QUASIMODO_LTR LTR Gypsy 0 658 424 8 630 6988 47 27 0 chrUextra 5936148 5937007 -23067649 - TART LINE telomeric -12214 2263 1382 8 630 993 6 0 119 chrUextra 5937112 5937513 -23067143 + (CACAA)n Simple_repeat Simple_repeat 1 353 0 8 630 4002 9 0 0 chrUextra 5937526 5937972 -23066684 + DMRT1B LINE R1 1328 1773 -3410 8 630 2878 3 0 0 chrUextra 5939996 5940317 -23064339 - QUASIMODO_LTR LTR Gypsy -335 323 3 8 630 225 53 102 51 chrUextra 5940317 5940376 -23064280 + (TATAG)n Simple_repeat Simple_repeat 2 63 0 8 630 206 203 94 6 chrUextra 5940514 5940673 -23063983 + (TA)n Simple_repeat Simple_repeat 2 174 0 8 630 343 178 72 18 chrUextra 5940686 5940852 -23063804 + (TA)n Simple_repeat Simple_repeat 2 176 0 8 630 22 35 0 0 chrUextra 5941155 5941184 -23063472 + AT_rich Low_complexity Low_complexity 1 29 0 8 630 7544 22 1 0 chrUextra 5941920 5942782 -23061874 + R1_DM LINE R1 4099 4961 -395 8 630 1596 37 0 0 chrUextra 5942882 5943070 -23061586 - BATUMI_I LTR Pao -3082 4881 4694 8 630 915 295 0 0 chrUextra 5943071 5943315 -23061341 - MAX_I LTR Pao -3275 4639 4396 8 630 3599 54 0 0 chrUextra 5943315 5943744 -23060912 - BATUMI_I LTR Pao -3885 4078 3650 8 630 1316 295 36 42 chrUextra 5943857 5944689 -23059967 + SAR_DM Satellite Satellite 294 1120 -352 8 630 439 165 11 11 chrUextra 5944613 5944705 -23059951 - XDMR_DM Unknown Unknown -10 350 259 8 630 4037 188 6 6 chrUextra 5944807 5945638 -23059018 + SAR_DM Satellite Satellite 246 1076 -396 8 630 237 175 15 31 chrUextra 5945603 5945668 -23058988 - XDMR_DM Unknown Unknown 0 360 297 8 630 1620 4 0 0 chrUextra 5946353 5946630 -23058026 + (CTTAT)n Simple_repeat Simple_repeat 1 277 0 8 630 3185 201 47 14 chrUextra 5947692 5948554 -23056102 - SAR_DM Satellite Satellite -494 890 1 8 630 1884 25 4 59 chrUextra 5948717 5948971 -23055685 - ALUII_DM Unknown Unknown 0 240 1 8 630 21 57 0 0 chrUextra 5948971 5949006 -23055650 + AT_rich Low_complexity Low_complexity 1 35 0 8 630 22 35 0 0 chrUextra 5949203 5949232 -23055424 + AT_rich Low_complexity Low_complexity 1 29 0 8 630 37 39 0 0 chrUextra 5949333 5949384 -23055272 + AT_rich Low_complexity Low_complexity 1 51 0 8 630 7488 24 0 0 chrUextra 5950578 5951439 -23053217 + HETA LINE telomeric 2283 3143 -2938 8 630 4896 19 55 0 chrUextra 5951539 5952400 -23052256 + DOC2_DM LINE Jockey 1034 1941 -2852 8 630 7381 19 14 0 chrUextra 5952500 5953361 -23051295 + ROO_I LTR Pao 761 1633 -6623 8 630 7563 11 0 2 chrUextra 5953461 5954322 -23050334 - STALKER4_I LTR Gypsy -4390 2140 1282 8 630 7398 24 30 0 chrUextra 5954423 5955283 -23049373 + R1_DM LINE R1 1501 2386 -2970 8 630 3950 189 7 15 chrUextra 5955384 5956244 -23048412 - SAR_DM Satellite Satellite -369 1103 251 8 630 2298 176 16 11 chrUextra 5957305 5957748 -23046908 - TAHRE LINE telomeric -40 10423 9979 8 630 2257 124 16 14 chrUextra 5957753 5958122 -23046534 - TAHRE LINE telomeric -19 10444 10075 8 630 3786 179 18 21 chrUextra 5958279 5959124 -23045532 + SAR_DM Satellite Satellite 369 1210 -262 8 630 665 50 0 0 chrUextra 5959227 5959307 -23045349 - R1_DM LINE R1 -3960 1396 1317 8 630 5786 46 1 63 chrUextra 5959305 5960087 -23044569 - R1_DM LINE R1 -3528 1828 1095 8 630 7243 22 19 3 chrUextra 5960188 5961049 -23043607 + R1_DM LINE R1 3801 4674 -682 8 630 7693 12 0 1 chrUextra 5961149 5962010 -23042646 + DMRT1A LINE R1 2582 3441 -1742 8 630 2709 205 51 52 chrUextra 5962168 5962971 -23041685 + TAHRE LINE telomeric 6944 7745 -2718 8 630 1548 12 0 0 chrUextra 5963071 5963240 -23041416 - Invader2_LTR LTR Gypsy -97 169 1 8 630 5769 10 0 10 chrUextra 5963240 5963932 -23040724 - Invader2_I LTR Gypsy 0 4592 3908 8 630 6725 38 1 15 chrUextra 5964032 5964888 -23039768 - R1_DM LINE R1 -4074 1282 439 8 630 3606 42 38 0 chrUextra 5964993 5965671 -23038985 + PROTOP_A DNA P 390 1153 0 8 630 328 85 0 0 chrUextra 5965671 5965718 -23038938 + PROTOP_A DNA P 420 466 -639 8 630 592 67 217 0 chrUextra 5965733 5965853 -23038803 + PROTOP_B DNA P 554 699 -454 8 630 3788 191 7 18 chrUextra 5965956 5966815 -23037841 - SAR_DM Satellite Satellite -361 1111 262 8 630 1689 42 51 5 chrUextra 5966915 5967129 -23037527 + Baggins1 LINE LOA 5230 5453 0 8 630 356 7 227 0 chrUextra 5967633 5967774 -23036882 + (ATATG)n Simple_repeat Simple_repeat 2 174 0 8 630 1473 17 0 0 chrUextra 5968010 5968182 -23036474 + (TAA)n Simple_repeat Simple_repeat 2 173 0 8 630 1792 5 0 0 chrUextra 5968182 5968380 -23036276 - Copia2_LTR_DM LTR Copia 0 198 1 8 630 3144 11 0 0 chrUextra 5968380 5968737 -23035919 - Copia2_I LTR Copia 0 4162 3806 8 630 359 315 24 24 chrUextra 5968952 5969118 -23035538 - BLASTOPIA_I LTR Gypsy -775 3706 3541 8 630 377 288 18 35 chrUextra 5969450 5969619 -23035037 - MDG3_I LTR Gypsy -1558 3428 3263 8 630 7341 27 19 0 chrUextra 5969798 5970659 -23033997 - R1_DM LINE R1 -1770 3586 2710 8 630 232 203 51 0 chrUextra 5970893 5970952 -23033704 - DMRT1C LINE R1 -1261 4182 4121 8 630 2391 89 115 11 chrUextra 5971109 5971482 -23033174 - MDG1_LTR LTR Gypsy -30 412 1 8 630 432 56 0 0 chrUextra 5971482 5971535 -23033121 + DOC5_DM LINE Jockey 3927 3979 -703 8 630 680 22 0 11 chrUextra 5971530 5971620 -23033036 + DOC5_DM LINE Jockey 4180 4268 -414 8 630 461 0 16 0 chrUextra 5971720 5971782 -23032874 + TART LINE telomeric 14415 14477 0 8 630 3108 24 0 8 chrUextra 5971781 5972161 -23032495 + TART LINE telomeric 14101 14477 0 8 630 3010 83 9 0 chrUextra 5972161 5972581 -23032075 + TART_B1 LINE telomeric 1171 1594 -9060 8 630 5225 94 73 38 chrUextra 5972681 5973541 -23031115 - Gypsy12_I LTR Gypsy -4374 1172 283 8 630 7495 24 9 0 chrUextra 5973644 5974503 -23030153 - STALKER4_I LTR Gypsy -1740 4790 3924 8 630 7168 26 55 1 chrUextra 5974603 5975464 -23029192 - R1_DM LINE R1 -2344 3012 2106 8 630 2387 123 15 17 chrUextra 5975564 5976424 -23028232 + DMSAT6 Satellite Satellite 1 858 -69 8 630 3656 191 18 26 chrUextra 5976525 5977376 -23027280 + SAR_DM Satellite Satellite 412 1255 -217 8 630 760 81 0 0 chrUextra 5977287 5977386 -23027270 - ARS406_DM Unknown Unknown -164 189 91 8 630 7449 8 28 0 chrUextra 5977486 5978347 -23026309 + Invader2_I LTR Gypsy 3236 4120 -472 8 630 2486 94 29 26 chrUextra 5978448 5979304 -23025352 - DMSAT6 Satellite Satellite -17 858 1 8 630 2685 88 30 8 chrUextra 5979408 5980269 -23024387 + DMSAT6 Satellite Satellite 1 880 -48 8 630 2608 92 31 14 chrUextra 5980369 5981229 -23023427 - DMSAT6 Satellite Satellite -84 875 1 8 630 4017 185 7 12 chrUextra 5981330 5982190 -23022466 + SAR_DM Satellite Satellite 212 1067 -405 8 630 4021 187 8 8 chrUextra 5982290 5983149 -23021507 - SAR_DM Satellite Satellite -396 1076 218 8 630 699 23 0 120 chrUextra 5983250 5983350 -23021306 + LSU-rRNA_Dme rRNA rRNA 2562 2649 -1251 8 630 2897 9 0 0 chrUextra 5983352 5983670 -23020986 + R1_DM LINE R1 5039 5356 0 8 630 3968 14 0 2 chrUextra 5983668 5984110 -23020546 + LSU-rRNA_Dme rRNA rRNA 2640 3080 -820 8 630 3825 191 21 16 chrUextra 5984210 5985068 -23019588 + SAR_DM Satellite Satellite 1 862 -242 8 630 265 61 0 0 chrUextra 5985170 5985203 -23019453 - LSU-rRNA_Dme rRNA rRNA -1228 2672 2640 8 630 3588 10 0 2 chrUextra 5985201 5985601 -23019055 - R1_DM LINE R1 0 5356 4958 8 630 3990 0 0 11 chrUextra 5985591 5986030 -23018626 - LSU-rRNA_Dme rRNA rRNA -1244 2656 2223 8 630 2907 0 3 6 chrUextra 5986130 5986452 -23018204 - HOBO DNA hAT -2695 321 1 8 630 25 31 0 0 chrUextra 5986684 5986716 -23017940 + AT_rich Low_complexity Low_complexity 1 32 0 8 630 750 189 30 0 chrUextra 5988050 5988214 -23016442 - SAR_DM Satellite Satellite -719 753 585 8 630 624 128 36 43 chrUextra 5988212 5988351 -23016305 - FB4_DM DNA Tc1 -1089 3000 2863 8 630 444 173 30 52 chrUextra 5988234 5988368 -23016288 + FB4_DM DNA Tc1 684 814 -3275 8 630 443 82 0 0 chrUextra 5988326 5988387 -23016269 - FB4_DM DNA Tc1 -4027 62 2 8 630 1293 153 77 2 chrUextra 5988423 5988847 -23015809 - SAR_DM Satellite Satellite -658 455 1 8 630 4951 75 3 31 chrUextra 5989010 5989803 -23014853 + STALKER4_I LTR Gypsy 5407 6129 -467 8 630 528 0 0 0 chrUextra 5989813 5989870 -23014786 + PROTOP_B DNA P 1 57 -1096 8 630 2364 0 0 19 chrUextra 5989970 5990235 -23014421 + HOBO DNA hAT 2757 3016 0 8 630 7916 6 0 0 chrUextra 5990930 5991790 -23012866 + Invader3_I LTR Gypsy 1203 2062 -2826 8 630 2352 128 9 47 chrUextra 5991890 5992750 -23011906 - DMSAT6 Satellite Satellite -32 827 1 8 630 3877 179 16 11 chrUextra 5992850 5993685 -23010971 - SAR_DM Satellite Satellite -454 1018 180 8 630 887 99 0 0 chrUextra 5993579 5993710 -23010946 + ARS406_DM Unknown Unknown 1 131 -222 8 630 27 29 0 0 chrUextra 5994100 5994134 -23010522 + AT_rich Low_complexity Low_complexity 1 34 0 8 630 670 93 41 0 chrUextra 5994373 5994470 -23010186 + Baggins1 LINE LOA 4727 4827 -626 8 630 813 105 229 0 chrUextra 5994463 5994616 -23010040 - FB4_DM DNA Tc1 -3899 190 3 8 630 3753 203 8 11 chrUextra 5994772 5995627 -23009029 + SAR_DM Satellite Satellite 195 1047 -425 8 630 6733 41 24 12 chrUextra 5995730 5996590 -23008066 - R1_DM LINE R1 -4064 1292 422 8 630 613 182 30 49 chrUextra 5996690 5996880 -23007776 - DMRT1B LINE R1 -4913 270 1 8 630 4998 23 0 0 chrUextra 5996978 5997550 -23007106 + R1_DM LINE R1 4592 5163 -193 8 630 3436 196 25 28 chrUextra 5997652 5998509 -23006147 - SAR_DM Satellite Satellite -219 1253 400 8 630 3652 11 0 2 chrUextra 5998610 5999054 -23005602 + DM176_I LTR Gypsy 5942 6384 -36 8 630 3259 20 12 35 chrUextra 5999066 5999470 -23005186 + DM176_LTR LTR Gypsy 89 483 -24 8 630 3991 2 0 0 chrUextra 5999570 6000000 -23004656 + LSU-rRNA_Dme rRNA rRNA 2001 2430 -1470 8 630 1126 5 197 0 chrUextra 6000000 6000183 -23004473 + LSU-rRNA_Dme rRNA rRNA 2431 2649 -1251 8 630 2224 12 0 0 chrUextra 6000185 6000430 -23004226 + R1_DM LINE R1 5039 5283 -73 8 630 21 0 0 0 chrUextra 6000731 6000752 -23003904 + AT_rich Low_complexity Low_complexity 1 21 0 8 630 3613 190 19 23 chrUextra 6001492 6002345 -23002311 + SAR_DM Satellite Satellite 369 1217 -255 8 630 2446 108 13 35 chrUextra 6002472 6003310 -23001346 - DMSAT6 Satellite Satellite -3 819 1 8 630 2780 201 40 70 chrUextra 6003411 6004225 -23000431 - TART_B1 LINE telomeric -9067 1587 798 8 630 3635 178 47 20 chrUextra 6004373 6005229 -22999427 - SAR_DM Satellite Satellite -242 1230 352 8 630 2284 309 42 13 chrUextra 6005330 6006190 -22998466 - MICROPIA_I LTR Gypsy -881 3595 2711 8 630 7530 30 0 0 chrUextra 6006290 6007150 -22997506 - STALKER4_I LTR Gypsy -1896 4634 3775 8 630 3390 201 15 17 chrUextra 6007250 6008110 -22996546 - SAR_DM Satellite Satellite -504 858 1 8 630 1281 342 15 20 chrUextra 6008457 6009069 -22995587 - MICROPIA_I LTR Gypsy -583 3893 3285 8 630 3873 38 4 2 chrUextra 6009171 6009876 -22994780 - R1_DM LINE R1 -2224 3132 2394 8 630 1336 20 7 0 chrUextra 6009878 6010030 -22994626 - R1_DM LINE R1 -3291 2065 1913 8 630 3427 3 0 0 chrUextra 6010130 6010497 -22994159 - MICROPIA_I LTR Gypsy -4109 367 1 8 630 4437 0 0 2 chrUextra 6010497 6010974 -22993682 - MICROPIA_LTR LTR Gypsy 0 476 1 8 630 4950 65 19 8 chrUextra 6011089 6011736 -22992920 + R1_DM LINE R1 1584 2237 -3119 8 630 674 42 219 0 chrUextra 6011817 6011913 -22992743 - Gypsy6A_LTR LTR Gypsy -233 187 71 8 630 3658 60 30 10 chrUextra 6012048 6012540 -22992116 - TART LINE telomeric -13745 732 231 8 630 589 311 28 16 chrUextra 6012609 6012864 -22991792 - Copia_I LTR Copia -3928 665 408 8 630 249 48 47 23 chrUextra 6012864 6012907 -22991749 - BATUMI_LTR LTR Pao 0 272 229 8 630 732 0 0 12 chrUextra 6013007 6013092 -22991564 - MDG1_LTR LTR Gypsy -272 170 87 8 630 423 100 0 0 chrUextra 6013092 6013162 -22991494 + (TTA)n Simple_repeat Simple_repeat 3 72 0 8 630 2404 137 28 29 chrUextra 6013966 6014825 -22989831 + DMSAT6 Satellite Satellite 1 858 -18 8 630 5431 0 0 0 chrUextra 6014925 6015518 -22989138 + FW_DM LINE Jockey 4100 4692 0 8 630 1432 118 34 11 chrUextra 6015519 6015784 -22988872 - DMSAT6 Satellite Satellite -116 354 84 8 630 363 0 0 0 chrUextra 6015884 6015925 -22988731 - PROTOP_B DNA P -1112 41 1 8 630 4936 34 83 2 chrUextra 6015925 6016743 -22987913 + Copia2_I LTR Copia 940 1824 -2338 8 630 4308 20 2 25 chrUextra 6016843 6017366 -22987290 - ROO_I LTR Pao -7745 511 1 8 630 2830 27 60 0 chrUextra 6017366 6017702 -22986954 - ROO_LTR LTR Pao 0 428 73 8 630 271 354 32 36 chrUextra 6017884 6018136 -22986520 + ZAM_I LTR Gypsy 2496 2746 -4744 8 630 1281 68 8 4 chrUextra 6019091 6019344 -22985312 + (TATTG)n Simple_repeat Simple_repeat 1 254 0 8 630 3750 176 21 25 chrUextra 6019722 6020579 -22984077 - SAR_DM Satellite Satellite -318 1154 301 8 630 2216 39 18 18 chrUextra 6020679 6020965 -22983691 + NINJA_I LTR Pao 2562 2847 -3164 8 630 5074 25 22 0 chrUextra 6020942 6021538 -22983118 + NINJA_I LTR Pao 3999 4607 -1404 8 630 8028 2 0 0 chrUextra 6021638 6022497 -22982159 + TART_B1 LINE telomeric 137 995 -9659 8 630 7614 14 11 0 chrUextra 6022597 6023456 -22981200 - DOC2_DM LINE Jockey -998 3795 2928 8 630 29 60 0 0 chrUextra 6024071 6024121 -22980535 + AT_rich Low_complexity Low_complexity 1 50 0 8 630 509 112 112 0 chrUextra 6024237 6024326 -22980330 + DNAREP1_DM LINE Penelope 496 594 0 8 630 21 57 0 0 chrUextra 6024380 6024415 -22980241 + AT_rich Low_complexity Low_complexity 1 35 0 8 630 2099 182 9 8 chrUextra 6024515 6025370 -22979286 + SAR_DM Satellite Satellite 1 855 -558 8 630 2464 112 6 33 chrUextra 6025474 6026333 -22978323 + DMSAT6 Satellite Satellite 1 835 -159 8 630 4996 19 15 89 chrUextra 6026433 6027119 -22977537 + LSU-rRNA_Dme rRNA rRNA 1633 2267 -1633 8 630 975 53 17 0 chrUextra 6027117 6027292 -22977364 + R2_DM LINE R2 805 1084 -2523 8 630 7896 5 0 0 chrUextra 6027392 6028251 -22976405 - MICROPIA_I LTR Gypsy -152 4324 3466 8 630 1824 115 75 48 chrUextra 6028361 6028798 -22975858 + BATUMI_I LTR Pao 321 769 -7194 8 630 1593 139 16 67 chrUextra 6028839 6029210 -22975446 + BATUMI_I LTR Pao 749 1100 -6863 8 78 7397 6 0 19 chrUextra 6029310 6030169 -22974487 + IDEFIX_I LTR Gypsy 550 1392 -4236 8 631 4150 19 2 4 chrUextra 6030269 6030744 -22973912 - R1_DM LINE R1 -2945 2411 1938 8 631 1921 54 0 4 chrUextra 6030728 6030971 -22973685 - R1_DM LINE R1 -4741 615 374 8 631 1218 64 6 0 chrUextra 6030972 6031128 -22973528 - R1_DM LINE R1 -5101 255 99 8 631 2284 34 0 0 chrUextra 6031229 6031492 -22973164 + DIVER_I LTR Pao 5381 5643 0 8 631 1293 107 0 118 chrUextra 6031492 6031746 -22972910 + DIVER_LTR LTR Pao 1 224 0 8 631 3136 37 3 0 chrUextra 6032187 6032568 -22972088 - IDEFIX_I LTR Gypsy -3057 2571 2190 8 631 3542 46 11 4 chrUextra 6032585 6033046 -22971610 - IDEFIX_I LTR Gypsy -4764 864 401 8 631 3254 175 53 19 chrUextra 6033328 6034005 -22970651 + STALKER4_I LTR Gypsy 1044 1743 -4787 8 631 4121 2 0 19 chrUextra 6034105 6034570 -22970086 - FW_DM LINE Jockey -3771 921 466 8 631 948 53 0 0 chrUextra 6034850 6034964 -22969692 + IDEFIX_I LTR Gypsy 1 114 -5514 8 631 2247 34 3 51 chrUextra 6035064 6035378 -22969278 - Gypsy7_I LTR Gypsy -4685 299 1 8 631 1891 76 0 12 chrUextra 6035378 6035631 -22969025 - Gypsy7_LTR LTR Gypsy 0 251 2 8 631 940 28 0 0 chrUextra 6035631 6035737 -22968919 - Gypsy7_I LTR Gypsy 0 4984 4879 8 631 576 67 11 11 chrUextra 6035832 6035922 -22968734 - Gypsy7_I LTR Gypsy -109 4875 4786 8 631 3119 40 3 3 chrUextra 6036023 6036396 -22968260 - R1_DM LINE R1 -3883 1473 1101 8 631 3911 62 2 4 chrUextra 6036395 6036882 -22967774 - R1_DM LINE R1 -4739 617 132 8 631 7578 15 36 0 chrUextra 6036982 6037841 -22966815 + R1_DM LINE R1 1692 2581 -2775 8 631 1301 73 54 6 chrUextra 6037941 6038199 -22966457 - DM176_I LTR Gypsy -1802 4618 4473 8 631 5251 5 5 0 chrUextra 6038197 6038798 -22965858 - DM176_I LTR Gypsy -4063 2357 1754 8 631 621 315 92 45 chrUextra 6039375 6039757 -22964899 + Gypsy6_I LTR Gypsy 2943 3358 -3214 8 631 2433 116 3 0 chrUextra 6039860 6040213 -22964443 - DMRT1B LINE R1 -1696 3487 3134 8 631 572 273 67 0 chrUextra 6040244 6040409 -22964247 + Gypsy12_I LTR Gypsy 3154 3329 -2217 8 631 6784 38 6 0 chrUextra 6040818 6041677 -22962979 - IDEFIX_I LTR Gypsy -291 5337 4474 8 631 2807 94 163 5 chrUextra 6041794 6042243 -22962413 - TART LINE telomeric -6799 7678 7159 8 631 1959 119 10 3 chrUextra 6042241 6042537 -22962119 - TART LINE telomeric -7446 7031 6734 8 631 3653 184 9 20 chrUextra 6042745 6043586 -22961070 + SAR_DM Satellite Satellite 287 1118 -354 8 631 306 188 0 0 chrUextra 6043531 6043595 -22961061 - XDMR Unknown Unknown 0 361 298 8 631 3599 189 12 20 chrUextra 6043701 6044554 -22960102 - SAR_DM Satellite Satellite -514 845 1 8 631 3697 180 16 21 chrUextra 6044654 6045512 -22959144 + SAR_DM Satellite Satellite 293 1146 -326 8 631 849 78 0 0 chrUextra 6045617 6045733 -22958923 - Jockey2 LINE Jockey -1894 1534 1419 8 631 778 148 30 61 chrUextra 6046224 6046389 -22958267 - Gypsy5_LTR LTR Gypsy -194 236 77 8 631 603 76 0 0 chrUextra 6046393 6046472 -22958184 - Jockey2 LINE Jockey -3346 82 4 8 631 6817 14 7 56 chrUextra 6046572 6047431 -22957225 - LSU-rRNA_Dme rRNA rRNA -1979 1921 1105 8 631 3414 16 3 0 chrUextra 6048007 6048389 -22956267 - DMRT1A LINE R1 -102 5081 4699 8 631 2534 101 8 42 chrUextra 6048497 6049347 -22955309 - DMSAT6 Satellite Satellite -64 821 1 8 631 7549 23 9 0 chrUextra 6049447 6050305 -22954351 + R1_DM LINE R1 1806 2671 -2685 8 631 2494 98 40 33 chrUextra 6050405 6051263 -22953393 - DMSAT6 Satellite Satellite -82 864 1 8 631 2882 171 14 31 chrUextra 6051365 6052221 -22952435 - SAR_DM Satellite Satellite -715 841 1 8 631 392 114 124 11 chrUextra 6052351 6052440 -22952216 - DNAREP1_DM LINE Penelope -439 155 57 8 631 403 156 111 0 chrUextra 6052515 6052605 -22952051 - DNAREP1_DM LINE Penelope -439 155 56 8 631 291 116 0 0 chrUextra 6052735 6052778 -22951878 + HETRP_DM Satellite Satellite 1518 1560 -312 8 631 278 105 0 0 chrUextra 6052826 6052864 -22951792 + HETRP_DM Satellite Satellite 1668 1705 -167 8 631 392 114 124 11 chrUextra 6052982 6053071 -22951585 - DNAREP1_DM LINE Penelope -439 155 57 8 631 535 116 0 140 chrUextra 6054243 6054393 -22950263 - ROVER-I_DM LTR Gypsy -6279 305 177 8 631 967 224 60 11 chrUextra 6054409 6054693 -22949963 + QUASIMODO_I LTR Gypsy 4961 5258 -802 8 631 792 236 93 14 chrUextra 6054694 6055050 -22949606 + QUASIMODO_I LTR Gypsy 5480 5863 -197 8 631 7318 33 1 0 chrUextra 6055195 6056053 -22948603 - R1_DM LINE R1 -2162 3194 2336 8 631 7181 1 57 1 chrUextra 6056153 6057009 -22947647 - ROO_I LTR Pao -7128 1128 225 8 631 1813 9 50 0 chrUextra 6057111 6057330 -22947326 - Copia2_I LTR Copia -407 3755 3526 8 631 1442 6 0 0 chrUextra 6057680 6057850 -22946806 - Copia2_LTR_DM LTR Copia 0 198 29 8 631 1034 0 0 0 chrUextra 6057850 6057969 -22946687 - Invader1_LTR LTR Gypsy 0 423 305 8 631 23 68 0 0 chrUextra 6058188 6058232 -22946424 + AT_rich Low_complexity Low_complexity 1 44 0 8 631 1893 50 0 0 chrUextra 6058687 6058926 -22945730 - PROTOP DNA P 0 4480 4242 8 631 3773 30 0 0 chrUextra 6059027 6059495 -22945161 + G2_DM LINE Jockey 2625 3092 -10 8 631 2797 62 10 0 chrUextra 6059496 6059885 -22944771 - G2_DM LINE Jockey -574 2528 2136 8 631 3416 173 19 23 chrUextra 6059985 6060838 -22943818 + SAR_DM Satellite Satellite 333 1181 -291 8 631 2757 6 0 0 chrUextra 6062439 6062759 -22941897 - Copia2_I LTR Copia -2248 1914 1595 8 631 3325 189 16 25 chrUextra 6062859 6063717 -22940939 - SAR_DM Satellite Satellite -467 850 1 8 631 6651 34 3 9 chrUextra 6063817 6064675 -22939981 - BATUMI_I LTR Pao -5384 2579 1727 8 631 1642 114 30 0 chrUextra 6064779 6065043 -22939613 - HETA LINE telomeric -3249 2832 2561 8 631 757 241 10 0 chrUextra 6065040 6065239 -22939417 - HETA LINE telomeric -4691 1390 1190 8 631 1113 173 17 68 chrUextra 6065254 6065608 -22939048 - TAHRE LINE telomeric -10110 353 18 8 631 3823 163 13 13 chrUextra 6065733 6066572 -22938084 - SAR_DM Satellite Satellite -439 1033 195 8 631 654 107 9 0 chrUextra 6066479 6066591 -22938065 + ARS406_DM Unknown Unknown 1 113 -240 8 631 3018 199 21 21 chrUextra 6066691 6067517 -22937139 + SAR_DM Satellite Satellite 439 1264 -208 8 631 903 70 0 0 chrUextra 6067420 6067549 -22937107 - ARS406_DM Unknown Unknown -164 189 61 8 631 6492 11 0 37 chrUextra 6067649 6068507 -22936149 + MDG3_I LTR Gypsy 1367 2192 -2794 8 631 6637 21 1 0 chrUextra 6068607 6069415 -22935241 - R1_DM LINE R1 -2271 3085 2277 8 631 436 0 0 0 chrUextra 6069415 6069465 -22935191 + CIRCE LINE Composite 4931 4980 -1376 8 631 2733 0 0 0 chrUextra 6069565 6069890 -22934766 + FW_DM LINE Jockey 4367 4691 -1 8 631 1205 72 11 27 chrUextra 6069888 6070074 -22934582 - ROO_I LTR Pao -7960 296 114 8 631 2555 32 0 3 chrUextra 6070107 6070423 -22934233 - ROO_LTR LTR Pao 0 428 114 8 631 1167 8 0 0 chrUextra 6071068 6071200 -22933456 + (TAGA)n Simple_repeat Simple_repeat 1 132 0 8 631 1557 17 0 0 chrUextra 6071200 6071380 -22933276 + (TAGG)n Simple_repeat Simple_repeat 1 180 0 8 631 311 340 30 34 chrUextra 6071511 6072049 -22932607 + Invader2_I LTR Gypsy 2495 3029 -1859 8 631 2950 169 14 20 chrUextra 6072441 6073140 -22931516 - SAR_DM Satellite Satellite -587 885 191 8 631 512 199 62 0 chrUextra 6073151 6073297 -22931359 - SAR_DM Satellite Satellite -749 723 569 8 631 2605 93 28 15 chrUextra 6073402 6074253 -22930403 - DMSAT6 Satellite Satellite -82 862 1 8 631 2669 47 0 0 chrUextra 6074872 6075213 -22929443 + DIVER2_I LTR Pao 901 1241 -2906 8 631 3305 173 17 26 chrUextra 6075314 6076152 -22928504 + SAR_DM Satellite Satellite 352 1181 -291 8 631 6948 19 21 0 chrUextra 6076270 6077127 -22927529 + ACCORD2_I LTR Gypsy 81 955 -6257 8 631 21 36 0 0 chrUextra 6077391 6077419 -22927237 + AT_rich Low_complexity Low_complexity 1 28 0 8 631 2116 109 0 0 chrUextra 6077709 6078022 -22926634 - DMRT1B LINE R1 -2 5181 4869 8 631 3315 178 16 17 chrUextra 6078191 6079041 -22925615 - SAR_DM Satellite Satellite -535 848 1 8 631 1071 87 0 0 chrUextra 6079157 6079318 -22925338 - ARS406_DM Unknown Unknown -192 161 1 8 631 3143 180 37 13 chrUextra 6079222 6079998 -22924658 + SAR_DM Satellite Satellite 192 986 -486 8 631 7370 1 1 3 chrUextra 6080098 6080955 -22923701 + SSU-rRNA_Dme rRNA rRNA 485 1339 -656 8 631 1193 44 167 0 chrUextra 6081055 6081271 -22923385 - FW_DM LINE Jockey -867 3825 3574 8 631 5153 23 20 0 chrUextra 6081270 6081912 -22922744 - FW_DM LINE Jockey -1277 3415 2761 8 631 2686 160 18 7 chrUextra 6082022 6082594 -22922062 + SAR_DM Satellite Satellite 326 903 -569 8 631 657 53 53 0 chrUextra 6082509 6082604 -22922052 - ARS406_DM Unknown Unknown -164 189 90 8 631 1036 209 0 4 chrUextra 6082609 6082869 -22921787 + SAR_DM Satellite Satellite 496 754 -718 8 631 39 50 0 0 chrUextra 6083535 6083595 -22921061 + AT_rich Low_complexity Low_complexity 1 60 0 8 631 26 50 0 0 chrUextra 6083766 6083806 -22920850 + AT_rich Low_complexity Low_complexity 1 40 0 8 631 7087 15 15 0 chrUextra 6083926 6084783 -22919873 - DOC2_DM LINE Jockey -2289 2504 1635 8 631 7069 20 13 0 chrUextra 6084883 6085739 -22918917 + R1_DM LINE R1 1733 2599 -2757 8 631 2757 204 30 28 chrUextra 6086816 6087652 -22917004 + SAR_DM Satellite Satellite 373 1210 -262 8 631 6543 37 31 8 chrUextra 6087755 6088602 -22916054 + Baggins1 LINE LOA 2742 3607 -1846 8 631 3376 188 20 20 chrUextra 6088711 6089568 -22915088 - SAR_DM Satellite Satellite -317 1155 299 8 631 3190 56 25 14 chrUextra 6089668 6090517 -22914139 + PROTOP_A DNA P 383 1105 0 8 631 3463 187 8 19 chrUextra 6090625 6091482 -22913174 + SAR_DM Satellite Satellite 253 1100 -372 8 631 2456 0 3 0 chrUextra 6091582 6091864 -22912792 + LSU-rRNA_Dme rRNA rRNA 2404 2686 -1214 8 631 4860 0 2 2 chrUextra 6091861 6092439 -22912217 + R1_DM LINE R1 852 1429 -3927 8 631 7265 6 19 1 chrUextra 6092539 6093396 -22911260 - GTWIN_I LTR Gypsy -1467 4954 4083 8 631 3039 115 0 0 chrUextra 6093496 6093964 -22910692 - DMRT1B LINE R1 -1582 3601 3134 8 631 487 285 67 0 chrUextra 6093995 6094160 -22910496 + Gypsy12_I LTR Gypsy 3154 3329 -2217 8 631 787 39 0 0 chrUextra 6094453 6094557 -22910099 + G5_DM LINE Jockey 4753 4856 0 8 631 836 106 9 20 chrUextra 6094561 6095310 -22909346 - RSP Satellite Satellite -13 741 1 8 631 237 172 86 0 chrUextra 6095410 6095468 -22909188 - TART LINE telomeric -1332 13145 13083 8 631 2142 125 0 25 chrUextra 6095488 6095852 -22908804 - TART LINE telomeric -10448 4029 3682 8 631 2080 108 21 78 chrUextra 6095846 6096267 -22908389 - TART LINE telomeric -11115 3362 2966 8 631 603 75 53 0 chrUextra 6096367 6096461 -22908195 - Invader2_I LTR Gypsy -4492 100 2 8 631 753 74 243 0 chrUextra 6096477 6096691 -22907965 - Invader2_LTR LTR Gypsy 0 266 1 8 631 921 164 318 10 chrUextra 6096691 6096980 -22907676 - HMSBEAGLE_I LTR Gypsy -355 6174 5797 8 631 1498 95 30 0 chrUextra 6096991 6097223 -22907433 - HMSBEAGLE_I LTR Gypsy -901 5628 5390 8 631 7449 7 0 0 chrUextra 6097324 6098181 -22906475 - Gypsy6_I LTR Gypsy -1921 5091 4235 8 631 491 15 77 0 chrUextra 6098281 6098346 -22906310 + ARS406_DM Unknown Unknown 120 189 -164 8 631 3229 187 31 22 chrUextra 6098288 6099138 -22905518 - SAR_DM Satellite Satellite -242 1230 374 8 631 2643 7 0 0 chrUextra 6099238 6099544 -22905112 + DMRT1B LINE R1 4878 5183 0 8 631 2221 104 26 45 chrUextra 6099551 6100090 -22904566 + QUASIMODO_LTR LTR Gypsy 51 643 -15 8 631 1251 92 0 0 chrUextra 6100195 6100368 -22904288 - TART_B1 LINE telomeric -6067 4587 4415 8 631 5242 51 15 0 chrUextra 6100366 6101052 -22903604 - TART_B1 LINE telomeric -7026 3628 2933 8 631 3559 16 0 25 chrUextra 6101152 6101594 -22903062 + CIRCE LINE Composite 1443 1873 -4483 8 631 3010 24 5 13 chrUextra 6101624 6102009 -22902647 + CIRCE LINE Composite 2015 2396 -3960 8 631 1127 70 13 17 chrUextra 6102113 6102343 -22902313 + (AATAG)n Simple_repeat Simple_repeat 1 229 0 8 631 1217 102 9 5 chrUextra 6102371 6102795 -22901861 + (AATAG)n Simple_repeat Simple_repeat 1 426 0 8 631 978 65 6 19 chrUextra 6102808 6102966 -22901690 + (AATAG)n Simple_repeat Simple_repeat 2 157 0 8 631 3240 181 15 16 chrUextra 6103066 6103871 -22900785 - SAR_DM Satellite Satellite -489 983 180 8 631 1064 70 0 6 chrUextra 6103764 6103923 -22900733 + ARS406_DM Unknown Unknown 1 158 -195 8 631 3709 103 103 43 chrUextra 6104048 6104880 -22899776 + PROTOP_A DNA P 1 882 -223 8 631 2638 204 39 21 chrUextra 6104992 6105759 -22898897 + SAR_DM Satellite Satellite 378 1158 -314 8 631 346 86 17 0 chrUextra 6105776 6105834 -22898822 + SAR_DM Satellite Satellite 377 435 -1037 8 631 3605 189 9 12 chrUextra 6105937 6106790 -22897866 - SAR_DM Satellite Satellite -1092 850 1 8 631 3879 2 0 0 chrUextra 6106894 6107340 -22897316 + NOMAD_LTR LTR Gypsy 73 518 0 8 631 6158 45 38 9 chrUextra 6107853 6108707 -22895949 + R1_DM LINE R1 257 1134 -4222 8 631 313 68 0 0 chrUextra 6109764 6109808 -22894848 + ARS406_DM Unknown Unknown 146 189 -164 8 631 2870 197 7 25 chrUextra 6109771 6110497 -22894159 - SAR_DM Satellite Satellite -620 833 27 8 631 782 40 0 0 chrUextra 6110497 6110597 -22894059 + ARS406_DM Unknown Unknown 90 189 -164 8 631 2870 197 7 25 chrUextra 6110597 6110619 -22894037 - SAR_DM Satellite Satellite -620 26 1 8 631 3496 187 13 20 chrUextra 6111676 6112531 -22892125 - SAR_DM Satellite Satellite -532 849 1 8 631 3436 191 18 31 chrUextra 6112631 6113487 -22891169 - SAR_DM Satellite Satellite -518 844 1 8 631 2306 8 0 0 chrUextra 6113587 6113849 -22890807 + LSU-rRNA_Dme rRNA rRNA 2195 2456 -1444 8 631 5345 2 0 0 chrUextra 6113852 6114443 -22890213 + R2_DM LINE R2 603 1193 -2414 8 631 1620 5 0 0 chrUextra 6114543 6114964 -22889692 + (TTATA)n Simple_repeat Simple_repeat 1 421 0 8 631 2332 11 0 0 chrUextra 6114984 6115260 -22889396 + Copia_LTR LTR Copia 1 276 0 8 631 1131 29 0 0 chrUextra 6115260 6115399 -22889257 + Copia_I LTR Copia 1 139 -4454 8 631 2588 106 23 32 chrUextra 6115499 6116355 -22888301 - DMSAT6 Satellite Satellite -84 848 1 8 631 227 229 16 16 chrUextra 6116984 6117046 -22887610 + MAX_I LTR Pao 3570 3631 -4283 8 631 7043 39 1 1 chrUextra 6117411 6118267 -22886389 - R1_DM LINE R1 -3638 1718 863 8 631 279 125 234 0 chrUextra 6118373 6118757 -22885899 + (CTAAA)n Simple_repeat Simple_repeat 1 474 0 8 631 2340 4 4 0 chrUextra 6118762 6119037 -22885619 + Copia_LTR LTR Copia 1 276 0 8 631 239 0 0 0 chrUextra 6119037 6119071 -22885585 + Copia_LTR LTR Copia 243 276 0 8 631 1156 7 178 0 chrUextra 6119071 6119223 -22885433 + Copia_I LTR Copia 1 179 -4414 8 631 1597 86 0 0 chrUextra 6119323 6119533 -22885123 - Gypsy12_I LTR Gypsy -680 4866 4657 8 631 1089 43 107 0 chrUextra 6119531 6119671 -22884985 - PROTOP_B DNA P -998 155 1 8 631 2607 159 58 26 chrUextra 6121243 6122087 -22882569 - TART LINE telomeric -4887 9590 8495 8 631 24 32 0 0 chrUextra 6122809 6122840 -22881816 + AT_rich Low_complexity Low_complexity 1 31 0 8 631 262 279 0 0 chrUextra 6122846 6122914 -22881742 + Invader4_I LTR Gypsy 1235 1302 -1111 8 631 40 21 0 0 chrUextra 6123215 6123262 -22881394 + AT_rich Low_complexity Low_complexity 1 47 0 8 631 4317 76 136 8 chrUextra 6123275 6124003 -22880653 + ACCORD2_I LTR Gypsy 883 1703 -5509 8 631 2383 265 5 0 chrUextra 6124210 6124828 -22879828 + HMSBEAGLE_I LTR Gypsy 3177 3797 -2732 8 631 287 311 8 8 chrUextra 6124826 6124959 -22879697 + HMSBEAGLE_I LTR Gypsy 4010 4142 -2387 8 631 2814 189 32 10 chrUextra 6125059 6125648 -22879008 - TAHRE LINE telomeric -122 10341 9740 8 631 1912 31 50 12 chrUextra 6125656 6125915 -22878741 - HETA LINE telomeric -2379 3702 3434 8 631 2920 95 90 4 chrUextra 6126019 6126499 -22878157 + Gypsy12_I LTR Gypsy 5024 5544 -2 8 631 1562 192 30 38 chrUextra 6126502 6126871 -22877785 + Gypsy12_LTR LTR Gypsy 2 367 -1969 8 631 6213 99 8 1 chrUextra 6126971 6127827 -22876829 - R1_DM LINE R1 -3615 1741 880 8 631 1587 6 0 0 chrUextra 6127931 6128111 -22876545 + (TTATA)n Simple_repeat Simple_repeat 1 180 0 8 631 1757 54 4 28 chrUextra 6128139 6128386 -22876270 + BATUMI_LTR LTR Pao 32 272 0 8 631 3075 43 20 5 chrUextra 6128386 6128782 -22875874 + BATUMI_I LTR Pao 1 402 -7561 8 631 6592 37 0 8 chrUextra 6128882 6129737 -22874919 + IDEFIX_I LTR Gypsy 3189 4036 -1592 8 631 1599 4 0 0 chrUextra 6129837 6130066 -22874590 + (GAGAA)n Simple_repeat Simple_repeat 1 229 0 8 631 3490 195 17 20 chrUextra 6130792 6131647 -22873009 + SAR_DM Satellite Satellite 1 852 -203 8 631 7166 35 3 0 chrUextra 6131747 6132602 -22872054 + DMCR1A LINE CR1 3446 4303 -167 8 631 3826 0 0 0 chrUextra 6132702 6133146 -22871510 - ROO_I LTR Pao -202 8054 7611 8 631 3744 7 0 7 chrUextra 6133128 6133557 -22871099 - ROO_I LTR Pao -1030 7226 6801 8 631 3032 39 52 0 chrUextra 6133657 6134043 -22870613 - PROTOP DNA P -4074 406 1 8 631 2171 32 0 0 chrUextra 6134612 6134864 -22869792 + Baggins1 LINE LOA 5201 5452 -1 8 631 4357 105 3 7 chrUextra 6134861 6135467 -22869189 - NOMAD_I LTR Gypsy -2103 4469 3866 8 631 3618 40 69 2 chrUextra 6135629 6136109 -22868547 - PROTOP DNA P -3968 512 1 8 631 486 158 70 12 chrUextra 6136227 6136368 -22868288 - TART LINE telomeric -3986 10491 10371 8 631 3083 215 73 12 chrUextra 6136522 6137377 -22867279 - TAHRE LINE telomeric -4606 1475 375 8 631 5409 0 0 0 chrUextra 6137477 6138078 -22866578 - FW_DM LINE Jockey -1833 2859 2259 8 631 2331 23 0 0 chrUextra 6138066 6138332 -22866324 - Gypsy4_I LTR Gypsy -2600 3688 3423 8 631 3236 204 24 8 chrUextra 6138434 6139233 -22865423 - SAR_DM Satellite Satellite -411 1061 250 8 631 6466 45 48 2 chrUextra 6139387 6140241 -22864415 - MDG1_I LTR Gypsy -4550 2046 1154 8 631 3676 187 14 10 chrUextra 6141307 6142134 -22862522 - SAR_DM Satellite Satellite -396 1076 246 8 631 330 231 33 0 chrUextra 6142059 6142150 -22862506 + XDMR_DM Unknown Unknown 6 99 -261 8 631 6155 7 0 0 chrUextra 6142415 6143107 -22861549 + Copia2_I LTR Copia 152 843 -3319 8 631 485 83 14 0 chrUextra 6143207 6143279 -22861377 + QUASIMODO_I LTR Gypsy 5103 5175 -885 8 631 1745 34 0 0 chrUextra 6143288 6143525 -22861131 + QUASIMODO_I LTR Gypsy 5491 5727 -333 8 631 2545 106 15 37 chrUextra 6143619 6144062 -22860594 + QUASIMODO_LTR LTR Gypsy 63 633 -25 8 631 616 144 9 0 chrUextra 6144163 6144274 -22860382 + DNAREP1_DM LINE Penelope 64 175 -419 8 631 889 165 51 19 chrUextra 6144314 6144528 -22860128 + DNAREP1_DM LINE Penelope 117 332 -262 8 631 419 157 188 73 chrUextra 6144512 6144704 -22859952 - DNAREP1_DM LINE Penelope -380 214 1 8 631 49 43 0 0 chrUextra 6144795 6144865 -22859791 + AT_rich Low_complexity Low_complexity 1 70 0 8 631 46 0 0 0 chrUextra 6145270 6145316 -22859340 + AT_rich Low_complexity Low_complexity 1 46 0 8 631 4639 43 2 12 chrUextra 6145332 6145972 -22858684 + PROTOP DNA P 199 831 -3649 8 631 2571 247 16 36 chrUextra 6146080 6146927 -22857729 - Gypsy6_I LTR Gypsy -1694 5318 4033 8 631 815 92 0 0 chrUextra 6147027 6147147 -22857509 - ARS406_DM Unknown Unknown -233 120 1 8 631 3343 177 7 10 chrUextra 6147051 6147765 -22856891 + SAR_DM Satellite Satellite 192 903 -569 8 631 758 73 0 0 chrUextra 6147772 6147881 -22856775 - ARS406_DM Unknown Unknown -195 158 50 8 631 7155 21 2 8 chrUextra 6147982 6148837 -22855819 + FW_DM LINE Jockey 1586 2435 -2257 8 631 488 98 63 31 chrUextra 6149491 6149618 -22855038 + CT-rich Low_complexity Low_complexity 4 134 0 8 631 5688 2 3 0 chrUextra 6149892 6150537 -22854119 + DOC LINE Jockey 4079 4725 0 8 631 1662 30 0 10 chrUextra 6150542 6150746 -22853910 + CIRCE LINE Composite 3480 3681 -2675 8 631 1189 0 0 7 chrUextra 6150847 6150985 -22853671 - NOMAD_I LTR Gypsy -6435 137 1 8 631 4715 2 0 0 chrUextra 6150985 6151503 -22853153 - NOMAD_LTR LTR Gypsy 0 518 1 8 631 1537 0 0 32 chrUextra 6151802 6151991 -22852665 + DM1731_I LTR Copia 3794 3976 0 8 631 2838 33 0 0 chrUextra 6151991 6152327 -22852329 + DM1731_LTR LTR Copia 1 336 0 8 631 2782 27 0 0 chrUextra 6152328 6152657 -22851999 - TAHRE LINE telomeric -9597 866 538 8 631 2122 46 0 4 chrUextra 6154306 6154567 -22850089 - PROTOP DNA P 0 4480 4221 8 631 7513 1 0 1 chrUextra 6155622 6156477 -22848179 + ROVER-I_DM LTR Gypsy 3257 4110 -2474 8 631 1946 255 24 38 chrUextra 6156577 6156682 -22847974 + SAR_DM Satellite Satellite 251 902 -570 8 631 2197 123 8 0 chrUextra 6156682 6157040 -22847616 - XDMR Unknown Unknown 0 361 1 8 631 2229 125 3 3 chrUextra 6157040 6157401 -22847255 - XDMR Unknown Unknown 0 361 1 8 631 1946 255 24 38 chrUextra 6157401 6157429 -22847227 + SAR_DM Satellite Satellite 903 1090 -382 8 631 5286 34 0 0 chrUextra 6157531 6158152 -22846504 - MAX_I LTR Pao -5377 2537 1917 8 631 1620 0 0 0 chrUextra 6158155 6158368 -22846288 + (CACAA)n Simple_repeat Simple_repeat 1 213 0 8 631 4983 39 74 12 chrUextra 6158485 6159160 -22845496 - ROO_I LTR Pao -3347 4909 4193 8 631 1497 12 0 0 chrUextra 6159169 6159339 -22845317 + FW_DM LINE Jockey 1750 1919 -2773 8 631 7265 18 0 2 chrUextra 6159439 6160293 -22844363 + LSU-rRNA_Dme rRNA rRNA 364 1215 -2685 8 632 3240 195 38 15 chrUextra 6160393 6161247 -22843409 + SAR_DM Satellite Satellite 1 873 -203 8 632 2747 271 21 2 chrUextra 6161347 6162191 -22842465 - G6_DM LINE Jockey -784 1258 399 8 632 669 97 0 0 chrUextra 6162301 6162404 -22842252 - ARS406_DM Unknown Unknown -238 115 13 8 632 3810 178 16 10 chrUextra 6162323 6163155 -22841501 + SAR_DM Satellite Satellite 195 1031 -441 8 632 1405 37 0 0 chrUextra 6163255 6163442 -22841214 + FW_DM LINE Jockey 4506 4692 0 8 632 1109 52 0 0 chrUextra 6163446 6163580 -22841076 - R1_DM LINE R1 -3966 1390 1257 8 632 3890 73 4 27 chrUextra 6163557 6164108 -22840548 - R1_DM LINE R1 -4656 700 163 8 632 3086 31 23 3 chrUextra 6164209 6164593 -22840063 + PROTOP DNA P 940 1331 -3149 8 632 659 226 6 54 chrUextra 6164864 6165032 -22839624 - HETA LINE telomeric -1770 4311 4152 8 632 238 132 19 19 chrUextra 6165772 6165826 -22838830 + (TAA)n Simple_repeat Simple_repeat 1 54 0 8 632 21 57 0 0 chrUextra 6165896 6165931 -22838725 + AT_rich Low_complexity Low_complexity 1 35 0 8 632 24 0 0 0 chrUextra 6165986 6166010 -22838646 + AT_rich Low_complexity Low_complexity 1 24 0 8 632 1078 0 0 0 chrUextra 6166117 6166241 -22838415 + DM1731_I LTR Copia 3853 3976 0 8 632 2562 36 0 3 chrUextra 6166241 6166550 -22838106 + DM1731_LTR LTR Copia 29 336 0 8 632 6996 21 0 1 chrUextra 6167071 6167925 -22836731 + DMRT1B LINE R1 2599 3451 -1732 8 632 2785 204 28 13 chrUextra 6168026 6168875 -22835781 + SAR_DM Satellite Satellite 1 861 -255 8 632 2572 0 0 3 chrUextra 6168979 6169280 -22835376 + Copia_I LTR Copia 4294 4593 0 8 632 2286 4 0 0 chrUextra 6169280 6169556 -22835100 + Copia_LTR LTR Copia 1 276 0 8 632 1620 7 0 0 chrUextra 6169557 6169833 -22834823 + (TATAA)n Simple_repeat Simple_repeat 1 276 0 8 632 1604 26 0 0 chrUextra 6169933 6170123 -22834533 + PROTOP DNA P 4291 4480 0 8 632 21 57 0 0 chrUextra 6170573 6170608 -22834048 + AT_rich Low_complexity Low_complexity 1 35 0 8 632 2676 184 162 9 chrUextra 6170948 6171740 -22832916 - DM297_I LTR Gypsy -1354 4813 3893 8 632 408 0 134 0 chrUextra 6172582 6172694 -22831962 + (TC)n Simple_repeat Simple_repeat 2 128 0 8 632 373 207 36 29 chrUextra 6172795 6172932 -22831724 - Gypsy12A_LTR LTR Gypsy -1286 1050 826 8 632 1638 204 35 21 chrUextra 6172961 6173535 -22831121 - Gypsy12A_LTR LTR Gypsy -1786 550 1 8 632 240 309 10 0 chrUextra 6173552 6173649 -22831007 + Ulysses_I LTR Gypsy 5202 5299 -1082 8 632 6800 29 22 0 chrUextra 6173749 6174603 -22830053 + R1_DM LINE R1 2146 3018 -2338 8 632 336 24 0 0 chrUextra 6174713 6174754 -22829902 + (GA)n Simple_repeat Simple_repeat 2 42 0 8 632 476 209 8 17 chrUextra 6174754 6174871 -22829785 + HETRP_DM Satellite Satellite 1549 1664 -208 8 632 681 179 7 14 chrUextra 6175039 6175181 -22829475 + HETRP_DM Satellite Satellite 1529 1669 -203 8 632 24 53 0 0 chrUextra 6175188 6175226 -22829430 + AT_rich Low_complexity Low_complexity 1 38 0 8 632 625 200 7 14 chrUextra 6175314 6175456 -22829200 + HETRP_DM Satellite Satellite 1529 1669 -203 8 632 1484 22 0 6 chrUextra 6175660 6175841 -22828815 + (TCTTG)n Simple_repeat Simple_repeat 1 180 0 8 632 3302 186 17 19 chrUextra 6176611 6177444 -22827212 + SAR_DM Satellite Satellite 386 1216 -256 8 632 533 43 0 0 chrUextra 6177395 6177465 -22827191 - ARS406_DM Unknown Unknown -164 189 120 8 632 862 87 14 0 chrUextra 6177565 6177703 -22826953 - ARS406_DM Unknown Unknown -213 140 1 8 632 3552 177 7 10 chrUextra 6177607 6178419 -22826237 + SAR_DM Satellite Satellite 192 1001 -471 8 632 2323 0 0 3 chrUextra 6178519 6178809 -22825847 + DOC LINE Jockey 4437 4725 0 8 632 2634 167 6 4 chrUextra 6178826 6179373 -22825283 + SAR_DM Satellite Satellite 326 873 -599 8 632 2499 83 26 23 chrUextra 6179473 6180327 -22824329 - DMSAT6 Satellite Satellite -78 855 1 8 632 6991 1 2 2 chrUextra 6180427 6181281 -22823375 - ROVER-I_DM LTR Gypsy -1334 5250 4397 8 632 302 64 21 0 chrUextra 6182188 6182235 -22822421 - DIVER2_LTR LTR Pao -1 384 337 8 632 750 229 0 0 chrUextra 6182342 6182521 -22822135 + (TA)n Simple_repeat Simple_repeat 1 179 0 8 632 1092 133 0 0 chrUextra 6182501 6182681 -22821975 + (CATA)n Simple_repeat Simple_repeat 1 180 0 8 632 235 213 64 39 chrUextra 6182702 6182780 -22821876 - OSVALDO_LTR LTR Gypsy -1105 91 12 8 632 852 196 0 0 chrUextra 6182810 6182989 -22821667 + (CATA)n Simple_repeat Simple_repeat 2 180 0 8 632 1059 139 0 0 chrUextra 6182999 6183179 -22821477 + (TA)n Simple_repeat Simple_repeat 1 180 0 8 632 3016 29 10 0 chrUextra 6183289 6183704 -22820952 + MDG1_I LTR Gypsy 5863 6281 -315 8 632 719 66 0 24 chrUextra 6183719 6183844 -22820812 + MDG1_I LTR Gypsy 6475 6596 0 8 632 372 88 0 0 chrUextra 6183860 6183917 -22820739 + (TAA)n Simple_repeat Simple_repeat 3 59 0 8 632 1452 85 98 0 chrUextra 6183919 6184143 -22820513 + MDG1_LTR LTR Gypsy 94 339 -103 8 632 609 131 49 20 chrUextra 6184244 6184602 -22820054 + GA-rich Low_complexity Low_complexity 1 368 0 8 632 1174 187 154 25 chrUextra 6185246 6185641 -22819015 - Gypsy12_LTR LTR Gypsy -727 1609 1164 8 632 436 226 31 37 chrUextra 6185658 6185819 -22818837 - Gypsy12_LTR LTR Gypsy -1257 1079 920 8 632 2305 4 29 4 chrUextra 6186151 6186431 -22818225 - STALKER4_LTR LTR Gypsy -115 287 1 8 632 4312 9 2 11 chrUextra 6186431 6187005 -22817651 - STALKER4_I LTR Gypsy 0 6530 5962 8 632 3383 177 13 14 chrUextra 6187106 6187936 -22816720 - SAR_DM Satellite Satellite -452 1020 192 8 632 700 102 0 8 chrUextra 6187839 6187958 -22816698 + ARS406_DM Unknown Unknown 1 118 -235 8 632 1935 21 4 0 chrUextra 6188060 6188297 -22816359 + R1_DM LINE R1 5032 5269 -87 8 632 4792 44 16 0 chrUextra 6188297 6188911 -22815745 + R1_DM LINE R1 1257 1880 -3476 8 632 2414 89 30 15 chrUextra 6189018 6189864 -22814792 + DMSAT6 Satellite Satellite 1 858 -3 8 632 3957 17 36 11 chrUextra 6189964 6190817 -22813839 + MAX_I LTR Pao 582 1537 -6377 8 632 7063 9 2 1 chrUextra 6190917 6191770 -22812886 + Invader2_I LTR Gypsy 874 1727 -2865 8 632 2179 16 0 0 chrUextra 6191870 6192126 -22812530 + R1_DM LINE R1 5101 5356 0 8 632 3902 77 30 3 chrUextra 6192159 6192723 -22811933 + R1_DM LINE R1 1 579 -4777 8 632 1945 9 0 0 chrUextra 6192826 6193050 -22811606 - Gypsy4_I LTR Gypsy -415 5873 5650 8 632 5092 16 5 0 chrUextra 6193055 6193676 -22810980 - Gypsy4_I LTR Gypsy -890 5398 4775 8 632 3484 179 18 18 chrUextra 6193777 6194629 -22810027 - SAR_DM Satellite Satellite -365 1107 256 8 632 3583 172 13 8 chrUextra 6195682 6196508 -22808148 + SAR_DM Satellite Satellite 247 1076 -396 8 632 762 140 14 0 chrUextra 6196635 6196778 -22807878 + HETA LINE telomeric 3043 3187 -2894 8 632 723 170 86 21 chrUextra 6196901 6197142 -22807514 + TART LINE telomeric 9364 9608 -4869 8 632 1814 57 7 50 chrUextra 6197142 6197421 -22807235 + MDG3_LTR LTR Gypsy 1 267 0 8 632 470 14 58 0 chrUextra 6197419 6197488 -22807168 + MDG3_I LTR Gypsy 1 73 -4913 8 632 7153 16 0 2 chrUextra 6197588 6198441 -22806215 - BEL_I LTR Pao -373 5031 4181 8 632 3056 164 19 11 chrUextra 6198545 6199394 -22805262 + SAR_DM Satellite Satellite 1 856 -435 8 632 3446 179 13 21 chrUextra 6199494 6200341 -22804315 - SAR_DM Satellite Satellite -264 1208 369 8 632 6977 25 1 1 chrUextra 6200447 6201300 -22803356 - R1_DM LINE R1 -2790 2566 1714 8 632 5728 89 0 10 chrUextra 6201445 6202253 -22802403 + Gypsy12_I LTR Gypsy 4206 5005 -541 8 632 3315 182 35 15 chrUextra 6202353 6203206 -22801450 + SAR_DM Satellite Satellite 207 1076 -396 8 632 2073 134 74 40 chrUextra 6204261 6204760 -22799896 - TAHRE LINE telomeric -9942 521 6 8 632 2335 75 3 0 chrUextra 6204747 6205081 -22799575 - HETA LINE telomeric -2 6079 5745 8 632 1528 156 7 10 chrUextra 6205212 6205510 -22799146 - HETA LINE telomeric -2258 3823 3527 8 632 4527 0 0 0 chrUextra 6205512 6206030 -22798626 - NOMAD_LTR LTR Gypsy 0 518 1 8 632 237 0 0 0 chrUextra 6206030 6206061 -22798595 - NOMAD_I LTR Gypsy 0 6572 6542 8 632 3450 192 16 19 chrUextra 6206165 6207018 -22797638 + SAR_DM Satellite Satellite 1 850 -216 8 632 2107 106 18 47 chrUextra 6207118 6207971 -22796685 + DMSAT6 Satellite Satellite 1 827 -74 8 632 3839 16 93 4 chrUextra 6208073 6208579 -22796077 + PROTOP DNA P 3930 4480 0 8 632 1635 112 199 0 chrUextra 6208579 6208923 -22795733 - TART_B1 LINE telomeric -9022 1632 1220 8 632 1620 20 0 2 chrUextra 6209406 6209875 -22794781 + (TCTA)n Simple_repeat Simple_repeat 1 468 0 8 632 7129 1 2 0 chrUextra 6209975 6210827 -22793829 + Gypsy5_I LTR Gypsy 5430 6283 -226 8 632 3365 76 7 11 chrUextra 6210927 6211422 -22793234 + BATUMI_I LTR Pao 5994 6420 -1543 8 632 2723 57 8 18 chrUextra 6211382 6211777 -22792879 - BATUMI_I LTR Pao -962 7001 6611 8 632 4772 5 0 0 chrUextra 6211879 6212433 -22792223 - Gypsy4_I LTR Gypsy -419 5869 5316 8 632 2103 0 0 12 chrUextra 6212476 6212731 -22791925 - Gypsy4_I LTR Gypsy -961 5327 5076 8 632 278 230 0 0 chrUextra 6212832 6212906 -22791750 + SAR_DM Satellite Satellite 988 1061 -411 8 632 2935 175 28 14 chrUextra 6212950 6213673 -22790983 + SAR_DM Satellite Satellite 205 937 -535 8 632 47 0 0 0 chrUextra 6214322 6214369 -22790287 + AT_rich Low_complexity Low_complexity 1 47 0 8 632 364 40 0 20 chrUextra 6214735 6214786 -22789870 + T412LTR LTR LTR 112 161 -320 8 632 2961 17 3 6 chrUextra 6214784 6215147 -22789509 + DM412B_LTR LTR Gypsy 128 489 -82 8 632 1612 188 94 9 chrUextra 6215134 6215558 -22789098 - TART LINE telomeric -5068 9409 8950 8 632 21 0 0 0 chrUextra 6215728 6215749 -22788907 + AT_rich Low_complexity Low_complexity 1 21 0 8 632 37 23 0 0 chrUextra 6215840 6215884 -22788772 + AT_rich Low_complexity Low_complexity 1 44 0 8 632 21 0 0 0 chrUextra 6215905 6215926 -22788730 + AT_rich Low_complexity Low_complexity 1 21 0 8 632 645 214 6 54 chrUextra 6216326 6216494 -22788162 - HETA LINE telomeric -1770 4311 4152 8 632 2518 75 3 0 chrUextra 6216641 6216990 -22787666 + PROTOP DNA P 4131 4480 0 8 632 26 30 0 0 chrUextra 6217340 6217373 -22787283 + AT_rich Low_complexity Low_complexity 1 33 0 8 632 3522 189 13 6 chrUextra 6217593 6218430 -22786226 + SAR_DM Satellite Satellite 234 1076 -396 8 632 3981 211 6 5 chrUextra 6218556 6219395 -22785261 + Gypsy_I LTR Gypsy 452 1291 -5216 8 632 975 82 0 0 chrUextra 6219495 6219642 -22785014 - ARS406_DM Unknown Unknown -206 147 1 8 632 3280 179 15 20 chrUextra 6219536 6220347 -22784309 + SAR_DM Satellite Satellite 180 986 -486 8 632 4029 63 36 23 chrUextra 6220447 6221065 -22783591 - MAX_I LTR Pao -6070 1844 1219 8 632 574 91 325 19 chrUextra 6221051 6221208 -22783448 - MAX_I LTR Pao -6560 1354 1150 8 632 2069 16 0 4 chrUextra 6221399 6221650 -22783006 + CIRCE LINE Composite 721 970 -5386 8 632 2169 57 9 84 chrUextra 6221792 6222138 -22782518 + CIRCE LINE Composite 973 1292 -5064 8 632 240 367 27 45 chrUextra 6221917 6222248 -22782408 + Gypsy12_I LTR Gypsy 2932 3256 -2290 8 632 21 89 0 0 chrUextra 6222960 6223016 -22781640 + AT_rich Low_complexity Low_complexity 1 56 0 8 632 23 68 0 0 chrUextra 6223054 6223098 -22781558 + AT_rich Low_complexity Low_complexity 1 44 0 8 632 26 30 0 0 chrUextra 6223144 6223177 -22781479 + AT_rich Low_complexity Low_complexity 1 33 0 8 632 6910 12 0 7 chrUextra 6223303 6224155 -22780501 - ROO_I LTR Pao -4481 3775 2930 8 632 3413 180 17 19 chrUextra 6224261 6225106 -22779550 + SAR_DM Satellite Satellite 369 1211 -261 8 632 21 89 0 0 chrUextra 6225440 6225496 -22779160 + AT_rich Low_complexity Low_complexity 1 56 0 8 632 23 68 0 0 chrUextra 6225534 6225578 -22779078 + AT_rich Low_complexity Low_complexity 1 44 0 8 632 26 30 0 0 chrUextra 6225624 6225657 -22778999 + AT_rich Low_complexity Low_complexity 1 33 0 8 632 345 23 0 0 chrUextra 6226016 6226059 -22778597 - PROTOP_B DNA P 0 1153 1111 8 632 7240 16 0 0 chrUextra 6226159 6227011 -22777645 + Gypsy2_I LTR Gypsy 828 1679 -4456 8 632 2979 201 33 12 chrUextra 6227112 6227957 -22776699 - SAR_DM Satellite Satellite -261 1211 349 8 632 968 130 0 0 chrUextra 6228063 6228225 -22776431 - IDEFIX_I LTR Gypsy -1062 4566 4405 8 632 1592 105 23 0 chrUextra 6228210 6228476 -22776180 - IDEFIX_I LTR Gypsy -2387 3241 2970 8 632 2135 88 145 0 chrUextra 6228473 6228915 -22775741 - IDEFIX_I LTR Gypsy -4091 1537 1032 8 632 4770 48 63 13 chrUextra 6229015 6229726 -22774930 - QUASIMODO_I LTR Gypsy -1065 4995 4249 8 632 69 13 0 0 chrUextra 6230358 6230434 -22774222 + AT_rich Low_complexity Low_complexity 1 76 0 8 632 21 0 0 0 chrUextra 6230787 6230808 -22773848 + AT_rich Low_complexity Low_complexity 1 21 0 8 632 840 84 8 0 chrUextra 6230919 6231050 -22773606 - ARS406_DM Unknown Unknown -221 132 1 8 632 3465 185 14 9 chrUextra 6230957 6231771 -22772885 + SAR_DM Satellite Satellite 195 1012 -460 8 632 3023 185 50 16 chrUextra 6231871 6232723 -22771933 - SAR_DM Satellite Satellite -515 881 1 8 632 6292 39 18 26 chrUextra 6232823 6233675 -22770981 + R1_DM LINE R1 3568 4412 -944 8 632 6641 30 40 0 chrUextra 6233775 6234627 -22770029 - NINJA_I LTR Pao -1798 4213 3328 8 632 3222 36 111 0 chrUextra 6235035 6235485 -22769171 + PROTOP DNA P 1 500 -3980 8 632 732 43 0 0 chrUextra 6235484 6235578 -22769078 + PROTOP DNA P 111 204 -4276 8 632 3129 183 24 19 chrUextra 6235681 6236531 -22768125 + SAR_DM Satellite Satellite 1 854 -208 8 632 6471 32 58 1 chrUextra 6236631 6237483 -22767173 + ROO_I LTR Pao 2186 3085 -5171 8 632 2905 113 83 63 chrUextra 6237583 6238170 -22766486 - R1_DM LINE R1 -4757 599 1 8 632 645 31 219 0 chrUextra 6238188 6238284 -22766372 + Gypsy6A_LTR LTR Gypsy 71 187 -233 8 632 550 29 0 0 chrUextra 6238365 6238435 -22766221 - R1_DM LINE R1 -3119 2237 2168 8 632 1258 42 18 0 chrUextra 6238535 6238703 -22765953 - Baggins1 LINE LOA -492 4961 4791 8 632 752 37 0 115 chrUextra 6239143 6239265 -22765391 - Baggins1 LINE LOA 0 5453 5346 8 632 3092 8 0 3 chrUextra 6239487 6239869 -22764787 + POGO DNA Pogo 1741 2121 0 8 632 1578 19 0 0 chrUextra 6239869 6240339 -22764317 + (TTATA)n Simple_repeat Simple_repeat 1 470 0 8 632 6688 8 25 0 chrUextra 6240439 6241235 -22763421 + DMRT1A LINE R1 1292 2107 -3076 8 632 451 0 18 0 chrUextra 6241235 6241290 -22763366 - PROTOP_B DNA P 0 1153 1098 8 632 781 298 33 33 chrUextra 6241474 6241621 -22763035 - Gypsy4_I LTR Gypsy -3176 2991 2810 8 632 1504 28 19 0 chrUextra 6241621 6241835 -22762821 - TLD2 Unknown Unknown 0 218 1 8 632 781 298 33 33 chrUextra 6241835 6242233 -22762423 - Gypsy4_I LTR Gypsy -3176 2809 2313 8 632 1179 0 0 0 chrUextra 6242341 6242472 -22762184 + (TTGTG)n Simple_repeat Simple_repeat 1 131 0 8 632 1229 13 33 0 chrUextra 6242472 6242624 -22762032 + DMRT1B LINE R1 3536 3692 -1491 8 632 3492 0 0 5 chrUextra 6242624 6243025 -22761631 + BLOOD_LTR LTR Gypsy 1 399 0 8 632 1390 0 0 6 chrUextra 6243025 6243191 -22761465 + BLOOD_I LTR Gypsy 1 165 -6448 8 632 5911 56 2 4 chrUextra 6243335 6244143 -22760513 + BATUMI_I LTR Pao 4315 5269 -2645 8 632 4779 104 12 29 chrUextra 6244245 6245094 -22759562 - Gypsy12_I LTR Gypsy -4193 1353 463 8 632 5651 12 1 3 chrUextra 6245194 6245874 -22758782 - DMRT1B LINE R1 -4504 679 1 8 632 2187 166 39 17 chrUextra 6246145 6246665 -22757991 - SAR_DM Satellite Satellite -446 1026 496 8 632 1627 153 3 6 chrUextra 6246680 6246996 -22757660 - SAR_DM Satellite Satellite -569 903 589 8 632 6369 1 116 12 chrUextra 6247096 6247947 -22756709 - ROO_I LTR Pao -7123 1133 194 8 632 4954 12 0 0 chrUextra 6248047 6248639 -22756017 + PROTOP DNA P 3889 4480 0 8 632 2135 27 0 0 chrUextra 6248639 6248897 -22755759 - R1_DM LINE R1 -2810 2546 2289 8 632 1707 23 0 0 chrUextra 6249949 6250169 -22754487 + ROO_I LTR Pao 8037 8256 0 8 632 1369 18 0 0 chrUextra 6250169 6250334 -22754322 + ROO_LTR LTR Pao 1 165 -263 8 632 3615 32 13 0 chrUextra 6250334 6250800 -22753856 - PROTOP_A DNA P 0 1105 634 8 632 6361 33 53 15 chrUextra 6250900 6251751 -22752905 - CIRCE LINE Composite -3031 3325 2443 8 632 2428 172 97 17 chrUextra 6252033 6252699 -22751957 + TART LINE telomeric 8952 9604 -4873 8 632 3170 5 0 0 chrUextra 6252802 6253169 -22751487 + R2_DM LINE R2 3241 3607 0 8 632 433 55 0 0 chrUextra 6253168 6253223 -22751433 + LSU-rRNA_Dme rRNA rRNA 2578 2632 -1268 8 632 2994 61 63 5 chrUextra 6253223 6253653 -22751003 + R1_DM LINE R1 1 455 -4901 8 632 6346 39 73 0 chrUextra 6253753 6254604 -22750052 + DMRT1B LINE R1 2662 3574 -1609 8 632 7127 6 0 14 chrUextra 6254706 6255555 -22749101 - Invader3_I LTR Gypsy -2836 2052 1216 8 632 2919 12 9 0 chrUextra 6255657 6256003 -22748653 - MAX_I LTR Pao -7565 349 1 8 632 2740 9 0 0 chrUextra 6256003 6256324 -22748332 - MAX_LTR LTR Pao 0 321 1 8 632 343 57 111 28 chrUextra 6256324 6256396 -22748260 - MAX_I LTR Pao -6898 1016 939 8 632 298 0 0 0 chrUextra 6256436 6256472 -22748184 - MAX_I LTR Pao -6959 955 920 8 632 6919 8 25 0 chrUextra 6256607 6257457 -22747199 + PROTOP_A DNA P 235 1105 0 8 632 1829 124 10 14 chrUextra 6257557 6257851 -22746805 + Gypsy12_I LTR Gypsy 1529 1821 -3725 8 632 3743 91 46 14 chrUextra 6257848 6258408 -22746248 + Gypsy12_I LTR Gypsy 4465 5042 -504 8 632 4657 39 48 1 chrUextra 6258508 6259359 -22745297 + DIVER_I LTR Pao 3151 4041 -1602 8 632 619 166 98 61 chrUextra 6260410 6260702 -22743954 - HETA LINE telomeric -5500 581 4 8 632 588 0 0 0 chrUextra 6260737 6260806 -22743850 - TAHRE LINE telomeric -9 10454 10386 8 632 258 125 0 0 chrUextra 6260795 6260835 -22743821 - TART LINE telomeric -6141 8336 8297 8 632 3645 0 0 0 chrUextra 6260835 6261261 -22743395 - TAHRE LINE telomeric -14 10449 10024 8 632 3517 185 21 23 chrUextra 6261361 6262212 -22742444 - SAR_DM Satellite Satellite -467 849 1 8 632 4432 104 29 9 chrUextra 6262312 6262685 -22741971 - R1_DM LINE R1 -4068 1288 897 8 632 243 88 0 0 chrUextra 6262685 6262719 -22741937 + (CGG)n Simple_repeat Simple_repeat 1 34 0 8 632 4432 104 29 9 chrUextra 6262719 6263046 -22741610 - R1_DM LINE R1 -4460 896 574 8 632 635 96 0 0 chrUextra 6263047 6263141 -22741515 - R1_DM LINE R1 -5184 172 79 8 632 2389 64 67 3 chrUextra 6263263 6263622 -22741034 - PROTOP_A DNA P -723 382 1 8 632 779 190 265 48 chrUextra 6263793 6264102 -22740554 - TART LINE telomeric -3986 10491 10116 8 632 3253 187 16 20 chrUextra 6264214 6265060 -22739596 + SAR_DM Satellite Satellite 388 1230 -242 8 632 7203 2 12 0 chrUextra 6265165 6266016 -22738640 + DM176_I LTR Gypsy 3311 4171 -2249 8 632 340 37 37 0 chrUextra 6266116 6266170 -22738486 + (TAAAG)n Simple_repeat Simple_repeat 3 58 0 8 632 2080 4 0 0 chrUextra 6266170 6266423 -22738233 + TART LINE telomeric 7786 8038 -6439 8 632 2608 183 4 9 chrUextra 6266422 6266967 -22737689 + HETA LINE telomeric 3044 3585 -2496 8 632 3360 183 38 9 chrUextra 6267067 6267913 -22736743 + SAR_DM Satellite Satellite 207 1076 -396 8 632 1527 309 22 22 chrUextra 6268109 6268843 -22735813 + Copia2_I LTR Copia 1358 2091 -2071 8 632 1050 187 35 23 chrUextra 6268969 6269226 -22735430 - Gypsy12_LTR LTR Gypsy -1005 1331 1072 8 632 1416 227 113 33 chrUextra 6269229 6269811 -22734845 - Gypsy12_LTR LTR Gypsy -549 1787 1159 8 632 240 86 0 0 chrUextra 6269939 6269974 -22734682 + (CAGA)n Simple_repeat Simple_repeat 4 38 0 8 632 231 88 0 0 chrUextra 6269988 6270022 -22734634 + (CA)n Simple_repeat Simple_repeat 1 34 0 8 632 243 0 0 0 chrUextra 6270180 6270207 -22734449 + (CA)n Simple_repeat Simple_repeat 1 27 0 8 632 2373 0 0 0 chrUextra 6270872 6271143 -22733513 + LSU-rRNA_Dme rRNA rRNA 2907 3177 -723 8 632 4934 3 0 0 chrUextra 6271144 6271722 -22732934 + R2_DM LINE R2 436 1013 -2594 8 632 22 88 0 0 chrUextra 6271839 6271896 -22732760 + AT_rich Low_complexity Low_complexity 1 57 0 8 632 23 78 0 0 chrUextra 6271934 6271985 -22732671 + AT_rich Low_complexity Low_complexity 1 51 0 8 632 26 30 0 0 chrUextra 6272031 6272064 -22732592 + AT_rich Low_complexity Low_complexity 1 33 0 8 632 492 34 0 0 chrUextra 6272226 6272285 -22732371 - PROTOP_B DNA P -640 513 455 8 632 1228 33 0 0 chrUextra 6272284 6272436 -22732220 - PROTOP_B DNA P -1001 152 1 8 632 287 123 83 30 chrUextra 6272576 6272673 -22731983 - TART LINE telomeric -3988 10489 10421 8 632 5456 40 11 30 chrUextra 6272773 6273624 -22731032 + TART LINE telomeric 3311 4436 -10041 8 632 2277 189 11 5 chrUextra 6273724 6274575 -22730081 - SAR_DM Satellite Satellite -667 856 1 8 632 2887 0 0 3 chrUextra 6274675 6275020 -22729636 + LINEJ1_DM LINE Jockey 4677 5020 0 8 632 6684 31 7 3 chrUextra 6275626 6276474 -22728182 + STALKER4_I LTR Gypsy 4068 4918 -1612 8 632 2232 100 55 59 chrUextra 6276593 6277428 -22727228 - DMSAT6 Satellite Satellite 0 831 1 8 632 602 39 0 0 chrUextra 6277528 6277605 -22727051 - DIVER2_I LTR Pao -2848 1299 1223 8 632 3506 17 0 2 chrUextra 6278479 6278881 -22725775 + R1_DM LINE R1 4956 5356 0 8 632 3098 75 7 7 chrUextra 6278902 6279330 -22725326 + R1_DM LINE R1 23 450 -4906 8 632 2808 262 28 19 chrUextra 6279430 6280281 -22724375 - G6_DM LINE Jockey -522 1520 662 8 632 6945 25 27 7 chrUextra 6280381 6281231 -22723425 + ROO_I LTR Pao 2223 3089 -5167 8 632 1057 43 26 153 chrUextra 6281332 6281522 -22723134 - Baggins1 LINE LOA -5145 308 143 8 632 679 38 123 143 chrUextra 6281934 6282088 -22722568 + PROTOP_B DNA P 328 478 -675 8 632 359 139 97 0 chrUextra 6282072 6282144 -22722512 + HOBO DNA hAT 330 408 -2608 8 632 306 42 83 0 chrUextra 6282134 6282182 -22722474 + HOBO DNA hAT 2337 2388 -628 8 632 1017 186 102 0 chrUextra 6282407 6282633 -22722023 + FW_DM LINE Jockey 1437 1685 -3007 8 632 590 67 0 0 chrUextra 6282648 6282723 -22721933 + FW_DM LINE Jockey 1898 1972 -2720 8 632 1345 145 25 8 chrUextra 6282721 6282958 -22721698 + FW_DM LINE Jockey 2403 2643 -2049 8 632 681 174 154 6 chrUextra 6282970 6283132 -22721524 + FW_DM LINE Jockey 2694 2879 -1813 8 632 192 40 0 0 chrUextra 6283277 6283302 -22721354 + (TAA)n Simple_repeat Simple_repeat 1 25 0 8 632 3715 177 33 15 chrUextra 6284184 6285031 -22719625 - SAR_DM Satellite Satellite -416 1056 195 8 632 2510 108 37 21 chrUextra 6285132 6285629 -22719027 - R1_DM LINE R1 -4331 1025 224 8 632 1618 59 0 5 chrUextra 6285612 6285818 -22718838 - R1_DM LINE R1 -118 5238 5034 8 632 1505 23 0 0 chrUextra 6285808 6285982 -22718674 - R1_DM LINE R1 -665 4691 4518 8 632 596 182 0 0 chrUextra 6286082 6286203 -22718453 - STALKER4_I LTR Gypsy -6175 355 235 8 632 31 58 0 0 chrUextra 6286204 6286256 -22718400 + AT_rich Low_complexity Low_complexity 1 52 0 8 632 3173 32 5 0 chrUextra 6286394 6286771 -22717885 - STALKER4_LTR LTR Gypsy -23 379 1 8 632 1371 31 0 0 chrUextra 6286771 6286932 -22717724 - DIVER_I LTR Pao -2347 3296 3136 8 632 1121 139 69 5 chrUextra 6287064 6287266 -22717390 - DNAREP1_DM LINE Penelope -358 236 22 8 632 5064 25 20 3 chrUextra 6287982 6288626 -22716030 - Invader2_I LTR Gypsy -3936 656 2 8 632 1467 78 10 5 chrUextra 6288627 6288832 -22715824 - Invader2_LTR LTR Gypsy 0 266 61 8 632 7292 25 0 0 chrUextra 6288933 6289782 -22714874 - FW_DM LINE Jockey -1062 3630 2782 8 632 3185 198 18 26 chrUextra 6289882 6290729 -22713927 + SAR_DM Satellite Satellite 430 1269 -203 8 632 4183 19 6 0 chrUextra 6290832 6291345 -22713311 - PROTOP DNA P -163 4317 3802 8 9 2309 41 56 0 chrUextra 6291340 6291682 -22712974 - PROTOP DNA P -3657 823 463 8 633 7325 21 0 1 chrUextra 6291782 6292632 -22712024 - DMRT1B LINE R1 -2197 2986 2138 8 633 23 0 0 0 chrUextra 6293003 6293026 -22711630 + AT_rich Low_complexity Low_complexity 1 23 0 8 633 1086 7 0 13 chrUextra 6293682 6293836 -22710820 + DOC LINE Jockey 4574 4725 0 8 633 5373 34 12 7 chrUextra 6293841 6294532 -22710124 + Gypsy12_LTR LTR Gypsy 1140 1833 -503 8 633 4014 169 10 10 chrUextra 6294648 6295479 -22709177 - SAR_DM Satellite Satellite -396 1076 246 8 633 1159 0 0 0 chrUextra 6295582 6295708 -22708948 - ROVER-I_DM LTR Gypsy -6458 126 1 8 633 3188 3 0 24 chrUextra 6295708 6296084 -22708572 - ROVER-LTR_DM LTR Gypsy 0 367 1 8 633 3170 0 0 0 chrUextra 6296084 6296432 -22708224 - DOC LINE Jockey -974 3751 3404 8 633 2880 176 43 15 chrUextra 6296545 6297381 -22707275 - SAR_DM Satellite Satellite -535 859 1 8 633 3845 37 21 33 chrUextra 6297482 6298330 -22706326 - DM176_I LTR Gypsy -5611 809 29 8 633 600 62 411 0 chrUextra 6298515 6298644 -22706012 + MAX_I LTR Pao 1173 1354 -6560 8 633 4566 61 32 21 chrUextra 6298628 6299282 -22705374 + MAX_I LTR Pao 1217 1877 -6037 8 633 1518 6 0 0 chrUextra 6299382 6299554 -22705102 - MDG1_I LTR Gypsy -6424 172 1 8 633 3730 20 0 0 chrUextra 6299554 6299996 -22704660 - MDG1_LTR LTR Gypsy 0 442 1 8 633 1976 32 0 12 chrUextra 6299996 6300232 -22704424 + MDG1_I LTR Gypsy 5762 5994 -602 8 633 2988 192 23 21 chrUextra 6300338 6301179 -22703477 + SAR_DM Satellite Satellite 1 842 -339 8 633 1383 0 7 0 chrUextra 6301282 6301436 -22703220 + LSU-rRNA_Dme rRNA rRNA 3746 3900 0 8 633 22 56 0 0 chrUextra 6301508 6301544 -22703112 + AT_rich Low_complexity Low_complexity 1 36 0 8 633 262 150 0 0 chrUextra 6301549 6301589 -22703067 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 633 262 150 0 0 chrUextra 6301644 6301684 -22702972 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 633 269 125 0 0 chrUextra 6301727 6301767 -22702889 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 633 22 56 0 0 chrUextra 6301780 6301816 -22702840 + AT_rich Low_complexity Low_complexity 1 36 0 8 633 907 9 0 27 chrUextra 6301842 6301954 -22702702 + NTS_DM Other Other 25 133 -107 8 633 1304 18 0 6 chrUextra 6301954 6302119 -22702537 + NTS_DM Other Other 38 201 -39 8 633 3735 190 12 9 chrUextra 6302233 6303074 -22701582 + SAR_DM Satellite Satellite 212 1054 -418 8 633 3604 183 31 11 chrUextra 6303182 6304031 -22700625 - SAR_DM Satellite Satellite -373 1099 234 8 633 1414 20 25 20 chrUextra 6304132 6304331 -22700325 + NTS_DM Other Other 41 240 0 8 633 1904 8 17 13 chrUextra 6304331 6304570 -22700086 + NTS_DM Other Other 1 240 0 8 633 1908 8 17 13 chrUextra 6304570 6304809 -22699847 + NTS_DM Other Other 1 240 0 8 633 1355 6 0 18 chrUextra 6304809 6304974 -22699682 + NTS_DM Other Other 1 162 -78 8 633 7794 0 5 0 chrUextra 6305082 6305932 -22698724 - Gypsy6_I LTR Gypsy -1496 5516 4663 8 633 7002 15 6 0 chrUextra 6306032 6306882 -22697774 - IDEFIX_I LTR Gypsy -1080 4548 3694 8 633 2547 156 110 10 chrUextra 6306982 6307603 -22697053 - TART LINE telomeric -4908 9569 8950 8 633 29 28 0 0 chrUextra 6307749 6307785 -22696871 + AT_rich Low_complexity Low_complexity 1 36 0 8 633 233 332 67 62 chrUextra 6308312 6308713 -22695943 + Copia2_I LTR Copia 1497 1899 -2263 8 633 1558 289 35 32 chrUextra 6308882 6309690 -22694966 - SAR_DM Satellite Satellite -456 1016 207 8 633 325 315 44 11 chrUextra 6309540 6309723 -22694933 + XDMR Unknown Unknown 1 189 -172 8 633 822 31 0 0 chrUextra 6309859 6309957 -22694699 + ARS406_DM Unknown Unknown 92 189 -164 8 633 2053 160 10 9 chrUextra 6309869 6310680 -22693976 - SAR_DM Satellite Satellite -571 811 1 8 633 3305 41 0 0 chrUextra 6310780 6311191 -22693465 + FW_DM LINE Jockey 4282 4692 0 8 633 3544 41 2 2 chrUextra 6311193 6311629 -22693027 - R1_DM LINE R1 -3966 1390 955 8 633 24 0 0 0 chrUextra 6311814 6311838 -22692818 + AT_rich Low_complexity Low_complexity 1 24 0 8 633 2153 4 0 0 chrUextra 6311950 6312195 -22692461 - FW_DM LINE Jockey -6 4686 4442 8 633 22 56 0 0 chrUextra 6312248 6312284 -22692372 + AT_rich Low_complexity Low_complexity 1 36 0 8 633 981 127 0 0 chrUextra 6312679 6312836 -22691820 + (TA)n Simple_repeat Simple_repeat 1 157 0 8 633 230 180 62 47 chrUextra 6312836 6312900 -22691756 - Stalker2_LTR LTR Gypsy -134 290 226 8 633 1137 146 0 3 chrUextra 6312900 6313526 -22691130 + (TA)n Simple_repeat Simple_repeat 1 624 0 8 633 5151 76 52 22 chrUextra 6313628 6314476 -22690180 + STALKER4_I LTR Gypsy 634 1506 -5024 8 633 3185 98 7 11 chrUextra 6314576 6315028 -22689628 + Gypsy12_I LTR Gypsy 2005 2454 -3092 8 633 2361 128 38 18 chrUextra 6315027 6315425 -22689231 + Gypsy12_I LTR Gypsy 2299 2704 -2842 8 633 4586 16 118 1 chrUextra 6315525 6316374 -22688282 - R1_DM LINE R1 -2401 2955 2008 8 633 2394 0 4 0 chrUextra 6316474 6316747 -22687909 - Copia_I LTR Copia -4319 274 1 8 633 2323 14 0 0 chrUextra 6316747 6317023 -22687633 - Copia_LTR LTR Copia 0 276 1 8 633 682 335 10 0 chrUextra 6317023 6317323 -22687333 + HMSBEAGLE_I LTR Gypsy 3819 4121 -2408 8 633 972 0 27 0 chrUextra 6317423 6317535 -22687121 + DMRT1B LINE R1 5069 5183 0 8 633 1658 26 0 0 chrUextra 6317540 6317730 -22686926 - R1_DM LINE R1 -760 4596 4407 8 633 2532 11 126 2 chrUextra 6317750 6318272 -22686384 - R1_DM LINE R1 -1074 4282 3696 8 633 1986 9 5 0 chrUextra 6318372 6318595 -22686061 - MAX_I LTR Pao -7690 224 1 8 633 2896 6 0 0 chrUextra 6318595 6318916 -22685740 - MAX_LTR LTR Pao 0 321 1 8 633 2426 10 0 0 chrUextra 6318917 6319221 -22685435 - Invader2_I LTR Gypsy -204 4388 4085 8 633 1828 9 78 4 chrUextra 6319323 6319554 -22685102 + MICROPIA_I LTR Gypsy 4229 4476 0 8 633 4041 13 0 61 chrUextra 6319554 6320061 -22684595 + MICROPIA_LTR LTR Gypsy 1 476 0 8 633 287 265 0 47 chrUextra 6320063 6320170 -22684486 + Gypsy12_LTR LTR Gypsy 1119 1220 -1116 8 633 6815 32 7 6 chrUextra 6320270 6321119 -22683537 - IDEFIX_I LTR Gypsy -2256 3372 2523 8 633 3367 0 0 0 chrUextra 6321219 6321589 -22683067 + LSU-rRNA_Dme rRNA rRNA 2214 2583 -1317 8 633 1930 4 17 13 chrUextra 6321629 6321868 -22682788 + NTS_DM Other Other 1 240 0 8 633 555 16 0 0 chrUextra 6321868 6321930 -22682726 + NTS_DM Other Other 1 62 -178 8 633 1296 0 0 0 chrUextra 6321926 6322068 -22682588 + R2_DM LINE R2 2081 2222 -1385 8 633 3063 14 3 0 chrUextra 6322168 6322516 -22682140 + Invader1_LTR LTR Gypsy 75 423 0 8 633 1058 23 15 8 chrUextra 6322516 6322644 -22682012 + CIRCE LINE Composite 4367 4495 -1861 8 633 2174 95 11 8 chrUextra 6322644 6323017 -22681639 + S_DM DNA Tc1 1 374 -1362 8 633 2126 0 8 0 chrUextra 6323117 6323358 -22681298 - R1_DM LINE R1 -5113 243 1 8 633 5434 2 0 0 chrUextra 6323371 6323966 -22680690 - LSU-rRNA_Dme rRNA rRNA -1257 2643 2049 8 633 5344 6 0 0 chrUextra 6324066 6324691 -22679965 + Invader2_I LTR Gypsy 3749 4373 -219 8 633 1353 7 0 0 chrUextra 6324692 6324843 -22679813 + Invader2_LTR LTR Gypsy 116 266 0 8 633 5827 75 78 7 chrUextra 6325016 6325862 -22678794 - DMCR1A LINE CR1 -319 4151 3246 8 633 1701 55 5 0 chrUextra 6325964 6326184 -22678472 - Baggins1 LINE LOA -442 5011 4791 8 633 1330 29 0 76 chrUextra 6326629 6326813 -22677843 - Baggins1 LINE LOA 0 5453 5284 8 633 473 210 24 24 chrUextra 6327060 6327187 -22677469 - HETRP_DM Satellite Satellite -197 1675 1549 8 633 192 40 0 0 chrUextra 6327187 6327212 -22677444 + (TC)n Simple_repeat Simple_repeat 2 26 0 8 633 687 193 14 14 chrUextra 6327338 6327485 -22677171 - HETRP_DM Satellite Satellite -197 1675 1529 8 633 520 188 25 17 chrUextra 6327643 6327762 -22676894 - HETRP_DM Satellite Satellite -197 1675 1556 8 633 5254 20 0 0 chrUextra 6327862 6328461 -22676195 - FW_DM LINE Jockey -3694 998 400 8 633 2216 12 0 0 chrUextra 6328461 6328711 -22675945 + STALKER4_LTR LTR Gypsy 1 250 -152 8 633 3311 189 51 22 chrUextra 6328812 6329660 -22674996 + SAR_DM Satellite Satellite 340 1211 -261 8 633 2600 167 11 8 chrUextra 6329760 6330285 -22674371 - SAR_DM Satellite Satellite -620 852 326 8 633 1572 102 0 59 chrUextra 6330712 6330984 -22673672 - Gypsy12_I LTR Gypsy -4666 880 625 8 633 2147 72 18 39 chrUextra 6330977 6331309 -22673347 - Gypsy12_I LTR Gypsy -5221 325 1 8 633 1319 159 49 4 chrUextra 6331309 6331555 -22673101 - Gypsy12A_LTR LTR Gypsy 0 2280 2024 8 633 26 82 0 0 chrUextra 6331969 6332030 -22672626 + AT_rich Low_complexity Low_complexity 1 61 0 8 633 286 278 51 10 chrUextra 6332182 6332280 -22672376 - DMCR1A LINE CR1 -616 3854 3753 8 633 372 280 17 0 chrUextra 6332294 6332412 -22672244 - DMCR1A LINE CR1 -776 3694 3575 8 633 3558 7 11 32 chrUextra 6332607 6333044 -22671612 + DM176_LTR LTR Gypsy 80 507 0 8 633 674 268 0 5 chrUextra 6333127 6333333 -22671323 - Copia2_I LTR Copia -97 4065 3861 8 633 946 9 9 0 chrUextra 6333337 6333452 -22671204 - DM176_I LTR Gypsy -1841 4579 4464 8 633 5041 7 59 0 chrUextra 6333556 6334405 -22670251 + ROO_I LTR Pao 4743 5641 -2615 8 633 3427 168 62 60 chrUextra 6334510 6335354 -22669302 - IDEFIX_I LTR Gypsy -4497 1131 287 8 633 5492 0 0 2 chrUextra 6335454 6336085 -22668571 - DOC LINE Jockey -4085 640 11 8 633 1780 14 0 0 chrUextra 6336085 6336303 -22668353 - FW_DM LINE Jockey -1614 3078 2861 8 633 2289 103 18 30 chrUextra 6336412 6337252 -22667404 - DMSAT6 Satellite Satellite 0 830 1 8 633 3542 229 28 50 chrUextra 6337357 6338835 -22665821 - SAR_DM Satellite Satellite -371 1444 1 8 633 591 266 61 32 chrUextra 6338533 6338878 -22665778 + XDMR_DM Unknown Unknown 6 360 0 8 633 1149 162 40 26 chrUextra 6338875 6339148 -22665508 - SAR_DM Satellite Satellite -674 798 522 8 633 3370 186 31 10 chrUextra 6339253 6340078 -22664578 - SAR_DM Satellite Satellite -435 1037 195 8 633 660 124 0 0 chrUextra 6339985 6340098 -22664558 + ARS406_DM Unknown Unknown 1 113 -240 8 633 2021 193 99 39 chrUextra 6340209 6340906 -22663750 - TAHRE LINE telomeric -9707 756 18 8 633 605 67 11 11 chrUextra 6340955 6341046 -22663610 - HETA LINE telomeric -5 6076 5986 8 633 7249 6 0 0 chrUextra 6341146 6341994 -22662662 + R1_DM LINE R1 2486 3333 -2023 8 633 963 67 0 0 chrUextra 6342094 6342228 -22662428 + ROO_I LTR Pao 8123 8256 0 8 633 2708 27 24 0 chrUextra 6342228 6342563 -22662093 + ROO_LTR LTR Pao 1 343 -85 8 633 2567 33 8 6 chrUextra 6342577 6342942 -22661714 + S_DM DNA Tc1 1 366 -1370 8 633 4547 7 0 0 chrUextra 6343990 6344544 -22660112 - Invader2_I LTR Gypsy -1699 2893 2340 8 633 2202 37 0 3 chrUextra 6344542 6344838 -22659818 - Invader2_I LTR Gypsy -2648 1944 1650 8 633 22 35 0 0 chrUextra 6345200 6345229 -22659427 + AT_rich Low_complexity Low_complexity 1 29 0 8 633 51 31 0 0 chrUextra 6345404 6345469 -22659187 + AT_rich Low_complexity Low_complexity 1 65 0 8 633 998 150 0 5 chrUextra 6345892 6346086 -22658570 - NTS_DM Other Other -47 193 1 8 633 285 104 21 0 chrUextra 6346168 6346216 -22658440 - NTS_DM Other Other -191 49 1 8 633 548 121 106 29 chrUextra 6346216 6346386 -22658270 - NTS_DM Other Other 0 240 58 8 633 540 214 0 0 chrUextra 6346425 6346603 -22658053 + (CATAA)n Simple_repeat Simple_repeat 2 179 0 8 633 374 272 0 0 chrUextra 6346609 6346734 -22657922 + (CATAG)n Simple_repeat Simple_repeat 1 125 0 8 633 6220 42 38 20 chrUextra 6346834 6347682 -22656974 - Copia2_I LTR Copia -544 3618 2756 8 633 22 35 0 0 chrUextra 6347820 6347849 -22656807 + AT_rich Low_complexity Low_complexity 1 29 0 8 633 58 15 0 0 chrUextra 6348024 6348089 -22656567 + AT_rich Low_complexity Low_complexity 1 65 0 8 633 216 121 51 17 chrUextra 6348571 6348630 -22656026 + (TTA)n Simple_repeat Simple_repeat 2 62 0 8 633 2775 72 14 40 chrUextra 6348731 6349177 -22655479 - Gypsy12_I LTR Gypsy -5107 439 6 8 633 488 51 49 25 chrUextra 6349176 6349257 -22655399 - Gypsy12_I LTR Gypsy -5459 87 5 8 633 1657 118 111 9 chrUextra 6349254 6349578 -22655078 - Gypsy12A_LTR LTR Gypsy -45 2235 1879 8 633 3265 31 101 4 chrUextra 6349678 6350134 -22654522 + IDEFIX_LTR LTR Gypsy 95 594 0 8 633 703 80 0 94 chrUextra 6350140 6350278 -22654378 - MDG1_I LTR Gypsy -5818 778 654 8 633 574 103 8 49 chrUextra 6350403 6350526 -22654130 - MDG1_I LTR Gypsy -6012 584 467 8 633 6979 18 2 1 chrUextra 6350626 6351467 -22653189 - FW_DM LINE Jockey -503 4189 3348 8 633 5860 106 0 0 chrUextra 6351574 6352422 -22652234 + HMSBEAGLE_I LTR Gypsy 4514 5361 -1168 8 633 6379 35 42 0 chrUextra 6352522 6353370 -22651286 + IDEFIX_I LTR Gypsy 1818 2701 -2927 8 633 6898 17 14 0 chrUextra 6353470 6354314 -22650342 - BLOOD_I LTR Gypsy -3579 3034 2179 8 633 2230 120 20 32 chrUextra 6354420 6355266 -22649390 + DMSAT6 Satellite Satellite 1 835 -64 8 633 427 139 13 0 chrUextra 6355366 6355445 -22649211 + ARS406_DM Unknown Unknown 108 187 -166 8 633 2749 213 29 13 chrUextra 6355385 6356214 -22648442 - SAR_DM Satellite Satellite -242 1230 389 8 633 1481 6 0 0 chrUextra 6356314 6356488 -22648168 + Copia2_LTR_DM LTR Copia 25 198 0 8 633 25 51 0 0 chrUextra 6356528 6356567 -22648089 + AT_rich Low_complexity Low_complexity 1 39 0 8 633 640 90 10 0 chrUextra 6357262 6357362 -22647294 - SAR_DM Satellite Satellite -643 829 729 8 633 1901 164 21 11 chrUextra 6357373 6358110 -22646546 - SAR_DM Satellite Satellite -836 744 1 8 633 2668 19 0 0 chrUextra 6358210 6358529 -22646127 + R1_DM LINE R1 5038 5356 0 8 633 4556 11 0 0 chrUextra 6358527 6359058 -22645598 + LSU-rRNA_Dme rRNA rRNA 2640 3170 -730 8 633 1886 286 29 20 chrUextra 6359202 6359997 -22644659 - ROVER-I_DM LTR Gypsy -4933 1651 850 8 633 34 24 0 0 chrUextra 6360199 6360240 -22644416 + AT_rich Low_complexity Low_complexity 1 41 0 8 633 21 95 0 0 chrUextra 6360453 6360516 -22644140 + AT_rich Low_complexity Low_complexity 1 63 0 8 633 3183 12 0 59 chrUextra 6360528 6360954 -22643702 + LSU-rRNA_Dme rRNA rRNA 1 401 -3499 8 633 7285 1 0 0 chrUextra 6361054 6361902 -22642754 - Invader3_I LTR Gypsy -2418 2470 1623 8 633 3411 168 24 23 chrUextra 6362016 6362849 -22641807 + SAR_DM Satellite Satellite 326 1159 -313 8 633 3903 64 4 4 chrUextra 6362951 6363481 -22641175 - R1_DM LINE R1 -4826 530 1 8 633 2322 28 14 0 chrUextra 6363514 6363798 -22640858 - R1_DM LINE R1 0 5356 5069 8 633 1334 121 29 0 chrUextra 6364203 6364442 -22640214 + DNAREP1_DM LINE Penelope 1 246 -348 8 633 6161 73 13 9 chrUextra 6364846 6365694 -22638962 + Gypsy12_I LTR Gypsy 4332 5182 -364 8 633 3200 5 3 0 chrUextra 6366250 6366642 -22638014 + IDEFIX_I LTR Gypsy 4266 4658 -970 8 633 449 15 131 5 chrUextra 6366744 6366950 -22637706 + (TA)n Simple_repeat Simple_repeat 1 231 0 8 633 1832 264 22 18 chrUextra 6366955 6367584 -22637072 - FROGGER_I LTR Copia -154 1923 1292 8 633 6179 35 46 8 chrUextra 6367709 6368538 -22636118 - DOC3_DM LINE Jockey -717 4023 3164 8 633 6318 28 67 18 chrUextra 6368638 6369484 -22635172 + Gypsy12_I LTR Gypsy 363 1250 -4296 8 633 238 89 0 82 chrUextra 6369588 6369637 -22635019 - DMCR1A LINE CR1 -4424 46 2 8 633 26 82 0 0 chrUextra 6370193 6370254 -22634402 + AT_rich Low_complexity Low_complexity 1 61 0 8 633 1197 0 0 0 chrUextra 6370534 6370674 -22633982 - NOMAD_I LTR Gypsy -6432 140 1 8 633 4527 0 0 0 chrUextra 6370674 6371192 -22633464 - NOMAD_LTR LTR Gypsy 0 518 1 8 633 1944 13 0 0 chrUextra 6372426 6372651 -22632005 - Invader1_I LTR Gypsy -2961 225 1 8 633 3579 14 2 0 chrUextra 6372651 6373073 -22631583 - Invader1_LTR LTR Gypsy 0 423 1 8 633 1712 10 0 0 chrUextra 6373073 6373273 -22631383 - CIRCE LINE Composite -1984 4372 4173 8 633 7083 11 1 1 chrUextra 6373373 6374220 -22630436 + R1_DM LINE R1 3451 4297 -1059 8 633 3381 196 15 21 chrUextra 6374320 6375166 -22629490 + SAR_DM Satellite Satellite 1 840 -208 8 633 322 156 61 24 chrUextra 6375948 6376112 -22628544 + GA-rich Low_complexity Low_complexity 5 174 0 8 633 3106 185 14 22 chrUextra 6377161 6378008 -22626648 - SAR_DM Satellite Satellite -559 840 1 8 633 5435 57 1 14 chrUextra 6378110 6378955 -22625701 + CIRCE LINE Composite 2287 3170 -3186 8 633 1519 86 12 8 chrUextra 6379056 6379313 -22625343 + S_DM DNA Tc1 163 420 -1316 8 633 1466 74 0 0 chrUextra 6379312 6379542 -22625114 + S_DM DNA Tc1 1507 1736 0 8 633 1181 42 6 0 chrUextra 6379542 6379701 -22624955 + CIRCE LINE Composite 4493 4652 -1704 8 633 395 66 0 0 chrUextra 6379702 6379763 -22624893 + CIRCE LINE Composite 4561 4621 -1735 8 633 1110 56 0 0 chrUextra 6379759 6379902 -22624754 + CIRCE LINE Composite 4838 4980 -1376 8 633 828 329 16 8 chrUextra 6380007 6380626 -22624030 - TABOR_I LTR Gypsy -3362 2974 2351 8 633 753 127 8 47 chrUextra 6380951 6381118 -22623538 - Gypsy12_I LTR Gypsy -4870 676 459 8 633 1754 87 20 37 chrUextra 6381131 6381430 -22623226 - Gypsy12_I LTR Gypsy -5206 340 47 8 633 1512 195 16 27 chrUextra 6381427 6381796 -22622860 - Gypsy12_LTR LTR Gypsy -1938 398 34 8 633 3571 176 12 18 chrUextra 6381896 6382737 -22621919 + SAR_DM Satellite Satellite 212 1047 -425 8 633 3329 178 19 20 chrUextra 6382858 6383690 -22620966 + SAR_DM Satellite Satellite 326 1156 -316 8 633 529 0 0 0 chrUextra 6383790 6383851 -22620805 - BLASTOPIA_I LTR Gypsy -4420 61 1 8 633 2092 19 7 11 chrUextra 6383851 6384123 -22620533 - BLASTOPIA_LTR LTR Gypsy 0 275 5 8 633 1161 118 0 0 chrUextra 6384123 6384301 -22620355 + (CATA)n Simple_repeat Simple_repeat 3 180 0 8 633 1158 122 0 0 chrUextra 6384301 6384633 -22620023 + (TA)n Simple_repeat Simple_repeat 1 332 0 8 633 26 0 0 0 chrUextra 6385136 6385162 -22619494 + AT_rich Low_complexity Low_complexity 1 26 0 8 633 6845 19 6 1 chrUextra 6385684 6386531 -22618125 - R1_DM LINE R1 -1092 4264 3414 8 633 2088 216 30 44 chrUextra 6386631 6387478 -22617178 + SAR_DM Satellite Satellite 1 835 -396 8 633 4529 23 96 0 chrUextra 6387578 6388390 -22616266 - NINJA_I LTR Pao -3167 2844 1955 8 633 4620 4 0 2 chrUextra 6388525 6389026 -22615630 - R2_DM LINE R2 -3080 527 28 8 633 3224 0 0 0 chrUextra 6389027 6389372 -22615284 - LSU-rRNA_Dme rRNA rRNA -1319 2581 2237 8 633 1312 197 16 13 chrUextra 6389472 6389785 -22614871 - SAR_DM Satellite Satellite -677 795 482 8 633 1978 128 12 28 chrUextra 6390420 6390741 -22613915 - GTWIN_LTR LTR Gypsy -179 316 1 8 633 4333 40 0 0 chrUextra 6390741 6391266 -22613390 - QUASIMODO_I LTR Gypsy -1808 4252 3728 8 633 28 79 0 0 chrUextra 6392030 6392093 -22612563 + AT_rich Low_complexity Low_complexity 1 63 0 8 633 3577 186 22 21 chrUextra 6392313 6393160 -22611496 + SAR_DM Satellite Satellite 355 1202 -270 8 633 4679 16 1 2 chrUextra 6393260 6394107 -22610549 - STALKER4_I LTR Gypsy -3625 2905 1990 8 633 3048 167 20 11 chrUextra 6394207 6395048 -22609608 - SAR_DM Satellite Satellite -404 849 1 8 633 2651 96 46 18 chrUextra 6395154 6396001 -22608655 + DMSAT6 Satellite Satellite 1 870 -3 8 633 1057 15 0 0 chrUextra 6396101 6396232 -22608424 + DOC2_DM LINE Jockey 4663 4793 0 8 633 6019 27 34 4 chrUextra 6396237 6396948 -22607708 + TAHRE LINE telomeric 1158 1889 -8574 8 633 2993 130 43 2 chrUextra 6397048 6397894 -22606762 - DOC3_DM LINE Jockey -306 4434 3674 8 633 7397 19 17 2 chrUextra 6397995 6398840 -22605816 + Gypsy4_I LTR Gypsy 5232 6088 -200 8 633 2966 0 0 3 chrUextra 6398942 6399265 -22605391 + R1_DM LINE R1 5035 5356 0 8 633 4754 13 2 4 chrUextra 6399259 6399789 -22604867 + R2_DM LINE R2 1665 2193 -1414 8 633 459 0 18 0 chrUextra 6399889 6399946 -22604710 + TABOR_I LTR Gypsy 6279 6336 0 8 633 2316 8 0 0 chrUextra 6399944 6400195 -22604461 + TABOR_LTR LTR Gypsy 1 251 -255 8 633 4936 11 2 0 chrUextra 6400185 6400736 -22603920 - DMRT1B LINE R1 -2980 2203 1652 8 633 2607 101 27 8 chrUextra 6400836 6401683 -22602973 + DMSAT6 Satellite Satellite 1 863 -40 8 633 6478 45 28 12 chrUextra 6401783 6402630 -22602026 - R1_DM LINE R1 -4125 1231 371 8 633 963 87 0 0 chrUextra 6402730 6402868 -22601788 + ARS406_DM Unknown Unknown 52 189 -164 8 633 3378 204 14 18 chrUextra 6402745 6403576 -22601080 - SAR_DM Satellite Satellite -535 827 1 8 633 3560 12 2 0 chrUextra 6403676 6404075 -22600581 + R1_DM LINE R1 4957 5356 0 8 633 3211 61 10 5 chrUextra 6404108 6404522 -22600134 + R1_DM LINE R1 1 416 -4940 8 633 2607 102 14 17 chrUextra 6404622 6405468 -22599188 - DMSAT6 Satellite Satellite -23 843 1 8 633 28 48 0 0 chrUextra 6406035 6406077 -22598579 + AT_rich Low_complexity Low_complexity 1 42 0 8 633 7528 9 2 1 chrUextra 6406514 6407360 -22597296 - G_DM LINE Jockey -2326 2020 1174 8 633 1769 326 16 6 chrUextra 6407676 6408306 -22596350 + Gypsy6_I LTR Gypsy 945 1580 -5432 8 633 3495 183 29 20 chrUextra 6408406 6409252 -22595404 + SAR_DM Satellite Satellite 1 853 -202 8 633 2502 90 30 39 chrUextra 6409385 6410197 -22594459 - DMSAT6 Satellite Satellite 0 803 1 8 633 2977 14 0 6 chrUextra 6410298 6410654 -22594002 + TART LINE telomeric 14124 14477 0 8 633 1043 235 165 35 chrUextra 6410660 6411144 -22593512 + TART LINE telomeric 3235 3781 -10696 8 633 323 224 11 34 chrUextra 6411624 6411712 -22592944 - Gypsy6_LTR LTR Gypsy -168 239 154 8 633 705 193 7 14 chrUextra 6412219 6412361 -22592295 + HETRP_DM Satellite Satellite 1529 1669 -203 8 633 692 185 7 15 chrUextra 6412497 6412634 -22592022 + HETRP_DM Satellite Satellite 1529 1664 -208 8 633 642 221 13 25 chrUextra 6412777 6412935 -22591721 + HETRP_DM Satellite Satellite 1529 1684 -188 8 633 3584 226 14 14 chrUextra 6413140 6413979 -22590677 - TABOR_I LTR Gypsy -1456 4880 4042 8 633 7268 26 1 0 chrUextra 6414082 6414921 -22589735 + R1_DM LINE R1 3946 4785 -571 8 633 628 320 52 20 chrUextra 6415168 6415678 -22588978 + TIRANT_I LTR Gypsy 3586 3921 -3771 8 633 1455 34 43 9 chrUextra 6415612 6415823 -22588833 + TLD2 Unknown Unknown 1 218 0 8 633 6573 53 60 3 chrUextra 6415974 6416820 -22587836 + DMCR1A LINE CR1 1832 2725 -1745 8 633 3591 181 13 11 chrUextra 6416920 6417766 -22586890 - SAR_DM Satellite Satellite -470 848 1 8 633 21 95 0 0 chrUextra 6417900 6417963 -22586693 + AT_rich Low_complexity Low_complexity 1 63 0 8 633 34 24 0 0 chrUextra 6418176 6418217 -22586439 + AT_rich Low_complexity Low_complexity 1 41 0 8 633 2906 182 58 16 chrUextra 6418812 6419658 -22584998 + SAR_DM Satellite Satellite 1 881 -203 8 633 1607 17 0 0 chrUextra 6419758 6419935 -22584721 + PROTOP_A DNA P 929 1105 0 8 633 976 58 0 0 chrUextra 6419935 6420056 -22584600 + TART LINE telomeric 10539 10659 -3818 8 633 1703 185 19 60 chrUextra 6420106 6420590 -22584066 + TAHRE LINE telomeric 18 481 -9982 8 633 4149 173 8 9 chrUextra 6420705 6421544 -22583112 - SAR_DM Satellite Satellite -440 1032 195 8 633 1245 94 0 0 chrUextra 6421656 6421869 -22582787 + (TCTCC)n Simple_repeat Simple_repeat 1 213 0 8 633 1620 5 0 2 chrUextra 6421879 6422270 -22582386 + (GAGAA)n Simple_repeat Simple_repeat 1 390 0 8 634 41 0 0 0 chrUextra 6422596 6422637 -22582019 + AT_rich Low_complexity Low_complexity 1 41 0 8 634 635 67 32 31 chrUextra 6423152 6423266 -22581390 - BATUMI_LTR LTR Pao -152 120 35 8 634 1289 70 0 11 chrUextra 6423266 6423440 -22581216 - BATUMI_I LTR Pao 0 7963 7792 8 634 7488 5 12 1 chrUextra 6423542 6424388 -22580268 - G_DM LINE Jockey -3200 1146 292 8 634 2067 187 8 7 chrUextra 6424488 6425315 -22579341 + SAR_DM Satellite Satellite 1 827 -558 8 634 323 306 32 98 chrUextra 6425677 6425923 -22578733 + ACCORD2_I LTR Gypsy 526 755 -6457 8 634 2608 48 18 0 chrUextra 6425950 6426280 -22578376 - IDEFIX_I LTR Gypsy -1793 3835 3500 8 634 2538 95 26 18 chrUextra 6426381 6427226 -22577430 - DMSAT6 Satellite Satellite -17 851 1 8 634 4309 8 16 0 chrUextra 6427326 6427813 -22576843 + Copia2_I LTR Copia 629 1123 -3039 8 634 3262 11 0 11 chrUextra 6427797 6428171 -22576485 + Copia2_I LTR Copia 1226 1595 -2567 8 634 6133 45 15 48 chrUextra 6428271 6429116 -22575540 - BATUMI_I LTR Pao -5145 2818 2002 8 634 5028 25 22 0 chrUextra 6429216 6429807 -22574849 + R1_DM LINE R1 4753 5356 0 8 634 1733 55 9 0 chrUextra 6429840 6430060 -22574596 + R1_DM LINE R1 1 222 -5134 8 634 2480 4 0 4 chrUextra 6430161 6430432 -22574224 + TABOR_LTR LTR Gypsy 237 506 0 8 634 1024 42 0 40 chrUextra 6430432 6430554 -22574102 + STALKER4_I LTR Gypsy 6415 6530 0 8 634 3387 50 1 16 chrUextra 6430554 6430992 -22573664 + STALKER4_LTR LTR Gypsy 1 399 -3 8 634 1488 26 21 5 chrUextra 6431106 6431298 -22573358 - PROTOP DNA P -514 3966 3772 8 634 5311 26 27 6 chrUextra 6431295 6431951 -22572705 - PROTOP DNA P -3182 1298 629 8 634 33 43 0 41 chrUextra 6432228 6432301 -22572355 + AT_rich Low_complexity Low_complexity 1 70 0 8 634 37 23 0 0 chrUextra 6432392 6432436 -22572220 + AT_rich Low_complexity Low_complexity 1 44 0 8 634 21 0 0 0 chrUextra 6432457 6432478 -22572178 + AT_rich Low_complexity Low_complexity 1 21 0 8 634 1546 12 0 0 chrUextra 6432726 6432896 -22571760 - PROTOP_A DNA P -87 1018 849 8 634 1721 113 42 45 chrUextra 6432996 6433329 -22571327 + Stalker2_I LTR Gypsy 572 903 -6499 8 634 23 0 0 0 chrUextra 6433443 6433466 -22571190 + AT_rich Low_complexity Low_complexity 1 23 0 8 634 239 346 26 19 chrUextra 6433540 6433808 -22570848 + BLOOD_I LTR Gypsy 1456 1725 -4888 8 634 3417 189 9 8 chrUextra 6433943 6434786 -22569870 + SAR_DM Satellite Satellite 1 843 -539 8 634 2673 78 38 25 chrUextra 6434886 6435731 -22568925 - DMSAT6 Satellite Satellite -33 855 1 8 634 7116 23 1 8 chrUextra 6435831 6436676 -22567980 + QUASIMODO_I LTR Gypsy 660 1498 -4562 8 634 3680 180 22 19 chrUextra 6436776 6437608 -22567048 - SAR_DM Satellite Satellite -459 1013 180 8 634 510 176 16 25 chrUextra 6437499 6437621 -22567035 + ARS406_DM Unknown Unknown 1 121 -232 8 634 3535 193 16 25 chrUextra 6437725 6438565 -22566091 - SAR_DM Satellite Satellite -216 1256 425 8 634 3539 5 0 0 chrUextra 6438666 6439058 -22565598 - DMRT1B LINE R1 -2663 2520 2129 8 634 2881 9 0 0 chrUextra 6439057 6439377 -22565279 - DMRT1B LINE R1 -3159 2024 1705 8 634 337 277 0 10 chrUextra 6439406 6439508 -22565148 + Copia_I LTR Copia 3721 3821 -772 8 634 2660 89 90 117 chrUextra 6439611 6440122 -22564534 + Invader1_I LTR Gypsy 2690 3186 0 8 634 1960 111 57 24 chrUextra 6440123 6440456 -22564200 + Invader1_LTR LTR Gypsy 2 345 -78 8 634 3978 185 7 8 chrUextra 6440556 6441389 -22563267 + SAR_DM Satellite Satellite 245 1076 -396 8 634 7215 27 9 1 chrUextra 6441501 6442346 -22562310 + R1_DM LINE R1 4160 5011 -345 8 634 5603 81 93 21 chrUextra 6442446 6443291 -22561365 + TART_B1 LINE telomeric 3192 4097 -6557 8 634 7574 5 12 0 chrUextra 6443391 6444236 -22560420 - DM176_I LTR Gypsy -1959 4461 3607 8 634 1015 62 0 6 chrUextra 6444338 6444501 -22560155 + DM297_I LTR Gypsy 1122 1283 -4884 8 634 2394 18 3 0 chrUextra 6444509 6444795 -22559861 - Gypsy4_LTR LTR Gypsy 0 287 1 8 634 3030 26 36 5 chrUextra 6444795 6445181 -22559475 - Gypsy4_I LTR Gypsy 0 6288 5891 8 634 2312 122 30 8 chrUextra 6445289 6446126 -22558530 - DMSAT6 Satellite Satellite -2 855 1 8 634 6994 6 0 14 chrUextra 6446226 6447071 -22557585 - Invader3_I LTR Gypsy -2541 2347 1515 8 634 3368 192 15 21 chrUextra 6447171 6448016 -22556640 - SAR_DM Satellite Satellite -487 840 1 8 634 535 296 43 47 chrUextra 6448122 6448195 -22556461 + GTWIN_I LTR Gypsy 2545 2662 -3759 8 634 1392 47 19 0 chrUextra 6448195 6448409 -22556247 + TLD2 Unknown Unknown 1 218 0 8 634 535 296 43 47 chrUextra 6448409 6448944 -22555712 + GTWIN_I LTR Gypsy 2663 3538 -2883 8 634 342 0 0 0 chrUextra 6449061 6449099 -22555557 + (CTCGG)n Simple_repeat Simple_repeat 1 38 0 8 634 1164 73 0 0 chrUextra 6449099 6449276 -22555380 + (TTCTC)n Simple_repeat Simple_repeat 2 178 0 8 634 212 171 0 0 chrUextra 6449673 6449714 -22554942 + (GTTTG)n Simple_repeat Simple_repeat 3 43 0 8 634 5937 73 4 1 chrUextra 6450006 6450851 -22553805 + TART LINE telomeric 295 1141 -13336 8 634 438 336 9 9 chrUextra 6451896 6452112 -22552544 + GTWIN_I LTR Gypsy 3323 3538 -2883 8 634 2792 204 18 25 chrUextra 6452853 6453686 -22550970 - SAR_DM Satellite Satellite -535 826 1 8 634 5407 6 0 0 chrUextra 6453786 6454417 -22550239 - FW_DM LINE Jockey -1083 3609 2979 8 634 1129 101 24 9 chrUextra 6454416 6454627 -22550029 + DMSAT6 Satellite Satellite 254 467 -3 8 634 6669 18 0 26 chrUextra 6454731 6455576 -22549080 + G_DM LINE Jockey 3093 3915 -431 8 634 1897 24 0 0 chrUextra 6455676 6455926 -22548730 - TART LINE telomeric -13598 879 630 8 634 3046 158 7 12 chrUextra 6455925 6456521 -22548135 - TAHRE LINE telomeric -12 10451 9859 8 634 6752 32 8 0 chrUextra 6456621 6457466 -22547190 - DMCR1A LINE CR1 -1674 2796 1945 8 634 3025 172 113 26 chrUextra 6457568 6458410 -22546246 - HETA LINE telomeric -211 5870 5063 8 634 1897 14 0 0 chrUextra 6459456 6459677 -22544979 + DMRT1B LINE R1 4963 5183 0 8 634 3799 11 32 0 chrUextra 6459839 6460301 -22544355 + DMRT1A LINE R1 3194 3670 -1513 8 634 6942 29 1 0 chrUextra 6460404 6461246 -22543410 - Gypsy12_I LTR Gypsy -2253 3293 2451 8 634 5619 26 0 7 chrUextra 6461346 6462050 -22542606 + FW_DM LINE Jockey 3994 4692 0 8 634 254 29 0 0 chrUextra 6462060 6462094 -22542562 - R1_DM LINE R1 -3966 1390 1357 8 634 659 32 21 11 chrUextra 6462094 6462189 -22542467 - R1_DM LINE R1 -4150 1206 1111 8 634 1609 5 40 0 chrUextra 6462290 6462488 -22542168 + R1_DM LINE R1 4861 5066 -290 8 634 924 44 0 0 chrUextra 6462485 6462599 -22542057 + R1_DM LINE R1 5243 5356 0 8 634 3685 60 8 4 chrUextra 6462632 6463134 -22541522 + R1_DM LINE R1 1 504 -4852 8 634 3708 177 7 15 chrUextra 6463234 6464078 -22540578 - SAR_DM Satellite Satellite -362 1110 274 8 634 189 0 0 0 chrUextra 6464722 6464743 -22539913 + (CTG)n Simple_repeat Simple_repeat 3 23 0 8 634 270 194 0 61 chrUextra 6464772 6464871 -22539785 - ROO_I LTR Pao -7523 733 641 8 634 3586 179 11 9 chrUextra 6465124 6465965 -22538691 - SAR_DM Satellite Satellite -417 1055 214 8 634 4431 6 21 0 chrUextra 6466066 6466593 -22538063 + TAHRE LINE telomeric 9915 10452 -11 8 634 1803 50 11 18 chrUextra 6466620 6466910 -22537746 + HETA LINE telomeric 1 243 -5838 8 634 3277 191 14 21 chrUextra 6467010 6467852 -22536804 + SAR_DM Satellite Satellite 1 835 -216 8 634 4130 194 18 0 chrUextra 6467958 6468798 -22535858 + ROVER-I_DM LTR Gypsy 3556 4410 -2174 8 634 4490 18 32 0 chrUextra 6469187 6469742 -22534914 + PROTOP_A DNA P 1 573 -532 8 634 1424 12 0 6 chrUextra 6469842 6470013 -22534643 - BATUMI_I LTR Pao -2924 5039 4870 8 634 3706 114 5 8 chrUextra 6470008 6470686 -22533970 - BATUMI_I LTR Pao -2879 5035 4281 8 634 2338 7 0 0 chrUextra 6470786 6471062 -22533594 - DM176_LTR LTR Gypsy -231 276 1 8 634 472 58 0 232 chrUextra 6471064 6471176 -22533480 + DNAREP1_DM LINE Penelope 500 585 -9 8 634 21 0 0 0 chrUextra 6471261 6471282 -22533374 + AT_rich Low_complexity Low_complexity 1 21 0 8 634 304 174 23 0 chrUextra 6471377 6471456 -22533200 - PROTOP_A DNA P -981 124 43 8 634 1548 11 0 0 chrUextra 6472676 6472854 -22531802 + (TTATA)n Simple_repeat Simple_repeat 3 180 0 8 634 1620 0 0 0 chrUextra 6472876 6473112 -22531544 + (TTATA)n Simple_repeat Simple_repeat 1 236 0 8 634 3552 2 0 0 chrUextra 6473112 6473518 -22531138 + ROO_LTR LTR Pao 2 407 -21 8 634 3071 21 8 0 chrUextra 6473618 6474004 -22530652 + ROO_I LTR Pao 3817 4205 -4051 8 634 3747 22 0 0 chrUextra 6474001 6474462 -22530194 - FW_DM LINE Jockey 0 4692 4232 8 634 7196 2 1 2 chrUextra 6474562 6475406 -22529250 - LSU-rRNA_Dme rRNA rRNA -2458 1442 600 8 634 1545 19 0 0 chrUextra 6475508 6475923 -22528733 + (TTATA)n Simple_repeat Simple_repeat 1 415 0 8 634 2286 4 0 0 chrUextra 6475925 6476201 -22528455 + Copia_LTR LTR Copia 1 276 0 8 634 232 0 0 0 chrUextra 6476201 6476235 -22528421 + Copia_LTR LTR Copia 243 276 0 8 634 627 67 67 0 chrUextra 6476235 6476339 -22528317 + Copia_I LTR Copia 1 111 -4482 8 634 981 74 0 0 chrUextra 6476450 6476598 -22528058 - ARS406_DM Unknown Unknown -177 176 29 8 634 2733 201 22 19 chrUextra 6476598 6477291 -22527365 + SAR_DM Satellite Satellite 1 695 -208 8 634 1752 18 9 0 chrUextra 6477394 6477615 -22527041 - MDG3_LTR LTR Gypsy -44 223 1 8 634 3448 9 93 0 chrUextra 6477615 6478058 -22526598 - QUASIMODO_LTR LTR Gypsy -174 484 1 8 634 1388 17 0 0 chrUextra 6478058 6478238 -22526418 - QUASIMODO_I LTR Gypsy 0 6060 5881 8 634 356 196 0 19 chrUextra 6478338 6478442 -22526214 + XDMR_DM Unknown Unknown 259 360 0 8 634 2981 168 31 45 chrUextra 6478356 6479160 -22525496 - SAR_DM Satellite Satellite -354 1118 326 8 634 6883 19 1 1 chrUextra 6479282 6480126 -22524530 - R1_DM LINE R1 -1137 4219 3376 8 634 1078 207 22 0 chrUextra 6480226 6480453 -22524203 - ROVER-I_DM LTR Gypsy -4161 2423 2192 8 634 575 75 65 0 chrUextra 6480510 6480603 -22524053 - ROVER-LTR_DM LTR Gypsy -268 99 1 8 634 418 98 158 0 chrUextra 6480603 6480679 -22523977 - DM412B_LTR LTR Gypsy -326 245 157 8 634 564 156 0 9 chrUextra 6480679 6480789 -22523867 - DM412 LTR Gypsy -3 6894 6786 8 634 2181 53 0 0 chrUextra 6480788 6481070 -22523586 + ROOA_I LTR Pao 1615 1896 -4953 8 634 1585 306 18 13 chrUextra 6481227 6481991 -22522665 + MICROPIA_I LTR Gypsy 2253 2970 -1506 8 634 6428 11 0 0 chrUextra 6482114 6482958 -22521698 + DMRT1B LINE R1 1120 2069 -3114 8 634 1165 14 0 0 chrUextra 6483058 6483199 -22521457 + TRANSPAC_I LTR Gypsy 4450 4590 0 8 634 2879 3 0 0 chrUextra 6483198 6483528 -22521128 + TRANSPAC_LTR LTR Gypsy 1 330 0 8 634 2988 16 3 3 chrUextra 6483528 6483902 -22520754 + STALKER4_I LTR Gypsy 1170 1543 -4987 8 634 5127 2 0 0 chrUextra 6484002 6484587 -22520069 - LSU-rRNA_Dme rRNA rRNA -676 3224 2640 8 634 519 0 0 16 chrUextra 6484585 6484649 -22520007 - R1_DM LINE R1 0 5356 5294 8 634 1760 5 0 5 chrUextra 6484641 6484846 -22519810 - LSU-rRNA_Dme rRNA rRNA -1252 2648 2445 8 634 1343 12 0 6 chrUextra 6484946 6485110 -22519546 + STALKER4_LTR LTR Gypsy 240 402 0 8 634 5014 38 35 1 chrUextra 6485137 6485790 -22518866 - R1_DM LINE R1 -3787 1569 895 8 634 3417 187 14 18 chrUextra 6485890 6486734 -22517922 + SAR_DM Satellite Satellite 375 1215 -257 8 634 1772 0 5 0 chrUextra 6487778 6487987 -22516669 - STALKER4_LTR LTR Gypsy -192 210 1 8 634 1200 130 0 0 chrUextra 6487987 6488186 -22516470 + ROVER-I_DM LTR Gypsy 5110 5308 -1276 8 634 676 218 0 11 chrUextra 6488221 6488397 -22516259 + ROVER-I_DM LTR Gypsy 5990 6163 -421 8 634 3515 17 0 0 chrUextra 6488722 6489143 -22515513 - PROTOP_A DNA P -684 421 1 8 634 1379 51 10 5 chrUextra 6489143 6489340 -22515316 + TART_B1 LINE telomeric 3431 3628 -7026 8 634 1480 83 0 48 chrUextra 6489338 6489565 -22515091 + TART_B1 LINE telomeric 4415 4630 -6024 8 634 3762 171 7 11 chrUextra 6489672 6490510 -22514146 + SAR_DM Satellite Satellite 195 1029 -443 8 634 2113 98 34 11 chrUextra 6490610 6490961 -22513695 + MDG1_I LTR Gypsy 3 361 -6235 8 634 2948 68 18 7 chrUextra 6490958 6491416 -22513240 + MDG1_I LTR Gypsy 672 1134 -5462 8 634 3198 5 0 5 chrUextra 6491555 6491951 -22512705 + DOC LINE Jockey 4332 4725 0 8 634 1778 252 0 0 chrUextra 6491974 6492398 -22512258 + Gypsy6_I LTR Gypsy 2931 3354 -3658 8 634 7197 0 0 0 chrUextra 6492498 6493342 -22511314 - TAHRE LINE telomeric -2482 7981 7138 8 634 3436 185 9 11 chrUextra 6493443 6494257 -22510399 - SAR_DM Satellite Satellite -466 1006 195 8 634 703 124 0 0 chrUextra 6494164 6494285 -22510371 + ARS406_DM Unknown Unknown 1 121 -232 8 634 6912 19 17 0 chrUextra 6494385 6495228 -22509428 + FW_DM LINE Jockey 343 1199 -3493 8 634 2658 73 25 24 chrUextra 6495328 6496171 -22508485 - DMSAT6 Satellite Satellite -117 844 1 8 634 6661 31 19 1 chrUextra 6496271 6497114 -22507542 - R1_DM LINE R1 -1903 3453 2596 8 634 5194 24 43 0 chrUextra 6497214 6498057 -22506599 + PROTOP_A DNA P 50 928 -177 8 634 380 324 25 33 chrUextra 6498473 6498829 -22505827 - BURDOCK_I LTR Gypsy -4868 992 856 8 634 1489 6 0 0 chrUextra 6498829 6499000 -22505656 - PROTOP DNA P 0 4480 4310 8 634 6943 19 1 5 chrUextra 6499103 6499943 -22504713 - R1_DM LINE R1 -608 4748 3912 8 634 5016 33 42 10 chrUextra 6500043 6500718 -22503938 - ROO_I LTR Pao -3368 4888 4193 8 634 1342 13 0 0 chrUextra 6500727 6500886 -22503770 + FW_DM LINE Jockey 1750 1908 -2784 8 634 258 81 0 0 chrUextra 6501479 6501516 -22503140 + (TC)n Simple_repeat Simple_repeat 1 37 0 8 634 4385 48 109 5 chrUextra 6501930 6502772 -22501884 + R1_DM LINE R1 625 1554 -3802 8 634 7384 1 0 0 chrUextra 6502872 6503715 -22500941 + MAX_I LTR Pao 6100 6942 -972 8 634 5880 95 0 2 chrUextra 6503824 6504658 -22499998 + Gypsy12_I LTR Gypsy 2487 3318 -2228 8 634 1512 38 61 5 chrUextra 6504758 6504971 -22499685 + DIVER2_I LTR Pao 2218 2442 -1705 8 634 2243 187 6 9 chrUextra 6505701 6506225 -22498431 - SAR_DM Satellite Satellite -455 1017 496 8 634 1489 161 3 7 chrUextra 6506240 6506541 -22498115 - SAR_DM Satellite Satellite -569 903 604 8 634 6857 14 11 0 chrUextra 6506644 6507487 -22497169 + R1_DM LINE R1 260 1111 -4245 8 634 6324 45 7 12 chrUextra 6507587 6508427 -22496229 - DMCR1A LINE CR1 -1499 2971 2136 8 634 5659 25 63 1 chrUextra 6508530 6509373 -22495283 + R1_DM LINE R1 3755 4649 -707 8 634 1534 19 23 18 chrUextra 6509473 6509693 -22494963 + NTS_DM Other Other 20 240 0 8 634 1755 17 17 17 chrUextra 6509693 6509933 -22494723 + NTS_DM Other Other 1 240 0 8 634 1861 0 17 13 chrUextra 6509933 6510172 -22494484 + NTS_DM Other Other 1 240 0 8 634 1180 14 0 0 chrUextra 6510172 6510316 -22494340 + NTS_DM Other Other 1 144 -96 8 634 247 195 207 0 chrUextra 6510451 6510533 -22494123 - XDMR_DM Unknown Unknown -7 353 255 8 634 1010 171 27 12 chrUextra 6510482 6511045 -22493611 + SAR_DM Satellite Satellite 1 570 -1040 8 634 830 174 35 10 chrUextra 6511056 6511259 -22493397 + SAR_DM Satellite Satellite 539 746 -726 8 634 6858 21 4 6 chrUextra 6511359 6512202 -22492454 - DM1731_I LTR Copia -91 3885 3045 8 634 3169 198 11 15 chrUextra 6512302 6513136 -22491520 + SAR_DM Satellite Satellite 1 830 -208 8 634 3498 185 18 24 chrUextra 6513246 6514079 -22490577 - SAR_DM Satellite Satellite -514 828 1 8 634 2680 54 0 0 chrUextra 6514188 6514538 -22490118 + DIVER_I LTR Pao 3309 3658 -1985 8 634 4152 20 0 0 chrUextra 6514535 6515031 -22489625 + DIVER_I LTR Pao 3797 4292 -1351 8 634 1349 0 0 0 chrUextra 6515131 6515291 -22489365 + DM176_I LTR Gypsy 6261 6420 0 8 634 4282 8 0 0 chrUextra 6515291 6515798 -22488858 + DM176_LTR LTR Gypsy 1 507 0 8 634 1510 16 6 0 chrUextra 6515798 6515972 -22488684 + LSU-rRNA_Dme rRNA rRNA 917 1091 -2809 8 634 3035 196 70 70 chrUextra 6517017 6517852 -22486804 + Gypsy3_I LTR Gypsy 137 971 -5206 8 634 1788 74 123 3 chrUextra 6518271 6518556 -22486100 - TART LINE telomeric -6877 7600 7282 8 634 268 0 0 0 chrUextra 6518557 6518588 -22486068 + NINJA_LTR LTR Pao 1 31 -286 8 634 1637 33 56 0 chrUextra 6518588 6518801 -22485855 - PROTOP_B DNA P 0 1153 929 8 634 3381 180 14 12 chrUextra 6519843 6520649 -22484007 - SAR_DM Satellite Satellite -471 1001 195 8 634 779 108 0 0 chrUextra 6520556 6520685 -22483971 + ARS406_DM Unknown Unknown 1 129 -224 8 634 26 30 0 0 chrUextra 6520837 6520870 -22483786 + AT_rich Low_complexity Low_complexity 1 33 0 8 634 21 89 0 0 chrUextra 6521007 6521063 -22483593 + AT_rich Low_complexity Low_complexity 1 56 0 8 634 2963 9 0 0 chrUextra 6521757 6522102 -22482554 + BS LINE Jockey 4782 5126 0 8 634 47 0 0 0 chrUextra 6522488 6522535 -22482121 + AT_rich Low_complexity Low_complexity 1 47 0 8 634 2457 172 30 100 chrUextra 6522743 6523511 -22481145 + Gypsy12A_LTR LTR Gypsy 1443 2156 -124 8 634 2405 117 16 9 chrUextra 6523613 6524427 -22480229 - DMSAT6 Satellite Satellite -90 820 1 8 634 3222 180 25 20 chrUextra 6524553 6525395 -22479261 - SAR_DM Satellite Satellite -1033 846 1 8 634 3875 28 0 4 chrUextra 6525495 6525992 -22478664 + CIRCE LINE Composite 4486 4980 -1376 8 634 872 104 14 7 chrUextra 6526190 6526335 -22478321 - Gypsy9_I LTR Gypsy -2778 1899 1754 8 634 5686 93 5 12 chrUextra 6526438 6527279 -22477377 + Gypsy12_I LTR Gypsy 1690 2524 -3022 8 634 1547 95 0 0 chrUextra 6527789 6528011 -22476645 + Gypsy12_I LTR Gypsy 2449 2670 -2876 8 634 1362 117 0 23 chrUextra 6528002 6528221 -22476435 + Gypsy12_I LTR Gypsy 2811 3024 -2522 8 634 2903 39 166 12 chrUextra 6528321 6528917 -22475739 + PROTOP_B DNA P 6 694 -459 8 634 21 0 0 0 chrUextra 6529093 6529114 -22475542 + AT_rich Low_complexity Low_complexity 1 21 0 8 634 4785 69 80 21 chrUextra 6529263 6530105 -22474551 + STALKER4_I LTR Gypsy 712 1602 -4928 8 634 1349 40 6 0 chrUextra 6530205 6530379 -22474277 + R1_DM LINE R1 1619 1793 -3563 8 634 1946 158 25 40 chrUextra 6530380 6530782 -22473874 + R1_DM LINE R1 310 705 -4651 8 634 1753 117 4 4 chrUextra 6530782 6531047 -22473609 + R1_DM LINE R1 1099 1363 -3993 8 634 2172 0 48 0 chrUextra 6531147 6531417 -22473239 - ROO_I LTR Pao -1236 7020 6738 8 634 4844 0 0 3 chrUextra 6531417 6531989 -22472667 - ROO_I LTR Pao -2320 5936 5367 8 634 6919 13 7 0 chrUextra 6532089 6532931 -22471725 + G_DM LINE Jockey 2250 3097 -1249 8 634 3348 128 18 25 chrUextra 6533031 6533741 -22470915 + MDG1_I LTR Gypsy 5736 6799 -98 8 634 1035 39 0 0 chrUextra 6533745 6533873 -22470783 + (TAA)n Simple_repeat Simple_repeat 3 130 0 8 634 4980 89 9 7 chrUextra 6534001 6534815 -22469841 + G2_DM LINE Jockey 4 664 -2438 8 634 828 147 0 0 chrUextra 6534915 6535065 -22469591 + SAR_DM Satellite Satellite 523 672 -800 8 634 324 321 0 0 chrUextra 6534968 6535105 -22469551 - XDMR Unknown Unknown -222 139 3 8 634 2519 178 22 18 chrUextra 6535127 6535757 -22468899 + SAR_DM Satellite Satellite 191 823 -649 8 634 679 121 0 160 chrUextra 6535861 6536048 -22468608 + DIVER_LTR LTR Pao 68 224 0 8 634 241 174 70 102 chrUextra 6536450 6536578 -22468078 - BS LINE Jockey -4967 159 36 8 634 455 113 0 0 chrUextra 6536581 6536652 -22468004 + DMCR1A LINE CR1 2526 2596 -1874 8 634 6623 26 33 5 chrUextra 6537741 6538583 -22466073 - FW_DM LINE Jockey -1695 2997 2132 8 634 2369 115 25 11 chrUextra 6538683 6539525 -22465131 - DMSAT6 Satellite Satellite -91 853 1 8 634 1726 0 0 0 chrUextra 6539625 6539824 -22464832 - R1_DM LINE R1 -356 5000 4802 8 634 5647 2 0 0 chrUextra 6539822 6540467 -22464189 - LSU-rRNA_Dme rRNA rRNA -1245 2655 2011 8 634 1414 77 68 5 chrUextra 6540567 6540788 -22463868 + DMCR1A LINE CR1 1950 2184 -2286 8 634 334 103 0 0 chrUextra 6540788 6540846 -22463810 + DMCR1A LINE CR1 2317 2374 -2096 8 634 1357 74 139 0 chrUextra 6540851 6541067 -22463589 + DMCR1A LINE CR1 3066 3311 -1159 8 634 1232 63 132 0 chrUextra 6541086 6541276 -22463380 + DMCR1A LINE CR1 3828 4042 -428 8 634 21 71 0 0 chrUextra 6541350 6541392 -22463264 + AT_rich Low_complexity Low_complexity 1 42 0 8 634 2666 189 90 27 chrUextra 6541526 6542314 -22462342 + SAR_DM Satellite Satellite 370 1207 -265 8 634 490 229 45 35 chrUextra 6542150 6542349 -22462307 - XDMR_DM Unknown Unknown -7 353 153 8 634 320 161 10 147 chrUextra 6542461 6542563 -22462093 - DNAREP1_DM LINE Penelope -6 588 501 8 634 1085 50 12 6 chrUextra 6542567 6542729 -22461927 + S2_DM DNA Tc1 1 163 -1572 8 634 314 173 0 58 chrUextra 6542755 6542841 -22461815 - DNAREP1_DM LINE Penelope -26 568 488 8 634 240 175 117 58 chrUextra 6542964 6543067 -22461589 - Gypsy2_LTR LTR Gypsy -150 203 95 8 634 492 269 0 125 chrUextra 6543081 6543289 -22461367 - Gypsy2_I LTR Gypsy -91 6044 5863 8 634 246 150 0 0 chrUextra 6543455 6543495 -22461161 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 634 246 150 0 0 chrUextra 6543547 6543587 -22461069 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 634 255 125 0 0 chrUextra 6543630 6543670 -22460986 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 634 22 56 0 0 chrUextra 6543683 6543719 -22460937 + AT_rich Low_complexity Low_complexity 1 36 0 8 634 4302 4 0 0 chrUextra 6543728 6544232 -22460424 + G6_DM LINE Jockey 576 1079 -963 8 634 26 30 0 0 chrUextra 6544584 6544617 -22460039 + AT_rich Low_complexity Low_complexity 1 33 0 8 634 1614 36 0 0 chrUextra 6544976 6545171 -22459485 - PROTOP DNA P 0 4480 4286 8 634 21 57 0 0 chrUextra 6545324 6545359 -22459297 + AT_rich Low_complexity Low_complexity 1 35 0 8 634 246 262 10 10 chrUextra 6545705 6545809 -22458847 - TV1I LTR Gypsy -818 5145 5042 8 634 1521 40 0 17 chrUextra 6546215 6547055 -22457601 + (CTATT)n Simple_repeat Simple_repeat 1 825 0 8 634 3295 202 11 21 chrUextra 6547155 6547996 -22456660 + SAR_DM Satellite Satellite 1 832 -227 8 634 1062 0 0 0 chrUextra 6548819 6548937 -22455719 + (TTCTC)n Simple_repeat Simple_repeat 4 121 0 8 634 2669 154 100 100 chrUextra 6549037 6549878 -22454778 - CIRCE LINE Composite -4138 2218 1378 8 634 1620 5 0 0 chrUextra 6550203 6550580 -22454076 + (CAAGA)n Simple_repeat Simple_repeat 1 377 0 8 634 1602 213 90 24 chrUextra 6550922 6551760 -22452896 + SAR_DM Satellite Satellite 1 893 -216 8 634 1876 63 4 4 chrUextra 6552801 6553054 -22451602 + ROOA_I LTR Pao 3064 3316 -3533 8 79 5002 5 0 0 chrUextra 6553052 6553642 -22451014 - FW_DM LINE Jockey -1 4691 4102 8 635 263 160 113 0 chrUextra 6553742 6553848 -22450808 + (TTATA)n Simple_repeat Simple_repeat 5 122 0 8 635 25 31 0 0 chrUextra 6554028 6554060 -22450596 + AT_rich Low_complexity Low_complexity 1 32 0 8 635 369 0 0 0 chrUextra 6555016 6555061 -22449595 + Copia2_LTR_DM LTR Copia 154 198 0 8 635 3816 11 0 7 chrUextra 6555061 6555524 -22449132 + Copia2_I LTR Copia 1 460 -3702 8 635 3243 178 19 22 chrUextra 6556579 6557406 -22447250 + SAR_DM Satellite Satellite 326 1150 -322 8 635 4250 32 0 26 chrUextra 6557801 6558347 -22446309 - Baggins1 LINE LOA 0 5453 4922 8 635 3183 187 18 27 chrUextra 6558448 6559268 -22445388 + SAR_DM Satellite Satellite 352 1164 -308 8 635 3290 22 2 2 chrUextra 6559389 6559796 -22444860 - NINJA_I LTR Pao -827 5184 4778 8 635 1373 27 176 0 chrUextra 6559804 6559992 -22444664 - NINJA_I LTR Pao -1498 4513 4293 8 635 426 55 0 0 chrUextra 6559999 6560054 -22444602 - NINJA_I LTR Pao -2279 3732 3678 8 635 25 31 0 0 chrUextra 6560097 6560129 -22444527 + AT_rich Low_complexity Low_complexity 1 32 0 8 635 6722 32 0 1 chrUextra 6560329 6561170 -22443486 - R1_DM LINE R1 -2215 3141 2302 8 635 6158 64 2 4 chrUextra 6561270 6562111 -22442545 + R1_DM LINE R1 4 843 -4513 8 635 1042 39 65 0 chrUextra 6562482 6562636 -22442020 - PROTOP DNA P -1246 3234 3071 8 635 2455 88 0 0 chrUextra 6562639 6562992 -22441664 - PROTOP DNA P -1512 2968 2616 8 635 220 141 46 15 chrUextra 6563596 6563661 -22440995 + (TTA)n Simple_repeat Simple_repeat 2 68 0 8 635 22 35 0 0 chrUextra 6563948 6563977 -22440679 + AT_rich Low_complexity Low_complexity 1 29 0 8 635 2739 225 14 11 chrUextra 6564108 6564934 -22439722 - SAR_DM Satellite Satellite -396 1076 248 8 635 3314 186 16 20 chrUextra 6565034 6565872 -22438784 + SAR_DM Satellite Satellite 348 1181 -291 8 635 4043 15 0 0 chrUextra 6565975 6566452 -22438204 + FW_DM LINE Jockey 3856 4332 -360 8 635 2942 30 0 0 chrUextra 6566452 6566816 -22437840 - G5_DM LINE Jockey -1710 3146 2783 8 635 320 238 0 10 chrUextra 6566916 6567018 -22437638 + XDMR_DM Unknown Unknown 260 360 0 8 635 3233 191 14 22 chrUextra 6566932 6567757 -22436899 - SAR_DM Satellite Satellite -353 1119 301 8 635 3523 171 24 21 chrUextra 6567857 6568695 -22435961 - SAR_DM Satellite Satellite -264 1208 369 8 635 416 55 0 0 chrUextra 6568798 6568853 -22435803 - DM1731_LTR LTR Copia -119 217 163 8 635 6148 16 29 1 chrUextra 6568870 6569639 -22435017 - G6_DM LINE Jockey 0 2042 1253 8 635 668 174 72 45 chrUextra 6569761 6569984 -22434672 - Gypsy12_LTR LTR Gypsy -778 1558 1330 8 635 4090 49 8 40 chrUextra 6569988 6570580 -22434076 + DIVER2_I LTR Pao 1429 2001 -2146 8 635 1234 0 0 0 chrUextra 6570680 6570822 -22433834 + Copia_I LTR Copia 4452 4593 0 8 635 2286 4 0 0 chrUextra 6570822 6571098 -22433558 + Copia_LTR LTR Copia 1 276 0 8 635 3560 2 0 0 chrUextra 6571098 6571521 -22433135 - Copia_I LTR Copia -2805 1788 1366 8 635 1416 29 0 0 chrUextra 6571621 6571865 -22432791 + (CTATT)n Simple_repeat Simple_repeat 1 244 0 8 635 1587 46 0 2 chrUextra 6571880 6572460 -22432196 + (CTATT)n Simple_repeat Simple_repeat 1 579 0 8 635 6871 16 4 0 chrUextra 6572562 6573402 -22431254 - STALKER4_I LTR Gypsy -3616 2914 2072 8 635 776 0 0 0 chrUextra 6573502 6573596 -22431060 - Copia_LTR LTR Copia -182 94 1 8 635 2377 4 0 0 chrUextra 6573596 6573873 -22430783 - Copia_I LTR Copia 0 4593 4317 8 635 3949 0 0 0 chrUextra 6573873 6574342 -22430314 - Copia_I LTR Copia -2805 1788 1320 8 635 6985 17 4 1 chrUextra 6574442 6575282 -22429374 - DMRT1A LINE R1 -2689 2494 1653 8 635 3522 179 18 12 chrUextra 6575383 6576214 -22428442 - SAR_DM Satellite Satellite -439 1033 198 8 635 1895 68 21 0 chrUextra 6576322 6576603 -22428053 - QUASIMODO_I LTR Gypsy -1525 4535 4249 8 635 2179 138 10 25 chrUextra 6576760 6577162 -22427494 - GTWIN_LTR LTR Gypsy -93 402 7 8 635 1225 198 30 6 chrUextra 6577282 6577612 -22427044 - SAR_DM Satellite Satellite -678 794 457 8 635 1413 110 100 152 chrUextra 6577621 6578102 -22426554 + FB4_DM DNA Tc1 173 628 -3461 8 635 4014 0 0 0 chrUextra 6578202 6578657 -22425999 - TABOR_LTR LTR Gypsy -51 455 1 8 635 1798 170 13 5 chrUextra 6578657 6579042 -22425614 - SAR_DM Satellite Satellite -651 821 434 8 635 6144 49 0 13 chrUextra 6579142 6579982 -22424674 - STALKER4_I LTR Gypsy -2665 3865 3037 8 635 3107 178 20 21 chrUextra 6580087 6580922 -22423734 + SAR_DM Satellite Satellite 1 833 -396 8 635 32 57 0 0 chrUextra 6581077 6581130 -22423526 + AT_rich Low_complexity Low_complexity 1 53 0 8 635 4396 58 2 3 chrUextra 6581290 6581862 -22422794 - BS2 LINE Jockey -678 4043 3473 8 635 3190 187 16 17 chrUextra 6581962 6582802 -22421854 + SAR_DM Satellite Satellite 1 838 -216 8 635 5810 85 32 11 chrUextra 6582902 6583742 -22420914 + Gypsy12_I LTR Gypsy 4677 5534 -12 8 635 6793 23 2 8 chrUextra 6583842 6584682 -22419974 + R1_DM LINE R1 4447 5281 -75 8 635 3286 190 14 24 chrUextra 6584787 6585621 -22419035 + SAR_DM Satellite Satellite 1 825 -216 8 635 6843 14 0 1 chrUextra 6585724 6586562 -22418094 + STALKER4_I LTR Gypsy 1249 2085 -4445 8 635 3361 184 12 11 chrUextra 6586662 6587468 -22417188 - SAR_DM Satellite Satellite -471 1001 195 8 635 782 102 0 0 chrUextra 6587375 6587502 -22417154 + ARS406_DM Unknown Unknown 1 127 -226 8 635 6964 5 11 6 chrUextra 6587602 6588442 -22416214 - G2_DM LINE Jockey -1371 1731 888 8 635 1780 5 5 0 chrUextra 6588544 6588754 -22415902 - DM1731_I LTR Copia -3765 211 1 8 635 2678 39 0 0 chrUextra 6588754 6589090 -22415566 - DM1731_LTR LTR Copia 0 336 1 8 635 2139 120 6 32 chrUextra 6589482 6590321 -22414335 + DMSAT6 Satellite Satellite 1 816 -96 8 635 4281 4 2 2 chrUextra 6590422 6590925 -22413731 + QUASIMODO_LTR LTR Gypsy 156 658 0 8 635 678 76 0 112 chrUextra 6590925 6591056 -22413600 + CIRCE LINE Composite 4369 4484 -1872 8 635 904 179 25 30 chrUextra 6591059 6591261 -22413395 - DM412 LTR Gypsy -566 6331 6131 8 635 4735 28 5 0 chrUextra 6592302 6592884 -22411772 + ACCORD2_I LTR Gypsy 500 1084 -6128 8 635 1989 12 4 4 chrUextra 6592884 6593129 -22411527 - MICROPIA_LTR LTR Gypsy 0 476 232 8 635 1480 211 3 0 chrUextra 6593242 6593565 -22411091 - G_DM LINE Jockey -3109 1237 914 8 635 1304 53 0 0 chrUextra 6593582 6593751 -22410905 + G2_DM LINE Jockey 2751 2919 -183 8 635 855 108 88 0 chrUextra 6593748 6593896 -22410760 - G2_DM LINE Jockey -415 2687 2527 8 635 1124 49 0 0 chrUextra 6593892 6594055 -22410601 + G2_DM LINE Jockey 2934 3096 -6 8 635 1570 62 87 45 chrUextra 6594182 6594346 -22410310 + MAX_I LTR Pao 126 278 -7636 8 635 249 33 0 0 chrUextra 6594346 6594376 -22410280 + (TA)n Simple_repeat Simple_repeat 2 31 0 8 635 1570 75 96 37 chrUextra 6594376 6594526 -22410130 + MAX_I LTR Pao 279 499 -7415 8 635 6121 63 13 4 chrUextra 6595122 6595962 -22408694 - R1_DM LINE R1 -4495 861 14 8 635 6980 1 17 0 chrUextra 6596062 6596902 -22407754 - STALKER4_I LTR Gypsy -392 6138 5285 8 635 2249 11 0 0 chrUextra 6597002 6597268 -22407388 - DM176_I LTR Gypsy -1858 4562 4297 8 635 4895 0 0 0 chrUextra 6597266 6597842 -22406814 - DM176_I LTR Gypsy -2741 3679 3104 8 635 3137 185 64 14 chrUextra 6597942 6598781 -22405875 + SAR_DM Satellite Satellite 384 1264 -208 8 635 294 24 24 0 chrUextra 6598887 6598928 -22405728 + BATUMI_I LTR Pao 7922 7963 0 8 635 1284 111 37 29 chrUextra 6598950 6599192 -22405464 + BATUMI_LTR LTR Pao 29 272 0 8 635 230 254 0 0 chrUextra 6599192 6599259 -22405397 - Copia_I LTR Copia -373 4220 4154 8 635 291 233 128 0 chrUextra 6599301 6599387 -22405269 - Copia_I LTR Copia -494 4099 4003 8 635 252 196 0 0 chrUextra 6599400 6599456 -22405200 - Copia_I LTR Copia -932 3661 3606 8 635 2052 4 0 0 chrUextra 6599468 6599722 -22404934 - DOC LINE Jockey 0 4725 4472 8 635 6885 27 2 0 chrUextra 6599822 6600662 -22403994 + R1_DM LINE R1 1318 2159 -3197 8 635 5820 44 154 6 chrUextra 6600763 6601602 -22403054 + R1_DM LINE R1 345 1308 -4048 8 635 815 11 0 0 chrUextra 6601702 6601797 -22402859 - NTS_DM Other Other -145 95 1 8 635 1428 20 20 20 chrUextra 6601797 6602000 -22402656 - NTS_DM Other Other 0 240 38 8 635 870 9 0 27 chrUextra 6602000 6602112 -22402544 - NTS_DM Other Other -107 133 25 8 635 21 57 0 0 chrUextra 6602138 6602173 -22402483 + AT_rich Low_complexity Low_complexity 1 35 0 8 635 1252 18 0 6 chrUextra 6602173 6602338 -22402318 - NTS_DM Other Other -39 201 38 8 635 870 9 0 27 chrUextra 6602338 6602450 -22402206 - NTS_DM Other Other -107 133 25 8 635 307 25 0 0 chrUextra 6602502 6602542 -22402114 - NTS_DM Other Other -39 201 162 8 635 997 95 0 0 chrUextra 6602642 6602800 -22401856 + ARS406_DM Unknown Unknown 1 158 -195 8 635 3025 181 6 6 chrUextra 6602807 6603481 -22401175 - SAR_DM Satellite Satellite -569 903 230 8 635 7117 1 0 0 chrUextra 6603582 6604421 -22400235 + ROVER-I_DM LTR Gypsy 3446 4284 -2300 8 635 3070 3 6 0 chrUextra 6604522 6604879 -22399777 + LSU-rRNA_Dme rRNA rRNA 2289 2647 -1253 8 635 4017 4 2 6 chrUextra 6604878 6605362 -22399294 + R1_DM LINE R1 3472 3953 -1403 8 635 2139 189 20 8 chrUextra 6605462 6606293 -22398363 - SAR_DM Satellite Satellite -690 840 1 8 635 266 262 12 0 chrUextra 6606218 6606302 -22398354 + XDMR_DM Unknown Unknown 6 90 -270 8 635 2619 67 8 3 chrUextra 6606405 6606767 -22397889 + Gypsy10_LTR LTR Gypsy 1 364 0 8 635 372 156 0 13 chrUextra 6606767 6606841 -22397815 + MDG1_LTR LTR Gypsy 344 416 -26 8 635 415 357 10 10 chrUextra 6606842 6607154 -22397502 + Gypsy10_I LTR Gypsy 1741 2266 -3012 8 635 25 65 0 0 chrUextra 6607981 6608027 -22396629 + AT_rich Low_complexity Low_complexity 1 46 0 8 635 3020 194 14 16 chrUextra 6608282 6609121 -22395535 - SAR_DM Satellite Satellite -553 837 1 8 635 3425 178 17 25 chrUextra 6609224 6610060 -22394596 - SAR_DM Satellite Satellite -216 1256 428 8 635 4128 9 6 0 chrUextra 6610160 6610685 -22393971 + ROVER-I_DM LTR Gypsy 6057 6584 0 8 635 2230 15 3 36 chrUextra 6610685 6610999 -22393657 + ROVER-LTR_DM LTR Gypsy 1 366 -1 8 635 2816 9 0 0 chrUextra 6611099 6611428 -22393228 - STALKER4_LTR LTR Gypsy -73 329 1 8 635 3646 18 61 0 chrUextra 6611428 6611938 -22392718 - STALKER4_I LTR Gypsy 0 6530 5990 8 635 2904 189 35 25 chrUextra 6612038 6612838 -22391818 + SAR_DM Satellite Satellite 269 1076 -396 8 635 24 0 0 0 chrUextra 6613211 6613235 -22391421 + AT_rich Low_complexity Low_complexity 1 24 0 8 635 1363 101 282 0 chrUextra 6613537 6613815 -22390841 - DMRT1B LINE R1 -340 4843 4487 8 635 2370 98 32 24 chrUextra 6613916 6614755 -22389901 - DMSAT6 Satellite Satellite -91 846 1 8 635 4601 2 0 0 chrUextra 6614855 6615382 -22389274 + LSU-rRNA_Dme rRNA rRNA 2055 2581 -1319 8 635 2731 0 0 0 chrUextra 6615384 6615694 -22388962 - R2_DM LINE R2 -938 2669 2360 8 635 5731 57 49 13 chrUextra 6615794 6616633 -22388023 + R1_DM LINE R1 148 1016 -4340 8 635 1095 215 152 70 chrUextra 6616739 6617572 -22387084 - Gypsy12_I LTR Gypsy -4612 934 34 8 635 6868 13 20 16 chrUextra 6618611 6619450 -22385206 - Gypsy6_I LTR Gypsy -1211 5801 4959 8 635 3021 0 0 0 chrUextra 6619550 6619895 -22384761 + R2_DM LINE R2 3263 3607 0 8 635 651 26 0 0 chrUextra 6619894 6619971 -22384685 + LSU-rRNA_Dme rRNA rRNA 2578 2654 -1246 8 635 3357 0 5 0 chrUextra 6620000 6620389 -22384267 + R1_DM LINE R1 1 391 -4965 8 635 1325 138 194 21 chrUextra 6620489 6620777 -22383879 + DMRT1B LINE R1 4828 5165 -18 8 635 30 27 0 0 chrUextra 6621428 6621465 -22383191 + AT_rich Low_complexity Low_complexity 1 37 0 8 635 3897 37 116 0 chrUextra 6621465 6622010 -22382646 - PROTOP_A DNA P -497 608 1 8 635 966 41 0 0 chrUextra 6622010 6622131 -22382525 - DMCR1A LINE CR1 -2825 1645 1525 8 635 690 31 10 0 chrUextra 6622126 6622222 -22382434 - PROTOP_A DNA P -641 464 368 8 635 237 33 0 0 chrUextra 6622237 6622267 -22382389 + (TCTCC)n Simple_repeat Simple_repeat 1 30 0 8 635 1110 146 129 47 chrUextra 6622495 6622796 -22381860 - DNAREP1_DM LINE Penelope -201 393 83 8 635 489 33 0 0 chrUextra 6622885 6622946 -22381710 - DNAREP1_DM LINE Penelope -532 62 2 8 635 338 180 70 28 chrUextra 6624281 6624424 -22380232 + (AGATG)n Simple_repeat Simple_repeat 3 151 0 8 635 580 6 0 139 chrUextra 6624434 6624853 -22379803 + (GA)n Simple_repeat Simple_repeat 1 360 0 8 635 298 62 0 138 chrUextra 6624896 6625084 -22379572 + GA-rich Low_complexity Low_complexity 1 162 0 8 635 441 0 0 0 chrUextra 6625974 6626023 -22378633 + (TTGTG)n Simple_repeat Simple_repeat 1 49 0 8 635 2824 6 0 0 chrUextra 6626123 6626448 -22378208 + DIVER_I LTR Pao 5319 5643 0 8 635 1927 5 0 0 chrUextra 6626448 6626672 -22377984 + DIVER_LTR LTR Pao 1 224 0 8 635 404 39 0 0 chrUextra 6626692 6626743 -22377913 - CIRCE LINE Composite -4878 1478 1428 8 635 641 92 20 10 chrUextra 6626743 6626842 -22377814 + STALKER4_LTR LTR Gypsy 280 379 -23 8 635 3531 170 17 14 chrUextra 6627062 6627892 -22376764 - SAR_DM Satellite Satellite -446 1026 195 8 635 1308 21 21 21 chrUextra 6628001 6628193 -22376463 - NTS_DM Other Other -11 229 38 8 635 817 0 0 0 chrUextra 6628193 6628289 -22376367 - NTS_DM Other Other -107 133 38 8 635 832 9 9 27 chrUextra 6628289 6628400 -22376256 - NTS_DM Other Other -107 133 25 8 635 21 57 0 0 chrUextra 6628426 6628461 -22376195 + AT_rich Low_complexity Low_complexity 1 35 0 8 635 1234 24 0 6 chrUextra 6628461 6628626 -22376030 - NTS_DM Other Other -39 201 38 8 635 870 9 0 27 chrUextra 6628626 6628738 -22375918 - NTS_DM Other Other -107 133 25 8 635 22 56 0 0 chrUextra 6628764 6628800 -22375856 + AT_rich Low_complexity Low_complexity 1 36 0 8 635 3325 0 0 0 chrUextra 6628940 6629317 -22375339 - ROO_LTR LTR Pao -51 377 1 8 635 2655 85 11 10 chrUextra 6629879 6630712 -22373944 + DMSAT6 Satellite Satellite 1 833 -40 8 635 3496 168 26 9 chrUextra 6630849 6631654 -22373002 - SAR_DM Satellite Satellite -361 1111 293 8 635 2709 0 0 0 chrUextra 6631757 6632074 -22372582 - ACCORD_LTR LTR Gypsy -241 317 1 8 635 3959 45 13 9 chrUextra 6632074 6632596 -22372060 - R1_DM LINE R1 -2231 3125 2602 8 635 7034 7 34 0 chrUextra 6632699 6633535 -22371121 + DOC2_DM LINE Jockey 3569 4432 -361 8 635 2505 170 13 8 chrUextra 6634574 6635413 -22369243 + SAR_DM Satellite Satellite 1 843 -536 8 635 22 0 0 0 chrUextra 6635708 6635730 -22368926 + AT_rich Low_complexity Low_complexity 1 22 0 8 635 3209 170 35 23 chrUextra 6636455 6637267 -22367389 + SAR_DM Satellite Satellite 293 1113 -359 8 635 318 188 9 47 chrUextra 6637185 6637291 -22367365 - XDMR_DM Unknown Unknown 0 360 259 8 635 2741 0 0 0 chrUextra 6637391 6637702 -22366954 - HOBO DNA hAT -2705 311 1 8 635 36 53 0 0 chrUextra 6637876 6637933 -22366723 + AT_rich Low_complexity Low_complexity 1 57 0 8 635 2153 0 0 0 chrUextra 6637974 6638220 -22366436 - HOBO DNA hAT 0 3016 2771 8 635 1972 130 21 9 chrUextra 6638330 6638663 -22365993 - HETA LINE telomeric -3184 2897 2561 8 635 1376 236 11 8 chrUextra 6638660 6639019 -22365637 - TAHRE LINE telomeric -9261 1202 843 8 635 377 204 7 53 chrUextra 6639019 6639169 -22365487 - TAHRE LINE telomeric -10034 429 287 8 635 907 9 0 0 chrUextra 6639269 6639381 -22365275 + DM1731_I LTR Copia 3865 3976 0 8 635 2700 30 0 3 chrUextra 6639381 6639718 -22364938 + DM1731_LTR LTR Copia 1 336 0 8 635 525 284 77 40 chrUextra 6639722 6640100 -22364556 - Copia_I LTR Copia -401 4192 3801 8 635 317 197 0 0 chrUextra 6640208 6640279 -22364377 - STALKER4_I LTR Gypsy -6225 305 235 8 635 31 58 0 0 chrUextra 6640280 6640332 -22364324 + AT_rich Low_complexity Low_complexity 1 52 0 8 635 3153 55 1 14 chrUextra 6640420 6640859 -22363797 - STALKER4_LTR LTR Gypsy -3 399 1 8 635 611 0 0 0 chrUextra 6640859 6640932 -22363724 - STALKER4_I LTR Gypsy 0 6530 6458 8 635 575 200 0 0 chrUextra 6640928 6641043 -22363613 + G_DM LINE Jockey 1069 1183 -3163 8 635 3257 187 17 23 chrUextra 6642083 6642921 -22361735 - SAR_DM Satellite Satellite -262 1210 378 8 635 3596 25 83 1 chrUextra 6643021 6643859 -22360797 - R1_DM LINE R1 -1250 4106 3200 8 635 1743 73 3 28 chrUextra 6643959 6644228 -22360428 + STALKER4_LTR LTR Gypsy 144 392 -10 8 635 1803 52 40 4 chrUextra 6644369 6644620 -22360036 - DMTOM1_LTR LTR Gypsy -150 260 1 8 635 397 242 38 44 chrUextra 6644618 6644778 -22359878 - DM176_I LTR Gypsy 0 6420 6262 8 635 3091 195 18 19 chrUextra 6644897 6645735 -22358921 + SAR_DM Satellite Satellite 1 836 -208 8 635 7061 14 0 0 chrUextra 6645835 6646673 -22357983 - IDEFIX_I LTR Gypsy -3601 2027 1190 8 635 3590 214 21 19 chrUextra 6646773 6648548 -22356108 - SAR_DM Satellite Satellite -514 1778 1 8 635 850 9 0 0 chrUextra 6648649 6648754 -22355902 + PROTOP DNA P 257 361 -4119 8 635 1732 104 16 60 chrUextra 6648805 6649121 -22355535 - Gypsy6A_LTR LTR Gypsy -118 302 1 8 635 2491 28 47 8 chrUextra 6649121 6649485 -22355171 + PROTOP DNA P 359 736 -3744 8 635 538 148 3 30 chrUextra 6649587 6649770 -22354886 + XDMR Unknown Unknown 111 361 0 8 635 3098 189 15 24 chrUextra 6649622 6650425 -22354231 - SAR_DM Satellite Satellite -259 1213 418 8 635 6220 54 1 0 chrUextra 6650525 6651363 -22353293 + IDEFIX_I LTR Gypsy 3496 4334 -1294 8 635 2781 43 89 0 chrUextra 6651497 6651892 -22352764 + PROTOP_A DNA P 84 513 -592 8 635 28 71 0 0 chrUextra 6652031 6652087 -22352569 + AT_rich Low_complexity Low_complexity 1 56 0 8 635 29 47 0 0 chrUextra 6652131 6652174 -22352482 + AT_rich Low_complexity Low_complexity 1 43 0 8 635 28 71 0 0 chrUextra 6652212 6652268 -22352388 + AT_rich Low_complexity Low_complexity 1 56 0 8 635 6864 17 0 7 chrUextra 6652401 6653239 -22351417 - FW_DM LINE Jockey -2258 2434 1603 8 635 256 244 216 9 chrUextra 6653409 6653525 -22351131 + DIVER2_I LTR Pao 3190 3329 -818 8 635 241 143 0 0 chrUextra 6653732 6653773 -22350883 - G5A_DM LINE Jockey -853 1988 1948 8 635 2360 57 3 0 chrUextra 6653773 6654088 -22350568 - PROTOP DNA P 0 4480 4165 8 635 274 88 275 0 chrUextra 6654097 6654177 -22350479 - PROTOP DNA P -3732 748 646 8 635 2259 33 3 16 chrUextra 6654277 6654584 -22350072 + IDEFIX_LTR LTR Gypsy 292 594 0 8 635 22 0 0 0 chrUextra 6654696 6654718 -22349938 + AT_rich Low_complexity Low_complexity 1 22 0 8 635 27 29 0 0 chrUextra 6654774 6654808 -22349848 + AT_rich Low_complexity Low_complexity 1 34 0 8 635 415 0 0 19 chrUextra 6655057 6655109 -22349547 + IDEFIX_I LTR Gypsy 1 51 -5577 8 635 6774 31 1 0 chrUextra 6655215 6656053 -22348603 + DIVER_I LTR Pao 3546 4384 -1259 8 635 6533 43 1 4 chrUextra 6656153 6656991 -22347665 - BATUMI_I LTR Pao -2637 5326 4491 8 635 6368 41 2 9 chrUextra 6657091 6657929 -22346727 + BATUMI_I LTR Pao 3035 3866 -4097 8 635 875 127 23 57 chrUextra 6660479 6660655 -22344001 + ACCORD2_LTR LTR Gypsy 46 215 0 8 635 366 94 0 159 chrUextra 6660655 6660743 -22343913 + ACCORD2_I LTR Gypsy 1 74 -7138 8 635 6646 16 1 0 chrUextra 6660843 6661681 -22342975 + QUASIMODO_I LTR Gypsy 4443 5281 -779 8 635 755 161 0 43 chrUextra 6662368 6662556 -22342100 + CT-rich Low_complexity Low_complexity 1 180 0 8 635 255 170 0 0 chrUextra 6662572 6662619 -22342037 + CT-rich Low_complexity Low_complexity 2 48 0 8 635 4555 16 27 0 chrUextra 6662719 6663281 -22341375 - IVK_DM LINE I -4825 577 1 8 635 475 247 17 29 chrUextra 6663282 6663457 -22341199 - QUASIMODO_I LTR Gypsy -361 5699 5527 8 635 831 19 65 0 chrUextra 6663449 6663557 -22341099 + PROTOP_A DNA P 176 290 -815 8 635 1597 33 5 5 chrUextra 6663657 6663854 -22340802 + QUASIMODO_I LTR Gypsy 1613 1809 -4251 8 635 2297 0 0 0 chrUextra 6663854 6664130 -22340526 - Copia_LTR LTR Copia 0 276 1 8 635 3133 0 0 3 chrUextra 6664130 6664495 -22340161 - Copia_I LTR Copia 0 4593 4230 8 635 1626 198 68 41 chrUextra 6664603 6665119 -22339537 + Gypsy12_LTR LTR Gypsy 957 1486 -850 8 635 670 154 8 0 chrUextra 6665120 6665237 -22339419 + Gypsy12_LTR LTR Gypsy 2145 2262 -18 8 635 491 249 143 21 chrUextra 6665244 6665433 -22339223 + TAHRE LINE telomeric 9807 10018 -445 8 635 3399 184 8 14 chrUextra 6665533 6666371 -22338285 + SAR_DM Satellite Satellite 1 832 -411 8 635 6181 38 32 5 chrUextra 6666471 6667309 -22337347 - HETA LINE telomeric -2284 3797 2937 8 635 7123 9 4 0 chrUextra 6667409 6668247 -22336409 + R1_DM LINE R1 1916 2756 -2600 8 635 7033 18 0 0 chrUextra 6668347 6669185 -22335471 + FW_DM LINE Jockey 3638 4475 -217 8 635 1296 189 62 44 chrUextra 6669285 6669673 -22334983 - STALKER4_I LTR Gypsy -5251 1279 885 8 635 593 91 20 10 chrUextra 6670022 6670122 -22334534 - STALKER4_I LTR Gypsy -5645 885 785 8 635 4747 57 13 82 chrUextra 6670227 6671052 -22333604 - BATUMI_I LTR Pao -6561 1402 635 8 635 867 20 0 0 chrUextra 6671895 6671996 -22332660 + (TTCTC)n Simple_repeat Simple_repeat 5 105 0 8 635 6544 29 47 0 chrUextra 6672096 6672933 -22331723 - FW_DM LINE Jockey -3450 1242 367 8 635 3096 200 12 22 chrUextra 6673038 6673870 -22330786 - SAR_DM Satellite Satellite -227 1245 422 8 635 3029 37 3 0 chrUextra 6673970 6674352 -22330304 + R1_DM LINE R1 4684 5066 -290 8 635 954 26 0 0 chrUextra 6674349 6674463 -22330193 + R1_DM LINE R1 5243 5356 0 8 635 2208 65 6 6 chrUextra 6674496 6674807 -22329849 + R1_DM LINE R1 1 311 -5045 8 635 2892 43 10 12 chrUextra 6674907 6675308 -22329348 - BATUMI_I LTR Pao -1093 6870 6471 8 635 2382 68 116 0 chrUextra 6675303 6675744 -22328912 + BATUMI_I LTR Pao 7344 7835 -128 8 635 1452 35 5 5 chrUextra 6675844 6676046 -22328610 + ROO_I LTR Pao 945 1146 -7110 8 635 3285 180 22 21 chrUextra 6676784 6677606 -22327050 + SAR_DM Satellite Satellite 369 1191 -281 8 635 272 56 0 0 chrUextra 6677582 6677618 -22327038 - ARS406_DM Unknown Unknown -164 189 154 8 635 2420 35 79 0 chrUextra 6678237 6678555 -22326101 + DMCR1A LINE CR1 1082 1424 -3046 8 635 4561 13 7 8 chrUextra 6678655 6679266 -22325390 + STALKER4_I LTR Gypsy 5921 6530 0 8 635 1957 0 0 0 chrUextra 6679266 6679492 -22325164 + STALKER4_LTR LTR Gypsy 1 226 -176 8 635 274 30 0 0 chrUextra 6679594 6679627 -22325029 - DMRT1B LINE R1 -5150 33 1 8 635 4682 31 2 0 chrUextra 6679844 6680429 -22324227 + R1_DM LINE R1 2559 3144 -2212 8 635 2602 207 26 61 chrUextra 6680532 6681364 -22323292 + TART_B1 LINE telomeric 905 1707 -8947 8 635 1306 256 82 16 chrUextra 6681740 6682303 -22322353 + QUASIMODO_I LTR Gypsy 4367 4966 -1094 8 635 3115 184 16 16 chrUextra 6682403 6683240 -22321416 - SAR_DM Satellite Satellite -556 837 1 8 79 3388 170 24 20 chrUextra 6684285 6685114 -22319542 - SAR_DM Satellite Satellite -300 1172 341 8 636 3322 178 28 21 chrUextra 6685215 6686051 -22318605 - SAR_DM Satellite Satellite -365 1107 267 8 636 307 27 0 0 chrUextra 6686151 6686188 -22318468 - NTS_DM Other Other -203 37 1 8 636 1674 21 16 25 chrUextra 6686188 6686430 -22318226 - NTS_DM Other Other 0 240 1 8 636 1378 20 20 25 chrUextra 6686430 6686634 -22318022 - NTS_DM Other Other 0 240 38 8 636 817 0 0 0 chrUextra 6686634 6686730 -22317926 - NTS_DM Other Other -107 133 38 8 636 832 9 9 27 chrUextra 6686730 6686841 -22317815 - NTS_DM Other Other -107 133 25 8 636 21 57 0 0 chrUextra 6686867 6686902 -22317754 + AT_rich Low_complexity Low_complexity 1 35 0 8 636 547 35 0 12 chrUextra 6686902 6686988 -22317668 - NTS_DM Other Other -39 201 117 8 636 4381 104 105 5 chrUextra 6687155 6687925 -22316731 - TART LINE telomeric -6799 7678 6832 8 636 2751 124 128 26 chrUextra 6688025 6688862 -22315794 - TART LINE telomeric -4395 10082 9435 8 636 6306 4 24 20 chrUextra 6688962 6689799 -22314857 + MAX_I LTR Pao 581 1420 -6494 8 636 1457 0 0 0 chrUextra 6689899 6690065 -22314591 + LSU-rRNA_Dme rRNA rRNA 2416 2581 -1319 8 636 5808 1 0 0 chrUextra 6690063 6690736 -22313920 + R2_DM LINE R2 510 1182 -2425 8 636 213 296 0 20 chrUextra 6691388 6691488 -22313168 + T-rich Low_complexity Low_complexity 3 100 0 8 636 880 80 7 22 chrUextra 6691773 6692610 -22312046 + RSP Satellite Satellite 1 824 0 8 636 2979 26 0 0 chrUextra 6692710 6693090 -22311566 - IDEFIX_I LTR Gypsy -1715 3913 3534 8 636 1585 16 0 0 chrUextra 6693088 6693275 -22311381 - DIVER2_LTR LTR Pao -198 187 1 8 636 2111 15 4 11 chrUextra 6693275 6693547 -22311109 - DIVER2_I LTR Pao 0 4147 3878 8 636 3497 0 43 2 chrUextra 6693647 6694064 -22310592 - DOC LINE Jockey -4288 437 4 8 636 2004 161 10 10 chrUextra 6694068 6694483 -22310173 + SAR_DM Satellite Satellite 630 1044 -428 8 636 29 0 0 0 chrUextra 6694672 6694701 -22309955 + AT_rich Low_complexity Low_complexity 1 29 0 8 636 975 109 0 0 chrUextra 6694703 6695120 -22309536 + (TTA)n Simple_repeat Simple_repeat 1 417 0 8 636 29 0 0 0 chrUextra 6695253 6695282 -22309374 + AT_rich Low_complexity Low_complexity 1 29 0 8 636 762 103 0 0 chrUextra 6695284 6695420 -22309236 + (TTA)n Simple_repeat Simple_repeat 3 138 0 8 636 6806 13 7 0 chrUextra 6695521 6696358 -22308298 + STALKER4_I LTR Gypsy 2449 3291 -3239 8 636 5783 39 77 19 chrUextra 6696459 6697295 -22307361 - BATUMI_I LTR Pao -4258 3705 2822 8 636 3028 14 0 0 chrUextra 6697395 6697756 -22306900 + PROTOP DNA P 4120 4480 0 8 636 2201 213 2 2 chrUextra 6697756 6698232 -22306424 - ROVER-I_DM LTR Gypsy -3720 2864 2389 8 636 6713 18 31 0 chrUextra 6698332 6699169 -22305487 + DOC2_DM LINE Jockey 1473 2335 -2458 8 636 2948 50 86 0 chrUextra 6699269 6699687 -22304969 + PROTOP_A DNA P 652 1105 0 8 636 26 30 0 0 chrUextra 6700064 6700097 -22304559 + AT_rich Low_complexity Low_complexity 1 33 0 8 636 5077 35 32 3 chrUextra 6700205 6700789 -22303867 - DMRT1B LINE R1 -4437 746 163 8 636 180 0 0 0 chrUextra 6700789 6700809 -22303847 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 8 636 5077 35 32 3 chrUextra 6700809 6700887 -22303769 - DMRT1B LINE R1 -5021 162 66 8 636 986 117 7 0 chrUextra 6700887 6701041 -22303615 - DMRT1C LINE R1 -4788 655 501 8 636 7174 0 1 4 chrUextra 6701141 6701977 -22302679 + SSU-rRNA_Dme rRNA rRNA 676 1509 -486 8 636 252 250 0 0 chrUextra 6702161 6702221 -22302435 + TV1I LTR Gypsy 5903 5962 -1 8 636 929 72 0 0 chrUextra 6703013 6703151 -22301505 - ARS406_DM Unknown Unknown -215 138 1 8 636 3190 183 9 13 chrUextra 6703058 6703849 -22300807 + SAR_DM Satellite Satellite 195 982 -490 8 636 6316 49 4 4 chrUextra 6704885 6705721 -22298935 + IDEFIX_I LTR Gypsy 2349 3184 -2444 8 636 1197 65 0 0 chrUextra 6706145 6706375 -22298281 + (TTCTCC)n Simple_repeat Simple_repeat 1 230 0 8 636 1205 74 0 0 chrUextra 6706757 6706933 -22297723 - ARS406_DM Unknown Unknown -177 176 1 8 636 2631 169 9 14 chrUextra 6706933 6707592 -22297064 + SAR_DM Satellite Satellite 1 830 -416 8 636 2772 0 0 0 chrUextra 6707693 6708008 -22296648 + LSU-rRNA_Dme rRNA rRNA 2340 2654 -1246 8 636 4198 6 4 0 chrUextra 6708038 6708529 -22296127 + R1_DM LINE R1 1 493 -4863 8 636 3828 30 2 0 chrUextra 6708990 6709465 -22295191 + PROTOP DNA P 1 476 -4004 8 636 2072 293 13 23 chrUextra 6709566 6710390 -22294266 - FROGGER_I LTR Copia -691 1386 571 8 636 4281 91 75 45 chrUextra 6710546 6711331 -22293325 + Gypsy12_I LTR Gypsy 1 809 -4737 8 636 6639 24 41 0 chrUextra 6711437 6712273 -22292383 - R1_DM LINE R1 -1751 3605 2736 8 636 2274 222 54 53 chrUextra 6712373 6713209 -22291447 + Gypsy12_LTR LTR Gypsy 627 1463 -873 8 636 3198 185 32 16 chrUextra 6713309 6714145 -22290511 + SAR_DM Satellite Satellite 1 848 -208 8 636 7346 0 0 0 chrUextra 6714245 6715081 -22289575 + MAX_I LTR Pao 3816 4651 -3263 8 636 4195 17 85 2 chrUextra 6715181 6715722 -22288934 - ROO_I LTR Pao -2518 5738 5153 8 636 2324 10 3 0 chrUextra 6715725 6716017 -22288639 - ROO_I LTR Pao -3323 4933 4641 8 636 3732 158 12 17 chrUextra 6716133 6716953 -22287703 + SAR_DM Satellite Satellite 191 1006 -466 8 636 3044 26 38 13 chrUextra 6717495 6717889 -22286767 + PROTOP_A DNA P 1 404 -701 8 636 1467 5 5 0 chrUextra 6717989 6718173 -22286483 + ROO_I LTR Pao 8072 8256 0 8 636 3766 0 0 0 chrUextra 6718173 6718601 -22286055 + ROO_LTR LTR Pao 1 428 0 8 636 4341 98 5 1 chrUextra 6719085 6719759 -22284897 + S_DM DNA Tc1 1 676 -1060 8 636 2449 50 9 0 chrUextra 6719861 6720184 -22284472 - TART LINE telomeric -12107 2370 2045 8 636 3665 61 78 0 chrUextra 6720175 6720697 -22283959 - TART LINE telomeric -12618 1859 1297 8 636 605 234 7 109 chrUextra 6720820 6721094 -22283562 - ROVER-LTR_DM LTR Gypsy -121 246 1 8 636 2452 162 28 8 chrUextra 6721094 6721629 -22283027 - ROVER-I_DM LTR Gypsy 0 6584 6039 8 636 334 252 22 37 chrUextra 6721737 6721873 -22282783 - QUASIMODO_I LTR Gypsy -400 5660 5527 8 636 2201 66 33 3 chrUextra 6721865 6722198 -22282458 + PROTOP_B DNA P 176 518 -635 8 636 917 39 394 0 chrUextra 6722174 6722402 -22282254 + PROTOP DNA P 541 859 -3621 8 636 1105 69 19 0 chrUextra 6722410 6722569 -22282087 - Jockey2 LINE Jockey -1608 1820 1659 8 636 1888 252 34 32 chrUextra 6722673 6723268 -22281388 - TOM_I LTR Gypsy -5100 1012 417 8 636 324 273 116 83 chrUextra 6723812 6724088 -22280568 - Invader1_LTR LTR Gypsy -55 368 84 8 636 658 157 148 14 chrUextra 6724297 6724439 -22280217 + DMLTR5 LTR Gypsy 44 204 -62 8 636 4253 62 16 96 chrUextra 6724542 6725377 -22279279 + BATUMI_I LTR Pao 86 853 -7110 8 636 501 340 91 14 chrUextra 6725487 6726003 -22278653 - BLASTOPIA_I LTR Gypsy -1301 3180 2625 8 636 6893 12 36 0 chrUextra 6726413 6727249 -22277407 - STALKER4_I LTR Gypsy -1845 4685 3820 8 636 4328 79 50 111 chrUextra 6727349 6728185 -22276471 - HETA LINE telomeric -4557 1524 740 8 636 946 22 0 7 chrUextra 6728285 6728420 -22276236 + NTS_DM Other Other 68 201 -39 8 636 21 57 0 0 chrUextra 6728420 6728455 -22276201 + AT_rich Low_complexity Low_complexity 1 35 0 8 636 832 9 9 27 chrUextra 6728481 6728592 -22276064 + NTS_DM Other Other 25 133 -107 8 636 817 0 0 0 chrUextra 6728592 6728688 -22275968 + NTS_DM Other Other 38 133 -107 8 636 1387 25 20 20 chrUextra 6728688 6728891 -22275765 + NTS_DM Other Other 38 240 0 8 636 1647 22 17 17 chrUextra 6728891 6729121 -22275535 + NTS_DM Other Other 1 230 -10 8 636 6208 41 52 1 chrUextra 6729225 6730057 -22274599 - R1_DM LINE R1 -3581 1775 902 8 636 5872 58 0 5 chrUextra 6730157 6730992 -22273664 + IDEFIX_I LTR Gypsy 4626 5456 -172 8 636 3833 38 28 4 chrUextra 6731092 6731592 -22273064 - DMCR1A LINE CR1 -3701 769 258 8 636 770 38 0 9 chrUextra 6731597 6731704 -22272952 - DMCR1A LINE CR1 -4364 106 1 8 636 291 232 0 0 chrUextra 6732281 6732350 -22272306 - BS2 LINE Jockey -507 4214 4146 8 636 22 0 0 0 chrUextra 6732625 6732647 -22272009 + AT_rich Low_complexity Low_complexity 1 22 0 8 636 3182 109 88 46 chrUextra 6732962 6733597 -22271059 - Gypsy12_I LTR Gypsy -4662 884 223 8 636 875 281 47 33 chrUextra 6733898 6734686 -22269970 - STALKER4_I LTR Gypsy -3098 3432 2634 8 636 236 273 0 0 chrUextra 6734834 6734900 -22269756 + Gypsy4_I LTR Gypsy 1067 1132 -5156 8 636 994 124 80 16 chrUextra 6734932 6735120 -22269536 + DMCR1A LINE CR1 454 653 -3817 8 636 509 327 60 46 chrUextra 6735128 6735647 -22269009 + Gypsy4_I LTR Gypsy 1220 1745 -4543 8 636 2410 18 0 0 chrUextra 6735767 6736053 -22268603 - Invader4_I LTR Gypsy -2127 286 1 8 636 3003 6 0 0 chrUextra 6736053 6736399 -22268257 - Invader4_LTR LTR Gypsy 0 346 1 8 636 40 0 0 0 chrUextra 6736399 6736439 -22268217 + AT_rich Low_complexity Low_complexity 1 40 0 8 636 551 0 124 12 chrUextra 6736439 6736600 -22268056 + (TA)n Simple_repeat Simple_repeat 2 180 0 8 636 4676 0 0 54 chrUextra 6736702 6737328 -22267328 + MDG3_I LTR Gypsy 4395 4986 0 8 636 1785 5 0 0 chrUextra 6737328 6737537 -22267119 + MDG3_LTR LTR Gypsy 1 209 -58 8 636 1422 0 0 6 chrUextra 6737637 6737805 -22266851 + STALKER4_LTR LTR Gypsy 236 402 0 8 636 4350 83 1 19 chrUextra 6737805 6738472 -22266184 + STALKER4_I LTR Gypsy 1 655 -5875 8 636 6904 22 5 0 chrUextra 6738572 6739407 -22265249 - R1_DM LINE R1 -689 4667 3829 8 636 509 126 70 12 chrUextra 6740442 6740584 -22264072 - TAHRE LINE telomeric -3988 10489 10370 8 636 684 245 117 16 chrUextra 6740584 6740841 -22263815 - TAHRE LINE telomeric -374 10089 9807 8 636 2299 110 40 54 chrUextra 6740853 6741277 -22263379 - Gypsy12_LTR LTR Gypsy -23 2313 1896 8 636 3165 6 0 0 chrUextra 6741377 6741739 -22262917 - R2_DM LINE R2 -192 3415 3054 8 636 4050 4 0 0 chrUextra 6741743 6742212 -22262444 - LSU-rRNA_Dme rRNA rRNA -1319 2581 2113 8 636 3701 199 8 26 chrUextra 6742312 6743143 -22261513 + TAHRE LINE telomeric 394 1209 -9254 8 636 3986 2 0 0 chrUextra 6743629 6744082 -22260574 + HOBO DNA hAT 1 453 -2563 8 636 7077 2 1 0 chrUextra 6744182 6745017 -22259639 + MDG3_I LTR Gypsy 2383 3218 -1768 8 636 3492 227 14 23 chrUextra 6745117 6746885 -22257771 + SAR_DM Satellite Satellite 1 1753 -365 8 636 4176 35 3 56 chrUextra 6746987 6747592 -22257064 + MAX_I LTR Pao 6876 7448 -466 8 636 1778 48 0 0 chrUextra 6747594 6747822 -22256834 + MAX_I LTR Pao 7646 7873 -41 8 636 3286 0 0 0 chrUextra 6747922 6748299 -22256357 - FW_DM LINE Jockey -4315 377 1 8 636 1005 68 166 0 chrUextra 6748467 6748757 -22255899 - PROTOP DNA P -1279 3201 2864 8 636 3295 174 36 25 chrUextra 6748857 6749688 -22254968 + SAR_DM Satellite Satellite 378 1217 -255 8 636 3650 18 0 0 chrUextra 6749792 6750233 -22254423 + PROTOP DNA P 4040 4480 0 8 636 2055 103 172 0 chrUextra 6750233 6750626 -22254030 - TART_B1 LINE telomeric -9022 1632 1172 8 636 3197 191 14 24 chrUextra 6750727 6751554 -22253102 + SAR_DM Satellite Satellite 438 1256 -216 8 636 3567 177 8 18 chrUextra 6751663 6752493 -22252163 - SAR_DM Satellite Satellite -369 1103 282 8 636 3455 11 109 4 chrUextra 6752597 6753432 -22251224 - DOC LINE Jockey -664 4061 3139 8 636 3196 187 14 19 chrUextra 6753532 6754367 -22250289 + SAR_DM Satellite Satellite 1 830 -208 8 636 940 179 31 14 chrUextra 6754469 6755302 -22249354 - SAR_DM Satellite Satellite -808 846 1 8 636 3206 69 9 0 chrUextra 6755402 6755838 -22248818 + BS3_DM LINE Jockey 605 1044 -746 8 636 1721 76 0 0 chrUextra 6755828 6756064 -22248592 + BS3_DM LINE Jockey 1311 1546 -244 8 636 1039 85 6 6 chrUextra 6756072 6756237 -22248419 + DM297_I LTR Gypsy 2179 2343 -3824 8 636 571 0 0 0 chrUextra 6756337 6756402 -22248254 - MAX_I LTR Pao -7849 65 1 8 636 2691 12 3 0 chrUextra 6756402 6756722 -22247934 - MAX_LTR LTR Pao 0 321 1 8 636 27 0 0 0 chrUextra 6756722 6756749 -22247907 + AT_rich Low_complexity Low_complexity 1 27 0 8 636 3558 2 0 0 chrUextra 6756749 6757172 -22247484 - MAX_I LTR Pao -482 7432 7010 8 636 3840 13 0 0 chrUextra 6757272 6757725 -22246931 - DOC LINE Jockey -4241 484 32 8 636 3005 8 3 0 chrUextra 6757756 6758107 -22246549 - DOC2_DM LINE Jockey -2176 2617 2266 8 636 6906 20 1 0 chrUextra 6758207 6759042 -22245614 - R1_DM LINE R1 -3119 2237 1402 8 636 2051 4 4 0 chrUextra 6760077 6760323 -22244333 + Gypsy6_I LTR Gypsy 1960 2206 -4806 8 636 5088 8 0 0 chrUextra 6760322 6760912 -22243744 + Gypsy6_I LTR Gypsy 2418 3007 -4005 8 636 1910 184 51 20 chrUextra 6761012 6761501 -22243155 - Stalker2_I LTR Gypsy -6608 794 291 8 636 28 48 0 0 chrUextra 6761508 6761550 -22243106 + AT_rich Low_complexity Low_complexity 1 42 0 8 636 1770 62 0 12 chrUextra 6761602 6761847 -22242809 - STALKER4_LTR LTR Gypsy -3 399 158 8 636 4205 19 0 2 chrUextra 6761947 6762467 -22242189 + DOC LINE Jockey 4207 4725 0 8 636 570 98 69 0 chrUextra 6762471 6762573 -22242083 - ROVER-LTR_DM LTR Gypsy -258 109 1 8 636 298 0 0 0 chrUextra 6762889 6762925 -22241731 + MAX_I LTR Pao 920 955 -6959 8 636 1850 118 37 233 chrUextra 6762964 6763716 -22240940 + MAX_I LTR Pao 938 1542 -6372 8 636 1255 22 21 21 chrUextra 6763816 6764004 -22240652 + NTS_DM Other Other 53 240 0 8 636 1756 17 17 17 chrUextra 6764004 6764244 -22240412 + NTS_DM Other Other 1 240 0 8 636 1756 17 17 17 chrUextra 6764244 6764484 -22240172 + NTS_DM Other Other 1 240 0 8 636 1251 30 0 6 chrUextra 6764484 6764650 -22240006 + NTS_DM Other Other 1 165 -75 8 636 555 310 78 38 chrUextra 6764750 6765580 -22239076 - HMSBEAGLE_I LTR Gypsy -1234 5295 4433 8 636 6715 36 0 0 chrUextra 6765684 6766518 -22238138 + MAX_I LTR Pao 5104 5937 -1977 8 636 6956 7 29 0 chrUextra 6766618 6767452 -22237204 + DMRT1B LINE R1 2018 2875 -2308 8 636 4028 65 29 2 chrUextra 6768486 6769320 -22235336 + PROTOP DNA P 157 880 -225 8 636 3235 190 14 22 chrUextra 6769421 6770251 -22234405 + SAR_DM Satellite Satellite 425 1248 -224 8 636 6126 29 71 2 chrUextra 6770354 6771180 -22233476 + ROOA_I LTR Pao 5658 6540 -309 8 636 267 164 0 18 chrUextra 6771291 6771347 -22233309 - NINJA_LTR LTR Pao -147 170 116 8 636 237 160 0 20 chrUextra 6771403 6771454 -22233202 - Gypsy8_LTR LTR Gypsy -254 50 1 8 636 212 0 0 35 chrUextra 6772292 6772321 -22232335 + (TAA)n Simple_repeat Simple_repeat 2 29 0 8 636 6512 23 0 1 chrUextra 6773156 6773949 -22230707 + Invader3_I LTR Gypsy 3261 4052 -836 8 636 453 0 0 0 chrUextra 6773936 6773989 -22230667 + Invader3_I LTR Gypsy 4827 4879 -9 8 636 4099 2 6 4 chrUextra 6774090 6774580 -22230076 + LSU-rRNA_Dme rRNA rRNA 1298 1788 -2112 8 636 1120 0 0 0 chrUextra 6774624 6774751 -22229905 + LSU-rRNA_Dme rRNA rRNA 1788 1914 -1986 8 636 1477 6 0 0 chrUextra 6774751 6774924 -22229732 + TRANSPAC_LTR LTR Gypsy 1 173 -157 8 636 4572 41 14 2 chrUextra 6775026 6775663 -22228993 + MDG1_I LTR Gypsy 5650 6294 -302 8 636 25 0 0 0 chrUextra 6775684 6775709 -22228947 + AT_rich Low_complexity Low_complexity 1 25 0 8 636 746 61 18 26 chrUextra 6775731 6775857 -22228799 + BATUMI_LTR LTR Pao 32 138 -134 8 636 3011 181 56 6 chrUextra 6775963 6776792 -22227864 - SAR_DM Satellite Satellite -682 870 1 8 636 1394 30 64 0 chrUextra 6776976 6777179 -22227477 - TLD2 Unknown Unknown -2 216 1 8 636 566 330 42 14 chrUextra 6777119 6777571 -22227085 - Gypsy6_I LTR Gypsy -3774 3238 2920 8 636 2734 210 25 54 chrUextra 6777826 6778660 -22225996 + TAHRE LINE telomeric 7042 7851 -2612 8 636 21 89 0 0 chrUextra 6778859 6778915 -22225741 + AT_rich Low_complexity Low_complexity 1 56 0 8 636 23 78 0 0 chrUextra 6778953 6779004 -22225652 + AT_rich Low_complexity Low_complexity 1 51 0 8 636 33 0 0 0 chrUextra 6779050 6779083 -22225573 + AT_rich Low_complexity Low_complexity 1 33 0 8 636 1094 45 8 0 chrUextra 6779460 6779594 -22225062 - PROTOP DNA P 0 4480 4346 8 636 40 67 0 0 chrUextra 6780346 6780421 -22224235 + AT_rich Low_complexity Low_complexity 1 75 0 8 636 1931 4 0 4 chrUextra 6780628 6780854 -22223802 - ACCORD2_I LTR Gypsy -1132 6080 5856 8 636 5286 13 0 2 chrUextra 6780852 6781462 -22223194 - ACCORD2_I LTR Gypsy -769 6443 5835 8 636 227 0 0 0 chrUextra 6781562 6781587 -22223069 - IDEFIX_I LTR Gypsy -5603 25 1 8 636 25 0 0 0 chrUextra 6781880 6781905 -22222751 + AT_rich Low_complexity Low_complexity 1 25 0 8 636 2365 27 7 3 chrUextra 6782097 6782396 -22222260 - IDEFIX_LTR LTR Gypsy 0 594 295 8 636 1488 19 0 0 chrUextra 6782496 6782709 -22221947 + (TTA)n Simple_repeat Simple_repeat 1 213 0 8 636 1560 135 39 36 chrUextra 6782730 6782957 -22221699 + Jockey2 LINE Jockey 3089 3318 -110 8 636 1176 28 0 0 chrUextra 6782957 6783101 -22221555 + (TTA)n Simple_repeat Simple_repeat 3 146 0 8 636 1560 135 39 36 chrUextra 6783101 6783204 -22221452 + Jockey2 LINE Jockey 3319 3420 -8 8 636 365 124 433 0 chrUextra 6783233 6783330 -22221326 - DNAREP1_DM LINE Penelope -175 419 281 8 636 7112 14 0 2 chrUextra 6783430 6784264 -22220392 + MDG3_I LTR Gypsy 2524 3355 -1631 8 636 24 32 0 0 chrUextra 6784695 6784726 -22219930 + AT_rich Low_complexity Low_complexity 1 31 0 8 636 324 0 0 0 chrUextra 6784875 6784911 -22219745 + (T)n Simple_repeat Simple_repeat 1 36 0 8 636 5846 53 23 42 chrUextra 6785298 6786132 -22218524 + HETA LINE telomeric 3458 4275 -1806 8 636 2240 133 24 37 chrUextra 6786232 6787066 -22217590 + DMSAT6 Satellite Satellite 1 822 -40 8 636 378 281 104 29 chrUextra 6787649 6787994 -22216662 - QUASIMODO_I LTR Gypsy 0 6060 5690 8 636 5278 22 0 15 chrUextra 6788100 6788751 -22215905 + CIRCE LINE Composite 4340 4980 -1376 8 636 3418 177 46 25 chrUextra 6789035 6789868 -22214788 + SAR_DM Satellite Satellite 332 1181 -291 8 636 3177 169 11 8 chrUextra 6789968 6790800 -22213856 + SAR_DM Satellite Satellite 1 833 -399 8 636 4616 38 106 40 chrUextra 6791054 6791735 -22212921 - TRANSIB2 DNA Transib -624 2220 1495 8 636 6916 18 34 0 chrUextra 6791836 6792670 -22211986 + STALKER4_I LTR Gypsy 2032 2893 -3637 8 636 4110 35 27 2 chrUextra 6792770 6793282 -22211374 + FW_DM LINE Jockey 4167 4691 -1 8 636 268 29 0 0 chrUextra 6793291 6793325 -22211331 - R1_DM LINE R1 -3966 1390 1357 8 636 2321 29 4 4 chrUextra 6793325 6793604 -22211052 - R1_DM LINE R1 -4150 1206 928 8 636 7077 31 0 1 chrUextra 6793704 6794538 -22210118 - R1_DM LINE R1 -1955 3401 2569 8 636 3466 188 22 20 chrUextra 6794642 6795472 -22209184 - SAR_DM Satellite Satellite -242 1230 400 8 636 47 0 0 0 chrUextra 6796087 6796134 -22208522 + AT_rich Low_complexity Low_complexity 1 47 0 8 636 6120 1 1 0 chrUextra 6796506 6797178 -22207478 - LSU-rRNA_Dme rRNA rRNA -588 3312 2640 8 636 1437 12 6 0 chrUextra 6797176 6797339 -22207317 - R1_DM LINE R1 0 5356 5193 8 636 3378 185 23 24 chrUextra 6797442 6798272 -22206384 - SAR_DM Satellite Satellite -242 1230 402 8 636 3190 159 45 8 chrUextra 6798374 6798421 -22206235 + SAR_DM Satellite Satellite 1 59 -1660 8 636 1089 88 0 0 chrUextra 6798421 6798580 -22206076 - ARS406_DM Unknown Unknown -164 189 31 8 636 3190 159 45 8 chrUextra 6798580 6799205 -22205451 + SAR_DM Satellite Satellite 60 861 -858 8 636 7498 7 2 0 chrUextra 6799305 6800137 -22204519 - LSU-rRNA_Dme rRNA rRNA -422 3478 2645 8 636 3547 186 16 19 chrUextra 6800240 6801070 -22203586 - SAR_DM Satellite Satellite -359 1113 287 8 636 5236 14 44 0 chrUextra 6801171 6802004 -22202652 + FW_DM LINE Jockey 3032 3901 -791 8 636 2703 184 10 6 chrUextra 6802104 6802936 -22201720 - SAR_DM Satellite Satellite -710 835 1 8 636 1757 84 2 2 chrUextra 6803970 6804228 -22200428 - TART LINE telomeric -9562 4915 4698 8 636 1729 20 0 0 chrUextra 6804237 6804432 -22200224 - TART LINE telomeric -9789 4688 4494 8 636 379 19 0 19 chrUextra 6804428 6804481 -22200175 - TAHRE LINE telomeric -6 10457 10406 8 636 2150 77 16 9 chrUextra 6804482 6804798 -22199858 - TART LINE telomeric -3820 10657 10340 8 636 333 271 123 91 chrUextra 6805175 6805451 -22199205 - Invader1_LTR LTR Gypsy -55 368 84 8 636 434 150 0 24 chrUextra 6805654 6805736 -22198920 + DMLTR5 LTR Gypsy 44 123 -143 8 636 1362 47 0 0 chrUextra 6806499 6806669 -22197987 + (CCTTG)n Simple_repeat Simple_repeat 2 171 0 8 636 3293 3 0 0 chrUextra 6806769 6807155 -22197501 - ROO_I LTR Pao -7088 1168 783 8 636 4034 7 0 0 chrUextra 6807155 6807602 -22197054 - NOMAD_LTR LTR Gypsy 0 518 72 8 636 5760 67 17 3 chrUextra 6807702 6808461 -22196195 - R1_DM LINE R1 -4585 771 2 8 636 313 26 0 0 chrUextra 6808497 6808535 -22196121 - R1_DM LINE R1 0 5356 5319 8 636 992 170 37 82 chrUextra 6808635 6808879 -22195777 + TART LINE telomeric 3130 3362 -11115 8 636 2173 168 27 70 chrUextra 6808874 6809466 -22195190 + TART LINE telomeric 3683 4029 -10448 8 636 3466 188 8 17 chrUextra 6809583 6810386 -22194270 + SAR_DM Satellite Satellite 326 1120 -352 8 636 363 200 10 20 chrUextra 6810299 6810401 -22194255 - XDMR_DM Unknown Unknown 0 360 260 8 636 320 125 0 0 chrUextra 6810501 6810557 -22194099 + ARS406_DM Unknown Unknown 66 121 -232 8 636 3831 227 29 16 chrUextra 6810545 6812253 -22192403 - SAR_DM Satellite Satellite -545 1729 1 8 636 315 111 19 0 chrUextra 6812213 6812267 -22192389 + ARS406_DM Unknown Unknown 1 55 -298 8 636 5266 100 7 1 chrUextra 6812367 6813200 -22191456 - BATUMI_I LTR Pao -3298 4616 3704 8 636 1271 143 3 168 chrUextra 6813323 6813633 -22191023 - HOBO DNA hAT -2743 273 15 8 636 1229 53 0 0 chrUextra 6813982 6814133 -22190523 - NINJA_I LTR Pao -4371 1640 1490 8 636 3919 36 63 11 chrUextra 6814234 6814774 -22189882 - BATUMI_I LTR Pao -7395 568 1 8 636 1462 28 121 45 chrUextra 6814774 6814998 -22189658 - BATUMI_LTR LTR Pao 0 272 32 8 636 865 98 0 0 chrUextra 6815166 6815298 -22189358 - ARS406_DM Unknown Unknown -221 132 1 8 79 3427 178 31 14 chrUextra 6815202 6815999 -22188657 + SAR_DM Satellite Satellite 192 1002 -470 8 637 7041 14 1 0 chrUextra 6817032 6817865 -22186791 - QUASIMODO_I LTR Gypsy -4595 1465 632 8 637 702 186 14 14 chrUextra 6818044 6818191 -22186465 - HETRP_DM Satellite Satellite -197 1675 1529 8 637 702 186 14 14 chrUextra 6818349 6818496 -22186160 - HETRP_DM Satellite Satellite -197 1675 1529 8 637 494 224 16 16 chrUextra 6818624 6818751 -22185905 - HETRP_DM Satellite Satellite -197 1675 1549 8 637 192 40 0 0 chrUextra 6818751 6818776 -22185880 + (TC)n Simple_repeat Simple_repeat 2 26 0 8 637 1912 178 1 13 chrUextra 6818901 6819314 -22185342 - STALKER4_I LTR Gypsy -6705 697 235 8 637 22 0 0 0 chrUextra 6819341 6819363 -22185293 + AT_rich Low_complexity Low_complexity 1 22 0 8 637 2003 45 8 0 chrUextra 6819489 6819731 -22184925 - STALKER4_LTR LTR Gypsy -23 379 136 8 637 7088 8 0 1 chrUextra 6819831 6820664 -22183992 - Invader2_I LTR Gypsy -240 4352 3521 8 637 3260 243 35 16 chrUextra 6820765 6822520 -22182136 - SAR_DM Satellite Satellite -555 1788 1 8 637 2906 3 3 0 chrUextra 6822630 6822959 -22181697 + IVK_DM LINE I 5073 5402 0 8 637 760 285 28 30 chrUextra 6822964 6823463 -22181193 - STALKER4_I LTR Gypsy -3093 3437 2940 8 637 3698 274 37 22 chrUextra 6823571 6825316 -22179340 - SAR_DM Satellite Satellite -203 1770 1 8 637 479 107 0 0 chrUextra 6825254 6825329 -22179327 + ARS406_DM Unknown Unknown 1 75 -278 8 637 7382 11 4 0 chrUextra 6825429 6826262 -22178394 - Gypsy4_I LTR Gypsy -3210 3078 2243 8 637 23 0 0 0 chrUextra 6826432 6826455 -22178201 + AT_rich Low_complexity Low_complexity 1 23 0 8 637 1380 318 11 11 chrUextra 6826570 6827191 -22177465 + ROVER-I_DM LTR Gypsy 1057 1677 -4907 8 637 3007 226 29 13 chrUextra 6827302 6828128 -22176528 + SAR_DM Satellite Satellite 1 839 -203 8 637 1094 209 4 4 chrUextra 6828235 6828475 -22176181 - Stalker2_I LTR Gypsy -6872 530 291 8 637 1918 146 10 3 chrUextra 6828483 6828869 -22175787 - STALKER4_I LTR Gypsy -6790 612 233 8 637 225 116 0 44 chrUextra 6829016 6829061 -22175595 - STALKER4_I LTR Gypsy -7350 52 10 8 637 3137 11 0 0 chrUextra 6829161 6829517 -22175139 - R1_DM LINE R1 -1006 4350 3995 8 637 4185 8 2 2 chrUextra 6829514 6829994 -22174662 - R1_DM LINE R1 -1475 3881 3402 8 637 2209 0 0 4 chrUextra 6830094 6830348 -22174308 + FW_DM LINE Jockey 4437 4689 -3 8 637 5267 9 0 0 chrUextra 6830347 6830927 -22173729 - GTWIN_I LTR Gypsy -1292 5129 4550 8 637 632 36 12 0 chrUextra 6831027 6831110 -22173546 + ARS406_DM Unknown Unknown 104 187 -166 8 637 3566 269 29 37 chrUextra 6831049 6832788 -22171868 - SAR_DM Satellite Satellite -242 1725 1 8 637 7448 6 2 0 chrUextra 6832893 6833725 -22170931 + DOC2_DM LINE Jockey 1958 2791 -2002 8 637 6817 19 12 6 chrUextra 6833825 6834657 -22169999 - BATUMI_I LTR Pao -1649 6314 5478 8 637 3460 180 8 13 chrUextra 6834762 6835589 -22169067 - SAR_DM Satellite Satellite -396 1076 254 8 637 3532 174 16 11 chrUextra 6835689 6836509 -22168147 - SAR_DM Satellite Satellite -454 1018 195 8 637 602 133 0 0 chrUextra 6836416 6836521 -22168135 + ARS406_DM Unknown Unknown 1 105 -248 8 637 967 24 0 86 chrUextra 6836621 6836760 -22167896 - ROO_I LTR Pao -8129 127 1 8 637 3307 17 49 0 chrUextra 6836760 6837168 -22167488 - ROO_LTR LTR Pao 0 428 1 8 637 3303 182 26 10 chrUextra 6838510 6839316 -22165340 + SAR_DM Satellite Satellite 226 1044 -428 8 637 4924 16 0 0 chrUextra 6839417 6840027 -22164629 - PROTOP DNA P -106 4374 3765 8 637 855 0 0 0 chrUextra 6840028 6840131 -22164525 - PROTOP DNA P -2422 2058 1956 8 637 556 34 152 0 chrUextra 6840131 6840249 -22164407 - PROTOP DNA P -3779 701 566 8 637 3384 137 76 46 chrUextra 6840349 6841181 -22163475 + PROTOP_A DNA P 228 1084 -21 8 637 1851 4 4 4 chrUextra 6841281 6841516 -22163140 - Stalker2_I LTR Gypsy -3480 3922 3688 8 637 5038 0 5 0 chrUextra 6841513 6842113 -22162543 - Stalker2_I LTR Gypsy -4013 3389 2787 8 637 4846 47 62 0 chrUextra 6842213 6842885 -22161771 - R1_DM LINE R1 -1945 3411 2698 8 637 952 55 52 71 chrUextra 6842890 6843045 -22161611 - R2_DM LINE R2 -1537 2070 1919 8 637 1791 70 0 0 chrUextra 6843145 6843401 -22161255 - IDEFIX_I LTR Gypsy -1544 4084 3829 8 637 1617 46 0 0 chrUextra 6843758 6843975 -22160681 - IDEFIX_I LTR Gypsy -1793 3835 3619 8 637 1402 101 0 39 chrUextra 6844077 6844335 -22160321 - HETA LINE telomeric -5795 286 39 8 637 632 180 0 18 chrUextra 6844304 6844468 -22160188 - HETA LINE telomeric -5725 356 196 8 637 2234 157 14 11 chrUextra 6844463 6844908 -22159748 - TAHRE LINE telomeric -3 10460 10015 8 637 4216 56 16 113 chrUextra 6845009 6845841 -22158815 + BATUMI_I LTR Pao 30 780 -7183 8 637 6820 20 4 1 chrUextra 6845941 6846773 -22157883 + R1_DM LINE R1 3170 4003 -1353 8 637 3190 0 3 3 chrUextra 6847808 6848183 -22156473 + STALKER4_LTR LTR Gypsy 28 402 0 8 637 1521 71 14 0 chrUextra 6848213 6848424 -22156232 + Gypsy6A_LTR LTR Gypsy 207 420 0 8 637 6890 23 0 10 chrUextra 6848737 6849569 -22155087 - Gypsy12_I LTR Gypsy -504 5042 4219 8 637 6954 23 0 1 chrUextra 6849669 6850501 -22154155 + MAX_I LTR Pao 3156 3986 -3928 8 637 3150 69 0 2 chrUextra 6850601 6851054 -22153602 - BATUMI_I LTR Pao -209 7754 7303 8 637 2595 54 8 6 chrUextra 6851077 6851433 -22153223 + BATUMI_I LTR Pao 6427 6783 -1180 8 637 3319 181 18 24 chrUextra 6851538 6852365 -22152291 - SAR_DM Satellite Satellite -242 1230 409 8 637 444 221 0 9 chrUextra 6852465 6852579 -22152077 + XDMR_DM Unknown Unknown 248 360 0 8 637 3197 182 15 20 chrUextra 6852494 6853291 -22151365 - SAR_DM Satellite Satellite -354 1118 326 8 637 1428 84 6 3 chrUextra 6853401 6853758 -22150898 + (AATAG)n Simple_repeat Simple_repeat 1 357 0 8 637 1239 91 5 20 chrUextra 6853806 6854224 -22150432 + (AATAG)n Simple_repeat Simple_repeat 1 411 0 8 637 7307 0 0 0 chrUextra 6854329 6855161 -22149495 + MAX_I LTR Pao 3154 3985 -3929 8 637 2416 92 31 44 chrUextra 6855261 6856074 -22148582 + DMSAT6 Satellite Satellite 1 801 -6 8 637 4625 24 0 0 chrUextra 6856193 6856767 -22147889 + FW_DM LINE Jockey 4119 4692 0 8 637 1055 52 0 0 chrUextra 6856771 6856905 -22147751 - R1_DM LINE R1 -3966 1390 1257 8 637 628 81 0 83 chrUextra 6856904 6857025 -22147631 - R1_DM LINE R1 -4675 681 571 8 637 2316 106 30 12 chrUextra 6857130 6857955 -22146701 - DMSAT6 Satellite Satellite 0 840 1 8 637 3503 178 13 18 chrUextra 6858064 6858889 -22145767 + SAR_DM Satellite Satellite 332 1152 -320 8 637 2218 4 0 0 chrUextra 6858989 6859250 -22145406 - Copia_I LTR Copia -4332 261 1 8 637 2297 0 0 0 chrUextra 6859250 6859526 -22145130 - Copia_LTR LTR Copia 0 276 1 8 637 30 27 0 0 chrUextra 6859687 6859724 -22144932 + AT_rich Low_complexity Low_complexity 1 37 0 8 637 2734 124 74 0 chrUextra 6859921 6860752 -22143904 - TART_B1 LINE telomeric -8784 1870 983 8 637 3371 175 8 11 chrUextra 6860855 6861612 -22143044 - SAR_DM Satellite Satellite -425 1047 293 8 637 280 86 121 0 chrUextra 6861627 6861685 -22142971 + ARS406_DM Unknown Unknown 53 117 -236 8 637 1881 5 5 0 chrUextra 6861785 6862008 -22142648 - STALKER4_LTR LTR Gypsy -178 224 1 8 637 4535 13 5 7 chrUextra 6862008 6862617 -22142039 - STALKER4_I LTR Gypsy 0 6530 5923 8 637 7058 10 2 0 chrUextra 6862717 6863549 -22141107 + Gypsy6_I LTR Gypsy 466 1299 -5713 8 637 469 232 0 72 chrUextra 6863727 6863894 -22140762 - TOM_I LTR Gypsy -4630 1482 1328 8 637 1380 240 2 55 chrUextra 6864062 6864481 -22140175 - TOM_I LTR Gypsy -5089 1023 627 8 637 21 0 0 0 chrUextra 6864581 6864602 -22140054 + AT_rich Low_complexity Low_complexity 1 21 0 8 637 3300 44 49 0 chrUextra 6864961 6865413 -22139243 - PROTOP_A DNA P 0 1105 632 8 637 799 248 20 7 chrUextra 6866446 6866751 -22137905 + CT-rich Low_complexity Low_complexity 1 308 0 8 637 201 302 0 0 chrUextra 6866759 6866802 -22137854 + polypyrimidine Low_complexity Low_complexity 4 46 0 8 637 824 192 32 0 chrUextra 6866805 6866992 -22137664 - Gypsy5_I LTR Gypsy -1953 4556 4364 8 637 1100 207 22 11 chrUextra 6867002 6867275 -22137381 - Gypsy5_I LTR Gypsy -2612 3897 3622 8 637 2459 208 50 29 chrUextra 6867375 6868199 -22136457 + SAR_DM Satellite Satellite 1 841 -203 8 637 6895 19 0 1 chrUextra 6868306 6869137 -22135519 - DMRT1A LINE R1 -2519 2664 1835 8 637 777 0 0 0 chrUextra 6869237 6869326 -22135330 - Gypsy2_LTR LTR Gypsy -264 89 1 8 637 6483 0 0 0 chrUextra 6869326 6870068 -22134588 - Gypsy2_I LTR Gypsy 0 6135 5394 8 637 3284 183 14 24 chrUextra 6870170 6870999 -22133657 + SAR_DM Satellite Satellite 195 1015 -457 8 637 4313 101 167 4 chrUextra 6871101 6871930 -22132726 - TART LINE telomeric -6799 7678 6783 8 637 1824 45 62 0 chrUextra 6872030 6872273 -22132383 + TART_B1 LINE telomeric 3363 3620 -7034 8 637 4571 29 7 5 chrUextra 6872273 6872861 -22131795 + PROTOP_A DNA P 1 589 -516 8 637 3894 57 2 6 chrUextra 6872961 6873486 -22131170 + R1_DM LINE R1 89 611 -4745 8 637 1248 55 0 0 chrUextra 6873488 6873651 -22131005 + R1_DM LINE R1 1157 1319 -4037 8 637 4291 21 0 2 chrUextra 6873892 6874414 -22130242 + DIVER2_I LTR Pao 3627 4147 0 8 637 2417 39 3 7 chrUextra 6874414 6874723 -22129933 + DIVER2_LTR LTR Pao 1 308 -77 8 637 411 288 40 39 chrUextra 6874995 6875038 -22129618 + DM297_I LTR Gypsy 2576 2667 -3500 8 637 1544 9 24 0 chrUextra 6875038 6875251 -22129405 + TLD2 Unknown Unknown 1 218 0 8 637 411 288 40 39 chrUextra 6875251 6875398 -22129258 + DM297_I LTR Gypsy 2668 2991 -3176 8 637 300 342 19 0 chrUextra 6875473 6875634 -22129022 + Gypsy7_I LTR Gypsy 2933 3096 -1888 8 637 285 0 0 75 chrUextra 6875754 6875794 -22128862 - NTS_DM Other Other -179 61 25 8 637 22 56 0 0 chrUextra 6875820 6875856 -22128800 + AT_rich Low_complexity Low_complexity 1 36 0 8 637 255 125 0 0 chrUextra 6875869 6875909 -22128747 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 637 246 150 0 0 chrUextra 6875952 6875992 -22128664 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 637 246 150 0 0 chrUextra 6876044 6876084 -22128572 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 637 24 53 0 0 chrUextra 6876089 6876127 -22128529 + AT_rich Low_complexity Low_complexity 1 38 0 8 637 246 150 0 0 chrUextra 6876136 6876176 -22128480 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 637 27 29 0 0 chrUextra 6876181 6876215 -22128441 + AT_rich Low_complexity Low_complexity 1 34 0 8 637 246 150 0 0 chrUextra 6876326 6876366 -22128290 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 637 246 150 0 0 chrUextra 6876418 6876458 -22128198 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 637 27 29 0 0 chrUextra 6876463 6876497 -22128159 + AT_rich Low_complexity Low_complexity 1 34 0 8 637 21 0 0 0 chrUextra 6877230 6877251 -22127405 + AT_rich Low_complexity Low_complexity 1 21 0 8 637 5158 43 4 18 chrUextra 6877616 6878357 -22126299 - STALKER4_I LTR Gypsy -4790 1740 818 8 637 1796 176 3 3 chrUextra 6878547 6879117 -22125539 + SAR_DM Satellite Satellite 1 570 -545 8 637 685 124 0 0 chrUextra 6879105 6879226 -22125430 - ARS406_DM Unknown Unknown -232 121 1 8 637 3173 241 19 35 chrUextra 6879130 6880309 -22124347 + SAR_DM Satellite Satellite 1 1160 -208 8 637 704 26 34 34 chrUextra 6881340 6881459 -22123197 + NTS_DM Other Other 122 240 0 8 637 1651 38 17 17 chrUextra 6881459 6881699 -22122957 + NTS_DM Other Other 1 240 0 8 637 1672 34 17 17 chrUextra 6881699 6881938 -22122718 + NTS_DM Other Other 1 239 -1 8 637 1471 66 17 17 chrUextra 6881939 6882171 -22122485 + NTS_DM Other Other 1 232 -8 8 637 3130 179 50 11 chrUextra 6882275 6883076 -22121580 + SAR_DM Satellite Satellite 245 1076 -396 8 637 1915 33 25 0 chrUextra 6883203 6883448 -22121208 + DMCR1A LINE CR1 4220 4470 0 8 637 516 225 62 85 chrUextra 6883455 6883742 -22120914 - Gypsy8_LTR LTR Gypsy -5 299 1 8 637 1991 36 46 4 chrUextra 6883752 6884033 -22120623 + DMCR1A LINE CR1 4105 4397 -73 8 637 2006 249 57 9 chrUextra 6885102 6885766 -22118890 - Gypsy4_I LTR Gypsy -3565 2723 2028 8 637 473 304 62 43 chrUextra 6885995 6886799 -22117857 + DM176_I LTR Gypsy 1442 2263 -4321 8 637 6771 24 7 0 chrUextra 6886926 6887757 -22116899 - R1_DM LINE R1 -145 5211 4375 8 637 269 231 105 65 chrUextra 6887973 6888126 -22116530 + MDG1_I LTR Gypsy 1304 1462 -5134 8 637 912 214 109 17 chrUextra 6888240 6888618 -22116038 + MDG1_I LTR Gypsy 1661 2144 -4452 8 637 238 170 19 0 chrUextra 6888618 6888671 -22115985 + DMLTR5 LTR Gypsy 1 54 -212 8 637 3380 183 17 19 chrUextra 6888788 6889619 -22115037 - SAR_DM Satellite Satellite -259 1213 385 8 637 5093 2 2 2 chrUextra 6889719 6890305 -22114351 - R2_DM LINE R2 -1724 1883 1298 8 637 2026 20 0 4 chrUextra 6890303 6890550 -22114106 - R2_DM LINE R2 -2029 1578 1333 8 637 693 103 241 0 chrUextra 6890938 6891083 -22113573 + FB4_DM DNA Tc1 3 182 -3907 8 637 250 33 0 0 chrUextra 6891091 6891121 -22113535 - Baggins1 LINE LOA -697 4756 4727 8 637 3086 194 18 20 chrUextra 6891581 6892412 -22112244 - SAR_DM Satellite Satellite -264 1208 380 8 637 1092 139 64 5 chrUextra 6892949 6893152 -22111504 + DNAREP1_DM LINE Penelope 22 236 -358 8 637 212 0 0 35 chrUextra 6893182 6893211 -22111445 + (TAA)n Simple_repeat Simple_repeat 2 29 0 8 637 3418 168 11 15 chrUextra 6893444 6894246 -22110410 + SAR_DM Satellite Satellite 278 1076 -396 8 637 259 78 19 56 chrUextra 6894220 6894274 -22110382 - XDMR_DM Unknown Unknown -9 351 300 8 637 6465 34 25 0 chrUextra 6894374 6895205 -22109451 - MDG1_I LTR Gypsy -3411 3185 2334 8 637 5966 24 6 48 chrUextra 6895305 6896136 -22108520 + BATUMI_I LTR Pao 1900 2695 -5268 8 637 2566 205 45 52 chrUextra 6896236 6897066 -22107590 - TAHRE LINE telomeric -2550 7913 7090 8 637 2096 59 78 35 chrUextra 6897167 6897533 -22107123 + DM176_LTR LTR Gypsy 113 480 -27 8 637 3399 26 26 11 chrUextra 6897533 6897998 -22106658 + DM176_I LTR Gypsy 1 472 -5948 8 637 4754 94 73 37 chrUextra 6898098 6898929 -22105727 - Gypsy12_I LTR Gypsy -4321 1225 365 8 637 3658 33 2 2 chrUextra 6899029 6899489 -22105167 - CIRCE LINE Composite -364 5992 5533 8 637 614 326 51 46 chrUextra 6899961 6900489 -22104167 - Gypsy4_I LTR Gypsy -2913 3508 2674 8 637 1467 28 24 0 chrUextra 6900489 6900702 -22103954 - TLD2 Unknown Unknown 0 218 1 8 637 614 326 51 46 chrUextra 6900702 6900791 -22103865 - Gypsy4_I LTR Gypsy -2913 2673 2530 8 637 3225 186 22 20 chrUextra 6900893 6901721 -22102935 + SAR_DM Satellite Satellite 282 1110 -362 8 637 6491 10 51 13 chrUextra 6901821 6902643 -22102013 + DOC LINE Jockey 252 1104 -3621 8 637 3293 3 0 0 chrUextra 6903681 6904071 -22100585 - QUASIMODO_LTR LTR Gypsy -268 390 1 8 637 2804 31 3 0 chrUextra 6904151 6904511 -22100145 - NINJA_I LTR Pao -1656 4355 3995 8 637 2706 24 0 0 chrUextra 6904630 6904961 -22099695 - R1_DM LINE R1 -2162 3194 2864 8 637 241 32 0 0 chrUextra 6904961 6904992 -22099664 + CIRCE LINE Composite 4950 4980 -1376 8 637 608 42 10 31 chrUextra 6905344 6905441 -22099215 + CIRCE LINE Composite 4981 5075 -1281 8 637 4559 13 0 0 chrUextra 6907401 6907941 -22096715 - STALKER4_I LTR Gypsy -2342 4188 3649 8 637 551 0 134 3 chrUextra 6907941 6908231 -22096425 + (TA)n Simple_repeat Simple_repeat 1 328 0 8 637 3385 154 132 10 chrUextra 6908331 6909157 -22095499 - TART LINE telomeric -4600 9877 8951 8 637 248 133 22 0 chrUextra 6909360 6909405 -22095251 - DM176_LTR LTR Gypsy -238 269 224 8 637 1036 95 3 35 chrUextra 6909511 6909703 -22094953 + STALKER4_LTR LTR Gypsy 248 399 -3 8 637 301 45 14 69 chrUextra 6909786 6909858 -22094798 + (TAAA)n Simple_repeat Simple_repeat 1 68 0 8 637 965 205 4 4 chrUextra 6909866 6910091 -22094565 + Stalker2_I LTR Gypsy 291 515 -6887 8 637 6673 20 0 1 chrUextra 6910191 6911019 -22093637 - ROO_I LTR Pao -3232 5024 4198 8 637 1172 179 84 25 chrUextra 6911304 6911624 -22093032 - Gypsy12_LTR LTR Gypsy -840 1496 1158 8 637 345 230 31 98 chrUextra 6911636 6911829 -22092827 - Gypsy12_LTR LTR Gypsy -1258 1078 899 8 637 572 11 0 137 chrUextra 6912054 6912259 -22092397 + (TAAAAA)n Simple_repeat Simple_repeat 2 178 0 8 637 304 181 66 0 chrUextra 6913471 6913637 -22091019 + T-rich Low_complexity Low_complexity 1 177 0 8 637 599 140 46 12 chrUextra 6913630 6913803 -22090853 + CT-rich Low_complexity Low_complexity 1 179 0 8 637 3467 181 8 12 chrUextra 6913911 6914741 -22089915 - SAR_DM Satellite Satellite -445 1027 201 8 637 3001 3 0 3 chrUextra 6914841 6915189 -22089467 - DMRT1B LINE R1 -4836 347 1 8 637 2192 19 0 0 chrUextra 6915406 6915671 -22088985 + R1_DM LINE R1 2559 2823 -2533 8 637 6798 5 23 0 chrUextra 6915771 6916601 -22088055 + DM297_I LTR Gypsy 4619 5467 -700 8 637 3320 179 14 16 chrUextra 6916713 6917508 -22087148 + SAR_DM Satellite Satellite 326 1118 -354 8 637 380 189 9 19 chrUextra 6917422 6917530 -22087126 - XDMR_DM Unknown Unknown 0 360 254 8 637 2406 264 27 19 chrUextra 6917636 6918461 -22086195 - G6_DM LINE Jockey -567 1475 645 8 637 5305 69 1 51 chrUextra 6918561 6919391 -22085265 + HETA LINE telomeric 590 1378 -4703 8 637 6352 40 24 4 chrUextra 6919491 6920321 -22084335 - TART LINE telomeric -3845 10632 9786 8 637 5344 14 0 11 chrUextra 6920421 6921251 -22083405 + DM412 LTR Gypsy 1 657 -6240 8 637 3478 183 7 17 chrUextra 6921351 6922181 -22082475 - SAR_DM Satellite Satellite -354 1118 297 8 637 3772 97 66 31 chrUextra 6922281 6923111 -22081545 + STALKER4_I LTR Gypsy 419 1338 -5192 8 637 351 49 65 16 chrUextra 6923660 6923722 -22080934 - HMSBEAGLE_I LTR Gypsy -6464 65 1 8 637 922 168 102 15 chrUextra 6923721 6923926 -22080730 - DMLTR5 LTR Gypsy 0 266 44 8 637 607 13 0 0 chrUextra 6924141 6924216 -22080440 + MAX_I LTR Pao 7840 7914 0 8 637 2729 12 0 0 chrUextra 6924216 6924537 -22080119 + MAX_LTR LTR Pao 1 321 0 8 637 2003 168 7 9 chrUextra 6924537 6924969 -22079687 + SAR_DM Satellite Satellite 432 862 -610 8 637 4961 46 60 0 chrUextra 6925071 6925848 -22078808 - PROTOP DNA P -3727 753 1 8 637 2864 192 21 22 chrUextra 6926001 6926831 -22077825 + SAR_DM Satellite Satellite 1 829 -354 8 637 3463 172 18 23 chrUextra 6926931 6927756 -22076900 + SAR_DM Satellite Satellite 371 1191 -281 8 637 7198 6 0 0 chrUextra 6927861 6928691 -22075965 - Gypsy6_I LTR Gypsy -4091 2921 2092 8 637 2420 7 7 3 chrUextra 6928791 6929093 -22075563 + ROVER-I_DM LTR Gypsy 6282 6584 0 8 637 2971 14 0 8 chrUextra 6929093 6929463 -22075193 + ROVER-LTR_DM LTR Gypsy 1 367 0 8 637 497 0 136 7 chrUextra 6929463 6929617 -22075039 + (TA)n Simple_repeat Simple_repeat 2 175 0 8 637 33 0 0 0 chrUextra 6929727 6929760 -22074896 + AT_rich Low_complexity Low_complexity 1 33 0 8 637 2975 46 56 0 chrUextra 6930137 6930551 -22074105 - PROTOP_A DNA P 0 1105 669 8 637 2195 111 18 31 chrUextra 6930651 6931481 -22073175 + DMSAT6 Satellite Satellite 1 819 -28 8 637 6548 8 32 0 chrUextra 6931581 6932411 -22072245 + DM176_I LTR Gypsy 1105 1961 -4459 8 637 2745 96 40 92 chrUextra 6932517 6933341 -22071315 - TART LINE telomeric -3814 10663 10309 8 637 3282 190 21 9 chrUextra 6934380 6935194 -22069462 - SAR_DM Satellite Satellite -425 1047 224 8 637 3293 193 11 11 chrUextra 6935299 6936128 -22068528 - SAR_DM Satellite Satellite -446 1026 198 8 637 884 26 0 0 chrUextra 6936228 6936342 -22068314 + R1_DM LINE R1 3973 4086 -1270 8 637 5593 32 4 4 chrUextra 6936340 6937057 -22067599 + R1_DM LINE R1 4559 5275 -81 8 637 3183 170 15 29 chrUextra 6937158 6937962 -22066694 + SAR_DM Satellite Satellite 326 1118 -354 8 637 414 167 9 29 chrUextra 6937876 6937981 -22066675 - XDMR_DM Unknown Unknown 0 360 258 8 637 920 66 5 18 chrUextra 6938090 6938482 -22066174 + RSP Satellite Satellite 1 387 0 8 637 908 63 6 19 chrUextra 6938553 6938906 -22065750 + RSP Satellite Satellite 1 348 0 8 637 7080 5 0 0 chrUextra 6939015 6939844 -22064812 + R1_DM LINE R1 2173 3001 -2355 8 637 6695 19 26 0 chrUextra 6939944 6940773 -22063883 - R1_DM LINE R1 -2338 3018 2168 8 637 3123 193 17 35 chrUextra 6940873 6941696 -22062960 + SAR_DM Satellite Satellite 1 808 -227 8 637 898 19 0 0 chrUextra 6941802 6941908 -22062748 + PROTOP_A DNA P 1000 1105 0 8 637 361 93 0 0 chrUextra 6941908 6941962 -22062694 - STALKER4_LTR LTR Gypsy -348 54 1 8 637 316 141 52 42 chrUextra 6941962 6942058 -22062598 - STALKER4_I LTR Gypsy 0 6530 6434 8 637 23 0 0 0 chrUextra 6942063 6942086 -22062570 + AT_rich Low_complexity Low_complexity 1 23 0 8 637 2966 26 5 3 chrUextra 6942086 6942467 -22062189 - IDEFIX_LTR LTR Gypsy 0 594 213 8 637 810 10 0 0 chrUextra 6942465 6942565 -22062091 - IDEFIX_LTR LTR Gypsy -494 100 1 8 637 519 45 0 0 chrUextra 6942565 6942631 -22062025 - IDEFIX_I LTR Gypsy 0 5628 5563 8 637 5483 5 0 0 chrUextra 6943660 6944307 -22060349 + PROTOP_A DNA P 459 1105 0 8 637 817 61 8 8 chrUextra 6944357 6944489 -22060167 + TRANSIB4 DNA Transib 1 132 -2478 8 637 2360 115 24 23 chrUextra 6944589 6945418 -22059238 + DMSAT6 Satellite Satellite 1 829 -97 8 637 372 286 70 70 chrUextra 6945539 6945956 -22058700 + BLASTOPIA_I LTR Gypsy 2180 2596 -1885 8 637 311 325 0 0 chrUextra 6945969 6946095 -22058561 + Invader2_I LTR Gypsy 2624 2749 -1843 8 79 3036 193 17 25 chrUextra 6946453 6947261 -22057395 - SAR_DM Satellite Satellite -300 1172 371 8 638 2612 22 0 0 chrUextra 6947376 6947693 -22056963 - DMRT1B LINE R1 -1149 4034 3718 8 638 4335 19 0 0 chrUextra 6947687 6948205 -22056451 - DMRT1B LINE R1 -1572 3611 3094 8 638 2445 20 3 10 chrUextra 6948305 6948608 -22056048 - BATUMI_I LTR Pao -1991 5972 5672 8 638 4530 9 0 0 chrUextra 6948606 6949134 -22055522 - BATUMI_I LTR Pao -2648 5315 4788 8 638 1512 45 0 0 chrUextra 6949234 6949458 -22055198 + (CTATT)n Simple_repeat Simple_repeat 1 224 0 8 638 1479 81 7 7 chrUextra 6949469 6950004 -22054652 + (CTATT)n Simple_repeat Simple_repeat 1 535 0 8 638 251 85 21 0 chrUextra 6950016 6950063 -22054593 + (CTATT)n Simple_repeat Simple_repeat 2 49 0 8 638 559 193 11 6 chrUextra 6950183 6950360 -22054296 + (TTATG)n Simple_repeat Simple_repeat 2 179 0 8 638 2295 4 0 0 chrUextra 6950375 6950642 -22054014 + MDG3_LTR LTR Gypsy 1 267 0 8 638 3009 0 0 3 chrUextra 6950641 6950992 -22053664 + MDG3_I LTR Gypsy 1 350 -4636 8 638 3017 23 2 111 chrUextra 6951092 6951578 -22053078 - PROTOP_A DNA P -476 629 197 8 638 2266 83 0 9 chrUextra 6951579 6951920 -22052736 + R1_DM LINE R1 720 1057 -4299 8 638 2640 208 84 10 chrUextra 6952021 6952831 -22051825 - SAR_DM Satellite Satellite -261 1211 342 8 638 743 100 0 0 chrUextra 6952950 6953070 -22051586 - ARS406_DM Unknown Unknown -233 120 1 8 638 3206 184 35 12 chrUextra 6952977 6953779 -22050877 + SAR_DM Satellite Satellite 195 1014 -458 8 638 3226 195 10 17 chrUextra 6953879 6954708 -22049948 + SAR_DM Satellite Satellite 1 823 -227 8 638 430 111 25 0 chrUextra 6954808 6954889 -22049767 - SAR_DM Satellite Satellite -851 621 539 8 638 987 190 42 20 chrUextra 6954900 6955636 -22049020 - SAR_DM Satellite Satellite -683 751 1 8 638 392 222 99 0 chrUextra 6955884 6956046 -22048610 + (CAAGA)n Simple_repeat Simple_repeat 3 180 0 8 638 326 239 98 0 chrUextra 6955959 6956122 -22048534 + (CAGAA)n Simple_repeat Simple_repeat 1 179 0 8 638 260 196 82 41 chrUextra 6956106 6956276 -22048380 + (CAGA)n Simple_repeat Simple_repeat 2 178 0 8 638 248 185 89 36 chrUextra 6956213 6956381 -22048275 + (TAGA)n Simple_repeat Simple_repeat 4 180 0 8 638 339 225 106 0 chrUextra 6956402 6956562 -22048094 + (CAAGA)n Simple_repeat Simple_repeat 4 180 0 8 638 876 53 0 0 chrUextra 6956683 6956796 -22047860 - CIRCE LINE Composite -5271 1085 973 8 638 3691 68 0 50 chrUextra 6956938 6957493 -22047163 - CIRCE LINE Composite -5386 970 444 8 638 4275 88 88 14 chrUextra 6957594 6958422 -22046234 - Gypsy12_I LTR Gypsy -487 5059 4112 8 638 1092 139 64 5 chrUextra 6959617 6959820 -22044836 + DNAREP1_DM LINE Penelope 22 236 -358 8 638 212 0 0 35 chrUextra 6959850 6959879 -22044777 + (TAA)n Simple_repeat Simple_repeat 2 29 0 8 638 6819 19 10 0 chrUextra 6960378 6961205 -22043451 + R1_DM LINE R1 1765 2599 -2757 8 638 4438 135 16 0 chrUextra 6961306 6962134 -22042522 + TART_B1 LINE telomeric 1105 1945 -8709 8 638 6358 21 69 1 chrUextra 6962238 6963062 -22041594 - R1_DM LINE R1 -1268 4088 3209 8 638 6930 13 1 0 chrUextra 6963163 6963990 -22040666 - DMRT1B LINE R1 -2319 2864 2037 8 638 1503 0 0 0 chrUextra 6964090 6964257 -22040399 + (CACAA)n Simple_repeat Simple_repeat 1 167 0 8 638 5476 8 0 9 chrUextra 6964258 6964918 -22039738 + DMRT1B LINE R1 2760 3413 -1770 8 638 2872 40 45 0 chrUextra 6965018 6965392 -22039264 + DOC3_DM LINE Jockey 2307 2697 -2043 8 638 1516 35 5 0 chrUextra 6965390 6965589 -22039067 + DOC3_DM LINE Jockey 4540 4739 -1 8 638 939 142 142 28 chrUextra 6965550 6965839 -22038817 - Gypsy12A_LTR LTR Gypsy -532 1748 1427 8 638 747 0 0 0 chrUextra 6966691 6966774 -22037882 + (CAAGA)n Simple_repeat Simple_repeat 3 85 0 8 638 4863 20 28 17 chrUextra 6968730 6969558 -22035098 + ACCORD2_I LTR Gypsy 5156 6102 -1110 8 638 6754 17 13 0 chrUextra 6969658 6970486 -22034170 + DOC2_DM LINE Jockey 1385 2223 -2570 8 638 407 168 0 21 chrUextra 6970610 6970707 -22033949 + HETA LINE telomeric 4350 4444 -1637 8 638 1079 200 40 40 chrUextra 6970703 6971031 -22033625 + TAHRE LINE telomeric 9356 9683 -780 8 638 4598 157 8 6 chrUextra 6971514 6972341 -22032315 - Gypsy5_I LTR Gypsy -2428 4081 3253 8 638 6930 20 2 0 chrUextra 6972442 6973270 -22031386 + DIVER2_I LTR Pao 3269 4098 -49 8 638 3134 194 15 20 chrUextra 6973370 6974182 -22030474 + SAR_DM Satellite Satellite 438 1245 -227 8 638 684 63 0 0 chrUextra 6974103 6974198 -22030458 - ARS406_DM Unknown Unknown -164 189 95 8 638 4102 48 78 5 chrUextra 6974298 6975126 -22029530 + IDEFIX_I LTR Gypsy 1009 1897 -3731 8 638 366 22 0 0 chrUextra 6976008 6976053 -22028603 + PROTOP_B DNA P 1 45 -1108 8 638 4347 29 104 0 chrUextra 6976154 6976982 -22027674 - R1_DM LINE R1 -1719 3637 2724 8 638 23 68 0 0 chrUextra 6977209 6977253 -22027403 + AT_rich Low_complexity Low_complexity 1 44 0 8 638 28 71 0 0 chrUextra 6977299 6977355 -22027301 + AT_rich Low_complexity Low_complexity 1 56 0 8 638 2954 44 14 19 chrUextra 6977494 6977910 -22026746 - PROTOP_A DNA P -592 513 100 8 638 6778 25 0 4 chrUextra 6978010 6978838 -22025818 - R1_DM LINE R1 -2592 2764 1940 8 638 1149 328 9 14 chrUextra 6978938 6979582 -22025074 - Invader6_I LTR Gypsy -1698 2401 1761 8 638 590 305 0 0 chrUextra 6979579 6979766 -22024890 - Invader6_I LTR Gypsy -2189 1910 1724 8 638 2811 211 10 16 chrUextra 6979866 6980693 -22023963 + SAR_DM Satellite Satellite 1 822 -227 8 638 592 272 37 56 chrUextra 6981014 6981283 -22023373 - TV1I LTR Gypsy -5118 942 669 8 638 1614 100 0 27 chrUextra 6981366 6981622 -22023034 - Gypsy12_I LTR Gypsy -4442 1104 856 8 638 3249 186 17 21 chrUextra 6981725 6982550 -22022106 + SAR_DM Satellite Satellite 337 1158 -314 8 638 4645 8 3 2 chrUextra 6982650 6983240 -22021416 + DM176_I LTR Gypsy 5418 6008 -412 8 638 1672 41 111 28 chrUextra 6983226 6983478 -22021178 + ROO_I LTR Pao 4199 4471 -3785 8 638 23 0 0 0 chrUextra 6983578 6983601 -22021055 + AT_rich Low_complexity Low_complexity 1 23 0 8 638 1083 256 52 85 chrUextra 6983603 6984390 -22020266 + TOM_I LTR Gypsy 1 761 -5351 8 638 1235 19 0 0 chrUextra 6984506 6984666 -22019990 + G2_DM LINE Jockey 2937 3096 -6 8 638 4012 39 36 82 chrUextra 6984665 6985334 -22019322 + Invader2_I LTR Gypsy 700 1337 -3255 8 638 917 52 29 0 chrUextra 6985435 6985571 -22019085 - PROTOP_A DNA P -547 558 419 8 638 5681 7 10 0 chrUextra 6985571 6986262 -22018394 - PROTOP_A DNA P 0 1105 408 8 638 2586 99 144 45 chrUextra 6986362 6987108 -22017548 - BATUMI_I LTR Pao -6384 1579 760 8 638 3169 199 8 9 chrUextra 6987319 6988115 -22016541 - SAR_DM Satellite Satellite -396 1076 282 8 638 6006 65 11 8 chrUextra 6988219 6989046 -22015610 - BATUMI_I LTR Pao -3773 4190 3362 8 638 359 138 92 0 chrUextra 6989294 6989359 -22015297 + G3_DM LINE Jockey 509 579 -4026 8 638 6820 24 0 0 chrUextra 6990074 6990902 -22013754 - R1_DM LINE R1 -2666 2690 1863 8 638 365 245 0 9 chrUextra 6991002 6991113 -22013543 - SAR_DM Satellite Satellite -1171 301 192 8 638 1182 64 6 0 chrUextra 6991018 6991190 -22013466 + ARS406_DM Unknown Unknown 1 173 -180 8 638 1795 165 13 10 chrUextra 6991210 6991596 -22013060 - SAR_DM Satellite Satellite -614 858 472 8 638 1101 150 5 5 chrUextra 6991616 6991830 -22012826 - SAR_DM Satellite Satellite -614 858 645 8 638 6438 5 1 8 chrUextra 6991930 6992756 -22011900 + STALKER4_I LTR Gypsy 5695 6514 -16 8 638 6401 16 6 1 chrUextra 6992858 6993661 -22010995 - QUASIMODO_I LTR Gypsy -4574 1486 680 8 638 3172 226 21 6 chrUextra 6994714 6995541 -22009115 + ROVER-I_DM LTR Gypsy 1952 2790 -3794 8 638 293 200 30 40 chrUextra 6995642 6995741 -22008915 + XDMR_DM Unknown Unknown 254 351 -9 8 638 3229 183 11 19 chrUextra 6995664 6996464 -22008192 - SAR_DM Satellite Satellite -353 1119 326 8 638 3465 0 0 2 chrUextra 6996588 6996991 -22007665 - STALKER4_LTR LTR Gypsy 0 402 1 8 638 2976 17 10 0 chrUextra 6996991 6997396 -22007260 - STALKER4_I LTR Gypsy 0 6530 6122 8 638 1565 11 0 0 chrUextra 6997496 6997681 -22006975 - Gypsy12_LTR LTR Gypsy -2151 185 1 8 638 228 132 0 0 chrUextra 6997681 6997719 -22006937 - Gypsy6A_LTR LTR Gypsy -12 408 371 8 638 1894 38 4 0 chrUextra 6997718 6997956 -22006700 - Gypsy6A_LTR LTR Gypsy -181 239 1 8 638 365 143 0 0 chrUextra 6997956 6998013 -22006643 + DNAREP1_DM LINE Penelope 59 115 -479 8 638 3182 175 55 13 chrUextra 6998424 6999248 -22005408 + SAR_DM Satellite Satellite 180 1037 -435 8 638 2237 90 22 35 chrUextra 6999353 7000000 -22004656 + DMSAT6 Satellite Satellite 1 638 -65 8 638 931 98 11 17 chrUextra 7000000 7000177 -22004479 + DMSAT6 Satellite Satellite 200 375 -95 8 638 1802 0 0 0 chrUextra 7000277 7000489 -22004167 - Copia_LTR LTR Copia -64 212 1 8 638 370 316 51 53 chrUextra 7000650 7001104 -22003552 - HMSBEAGLE_I LTR Gypsy -750 5779 5327 8 638 4913 5 5 0 chrUextra 7001204 7001794 -22002862 + STALKER4_I LTR Gypsy 2036 2628 -3902 8 638 1969 8 0 0 chrUextra 7001791 7002031 -22002625 + STALKER4_I LTR Gypsy 3052 3291 -3239 8 638 7116 1 2 2 chrUextra 7002131 7002958 -22001698 - SSU-rRNA_Dme rRNA rRNA -328 1667 841 8 638 22 0 0 0 chrUextra 7003118 7003140 -22001516 + AT_rich Low_complexity Low_complexity 1 22 0 8 638 575 336 41 26 chrUextra 7004190 7004655 -22000001 - NOMAD_I LTR Gypsy 0 6572 6101 8 638 7261 1 0 0 chrUextra 7004912 7005739 -21998917 + MAX_I LTR Pao 3679 4505 -3409 8 638 786 90 0 0 chrUextra 7005841 7005963 -21998693 - ARS406_DM Unknown Unknown -231 122 1 8 638 3354 181 9 11 chrUextra 7005867 7006666 -21997990 + SAR_DM Satellite Satellite 192 988 -484 8 638 1414 196 24 22 chrUextra 7006766 7007179 -21997477 + SAR_DM Satellite Satellite 663 1076 -396 8 638 1732 171 25 12 chrUextra 7007190 7007593 -21997063 + SAR_DM Satellite Satellite 543 950 -522 8 638 706 148 30 61 chrUextra 7008088 7008253 -21996403 - Gypsy5_LTR LTR Gypsy -194 236 77 8 638 583 73 0 0 chrUextra 7008257 7008339 -21996317 - Jockey2 LINE Jockey -3346 82 1 8 638 714 20 178 0 chrUextra 7010273 7010374 -21994282 + PROTOP_B DNA P 1 119 -1034 8 638 2022 101 182 38 chrUextra 7010474 7010874 -21993782 + TART_B1 LINE telomeric 3728 4185 -6469 8 638 2802 62 54 0 chrUextra 7010874 7011261 -21993395 + TART LINE telomeric 1452 1859 -12618 8 638 356 41 41 0 chrUextra 7011252 7011301 -21993355 + TART LINE telomeric 2045 2095 -12382 8 638 287 127 0 18 chrUextra 7011402 7011458 -21993198 + ARS406_DM Unknown Unknown 135 189 -164 8 638 3001 188 36 27 chrUextra 7011414 7012228 -21992428 - SAR_DM Satellite Satellite -261 1211 391 8 638 5605 1 0 0 chrUextra 7012328 7012975 -21991681 - R2_DM LINE R2 -2400 1207 561 8 638 1498 6 6 0 chrUextra 7012974 7013155 -21991501 - LSU-rRNA_Dme rRNA rRNA -1547 2353 2172 8 638 3079 185 33 17 chrUextra 7013255 7014071 -21990585 + SAR_DM Satellite Satellite 1 828 -208 8 638 2474 41 3 0 chrUextra 7014415 7014731 -21989925 - PROTOP DNA P 0 4480 4164 8 638 1094 72 17 0 chrUextra 7014733 7015005 -21989651 - PROTOP_A DNA P -3723 757 573 8 638 3351 177 22 19 chrUextra 7015109 7015932 -21988724 + SAR_DM Satellite Satellite 294 1118 -354 8 638 6665 15 0 10 chrUextra 7016036 7016860 -21987796 - Gypsy4_I LTR Gypsy -5331 957 142 8 638 2775 177 10 5 chrUextra 7016963 7017577 -21987079 + SAR_DM Satellite Satellite 230 846 -626 8 638 1857 5 0 0 chrUextra 7017574 7017790 -21986866 + DM1731_I LTR Copia 2068 2283 -1693 8 638 246 150 0 0 chrUextra 7017891 7017931 -21986725 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 638 238 150 0 0 chrUextra 7017983 7018023 -21986633 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 638 246 150 0 0 chrUextra 7018075 7018115 -21986541 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 638 238 150 0 0 chrUextra 7018262 7018302 -21986354 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 638 235 175 0 0 chrUextra 7018354 7018394 -21986262 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 638 246 150 0 0 chrUextra 7018446 7018486 -21986170 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 638 226 175 0 0 chrUextra 7018538 7018578 -21986078 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 638 238 150 0 0 chrUextra 7018630 7018670 -21985986 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 638 257 287 58 84 chrUextra 7018865 7019055 -21985601 + Invader1_LTR LTR Gypsy 184 368 -55 8 638 6943 7 0 7 chrUextra 7019744 7020571 -21984085 + STALKER4_I LTR Gypsy 3970 4790 -1740 8 638 244 128 0 21 chrUextra 7020830 7020878 -21983778 - HMSBEAGLE_I LTR Gypsy -6308 221 175 8 638 244 128 0 21 chrUextra 7021104 7021152 -21983504 - HMSBEAGLE_I LTR Gypsy -6308 221 175 8 638 351 49 65 16 chrUextra 7021174 7021236 -21983420 - HMSBEAGLE_I LTR Gypsy -6464 65 1 8 638 893 173 102 15 chrUextra 7021235 7021440 -21983216 - DMLTR5 LTR Gypsy 0 266 44 8 638 1737 47 172 0 chrUextra 7022037 7022292 -21982364 + PROTOP DNA P 1 299 -4181 8 638 776 34 185 0 chrUextra 7022279 7022425 -21982231 + PROTOP_B DNA P 520 692 -461 8 638 2628 201 70 14 chrUextra 7022527 7023352 -21981304 - SAR_DM Satellite Satellite -318 1154 284 8 638 6597 17 51 4 chrUextra 7023452 7024279 -21980377 - DMRT1B LINE R1 -2686 2497 1632 8 638 575 142 0 0 chrUextra 7024379 7024485 -21980171 - ARS406_DM Unknown Unknown -247 106 1 8 638 3389 194 6 10 chrUextra 7024392 7025206 -21979450 + SAR_DM Satellite Satellite 195 1005 -467 8 638 5290 19 12 0 chrUextra 7025492 7026133 -21978523 - LSU-rRNA_Dme rRNA rRNA 0 3900 3252 8 638 894 130 0 17 chrUextra 7026880 7027060 -21977596 + (GAGAA)n Simple_repeat Simple_repeat 4 180 0 8 638 6972 5 4 6 chrUextra 7027160 7027987 -21976669 - DM1731_I LTR Copia -146 3830 3006 8 638 3814 129 6 6 chrUextra 7028087 7028899 -21975757 + BATUMI_I LTR Pao 3862 4749 -3165 8 638 267 233 0 0 chrUextra 7029016 7029076 -21975580 + (TCCA)n Simple_repeat Simple_repeat 2 61 0 8 638 1031 134 0 6 chrUextra 7029076 7029256 -21975400 + (TA)n Simple_repeat Simple_repeat 2 180 0 8 638 2990 14 0 5 chrUextra 7029257 7029626 -21975030 + ROVER-LTR_DM LTR Gypsy 1 367 0 8 638 1756 5 0 9 chrUextra 7029626 7029840 -21974816 + ROVER-I_DM LTR Gypsy 1 212 -6372 8 638 1985 167 10 7 chrUextra 7029946 7030765 -21973891 + SAR_DM Satellite Satellite 1 821 -679 8 638 2603 69 0 6 chrUextra 7030866 7031231 -21973425 + BATUMI_I LTR Pao 7601 7963 0 8 638 3542 47 0 0 chrUextra 7031239 7031690 -21972966 + BATUMI_I LTR Pao 4630 5080 -2883 8 638 4932 18 69 1 chrUextra 7032718 7033543 -21971113 + FW_DM LINE Jockey 3366 4246 -446 8 638 972 106 34 78 chrUextra 7033644 7033849 -21970807 - ACCORD2_I LTR Gypsy -7016 196 1 8 638 593 196 48 113 chrUextra 7033849 7034079 -21970577 - ACCORD2_LTR LTR Gypsy 0 215 1 8 638 788 127 191 89 chrUextra 7034079 7034304 -21970352 + IDEFIX_LTR LTR Gypsy 347 594 0 8 638 513 139 11 11 chrUextra 7034383 7034470 -21970186 - PROTOP_B DNA P -957 196 110 8 638 6204 30 1 1 chrUextra 7034570 7035396 -21969260 - IDEFIX_I LTR Gypsy -246 5382 4557 8 638 2610 0 0 0 chrUextra 7035496 7035792 -21968864 - DMRT1B LINE R1 -4814 369 74 8 638 4055 25 9 0 chrUextra 7035794 7036322 -21968334 - IDEFIX_I LTR Gypsy -496 5132 4600 8 638 3203 199 6 9 chrUextra 7036453 7037248 -21967408 - SAR_DM Satellite Satellite -396 1076 284 8 638 1744 122 336 41 chrUextra 7037348 7037976 -21966680 + Gypsy12_I LTR Gypsy 92 976 -4570 8 638 385 281 0 0 chrUextra 7037983 7038105 -21966551 + DM297_I LTR Gypsy 3337 3458 -2709 8 638 349 95 14 87 chrUextra 7038105 7038174 -21966482 + Gypsy12_LTR LTR Gypsy 1 64 -2272 8 638 6659 13 31 11 chrUextra 7038274 7039100 -21965556 - CIRCE LINE Composite -1997 4359 3517 8 638 501 240 0 8 chrUextra 7040146 7040276 -21964380 + IDEFIX_I LTR Gypsy 926 1054 -4574 8 638 615 0 0 0 chrUextra 7040293 7040364 -21964292 + DOC3_DM LINE Jockey 1 71 -4669 8 638 2884 40 33 2 chrUextra 7040362 7040758 -21963898 + DOC3_DM LINE Jockey 643 1050 -3690 8 638 1600 24 14 19 chrUextra 7040740 7040952 -21963704 + DOC3_DM LINE Jockey 1512 1722 -3018 8 638 7129 8 0 0 chrUextra 7041052 7041878 -21962778 - Invader1_I LTR Gypsy -1377 1809 984 8 638 3099 226 5 8 chrUextra 7041980 7042802 -21961854 - DM412 LTR Gypsy -573 6324 5506 8 638 596 127 9 0 chrUextra 7042904 7043014 -21961642 - ARS406_DM Unknown Unknown -242 111 1 8 638 3136 193 11 14 chrUextra 7042922 7043730 -21960926 + SAR_DM Satellite Satellite 195 1000 -472 8 638 2486 88 32 22 chrUextra 7043830 7044653 -21960003 + DMSAT6 Satellite Satellite 1 831 -74 8 638 7083 2 0 2 chrUextra 7044756 7045582 -21959074 - HETA LINE telomeric -3666 2415 1592 8 638 1626 47 5 0 chrUextra 7045682 7045893 -21958763 - Baggins1 LINE LOA -352 5101 4890 8 638 2145 53 25 12 chrUextra 7046186 7046508 -21958148 - Jockey2 LINE Jockey 0 3428 3103 8 638 2567 220 13 56 chrUextra 7046609 7047360 -21957296 - Gypsy12_LTR LTR Gypsy -1617 719 1 8 638 532 56 0 0 chrUextra 7047362 7047434 -21957222 - Gypsy12_I LTR Gypsy -2 5544 5473 8 638 2821 33 0 8 chrUextra 7047534 7047905 -21956751 + CIRCE LINE Composite 4613 4980 -1376 8 638 1682 41 5 5 chrUextra 7048095 7048314 -21956342 - R1_DM LINE R1 -4037 1319 1101 8 638 256 120 0 20 chrUextra 7048309 7048360 -21956296 - R1_DM LINE R1 -4921 435 386 8 638 869 9 0 9 chrUextra 7048460 7048567 -21956089 - NTS_DM Other Other -134 106 1 8 638 1745 17 17 17 chrUextra 7048567 7048807 -21955849 - NTS_DM Other Other 0 240 1 8 638 1803 17 17 13 chrUextra 7048807 7049046 -21955610 - NTS_DM Other Other 0 240 1 8 638 1781 13 17 17 chrUextra 7049046 7049286 -21955370 - NTS_DM Other Other 0 240 1 8 638 415 51 0 0 chrUextra 7049386 7049445 -21955211 + Gypsy12_I LTR Gypsy 5488 5546 0 8 638 2189 194 17 42 chrUextra 7049444 7049986 -21954670 + Gypsy12_LTR LTR Gypsy 1 528 -1808 8 638 275 287 0 11 chrUextra 7050085 7050180 -21954476 + Gypsy12_LTR LTR Gypsy 679 772 -1564 8 638 700 246 107 11 chrUextra 7050328 7050599 -21954057 - BS LINE Jockey -1688 3438 3142 8 638 1082 239 7 7 chrUextra 7050855 7051137 -21953519 - BS LINE Jockey -2328 2798 2517 8 638 207 0 0 0 chrUextra 7051238 7051261 -21953395 + (TTA)n Simple_repeat Simple_repeat 3 25 0 8 638 751 62 102 0 chrUextra 7051261 7051389 -21953267 - MDG1_I LTR Gypsy -1721 4875 4735 8 638 1042 20 0 0 chrUextra 7051394 7051540 -21953116 - FW_DM LINE Jockey 0 4692 4547 8 638 414 124 185 50 chrUextra 7051534 7051628 -21953028 - MDG1_LTR LTR Gypsy -241 201 87 8 638 1272 7 0 0 chrUextra 7051628 7051773 -21952883 + (TTA)n Simple_repeat Simple_repeat 3 147 0 8 638 623 128 104 0 chrUextra 7051773 7051898 -21952758 - MDG1_I LTR Gypsy -1721 4875 4738 8 638 941 62 0 7 chrUextra 7051908 7052055 -21952601 - FW_DM LINE Jockey 0 4692 4547 8 638 2890 211 29 11 chrUextra 7052164 7052962 -21951694 - SAR_DM Satellite Satellite -519 812 1 8 638 2110 237 44 65 chrUextra 7053090 7053916 -21950740 - Gypsy12_LTR LTR Gypsy -1301 1035 228 8 638 2503 185 7 20 chrUextra 7054016 7054047 -21950609 + SAR_DM Satellite Satellite 1 37 -1271 8 638 1073 81 0 0 chrUextra 7054047 7054208 -21950448 - ARS406_DM Unknown Unknown -164 189 29 8 638 2503 185 7 20 chrUextra 7054208 7054837 -21949819 + SAR_DM Satellite Satellite 38 810 -498 8 638 6741 13 40 5 chrUextra 7054942 7055768 -21948888 - Gypsy2_I LTR Gypsy -3493 2642 1788 8 638 6506 19 4 6 chrUextra 7055868 7056694 -21947962 + PROTOP_A DNA P 39 862 -243 8 638 6546 35 18 1 chrUextra 7056794 7057620 -21947036 - DMCR1A LINE CR1 -568 3902 3063 8 638 6764 19 1 5 chrUextra 7057720 7058546 -21946110 + R1_DM LINE R1 1913 2735 -2621 8 638 2336 25 0 0 chrUextra 7058647 7058928 -21945728 - PROTOP_A DNA P -824 281 1 8 638 2132 45 4 0 chrUextra 7058928 7059197 -21945459 + ROO_LTR LTR Pao 159 428 0 8 638 1515 48 7 4 chrUextra 7059197 7059471 -21945185 + (TTATA)n Simple_repeat Simple_repeat 1 274 0 8 638 3448 180 14 24 chrUextra 7059574 7060390 -21944266 - SAR_DM Satellite Satellite -511 808 1 8 638 725 42 0 0 chrUextra 7060498 7060593 -21944063 + ARS406_DM Unknown Unknown 95 189 -164 8 638 3079 201 12 20 chrUextra 7060511 7061324 -21943332 - SAR_DM Satellite Satellite -224 1248 442 8 638 882 0 0 0 chrUextra 7061424 7061522 -21943134 + (GAGAA)n Simple_repeat Simple_repeat 5 102 0 8 638 3328 36 17 2 chrUextra 7062407 7062829 -21941827 - ROO_LTR LTR Pao 0 428 1 8 638 26 50 0 0 chrUextra 7062864 7062904 -21941752 + AT_rich Low_complexity Low_complexity 1 40 0 8 638 39 50 0 0 chrUextra 7063075 7063135 -21941521 + AT_rich Low_complexity Low_complexity 1 60 0 8 638 511 16 0 0 chrUextra 7063276 7063337 -21941319 - Copia2_I LTR Copia -4101 61 1 8 638 1645 10 0 0 chrUextra 7063337 7063534 -21941122 - Copia2_LTR_DM LTR Copia 0 198 2 8 638 1488 18 0 0 chrUextra 7063534 7063754 -21940902 + (TTA)n Simple_repeat Simple_repeat 1 220 0 8 638 1060 81 19 0 chrUextra 7063775 7063935 -21940721 + Jockey2 LINE Jockey 3089 3251 -177 8 638 818 44 43 24 chrUextra 7063938 7064102 -21940554 + (TTA)n Simple_repeat Simple_repeat 2 168 0 8 638 2406 100 41 13 chrUextra 7064202 7065025 -21939631 - DMSAT6 Satellite Satellite -108 846 1 8 638 1067 154 28 16 chrUextra 7065148 7065399 -21939257 - SAR_DM Satellite Satellite -680 792 539 8 638 1110 183 19 6 chrUextra 7065410 7065927 -21938729 - SAR_DM Satellite Satellite -683 523 1 8 638 1904 4 0 90 chrUextra 7066052 7066320 -21938336 + DM176_LTR LTR Gypsy 40 283 -224 8 638 2020 20 16 0 chrUextra 7066321 7066574 -21938082 + DM176_LTR LTR Gypsy 251 507 0 8 638 1135 98 96 19 chrUextra 7066575 7066865 -21937791 - ZAM_I LTR Gypsy -6989 501 1 8 638 3419 60 72 3 chrUextra 7067142 7067802 -21936854 - PROTOP_A DNA P 0 1105 535 8 638 1216 182 10 24 chrUextra 7067902 7068200 -21936456 - HETA LINE telomeric -2333 3748 3455 8 638 2341 118 74 34 chrUextra 7068198 7068725 -21935931 - TART LINE telomeric -4425 10052 9505 8 638 4712 0 0 0 chrUextra 7068827 7069375 -21935281 + G2_DM LINE Jockey 2553 3100 -2 8 638 750 226 29 5 chrUextra 7069443 7069652 -21935004 + ROVER-I_DM LTR Gypsy 3937 4150 -2434 8 638 6655 30 0 1 chrUextra 7069752 7070577 -21934079 + R1_DM LINE R1 2625 3448 -1908 8 638 6611 6 1 1 chrUextra 7070677 7071502 -21933154 + DM297_I LTR Gypsy 888 1712 -4455 8 638 6691 23 0 0 chrUextra 7071602 7072425 -21932231 - FW_DM LINE Jockey -2961 1731 909 8 638 2864 177 10 10 chrUextra 7072527 7073352 -21931304 - SAR_DM Satellite Satellite -719 825 1 8 638 3200 182 22 21 chrUextra 7073454 7074266 -21930390 + SAR_DM Satellite Satellite 369 1181 -291 8 638 1745 70 50 40 chrUextra 7074377 7074675 -21929981 + HETRP_DM Satellite Satellite 656 956 -916 8 638 2858 37 7 24 chrUextra 7074787 7075198 -21929458 + HETRP_DM Satellite Satellite 13 416 -1456 8 638 1303 53 0 0 chrUextra 7075302 7075472 -21929184 + R1_DM LINE R1 1624 1793 -3563 8 638 1980 155 0 68 chrUextra 7075473 7075867 -21928789 + R1_DM LINE R1 310 676 -4680 8 638 1772 110 4 4 chrUextra 7075863 7076127 -21928529 + R1_DM LINE R1 1099 1362 -3994 8 638 2813 166 53 5 chrUextra 7076227 7076851 -21927805 - TART LINE telomeric -4874 9603 8950 8 638 1095 188 0 0 chrUextra 7076842 7077050 -21927606 - HETA LINE telomeric -2638 3443 3236 8 79 3299 189 15 16 chrUextra 7077153 7077977 -21926679 - SAR_DM Satellite Satellite -366 1106 284 8 639 4599 4 0 0 chrUextra 7078077 7078606 -21926050 + BS2 LINE Jockey 4193 4721 0 8 639 180 0 0 0 chrUextra 7078615 7078635 -21926021 + (A)n Simple_repeat Simple_repeat 1 20 0 8 639 2022 32 0 0 chrUextra 7078635 7078882 -21925774 + BATUMI_I LTR Pao 4075 4321 -3642 8 639 517 42 56 0 chrUextra 7079002 7079074 -21925582 - DM176_LTR LTR Gypsy -181 326 251 8 639 2190 11 0 78 chrUextra 7079075 7079382 -21925274 - DM176_LTR LTR Gypsy -224 283 1 8 639 229 161 51 0 chrUextra 7079382 7079490 -21925166 + MDG1_I LTR Gypsy 773 886 -5710 8 639 2161 53 71 0 chrUextra 7079504 7079827 -21924829 + MDG1_I LTR Gypsy 1193 1538 -5058 8 639 6669 28 10 1 chrUextra 7079927 7080752 -21923904 + R1_DM LINE R1 1393 2224 -3132 8 639 2777 174 15 24 chrUextra 7081777 7082450 -21922206 - SAR_DM Satellite Satellite -615 857 191 8 639 446 196 20 17 chrUextra 7082462 7082601 -21922055 - SAR_DM Satellite Satellite -396 1076 964 8 639 3327 164 24 42 chrUextra 7082708 7083518 -21921138 - SAR_DM Satellite Satellite -425 1047 253 8 639 2605 0 0 0 chrUextra 7083627 7083927 -21920729 - DOC LINE Jockey -4420 305 6 8 639 1141 82 82 0 chrUextra 7084233 7084416 -21920240 - DMCR1A LINE CR1 -1114 3356 3159 8 639 369 259 0 0 chrUextra 7084825 7084933 -21919723 + Gypsy7_I LTR Gypsy 1560 1667 -3317 8 639 1314 29 6 39 chrUextra 7084959 7085141 -21919515 - G5A_DM LINE Jockey -3 2838 2663 8 639 475 291 77 17 chrUextra 7085142 7085376 -21919280 + Gypsy7_I LTR Gypsy 1239 1486 -3498 8 639 1347 267 65 27 chrUextra 7085780 7086292 -21918364 - TOM_I LTR Gypsy -5147 965 435 8 639 2726 3 0 0 chrUextra 7086402 7086714 -21917942 + BS2 LINE Jockey 4410 4721 0 8 639 207 0 0 0 chrUextra 7086720 7086743 -21917913 + (A)n Simple_repeat Simple_repeat 1 23 0 8 639 2090 171 31 6 chrUextra 7086743 7087227 -21917429 - SAR_DM Satellite Satellite -444 1028 533 8 639 3132 184 18 20 chrUextra 7087327 7088152 -21916504 + SAR_DM Satellite Satellite 1 822 -208 8 639 4337 24 11 0 chrUextra 7088252 7088801 -21915855 + FW_DM LINE Jockey 2833 3387 -1305 8 639 2395 0 0 0 chrUextra 7088801 7089077 -21915579 + STALKER4_LTR LTR Gypsy 1 276 -126 8 639 6783 17 0 0 chrUextra 7089177 7090002 -21914654 + MDG3_I LTR Gypsy 2382 3206 -1780 8 639 560 267 16 16 chrUextra 7090398 7090588 -21914068 + Transib5 DNA Transib 1410 1599 -1402 8 639 33 56 0 0 chrUextra 7090672 7090726 -21913930 + AT_rich Low_complexity Low_complexity 1 54 0 8 639 234 98 24 0 chrUextra 7090886 7090927 -21913729 - BS2 LINE Jockey -678 4043 4002 8 639 5323 83 34 5 chrUextra 7091027 7091852 -21912804 + BATUMI_I LTR Pao 4315 5262 -2652 8 639 6709 23 1 1 chrUextra 7091952 7092777 -21911879 + R1_DM LINE R1 2028 2852 -2504 8 639 214 228 24 37 chrUextra 7092954 7093036 -21911620 + T-rich Low_complexity Low_complexity 2 82 0 8 639 180 0 0 0 chrUextra 7093441 7093461 -21911195 + (A)n Simple_repeat Simple_repeat 1 20 0 8 639 634 146 9 0 chrUextra 7093841 7093951 -21910705 + Gypsy12A_LTR LTR Gypsy 2152 2262 -18 8 639 906 223 241 30 chrUextra 7093958 7094365 -21910291 + TAHRE LINE telomeric 9807 10299 -164 8 639 287 122 81 30 chrUextra 7094417 7094517 -21910139 + TART LINE telomeric 10421 10489 -3988 8 639 1046 335 25 6 chrUextra 7094727 7095549 -21909107 - DM1731_I LTR Copia -259 3717 2845 8 639 2838 175 91 29 chrUextra 7095654 7096476 -21908180 + HETA LINE telomeric 4036 5266 -815 8 639 946 51 0 0 chrUextra 7096577 7096695 -21907961 + PROTOP DNA P 4363 4480 0 8 639 27 81 0 0 chrUextra 7097043 7097105 -21907551 + AT_rich Low_complexity Low_complexity 1 62 0 8 639 23 68 0 0 chrUextra 7097151 7097195 -21907461 + AT_rich Low_complexity Low_complexity 1 44 0 8 639 27 73 0 0 chrUextra 7097232 7097287 -21907369 + AT_rich Low_complexity Low_complexity 1 55 0 8 639 5522 41 14 8 chrUextra 7097584 7098323 -21906333 - R1_DM LINE R1 -4037 1319 577 8 639 6785 16 0 1 chrUextra 7098427 7099252 -21905404 + FW_DM LINE Jockey 933 1756 -2936 8 639 30 45 0 0 chrUextra 7099382 7099426 -21905230 + AT_rich Low_complexity Low_complexity 1 44 0 8 639 1949 183 51 29 chrUextra 7099433 7099946 -21904710 + Stalker2_I LTR Gypsy 291 814 -6588 8 639 1665 14 0 32 chrUextra 7099961 7100177 -21904479 + STALKER4_I LTR Gypsy 1064 1272 -5258 8 639 3176 188 57 39 chrUextra 7100277 7101102 -21903554 - TAHRE LINE telomeric -2595 7868 7029 8 639 6823 13 0 0 chrUextra 7102127 7102952 -21901704 - STALKER4_I LTR Gypsy -767 5763 4939 8 639 1279 117 65 0 chrUextra 7103055 7103269 -21901387 + Invader1_LTR LTR Gypsy 196 423 0 8 639 2033 126 95 82 chrUextra 7103341 7103877 -21900779 - HMSBEAGLE_I LTR Gypsy -5951 578 36 8 639 3501 4 31 0 chrUextra 7103977 7104435 -21900221 + Invader2_I LTR Gypsy 4121 4592 0 8 639 2176 23 8 0 chrUextra 7104435 7104699 -21899957 + Invader2_LTR LTR Gypsy 1 266 0 8 639 400 170 41 41 chrUextra 7104703 7104801 -21899855 + Gypsy6_I LTR Gypsy 3447 3544 -3468 8 639 6754 34 0 0 chrUextra 7104902 7105727 -21898929 - BS2 LINE Jockey -835 3886 3062 8 639 3939 23 2 0 chrUextra 7105827 7106307 -21898349 + R1_DM LINE R1 4876 5356 0 8 639 2069 68 55 6 chrUextra 7106340 7106651 -21898005 + R1_DM LINE R1 1 326 -5030 8 639 2932 132 4 10 chrUextra 7106751 7107262 -21897394 + TAHRE LINE telomeric 9946 10453 -10 8 639 2554 3 3 3 chrUextra 7107262 7107575 -21897081 + HETA LINE telomeric 4462 4774 -1307 8 639 739 219 0 0 chrUextra 7107678 7107874 -21896782 + SAR_DM Satellite Satellite 528 723 -749 8 639 2486 174 26 18 chrUextra 7107885 7108499 -21896157 + SAR_DM Satellite Satellite 191 809 -663 8 639 1119 94 27 6 chrUextra 7108600 7108867 -21895789 + PROTOP_A DNA P 573 773 -332 8 639 4247 6 0 2 chrUextra 7108911 7109423 -21895233 - DOC LINE Jockey 0 4725 4215 8 639 2317 91 12 51 chrUextra 7109523 7110342 -21894314 - DMSAT6 Satellite Satellite -71 787 1 8 639 2079 16 0 0 chrUextra 7110447 7110700 -21893956 - STALKER4_I LTR Gypsy -1303 5227 4975 8 639 2313 122 13 13 chrUextra 7110722 7111271 -21893385 + DMSAT6 Satellite Satellite 1 548 -3 8 639 2381 168 30 18 chrUextra 7111388 7111951 -21892705 + SAR_DM Satellite Satellite 326 895 -577 8 639 507 135 0 0 chrUextra 7112020 7112109 -21892547 + SAR_DM Satellite Satellite 543 631 -841 8 639 397 183 0 0 chrUextra 7112102 7112195 -21892461 - ARS406_DM Unknown Unknown -224 129 37 8 639 631 25 0 0 chrUextra 7112295 7112375 -21892281 - MICROPIA_LTR LTR Gypsy -395 81 2 8 639 5316 19 0 0 chrUextra 7112405 7113042 -21891614 - Copia2_I LTR Copia 0 4162 3526 8 639 1846 178 11 7 chrUextra 7113219 7114043 -21890613 - SAR_DM Satellite Satellite -708 826 1 8 639 5017 64 55 18 chrUextra 7114143 7114967 -21889689 + STALKER4_I LTR Gypsy 709 1562 -4968 8 639 7113 1 2 2 chrUextra 7115067 7115891 -21888765 - SSU-rRNA_Dme rRNA rRNA -147 1848 1025 8 639 351 0 0 0 chrUextra 7115991 7116030 -21888626 + (TG)n Simple_repeat Simple_repeat 2 40 0 8 639 2882 24 118 0 chrUextra 7116915 7117296 -21887360 - R1_DM LINE R1 -1671 3685 3260 8 639 1884 39 8 45 chrUextra 7117296 7117562 -21887094 + BLOOD_LTR LTR Gypsy 1 256 -143 8 639 466 35 0 0 chrUextra 7117679 7117737 -21886919 + BLOOD_I LTR Gypsy 1 58 -6555 8 639 1587 9 0 0 chrUextra 7117843 7118065 -21886591 + (TTATA)n Simple_repeat Simple_repeat 1 222 0 8 639 2239 36 103 0 chrUextra 7118065 7118366 -21886290 + DM1731_LTR LTR Copia 5 336 0 8 639 2552 0 3 0 chrUextra 7118366 7118663 -21885993 + DM1731_I LTR Copia 1 298 -3678 8 639 5179 2 0 0 chrUextra 7118763 7119356 -21885300 - DOC LINE Jockey -4123 602 10 8 639 233 0 0 161 chrUextra 7119371 7119582 -21885074 + (TTGTG)n Simple_repeat Simple_repeat 4 180 0 8 639 5032 43 30 99 chrUextra 7119687 7120511 -21884145 - Stalker2_I LTR Gypsy -2702 4700 3934 8 639 2103 0 0 0 chrUextra 7120611 7120855 -21883801 + Copia_I LTR Copia 4350 4593 0 8 639 2256 4 0 4 chrUextra 7120855 7121132 -21883524 + Copia_LTR LTR Copia 1 276 0 8 639 265 402 0 0 chrUextra 7121535 7121632 -21883024 + polypyrimidine Low_complexity Low_complexity 1 97 0 8 639 3600 22 121 4 chrUextra 7122459 7123282 -21881374 + R1_DM LINE R1 2983 3902 -1454 8 639 886 291 0 4 chrUextra 7123383 7123642 -21881014 - TOM_I LTR Gypsy -5227 885 628 8 639 652 125 18 106 chrUextra 7123773 7123943 -21880713 - TOM_I LTR Gypsy -5957 155 1 8 639 1738 46 99 8 chrUextra 7123943 7124205 -21880451 - DMTOM1_LTR LTR Gypsy 0 410 125 8 639 3554 167 16 15 chrUextra 7124307 7125131 -21879525 + SAR_DM Satellite Satellite 212 1036 -436 8 639 4975 22 84 1 chrUextra 7125231 7126055 -21878601 - R1_DM LINE R1 -1422 3934 3043 8 639 3467 186 7 8 chrUextra 7126155 7126979 -21877677 + SAR_DM Satellite Satellite 254 1076 -396 8 639 1620 0 0 0 chrUextra 7127081 7127361 -21877295 + (CACAA)n Simple_repeat Simple_repeat 1 280 0 8 639 3438 2 0 2 chrUextra 7127391 7127794 -21876862 - STALKER4_LTR LTR Gypsy 0 402 1 8 639 768 10 0 37 chrUextra 7127794 7127903 -21876753 - STALKER4_I LTR Gypsy 0 6530 6426 8 639 862 19 0 0 chrUextra 7128927 7129033 -21875623 - FW_DM LINE Jockey -3189 1503 1398 8 639 5897 18 1 3 chrUextra 7129029 7129751 -21874905 - FW_DM LINE Jockey -3936 756 36 8 639 3063 190 23 40 chrUextra 7129853 7129877 -21874779 + SAR_DM Satellite Satellite 1 39 -984 8 639 840 263 26 17 chrUextra 7129877 7130222 -21874434 - XDMR_DM Unknown Unknown -7 353 6 8 639 3063 190 23 40 chrUextra 7130222 7130675 -21873981 + SAR_DM Satellite Satellite 40 807 -216 8 639 3911 31 0 0 chrUextra 7130775 7131260 -21873396 + NINJA_I LTR Pao 1156 1640 -4371 8 639 1727 58 0 0 chrUextra 7132653 7132879 -21871777 + PROTOP_B DNA P 73 297 -856 8 639 2316 85 81 126 chrUextra 7132866 7133447 -21871209 + PROTOP_B DNA P 520 1074 -79 8 639 5663 85 65 1 chrUextra 7133547 7134371 -21870285 - Gypsy12_I LTR Gypsy -11 5535 4659 8 639 4044 0 0 2 chrUextra 7134471 7134940 -21869716 + ACCORD_LTR LTR Gypsy 91 558 0 8 639 5178 21 119 1 chrUextra 7135395 7136219 -21868437 - IDEFIX_I LTR Gypsy -4141 1487 567 8 639 3328 185 16 19 chrUextra 7136320 7137142 -21867514 + SAR_DM Satellite Satellite 346 1164 -308 8 639 234 0 0 0 chrUextra 7137243 7137269 -21867387 + (TATAA)n Simple_repeat Simple_repeat 4 29 0 8 639 1416 39 0 0 chrUextra 7137289 7137468 -21867188 + (CAATA)n Simple_repeat Simple_repeat 1 179 0 8 639 3372 179 11 20 chrUextra 7138166 7138983 -21865673 - SAR_DM Satellite Satellite -417 1055 246 8 639 251 130 0 0 chrUextra 7138943 7138989 -21865667 + ARS406_DM Unknown Unknown 1 46 -307 8 639 1307 55 20 29 chrUextra 7139089 7139293 -21865363 - CIRCE LINE Composite -4832 1524 1323 8 639 392 341 32 18 chrUextra 7139174 7139452 -21865204 - Gypsy12_I LTR Gypsy -2177 3369 3088 8 639 2165 63 6 78 chrUextra 7139393 7139738 -21864918 - CIRCE LINE Composite -5064 1292 973 8 639 232 62 0 0 chrUextra 7139880 7139912 -21864744 - CIRCE LINE Composite -5386 970 939 8 639 5099 3 0 3 chrUextra 7140012 7140607 -21864049 + LSU-rRNA_Dme rRNA rRNA 1864 2456 -1444 8 639 1930 0 0 0 chrUextra 7140610 7140835 -21863821 + R2_DM LINE R2 603 827 -2780 8 639 3569 131 15 24 chrUextra 7140935 7141695 -21862961 + MDG1_I LTR Gypsy 5693 6799 -98 8 639 477 34 0 0 chrUextra 7141699 7141758 -21862898 + (TAA)n Simple_repeat Simple_repeat 3 61 0 8 639 2192 126 33 26 chrUextra 7141862 7142675 -21861981 + DMSAT6 Satellite Satellite 1 819 -49 8 639 5724 1 1 0 chrUextra 7142781 7143440 -21861216 + LSU-rRNA_Dme rRNA rRNA 1970 2629 -1271 8 639 1407 6 0 0 chrUextra 7143440 7143604 -21861052 + R2_DM LINE R2 2430 2593 -1014 8 639 1247 248 6 15 chrUextra 7143704 7144032 -21860624 + ROVER-I_DM LTR Gypsy 939 1263 -5321 8 639 1175 259 43 49 chrUextra 7144020 7144527 -21860129 + ROVER-I_DM LTR Gypsy 1515 2018 -4566 8 639 2313 132 13 20 chrUextra 7144627 7145447 -21859209 + DMSAT6 Satellite Satellite 1 814 -74 8 639 2147 178 32 81 chrUextra 7145550 7146373 -21858283 + TAHRE LINE telomeric 6 928 -5153 8 639 862 326 12 12 chrUextra 7146882 7147292 -21857364 - MICROPIA_I LTR Gypsy -626 3850 3347 8 639 477 33 0 0 chrUextra 7147396 7147456 -21857200 + ARS406_DM Unknown Unknown 130 189 -164 8 639 3085 201 11 19 chrUextra 7147406 7148205 -21856451 - SAR_DM Satellite Satellite -255 1217 425 8 639 231 62 0 0 chrUextra 7148319 7148351 -21856305 - R1_DM LINE R1 -5302 54 23 8 639 6325 25 1 3 chrUextra 7148372 7149142 -21855514 - R1_DM LINE R1 0 5356 4588 8 639 6702 22 13 1 chrUextra 7149242 7150065 -21854591 + Gypsy2_I LTR Gypsy 2169 3001 -3134 8 639 851 28 0 0 chrUextra 7150166 7150274 -21854382 + NTS_DM Other Other 26 133 -107 8 639 1252 18 0 6 chrUextra 7150274 7150439 -21854217 + NTS_DM Other Other 38 201 -39 8 639 4508 13 2 2 chrUextra 7150449 7150988 -21853668 + DM412B_LTR LTR Gypsy 1 539 -32 8 639 2929 203 17 21 chrUextra 7151088 7151904 -21852752 + SAR_DM Satellite Satellite 418 1230 -242 8 639 3086 184 26 11 chrUextra 7152011 7152803 -21851853 - SAR_DM Satellite Satellite -489 983 180 8 639 832 76 38 0 chrUextra 7152702 7152834 -21851822 + ARS406_DM Unknown Unknown 1 137 -216 8 639 5215 2 2 2 chrUextra 7152934 7153544 -21851112 - Copia_I LTR Copia -3948 645 36 8 639 857 29 0 0 chrUextra 7153654 7153757 -21850899 - PROTOP DNA P -32 4448 4346 8 639 6139 45 6 0 chrUextra 7153857 7154680 -21849976 - IDEFIX_I LTR Gypsy -4524 1104 277 8 639 2655 183 74 15 chrUextra 7154807 7155602 -21849054 + TART LINE telomeric 8950 9650 -4827 8 639 2607 56 56 0 chrUextra 7155703 7156063 -21848593 + G5_DM LINE Jockey 3988 4367 -489 8 639 1830 40 12 8 chrUextra 7156060 7156314 -21848342 + G5_DM LINE Jockey 4602 4856 0 8 639 1292 113 5 5 chrUextra 7156313 7156526 -21848130 - BS2 LINE Jockey -4464 257 45 8 639 3332 29 4 43 chrUextra 7156911 7157376 -21847280 + CIRCE LINE Composite 4981 5427 -929 8 639 2229 28 62 3 chrUextra 7158081 7158372 -21846284 + PROTOP DNA P 1 308 -4172 8 639 580 29 1 0 chrUextra 7158475 7158551 -21846105 + R1_DM LINE R1 3598 3666 -1690 8 639 6071 22 14 0 chrUextra 7158561 7159295 -21845361 + R1_DM LINE R1 4026 4769 -587 8 639 1904 0 0 0 chrUextra 7159395 7159618 -21845038 + Copia_I LTR Copia 4371 4593 0 8 639 2273 7 0 0 chrUextra 7159618 7159894 -21844762 + Copia_LTR LTR Copia 1 276 0 8 639 2153 31 45 0 chrUextra 7159894 7160177 -21844479 + PROTOP DNA P 276 571 -3909 8 639 316 0 0 0 chrUextra 7160318 7160354 -21844302 - Copia_I LTR Copia -4557 36 1 8 639 232 0 0 0 chrUextra 7160354 7160388 -21844268 - Copia_LTR LTR Copia 0 276 243 8 639 2233 14 0 0 chrUextra 7160388 7160664 -21843992 - Copia_LTR LTR Copia 0 276 1 8 639 3859 7 0 0 chrUextra 7160680 7161141 -21843515 + QUASIMODO_LTR LTR Gypsy 1 461 -197 8 639 2167 76 1 50 chrUextra 7161241 7162064 -21842592 + DMSAT6 Satellite Satellite 1 782 -64 8 639 6734 19 5 1 chrUextra 7162164 7162987 -21841669 - R1_DM LINE R1 -876 4480 3655 8 639 4625 41 2 2 chrUextra 7163087 7163678 -21840978 - R1_DM LINE R1 -3992 1364 774 8 639 1571 75 13 0 chrUextra 7163681 7163908 -21840748 - R1_DM LINE R1 -5126 230 1 8 639 3224 194 14 9 chrUextra 7164011 7164817 -21839839 + SAR_DM Satellite Satellite 267 1076 -396 8 639 4310 0 0 0 chrUextra 7164933 7165433 -21839223 + FW_DM LINE Jockey 4193 4692 0 8 639 663 184 47 18 chrUextra 7165424 7165595 -21839061 + TART LINE telomeric 9391 9566 -4911 8 639 752 150 7 20 chrUextra 7165594 7165744 -21838912 + TART LINE telomeric 7123 7270 -7207 8 639 6652 27 1 5 chrUextra 7165856 7166679 -21837977 + R1_DM LINE R1 4194 5013 -343 8 639 4945 33 8 3 chrUextra 7166779 7167395 -21837261 - DMCR1A LINE CR1 -3188 1282 664 8 639 872 39 7 59 chrUextra 7167389 7167524 -21837132 - DMCR1A LINE CR1 -4104 366 239 8 639 572 27 0 0 chrUextra 7167528 7167602 -21837054 - DOC3_DM LINE Jockey -3990 750 677 8 639 3017 184 69 48 chrUextra 7167718 7168517 -21836139 + Gypsy12_LTR LTR Gypsy 1503 2318 -18 8 639 6979 6 5 0 chrUextra 7168625 7169448 -21835208 + FW_DM LINE Jockey 533 1359 -3333 8 639 3113 206 11 20 chrUextra 7169552 7170368 -21834288 - SAR_DM Satellite Satellite -535 808 1 8 639 2123 0 0 0 chrUextra 7170473 7170719 -21833937 + DM297_LTR LTR Gypsy 169 414 0 8 639 1879 79 4 0 chrUextra 7170998 7171263 -21833393 + Baggins1 LINE LOA 4762 5027 -426 8 639 3086 204 8 14 chrUextra 7171394 7172217 -21832439 - SAR_DM Satellite Satellite -542 818 1 8 639 7100 4 1 1 chrUextra 7172317 7173140 -21831516 - TART LINE telomeric -10822 3655 2833 8 639 6300 9 1 32 chrUextra 7173247 7174063 -21830593 - STALKER4_I LTR Gypsy -2952 3578 2788 8 639 2801 24 2 64 chrUextra 7174163 7174570 -21830086 - DM176_I LTR Gypsy -5586 834 453 8 639 1204 20 7 0 chrUextra 7174558 7174706 -21829950 - DM176_I LTR Gypsy -6271 149 1 8 639 1342 78 103 46 chrUextra 7174706 7174986 -21829670 - DM176_LTR LTR Gypsy -27 480 199 8 639 4998 104 40 15 chrUextra 7175102 7175909 -21828747 + Gypsy12_I LTR Gypsy 2351 3177 -2369 8 639 6712 4 17 11 chrUextra 7176011 7176832 -21827824 + MAX_I LTR Pao 840 1665 -6249 8 639 3116 206 20 5 chrUextra 7176932 7177747 -21826909 + SAR_DM Satellite Satellite 250 1076 -396 8 639 1824 5 0 0 chrUextra 7178466 7178676 -21825980 - PROTOP DNA P 0 4480 4271 8 639 21 89 0 0 chrUextra 7179331 7179387 -21825269 + AT_rich Low_complexity Low_complexity 1 56 0 8 639 7128 1 0 1 chrUextra 7179701 7180524 -21824132 - R2_DM LINE R2 -2641 966 145 8 639 2607 210 41 43 chrUextra 7180626 7181447 -21823209 - TAHRE LINE telomeric -2546 7917 7098 8 639 2291 63 0 6 chrUextra 7181547 7181867 -21822789 + R1_DM LINE R1 294 611 -4745 8 639 1660 56 0 0 chrUextra 7181869 7182082 -21822574 + R1_DM LINE R1 1247 1459 -3897 8 639 2283 22 0 0 chrUextra 7182093 7182370 -21822286 + R1_DM LINE R1 1556 1832 -3524 8 639 629 133 0 0 chrUextra 7182470 7182583 -21822073 - ARS406_DM Unknown Unknown -240 113 1 8 639 3304 184 10 12 chrUextra 7182490 7183292 -21821364 + SAR_DM Satellite Satellite 195 994 -478 8 639 976 73 7 18 chrUextra 7183400 7184215 -21820441 + RSP Satellite Satellite 1 806 0 8 639 6618 27 21 0 chrUextra 7184315 7185134 -21819522 + R1_DM LINE R1 3950 4785 -571 8 639 3445 111 70 89 chrUextra 7185241 7186059 -21818597 + PROTOP_B DNA P 304 1105 -48 8 639 3507 174 8 18 chrUextra 7186159 7186961 -21817695 - SAR_DM Satellite Satellite -353 1119 326 8 639 908 80 5 18 chrUextra 7187096 7187903 -21816753 + RSP Satellite Satellite 1 796 0 8 639 2011 141 1 2 chrUextra 7188003 7188520 -21816136 - G_DM LINE Jockey -906 1136 622 8 639 1039 8 0 23 chrUextra 7188510 7188639 -21816017 - BATUMI_I LTR Pao -677 7286 7161 8 639 1434 27 0 5 chrUextra 7188638 7188825 -21815831 - BATUMI_I LTR Pao -424 7539 7354 8 639 4233 19 0 0 chrUextra 7188925 7189442 -21815214 + FW_DM LINE Jockey 2562 3078 -1614 8 639 2635 0 0 0 chrUextra 7189442 7189746 -21814910 + DOC LINE Jockey 11 314 -4411 8 639 1120 7 14 0 chrUextra 7189847 7189986 -21814670 - MICROPIA_LTR LTR Gypsy -335 141 1 8 639 550 0 0 0 chrUextra 7189986 7190050 -21814606 + ACCORD2_I LTR Gypsy 1081 1144 -6068 8 639 228 86 0 0 chrUextra 7190050 7190085 -21814571 + (TAA)n Simple_repeat Simple_repeat 2 36 0 8 639 1551 122 252 21 chrUextra 7190099 7190519 -21814137 + ACCORD2_I LTR Gypsy 1258 1774 -5438 8 639 248 47 432 36 chrUextra 7190533 7190644 -21814012 + ACCORD2_I LTR Gypsy 1556 1710 -5502 8 639 3198 203 11 19 chrUextra 7190781 7191583 -21813073 - SAR_DM Satellite Satellite -535 795 1 8 639 3249 176 37 18 chrUextra 7191691 7192484 -21812172 - SAR_DM Satellite Satellite -480 992 185 8 639 641 182 0 0 chrUextra 7192381 7192513 -21812143 + ARS406_DM Unknown Unknown 1 132 -221 8 639 3251 193 17 16 chrUextra 7192616 7193433 -21811223 + SAR_DM Satellite Satellite 347 1164 -308 8 639 1154 298 85 24 chrUextra 7193543 7194353 -21810303 + HMSBEAGLE_I LTR Gypsy 3434 4270 -2259 8 639 5978 61 23 4 chrUextra 7194457 7195279 -21809377 + Gypsy7_I LTR Gypsy 2754 3591 -1393 8 639 2048 186 10 6 chrUextra 7195384 7196201 -21808455 - SAR_DM Satellite Satellite -535 819 1 8 639 1932 171 7 9 chrUextra 7196301 7197123 -21807533 + SAR_DM Satellite Satellite 1 820 -677 8 639 3390 175 16 13 chrUextra 7198145 7198939 -21805717 - SAR_DM Satellite Satellite -404 1068 272 8 639 3778 23 4 4 chrUextra 7199067 7199543 -21805113 + R1_DM LINE R1 4794 5269 -87 8 639 2570 69 12 0 chrUextra 7199543 7199889 -21804767 + R1_DM LINE R1 1257 1606 -3750 8 639 6818 19 2 1 chrUextra 7199989 7200811 -21803845 - FW_DM LINE Jockey -289 4403 3581 8 639 236 192 0 0 chrUextra 7200938 7200990 -21803666 + DNAREP1_DM LINE Penelope 58 109 -485 8 639 855 143 357 28 chrUextra 7201027 7201329 -21803327 + DNAREP1_DM LINE Penelope 193 592 -2 8 639 4572 54 51 128 chrUextra 7201833 7202655 -21802001 + CIRCE LINE Composite 5177 5935 -421 8 639 6616 26 1 2 chrUextra 7202755 7203577 -21801079 - R1_DM LINE R1 -1200 4156 3336 8 639 248 32 0 0 chrUextra 7203677 7203708 -21800948 + ARS406_DM Unknown Unknown 159 189 -164 8 639 3318 182 15 19 chrUextra 7203684 7204497 -21800159 - SAR_DM Satellite Satellite -281 1191 382 8 639 3960 130 102 0 chrUextra 7204599 7205421 -21799235 - HETA LINE telomeric -2849 3232 2327 8 639 3440 89 2 0 chrUextra 7205521 7206036 -21798620 + S_DM DNA Tc1 1221 1736 0 8 639 1172 106 0 0 chrUextra 7206088 7206267 -21798389 + MAX_I LTR Pao 547 725 -7189 8 639 351 62 125 0 chrUextra 7206279 7206343 -21798313 + MAX_I LTR Pao 824 895 -7019 8 639 3357 8 0 0 chrUextra 7206443 7206831 -21797825 + ROO_LTR LTR Pao 41 428 0 8 639 6220 46 5 2 chrUextra 7207365 7208187 -21796469 - R1_DM LINE R1 -4007 1349 526 8 639 2663 31 0 28 chrUextra 7208287 7208646 -21796010 - ROVER-LTR_DM LTR Gypsy -18 349 1 8 639 352 288 2 2 chrUextra 7208694 7208858 -21795798 - ACCORD2_I LTR Gypsy -1286 5926 5786 8 640 6758 15 19 0 chrUextra 7209209 7210031 -21794625 + DOC2_DM LINE Jockey 1882 2719 -2074 8 640 664 104 0 0 chrUextra 7210131 7210237 -21794419 - ARS406_DM Unknown Unknown -247 106 1 8 640 2972 176 20 14 chrUextra 7210144 7210849 -21793807 + SAR_DM Satellite Satellite 195 903 -569 8 640 657 53 53 0 chrUextra 7210764 7210859 -21793797 - ARS406_DM Unknown Unknown -164 189 90 8 640 613 93 0 0 chrUextra 7210856 7210953 -21793703 - ARS406_DM Unknown Unknown -195 158 62 8 640 739 168 24 24 chrUextra 7211053 7211218 -21793438 + GTWIN_LTR LTR Gypsy 238 402 -93 8 640 3275 59 62 18 chrUextra 7211375 7211874 -21792782 + QUASIMODO_I LTR Gypsy 4249 4769 -1291 8 640 869 157 116 40 chrUextra 7211975 7212200 -21792456 + Gypsy12_LTR LTR Gypsy 1245 1486 -850 8 640 680 145 8 0 chrUextra 7212201 7212318 -21792338 + Gypsy12_LTR LTR Gypsy 2145 2262 -18 8 640 595 244 105 78 chrUextra 7212308 7212566 -21792090 + TAHRE LINE telomeric 9807 10279 -4198 8 640 390 205 0 38 chrUextra 7212549 7212681 -21791975 + TAHRE LINE telomeric 10173 10299 -164 8 640 3278 175 21 25 chrUextra 7212903 7213717 -21790939 + SAR_DM Satellite Satellite 349 1159 -313 8 640 2429 0 0 0 chrUextra 7213819 7214097 -21790559 + ACCORD_LTR LTR Gypsy 281 558 0 8 640 4699 4 0 0 chrUextra 7214097 7214641 -21790015 - BS2 LINE Jockey -1793 2928 2385 8 640 2984 40 5 0 chrUextra 7214832 7215209 -21789447 - STALKER4_LTR LTR Gypsy -23 379 1 8 640 2310 34 37 3 chrUextra 7215209 7215563 -21789093 - STALKER4_I LTR Gypsy 0 6530 6165 8 640 1659 197 8 8 chrUextra 7215663 7216206 -21788450 + BATUMI_I LTR Pao 4118 4736 -3178 8 640 2420 4 0 0 chrUextra 7216205 7216485 -21788171 + BATUMI_I LTR Pao 4900 5179 -2784 8 640 6683 1 1 0 chrUextra 7216585 7217407 -21787249 - TRANSPAC_I LTR Gypsy -353 4237 3415 8 640 960 14 34 20 chrUextra 7217507 7217656 -21787000 + NTS_DM Other Other 90 240 0 8 640 1716 25 17 17 chrUextra 7217656 7217896 -21786760 + NTS_DM Other Other 1 240 0 8 640 1170 43 0 24 chrUextra 7217896 7218062 -21786594 + NTS_DM Other Other 1 162 -78 8 640 396 155 35 12 chrUextra 7218171 7218256 -21786400 + NTS_DM Other Other 4 90 -150 8 640 6897 12 0 0 chrUextra 7218429 7219251 -21785405 + PROTOP DNA P 1910 2731 -1749 8 640 2324 108 41 9 chrUextra 7220273 7221095 -21783561 - DMSAT6 Satellite Satellite -113 848 1 8 640 3198 48 1 14 chrUextra 7221225 7221664 -21782992 - STALKER4_LTR LTR Gypsy -3 399 1 8 640 2713 31 71 0 chrUextra 7221664 7222017 -21782639 + R1_DM LINE R1 4390 4767 -589 8 640 2735 129 75 31 chrUextra 7222128 7222673 -21781983 - Gypsy_I LTR Gypsy -5714 793 225 8 640 2319 4 0 0 chrUextra 7222684 7222938 -21781718 + LINEJ1_DM LINE Jockey 4111 4364 -656 8 640 6799 28 0 16 chrUextra 7223038 7223859 -21780797 - CIRCE LINE Composite -3171 3185 2378 8 640 2588 86 37 38 chrUextra 7223959 7224780 -21779876 - DMSAT6 Satellite Satellite -104 820 1 8 640 697 115 0 0 chrUextra 7224880 7224993 -21779663 - ARS406_DM Unknown Unknown -239 114 2 8 640 3563 186 20 10 chrUextra 7224901 7225700 -21778956 + SAR_DM Satellite Satellite 195 1001 -471 8 640 922 237 4 4 chrUextra 7225801 7226026 -21778630 - ROVER-I_DM LTR Gypsy -4304 2280 2056 8 640 1826 289 5 5 chrUextra 7226030 7226618 -21778038 - ROVER-I_DM LTR Gypsy -4949 1635 1048 8 640 1586 0 0 0 chrUextra 7226722 7226895 -21777761 + DOC LINE Jockey 4139 4311 -414 8 640 5526 14 0 1 chrUextra 7226895 7227543 -21777113 - M4DM DNA Transib 0 1435 789 8 640 3685 10 0 0 chrUextra 7227643 7228059 -21776597 + PROTOP_A DNA P 690 1105 0 8 640 1198 84 12 0 chrUextra 7228059 7228213 -21776443 + DOC3_DM LINE Jockey 1740 1895 -2845 8 640 2146 24 16 0 chrUextra 7228212 7228464 -21776192 + DOC3_DM LINE Jockey 2199 2454 -2286 8 640 1019 115 19 0 chrUextra 7228648 7228805 -21775851 - DNAREP1_DM LINE Penelope -429 165 6 8 640 231 139 0 0 chrUextra 7228812 7228855 -21775801 - DM176_I LTR Gypsy -1654 4766 4724 8 640 254 186 439 8 chrUextra 7228883 7229013 -21775643 + PROTOP DNA P 1 186 -4294 8 640 6432 49 14 6 chrUextra 7229501 7230305 -21774351 + DOC3_DM LINE Jockey 3070 3879 -861 8 640 2963 179 25 4 chrUextra 7230406 7231227 -21773429 - SAR_DM Satellite Satellite -603 838 1 8 640 1858 274 6 6 chrUextra 7231341 7231968 -21772688 - Copia_I LTR Copia -2314 2279 1653 8 640 1843 117 56 2 chrUextra 7232637 7233064 -21771592 + DNAREP1_DM LINE Penelope 3 332 -262 8 640 1810 308 45 5 chrUextra 7233195 7233971 -21770685 + MICROPIA_I LTR Gypsy 2242 3048 -1428 8 640 7469 1 1 1 chrUextra 7234090 7234911 -21769745 + SSU-rRNA_Dme rRNA rRNA 378 1198 -797 8 640 4168 2 0 6 chrUextra 7235014 7235497 -21769159 - QUASIMODO_LTR LTR Gypsy -178 480 1 8 640 408 164 43 73 chrUextra 7235497 7235649 -21769007 + BATUMI_I LTR Pao 623 769 -7194 8 640 847 93 7 21 chrUextra 7235690 7235832 -21768824 + BATUMI_I LTR Pao 749 888 -7075 8 640 3582 171 64 10 chrUextra 7235938 7236747 -21767909 - SAR_DM Satellite Satellite -425 1047 195 8 640 2573 87 19 33 chrUextra 7236853 7237674 -21766982 + DMSAT6 Satellite Satellite 1 809 -82 8 640 3320 201 8 11 chrUextra 7237774 7238566 -21766090 - SAR_DM Satellite Satellite -489 983 195 8 640 742 115 0 8 chrUextra 7238472 7238595 -21766061 + ARS406_DM Unknown Unknown 1 122 -231 8 640 1590 297 10 10 chrUextra 7238695 7239199 -21765457 + Gypsy6_I LTR Gypsy 6508 7011 -1 8 640 1835 78 29 67 chrUextra 7239202 7239516 -21765140 + Gypsy6A_LTR LTR Gypsy 1 302 -118 8 640 246 191 0 0 chrUextra 7239628 7239675 -21764981 - DMCR1A LINE CR1 -3680 790 744 8 640 592 127 36 0 chrUextra 7239742 7239852 -21764804 + DMCR1A LINE CR1 7 120 -4350 8 640 574 137 11 0 chrUextra 7239847 7239942 -21764714 + DMCR1A LINE CR1 365 460 -4010 8 640 3335 31 4 55 chrUextra 7239961 7240437 -21764219 + DOC5_DM LINE Jockey 3979 4430 -252 8 640 2622 82 37 7 chrUextra 7240541 7241356 -21763300 - DMSAT6 Satellite Satellite -251 839 1 8 640 261 75 434 0 chrUextra 7241828 7241881 -21762775 + PROTOP_B DNA P 1 76 -1077 8 640 1710 72 0 0 chrUextra 7241871 7242093 -21762563 + Gypsy12_I LTR Gypsy 2449 2670 -2876 8 640 1304 111 0 26 chrUextra 7242084 7242278 -21762378 + Gypsy12_I LTR Gypsy 2811 2999 -2547 8 640 3557 190 10 11 chrUextra 7242381 7243200 -21761456 + SAR_DM Satellite Satellite 195 1012 -460 8 640 3127 183 61 15 chrUextra 7243300 7244087 -21760569 - SAR_DM Satellite Satellite -459 1013 191 8 640 476 170 0 10 chrUextra 7244017 7244118 -21760538 + ARS406_DM Unknown Unknown 29 128 -225 8 640 6647 27 8 4 chrUextra 7244221 7245042 -21759614 + ROO_I LTR Pao 763 1587 -6669 8 640 2689 176 17 19 chrUextra 7245144 7245959 -21758697 - SAR_DM Satellite Satellite -354 814 1 8 640 2428 7 0 0 chrUextra 7246984 7247274 -21757382 + DOC LINE Jockey 4436 4725 0 8 640 22 0 0 0 chrUextra 7247345 7247367 -21757289 + AT_rich Low_complexity Low_complexity 1 22 0 8 640 210 225 21 53 chrUextra 7247519 7247613 -21757043 + (TTATA)n Simple_repeat Simple_repeat 2 92 0 8 640 192 40 0 0 chrUextra 7248329 7248354 -21756302 + (TTA)n Simple_repeat Simple_repeat 1 25 0 8 640 30 27 0 0 chrUextra 7248471 7248508 -21756148 + AT_rich Low_complexity Low_complexity 1 37 0 8 640 2582 153 17 11 chrUextra 7248826 7249647 -21755009 - SAR_DM Satellite Satellite -554 826 1 8 640 1369 0 0 0 chrUextra 7249747 7249896 -21754760 + BATUMI_I LTR Pao 5167 5315 -2648 8 640 5765 21 1 7 chrUextra 7249894 7250568 -21754088 + BATUMI_I LTR Pao 5672 6341 -1622 8 640 1396 321 58 23 chrUextra 7250673 7251455 -21753201 + MICROPIA_I LTR Gypsy 2014 2822 -1654 8 640 2351 171 45 7 chrUextra 7251589 7252410 -21752246 + SAR_DM Satellite Satellite 1 852 -684 8 640 2616 139 16 156 chrUextra 7252510 7253330 -21751326 - BATUMI_I LTR Pao -6699 1264 560 8 640 4290 0 0 6 chrUextra 7253431 7253949 -21750707 + DOC6_DM LINE Jockey 3708 4222 0 8 640 21 0 0 0 chrUextra 7254230 7254251 -21750405 + AT_rich Low_complexity Low_complexity 1 21 0 8 640 6836 22 17 2 chrUextra 7254352 7255173 -21749483 + DOC2_DM LINE Jockey 1274 2106 -2687 8 640 949 307 47 45 chrUextra 7255297 7256058 -21748598 + BLOOD_I LTR Gypsy 1576 2338 -4275 8 640 21 89 0 0 chrUextra 7256350 7256406 -21748250 + AT_rich Low_complexity Low_complexity 1 56 0 8 640 28 71 0 0 chrUextra 7256632 7256688 -21747968 + AT_rich Low_complexity Low_complexity 1 56 0 8 640 29 47 0 0 chrUextra 7256726 7256769 -21747887 + AT_rich Low_complexity Low_complexity 1 43 0 8 640 28 71 0 0 chrUextra 7256813 7256869 -21747787 + AT_rich Low_complexity Low_complexity 1 56 0 8 640 2114 40 22 11 chrUextra 7257115 7257390 -21747266 - DOC2_DM LINE Jockey -4133 660 383 8 640 1747 288 27 11 chrUextra 7257372 7257931 -21746725 - TOM_I LTR Gypsy -890 5222 4655 8 640 6971 2 52 0 chrUextra 7258036 7258857 -21745799 + DM176_I LTR Gypsy 3015 3878 -2542 8 640 1479 40 0 2 chrUextra 7258957 7259778 -21744878 + (ATAAG)n Simple_repeat Simple_repeat 1 818 0 8 640 5844 71 0 7 chrUextra 7259886 7260698 -21743958 - BATUMI_I LTR Pao -1146 6768 5721 8 640 1875 10 0 0 chrUextra 7260798 7261006 -21743650 + LSU-rRNA_Dme rRNA rRNA 2395 2602 -1298 8 640 5413 2 0 0 chrUextra 7261013 7261618 -21743038 + R1_DM LINE R1 2534 3138 -2218 8 640 775 118 0 0 chrUextra 7261718 7261845 -21742811 - ARS406_DM Unknown Unknown -226 127 1 8 640 3438 180 9 15 chrUextra 7261749 7262537 -21742119 + SAR_DM Satellite Satellite 192 974 -498 8 640 1347 41 0 56 chrUextra 7262638 7262818 -21741838 - PROTOP DNA P -4237 243 74 8 640 5984 72 30 1 chrUextra 7263558 7264378 -21740278 - QUASIMODO_I LTR Gypsy -4754 1306 463 8 640 1494 154 14 21 chrUextra 7264745 7265030 -21739626 - PROTOP_B DNA P -4 1149 867 8 640 1219 33 7 0 chrUextra 7265148 7265298 -21739358 - Gypsy7_I LTR Gypsy -1077 3907 3757 8 640 3707 24 81 0 chrUextra 7265400 7266218 -21738438 - R1_DM LINE R1 -474 4882 3999 8 640 6785 38 8 4 chrUextra 7266318 7267138 -21737518 - Gypsy12_I LTR Gypsy -2772 2774 1951 8 640 7154 12 10 1 chrUextra 7267238 7268058 -21736598 - DOC2_DM LINE Jockey -2013 2780 1954 8 640 2322 11 19 0 chrUextra 7268158 7268421 -21736235 - ACCORD2_I LTR Gypsy -6425 787 520 8 640 3353 13 0 36 chrUextra 7268420 7268833 -21735823 - ACCORD2_I LTR Gypsy -6814 398 1 8 640 1180 21 0 28 chrUextra 7268833 7268978 -21735678 - ACCORD2_LTR LTR Gypsy 0 215 75 8 640 702 186 14 14 chrUextra 7269132 7269279 -21735377 + HETRP_DM Satellite Satellite 1529 1675 -197 8 640 715 179 14 14 chrUextra 7269416 7269563 -21735093 + HETRP_DM Satellite Satellite 1529 1675 -197 8 640 689 206 7 7 chrUextra 7269721 7269868 -21734788 + HETRP_DM Satellite Satellite 1529 1675 -197 8 640 921 28 0 0 chrUextra 7269998 7270104 -21734552 + DOC3_DM LINE Jockey 2592 2697 -2043 8 640 1587 35 5 0 chrUextra 7270102 7270301 -21734355 + DOC3_DM LINE Jockey 4540 4739 -1 8 640 1943 149 77 83 chrUextra 7270262 7270818 -21733838 - Gypsy12A_LTR LTR Gypsy -532 1748 1196 8 640 1285 188 158 21 chrUextra 7270999 7271380 -21733276 - Gypsy12_LTR LTR Gypsy -746 1590 1158 8 640 437 257 27 49 chrUextra 7271392 7271576 -21733080 - Gypsy12_LTR LTR Gypsy -1258 1078 899 8 640 622 289 28 86 chrUextra 7271843 7272445 -21732211 - GTWIN_I LTR Gypsy -2912 3508 3027 8 640 783 37 0 0 chrUextra 7272373 7272480 -21732176 - TLD2 Unknown Unknown 0 218 112 8 640 2406 100 10 48 chrUextra 7272758 7273578 -21731078 - DMSAT6 Satellite Satellite -65 788 1 8 640 913 154 0 17 chrUextra 7274106 7274284 -21730372 + CT-rich Low_complexity Low_complexity 2 176 0 8 640 527 87 0 131 chrUextra 7274295 7274494 -21730162 + CT-rich Low_complexity Low_complexity 2 174 0 8 640 1218 309 47 37 chrUextra 7274736 7275352 -21729304 - DIVER2_I LTR Pao -508 3639 3018 8 640 3561 195 6 8 chrUextra 7275538 7276335 -21728321 - SAR_DM Satellite Satellite -395 1077 282 8 640 599 323 16 13 chrUextra 7276794 7277102 -21727554 - GTWIN_I LTR Gypsy -2298 3562 3256 8 640 1620 6 0 2 chrUextra 7277358 7278178 -21726478 + (TA)n Simple_repeat Simple_repeat 1 817 0 8 640 2396 94 18 44 chrUextra 7279203 7280018 -21724638 - DMSAT6 Satellite Satellite 0 793 1 8 640 3452 56 55 0 chrUextra 7280119 7280694 -21723962 + PROTOP_A DNA P 570 1105 0 8 640 3108 187 14 18 chrUextra 7281038 7281857 -21722799 - SAR_DM Satellite Satellite -549 815 1 8 640 588 324 19 19 chrUextra 7281959 7282439 -21722217 - Gypsy6_I LTR Gypsy -3807 3205 2255 8 640 2996 162 16 10 chrUextra 7282878 7282934 -21721722 + SAR_DM Satellite Satellite 1 65 -1299 8 640 850 60 0 0 chrUextra 7282934 7283051 -21721605 - ARS406_DM Unknown Unknown -164 189 73 8 640 2996 162 16 10 chrUextra 7283051 7283698 -21720958 + SAR_DM Satellite Satellite 66 825 -539 8 640 5921 48 51 5 chrUextra 7283798 7284617 -21720039 - IDEFIX_I LTR Gypsy -3723 1905 1049 8 640 2719 47 35 71 chrUextra 7284780 7285214 -21719442 - MAX_I LTR Pao -7496 418 1 8 640 1723 115 29 0 chrUextra 7285234 7285513 -21719143 - MAX_LTR LTR Pao -34 287 1 8 640 2490 109 6 23 chrUextra 7285640 7286455 -21718201 - DMSAT6 Satellite Satellite -17 800 1 8 640 1687 216 77 54 chrUextra 7286669 7287354 -21717302 + Gypsy12_LTR LTR Gypsy 833 1533 -803 8 640 22 0 0 0 chrUextra 7287816 7287838 -21716818 + AT_rich Low_complexity Low_complexity 1 22 0 8 640 5105 23 2 0 chrUextra 7288398 7289042 -21715614 - STALKER4_I LTR Gypsy -3138 3392 2748 8 640 1344 19 0 0 chrUextra 7289056 7289218 -21715438 + FW_DM LINE Jockey 1 162 -4530 8 640 648 132 0 0 chrUextra 7289324 7289430 -21715226 + ARS406_DM Unknown Unknown 88 193 -160 8 640 1751 124 87 129 chrUextra 7289434 7289999 -21714657 + FB4_DM DNA Tc1 173 713 -3376 8 640 430 82 0 0 chrUextra 7290000 7290061 -21714595 - FB4_DM DNA Tc1 -4027 62 2 8 640 258 98 0 0 chrUextra 7290097 7290138 -21714518 - SAR_DM Satellite Satellite -1018 454 414 8 640 6398 2 110 0 chrUextra 7290238 7291058 -21713598 + NOMAD_I LTR Gypsy 720 1629 -4943 8 640 302 200 0 13 chrUextra 7291158 7291234 -21713422 - ARS406_DM Unknown Unknown -278 75 1 8 640 3241 187 28 6 chrUextra 7291171 7291968 -21712688 + SAR_DM Satellite Satellite 224 1037 -435 8 640 6713 4 11 0 chrUextra 7292078 7292880 -21711776 - Gypsy4_I LTR Gypsy -735 5553 4743 8 640 5083 2 0 5 chrUextra 7292998 7293589 -21711067 - HOBO DNA hAT -2428 588 1 8 640 3206 63 74 0 chrUextra 7293918 7294550 -21710106 + PROTOP_A DNA P 528 1071 -34 8 640 1536 42 0 0 chrUextra 7294548 7294737 -21709919 + PROTOP_B DNA P 938 1121 -32 8 640 2420 218 35 14 chrUextra 7294838 7295658 -21708998 - SAR_DM Satellite Satellite -565 837 1 8 640 6500 18 12 8 chrUextra 7295758 7296563 -21708093 - R1_DM LINE R1 -1092 4264 3456 8 640 278 0 0 0 chrUextra 7296679 7296711 -21707945 - DM1731_LTR LTR Copia -304 32 1 8 640 3722 4 7 11 chrUextra 7296711 7297161 -21707495 - DM1731_I LTR Copia 0 3976 3529 8 640 2896 9 0 0 chrUextra 7297159 7297498 -21707158 - DM1731_I LTR Copia -591 3385 3047 8 640 717 266 92 37 chrUextra 7297598 7298086 -21706570 - QUASIMODO_I LTR Gypsy -19 6041 5527 8 640 2240 60 33 3 chrUextra 7298078 7298411 -21706245 + PROTOP_B DNA P 176 518 -635 8 640 1350 54 0 0 chrUextra 7299084 7299326 -21705330 + (CTTAT)n Simple_repeat Simple_repeat 1 242 0 8 640 3072 193 14 19 chrUextra 7299438 7300258 -21704398 + SAR_DM Satellite Satellite 1 815 -208 8 640 4053 24 129 0 chrUextra 7300358 7301178 -21703478 - R1_DM LINE R1 -1964 3392 2467 8 640 2413 54 15 3 chrUextra 7301278 7301610 -21703046 - TART LINE telomeric -12097 2380 2045 8 640 2652 58 85 0 chrUextra 7301601 7301977 -21702679 - TART LINE telomeric -12618 1859 1452 8 640 649 123 34 26 chrUextra 7301977 7302094 -21702562 - TART_B1 LINE telomeric -6469 4185 4068 8 640 1721 68 0 0 chrUextra 7302198 7302432 -21702224 - G5_DM LINE Jockey -651 4205 3972 8 640 21 0 0 0 chrUextra 7302463 7302484 -21702172 + AT_rich Low_complexity Low_complexity 1 21 0 8 640 69 13 0 0 chrUextra 7302837 7302913 -21701743 + AT_rich Low_complexity Low_complexity 1 76 0 8 640 6511 20 2 15 chrUextra 7303118 7303938 -21700718 - BATUMI_I LTR Pao -6189 1774 965 8 640 1187 58 6 0 chrUextra 7304038 7304210 -21700446 - ARS406_DM Unknown Unknown -180 173 1 8 640 3174 175 9 11 chrUextra 7304117 7304857 -21699799 + SAR_DM Satellite Satellite 195 933 -539 8 640 3411 31 2 0 chrUextra 7304957 7305379 -21699277 - R1_DM LINE R1 -1800 3556 3134 8 640 3382 17 0 2 chrUextra 7305365 7305776 -21698880 - R1_DM LINE R1 -3063 2293 1884 8 640 5219 31 37 5 chrUextra 7305876 7306695 -21697961 + R1_DM LINE R1 3322 4238 -1118 8 640 6871 11 6 0 chrUextra 7306795 7307614 -21697042 + DMRT1A LINE R1 4224 5047 -136 8 640 1639 0 0 5 chrUextra 7308633 7308829 -21695827 - BLOOD_I LTR Gypsy -6418 195 1 8 640 3180 5 45 0 chrUextra 7308829 7309042 -21695614 - BLOOD_LTR LTR Gypsy 0 399 187 8 640 216 0 0 0 chrUextra 7309042 7309066 -21695590 + (GA)n Simple_repeat Simple_repeat 2 25 0 8 640 3180 5 45 0 chrUextra 7309066 7309231 -21695425 - BLOOD_LTR LTR Gypsy -213 186 5 8 640 1620 0 0 0 chrUextra 7309231 7309450 -21695206 + (CACAA)n Simple_repeat Simple_repeat 1 219 0 8 640 6736 15 28 0 chrUextra 7309552 7310371 -21694285 + Copia2_I LTR Copia 969 1810 -2352 8 640 3420 196 6 5 chrUextra 7310471 7311290 -21693366 - SAR_DM Satellite Satellite -397 1075 256 8 640 1575 173 118 28 chrUextra 7311390 7311856 -21692800 - TART LINE telomeric -5047 9430 8531 8 640 22 56 0 0 chrUextra 7312010 7312046 -21692610 + AT_rich Low_complexity Low_complexity 1 36 0 8 640 313 179 51 102 chrUextra 7312091 7312209 -21692447 + Copia_I LTR Copia 4401 4512 -81 8 640 6129 21 22 0 chrUextra 7312309 7313048 -21691608 + R1_DM LINE R1 1670 2425 -2931 8 640 650 13 0 0 chrUextra 7313048 7313125 -21691531 + ACCORD2_LTR LTR Gypsy 1 77 -138 8 640 3353 185 11 9 chrUextra 7313228 7314031 -21690625 + SAR_DM Satellite Satellite 272 1076 -396 8 640 2702 65 0 0 chrUextra 7315066 7315420 -21689236 - G5_DM LINE Jockey -4105 751 398 8 640 1244 97 0 6 chrUextra 7315411 7315588 -21689068 - G5_DM LINE Jockey -4675 181 6 8 640 6429 10 20 1 chrUextra 7315985 7316645 -21688011 - STALKER4_I LTR Gypsy -543 5987 5329 8 640 183 80 0 0 chrUextra 7316645 7316670 -21687986 + (TATG)n Simple_repeat Simple_repeat 4 28 0 8 640 6429 10 20 1 chrUextra 7316670 7316804 -21687852 - STALKER4_I LTR Gypsy -1202 5328 5179 8 640 593 122 9 0 chrUextra 7316904 7317011 -21687645 - ARS406_DM Unknown Unknown -245 108 1 8 640 3500 171 12 11 chrUextra 7316919 7317718 -21686938 + SAR_DM Satellite Satellite 195 994 -478 8 640 2469 83 28 26 chrUextra 7317824 7318624 -21686032 - DMSAT6 Satellite Satellite -98 801 1 8 640 3150 184 14 28 chrUextra 7318744 7319537 -21685119 + SAR_DM Satellite Satellite 391 1172 -300 8 640 6213 42 2 10 chrUextra 7319662 7320480 -21684176 + BATUMI_I LTR Pao 3082 3893 -4070 8 640 1888 83 0 4 chrUextra 7320580 7320847 -21683809 + R1_DM LINE R1 1321 1586 -3770 8 640 2786 27 75 3 chrUextra 7320852 7321399 -21683257 + R1_DM LINE R1 2264 2849 -2507 8 640 3266 217 4 1 chrUextra 7321537 7322318 -21682338 + Stalker2_I LTR Gypsy 5135 5917 -1485 8 640 6340 18 7 4 chrUextra 7322418 7323237 -21681419 - DM176_I LTR Gypsy -5244 1176 355 8 640 5524 21 0 6 chrUextra 7323337 7324010 -21680646 - R1_DM LINE R1 -2687 2669 2001 8 640 921 67 82 0 chrUextra 7324022 7324156 -21680500 - R1_DM LINE R1 -3739 1617 1473 8 640 3370 197 5 9 chrUextra 7324262 7325075 -21679581 + SAR_DM Satellite Satellite 195 1004 -468 8 640 1066 296 29 35 chrUextra 7325177 7325688 -21678968 - FROGGER_I LTR Copia -1150 927 420 8 640 2405 176 20 50 chrUextra 7326094 7326913 -21677743 + SAR_DM Satellite Satellite 1 794 -515 8 640 6287 9 0 42 chrUextra 7327013 7327832 -21676824 - QUASIMODO_I LTR Gypsy -3990 2070 1286 8 640 3369 111 56 35 chrUextra 7328058 7328751 -21675905 - PROTOP_A DNA P 0 1105 398 8 640 932 0 0 9 chrUextra 7328851 7328960 -21675696 + (TTGTG)n Simple_repeat Simple_repeat 3 110 0 8 640 580 83 0 0 chrUextra 7328961 7329069 -21675587 - PROTOP_B DNA P -507 646 539 8 640 1567 63 93 8 chrUextra 7329061 7329318 -21675338 - PROTOP_A DNA P -602 503 225 8 640 224 0 0 162 chrUextra 7329365 7329575 -21675081 + (CTATA)n Simple_repeat Simple_repeat 3 178 0 8 640 6298 32 2 11 chrUextra 7329770 7330589 -21674067 - BATUMI_I LTR Pao -4302 3661 2850 8 640 1657 5 0 0 chrUextra 7330690 7330880 -21673776 - LSU-rRNA_Dme rRNA rRNA -1071 2829 2640 8 640 2081 28 0 0 chrUextra 7330878 7331130 -21673526 - R1_DM LINE R1 0 5356 5105 8 640 3015 40 0 0 chrUextra 7331133 7331508 -21673148 - R1_DM LINE R1 -571 4785 4411 8 640 4382 8 32 5 chrUextra 7331608 7332201 -21672455 + STALKER4_I LTR Gypsy 5922 6530 0 8 640 1957 0 0 0 chrUextra 7332201 7332427 -21672229 + STALKER4_LTR LTR Gypsy 1 226 -176 8 640 2245 4 0 0 chrUextra 7332527 7332784 -21671872 + LSU-rRNA_Dme rRNA rRNA 2393 2649 -1251 8 640 2728 9 0 0 chrUextra 7332786 7333104 -21671552 + R1_DM LINE R1 5039 5356 0 8 640 1971 13 0 0 chrUextra 7333114 7333346 -21671310 + R1_DM LINE R1 5039 5270 -86 8 640 256 138 156 33 chrUextra 7333459 7333549 -21671107 - QUASIMODO_LTR LTR Gypsy -467 191 91 8 640 1688 30 0 0 chrUextra 7333649 7333884 -21670772 - QUASIMODO_I LTR Gypsy -333 5727 5493 8 640 983 68 34 0 chrUextra 7333895 7334042 -21670614 - QUASIMODO_I LTR Gypsy -885 5175 5024 8 640 1699 0 0 0 chrUextra 7334042 7334240 -21670416 - Copia2_LTR_DM LTR Copia 0 198 1 8 640 7225 0 0 0 chrUextra 7334365 7335184 -21669472 + MAX_I LTR Pao 3358 4176 -3738 8 640 6611 18 13 2 chrUextra 7336203 7337022 -21667634 - R1_DM LINE R1 -805 4551 3724 8 640 1855 321 8 10 chrUextra 7337147 7337941 -21666715 - GTWIN_I LTR Gypsy -2646 3775 2984 8 640 1350 314 63 59 chrUextra 7338091 7338857 -21665799 - MICROPIA_I LTR Gypsy -1830 2646 2093 8 640 530 194 97 0 chrUextra 7339073 7339228 -21665428 - ROO_I LTR Pao -1475 6781 6612 8 640 692 149 337 11 chrUextra 7339218 7339402 -21665254 - ROO_I LTR Pao -2771 5485 5242 8 640 345 91 0 0 chrUextra 7339474 7339529 -21665127 - PROTOP_A DNA P -832 273 219 8 640 364 129 14 28 chrUextra 7339921 7339984 -21664672 - DMTOM1_LTR LTR Gypsy 0 410 349 8 9 552 148 40 16 chrUextra 7339984 7340108 -21664548 - DMTOM1_LTR LTR Gypsy 0 410 284 8 641 248 172 17 17 chrUextra 7340125 7340184 -21664472 - DM176_LTR LTR Gypsy -141 366 308 8 641 248 133 22 0 chrUextra 7340303 7340348 -21664308 - DM176_LTR LTR Gypsy -238 269 224 8 641 1662 73 0 16 chrUextra 7340448 7340698 -21663958 - MDG1_I LTR Gypsy -827 5769 5524 8 641 902 301 12 3 chrUextra 7341293 7341616 -21663040 + Invader4_I LTR Gypsy 1 326 -2087 8 641 4080 27 23 2 chrUextra 7341717 7342238 -21662418 - DOC3_DM LINE Jockey -3398 1342 811 8 641 2259 40 63 0 chrUextra 7342236 7342536 -21662120 - DMCR1A LINE CR1 0 4470 4152 8 641 5639 107 0 0 chrUextra 7342636 7343455 -21661201 + Gypsy_I LTR Gypsy 5298 6116 -391 8 641 2287 272 15 15 chrUextra 7343556 7344373 -21660283 - FROGGER_I LTR Copia -86 1991 1175 8 641 3321 10 3 0 chrUextra 7344474 7344863 -21659793 - DIVER_I LTR Pao -5253 390 1 8 641 1851 9 9 0 chrUextra 7344884 7345106 -21659550 - DIVER_LTR LTR Pao 0 224 1 8 641 1620 0 0 0 chrUextra 7345107 7345287 -21659369 + (TTTTG)n Simple_repeat Simple_repeat 1 180 0 8 641 6613 27 24 0 chrUextra 7345393 7346212 -21658444 + FW_DM LINE Jockey 127 965 -3727 8 641 3302 166 37 33 chrUextra 7346323 7347131 -21657525 + SAR_DM Satellite Satellite 369 1179 -293 8 641 5515 36 25 18 chrUextra 7347231 7347646 -21657010 + DM176_I LTR Gypsy 85 501 -5919 8 641 181 30 29 57 chrUextra 7347646 7347681 -21656975 + (TAA)n Simple_repeat Simple_repeat 3 36 0 8 641 5515 36 25 18 chrUextra 7347681 7348049 -21656607 + DM176_I LTR Gypsy 502 873 -5547 8 641 3643 37 0 2 chrUextra 7348489 7348950 -21655706 - DMCR1A LINE CR1 0 4470 4011 8 641 4807 0 0 0 chrUextra 7349067 7349614 -21655042 + R2_DM LINE R2 3061 3607 0 8 641 450 0 0 0 chrUextra 7349626 7349677 -21654979 + LSU-rRNA_Dme rRNA rRNA 2582 2632 -1268 8 641 1741 5 10 0 chrUextra 7349677 7349885 -21654771 + R1_DM LINE R1 1 210 -5146 8 641 2501 186 66 45 chrUextra 7349987 7350767 -21653889 - SAR_DM Satellite Satellite -1030 796 1 8 641 579 61 194 0 chrUextra 7350903 7351001 -21653655 + DMRT1C LINE R1 5325 5441 -2 8 641 208 200 31 0 chrUextra 7351971 7352036 -21652620 + (TAA)n Simple_repeat Simple_repeat 2 68 0 8 641 22 35 0 0 chrUextra 7352231 7352260 -21652396 + AT_rich Low_complexity Low_complexity 1 29 0 8 641 220 141 46 15 chrUextra 7352547 7352612 -21652044 + (TAA)n Simple_repeat Simple_repeat 2 68 0 8 641 3849 5 2 0 chrUextra 7352739 7353184 -21651472 + DIVER_I LTR Pao 5198 5643 0 8 641 1927 5 0 0 chrUextra 7353184 7353408 -21651248 + DIVER_LTR LTR Pao 1 224 0 8 641 232 133 67 0 chrUextra 7353431 7353551 -21651105 + A-rich Low_complexity Low_complexity 5 132 0 8 641 430 257 19 19 chrUextra 7353657 7353812 -21650844 + Copia2_I LTR Copia 3911 4065 -97 8 641 1470 177 33 36 chrUextra 7354108 7354472 -21650184 + STALKER4_I LTR Gypsy 975 1337 -5193 8 641 2013 15 11 15 chrUextra 7354575 7354848 -21649808 - ACCORD2_I LTR Gypsy -5860 1352 1081 8 641 4155 0 0 2 chrUextra 7354848 7355325 -21649331 + MICROPIA_LTR LTR Gypsy 1 476 0 8 641 535 0 29 0 chrUextra 7355325 7355393 -21649263 + MICROPIA_I LTR Gypsy 1 70 -4406 8 641 2703 3 58 3 chrUextra 7355493 7355835 -21648821 - MDG3_I LTR Gypsy -241 4745 4385 8 641 4001 2 2 0 chrUextra 7355833 7356310 -21648346 - MDG3_I LTR Gypsy -528 4458 3981 8 641 1227 201 32 82 chrUextra 7356453 7356470 -21648186 - HETA LINE telomeric -3103 7360 7348 8 641 198 0 0 0 chrUextra 7356470 7356492 -21648164 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 8 641 1895 206 27 80 chrUextra 7356492 7357229 -21647427 - HETA LINE telomeric -2135 3946 3308 8 641 2872 199 27 14 chrUextra 7357329 7358126 -21646530 + SAR_DM Satellite Satellite 1 807 -208 8 641 508 42 56 0 chrUextra 7358247 7358318 -21646338 - DM176_LTR LTR Gypsy -182 325 251 8 641 2146 11 0 80 chrUextra 7358319 7358621 -21646035 - DM176_LTR LTR Gypsy -224 283 6 8 641 34 55 0 0 chrUextra 7358686 7358741 -21645915 + AT_rich Low_complexity Low_complexity 1 55 0 8 641 2228 53 16 0 chrUextra 7358747 7359065 -21645591 + MDG1_I LTR Gypsy 1193 1515 -5081 8 641 1098 15 7 7 chrUextra 7359165 7359302 -21645354 - PROTOP_A DNA P -968 137 1 8 641 4413 78 86 29 chrUextra 7359302 7359983 -21644673 + Gypsy12_I LTR Gypsy 4568 5287 -259 8 641 2330 99 31 22 chrUextra 7360083 7360901 -21643755 + DMSAT6 Satellite Satellite 1 825 -233 8 641 536 200 0 9 chrUextra 7361077 7361193 -21643463 - DNAREP1_DM LINE Penelope -465 129 15 8 641 6380 32 21 5 chrUextra 7361919 7362737 -21641919 - R1_DM LINE R1 -2111 3245 2415 8 641 647 118 8 70 chrUextra 7362837 7362965 -21641691 + IDEFIX_LTR LTR Gypsy 102 221 -373 8 641 27 0 0 0 chrUextra 7363142 7363169 -21641487 + AT_rich Low_complexity Low_complexity 1 27 0 8 641 2265 126 25 0 chrUextra 7363289 7363655 -21641001 + IDEFIX_I LTR Gypsy 1817 2191 -3437 8 641 7134 1 0 0 chrUextra 7363755 7364573 -21640083 - MAX_I LTR Pao -4496 3418 2601 8 641 3158 36 25 23 chrUextra 7364673 7365272 -21639384 + HETRP_DM Satellite Satellite 1 599 -1284 8 641 781 37 0 0 chrUextra 7365384 7365491 -21639165 + HETRP_DM Satellite Satellite 13 119 -1753 8 641 4792 2 0 0 chrUextra 7365591 7366148 -21638508 - FW_DM LINE Jockey -3672 1020 464 8 641 1524 69 20 8 chrUextra 7366160 7366409 -21638247 + DOC2_DM LINE Jockey 747 998 -3795 8 641 926 9 0 0 chrUextra 7366509 7366624 -21638032 - NTS_DM Other Other -88 152 38 8 641 870 9 0 27 chrUextra 7366624 7366736 -21637920 - NTS_DM Other Other -107 133 25 8 641 22 56 0 0 chrUextra 7366762 7366798 -21637858 + AT_rich Low_complexity Low_complexity 1 36 0 8 641 255 125 0 0 chrUextra 7366811 7366851 -21637805 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 641 246 150 0 0 chrUextra 7366894 7366934 -21637722 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 641 246 150 0 0 chrUextra 7366986 7367026 -21637630 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 641 27 29 0 0 chrUextra 7367031 7367065 -21637591 + AT_rich Low_complexity Low_complexity 1 34 0 8 641 1669 0 0 0 chrUextra 7367137 7367327 -21637329 - LSU-rRNA_Dme rRNA rRNA 0 3900 3711 8 641 1074 15 7 22 chrUextra 7367427 7367566 -21637090 - DOC2_DM LINE Jockey -4647 146 10 8 641 4760 18 0 0 chrUextra 7367673 7368245 -21636411 - DOC2_DM LINE Jockey 0 4793 4222 8 641 3117 188 20 25 chrUextra 7368345 7369161 -21635495 - SAR_DM Satellite Satellite -256 1216 405 8 641 551 176 81 51 chrUextra 7370694 7370891 -21633765 + DMCR1A LINE CR1 4227 4429 -41 8 641 727 20 0 20 chrUextra 7370898 7370999 -21633657 - Gypsy12_LTR LTR Gypsy -1400 936 838 8 641 5493 95 29 5 chrUextra 7372017 7372835 -21631821 + Gypsy12_I LTR Gypsy 1399 2236 -3310 8 641 4707 21 0 0 chrUextra 7373855 7374427 -21630229 - PROTOP_A DNA P -533 572 1 8 641 2025 16 0 0 chrUextra 7374427 7374671 -21629985 + R1_DM LINE R1 2540 2783 -2573 8 641 3236 5 0 3 chrUextra 7374771 7375160 -21629496 + FW_DM LINE Jockey 4304 4691 -1 8 641 1525 42 9 32 chrUextra 7375369 7375589 -21629067 - BATUMI_LTR LTR Pao 0 272 58 8 641 3083 22 0 0 chrUextra 7375689 7376060 -21628596 + R1_DM LINE R1 4986 5356 0 8 641 2946 65 10 5 chrUextra 7376093 7376507 -21628149 + R1_DM LINE R1 1 416 -4940 8 641 3454 179 10 12 chrUextra 7376607 7377420 -21627236 + SAR_DM Satellite Satellite 237 1047 -425 8 641 1771 26 18 0 chrUextra 7377525 7377751 -21626905 + DM176_LTR LTR Gypsy 261 490 -17 8 641 1495 167 96 26 chrUextra 7377749 7378343 -21626313 - HETA LINE telomeric -564 5517 5122 8 641 1062 8 0 0 chrUextra 7378443 7378574 -21626082 + G6_DM LINE Jockey 1901 2031 -11 8 641 468 167 0 11 chrUextra 7378592 7378683 -21625973 - HETRP_DM Satellite Satellite -254 1618 1529 8 641 699 179 6 38 chrUextra 7378820 7378977 -21625679 - HETRP_DM Satellite Satellite -203 1669 1518 8 641 622 184 14 14 chrUextra 7379121 7379259 -21625397 - HETRP_DM Satellite Satellite -203 1669 1532 8 641 3184 189 27 18 chrUextra 7379361 7380179 -21624477 - SAR_DM Satellite Satellite -264 1208 384 8 641 2212 112 58 48 chrUextra 7380302 7381097 -21623559 - DMSAT6 Satellite Satellite 0 803 1 8 641 3413 123 37 83 chrUextra 7381197 7382015 -21622641 + PROTOP_B DNA P 296 1075 -78 8 641 893 180 80 90 chrUextra 7382154 7382466 -21622190 - TIRANT_LTR LTR Gypsy -108 309 1 8 641 965 50 0 92 chrUextra 7382740 7382893 -21621763 - Baggins1 LINE LOA 0 5453 5315 8 641 302 50 0 0 chrUextra 7382889 7382929 -21621727 - Baggins1 LINE LOA -456 4997 4958 8 641 2565 16 0 0 chrUextra 7383033 7383341 -21621315 + MDG1_LTR LTR Gypsy 135 442 0 8 641 4365 6 0 0 chrUextra 7383341 7383851 -21620805 - MDG1_I LTR Gypsy -2239 4357 3848 8 641 268 125 0 0 chrUextra 7383951 7383999 -21620657 - ARS406_DM Unknown Unknown -305 48 1 8 641 3586 181 9 9 chrUextra 7383959 7384769 -21619887 + SAR_DM Satellite Satellite 246 1055 -417 8 641 21 0 0 0 chrUextra 7386414 7386435 -21618221 + AT_rich Low_complexity Low_complexity 1 21 0 8 641 244 86 0 0 chrUextra 7386705 7386740 -21617916 + ARS406_DM Unknown Unknown 155 189 -164 8 641 3340 177 11 21 chrUextra 7386726 7387523 -21617133 - SAR_DM Satellite Satellite -291 1181 393 8 641 1291 0 0 6 chrUextra 7387623 7387779 -21616877 + FW_DM LINE Jockey 23 177 -4515 8 641 3085 203 12 20 chrUextra 7388554 7389358 -21615298 + SAR_DM Satellite Satellite 149 946 -526 8 641 3539 179 43 17 chrUextra 7389458 7390275 -21614381 + SAR_DM Satellite Satellite 180 1017 -455 8 641 7145 16 1 2 chrUextra 7390375 7391192 -21613464 + R1_DM LINE R1 3566 4381 -975 8 641 6161 66 9 12 chrUextra 7391292 7392109 -21612547 - R1_DM LINE R1 -4495 861 48 8 641 7376 1 23 1 chrUextra 7392209 7393026 -21611630 + Gypsy6_I LTR Gypsy 1857 2691 -4321 8 641 3250 157 16 11 chrUextra 7393126 7393943 -21610713 + SAR_DM Satellite Satellite 1 821 -434 8 641 4940 14 7 6 chrUextra 7394043 7394856 -21609800 - STALKER4_I LTR Gypsy -4345 2185 1083 8 641 373 299 101 9 chrUextra 7395000 7395213 -21609443 + MICROPIA_I LTR Gypsy 3434 3850 -626 8 641 560 178 339 0 chrUextra 7395322 7395563 -21609093 - PROTOP DNA P -200 4280 3959 8 641 256 172 109 0 chrUextra 7395562 7395626 -21609030 - PROTOP DNA P -3565 915 845 8 641 2152 193 59 24 chrUextra 7395903 7396445 -21608211 - TAHRE LINE telomeric -2859 7604 7044 8 641 830 169 271 19 chrUextra 7396454 7396694 -21607962 - TART LINE telomeric -4301 10176 9900 8 641 397 41 0 0 chrUextra 7396794 7396843 -21607813 - R1_DM LINE R1 -5307 49 1 8 641 6447 22 1 0 chrUextra 7396876 7397611 -21607045 - R1_DM LINE R1 0 5356 4621 8 641 1458 47 0 0 chrUextra 7397711 7397990 -21606666 + (ATAAG)n Simple_repeat Simple_repeat 1 279 0 8 641 3827 178 9 17 chrUextra 7398628 7399444 -21605212 + SAR_DM Satellite Satellite 303 1111 -361 8 641 2694 50 52 3 chrUextra 7399621 7399964 -21604692 + PROTOP DNA P 1 360 -4120 8 641 1332 195 107 11 chrUextra 7400015 7400362 -21604294 + HETA LINE telomeric 4125 4410 -1671 8 641 6972 17 56 0 chrUextra 7401379 7402196 -21602460 - FW_DM LINE Jockey -93 4599 3737 8 641 5424 3 0 0 chrUextra 7402298 7402879 -21601777 - SSU-rRNA_Dme rRNA rRNA -1414 581 1 8 641 32 0 0 0 chrUextra 7403011 7403043 -21601613 + AT_rich Low_complexity Low_complexity 1 32 0 8 641 3561 107 48 5 chrUextra 7403213 7404030 -21600626 - Gypsy12_I LTR Gypsy -866 4680 3770 8 641 2493 107 11 32 chrUextra 7404130 7404944 -21599712 + DMSAT6 Satellite Satellite 1 796 -92 8 641 2666 184 10 10 chrUextra 7405054 7405864 -21598792 - SAR_DM Satellite Satellite -396 810 1 8 641 579 3 127 6 chrUextra 7405974 7406283 -21598373 + (TA)n Simple_repeat Simple_repeat 1 346 0 8 641 875 206 150 38 chrUextra 7406889 7407322 -21597334 + Gypsy12_LTR LTR Gypsy 1267 1727 -553 8 641 335 137 0 0 chrUextra 7407351 7407402 -21597254 + Gypsy12_LTR LTR Gypsy 2286 2336 0 8 641 1952 71 24 31 chrUextra 7407402 7407694 -21596962 + Gypsy12_I LTR Gypsy 1 290 -5256 8 641 6960 20 21 1 chrUextra 7407798 7408615 -21596041 - STALKER4_I LTR Gypsy -1181 5349 4517 8 641 3689 167 16 24 chrUextra 7408720 7409511 -21595145 - SAR_DM Satellite Satellite -362 1110 326 8 641 1055 0 0 0 chrUextra 7409632 7409765 -21594891 + BLOOD_I LTR Gypsy 6481 6613 0 8 641 3761 0 0 0 chrUextra 7409765 7410164 -21594492 + BLOOD_LTR LTR Gypsy 1 399 0 8 641 233 0 0 161 chrUextra 7410169 7410380 -21594276 + (CACAA)n Simple_repeat Simple_repeat 4 180 0 8 641 228 224 0 0 chrUextra 7410382 7410449 -21594207 + (CAAA)n Simple_repeat Simple_repeat 4 70 0 8 641 3211 16 3 0 chrUextra 7410549 7410913 -21593743 + DMCR1A LINE CR1 4106 4470 0 8 641 292 74 93 0 chrUextra 7410916 7410967 -21593689 + I_DM LINE I 5145 5200 -1031 8 641 750 101 0 9 chrUextra 7410967 7411077 -21593579 - PROTOP_A DNA P 0 1105 997 8 641 1565 62 10 0 chrUextra 7411065 7411260 -21593396 + DIVER2_LTR LTR Pao 189 385 0 8 641 910 28 0 0 chrUextra 7411260 7411366 -21593290 + DIVER2_I LTR Pao 1 106 -4041 8 641 419 179 21 10 chrUextra 7411466 7411562 -21593094 + XDMR_DM Unknown Unknown 255 351 -9 8 641 3459 181 34 21 chrUextra 7411486 7412263 -21592393 - SAR_DM Satellite Satellite -354 1118 332 8 641 3575 190 12 11 chrUextra 7412383 7413187 -21591469 - SAR_DM Satellite Satellite -488 984 180 8 641 758 113 0 0 chrUextra 7413085 7413200 -21591456 + ARS406_DM Unknown Unknown 5 119 -234 8 641 6002 73 21 7 chrUextra 7413300 7414117 -21590539 - IDEFIX_I LTR Gypsy -2187 3441 2614 8 641 4288 40 103 0 chrUextra 7414217 7415034 -21589622 + IDEFIX_I LTR Gypsy 1429 2329 -3299 8 641 5975 33 1 0 chrUextra 7415252 7415950 -21588706 + DMCR1A LINE CR1 2096 2794 -1676 8 641 1341 0 0 0 chrUextra 7416050 7416199 -21588457 + (CACAA)n Simple_repeat Simple_repeat 4 152 0 8 641 5969 5 16 0 chrUextra 7416201 7416866 -21587790 + DMRT1B LINE R1 3544 4219 -964 8 641 220 223 0 55 chrUextra 7417149 7417277 -21587379 + T-rich Low_complexity Low_complexity 5 125 0 8 641 180 0 0 0 chrUextra 7417895 7417915 -21586741 + (A)n Simple_repeat Simple_repeat 1 20 0 8 641 6711 20 10 6 chrUextra 7417915 7418698 -21585958 - R1_DM LINE R1 -760 4596 3811 8 641 2661 98 24 33 chrUextra 7418805 7419614 -21585042 + DMSAT6 Satellite Satellite 1 800 0 8 641 226 268 0 0 chrUextra 7420459 7420530 -21584126 - Gypsy7_I LTR Gypsy -4060 924 854 8 641 4776 155 26 2 chrUextra 7420630 7421444 -21583212 + HETA LINE telomeric 1593 2425 -3656 8 641 653 43 49 28 chrUextra 7421548 7421690 -21582966 + (TAA)n Simple_repeat Simple_repeat 3 147 0 8 641 1144 81 19 0 chrUextra 7421693 7421853 -21582803 - Jockey2 LINE Jockey -177 3251 3089 8 641 1488 19 0 0 chrUextra 7421874 7422088 -21582568 + (TAA)n Simple_repeat Simple_repeat 1 214 0 8 641 1739 15 0 0 chrUextra 7422088 7422285 -21582371 + Copia2_LTR_DM LTR Copia 2 198 0 8 641 696 13 0 0 chrUextra 7422285 7422362 -21582294 + Copia2_I LTR Copia 1 77 -4085 8 641 7138 14 44 5 chrUextra 7422462 7423278 -21581378 - R2_DM LINE R2 -2130 1477 630 8 641 34 24 0 0 chrUextra 7423490 7423531 -21581125 + AT_rich Low_complexity Low_complexity 1 41 0 8 641 4536 168 5 6 chrUextra 7424294 7425110 -21579546 - HETA LINE telomeric -2499 3582 2768 8 641 3256 190 16 22 chrUextra 7425210 7425951 -21578705 + SAR_DM Satellite Satellite 430 1166 -306 8 641 489 193 83 8 chrUextra 7425853 7425973 -21578683 - XDMR Unknown Unknown 0 361 233 8 641 413 129 14 0 chrUextra 7425952 7426022 -21578634 - ARS406_DM Unknown Unknown -282 71 1 8 641 6997 27 9 0 chrUextra 7426126 7426942 -21577714 + R1_DM LINE R1 4325 5147 -209 8 641 989 9 0 0 chrUextra 7427042 7427156 -21577500 - R1_DM LINE R1 -1217 4139 4026 8 641 5725 32 63 7 chrUextra 7427158 7427858 -21576798 - R1_DM LINE R1 -1679 3677 2939 8 641 6810 25 2 1 chrUextra 7427958 7428774 -21575882 + PROTOP_A DNA P 150 966 -139 8 641 1964 44 290 0 chrUextra 7428874 7429167 -21575489 + DOC3_DM LINE Jockey 4363 4740 0 8 641 910 102 232 10 chrUextra 7429172 7429379 -21575277 + PROTOP DNA P 416 668 -3812 8 641 354 98 137 32 chrUextra 7429353 7429448 -21575208 - I_DM LINE I -731 5500 5396 8 641 7151 25 0 0 chrUextra 7429790 7430606 -21574050 - R1_DM LINE R1 -2574 2782 1967 8 641 2627 106 37 18 chrUextra 7430706 7431521 -21573135 + DMSAT6 Satellite Satellite 1 829 -18 8 641 6898 33 1 1 chrUextra 7431622 7432437 -21572219 - R1_DM LINE R1 -3813 1543 729 8 641 3497 175 18 23 chrUextra 7432538 7433332 -21571324 + SAR_DM Satellite Satellite 287 1076 -396 8 641 230 146 18 35 chrUextra 7433297 7433354 -21571302 - XDMR_DM Unknown Unknown 0 360 305 8 641 727 301 43 58 chrUextra 7433468 7433884 -21570772 + Gypsy12_I LTR Gypsy 3823 4232 -1314 8 641 6181 24 6 15 chrUextra 7433541 7434269 -21570387 + CIRCE LINE Composite 1884 2604 -3752 8 641 1450 0 0 12 chrUextra 7434370 7434532 -21570124 - Stalker2_I LTR Gypsy -7242 160 1 8 641 3860 5 0 0 chrUextra 7434532 7434956 -21569700 - Stalker2_LTR LTR Gypsy 0 424 1 8 641 1949 9 66 0 chrUextra 7434956 7435184 -21569472 - DMRT1A LINE R1 -1747 3436 3194 8 641 2398 11 7 4 chrUextra 7435286 7435565 -21569091 + LSU-rRNA_Dme rRNA rRNA 1512 1791 -2109 8 641 2036 0 0 0 chrUextra 7435606 7435823 -21568833 + LSU-rRNA_Dme rRNA rRNA 1788 2004 -1896 8 641 2522 4 0 0 chrUextra 7435824 7436102 -21568554 + R2_DM LINE R2 602 879 -2728 8 641 2840 0 0 9 chrUextra 7436202 7436526 -21568130 + BATUMI_I LTR Pao 7643 7963 0 8 641 2327 28 0 27 chrUextra 7436526 7436817 -21567839 + BATUMI_I LTR Pao 7002 7284 -679 8 641 1520 65 5 5 chrUextra 7436817 7437018 -21567638 + BATUMI_I LTR Pao 1 201 -7762 8 641 3370 196 19 25 chrUextra 7437121 7437932 -21566724 - SAR_DM Satellite Satellite -242 1230 425 8 641 4847 19 21 2 chrUextra 7438034 7438597 -21566059 + R1_DM LINE R1 4783 5356 0 8 641 1733 55 9 0 chrUextra 7438630 7438850 -21565806 + R1_DM LINE R1 1 222 -5134 8 641 1773 132 25 0 chrUextra 7438953 7439233 -21565423 - MAX_LTR LTR Pao -34 287 1 8 641 2455 199 6 8 chrUextra 7439233 7439766 -21564890 - SAR_DM Satellite Satellite -484 988 457 8 641 6156 59 7 8 chrUextra 7439867 7440682 -21563974 - BATUMI_I LTR Pao -1164 6750 5694 8 641 320 138 0 49 chrUextra 7441064 7441125 -21563531 - G5A_DM LINE Jockey -49 2792 2735 8 641 551 111 100 0 chrUextra 7441270 7441360 -21563296 + DNAREP1_DM LINE Penelope 496 594 0 8 641 26 50 0 0 chrUextra 7441416 7441456 -21563200 + AT_rich Low_complexity Low_complexity 1 40 0 8 641 3385 166 9 8 chrUextra 7441698 7442501 -21562155 + BATUMI_I LTR Pao 3923 4802 -3112 8 641 2538 0 0 0 chrUextra 7442614 7442894 -21561762 + MAX_I LTR Pao 7635 7914 0 8 641 2932 6 0 0 chrUextra 7442894 7443215 -21561441 + MAX_LTR LTR Pao 1 321 0 8 641 386 240 60 0 chrUextra 7443215 7443304 -21561352 - MICROPIA_I LTR Gypsy -1702 2774 2680 8 641 7664 0 1 0 chrUextra 7443530 7444346 -21560310 + BEL_I LTR Pao 2833 3649 -1755 8 641 7183 21 4 0 chrUextra 7444446 7445262 -21559394 - R1_DM LINE R1 -1581 3775 2957 8 641 4833 6 4 0 chrUextra 7445362 7445890 -21558766 - R1_DM LINE R1 -4826 530 1 8 641 249 35 0 0 chrUextra 7445890 7445919 -21558737 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2604 8 641 2357 0 0 0 chrUextra 7445928 7446178 -21558478 - LSU-rRNA_Dme rRNA rRNA -1247 2653 2404 8 641 4837 0 0 0 chrUextra 7446278 7446798 -21557858 - STALKER4_I LTR Gypsy -2009 4521 4002 8 641 1242 53 11 66 chrUextra 7446913 7447094 -21557562 - BLOOD_LTR LTR Gypsy -141 258 88 8 641 7289 16 1 0 chrUextra 7447194 7448010 -21556646 - R1_DM LINE R1 -3041 2315 1499 8 641 3690 191 9 11 chrUextra 7448111 7448926 -21555730 + SAR_DM Satellite Satellite 243 1055 -417 8 641 1517 154 14 21 chrUextra 7449107 7449392 -21555264 - PROTOP_B DNA P -4 1149 867 8 641 2377 35 10 0 chrUextra 7449510 7449800 -21554856 - Gypsy7_I LTR Gypsy -1077 3907 3615 8 641 255 125 0 0 chrUextra 7449802 7449842 -21554814 - BURDOCK_I LTR Gypsy -2331 3529 3490 8 641 3512 20 5 0 chrUextra 7450858 7451259 -21553397 - PROTOP_B DNA P -750 403 1 8 641 626 213 20 0 chrUextra 7451260 7451410 -21553246 - IDEFIX_I LTR Gypsy -4677 951 799 8 641 708 235 221 0 chrUextra 7451410 7451614 -21553042 - IDEFIX_I LTR Gypsy -5379 249 1 8 641 251 33 0 0 chrUextra 7451644 7451674 -21552982 + NINJA_I LTR Pao 1955 1984 -4027 8 641 2914 55 0 5 chrUextra 7451774 7452159 -21552497 - BATUMI_I LTR Pao -278 7685 7303 8 641 3200 44 10 7 chrUextra 7452182 7452590 -21552066 + BATUMI_I LTR Pao 6427 6835 -1128 8 641 1425 47 0 5 chrUextra 7452690 7452881 -21551775 + FW_DM LINE Jockey 4503 4692 0 8 641 273 29 0 0 chrUextra 7452889 7452923 -21551733 - R1_DM LINE R1 -3966 1390 1357 8 641 4415 32 97 12 chrUextra 7452923 7453500 -21551156 - R1_DM LINE R1 -4150 1206 581 8 641 288 176 0 0 chrUextra 7454527 7454595 -21550061 + (CTATT)n Simple_repeat Simple_repeat 2 69 0 8 641 3377 0 0 0 chrUextra 7454595 7454956 -21549700 + BEL_LTR LTR Pao 1 361 0 8 641 3563 5 0 0 chrUextra 7454956 7455338 -21549318 + BEL_I LTR Pao 1 382 -5022 8 641 200 0 100 0 chrUextra 7456185 7456225 -21548431 + (TA)n Simple_repeat Simple_repeat 1 44 0 8 641 296 109 36 18 chrUextra 7456375 7456431 -21548225 - HETA LINE telomeric -2570 3511 3455 8 641 3873 114 62 27 chrUextra 7456429 7457161 -21547495 - TART LINE telomeric -4425 10052 9296 8 641 3318 196 25 10 chrUextra 7457268 7458082 -21546574 + SAR_DM Satellite Satellite 246 1071 -401 8 641 1245 7 0 0 chrUextra 7458183 7458318 -21546338 - BLASTOPIA_I LTR Gypsy -2264 2217 2083 8 641 6268 4 0 0 chrUextra 7458303 7458998 -21545658 - BLASTOPIA_I LTR Gypsy -3149 1332 638 8 641 5256 23 10 7 chrUextra 7459098 7459705 -21544951 + ACCORD2_I LTR Gypsy 476 1084 -6128 8 641 1825 10 0 5 chrUextra 7459705 7459913 -21544743 - MICROPIA_LTR LTR Gypsy 0 476 270 8 641 227 0 0 0 chrUextra 7460013 7460040 -21544616 + Invader1_I LTR Gypsy 3160 3186 0 8 641 3840 12 2 0 chrUextra 7460040 7460462 -21544194 + Invader1_LTR LTR Gypsy 1 423 0 8 641 1644 118 98 38 chrUextra 7460462 7460828 -21543828 + STALKER4_I LTR Gypsy 884 1271 -5259 8 641 33 105 0 0 chrUextra 7460931 7461055 -21543601 + AT_rich Low_complexity Low_complexity 1 124 0 8 641 267 242 60 18 chrUextra 7461055 7461223 -21543433 + T-rich Low_complexity Low_complexity 3 177 0 8 641 4726 102 134 14 chrUextra 7461849 7462656 -21542000 - TART LINE telomeric -6605 7872 6969 8 641 7183 27 0 4 chrUextra 7462758 7463573 -21541083 - BATUMI_I LTR Pao -2399 5564 4753 8 641 1620 2 0 2 chrUextra 7463673 7463984 -21540672 + (ATCG)n Simple_repeat Simple_repeat 1 310 0 8 641 184 0 143 0 chrUextra 7463984 7464040 -21540616 + (CAGAT)n Simple_repeat Simple_repeat 3 66 0 8 641 1620 1 0 5 chrUextra 7464040 7464324 -21540332 + (ATCG)n Simple_repeat Simple_repeat 1 282 0 8 641 1378 0 0 12 chrUextra 7464324 7464488 -21540168 + (CGAT)n Simple_repeat Simple_repeat 1 162 0 8 641 6619 1 134 0 chrUextra 7464588 7465403 -21539253 - ROO_I LTR Pao -7185 1071 148 8 641 7254 17 1 1 chrUextra 7465505 7466318 -21538338 + DOC2_DM LINE Jockey 3598 4410 -383 8 641 7351 2 1 2 chrUextra 7466418 7467233 -21537423 + LSU-rRNA_Dme rRNA rRNA 534 1347 -2553 8 641 6354 49 60 1 chrUextra 7467333 7468148 -21536508 + R1_DM LINE R1 259 1121 -4235 8 641 3739 0 0 0 chrUextra 7468248 7468648 -21536008 + NOMAD_LTR LTR Gypsy 119 518 0 8 641 1303 11 0 53 chrUextra 7470312 7470502 -21534154 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 8 641 275 192 0 23 chrUextra 7470504 7470516 -21534140 + polypyrimidine Low_complexity Low_complexity 120 130 0 8 641 1111 45 5 43 chrUextra 7470516 7470703 -21533953 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 8 641 275 192 0 23 chrUextra 7470703 7470823 -21533833 + CT-rich Low_complexity Low_complexity 1 119 0 8 80 4381 4 44 0 chrUextra 7470993 7471808 -21532848 + Invader2_I LTR Gypsy 767 1617 -2975 8 642 2492 115 9 28 chrUextra 7471908 7472723 -21531933 + DMSAT6 Satellite Satellite 1 798 -108 8 642 1522 34 0 0 chrUextra 7472823 7472999 -21531657 + DOC3_DM LINE Jockey 2126 2301 -2439 8 642 2702 43 21 0 chrUextra 7472985 7473313 -21531343 + DOC3_DM LINE Jockey 2520 2854 -1886 8 642 2627 31 89 0 chrUextra 7473312 7473638 -21531018 + DOC3_DM LINE Jockey 3005 3359 -1381 8 642 760 135 0 0 chrUextra 7473738 7473864 -21530792 - ARS406_DM Unknown Unknown -227 126 1 8 642 3532 184 8 11 chrUextra 7473768 7474553 -21530103 + SAR_DM Satellite Satellite 192 973 -499 8 642 267 338 129 7 chrUextra 7475059 7475345 -21529311 - BLASTOPIA_I LTR Gypsy -1 4480 4160 8 642 1389 0 0 0 chrUextra 7475568 7475717 -21528939 + BEL_I LTR Pao 5256 5404 0 8 642 3377 0 0 0 chrUextra 7475717 7476078 -21528578 + BEL_LTR LTR Pao 1 361 0 8 642 928 62 0 0 chrUextra 7476090 7476203 -21528453 - CIRCE LINE Composite -5271 1085 973 8 642 276 29 0 0 chrUextra 7476346 7476380 -21528276 - CIRCE LINE Composite -5386 970 937 8 642 1578 9 0 0 chrUextra 7477415 7477637 -21527019 + (GAGAA)n Simple_repeat Simple_repeat 1 222 0 8 642 7060 10 17 10 chrUextra 7478325 7479128 -21525528 - CIRCE LINE Composite -1859 4497 3689 8 642 5394 5 0 0 chrUextra 7479228 7479835 -21524821 - Copia_I LTR Copia -479 4114 3508 8 642 1886 0 0 0 chrUextra 7479828 7480043 -21524613 - Copia_I LTR Copia -1748 2845 2631 8 642 3904 0 0 12 chrUextra 7480143 7480567 -21524089 + HOBO DNA hAT 2598 3016 0 8 642 3371 197 14 21 chrUextra 7481058 7481873 -21522783 - SAR_DM Satellite Satellite -292 1180 372 8 642 7292 17 1 0 chrUextra 7481973 7482788 -21521868 - Copia2_I LTR Copia -2160 2002 1187 8 642 3482 188 14 20 chrUextra 7482891 7483703 -21520953 + SAR_DM Satellite Satellite 399 1205 -267 8 642 1987 181 8 8 chrUextra 7483815 7484204 -21520452 + SAR_DM Satellite Satellite 1 743 -607 8 642 870 229 16 103 chrUextra 7484204 7484583 -21520073 - XDMR_DM Unknown Unknown -9 351 6 8 642 1987 181 8 8 chrUextra 7484583 7484607 -21520049 + SAR_DM Satellite Satellite 744 792 -558 8 642 4237 2 0 0 chrUextra 7484718 7485173 -21519483 - R2_DM LINE R2 -3003 604 150 8 642 3354 11 0 25 chrUextra 7485140 7485533 -21519123 - LSU-rRNA_Dme rRNA rRNA -1294 2606 2224 8 642 323 111 0 0 chrUextra 7486548 7486593 -21518063 - Baggins1 LINE LOA -647 4806 4762 8 642 3194 44 60 48 chrUextra 7486874 7487363 -21517293 + DM176_LTR LTR Gypsy 1 481 -26 8 642 2198 33 72 43 chrUextra 7487463 7487809 -21516847 + PROTOP_B DNA P 581 936 -217 8 642 301 50 0 0 chrUextra 7487802 7487862 -21516794 + PROTOP_B DNA P 572 631 -522 8 642 2440 51 13 0 chrUextra 7487867 7488180 -21516476 + PROTOP_B DNA P 794 1110 -43 8 642 403 148 267 0 chrUextra 7488177 7488278 -21516378 - DMCR1A LINE CR1 -1125 3345 3218 8 642 3133 205 29 22 chrUextra 7488378 7489185 -21515471 + SAR_DM Satellite Satellite 445 1256 -216 8 642 42 57 0 0 chrUextra 7489333 7489403 -21515253 + AT_rich Low_complexity Low_complexity 1 70 0 8 642 346 166 203 79 chrUextra 7489521 7489698 -21514958 + DNAREP1_DM LINE Penelope 16 214 -380 8 642 891 171 67 11 chrUextra 7489682 7489896 -21514760 - DNAREP1_DM LINE Penelope -262 332 117 8 642 1094 129 31 0 chrUextra 7489912 7490102 -21514554 - DNAREP1_DM LINE Penelope -267 327 6 8 642 1939 118 10 7 chrUextra 7490208 7490506 -21514150 - TART LINE telomeric -7445 7032 6734 8 642 810 262 66 38 chrUextra 7490534 7490946 -21513710 - TART LINE telomeric -1171 13306 13083 8 642 407 75 0 0 chrUextra 7490966 7491023 -21513633 - TART LINE telomeric -10448 4029 3980 8 642 4317 99 77 52 chrUextra 7491128 7491893 -21512763 - Gypsy12_I LTR Gypsy -4762 784 1 8 642 6902 17 32 1 chrUextra 7492038 7492853 -21511803 + STALKER4_I LTR Gypsy 2161 3000 -3530 8 642 363 31 115 10 chrUextra 7492962 7493058 -21511598 + (TATAA)n Simple_repeat Simple_repeat 2 107 0 8 642 472 168 297 30 chrUextra 7493120 7493344 -21511312 - DNAREP1_DM LINE Penelope -251 343 60 8 642 2009 38 4 0 chrUextra 7493347 7493583 -21511073 + Gypsy6A_LTR LTR Gypsy 3 239 -181 8 642 245 132 0 0 chrUextra 7493582 7493620 -21511036 + Gypsy6A_LTR LTR Gypsy 371 408 -12 8 642 1318 14 0 0 chrUextra 7493620 7493768 -21510888 + Gypsy12_LTR LTR Gypsy 1 148 -2188 8 642 3612 5 2 0 chrUextra 7493868 7494261 -21510395 - DIVER_I LTR Pao -5162 481 88 8 642 1750 5 0 0 chrUextra 7494264 7494457 -21510199 - DIVER_LTR LTR Pao -31 193 1 8 642 1620 0 0 0 chrUextra 7494459 7494683 -21509973 + (TTATA)n Simple_repeat Simple_repeat 1 224 0 8 642 2743 89 45 6 chrUextra 7494783 7495598 -21509058 - DMSAT6 Satellite Satellite -74 847 1 8 642 508 0 0 19 chrUextra 7495698 7495804 -21508852 - NOMAD_I LTR Gypsy -755 5817 5714 8 642 530 128 11 0 chrUextra 7495778 7495872 -21508784 - NOMAD_I LTR Gypsy -969 5603 5509 8 642 5987 5 1 5 chrUextra 7495844 7496512 -21508144 - NOMAD_I LTR Gypsy -5706 866 201 8 642 2021 79 4 0 chrUextra 7496889 7497154 -21507502 + Baggins1 LINE LOA 4762 5027 -426 8 642 3277 92 5 36 chrUextra 7497526 7498338 -21506318 - Gypsy12_I LTR Gypsy -4580 966 122 8 642 315 185 250 42 chrUextra 7499415 7499511 -21505145 + HETRP_DM Satellite Satellite 1519 1634 -238 8 642 855 176 12 29 chrUextra 7499559 7499729 -21504927 + HETRP_DM Satellite Satellite 1516 1682 -190 8 642 243 208 0 19 chrUextra 7499772 7499826 -21504830 + HETRP_DM Satellite Satellite 1580 1632 -240 8 642 315 185 250 42 chrUextra 7499873 7499969 -21504687 + HETRP_DM Satellite Satellite 1519 1634 -238 8 642 692 172 20 20 chrUextra 7500017 7500165 -21504491 + HETRP_DM Satellite Satellite 1516 1663 -209 8 642 822 111 8 15 chrUextra 7500309 7500819 -21503837 + RSP Satellite Satellite 1 506 0 8 642 815 79 0 9 chrUextra 7500859 7501082 -21503574 + RSP Satellite Satellite 1 221 0 8 642 3417 184 6 16 chrUextra 7501183 7501996 -21502660 - SAR_DM Satellite Satellite -365 1107 303 8 642 1900 193 12 14 chrUextra 7502096 7502891 -21501765 + SAR_DM Satellite Satellite 1 794 -645 8 642 5295 34 36 0 chrUextra 7503010 7503684 -21500972 - FW_DM LINE Jockey -3674 1018 321 8 642 1035 35 14 0 chrUextra 7503679 7503824 -21500832 - G_DM LINE Jockey 0 4346 4200 8 642 1522 6 0 0 chrUextra 7503924 7504106 -21500550 + NOMAD_I LTR Gypsy 912 1093 -5479 8 642 5072 20 0 3 chrUextra 7504101 7504738 -21499918 + NOMAD_I LTR Gypsy 5499 6133 -439 8 642 23 0 0 0 chrUextra 7505435 7505458 -21499198 + AT_rich Low_complexity Low_complexity 1 23 0 8 642 6719 23 0 0 chrUextra 7505752 7506566 -21498090 + R1_DM LINE R1 3838 4651 -705 8 642 246 150 0 0 chrUextra 7506823 7506863 -21497793 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 642 3842 2 0 0 chrUextra 7506915 7507357 -21497299 + LSU-rRNA_Dme rRNA rRNA 2191 2632 -1268 8 642 1011 8 8 0 chrUextra 7507357 7507480 -21497176 + R1_DM LINE R1 1 124 -5232 8 642 5640 6 0 0 chrUextra 7507584 7508242 -21496414 - QUASIMODO_LTR LTR Gypsy 0 658 1 8 642 487 147 25 49 chrUextra 7508270 7508392 -21496264 + Gypsy12A_LTR LTR Gypsy 1613 1731 -549 8 642 2986 22 149 2 chrUextra 7508494 7509308 -21495348 - R1_DM LINE R1 -1253 4103 3171 8 642 6699 10 17 9 chrUextra 7509408 7510222 -21494434 + CIRCE LINE Composite 3523 4343 -2013 8 642 1442 114 83 47 chrUextra 7510337 7510712 -21493944 + BATUMI_I LTR Pao 292 680 -7283 8 642 3413 31 5 2 chrUextra 7510712 7511136 -21493520 - Gypsy_LTR LTR Gypsy 0 482 58 8 642 6219 30 53 5 chrUextra 7511236 7512050 -21492606 + Gypsy4_I LTR Gypsy 1425 2277 -4011 8 642 1934 62 83 37 chrUextra 7512150 7512498 -21492158 + DM176_LTR LTR Gypsy 132 481 -26 8 642 3005 16 0 3 chrUextra 7512506 7512874 -21491782 - ROVER-LTR_DM LTR Gypsy 0 367 1 8 642 750 11 0 0 chrUextra 7512874 7512964 -21491692 - ROVER-I_DM LTR Gypsy 0 6584 6495 8 642 286 50 0 0 chrUextra 7513073 7513133 -21491523 + PROTOP_B DNA P 572 631 -522 8 642 2281 58 13 0 chrUextra 7513138 7513451 -21491205 + PROTOP_B DNA P 794 1110 -43 8 642 977 147 182 4 chrUextra 7513448 7513673 -21490983 - DMCR1A LINE CR1 -1125 3345 3081 8 642 571 137 178 8 chrUextra 7513760 7513878 -21490778 + DMLTR5 LTR Gypsy 40 177 -89 8 642 3227 46 0 0 chrUextra 7514036 7514453 -21490203 - PROTOP_A DNA P -688 417 1 8 642 839 228 91 13 chrUextra 7514453 7514684 -21489972 - TOM_I LTR Gypsy -2137 3975 3727 8 642 6656 28 0 0 chrUextra 7514892 7515706 -21488950 + R1_DM LINE R1 2100 2913 -2443 8 642 2821 3 0 0 chrUextra 7515806 7516138 -21488518 - ACCORD_LTR LTR Gypsy -226 332 1 8 642 715 41 20 10 chrUextra 7516138 7516236 -21488420 + TART LINE telomeric 7900 7998 -6479 8 642 2241 103 101 23 chrUextra 7516224 7516620 -21488036 + TART LINE telomeric 3597 4023 -10454 8 642 1881 175 9 5 chrUextra 7516720 7517521 -21487135 + SAR_DM Satellite Satellite 1 804 -585 8 642 518 108 81 0 chrUextra 7517650 7517761 -21486895 + TART LINE telomeric 10370 10489 -3988 8 642 34 24 0 0 chrUextra 7517774 7517815 -21486841 + AT_rich Low_complexity Low_complexity 1 41 0 8 642 6768 20 0 0 chrUextra 7518548 7519362 -21485294 - DMRT1A LINE R1 -2383 2800 1987 8 642 6136 44 6 1 chrUextra 7519462 7520276 -21484380 - HETA LINE telomeric -1201 4880 4063 8 642 4447 21 86 2 chrUextra 7520376 7521190 -21483466 - R1_DM LINE R1 -1374 3982 3101 8 642 3138 186 21 21 chrUextra 7521296 7522101 -21482555 - SAR_DM Satellite Satellite -242 1230 426 8 642 6724 10 7 7 chrUextra 7522204 7523018 -21481638 + CIRCE LINE Composite 2168 2981 -3375 8 642 932 297 39 34 chrUextra 7523258 7523899 -21480757 + BLOOD_I LTR Gypsy 1822 2465 -4148 8 642 331 93 19 0 chrUextra 7524091 7524145 -21480511 - ROVER-I_DM LTR Gypsy -6529 55 1 8 642 1870 89 45 64 chrUextra 7524145 7524519 -21480137 - ROVER-LTR_DM LTR Gypsy 0 367 1 8 642 2756 12 0 3 chrUextra 7524519 7524846 -21479810 - CIRCE LINE Composite -1983 4373 4048 8 642 2068 0 4 0 chrUextra 7524946 7525192 -21479464 - NOMAD_LTR LTR Gypsy -271 247 1 8 642 551 6 128 6 chrUextra 7525192 7525505 -21479151 + (TA)n Simple_repeat Simple_repeat 1 350 0 8 642 2139 8 0 4 chrUextra 7525505 7525760 -21478896 + T412LTR LTR LTR 1 254 -227 8 642 5645 97 15 0 chrUextra 7525860 7526674 -21477982 + Gypsy12_I LTR Gypsy 2388 3213 -2333 8 642 2422 111 120 7 chrUextra 7526776 7527217 -21477439 + TART LINE telomeric 7311 7726 -6751 8 642 2003 91 173 35 chrUextra 7527213 7527588 -21477068 + TAHRE LINE telomeric 10013 10439 -24 8 642 3350 163 8 8 chrUextra 7527694 7528399 -21476257 + SAR_DM Satellite Satellite 369 1073 -399 8 642 389 166 0 13 chrUextra 7528419 7528502 -21476154 + SAR_DM Satellite Satellite 974 1046 -426 8 642 685 204 73 52 chrUextra 7529163 7529411 -21475245 - TAHRE LINE telomeric -780 9683 9431 8 642 2368 107 23 16 chrUextra 7530430 7531244 -21473412 + DMSAT6 Satellite Satellite 1 820 -108 8 642 4469 21 70 6 chrUextra 7531344 7532158 -21472498 + R1_DM LINE R1 3492 4357 -999 8 642 2283 0 0 0 chrUextra 7532258 7532530 -21472126 - DOC LINE Jockey -3829 896 625 8 642 3294 81 0 56 chrUextra 7532536 7533071 -21471585 - Gypsy7_I LTR Gypsy -2064 2920 2416 8 642 6745 17 1 1 chrUextra 7534084 7534897 -21469759 - R1_DM LINE R1 -763 4593 3781 8 642 1049 183 28 10 chrUextra 7535940 7536714 -21467942 - SAR_DM Satellite Satellite -680 787 1 8 642 6515 11 60 0 chrUextra 7536823 7537636 -21467020 - STALKER4_I LTR Gypsy -1324 5206 4345 8 642 933 34 0 0 chrUextra 7538431 7538548 -21466108 + (TATTG)n Simple_repeat Simple_repeat 5 121 0 8 642 3382 185 16 10 chrUextra 7538649 7539460 -21465196 + SAR_DM Satellite Satellite 1 816 -396 8 642 2274 171 8 5 chrUextra 7539562 7540375 -21464281 + SAR_DM Satellite Satellite 1 815 -545 8 642 5603 14 1 0 chrUextra 7540475 7541144 -21463512 + Invader1_I LTR Gypsy 2517 3186 0 8 642 1237 7 0 0 chrUextra 7541144 7541288 -21463368 + Invader1_LTR LTR Gypsy 1 144 -279 8 642 5927 20 4 9 chrUextra 7541388 7542153 -21462503 - STALKER4_I LTR Gypsy -4706 1824 1064 8 642 1087 22 7 0 chrUextra 7542301 7542437 -21462219 - FW_DM LINE Jockey -4555 137 1 8 642 5482 27 5 0 chrUextra 7542444 7543114 -21461542 + R1_DM LINE R1 1397 2069 -3287 8 642 2034 200 34 7 chrUextra 7543214 7544027 -21460629 + SAR_DM Satellite Satellite 1 835 -590 8 642 1550 296 51 53 chrUextra 7544130 7544939 -21459717 - MICROPIA_I LTR Gypsy -2004 2472 1666 8 642 22 56 0 0 chrUextra 7545438 7545474 -21459182 + AT_rich Low_complexity Low_complexity 1 36 0 8 642 2523 170 12 11 chrUextra 7545954 7546763 -21457893 - SAR_DM Satellite Satellite -439 809 1 8 642 6531 38 0 4 chrUextra 7546866 7547679 -21456977 - BATUMI_I LTR Pao -2264 5699 4890 8 642 388 257 375 10 chrUextra 7547786 7547994 -21456662 + MICROPIA_I LTR Gypsy 1396 1679 -2797 8 642 4723 40 2 0 chrUextra 7547997 7548592 -21456064 - DMCR1A LINE CR1 0 4470 3875 8 642 2457 186 66 40 chrUextra 7548692 7549501 -21455155 + TAHRE LINE telomeric 9102 9833 -630 8 642 1215 14 0 0 chrUextra 7549605 7549752 -21454904 - NTS_DM Other Other -93 147 1 8 642 1836 8 17 13 chrUextra 7549752 7549991 -21454665 - NTS_DM Other Other 0 240 1 8 642 1835 4 17 13 chrUextra 7549991 7550230 -21454426 - NTS_DM Other Other 0 240 1 8 642 1163 49 21 27 chrUextra 7550230 7550418 -21454238 - NTS_DM Other Other 0 240 54 8 642 5111 51 46 9 chrUextra 7550544 7551331 -21453325 - DM297_I LTR Gypsy 0 6167 5352 8 642 2409 101 5 53 chrUextra 7551431 7551827 -21452829 + Gypsy12_LTR LTR Gypsy 1937 2313 -23 8 642 682 198 199 58 chrUextra 7551822 7552238 -21452418 + TAHRE LINE telomeric 10015 10489 -3988 8 642 294 260 101 24 chrUextra 7552504 7552796 -21451860 + TART LINE telomeric 10958 11056 -3421 8 642 2239 197 10 12 chrUextra 7553494 7554070 -21450586 + SAR_DM Satellite Satellite 482 1056 -416 8 642 5540 95 1 1 chrUextra 7554171 7554983 -21449673 - S_DM DNA Tc1 -549 1187 376 8 642 4917 81 3 8 chrUextra 7555092 7555896 -21448760 + G_DM LINE Jockey 757 1551 -491 8 642 3220 191 17 21 chrUextra 7555996 7556802 -21447854 + SAR_DM Satellite Satellite 1 803 -226 8 642 6576 14 1 2 chrUextra 7556912 7557722 -21446934 - STALKER4_I LTR Gypsy -4542 1988 1180 8 642 598 11 0 132 chrUextra 7558431 7558635 -21446021 + (CAAAAA)n Simple_repeat Simple_repeat 3 179 0 8 642 7018 0 0 0 chrUextra 7558735 7559548 -21445108 + DOC LINE Jockey 289 1101 -3624 8 642 1579 318 10 6 chrUextra 7559649 7560276 -21444380 + HMSBEAGLE_I LTR Gypsy 1452 2080 -4449 8 642 27 29 0 0 chrUextra 7560673 7560707 -21443949 + AT_rich Low_complexity Low_complexity 1 34 0 8 642 250 33 0 0 chrUextra 7560946 7560976 -21443680 + Baggins1 LINE LOA 4727 4756 -697 8 642 664 73 324 0 chrUextra 7560984 7561120 -21443536 - FB4_DM DNA Tc1 -3907 182 3 8 642 1715 84 35 23 chrUextra 7561474 7561813 -21442843 - Gypsy6A_LTR LTR Gypsy -77 343 1 8 642 757 109 0 0 chrUextra 7561813 7561932 -21442724 - NTS_DM Other Other -115 125 7 8 642 261 125 21 0 chrUextra 7562026 7562074 -21442582 - NTS_DM Other Other -191 49 1 8 642 566 115 106 29 chrUextra 7562074 7562244 -21442412 - NTS_DM Other Other 0 240 58 8 642 471 15 0 29 chrUextra 7562387 7562456 -21442200 + BATUMI_I LTR Pao 7895 7961 -2 8 642 2214 17 0 30 chrUextra 7562458 7562753 -21441903 + BATUMI_I LTR Pao 6999 7284 -679 8 642 48 0 0 0 chrUextra 7564439 7564487 -21440169 + AT_rich Low_complexity Low_complexity 1 48 0 8 642 1620 23 27 5 chrUextra 7565126 7565782 -21438874 + (AGATG)n Simple_repeat Simple_repeat 1 670 0 8 642 987 89 0 0 chrUextra 7565782 7565939 -21438717 + (ACATG)n Simple_repeat Simple_repeat 5 161 0 8 642 3386 174 15 16 chrUextra 7566050 7566844 -21437812 + SAR_DM Satellite Satellite 326 1118 -354 8 642 3251 193 14 18 chrUextra 7566952 7567765 -21436891 - SAR_DM Satellite Satellite -545 809 1 8 642 4661 62 20 3 chrUextra 7567865 7568514 -21436142 - QUASIMODO_I LTR Gypsy -5371 689 30 8 642 1341 6 0 0 chrUextra 7568521 7568678 -21435978 - QUASIMODO_LTR LTR Gypsy -51 607 451 8 642 1601 11 0 0 chrUextra 7568778 7568969 -21435687 + DOC5_DM LINE Jockey 4461 4651 -31 8 642 260 0 57 0 chrUextra 7568969 7569004 -21435652 + (TATAA)n Simple_repeat Simple_repeat 5 41 0 8 642 3313 180 14 15 chrUextra 7569706 7570501 -21434155 + SAR_DM Satellite Satellite 326 1119 -353 8 642 3738 5 0 2 chrUextra 7570605 7571042 -21433614 - FW_DM LINE Jockey -806 3886 3451 8 642 3204 28 2 2 chrUextra 7572430 7572824 -21431832 - ROO_LTR LTR Pao -34 394 1 8 642 3503 5 0 0 chrUextra 7572824 7573243 -21431413 + LSU-rRNA_Dme rRNA rRNA 557 975 -2925 8 642 2407 137 111 36 chrUextra 7573345 7574149 -21430507 - TART LINE telomeric -6799 7678 7200 8 642 2424 3 0 7 chrUextra 7574256 7574548 -21430108 + BATUMI_I LTR Pao 7674 7963 0 8 642 1959 50 3 88 chrUextra 7574548 7574873 -21429783 + BATUMI_I LTR Pao 7002 7298 -665 8 642 1004 132 10 24 chrUextra 7574860 7575069 -21429587 + TAHRE LINE telomeric 10218 10423 -40 8 642 3353 181 8 14 chrUextra 7575176 7575981 -21428675 + SAR_DM Satellite Satellite 195 994 -478 8 642 6834 10 14 2 chrUextra 7576082 7576895 -21427761 + CIRCE LINE Composite 3655 4476 -1880 8 642 518 16 0 0 chrUextra 7576995 7577059 -21427597 - R1_DM LINE R1 -2899 2457 2394 8 642 6040 34 1 0 chrUextra 7577061 7577808 -21426848 - R1_DM LINE R1 -3291 2065 1318 8 642 6904 16 4 0 chrUextra 7577908 7578720 -21425936 - R2_DM LINE R2 -1759 1848 1034 8 642 2345 99 18 50 chrUextra 7578820 7579621 -21425035 - DMSAT6 Satellite Satellite -3 775 1 8 642 3781 73 10 2 chrUextra 7580644 7581152 -21423504 + Gypsy12_I LTR Gypsy 5035 5546 0 8 642 1465 171 13 27 chrUextra 7581152 7581453 -21423203 + Gypsy12_LTR LTR Gypsy 1 297 -2039 8 642 2049 55 24 3 chrUextra 7581556 7581848 -21422808 - TART LINE telomeric -12135 2342 2045 8 642 2802 62 54 0 chrUextra 7581839 7582226 -21422430 - TART LINE telomeric -12618 1859 1452 8 642 633 115 43 26 chrUextra 7582226 7582342 -21422314 - TART_B1 LINE telomeric -6469 4185 4068 8 642 2047 4 4 4 chrUextra 7582468 7582712 -21421944 - BEL_LTR LTR Pao -117 244 1 8 642 4651 3 0 0 chrUextra 7582712 7583280 -21421376 - TRANSPAC_I LTR Gypsy -345 4245 3678 8 642 2557 98 2 10 chrUextra 7584294 7584697 -21419959 + HETA LINE telomeric 2788 3187 -2894 8 642 952 163 63 18 chrUextra 7584819 7585101 -21419555 + TART LINE telomeric 9364 9646 -4831 8 642 1573 135 188 0 chrUextra 7585205 7585524 -21419132 - DOC LINE Jockey -1541 3184 2806 8 642 1741 86 299 49 chrUextra 7585521 7586015 -21418641 - DOC LINE Jockey -2108 2617 2001 8 642 3318 178 10 11 chrUextra 7586119 7586904 -21417752 + SAR_DM Satellite Satellite 293 1076 -396 8 642 3315 179 15 16 chrUextra 7587028 7587827 -21416829 + SAR_DM Satellite Satellite 304 1101 -371 8 642 503 243 7 7 chrUextra 7587943 7588096 -21416560 + IDEFIX_I LTR Gypsy 365 517 -5111 8 642 831 256 169 6 chrUextra 7588126 7588452 -21416204 + IDEFIX_I LTR Gypsy 676 1054 -4574 8 642 615 0 0 0 chrUextra 7588469 7588540 -21416116 + DOC3_DM LINE Jockey 1 71 -4669 8 642 1636 42 0 0 chrUextra 7588538 7588752 -21415904 + DOC3_DM LINE Jockey 643 856 -3884 8 642 1197 0 0 0 chrUextra 7588852 7588998 -21415658 - QUASIMODO_LTR LTR Gypsy -512 146 1 8 642 51 31 0 0 chrUextra 7588998 7589063 -21415593 + AT_rich Low_complexity Low_complexity 1 65 0 8 642 345 91 0 0 chrUextra 7589383 7589438 -21415218 + PROTOP_A DNA P 219 273 -832 8 642 1413 34 0 0 chrUextra 7589489 7589664 -21414992 - QUASIMODO_I LTR Gypsy -5513 547 373 8 642 995 108 19 0 chrUextra 7590148 7590305 -21414351 + DNAREP1_DM LINE Penelope 6 165 -429 8 642 589 143 115 19 chrUextra 7590361 7590518 -21414138 + DNAREP1_DM LINE Penelope 120 291 -303 8 642 1532 220 146 68 chrUextra 7590676 7591437 -21413219 - Gypsy12_LTR LTR Gypsy -838 1498 679 8 642 1577 40 0 0 chrUextra 7591588 7591787 -21412869 - FW_DM LINE Jockey -4493 199 1 8 642 4821 30 18 2 chrUextra 7591795 7592400 -21412256 + R1_DM LINE R1 1377 1991 -3365 8 642 2403 30 20 0 chrUextra 7593412 7593714 -21410942 - CIRCE LINE Composite -6048 308 1 8 642 961 68 0 0 chrUextra 7593714 7593846 -21410810 - CIRCE LINE Composite 0 6356 6225 8 642 2919 31 76 0 chrUextra 7593843 7594224 -21410432 - CIRCE LINE Composite -364 5992 5583 8 642 6664 25 0 0 chrUextra 7594324 7595136 -21409520 - NINJA_I LTR Pao -1860 4151 3340 8 642 6072 14 0 1 chrUextra 7595236 7595960 -21408696 + DOC2_DM LINE Jockey 4047 4769 -24 8 642 2927 212 12 10 chrUextra 7596148 7596957 -21407699 - SAR_DM Satellite Satellite -416 1056 246 8 642 2209 118 25 11 chrUextra 7597064 7597872 -21406784 - DMSAT6 Satellite Satellite -6 818 1 8 642 6011 16 49 10 chrUextra 7597972 7598784 -21405872 - FW_DM LINE Jockey -293 4399 3556 8 642 1599 4 0 0 chrUextra 7598885 7599115 -21405541 + (TTGTG)n Simple_repeat Simple_repeat 1 230 0 8 642 4980 7 0 0 chrUextra 7599115 7599696 -21404960 - DMRT1B LINE R1 -864 4319 3739 8 642 589 292 34 78 chrUextra 7599925 7600607 -21404049 - GTWIN_I LTR Gypsy -2883 3538 3053 8 642 345 43 0 0 chrUextra 7600561 7600608 -21404048 - TLD2 Unknown Unknown 0 218 172 8 642 292 214 0 0 chrUextra 7600798 7600854 -21403802 + Gypsy12A_LTR LTR Gypsy 409 464 -1816 8 642 723 251 153 81 chrUextra 7600963 7601518 -21403138 + Gypsy12_LTR LTR Gypsy 679 1273 -1063 8 80 3182 55 135 2 chrUextra 7601620 7602432 -21402224 - R1_DM LINE R1 -4357 999 80 8 643 5026 22 3 2 chrUextra 7602532 7603161 -21401495 - PROTOP_A DNA P -475 630 1 8 643 4532 2 14 0 chrUextra 7603444 7604016 -21400640 + DOC6_DM LINE Jockey 3643 4222 0 8 643 689 0 117 0 chrUextra 7604027 7604251 -21400405 + (TTA)n Simple_repeat Simple_repeat 1 250 0 8 643 3802 51 40 0 chrUextra 7604358 7604864 -21399792 + TART_B1 LINE telomeric 3000 3525 -7129 8 643 2157 84 13 3 chrUextra 7604858 7605167 -21399489 + TART_B1 LINE telomeric 4319 4630 -6024 8 643 2611 7 0 0 chrUextra 7605270 7605574 -21399082 - MDG3_I LTR Gypsy -4682 304 1 8 643 2048 22 4 50 chrUextra 7605573 7605853 -21398803 - MDG3_LTR LTR Gypsy 0 267 1 8 643 1234 33 17 17 chrUextra 7605853 7606012 -21398644 + FW_DM LINE Jockey 1668 1902 -2790 8 643 7043 2 0 0 chrUextra 7606180 7606992 -21397664 - DOC LINE Jockey -905 3820 3009 8 643 6561 20 31 2 chrUextra 7607092 7607904 -21396752 + MAX_I LTR Pao 2937 3771 -4143 8 643 6799 19 0 0 chrUextra 7608004 7608815 -21395841 - FW_DM LINE Jockey -350 4342 3532 8 643 31 26 0 0 chrUextra 7609448 7609486 -21395170 + AT_rich Low_complexity Low_complexity 1 38 0 8 643 5729 95 1 0 chrUextra 7609828 7610640 -21394016 + Gypsy12_I LTR Gypsy 2995 3807 -1739 8 643 1104 195 4 4 chrUextra 7610740 7610998 -21393658 - SAR_DM Satellite Satellite -719 753 496 8 643 644 63 53 0 chrUextra 7611003 7611098 -21393558 + ARS406_DM Unknown Unknown 90 189 -164 8 643 2407 166 21 6 chrUextra 7611013 7611540 -21393116 - SAR_DM Satellite Satellite -569 903 369 8 643 3200 8 5 0 chrUextra 7611652 7612039 -21392617 - QUASIMODO_I LTR Gypsy -3485 2575 2187 8 643 1328 0 22 16 chrUextra 7612564 7612747 -21391909 + NTS_DM Other Other 57 240 0 8 643 1831 0 17 17 chrUextra 7612747 7612987 -21391669 + NTS_DM Other Other 1 240 0 8 643 1301 6 0 18 chrUextra 7612987 7613152 -21391504 + NTS_DM Other Other 1 162 -78 8 643 488 119 36 0 chrUextra 7613262 7613346 -21391310 + NTS_DM Other Other 4 90 -150 8 643 2394 99 15 14 chrUextra 7613479 7614287 -21390369 - DMSAT6 Satellite Satellite -71 809 1 8 643 5315 61 53 3 chrUextra 7614388 7615141 -21389515 - R1_DM LINE R1 -4565 791 1 8 643 3422 28 52 1 chrUextra 7615300 7616112 -21388544 - R1_DM LINE R1 -1489 3867 3015 8 643 5821 25 2 69 chrUextra 7616212 7617024 -21387632 + Gypsy12_LTR LTR Gypsy 364 1121 -1215 8 643 6068 44 33 12 chrUextra 7617124 7617936 -21386720 + R1_DM LINE R1 1000 1828 -3528 8 643 1315 23 103 0 chrUextra 7618036 7618210 -21386446 - PROTOP_B DNA P -961 192 1 8 643 756 59 10 0 chrUextra 7618948 7619050 -21385606 + PROTOP_B DNA P 1008 1110 -43 8 643 977 147 182 4 chrUextra 7619047 7619272 -21385384 - DMCR1A LINE CR1 -1125 3345 3081 8 643 997 163 102 15 chrUextra 7619359 7619564 -21385092 + DMLTR5 LTR Gypsy 40 262 -4 8 643 1084 105 41 20 chrUextra 7619565 7619760 -21384896 + HMSBEAGLE_I LTR Gypsy 2 200 -6329 8 643 1273 199 162 20 chrUextra 7619860 7620280 -21384376 + TAHRE LINE telomeric 9352 9728 -735 8 643 550 191 338 49 chrUextra 7620274 7620620 -21384036 + HETA LINE telomeric 5465 5910 -171 8 643 34 24 0 0 chrUextra 7620630 7620671 -21383985 + AT_rich Low_complexity Low_complexity 1 41 0 8 643 6796 23 0 0 chrUextra 7620772 7621584 -21383072 - DIVER_I LTR Pao -2542 3101 2290 8 643 4371 25 51 0 chrUextra 7621684 7622237 -21382419 + DMCR1A LINE CR1 3890 4470 0 8 643 954 13 428 0 chrUextra 7622274 7622496 -21382160 + DOC2_DM LINE Jockey 1566 1882 -2911 8 643 393 74 0 0 chrUextra 7622596 7622650 -21382006 + Gypsy12_I LTR Gypsy 1501 1554 -3992 8 643 2091 111 12 12 chrUextra 7622657 7622976 -21381680 + Gypsy12_I LTR Gypsy 1503 1821 -3725 8 643 2865 87 60 18 chrUextra 7622973 7623407 -21381249 + Gypsy12_I LTR Gypsy 4465 4916 -630 8 643 259 258 15 15 chrUextra 7623507 7623574 -21381082 + (TATG)n Simple_repeat Simple_repeat 4 70 0 8 643 547 212 0 22 chrUextra 7623576 7623759 -21380897 + (TA)n Simple_repeat Simple_repeat 2 180 0 8 643 402 318 0 0 chrUextra 7623738 7623917 -21380739 + (TATATG)n Simple_repeat Simple_repeat 2 180 0 8 643 300 231 0 0 chrUextra 7623917 7623969 -21380687 + (CATG)n Simple_repeat Simple_repeat 2 53 0 8 643 1299 37 0 0 chrUextra 7624418 7624579 -21380077 + Invader6_LTR LTR Gypsy 233 393 0 8 643 585 152 223 4 chrUextra 7624579 7624815 -21379841 + MAX_I LTR Pao 280 567 -7347 8 643 1451 62 4 0 chrUextra 7625004 7625229 -21379427 - S_DM DNA Tc1 0 1736 1511 8 643 1620 9 0 0 chrUextra 7625329 7625646 -21379010 + (TATAA)n Simple_repeat Simple_repeat 1 317 0 8 643 4090 2 2 6 chrUextra 7625650 7626140 -21378516 + POGO DNA Pogo 1 488 -1633 8 643 21 89 0 0 chrUextra 7626839 7626895 -21377761 + AT_rich Low_complexity Low_complexity 1 56 0 8 643 1724 5 0 0 chrUextra 7627151 7627351 -21377305 + DMCR1A LINE CR1 2737 2936 -1534 8 643 4862 33 28 2 chrUextra 7627350 7627962 -21376694 + DMCR1A LINE CR1 3460 4087 -383 8 643 6325 40 7 1 chrUextra 7628062 7628873 -21375783 + R1_DM LINE R1 2208 3023 -2333 8 643 4350 6 2 4 chrUextra 7628973 7629486 -21375170 - R2_DM LINE R2 -3093 514 3 8 643 2639 0 0 0 chrUextra 7629485 7629784 -21374872 + R2_DM LINE R2 1524 1822 -1785 8 643 3160 194 29 23 chrUextra 7629884 7630695 -21373961 + SAR_DM Satellite Satellite 1 815 -208 8 643 803 217 15 0 chrUextra 7630795 7630998 -21373658 - SAR_DM Satellite Satellite -731 741 536 8 643 2338 75 32 20 chrUextra 7631001 7631417 -21373239 + Gypsy6A_LTR LTR Gypsy 1 420 0 8 643 873 52 5 180 chrUextra 7631417 7631606 -21373050 + Gypsy6_I LTR Gypsy 1 156 -6856 8 643 1071 0 0 0 chrUextra 7632398 7632517 -21372139 + (TTCTC)n Simple_repeat Simple_repeat 2 120 0 8 643 21 0 0 0 chrUextra 7632897 7632918 -21371738 + AT_rich Low_complexity Low_complexity 1 21 0 8 643 2971 183 34 27 chrUextra 7633528 7634335 -21370321 + SAR_DM Satellite Satellite 419 1230 -242 8 643 3202 184 19 16 chrUextra 7634439 7635250 -21369406 - SAR_DM Satellite Satellite -455 1017 205 8 643 1054 40 126 0 chrUextra 7635350 7635501 -21369155 + CIRCE LINE Composite 5823 5992 -364 8 643 961 68 0 0 chrUextra 7635498 7635630 -21369026 + CIRCE LINE Composite 6225 6356 0 8 643 2704 31 87 0 chrUextra 7635630 7635986 -21368670 + CIRCE LINE Composite 1 387 -5969 8 643 467 160 103 71 chrUextra 7636005 7636160 -21368496 - Gypsy12_LTR LTR Gypsy -1167 1169 1010 8 643 6465 37 10 0 chrUextra 7636261 7637072 -21367584 + R1_DM LINE R1 1169 1987 -3369 8 643 661 123 0 0 chrUextra 7637172 7637286 -21367370 - ARS406_DM Unknown Unknown -239 114 1 8 643 3083 199 10 11 chrUextra 7637193 7637983 -21366673 + SAR_DM Satellite Satellite 195 983 -489 8 643 4663 71 53 23 chrUextra 7638083 7638894 -21365762 - STALKER4_I LTR Gypsy -4964 1566 732 8 643 5928 55 2 15 chrUextra 7638994 7639805 -21364851 + CIRCE LINE Composite 1895 2695 -3661 8 643 3300 225 23 27 chrUextra 7639905 7641612 -21363044 - SAR_DM Satellite Satellite -469 1701 1 8 643 2443 178 7 16 chrUextra 7641727 7642293 -21362363 - SAR_DM Satellite Satellite -416 1056 496 8 643 657 53 53 0 chrUextra 7642298 7642393 -21362263 + ARS406_DM Unknown Unknown 90 189 -164 8 643 989 162 39 9 chrUextra 7642308 7642538 -21362118 - SAR_DM Satellite Satellite -569 903 667 8 643 247 250 0 0 chrUextra 7643003 7643067 -21361589 - ZAM_I LTR Gypsy -3793 3697 3634 8 643 3214 173 17 27 chrUextra 7643549 7644355 -21360301 + SAR_DM Satellite Satellite 384 1181 -291 8 643 1868 85 11 4 chrUextra 7644462 7644734 -21359922 - MDG1_LTR LTR Gypsy -46 396 123 8 643 294 87 0 0 chrUextra 7644739 7644785 -21359871 + (TTA)n Simple_repeat Simple_repeat 3 48 0 8 643 1754 142 13 0 chrUextra 7645371 7645688 -21358968 + STALKER4_I LTR Gypsy 239 559 -5971 8 643 1824 142 101 21 chrUextra 7645696 7646182 -21358474 + STALKER4_I LTR Gypsy 235 868 -5662 8 643 2895 121 53 63 chrUextra 7646285 7646949 -21357707 - HETA LINE telomeric -5096 985 329 8 643 1001 95 6 23 chrUextra 7646921 7647093 -21357563 - TART LINE telomeric -6131 8346 8178 8 643 2680 200 22 19 chrUextra 7647198 7648000 -21356656 + SAR_DM Satellite Satellite 195 1256 -216 8 643 3668 2 0 2 chrUextra 7648104 7648528 -21356128 + ROO_LTR LTR Pao 6 428 0 8 643 1532 176 194 3 chrUextra 7648528 7648910 -21355746 - Gypsy3_I LTR Gypsy -1233 4944 4490 8 643 2448 286 10 4 chrUextra 7649015 7649826 -21354830 + FROGGER_I LTR Copia 704 1519 -558 8 643 1265 0 0 0 chrUextra 7649926 7650076 -21354580 + DM176_I LTR Gypsy 6271 6420 0 8 643 4232 14 0 0 chrUextra 7650076 7650583 -21354073 + DM176_LTR LTR Gypsy 1 507 0 8 643 807 159 0 0 chrUextra 7650585 7650736 -21353920 + (TA)n Simple_repeat Simple_repeat 2 152 0 8 643 6197 19 47 0 chrUextra 7650837 7651646 -21353010 - STALKER4_I LTR Gypsy -4164 2366 1520 8 643 702 119 8 0 chrUextra 7651748 7651874 -21352782 - ARS406_DM Unknown Unknown -226 127 1 8 643 3264 178 9 13 chrUextra 7651781 7652559 -21352097 + SAR_DM Satellite Satellite 195 969 -503 8 643 1648 184 48 4 chrUextra 7652659 7653470 -21351186 - SAR_DM Satellite Satellite -694 846 1 8 643 932 60 6 18 chrUextra 7653570 7654372 -21350284 + RSP Satellite Satellite 1 792 0 8 643 6717 20 2 0 chrUextra 7654481 7655292 -21349364 + TAHRE LINE telomeric 4874 5686 -4777 8 643 6744 6 30 0 chrUextra 7655392 7656203 -21348453 - DMRT1B LINE R1 -2089 3094 2260 8 643 3498 184 9 6 chrUextra 7656306 7657114 -21347542 + SAR_DM Satellite Satellite 224 1033 -439 8 643 6940 2 1 0 chrUextra 7657214 7658025 -21346631 - ROO_I LTR Pao -2238 6018 5207 8 643 3098 183 10 11 chrUextra 7658130 7658936 -21345720 - SAR_DM Satellite Satellite -216 1256 180 8 643 590 163 382 0 chrUextra 7659036 7659206 -21345450 - Gypsy5_I LTR Gypsy -6002 507 273 8 643 1506 125 118 0 chrUextra 7659208 7659495 -21345161 + MAX_LTR LTR Pao 1 321 0 8 643 2143 39 3 114 chrUextra 7659495 7659847 -21344809 + MAX_I LTR Pao 1 313 -7601 8 643 5775 59 78 0 chrUextra 7659947 7660758 -21343898 + Baggins1 LINE LOA 4355 5228 -225 8 643 3044 192 15 26 chrUextra 7660858 7661664 -21342992 + SAR_DM Satellite Satellite 434 1230 -242 8 643 3705 57 44 19 chrUextra 7661954 7662579 -21342077 - PROTOP_A DNA P 0 1153 572 8 643 2656 143 32 19 chrUextra 7662680 7664401 -21340255 + DMSAT6 Satellite Satellite 1 1742 -64 8 643 5717 95 0 0 chrUextra 7664502 7665309 -21339347 - Gypsy12_I LTR Gypsy -1893 3653 2847 8 643 6705 14 0 6 chrUextra 7665412 7666222 -21338434 + FW_DM LINE Jockey 1618 2422 -2270 8 643 6560 31 2 0 chrUextra 7666322 7667132 -21337524 + DIVER2_I LTR Pao 611 1422 -2725 8 643 934 0 9 0 chrUextra 7667232 7667342 -21337314 - ROO_I LTR Pao -8145 111 1 8 643 3742 2 0 0 chrUextra 7667342 7667770 -21336886 - ROO_LTR LTR Pao 0 428 1 8 643 1810 73 0 0 chrUextra 7667770 7668042 -21336614 + IDEFIX_I LTR Gypsy 5032 5303 -325 8 643 5323 94 38 11 chrUextra 7668142 7668952 -21335704 + Gypsy12_I LTR Gypsy 831 1662 -3884 8 643 3139 181 10 21 chrUextra 7669052 7669858 -21334798 - SAR_DM Satellite Satellite -481 991 195 8 643 2137 186 23 17 chrUextra 7670032 7670563 -21334093 + SAR_DM Satellite Satellite 543 1076 -396 8 643 717 200 35 15 chrUextra 7670574 7670772 -21333884 + SAR_DM Satellite Satellite 543 744 -728 8 643 35 0 0 0 chrUextra 7670935 7670970 -21333686 + AT_rich Low_complexity Low_complexity 1 35 0 8 643 2238 159 86 3 chrUextra 7670988 7671524 -21333132 - Gypsy5_I LTR Gypsy -1239 5270 4691 8 643 993 88 7 0 chrUextra 7671535 7671682 -21332974 - Gypsy5_I LTR Gypsy -2234 4275 4128 8 643 6359 22 54 0 chrUextra 7671782 7672592 -21332064 - R1_DM LINE R1 -110 5246 4393 8 643 6320 26 1 20 chrUextra 7672692 7673502 -21331154 + QUASIMODO_I LTR Gypsy 81 875 -5185 8 643 3460 184 8 8 chrUextra 7673602 7674405 -21330251 - SAR_DM Satellite Satellite -446 1026 224 8 643 387 118 0 0 chrUextra 7674344 7674412 -21330244 + ARS406_DM Unknown Unknown 2 69 -284 8 643 4908 4 128 1 chrUextra 7674512 7675274 -21329382 - DMRT1B LINE R1 -3612 1571 713 8 643 383 0 0 0 chrUextra 7675275 7675322 -21329334 - QUASIMODO_LTR LTR Gypsy -604 54 8 8 643 1255 330 3 3 chrUextra 7675533 7676105 -21328551 + HMSBEAGLE_I LTR Gypsy 1509 2080 -4449 8 643 524 188 16 0 chrUextra 7676332 7676460 -21328196 - ARS406_DM Unknown Unknown -223 130 1 8 643 2864 179 67 14 chrUextra 7676365 7677142 -21327514 + SAR_DM Satellite Satellite 191 1008 -464 8 643 2003 154 128 0 chrUextra 7677242 7677770 -21326886 - DMRT1B LINE R1 -620 4563 3968 8 643 1990 45 0 11 chrUextra 7677773 7678045 -21326611 + TRANSIB2 DNA Transib 10 278 -2566 8 643 6596 15 4 0 chrUextra 7678152 7678959 -21325697 + ROO_I LTR Pao 2415 3224 -5032 8 643 6688 20 0 2 chrUextra 7679972 7680782 -21323874 - R1_DM LINE R1 -2890 2466 1659 8 643 1620 0 0 0 chrUextra 7681300 7681480 -21323176 + (ATAAG)n Simple_repeat Simple_repeat 1 180 0 8 643 1228 41 0 12 chrUextra 7681500 7681673 -21322983 + (ATAAG)n Simple_repeat Simple_repeat 1 171 0 8 643 612 0 52 0 chrUextra 7681792 7681869 -21322787 + DOC3_DM LINE Jockey 4416 4496 -244 8 643 707 37 37 0 chrUextra 7681866 7681973 -21322683 + DOC3_DM LINE Jockey 4630 4740 0 8 643 4633 47 12 0 chrUextra 7682009 7682602 -21322054 + BS3_DM LINE Jockey 341 940 -850 8 643 936 35 0 0 chrUextra 7682702 7682816 -21321840 + DMCR1A LINE CR1 4357 4470 0 8 643 516 225 62 85 chrUextra 7682823 7683110 -21321546 - Gypsy8_LTR LTR Gypsy -5 299 1 8 643 6938 1 2 2 chrUextra 7683612 7684422 -21320234 + LSU-rRNA_Dme rRNA rRNA 850 1659 -2241 8 643 3516 176 7 11 chrUextra 7684522 7685332 -21319324 + SAR_DM Satellite Satellite 212 1018 -454 8 643 6361 24 25 11 chrUextra 7685434 7686242 -21318414 - FW_DM LINE Jockey -3120 1572 754 8 643 5540 16 14 9 chrUextra 7686342 7687030 -21317626 + R1_DM LINE R1 4374 5065 -291 8 643 895 45 0 0 chrUextra 7687031 7687142 -21317514 + R1_DM LINE R1 5246 5356 0 8 643 41 66 0 0 chrUextra 7687252 7687328 -21317328 + AT_rich Low_complexity Low_complexity 1 76 0 8 643 22 35 0 0 chrUextra 7687415 7687444 -21317212 + AT_rich Low_complexity Low_complexity 1 29 0 8 643 1252 261 2 7 chrUextra 7687600 7688062 -21316594 - Gypsy11_I LTR Gypsy -137 3387 2928 8 643 3032 198 20 22 chrUextra 7688163 7688971 -21315685 + SAR_DM Satellite Satellite 425 1230 -242 8 643 6409 32 15 1 chrUextra 7689072 7689882 -21314774 + DMCR1A LINE CR1 3187 4007 -463 8 643 261 83 0 0 chrUextra 7689982 7690018 -21314638 + DM297_I LTR Gypsy 753 788 -5379 8 643 470 73 60 12 chrUextra 7690006 7690089 -21314567 - DM297_I LTR Gypsy -6080 87 1 8 643 526 99 369 0 chrUextra 7690089 7690255 -21314401 - DM297_LTR LTR Gypsy 0 414 187 8 643 313 233 23 11 chrUextra 7690280 7690367 -21314289 - R1-2_DM LINE R1 -12 5344 5257 8 643 299 167 0 0 chrUextra 7690473 7690535 -21314121 - R1-2_DM LINE R1 0 3216 3167 8 643 1673 68 161 0 chrUextra 7690531 7690792 -21313864 - R1-2_DM LINE R1 -551 2665 2363 8 643 994 311 2 7 chrUextra 7690892 7691326 -21313330 - MDG3_I LTR Gypsy -862 4124 3693 8 643 635 295 10 29 chrUextra 7691341 7691655 -21313001 - MDG3_I LTR Gypsy -1347 3639 3332 8 643 1409 11 0 6 chrUextra 7691802 7691977 -21312679 - FW_DM LINE Jockey -4495 197 24 8 643 1517 26 3 16 chrUextra 7691982 7692612 -21312044 + (TATAA)n Simple_repeat Simple_repeat 1 621 0 8 643 2458 3 0 0 chrUextra 7692712 7693018 -21311638 + DOC LINE Jockey 4420 4725 0 8 643 1977 25 0 8 chrUextra 7693023 7693270 -21311386 + CIRCE LINE Composite 3480 3724 -2632 8 643 1777 40 0 35 chrUextra 7693266 7693522 -21311134 + CIRCE LINE Composite 4391 4637 -1719 8 643 3596 22 4 24 chrUextra 7693622 7694086 -21310570 - CIRCE LINE Composite -4014 2342 1888 8 643 609 293 42 57 chrUextra 7693751 7694153 -21310503 - Gypsy12_I LTR Gypsy -1316 4230 3835 8 643 2203 30 4 0 chrUextra 7694162 7694432 -21310224 - CIRCE LINE Composite -4474 1882 1612 8 643 2198 284 5 14 chrUextra 7694584 7695342 -21309314 + ROVER-I_DM LTR Gypsy 904 1654 -4930 8 643 6889 11 0 0 chrUextra 7695442 7696251 -21308405 + DOC2_DM LINE Jockey 3481 4289 -504 8 643 3571 0 2 2 chrUextra 7696352 7696767 -21307889 - DOC LINE Jockey -4306 419 5 8 643 6797 9 7 1 chrUextra 7697262 7698072 -21306584 + DOC2_DM LINE Jockey 2960 3774 -1019 8 643 3330 177 15 21 chrUextra 7698172 7698981 -21305675 + SAR_DM Satellite Satellite 369 1172 -300 8 643 1437 12 0 0 chrUextra 7699082 7699249 -21305407 + (TTATA)n Simple_repeat Simple_repeat 2 168 0 8 643 3036 8 58 3 chrUextra 7699277 7699658 -21304998 - STALKER4_LTR LTR Gypsy 0 402 1 8 643 1796 4 0 4 chrUextra 7699658 7699892 -21304764 - STALKER4_I LTR Gypsy 0 6530 6298 8 643 3226 176 32 21 chrUextra 7699992 7700802 -21303854 + SAR_DM Satellite Satellite 389 1207 -265 8 643 4822 17 0 0 chrUextra 7700902 7701484 -21303172 + FW_DM LINE Jockey 1324 1905 -2787 8 643 1948 13 0 0 chrUextra 7701482 7701712 -21302944 + FW_DM LINE Jockey 2282 2511 -2181 8 643 2040 35 4 0 chrUextra 7701815 7702072 -21302584 + CIRCE LINE Composite 5072 5329 -1027 8 643 21 0 0 0 chrUextra 7702074 7702095 -21302561 + AT_rich Low_complexity Low_complexity 1 21 0 8 643 2308 39 23 0 chrUextra 7702095 7702404 -21302252 - IDEFIX_LTR LTR Gypsy -278 316 1 8 643 845 98 43 11 chrUextra 7702404 7702622 -21302034 + Invader2_I LTR Gypsy 3419 3709 -883 8 643 4680 16 0 0 chrUextra 7702722 7703284 -21301372 - FW_DM LINE Jockey -3673 1019 458 8 643 1146 28 0 0 chrUextra 7703279 7703421 -21301235 - R1_DM LINE R1 -2242 3114 2973 8 643 844 54 0 0 chrUextra 7703420 7703532 -21301124 + FW_DM LINE Jockey 353 464 -4228 8 643 2748 0 0 0 chrUextra 7703632 7703957 -21300699 + BARI_DM DNA Tc1 1403 1727 -1 8 643 4182 0 2 0 chrUextra 7703957 7704442 -21300214 + BARI_DM DNA Tc1 4 489 -1239 8 643 519 90 0 196 chrUextra 7704866 7705004 -21299652 + DNAREP1_DM LINE Penelope 475 585 -9 8 643 21 0 0 0 chrUextra 7705090 7705111 -21299545 + AT_rich Low_complexity Low_complexity 1 21 0 8 643 294 191 23 0 chrUextra 7705206 7705285 -21299371 - PROTOP_A DNA P -981 124 43 8 643 1923 104 61 58 chrUextra 7705452 7705830 -21298826 - Gypsy6_LTR LTR Gypsy -28 379 1 8 643 1919 185 5 5 chrUextra 7705830 7706249 -21298407 - Gypsy3_I LTR Gypsy 0 6177 5892 8 643 6788 16 0 1 chrUextra 7706362 7707172 -21297484 - HETA LINE telomeric -3584 2497 1689 8 643 3614 169 94 11 chrUextra 7707272 7708071 -21296585 + Gypsy5_I LTR Gypsy 278 1142 -5367 8 643 4388 11 6 0 chrUextra 7708182 7708717 -21295939 + DM176_I LTR Gypsy 3127 3664 -2756 8 643 2229 8 0 0 chrUextra 7708726 7708992 -21295664 + DM176_I LTR Gypsy 3817 4082 -2338 8 643 2988 208 7 16 chrUextra 7709092 7709898 -21294758 + SAR_DM Satellite Satellite 419 1217 -255 8 643 787 0 104 0 chrUextra 7710022 7710527 -21294129 + (GTCTG)n Simple_repeat Simple_repeat 1 557 0 8 643 388 139 76 0 chrUextra 7710534 7710613 -21294043 - DNAREP1_DM LINE Penelope -509 85 1 8 643 6832 11 0 0 chrUextra 7710912 7711722 -21292934 + HETA LINE telomeric 2228 3037 -3044 8 643 1085 275 96 10 chrUextra 7712733 7713541 -21291115 - TV1I LTR Gypsy -2280 3683 2807 8 643 3522 179 9 10 chrUextra 7713643 7714452 -21290204 + SAR_DM Satellite Satellite 195 1002 -470 8 643 332 0 0 0 chrUextra 7714552 7714592 -21290064 + ARS406_DM Unknown Unknown 143 182 -171 8 643 3664 227 14 34 chrUextra 7714590 7716268 -21288388 - SAR_DM Satellite Satellite -478 1644 1 8 643 28 48 0 0 chrUextra 7716628 7716670 -21287986 + AT_rich Low_complexity Low_complexity 1 42 0 8 643 32 0 0 0 chrUextra 7716998 7717030 -21287626 + AT_rich Low_complexity Low_complexity 1 32 0 8 643 3337 180 8 13 chrUextra 7717282 7718065 -21286591 + SAR_DM Satellite Satellite 298 1076 -396 8 643 1929 136 155 43 chrUextra 7718192 7718638 -21286018 + TART LINE telomeric 9781 10276 -4201 8 643 779 29 29 0 chrUextra 7718649 7718754 -21285902 + TART LINE telomeric 10556 10663 -3814 8 643 448 30 88 15 chrUextra 7718752 7718820 -21285836 + TAHRE LINE telomeric 10380 10452 -11 8 643 878 129 12 41 chrUextra 7718820 7718990 -21285666 + TART LINE telomeric 6985 7149 -7328 8 643 1243 49 0 0 chrUextra 7719102 7719265 -21285391 + G2_DM LINE Jockey 2471 2633 -469 8 643 5068 42 3 0 chrUextra 7719264 7719911 -21284745 - G2_DM LINE Jockey -725 2377 1729 8 643 1727 58 0 0 chrUextra 7720426 7720652 -21284004 + PROTOP DNA P 74 299 -4181 8 643 981 50 144 0 chrUextra 7720639 7720820 -21283836 + PROTOP DNA P 519 725 -3755 8 643 6309 20 0 30 chrUextra 7720920 7721729 -21282927 - QUASIMODO_I LTR Gypsy -5234 826 42 8 643 4140 0 0 0 chrUextra 7721829 7722303 -21282353 - FW_DM LINE Jockey -905 3787 3314 8 643 1404 108 0 9 chrUextra 7722334 7722549 -21282107 - BS2 LINE Jockey -4259 462 250 8 643 2497 86 43 11 chrUextra 7722738 7723547 -21281109 - DMSAT6 Satellite Satellite -95 835 1 8 643 1555 57 14 0 chrUextra 7723647 7723859 -21280797 - IDEFIX_I LTR Gypsy -5413 215 1 8 643 25 0 0 0 chrUextra 7724126 7724151 -21280505 + AT_rich Low_complexity Low_complexity 1 25 0 8 643 612 71 70 9 chrUextra 7724342 7724456 -21280200 - IDEFIX_LTR LTR Gypsy 0 594 474 8 643 1094 138 0 6 chrUextra 7724556 7724731 -21279925 + Gypsy12_I LTR Gypsy 1648 1821 -3725 8 643 4041 91 56 13 chrUextra 7724728 7725340 -21279316 + Gypsy12_I LTR Gypsy 4465 5102 -444 8 643 885 158 0 0 chrUextra 7725465 7725623 -21279033 + (TATG)n Simple_repeat Simple_repeat 2 159 0 8 643 1137 128 0 0 chrUextra 7725622 7725802 -21278854 + (TA)n Simple_repeat Simple_repeat 1 180 0 8 643 449 161 0 11 chrUextra 7725808 7725896 -21278760 + (TATG)n Simple_repeat Simple_repeat 2 88 0 8 643 1116 133 0 0 chrUextra 7725895 7726075 -21278581 + (TA)n Simple_repeat Simple_repeat 1 180 0 8 643 1040 123 0 22 chrUextra 7726089 7726272 -21278384 + (TATG)n Simple_repeat Simple_repeat 2 180 0 8 643 6326 1 4 5 chrUextra 7726374 7727127 -21277529 + LSU-rRNA_Dme rRNA rRNA 1037 1788 -2112 8 643 5543 47 11 1 chrUextra 7727284 7728092 -21276564 + Gypsy6_I LTR Gypsy 2608 3944 -3068 8 643 1158 122 0 0 chrUextra 7728229 7728593 -21276063 + (TA)n Simple_repeat Simple_repeat 1 364 0 8 643 1146 122 0 0 chrUextra 7728599 7728779 -21275877 + (TATG)n Simple_repeat Simple_repeat 1 180 0 8 643 1103 122 0 11 chrUextra 7728804 7728986 -21275670 + (TA)n Simple_repeat Simple_repeat 1 180 0 8 643 3676 268 20 36 chrUextra 7729104 7730810 -21273846 + SAR_DM Satellite Satellite 1 1678 -208 8 643 494 17 0 0 chrUextra 7730760 7730819 -21273837 - ARS406_DM Unknown Unknown -164 189 131 8 643 1875 242 118 9 chrUextra 7731087 7731671 -21272985 + Invader3_I LTR Gypsy 198 845 -4043 8 643 229 94 0 0 chrUextra 7731675 7731707 -21272949 + Invader3_I LTR Gypsy 1440 1471 -3417 8 643 2448 88 19 29 chrUextra 7731828 7732637 -21272019 - DMSAT6 Satellite Satellite -4 800 1 8 80 6452 27 36 0 chrUextra 7732737 7733546 -21271110 - R1_DM LINE R1 -173 5183 4346 8 644 254 192 41 0 chrUextra 7734276 7734349 -21270307 + (TATAA)n Simple_repeat Simple_repeat 5 80 0 8 644 1669 86 58 168 chrUextra 7734555 7734931 -21269725 - Gypsy12_I LTR Gypsy -3902 1644 1310 8 644 2948 11 3 6 chrUextra 7734929 7735285 -21269371 - DM412B_LTR LTR Gypsy -89 482 128 8 644 578 25 25 12 chrUextra 7735283 7735364 -21269292 - T412LTR LTR LTR -320 161 80 8 644 6076 45 31 6 chrUextra 7735464 7736273 -21268383 - IDEFIX_I LTR Gypsy -3420 2208 1380 8 644 787 170 6 19 chrUextra 7736444 7736600 -21268056 + HETRP_DM Satellite Satellite 1516 1669 -203 8 644 276 185 250 42 chrUextra 7736758 7736854 -21267802 + HETRP_DM Satellite Satellite 1519 1634 -238 8 644 787 170 6 19 chrUextra 7736902 7737058 -21267598 + HETRP_DM Satellite Satellite 1516 1669 -203 8 644 5880 29 4 1 chrUextra 7737283 7738091 -21266565 - TART LINE telomeric -5437 9040 8328 8 644 4743 0 0 2 chrUextra 7738191 7738735 -21265921 + R2_DM LINE R2 3065 3607 0 8 644 659 26 0 0 chrUextra 7738734 7738812 -21265844 + LSU-rRNA_Dme rRNA rRNA 2578 2655 -1245 8 644 886 10 0 0 chrUextra 7738812 7738914 -21265742 + R1_DM LINE R1 5255 5356 0 8 644 762 11 0 0 chrUextra 7738912 7739000 -21265656 + LSU-rRNA_Dme rRNA rRNA 2640 2727 -1173 8 644 3124 179 27 22 chrUextra 7739100 7739909 -21264747 + SAR_DM Satellite Satellite 1 813 -411 8 644 5129 19 0 2 chrUextra 7740009 7740629 -21264027 + R1_DM LINE R1 1675 2293 -3063 8 644 1689 30 0 0 chrUextra 7740615 7740818 -21263838 + R1_DM LINE R1 3134 3336 -2020 8 644 5152 115 5 2 chrUextra 7740918 7741722 -21262934 - TART LINE telomeric -3689 2392 1587 8 644 3564 175 9 9 chrUextra 7741830 7742632 -21262024 - SAR_DM Satellite Satellite -425 1047 246 8 644 2222 127 14 27 chrUextra 7742736 7743545 -21261111 + DMSAT6 Satellite Satellite 1 798 -51 8 644 2905 184 26 29 chrUextra 7743645 7744427 -21260229 - SAR_DM Satellite Satellite -259 1213 435 8 644 2151 113 0 12 chrUextra 7744568 7744891 -21259765 + Gypsy12_I LTR Gypsy 1503 1821 -3725 8 644 3097 88 55 19 chrUextra 7744888 7745363 -21259293 + Gypsy12_I LTR Gypsy 4465 4956 -590 8 644 3292 0 0 0 chrUextra 7745463 7745838 -21258818 + LSU-rRNA_Dme rRNA rRNA 3526 3900 0 8 644 29 28 0 0 chrUextra 7745910 7745946 -21258710 + AT_rich Low_complexity Low_complexity 1 36 0 8 644 246 150 0 0 chrUextra 7745951 7745991 -21258665 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 644 246 150 0 0 chrUextra 7746043 7746083 -21258573 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 644 246 150 0 0 chrUextra 7746135 7746175 -21258481 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 644 5863 3 68 0 chrUextra 7746372 7747095 -21257561 + LSU-rRNA_Dme rRNA rRNA 1861 2632 -1268 8 644 708 0 12 0 chrUextra 7747095 7747181 -21257475 + R1_DM LINE R1 1 87 -5269 8 644 431 198 0 18 chrUextra 7748190 7748303 -21256353 + XDMR_DM Unknown Unknown 250 360 0 8 644 3210 183 9 18 chrUextra 7748217 7748997 -21255659 - SAR_DM Satellite Satellite -354 1118 346 8 644 3731 48 8 12 chrUextra 7749126 7749635 -21255021 - BATUMI_I LTR Pao -4389 3574 3068 8 644 602 96 11 11 chrUextra 7749634 7749754 -21254902 - BATUMI_I LTR Pao -5170 2744 2623 8 644 1145 15 0 0 chrUextra 7749772 7749908 -21254748 - BATUMI_I LTR Pao -5476 2487 2352 8 644 2925 70 12 14 chrUextra 7750009 7750432 -21254224 - DMCR1A LINE CR1 -1226 3244 2823 8 644 1742 52 264 0 chrUextra 7750432 7750817 -21253839 - DMCR1A LINE CR1 -1870 2600 2114 8 644 2930 187 31 28 chrUextra 7750917 7751724 -21252932 + SAR_DM Satellite Satellite 1 809 -219 8 644 6611 6 11 0 chrUextra 7751826 7752635 -21252021 + STALKER4_I LTR Gypsy 2693 3510 -3020 8 644 1123 276 29 33 chrUextra 7752740 7753530 -21251126 + STALKER4_I LTR Gypsy 2694 3480 -3050 8 644 2961 181 66 11 chrUextra 7753648 7754453 -21250203 - SAR_DM Satellite Satellite -715 849 1 8 644 5257 16 2 0 chrUextra 7754724 7755362 -21249294 - PROTOP_A DNA P 0 1105 467 8 644 515 54 1 0 chrUextra 7755462 7755530 -21249126 - FW2_DM LINE Jockey -831 3130 3070 8 644 1565 49 13 13 chrUextra 7755535 7755762 -21248894 - FW2_DM LINE Jockey -1756 2205 1979 8 644 4268 29 0 2 chrUextra 7755749 7756271 -21248385 - FW2_DM LINE Jockey -2115 1846 1326 8 644 26 0 0 0 chrUextra 7757279 7757305 -21247351 + AT_rich Low_complexity Low_complexity 1 26 0 8 644 551 0 131 6 chrUextra 7757305 7757626 -21247030 + (TA)n Simple_repeat Simple_repeat 1 361 0 8 644 2316 8 0 0 chrUextra 7757631 7757897 -21246759 - DMLTR5 LTR Gypsy 0 266 1 8 644 1609 0 0 0 chrUextra 7757897 7758087 -21246569 - HMSBEAGLE_I LTR Gypsy 0 6529 6340 8 644 6009 19 5 34 chrUextra 7758187 7758989 -21245667 + STALKER4_I LTR Gypsy 3178 3956 -2574 8 644 5054 19 13 5 chrUextra 7759095 7759722 -21244934 - Transib5 DNA Transib -1408 1593 962 8 644 1263 72 16 6 chrUextra 7759721 7759903 -21244753 + DMRT1A LINE R1 4837 5020 -163 8 644 3432 180 10 10 chrUextra 7760003 7760806 -21243850 - SAR_DM Satellite Satellite -443 1029 227 8 644 7058 0 1 1 chrUextra 7760911 7761719 -21242937 + GTWIN_I LTR Gypsy 4485 5292 -1129 8 644 3038 189 27 21 chrUextra 7761820 7762627 -21242029 - SAR_DM Satellite Satellite -242 1230 419 8 644 2568 94 31 4 chrUextra 7762727 7763535 -21241121 - DMSAT6 Satellite Satellite -105 829 1 8 644 234 50 200 0 chrUextra 7764248 7764288 -21240368 + PROTOP_B DNA P 1 48 -1105 8 644 1118 66 7 0 chrUextra 7764291 7764443 -21240213 + Gypsy12_I LTR Gypsy 2449 2601 -2945 8 644 3894 30 0 4 chrUextra 7764543 7765046 -21239610 + CIRCE LINE Composite 4480 4980 -1376 8 644 1118 73 0 0 chrUextra 7765200 7765351 -21239305 - R1_DM LINE R1 -4037 1319 1169 8 644 2372 99 14 38 chrUextra 7765451 7766247 -21238409 + DMSAT6 Satellite Satellite 1 776 -31 8 644 2074 30 57 0 chrUextra 7766359 7766623 -21238033 - PROTOP_A DNA P -807 298 20 8 644 6973 2 0 1 chrUextra 7767267 7768075 -21236581 - ROO_I LTR Pao -575 7681 6875 8 644 7036 2 0 1 chrUextra 7768175 7768983 -21235673 - LSU-rRNA_Dme rRNA rRNA -527 3373 2567 8 644 3193 188 11 12 chrUextra 7769083 7769891 -21234765 + SAR_DM Satellite Satellite 185 991 -481 8 644 2938 177 10 4 chrUextra 7769991 7770796 -21233860 + SAR_DM Satellite Satellite 1 809 -677 8 644 4160 192 0 0 chrUextra 7771807 7772615 -21232041 + ROVER-I_DM LTR Gypsy 2665 3472 -3112 8 644 2295 7 0 0 chrUextra 7772715 7772987 -21231669 - FW_DM LINE Jockey -3937 755 484 8 644 2595 202 2 4 chrUextra 7772986 7773523 -21231133 - Gypsy6_I LTR Gypsy -2139 4873 4338 8 644 4401 6 132 6 chrUextra 7773623 7774273 -21230383 + MDG1_I LTR Gypsy 5878 6799 -98 8 644 423 100 0 0 chrUextra 7774277 7774347 -21230309 + (TAA)n Simple_repeat Simple_repeat 3 72 0 8 644 690 0 12 0 chrUextra 7774347 7774431 -21230225 + MDG1_LTR LTR Gypsy 87 171 -271 8 644 291 28 0 0 chrUextra 7774786 7774822 -21229834 + (TTCTC)n Simple_repeat Simple_repeat 2 37 0 8 644 369 0 0 0 chrUextra 7774829 7774870 -21229786 + (GAGAA)n Simple_repeat Simple_repeat 4 44 0 8 644 3103 101 17 13 chrUextra 7775439 7775991 -21228665 + MDG1_I LTR Gypsy 5768 6695 -202 8 644 288 0 0 0 chrUextra 7775991 7776023 -21228633 + (TA)n Simple_repeat Simple_repeat 2 33 0 8 644 608 265 83 61 chrUextra 7776023 7776129 -21228527 + MDG1_I LTR Gypsy 6696 6798 -99 8 644 909 44 0 0 chrUextra 7776133 7776247 -21228409 + (TAA)n Simple_repeat Simple_repeat 3 116 0 8 644 3150 176 21 37 chrUextra 7777255 7778062 -21226594 - SAR_DM Satellite Satellite -417 1055 262 8 644 2346 220 26 51 chrUextra 7778165 7778970 -21225686 - HETA LINE telomeric -1970 4111 3327 8 644 6753 5 1 0 chrUextra 7779979 7780787 -21223869 - DMRT1A LINE R1 -3807 1376 568 8 644 6476 30 1 1 chrUextra 7780887 7781695 -21222961 + R1_DM LINE R1 2039 2846 -2510 8 644 4733 59 26 7 chrUextra 7781795 7782574 -21222082 + TART LINE telomeric 10051 10663 -3814 8 644 3459 21 34 5 chrUextra 7783073 7783511 -21221145 + PROTOP_B DNA P 1 451 -702 8 644 24 32 0 0 chrUextra 7784044 7784075 -21220581 + AT_rich Low_complexity Low_complexity 1 31 0 8 644 23 0 0 0 chrUextra 7784154 7784177 -21220479 + AT_rich Low_complexity Low_complexity 1 23 0 8 644 593 79 11 0 chrUextra 7784177 7784266 -21220390 - BS3_DM LINE Jockey -1 1789 1700 8 644 607 11 0 132 chrUextra 7785060 7785265 -21219391 + (TAAAAA)n Simple_repeat Simple_repeat 2 179 0 8 644 220 204 68 0 chrUextra 7785224 7785327 -21219329 + A-rich Low_complexity Low_complexity 5 114 0 8 644 571 42 0 0 chrUextra 7785427 7785499 -21219157 + ARS406_DM Unknown Unknown 118 189 -164 8 644 3108 186 15 21 chrUextra 7785436 7786235 -21218421 - SAR_DM Satellite Satellite -242 1230 437 8 644 180 0 0 0 chrUextra 7786335 7786355 -21218301 + (TTG)n Simple_repeat Simple_repeat 2 21 0 8 644 2119 102 52 134 chrUextra 7786526 7787069 -21217587 + PROTOP_B DNA P 618 1115 -38 8 644 6650 20 2 0 chrUextra 7787243 7788051 -21216605 + IDEFIX_I LTR Gypsy 1552 2361 -3267 8 644 1249 25 0 0 chrUextra 7788454 7788612 -21216044 + MDG1_LTR LTR Gypsy 284 441 -1 8 644 531 0 0 0 chrUextra 7788612 7788671 -21215985 + (CAAGA)n Simple_repeat Simple_repeat 5 63 0 8 644 23 68 0 0 chrUextra 7789774 7789818 -21214838 + AT_rich Low_complexity Low_complexity 1 44 0 8 644 3177 193 14 23 chrUextra 7789977 7790775 -21213881 - SAR_DM Satellite Satellite -535 790 1 8 644 6154 28 1 0 chrUextra 7790930 7791683 -21212973 - R1_DM LINE R1 0 5356 4603 8 644 1321 62 0 10 chrUextra 7791784 7791981 -21212675 - CIRCE LINE Composite -1504 4852 4658 8 644 3927 81 5 30 chrUextra 7791981 7792591 -21212065 - CIRCE LINE Composite -2431 3925 3331 8 644 2066 201 31 8 chrUextra 7792691 7792891 -21211765 - SAR_DM Satellite Satellite -1030 827 607 8 644 387 94 16 0 chrUextra 7792891 7792955 -21211701 + ARS406_DM Unknown Unknown 122 186 -167 8 644 2066 201 31 8 chrUextra 7792955 7793499 -21211157 - SAR_DM Satellite Satellite -1030 606 1 8 644 1540 0 0 0 chrUextra 7793599 7793774 -21210882 + LSU-rRNA_Dme rRNA rRNA 2404 2578 -1322 8 644 5493 2 0 0 chrUextra 7793773 7794407 -21210249 + R2_DM LINE R2 605 1238 -2369 8 644 5792 7 68 0 chrUextra 7794507 7795315 -21209341 + Gypsy4_I LTR Gypsy 2818 3680 -2608 8 644 2717 201 68 35 chrUextra 7795415 7796223 -21208433 + TAHRE LINE telomeric 127 961 -9502 8 644 706 11 0 11 chrUextra 7796323 7796411 -21208245 - MICROPIA_I LTR Gypsy -4389 87 1 8 644 3907 6 0 61 chrUextra 7796411 7796918 -21207738 - MICROPIA_LTR LTR Gypsy 0 476 1 8 644 1844 5 5 0 chrUextra 7796918 7797131 -21207525 - STALKER4_LTR LTR Gypsy -146 256 43 8 644 6937 5 0 0 chrUextra 7797231 7798039 -21206617 + Gypsy4_I LTR Gypsy 308 1115 -5173 8 644 6149 28 76 0 chrUextra 7799063 7799855 -21204801 - R1_DM LINE R1 0 5356 4505 8 644 2693 81 123 1 chrUextra 7799959 7800763 -21203893 - Gypsy12_I LTR Gypsy 0 5546 4610 8 644 1965 17 0 0 chrUextra 7800863 7801097 -21203559 - DIVER2_I LTR Pao -171 3976 3743 8 644 1451 38 0 103 chrUextra 7801095 7801329 -21203327 - DIVER2_I LTR Pao -2572 1575 1366 8 644 6050 29 53 4 chrUextra 7801773 7802577 -21202079 - CIRCE LINE Composite -2634 3722 2879 8 644 297 70 0 0 chrUextra 7802679 7802722 -21201934 - CIRCE LINE Composite -3178 3178 3136 8 644 5533 48 3 28 chrUextra 7802725 7803487 -21201169 - CIRCE LINE Composite -3487 2869 2127 8 644 1741 30 94 4 chrUextra 7803587 7803620 -21201036 - Stalker3_LTR LTR Gypsy -116 256 202 8 644 198 0 0 0 chrUextra 7803620 7803642 -21201014 + (CTTAT)n Simple_repeat Simple_repeat 3 24 0 8 644 1741 30 94 4 chrUextra 7803642 7803843 -21200813 - Stalker3_LTR LTR Gypsy -171 201 1 8 644 337 39 0 24 chrUextra 7803843 7803912 -21200744 - STALKER4_I LTR Gypsy 0 6530 6491 8 644 244 215 0 0 chrUextra 7803913 7803978 -21200678 + T-rich Low_complexity Low_complexity 1 65 0 8 644 284 48 24 0 chrUextra 7803989 7804031 -21200625 + (TTTTA)n Simple_repeat Simple_repeat 4 46 0 8 644 22 35 0 0 chrUextra 7804130 7804159 -21200497 + AT_rich Low_complexity Low_complexity 1 29 0 8 644 1835 0 0 0 chrUextra 7804495 7804703 -21199953 - BEL_I LTR Pao -5196 208 1 8 644 3166 0 0 0 chrUextra 7804703 7805064 -21199592 - BEL_LTR LTR Pao 0 361 1 8 644 1970 4 0 0 chrUextra 7805064 7805303 -21199353 - TRANSPAC_I LTR Gypsy -345 4245 4007 8 644 6689 15 14 0 chrUextra 7805403 7806210 -21198446 + FW_DM LINE Jockey 3776 4593 -99 8 644 3101 193 18 22 chrUextra 7806310 7807109 -21197547 + SAR_DM Satellite Satellite 378 1172 -300 8 644 1067 15 0 62 chrUextra 7807371 7807515 -21197141 - 5S_DM RNA RNA 0 135 1 8 644 1167 7 0 0 chrUextra 7807746 7807881 -21196775 - 5S_DM RNA RNA 0 135 1 8 644 2396 129 20 24 chrUextra 7808124 7808931 -21195725 + DMSAT6 Satellite Satellite 1 803 -233 8 644 7097 0 0 0 chrUextra 7809031 7809838 -21194818 - Gypsy12_I LTR Gypsy -2276 3270 2464 8 644 2833 199 120 4 chrUextra 7810845 7811652 -21193004 + Gypsy5_I LTR Gypsy 1261 2161 -4348 8 644 6945 0 2 0 chrUextra 7811752 7812559 -21192097 + G_DM LINE Jockey 805 1613 -2733 8 644 3149 71 2 5 chrUextra 7812659 7813100 -21191556 + R1_DM LINE R1 172 611 -4745 8 644 2791 52 3 3 chrUextra 7813100 7813466 -21191190 + R1_DM LINE R1 1103 1468 -3888 8 644 3747 0 0 0 chrUextra 7814473 7814928 -21189728 - ROVER-I_DM LTR Gypsy -6129 455 1 8 644 2975 3 3 0 chrUextra 7814928 7815280 -21189376 - ROVER-LTR_DM LTR Gypsy 0 367 15 8 644 695 57 0 0 chrUextra 7815380 7815485 -21189171 + QUASIMODO_I LTR Gypsy 5623 5727 -333 8 644 2558 102 13 35 chrUextra 7815595 7816048 -21188608 + QUASIMODO_LTR LTR Gypsy 79 658 0 8 644 6971 2 0 0 chrUextra 7816287 7817094 -21187562 - DM1731_I LTR Copia -1513 2463 1657 8 644 2387 192 80 51 chrUextra 7817194 7818000 -21186656 - TAHRE LINE telomeric -5985 8492 7171 8 644 330 0 0 0 chrUextra 7818101 7818141 -21186515 - MAX_I LTR Pao -7874 40 1 8 644 2729 12 0 0 chrUextra 7818141 7818462 -21186194 - MAX_LTR LTR Pao 0 321 1 8 644 1992 152 34 11 chrUextra 7818462 7818908 -21185748 - SAR_DM Satellite Satellite -676 796 341 8 644 3296 35 12 4 chrUextra 7819008 7819815 -21184841 + Transib5 DNA Transib 1279 2132 -869 8 644 6338 32 1 0 chrUextra 7819915 7820722 -21183934 - MDG1_I LTR Gypsy -829 5767 4960 8 644 842 28 0 0 chrUextra 7821731 7821838 -21182818 + G_DM LINE Jockey 4225 4331 -15 8 644 5104 7 2 0 chrUextra 7821945 7822536 -21182120 - LSU-rRNA_Dme rRNA rRNA -7 3893 3302 8 644 6057 0 1 0 chrUextra 7822636 7823326 -21181330 + LSU-rRNA_Dme rRNA rRNA 3210 3900 0 8 644 29 28 0 0 chrUextra 7823398 7823434 -21181222 + AT_rich Low_complexity Low_complexity 1 36 0 8 644 655 142 8 0 chrUextra 7823543 7823663 -21180993 + SAR_DM Satellite Satellite 701 821 -651 8 644 4441 0 0 0 chrUextra 7823663 7824169 -21180487 + TABOR_LTR LTR Gypsy 1 506 0 8 644 1451 6 11 0 chrUextra 7824169 7824350 -21180306 + TABOR_I LTR Gypsy 1 183 -6153 8 644 3162 229 39 19 chrUextra 7824454 7824485 -21180171 + SAR_DM Satellite Satellite 1 33 -2279 8 644 657 53 53 0 chrUextra 7824485 7824580 -21180076 - ARS406_DM Unknown Unknown -164 189 90 8 644 3162 229 39 19 chrUextra 7824580 7826163 -21178493 + SAR_DM Satellite Satellite 34 1743 -569 8 644 951 32 8 0 chrUextra 7826264 7826388 -21178268 + G3_DM LINE Jockey 4459 4583 -22 8 644 23 0 0 0 chrUextra 7826420 7826443 -21178213 + AT_rich Low_complexity Low_complexity 1 23 0 8 644 216 86 0 0 chrUextra 7826459 7826494 -21178162 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 8 644 3955 2 74 0 chrUextra 7827171 7827978 -21176678 - G2_DM LINE Jockey -1943 1159 293 8 644 3072 187 19 23 chrUextra 7828078 7828873 -21175783 + SAR_DM Satellite Satellite 390 1181 -291 8 644 4101 22 10 2 chrUextra 7828985 7829489 -21175167 + R1_DM LINE R1 4849 5356 0 8 644 1906 70 7 0 chrUextra 7829522 7829792 -21174864 + R1_DM LINE R1 1 272 -5084 8 644 6380 17 24 0 chrUextra 7829892 7830699 -21173957 - STALKER4_I LTR Gypsy -2612 3918 3093 8 644 4093 15 11 0 chrUextra 7830799 7831343 -21173313 + STALKER4_I LTR Gypsy 5981 6530 0 8 644 799 61 0 0 chrUextra 7831343 7831458 -21173198 + STALKER4_LTR LTR Gypsy 1 115 -287 8 644 1297 6 0 6 chrUextra 7831440 7831604 -21173052 + BARI_DM DNA Tc1 1408 1570 -158 8 644 1172 125 41 82 chrUextra 7831706 7831976 -21172680 + TART LINE telomeric 3104 3362 -11115 8 644 1224 124 0 28 chrUextra 7831971 7832185 -21172471 + TART LINE telomeric 3683 3890 -10587 8 644 2813 9 0 0 chrUextra 7832185 7832513 -21172143 - PROTOP_A DNA P 0 1105 778 8 644 360 107 0 0 chrUextra 7832892 7832948 -21171708 + DNAREP1_DM LINE Penelope 386 441 -153 8 644 3702 174 23 15 chrUextra 7833526 7834324 -21170332 - SAR_DM Satellite Satellite -300 1172 369 8 644 1154 21 107 0 chrUextra 7834631 7834771 -21169885 + PROTOP_B DNA P 1 155 -998 8 644 3482 77 7 19 chrUextra 7834769 7835234 -21169422 + Gypsy12_I LTR Gypsy 4657 5115 -431 8 644 1068 8 0 0 chrUextra 7835334 7835451 -21169205 - NTS_DM Other Other -123 117 1 8 644 1866 25 17 17 chrUextra 7835451 7835691 -21168965 - NTS_DM Other Other 0 240 1 8 644 1558 15 20 20 chrUextra 7835691 7835894 -21168762 - NTS_DM Other Other 0 240 38 8 644 936 9 0 27 chrUextra 7835894 7836006 -21168650 - NTS_DM Other Other -107 133 25 8 644 565 36 0 12 chrUextra 7836058 7836141 -21168515 - NTS_DM Other Other -39 201 120 8 644 1491 58 16 0 chrUextra 7836754 7836943 -21167713 - PROTOP_B DNA P 0 1153 962 8 644 2332 114 45 26 chrUextra 7837151 7837946 -21166710 - DMSAT6 Satellite Satellite -71 810 1 8 644 7057 1 0 0 chrUextra 7838055 7838855 -21165801 - ROVER-I_DM LTR Gypsy -4191 2393 1594 8 644 7200 12 7 0 chrUextra 7838962 7839768 -21164888 + R1_DM LINE R1 3838 4649 -707 8 644 3545 190 14 22 chrUextra 7839868 7840674 -21163982 + SAR_DM Satellite Satellite 411 1209 -263 8 644 4131 52 2 2 chrUextra 7840774 7841280 -21163376 - R1_DM LINE R1 -3750 1606 1101 8 644 2382 57 0 0 chrUextra 7841279 7841580 -21163076 - R1_DM LINE R1 -4739 617 317 8 644 3917 178 9 8 chrUextra 7841680 7842479 -21162177 - SAR_DM Satellite Satellite -455 1017 218 8 644 1273 24 0 18 chrUextra 7842617 7842784 -21161872 - NTS_DM Other Other -39 201 38 8 644 902 28 0 27 chrUextra 7842784 7842896 -21161760 - NTS_DM Other Other -107 133 25 8 644 1228 61 0 6 chrUextra 7842948 7843113 -21161543 - NTS_DM Other Other -39 201 38 8 644 803 28 0 52 chrUextra 7843113 7843228 -21161428 - NTS_DM Other Other -107 133 25 8 644 252 196 0 19 chrUextra 7843304 7843356 -21161300 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 8 644 422 151 0 0 chrUextra 7843492 7843565 -21161091 - ARS406_DM Unknown Unknown -280 73 1 8 644 3822 176 10 11 chrUextra 7843500 7844297 -21160359 + SAR_DM Satellite Satellite 221 1016 -456 8 644 2564 89 18 18 chrUextra 7844398 7845202 -21159454 - DMSAT6 Satellite Satellite -37 803 1 8 644 7098 11 42 0 chrUextra 7845304 7846110 -21158546 - Gypsy4_I LTR Gypsy -3648 2640 1801 8 644 912 218 27 9 chrUextra 7846245 7846467 -21158189 - TOM_I LTR Gypsy -3691 2421 2196 8 644 5982 3 0 1 chrUextra 7848022 7848680 -21155976 - DMRT1B LINE R1 -983 4200 3544 8 644 1314 0 0 0 chrUextra 7848682 7848828 -21155828 + (TTGTG)n Simple_repeat Simple_repeat 2 147 0 8 644 213 65 0 0 chrUextra 7849316 7849347 -21155309 + (CA)n Simple_repeat Simple_repeat 2 32 0 8 644 6010 24 24 1 chrUextra 7849834 7850549 -21154107 - PROTOP_B DNA P -426 727 1 8 644 383 167 56 0 chrUextra 7850568 7850640 -21154016 - Gypsy8_I LTR Gypsy -3905 442 367 8 644 6250 40 17 11 chrUextra 7850740 7851546 -21153110 - R1_DM LINE R1 -4124 1232 422 8 644 5301 27 2 2 chrUextra 7851647 7852268 -21152388 + R1_DM LINE R1 3294 3914 -1442 8 644 1292 77 87 11 chrUextra 7852267 7852452 -21152204 + R1_DM LINE R1 268 466 -4890 8 644 6944 14 65 0 chrUextra 7852552 7853358 -21151298 + STALKER4_I LTR Gypsy 3511 4368 -2162 8 644 7097 12 6 0 chrUextra 7853458 7854264 -21150392 + QUASIMODO_I LTR Gypsy 2697 3507 -2553 8 644 573 189 49 8 chrUextra 7854364 7854487 -21150169 - ARS406_DM Unknown Unknown -225 128 1 8 644 3348 174 39 22 chrUextra 7854395 7855170 -21149486 + SAR_DM Satellite Satellite 191 978 -494 8 644 3621 174 24 20 chrUextra 7855270 7856075 -21148581 - SAR_DM Satellite Satellite -470 1002 195 8 644 3480 193 15 22 chrUextra 7856176 7856980 -21147676 + SAR_DM Satellite Satellite 414 1211 -261 8 644 2077 304 21 21 chrUextra 7857084 7857847 -21146809 - Invader1_I LTR Gypsy -1123 2063 1301 8 644 3646 180 25 21 chrUextra 7857990 7858794 -21145862 + SAR_DM Satellite Satellite 209 1015 -457 8 644 7344 5 1 2 chrUextra 7858894 7859700 -21144956 + LSU-rRNA_Dme rRNA rRNA 655 1459 -2441 8 644 264 174 0 0 chrUextra 7859809 7859855 -21144801 - NOMAD_I LTR Gypsy 0 6572 6527 8 644 257 146 0 0 chrUextra 7859998 7860039 -21144617 - DMCR1A LINE CR1 -3686 784 744 8 644 628 139 51 17 chrUextra 7860106 7860314 -21144342 + DMCR1A LINE CR1 365 470 -4000 8 644 2186 21 14 0 chrUextra 7860325 7860606 -21144050 + DOC5_DM LINE Jockey 3979 4263 -419 8 644 493 284 47 47 chrUextra 7861617 7861938 -21142718 - DM297_I LTR Gypsy -3176 2991 2671 8 644 1558 37 19 0 chrUextra 7861764 7861978 -21142678 - TLD2 Unknown Unknown 0 218 1 8 644 306 288 0 0 chrUextra 7861909 7861989 -21142667 - Gypsy_DS LTR Gypsy -4187 3335 3256 8 644 423 300 29 34 chrUextra 7861995 7862315 -21142341 - TIRANT_I LTR Gypsy -3948 3744 3586 8 644 6212 28 0 0 chrUextra 7862518 7863238 -21141418 + R1_DM LINE R1 2249 2968 -2388 8 644 529 71 107 0 chrUextra 7863240 7863324 -21141332 + R1_DM LINE R1 3491 3583 -1773 8 644 2509 113 15 15 chrUextra 7863424 7864206 -21140450 - DMSAT6 Satellite Satellite -71 782 1 8 645 4399 114 6 8 chrUextra 7864333 7865136 -21139520 + BATUMI_I LTR Pao 4179 5035 -2879 8 645 635 67 32 31 chrUextra 7865573 7865687 -21138969 - BATUMI_LTR LTR Pao -152 120 35 8 645 1564 79 0 9 chrUextra 7865687 7865903 -21138753 - BATUMI_I LTR Pao 0 7963 7750 8 645 279 226 245 14 chrUextra 7866144 7866279 -21138377 + DM176_I LTR Gypsy 6008 6174 -246 8 645 1005 71 0 0 chrUextra 7866279 7866405 -21138251 - Copia2_LTR_DM LTR Copia 0 198 73 8 645 4942 9 11 4 chrUextra 7866398 7866948 -21137708 - Copia2_I LTR Copia -1871 2291 1738 8 645 1512 17 0 0 chrUextra 7867048 7867227 -21137429 + (AATAG)n Simple_repeat Simple_repeat 1 179 0 8 645 1196 79 6 0 chrUextra 7867246 7867424 -21137232 + (AATAG)n Simple_repeat Simple_repeat 2 180 0 8 645 1116 91 3 38 chrUextra 7867482 7867854 -21136802 + (AATAG)n Simple_repeat Simple_repeat 1 359 0 8 645 951 69 2 17 chrUextra 7867954 7868760 -21135896 - RSP Satellite Satellite -50 794 1 8 645 3712 179 7 12 chrUextra 7868865 7869636 -21135020 - SAR_DM Satellite Satellite -514 958 192 8 645 721 135 8 0 chrUextra 7869540 7869666 -21134990 + ARS406_DM Unknown Unknown 1 127 -226 8 645 3807 183 15 9 chrUextra 7869769 7870572 -21134084 + SAR_DM Satellite Satellite 246 1053 -419 8 645 2555 32 16 0 chrUextra 7870674 7870985 -21133671 - DIVER2_I LTR Pao 0 4147 3832 8 645 884 82 25 0 chrUextra 7871015 7871137 -21133519 - DIVER2_I LTR Pao -304 3843 3719 8 645 1609 33 0 99 chrUextra 7871114 7871347 -21133309 - DIVER2_I LTR Pao -2572 1575 1366 8 645 7042 24 0 0 chrUextra 7871578 7872383 -21132273 + R1_DM LINE R1 2488 3292 -2064 8 645 1488 22 0 0 chrUextra 7872501 7872681 -21131975 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 8 645 570 41 0 0 chrUextra 7873392 7873465 -21131191 + (AGATG)n Simple_repeat Simple_repeat 1 73 0 8 645 1620 0 0 0 chrUextra 7873465 7873645 -21131011 + (ACATG)n Simple_repeat Simple_repeat 1 180 0 8 645 1620 0 0 0 chrUextra 7873666 7874196 -21130460 + (AGATG)n Simple_repeat Simple_repeat 1 530 0 8 645 1358 77 0 11 chrUextra 7874296 7874481 -21130175 + BATUMI_I LTR Pao 7781 7963 0 8 645 1827 46 4 40 chrUextra 7874503 7874753 -21129903 + BATUMI_LTR LTR Pao 32 272 0 8 645 774 228 26 10 chrUextra 7874790 7874985 -21129671 - QUASIMODO_I LTR Gypsy -2719 3341 3144 8 645 446 193 149 0 chrUextra 7874988 7875102 -21129554 - QUASIMODO_I LTR Gypsy -3026 3034 2904 8 645 6872 26 4 2 chrUextra 7875202 7876008 -21128648 - R1_DM LINE R1 -1390 3966 3160 8 645 32 0 0 0 chrUextra 7876122 7876154 -21128502 + AT_rich Low_complexity Low_complexity 1 32 0 8 645 3327 52 42 5 chrUextra 7876154 7876583 -21128073 + PROTOP_A DNA P 661 1105 0 8 645 393 340 35 30 chrUextra 7876583 7876778 -21127878 + Gypsy6_I LTR Gypsy 1434 1629 -5383 8 645 2990 32 0 8 chrUextra 7877014 7877391 -21127265 - Invader1_I LTR Gypsy -2335 851 361 8 645 360 0 0 0 chrUextra 7877391 7877430 -21127226 - Invader1_LTR LTR Gypsy -384 39 1 8 645 928 84 0 0 chrUextra 7877923 7878054 -21126602 - Jockey2 LINE Jockey -1879 1549 1419 8 645 767 148 30 61 chrUextra 7878538 7878703 -21125953 - Gypsy5_LTR LTR Gypsy -194 236 77 8 645 7477 0 0 0 chrUextra 7878826 7879625 -21125031 - TIRANT_I LTR Gypsy -6893 799 1 8 645 558 164 9 52 chrUextra 7879734 7879850 -21124806 - Gypsy12_LTR LTR Gypsy -2225 111 1 8 645 444 281 0 0 chrUextra 7879850 7879972 -21124684 - DM297_I LTR Gypsy -2709 3458 3337 8 645 706 104 0 0 chrUextra 7879979 7880075 -21124581 - Gypsy12_I LTR Gypsy -4570 976 881 8 645 1003 142 76 59 chrUextra 7880072 7880391 -21124265 - Gypsy12_I LTR Gypsy -4790 756 366 8 645 996 99 7 0 chrUextra 7880396 7880538 -21124118 - Gypsy12_LTR LTR Gypsy -71 2265 2123 8 645 1290 154 107 0 chrUextra 7880640 7880893 -21123763 + DMRT1B LINE R1 4700 4979 -204 8 645 823 98 0 0 chrUextra 7880905 7881017 -21123639 + DMRT1B LINE R1 5072 5183 0 8 645 1868 126 90 104 chrUextra 7881010 7881443 -21123213 + IDEFIX_LTR LTR Gypsy 73 499 -95 8 645 2510 44 60 0 chrUextra 7882032 7882349 -21122307 - DMRT1C LINE R1 -2 5441 5106 8 645 1906 95 105 28 chrUextra 7882449 7882773 -21121883 - BATUMI_I LTR Pao -7614 349 1 8 645 2061 32 3 88 chrUextra 7882773 7883078 -21121578 - BATUMI_I LTR Pao -679 7284 7006 8 645 943 128 12 6 chrUextra 7883079 7883252 -21121404 + (CAATA)n Simple_repeat Simple_repeat 2 175 0 8 645 25 0 0 0 chrUextra 7883670 7883695 -21120961 + AT_rich Low_complexity Low_complexity 1 25 0 8 645 4762 21 7 10 chrUextra 7884304 7884881 -21119775 - BATUMI_I LTR Pao -962 7001 6427 8 645 1253 31 0 0 chrUextra 7884904 7885064 -21119592 + BATUMI_I LTR Pao 7303 7462 -501 8 645 1074 188 20 18 chrUextra 7885180 7885956 -21118700 - SAR_DM Satellite Satellite -749 777 1 8 645 315 197 26 0 chrUextra 7885893 7885969 -21118687 + XDMR_DM Unknown Unknown 255 332 -28 8 645 25 51 0 0 chrUextra 7886069 7886108 -21118548 + AT_rich Low_complexity Low_complexity 1 39 0 8 645 2387 176 48 28 chrUextra 7886115 7886651 -21118005 + Stalker2_I LTR Gypsy 291 837 -6565 8 645 1985 9 0 0 chrUextra 7886652 7886874 -21117782 + DM176_LTR LTR Gypsy 1 222 -285 8 645 2523 98 29 21 chrUextra 7886974 7887779 -21116877 - DMSAT6 Satellite Satellite -12 810 1 8 645 4045 5 0 0 chrUextra 7887879 7888316 -21116340 + QUASIMODO_LTR LTR Gypsy 222 658 0 8 645 1047 82 0 0 chrUextra 7888316 7888451 -21116205 + STALKER4_LTR LTR Gypsy 253 387 -15 8 645 3699 5 0 2 chrUextra 7888980 7889409 -21115247 + ROO_LTR LTR Pao 1 428 0 8 645 1554 0 0 0 chrUextra 7889409 7889589 -21115067 + ROO_I LTR Pao 1 180 -8076 8 645 2528 42 0 6 chrUextra 7889689 7890025 -21114631 + ROO_I LTR Pao 3528 3861 -4395 8 645 388 100 0 16 chrUextra 7890021 7890082 -21114574 + BATUMI_I LTR Pao 2013 2072 -5891 8 645 2918 47 10 19 chrUextra 7890080 7890494 -21114162 + BATUMI_I LTR Pao 1914 2323 -5640 8 645 3490 181 11 9 chrUextra 7890594 7891399 -21113257 + SAR_DM Satellite Satellite 262 1068 -404 8 645 1586 314 11 9 chrUextra 7891651 7892291 -21112365 + HMSBEAGLE_I LTR Gypsy 1440 2080 -4449 8 645 3003 199 12 20 chrUextra 7892405 7893204 -21111452 + SAR_DM Satellite Satellite 425 1217 -255 8 645 2272 181 59 26 chrUextra 7893309 7894114 -21110542 - SAR_DM Satellite Satellite -481 831 1 8 645 6356 24 32 2 chrUextra 7895119 7895924 -21108732 - R1_DM LINE R1 -1407 3949 3121 8 645 286 54 304 0 chrUextra 7896025 7896081 -21108575 - Stalker2_I LTR Gypsy -7088 314 242 8 645 289 96 0 37 chrUextra 7896255 7896309 -21108347 - Stalker2_I LTR Gypsy -7350 52 1 8 645 330 25 0 0 chrUextra 7896309 7896336 -21108320 - STALKER4_I LTR Gypsy -6503 27 1 8 645 3449 2 0 2 chrUextra 7896336 7896739 -21107917 - STALKER4_LTR LTR Gypsy 0 402 1 8 645 582 100 0 0 chrUextra 7896739 7896828 -21107828 + ROVER-I_DM LTR Gypsy 5110 5198 -1386 8 645 5629 62 33 6 chrUextra 7896929 7897718 -21106938 + TART_B1 LINE telomeric 2964 3773 -6881 8 645 238 303 12 18 chrUextra 7898055 7898223 -21106433 + (TTTA)n Simple_repeat Simple_repeat 2 168 0 8 645 265 240 23 76 chrUextra 7898342 7898473 -21106183 - ROVER-I_DM LTR Gypsy -6460 124 1 8 645 391 113 0 27 chrUextra 7898473 7898537 -21106119 - DMTOM1_LTR LTR Gypsy 0 410 349 8 645 483 150 10 20 chrUextra 7898537 7898639 -21106017 - DMTOM1_LTR LTR Gypsy 0 410 310 8 645 39 50 0 0 chrUextra 7899022 7899082 -21105574 + AT_rich Low_complexity Low_complexity 1 60 0 8 645 2927 57 0 9 chrUextra 7899644 7900058 -21104598 + IDEFIX_I LTR Gypsy 3250 3659 -1969 8 645 2187 129 10 26 chrUextra 7900058 7900448 -21104208 + GTWIN_LTR LTR Gypsy 1 384 -111 8 645 6576 12 0 0 chrUextra 7900549 7901354 -21103302 - QUASIMODO_I LTR Gypsy -4577 1483 679 8 645 6389 41 0 1 chrUextra 7901454 7902259 -21102397 + BATUMI_I LTR Pao 4396 5199 -2764 8 645 5606 32 1 23 chrUextra 7902360 7902807 -21101849 - DM176_I LTR Gypsy -5448 972 529 8 645 181 30 29 57 chrUextra 7902807 7902842 -21101814 + (TTA)n Simple_repeat Simple_repeat 3 36 0 8 645 5606 32 1 23 chrUextra 7902842 7903164 -21101492 - DM176_I LTR Gypsy -5892 528 220 8 645 3391 179 11 15 chrUextra 7903269 7904069 -21100587 + SAR_DM Satellite Satellite 212 1008 -464 8 645 1583 0 0 0 chrUextra 7904169 7904350 -21100306 + Gypsy3_I LTR Gypsy 5997 6177 0 8 645 2629 19 102 60 chrUextra 7904350 7904732 -21099924 + Gypsy3_LTR LTR Gypsy 1 398 0 8 645 2050 0 0 0 chrUextra 7904732 7904974 -21099682 + Gypsy3_I LTR Gypsy 1 242 -5935 8 645 1620 14 0 7 chrUextra 7905504 7905797 -21098859 + (GAGAA)n Simple_repeat Simple_repeat 1 291 0 8 645 4802 51 19 67 chrUextra 7905979 7906784 -21097872 + BATUMI_I LTR Pao 679 1444 -6519 8 645 6368 13 6 14 chrUextra 7906885 7907689 -21096967 + PROTOP_A DNA P 302 1099 -6 8 645 265 337 29 33 chrUextra 7908314 7908587 -21096069 - Gypsy6_I LTR Gypsy -5228 1784 1513 8 645 2754 191 18 11 chrUextra 7908694 7909496 -21095160 + SAR_DM Satellite Satellite 195 1248 -224 8 645 6444 4 0 0 chrUextra 7909599 7910339 -21094317 - LSU-rRNA_Dme rRNA rRNA -1373 2527 1788 8 645 782 11 0 0 chrUextra 7910504 7910595 -21094061 - NTS_DM Other Other -149 91 1 8 645 1756 17 17 17 chrUextra 7910595 7910835 -21093821 - NTS_DM Other Other 0 240 1 8 645 1734 21 17 17 chrUextra 7910835 7911075 -21093581 - NTS_DM Other Other 0 240 1 8 645 1679 22 17 17 chrUextra 7911075 7911309 -21093347 - NTS_DM Other Other 0 240 7 8 645 3496 213 44 17 chrUextra 7911409 7913119 -21091537 - SAR_DM Satellite Satellite -484 1755 1 8 645 4086 7 2 11 chrUextra 7913219 7913765 -21090891 + STALKER4_I LTR Gypsy 5979 6519 -11 8 645 2124 11 11 4 chrUextra 7913760 7914024 -21090632 + STALKER4_LTR LTR Gypsy 76 341 -61 8 645 6078 39 60 0 chrUextra 7914124 7914929 -21089727 + ROO_I LTR Pao 2012 2864 -5392 8 645 4863 110 15 1 chrUextra 7915030 7915774 -21088882 - Gypsy_I LTR Gypsy -291 6216 5463 8 645 231 139 0 0 chrUextra 7915775 7915818 -21088838 + G6_DM LINE Jockey 1 43 -1999 8 645 3528 42 135 1 chrUextra 7915934 7916739 -21087917 + R1_DM LINE R1 979 1891 -3465 8 645 1714 24 5 0 chrUextra 7916839 7917049 -21087607 - DMCR1A LINE CR1 -1345 3125 2915 8 645 4486 33 23 2 chrUextra 7917069 7917644 -21087012 - DMCR1A LINE CR1 -3067 1403 817 8 645 1420 69 60 8 chrUextra 7917744 7917978 -21086678 - DMCR1A LINE CR1 -4220 250 5 8 645 2607 108 170 0 chrUextra 7918002 7918549 -21086107 - DM297_I LTR Gypsy -4616 1551 912 8 645 2655 3 18 0 chrUextra 7918649 7918976 -21085680 + Invader3_I LTR Gypsy 4556 4888 0 8 645 2377 7 42 0 chrUextra 7918976 7919262 -21085394 + Invader3_LTR LTR Gypsy 1 298 0 8 645 1611 5 0 5 chrUextra 7919262 7919454 -21085202 + Invader3_I LTR Gypsy 1 191 -4697 8 645 3220 205 64 8 chrUextra 7919555 7920357 -21084299 - TAHRE LINE telomeric -8790 1673 827 8 645 1704 72 4 0 chrUextra 7920459 7920708 -21083948 - TRANSIB4 DNA Transib -2291 319 70 8 645 312 211 0 0 chrUextra 7920780 7920856 -21083800 - Gypsy_I LTR Gypsy -3 6504 6429 8 645 554 159 86 16 chrUextra 7920889 7921017 -21083639 + DNAREP1_DM LINE Penelope 432 568 -26 8 645 6270 31 19 1 chrUextra 7921362 7922166 -21082490 + DMRT1B LINE R1 2821 3638 -1545 8 645 4396 21 25 2 chrUextra 7922266 7922830 -21081826 - IDEFIX_LTR LTR Gypsy -17 577 1 8 645 241 105 0 0 chrUextra 7922798 7922836 -21081820 + BARI1 DNA Tc1 3 40 -1710 8 645 2562 48 9 0 chrUextra 7924327 7924659 -21079997 - DMRT1A LINE R1 -12 5171 4837 8 645 1837 18 0 0 chrUextra 7924658 7924878 -21079778 + Transib5 DNA Transib 962 1181 -1820 8 645 315 250 117 0 chrUextra 7924984 7925112 -21079544 - OSVALDO_I LTR Gypsy -4633 2020 1878 8 645 318 118 188 14 chrUextra 7925094 7925163 -21079493 - Gypsy8_I LTR Gypsy -3330 1017 937 8 645 1403 88 15 0 chrUextra 7925158 7925362 -21079294 - Gypsy8_I LTR Gypsy -3867 480 274 8 645 1801 78 26 48 chrUextra 7925360 7925778 -21078878 + DMSAT6 Satellite Satellite 10 418 -52 8 645 436 155 0 0 chrUextra 7926188 7926259 -21078397 - TAHRE LINE telomeric -2867 7596 7526 8 645 339 236 39 39 chrUextra 7926530 7926658 -21077998 - Copia_I LTR Copia -2314 2279 2152 8 645 30 0 0 0 chrUextra 7926831 7926861 -21077795 + AT_rich Low_complexity Low_complexity 1 30 0 8 645 1210 91 10 24 chrUextra 7926955 7927554 -21077102 + (TA)n Simple_repeat Simple_repeat 1 590 0 8 645 3064 196 12 19 chrUextra 7927690 7928494 -21076162 - SAR_DM Satellite Satellite -259 1213 415 8 645 6721 6 1 0 chrUextra 7928594 7929398 -21075258 + G6_DM LINE Jockey 1191 1995 -47 8 645 798 208 72 10 chrUextra 7929498 7929707 -21074949 - HETA LINE telomeric -1840 4241 4020 8 645 22 56 0 0 chrUextra 7929857 7929893 -21074763 + AT_rich Low_complexity Low_complexity 1 36 0 8 645 322 178 50 101 chrUextra 7929938 7930057 -21074599 + Copia_I LTR Copia 4401 4513 -80 8 645 201 162 0 0 chrUextra 7930413 7930450 -21074206 + A-rich Low_complexity Low_complexity 1 37 0 8 645 5891 36 4 1 chrUextra 7930451 7931206 -21073450 - R1_DM LINE R1 -3966 1390 634 8 645 6848 6 1 1 chrUextra 7931306 7932110 -21072546 + DMRT1A LINE R1 4225 5028 -155 8 645 5816 55 53 1 chrUextra 7932210 7933014 -21071642 + TART LINE telomeric 30 875 -13602 8 645 297 330 24 34 chrUextra 7933337 7933648 -21071008 - Gypsy3_I LTR Gypsy -5231 1781 1219 8 645 310 312 14 14 chrUextra 7933649 7933807 -21070849 - Gypsy2_I LTR Gypsy -4643 1492 1218 8 645 2265 108 10 24 chrUextra 7934023 7934822 -21069834 + DMSAT6 Satellite Satellite 1 787 -151 8 645 6452 30 1 2 chrUextra 7934922 7935726 -21068930 + R1_DM LINE R1 3757 4559 -797 8 645 3278 197 13 26 chrUextra 7935826 7936630 -21068026 - SAR_DM Satellite Satellite -372 793 1 8 645 6622 29 0 0 chrUextra 7936730 7937534 -21067122 - DIVER_I LTR Pao -3914 1729 926 8 645 4232 64 69 42 chrUextra 7937789 7938438 -21066218 - CIRCE LINE Composite -5386 970 304 8 645 1669 0 0 0 chrUextra 7938538 7938729 -21065927 - R2_DM LINE R2 -2374 1233 1043 8 645 5362 5 0 0 chrUextra 7938722 7939342 -21065314 - LSU-rRNA_Dme rRNA rRNA -1316 2584 1965 8 645 1080 21 107 0 chrUextra 7940775 7940915 -21063741 + PROTOP_B DNA P 1 155 -998 8 645 1747 81 0 0 chrUextra 7940913 7941149 -21063507 + Gypsy12_I LTR Gypsy 4657 4892 -654 8 645 5657 50 47 0 chrUextra 7941250 7942054 -21062602 - IDEFIX_I LTR Gypsy -1028 4600 3759 8 645 6556 17 6 1 chrUextra 7942154 7942958 -21061698 + R1_DM LINE R1 3447 4254 -1102 8 645 454 33 16 0 chrUextra 7943058 7943119 -21061537 - Gypsy4_I LTR Gypsy -3022 3266 3205 8 645 3324 20 8 0 chrUextra 7943110 7943507 -21061149 - Gypsy4_I LTR Gypsy -3599 2689 2290 8 645 2649 12 66 0 chrUextra 7943507 7943655 -21061001 - Stalker3_LTR LTR Gypsy 0 372 225 8 645 207 0 0 0 chrUextra 7943655 7943678 -21060978 + (CTTAT)n Simple_repeat Simple_repeat 2 24 0 8 645 2649 12 66 0 chrUextra 7943678 7943862 -21060794 - Stalker3_LTR LTR Gypsy -148 224 19 8 645 1352 62 5 10 chrUextra 7943962 7944156 -21060500 + BATUMI_I LTR Pao 7771 7963 0 8 645 1752 42 4 28 chrUextra 7944178 7944425 -21060231 + BATUMI_LTR LTR Pao 32 272 0 8 645 37 0 0 0 chrUextra 7944425 7944462 -21060194 + AT_rich Low_complexity Low_complexity 1 37 0 8 645 2081 16 4 0 chrUextra 7944517 7944766 -21059890 - PROTOP DNA P -1 4479 4230 8 645 5754 22 23 8 chrUextra 7944866 7945215 -21059441 + DM176_I LTR Gypsy 147 501 -5919 8 645 181 30 29 57 chrUextra 7945215 7945250 -21059406 + (TAA)n Simple_repeat Simple_repeat 3 36 0 8 645 5754 22 23 8 chrUextra 7945250 7945670 -21058986 + DM176_I LTR Gypsy 502 928 -5492 8 645 2777 151 18 21 chrUextra 7945770 7946569 -21058087 + SAR_DM Satellite Satellite 1 797 -500 8 645 924 75 0 45 chrUextra 7946417 7946571 -21058085 - ARS406_DM Unknown Unknown -164 189 43 8 645 6968 4 1 0 chrUextra 7946674 7947478 -21057178 - CIRCE LINE Composite -5482 874 70 8 645 2732 59 94 3 chrUextra 7947578 7948164 -21056492 - PROTOP_A DNA P -81 1024 522 8 645 1637 59 9 0 chrUextra 7948154 7948375 -21056281 - PROTOP DNA P -4184 296 74 8 645 5491 62 5 7 chrUextra 7948528 7949286 -21055370 + R1_DM LINE R1 23 779 -4577 8 645 2161 4 0 4 chrUextra 7949386 7949638 -21055018 + R1_DM LINE R1 5106 5356 0 8 645 2717 13 0 0 chrUextra 7949648 7949966 -21054690 + R1_DM LINE R1 5039 5356 0 8 645 1819 9 0 0 chrUextra 7949976 7950190 -21054466 + R1_DM LINE R1 5039 5252 -104 8 645 2700 207 14 12 chrUextra 7950292 7951092 -21053564 - SAR_DM Satellite Satellite -689 801 1 8 645 4888 2 0 2 chrUextra 7951194 7951757 -21052899 - LSU-rRNA_Dme rRNA rRNA -699 3201 2640 8 645 1885 5 0 0 chrUextra 7951779 7951998 -21052658 - R1_DM LINE R1 -8 5348 5130 8 645 305 279 107 89 chrUextra 7952221 7952501 -21052155 - Invader1_LTR LTR Gypsy -55 368 84 8 645 813 180 109 16 chrUextra 7952710 7952902 -21051754 + DMLTR5 LTR Gypsy 44 253 -13 8 645 2896 14 0 0 chrUextra 7953004 7953348 -21051308 - MDG1_LTR LTR Gypsy -12 430 87 8 645 423 100 0 0 chrUextra 7953348 7953418 -21051238 + (TTA)n Simple_repeat Simple_repeat 3 72 0 8 645 3371 174 10 18 chrUextra 7953907 7954701 -21049955 + SAR_DM Satellite Satellite 332 1119 -353 8 645 270 188 16 0 chrUextra 7954646 7954710 -21049946 - XDMR Unknown Unknown 0 361 297 8 645 6956 4 1 0 chrUextra 7954810 7955614 -21049042 + Gypsy6_I LTR Gypsy 1910 2714 -4298 8 645 316 0 0 0 chrUextra 7955714 7955756 -21048900 + Copia_I LTR Copia 4552 4593 0 8 645 2286 4 0 0 chrUextra 7955756 7956032 -21048624 + Copia_LTR LTR Copia 1 276 0 8 645 3973 8 2 0 chrUextra 7956032 7956518 -21048138 + STALKER4_I LTR Gypsy 3262 3748 -2782 8 645 5178 15 2 0 chrUextra 7956619 7957236 -21047420 + R1_DM LINE R1 1639 2256 -3100 8 645 1586 5 0 0 chrUextra 7957234 7957422 -21047234 - MICROPIA_I LTR Gypsy -3172 1304 1117 8 645 2389 90 37 22 chrUextra 7957522 7958302 -21046354 + DMSAT6 Satellite Satellite 1 792 -104 8 645 493 0 43 0 chrUextra 7959159 7959228 -21045428 - ALUII_DM Unknown Unknown 0 240 169 8 645 2028 186 14 20 chrUextra 7959331 7960131 -21044525 + SAR_DM Satellite Satellite 1 795 -677 8 645 1863 111 154 46 chrUextra 7960231 7960771 -21043885 - BATUMI_I LTR Pao -7239 724 127 8 645 1733 31 0 22 chrUextra 7960804 7961033 -21043623 - BATUMI_I LTR Pao -679 7284 7061 8 645 3199 189 11 10 chrUextra 7961134 7961929 -21042727 - SAR_DM Satellite Satellite -485 987 192 8 645 2151 148 158 17 chrUextra 7962048 7962572 -21042084 - TART LINE telomeric -4201 10276 9679 8 645 2194 19 4 8 chrUextra 7962572 7962840 -21041816 + PROTOP_A DNA P 1 267 -838 8 645 3193 54 42 26 chrUextra 7962940 7963397 -21041259 + CIRCE LINE Composite 2326 2789 -3567 8 645 829 76 0 0 chrUextra 7963413 7963531 -21041125 + CIRCE LINE Composite 4863 4980 -1376 8 645 3658 9 2 0 chrUextra 7963843 7964276 -21040380 + DOC2_DM LINE Jockey 2075 2508 -2285 8 645 3145 13 0 0 chrUextra 7964274 7964646 -21040010 + DOC2_DM LINE Jockey 3436 3807 -986 8 645 355 109 0 0 chrUextra 7964749 7964804 -21039852 + ARS406_DM Unknown Unknown 135 189 -164 8 645 3390 168 18 25 chrUextra 7964756 7965549 -21039107 - SAR_DM Satellite Satellite -257 1215 429 8 645 2312 116 19 19 chrUextra 7965649 7966433 -21038223 - DMSAT6 Satellite Satellite -71 784 1 8 645 5289 32 9 2 chrUextra 7966552 7967355 -21037301 + TART LINE telomeric 13462 14073 -404 8 645 4099 74 57 25 chrUextra 7967455 7968247 -21036409 - PROTOP DNA P -261 844 48 8 645 563 133 19 19 chrUextra 7968692 7968799 -21035857 + DNAREP1_DM LINE Penelope 2 108 -486 8 645 839 3 0 99 chrUextra 7968815 7969158 -21035498 + (TGAA)n Simple_repeat Simple_repeat 1 308 0 8 645 6614 21 4 0 chrUextra 7969261 7970064 -21034592 - R1_DM LINE R1 -1641 3715 2910 8 645 257 59 0 0 chrUextra 7970164 7970198 -21034458 + ARS406_DM Unknown Unknown 156 189 -164 8 645 3073 192 14 20 chrUextra 7970174 7970966 -21033690 - SAR_DM Satellite Satellite -281 1191 405 8 645 1158 137 0 43 chrUextra 7971067 7971648 -21033008 + (TA)n Simple_repeat Simple_repeat 1 556 0 8 645 581 128 0 67 chrUextra 7971677 7971870 -21032786 + (TA)n Simple_repeat Simple_repeat 1 180 0 8 645 2281 0 0 0 chrUextra 7971970 7972232 -21032424 + LSU-rRNA_Dme rRNA rRNA 3639 3900 0 8 645 27 29 0 0 chrUextra 7972304 7972338 -21032318 + AT_rich Low_complexity Low_complexity 1 34 0 8 645 22 56 0 0 chrUextra 7972402 7972438 -21032218 + AT_rich Low_complexity Low_complexity 1 36 0 8 645 246 150 0 0 chrUextra 7972443 7972483 -21032173 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 645 246 150 0 0 chrUextra 7972535 7972575 -21032081 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 645 255 125 0 0 chrUextra 7972618 7972658 -21031998 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 645 22 56 0 0 chrUextra 7972671 7972707 -21031949 + AT_rich Low_complexity Low_complexity 1 36 0 8 645 285 0 0 75 chrUextra 7972733 7972773 -21031883 + NTS_DM Other Other 25 61 -179 8 645 35 0 0 0 chrUextra 7973115 7973150 -21031506 + AT_rich Low_complexity Low_complexity 1 35 0 8 645 25 0 0 0 chrUextra 7973583 7973608 -21031048 + AT_rich Low_complexity Low_complexity 1 25 0 8 645 2448 205 37 20 chrUextra 7973776 7974578 -21030078 + SAR_DM Satellite Satellite 1 815 -242 8 645 5878 65 6 2 chrUextra 7974679 7975482 -21029174 + STALKER4_I LTR Gypsy 367 1172 -5358 8 645 6376 39 0 4 chrUextra 7975582 7976385 -21028271 - MAX_I LTR Pao -4839 3075 2276 8 645 306 227 93 0 chrUextra 7976488 7976585 -21028071 + GTWIN_LTR LTR Gypsy 300 405 -90 8 645 26 88 0 0 chrUextra 7976863 7976931 -21027725 + AT_rich Low_complexity Low_complexity 1 68 0 8 645 334 210 151 12 chrUextra 7977101 7977238 -21027418 + Gypsy_I LTR Gypsy 435 605 -5902 8 645 2795 37 125 0 chrUextra 7977388 7978191 -21026465 + DOC3_DM LINE Jockey 3382 4284 -456 8 645 3387 172 14 19 chrUextra 7978291 7979084 -21025572 - SAR_DM Satellite Satellite -315 1157 369 8 645 2230 11 0 4 chrUextra 7979194 7979470 -21025186 - PROTOP_A DNA P -586 519 245 8 645 4403 4 0 0 chrUextra 7979470 7979976 -21024680 - TABOR_LTR LTR Gypsy 0 506 1 8 645 6974 0 1 0 chrUextra 7980099 7980898 -21023758 - NOMAD_I LTR Gypsy -3102 3470 2671 8 645 240 175 117 58 chrUextra 7981144 7981247 -21023409 - Gypsy2_LTR LTR Gypsy -150 203 95 8 645 233 286 0 0 chrUextra 7981261 7981331 -21023325 - Gypsy2_I LTR Gypsy -91 6044 5975 8 645 359 211 0 0 chrUextra 7981340 7981416 -21023240 - Gypsy3_I LTR Gypsy -172 6005 5930 8 645 1598 276 10 2 chrUextra 7981382 7981799 -21022857 - Gypsy2_I LTR Gypsy -174 5961 5542 8 645 323 291 39 8 chrUextra 7982212 7982340 -21022316 + Copia2_I LTR Copia 567 698 -3464 8 645 369 0 0 0 chrUextra 7982347 7982392 -21022264 + Copia2_LTR_DM LTR Copia 154 198 0 8 645 2622 13 0 0 chrUextra 7982392 7982706 -21021950 + Copia2_I LTR Copia 1 314 -3848 8 645 2450 122 38 17 chrUextra 7982809 7983606 -21021050 + DMSAT6 Satellite Satellite 1 813 -151 8 645 714 116 0 0 chrUextra 7983709 7983830 -21020826 - ARS406_DM Unknown Unknown -232 121 1 8 645 3208 178 10 13 chrUextra 7983734 7984503 -21020153 + SAR_DM Satellite Satellite 192 958 -514 8 645 2831 195 42 21 chrUextra 7984613 7985401 -21019255 + SAR_DM Satellite Satellite 1 804 -208 8 645 379 91 0 15 chrUextra 7985348 7985415 -21019241 - ARS406_DM Unknown Unknown -238 115 50 8 645 488 60 95 0 chrUextra 7985527 7985611 -21019045 + MAX_I LTR Pao 824 915 -6999 8 645 298 0 0 0 chrUextra 7985725 7985761 -21018895 + MAX_I LTR Pao 920 955 -6959 8 645 815 164 87 156 chrUextra 7985800 7986248 -21018408 + MAX_I LTR Pao 938 1354 -6560 8 645 1383 12 0 6 chrUextra 7986418 7986590 -21018066 + MICROPIA_I LTR Gypsy 4306 4476 0 8 645 3877 11 0 61 chrUextra 7986590 7987097 -21017559 + MICROPIA_LTR LTR Gypsy 1 476 0 8 645 978 26 0 0 chrUextra 7987105 7987221 -21017435 + Invader1_LTR LTR Gypsy 1 116 -307 8 645 2177 8 0 4 chrUextra 7987321 7987588 -21017068 + MICROPIA_I LTR Gypsy 4211 4476 0 8 645 3888 6 0 61 chrUextra 7987588 7988093 -21016563 + MICROPIA_LTR LTR Gypsy 1 474 -2 8 645 5826 81 0 11 chrUextra 7988224 7989027 -21015629 - Gypsy12_I LTR Gypsy -241 5305 4512 8 645 2854 115 59 28 chrUextra 7989127 7989656 -21015000 - DMHMR2 Unknown Unknown -9 1203 659 8 645 1520 151 33 0 chrUextra 7989655 7989927 -21014729 - TAHRE LINE telomeric -8452 2011 1731 8 645 3285 168 19 28 chrUextra 7990030 7990830 -21013826 + SAR_DM Satellite Satellite 380 1172 -300 8 645 2086 12 31 4 chrUextra 7990933 7991190 -21013466 - BATUMI_I LTR Pao -7699 264 1 8 645 1861 21 28 83 chrUextra 7991190 7991478 -21013178 - BATUMI_LTR LTR Pao 0 272 1 8 645 21 0 0 0 chrUextra 7991615 7991636 -21013020 + AT_rich Low_complexity Low_complexity 1 21 0 8 645 6414 30 36 0 chrUextra 7991836 7992639 -21012017 - R1_DM LINE R1 -428 4928 4097 8 645 3192 122 96 75 chrUextra 7992739 7993542 -21011114 + PROTOP_B DNA P 292 1111 -42 8 645 6265 47 1 0 chrUextra 7994545 7995347 -21009309 + DMRT1B LINE R1 2874 3676 -1507 8 646 3674 51 2 0 chrUextra 7996349 7996820 -21007836 - Baggins1 LINE LOA -191 5262 4791 8 646 1267 58 0 17 chrUextra 7996976 7997151 -21007505 - R1_DM LINE R1 -3113 2243 2072 8 646 6382 35 1 4 chrUextra 7997251 7998048 -21006608 + BATUMI_I LTR Pao 4381 5175 -2788 8 646 2443 109 14 12 chrUextra 7998153 7998949 -21005707 - DMSAT6 Satellite Satellite -236 797 1 8 646 2680 3 0 6 chrUextra 7999055 7999369 -21005287 - ROO_LTR LTR Pao -116 312 1 8 646 4168 2 0 2 chrUextra 7999369 7999854 -21004802 - ROO_I LTR Pao -5437 2819 2336 8 646 1733 192 120 42 chrUextra 8000010 8000587 -21004069 + HETA LINE telomeric 5102 5723 -358 8 646 518 108 81 0 chrUextra 8000587 8000698 -21003958 + TART LINE telomeric 10370 10489 -3988 8 646 34 24 0 0 chrUextra 8000711 8000752 -21003904 + AT_rich Low_complexity Low_complexity 1 41 0 8 646 6423 21 8 0 chrUextra 8000859 8001661 -21002995 + ROO_I LTR Pao 3644 4451 -3805 8 646 294 297 104 86 chrUextra 8002166 8002446 -21002210 - Invader1_LTR LTR Gypsy -55 368 84 8 646 834 163 0 0 chrUextra 8003128 8003382 -21001274 + (AGATG)n Simple_repeat Simple_repeat 1 254 0 8 646 678 297 51 53 chrUextra 8003566 8003753 -21000903 + Gypsy4_I LTR Gypsy 2431 2766 -3654 8 646 1487 28 19 0 chrUextra 8003753 8003967 -21000689 + TLD2 Unknown Unknown 1 218 0 8 646 678 297 51 53 chrUextra 8003967 8004367 -21000289 + Gypsy4_I LTR Gypsy 2767 3490 -2930 8 646 3274 0 0 0 chrUextra 8004467 8004838 -20999818 - ROO_LTR LTR Pao -57 371 1 8 646 2573 153 0 0 chrUextra 8004838 8005269 -20999387 + Gypsy3_I LTR Gypsy 4940 5370 -807 8 646 1096 29 0 0 chrUextra 8005369 8005508 -20999148 - G5_DM LINE Jockey -116 4740 4602 8 646 2742 53 59 0 chrUextra 8005505 8005879 -20998777 - G5_DM LINE Jockey -489 4367 3972 8 646 21 0 0 0 chrUextra 8005910 8005931 -20998725 + AT_rich Low_complexity Low_complexity 1 21 0 8 646 2277 176 6 9 chrUextra 8006273 8007073 -20997583 - SAR_DM Satellite Satellite -464 798 1 8 646 4274 20 7 11 chrUextra 8007173 8007723 -20996933 + BATUMI_I LTR Pao 6454 7001 -962 8 646 2147 269 26 36 chrUextra 8007174 8007975 -20996681 - MAX_I LTR Pao -684 7230 6438 8 646 1041 8 0 0 chrUextra 8008075 8008204 -20996452 - STALKER4_LTR LTR Gypsy -273 129 1 8 646 4942 21 45 0 chrUextra 8008204 8008877 -20995779 - STALKER4_I LTR Gypsy 0 6530 5828 8 646 6744 9 0 6 chrUextra 8009879 8010681 -20993975 - DMRT1B LINE R1 -1665 3518 2722 8 646 3147 184 14 22 chrUextra 8010784 8011567 -20993089 + SAR_DM Satellite Satellite 405 1181 -291 8 646 1915 0 4 0 chrUextra 8011683 8011916 -20992740 + Copia_LTR LTR Copia 43 276 0 8 646 4814 0 0 2 chrUextra 8011916 8012483 -20992173 - MDG3_I LTR Gypsy -343 4643 4078 8 646 3061 191 20 24 chrUextra 8012586 8013387 -20991269 - SAR_DM Satellite Satellite -261 1211 414 8 646 3755 18 0 0 chrUextra 8013487 8013935 -20990721 + NINJA_I LTR Pao 3454 3901 -2110 8 646 2861 23 0 0 chrUextra 8013936 8014289 -20990367 + NINJA_I LTR Pao 4175 4527 -1484 8 646 1252 18 0 6 chrUextra 8014392 8014557 -20990099 + NTS_DM Other Other 38 201 -39 8 646 870 9 0 27 chrUextra 8014609 8014721 -20989935 + NTS_DM Other Other 25 133 -107 8 646 1417 20 20 20 chrUextra 8014721 8014924 -20989732 + NTS_DM Other Other 38 240 0 8 646 1642 38 17 21 chrUextra 8014924 8015165 -20989491 + NTS_DM Other Other 1 240 0 8 646 2331 187 10 2 chrUextra 8015291 8016092 -20988564 - SAR_DM Satellite Satellite -667 806 1 8 646 4513 22 55 0 chrUextra 8016193 8016995 -20987661 - FW_DM LINE Jockey -1049 3643 2798 8 646 2362 93 29 24 chrUextra 8017099 8017895 -20986761 - DMSAT6 Satellite Satellite -32 799 1 8 646 6579 19 9 0 chrUextra 8017997 8018799 -20985857 - Copia2_I LTR Copia -1060 3102 2294 8 646 425 254 7 7 chrUextra 8018900 8019043 -20985613 + IDEFIX_I LTR Gypsy 375 517 -5111 8 646 501 259 169 6 chrUextra 8019073 8019399 -20985257 + IDEFIX_I LTR Gypsy 676 1054 -4574 8 646 446 30 72 43 chrUextra 8019416 8019485 -20985171 + DOC3_DM LINE Jockey 1 71 -4669 8 646 1605 46 5 0 chrUextra 8019483 8019700 -20984956 + DOC3_DM LINE Jockey 643 860 -3880 8 646 5118 3 2 0 chrUextra 8019801 8020394 -20984262 - ROO_I LTR Pao -675 7581 6988 8 646 1806 14 0 0 chrUextra 8020381 8020603 -20984053 - ROO_I LTR Pao -3060 5196 4975 8 646 6552 26 0 0 chrUextra 8020703 8021505 -20983151 - R1_DM LINE R1 -2175 3181 2380 8 646 6800 5 0 0 chrUextra 8021605 8022407 -20982249 - DOC LINE Jockey -3287 1438 637 8 646 4315 102 90 18 chrUextra 8022507 8023309 -20981347 + TART LINE telomeric 9281 10140 -4337 8 646 6348 42 1 1 chrUextra 8023409 8024211 -20980445 - R1_DM LINE R1 -3456 1900 1099 8 646 2784 184 9 9 chrUextra 8024311 8025112 -20979544 - SAR_DM Satellite Satellite -732 801 1 8 646 518 108 81 0 chrUextra 8025347 8025458 -20979198 + TART LINE telomeric 10370 10489 -3988 8 646 27 49 0 0 chrUextra 8025471 8025512 -20979144 + AT_rich Low_complexity Low_complexity 1 41 0 8 646 5097 70 12 2 chrUextra 8026113 8026897 -20977759 - DMRT1A LINE R1 -3277 1906 1075 8 646 766 109 0 0 chrUextra 8027014 8027142 -20977514 - ARS406_DM Unknown Unknown -225 128 1 8 646 3263 172 12 13 chrUextra 8027049 8027814 -20976842 + SAR_DM Satellite Satellite 195 958 -514 8 646 561 291 25 20 chrUextra 8027915 8028291 -20976365 + Gypsy6_I LTR Gypsy 5178 5318 -1694 8 646 870 9 0 27 chrUextra 8028822 8028934 -20975722 - NTS_DM Other Other -107 133 25 8 646 1252 18 0 6 chrUextra 8028986 8029151 -20975505 - NTS_DM Other Other -39 201 38 8 646 870 9 0 27 chrUextra 8029151 8029263 -20975393 - NTS_DM Other Other -107 133 25 8 646 22 56 0 0 chrUextra 8029289 8029325 -20975331 + AT_rich Low_complexity Low_complexity 1 36 0 8 646 255 125 0 0 chrUextra 8029338 8029378 -20975278 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 646 246 150 0 0 chrUextra 8029421 8029461 -20975195 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 646 6832 10 2 0 chrUextra 8029717 8030518 -20974138 - Copia2_I LTR Copia -830 3332 2530 8 646 6668 8 1 1 chrUextra 8030618 8031419 -20973237 + LSU-rRNA_Dme rRNA rRNA 470 1270 -2630 8 646 4254 47 69 3 chrUextra 8031519 8032113 -20972543 - DIVER2_I LTR Pao -1689 2458 1826 8 646 796 185 10 58 chrUextra 8032113 8032320 -20972336 + Gypsy5_LTR LTR Gypsy 1 197 -233 8 646 6452 11 26 0 chrUextra 8032420 8033221 -20971435 + STALKER4_I LTR Gypsy 2230 3051 -3479 8 646 22 56 0 0 chrUextra 8033342 8033378 -20971278 + AT_rich Low_complexity Low_complexity 1 36 0 8 646 255 125 0 0 chrUextra 8033391 8033431 -20971225 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 646 246 150 0 0 chrUextra 8033474 8033514 -20971142 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 646 246 150 0 0 chrUextra 8033557 8033597 -20971059 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 646 27 29 0 0 chrUextra 8033691 8033725 -20970931 + AT_rich Low_complexity Low_complexity 1 34 0 8 646 2844 0 0 0 chrUextra 8033797 8034122 -20970534 - LSU-rRNA_Dme rRNA rRNA 0 3900 3576 8 646 39 50 0 0 chrUextra 8035430 8035490 -20969166 + AT_rich Low_complexity Low_complexity 1 60 0 8 646 26 50 0 0 chrUextra 8035661 8035701 -20968955 + AT_rich Low_complexity Low_complexity 1 40 0 8 646 1480 43 0 0 chrUextra 8035736 8035924 -20968732 + ROO_LTR LTR Pao 1 188 -240 8 646 4799 10 7 2 chrUextra 8036024 8036607 -20968049 - FW_DM LINE Jockey -2612 2080 1495 8 646 1757 9 5 18 chrUextra 8036607 8036825 -20967831 + ACCORD2_LTR LTR Gypsy 1 215 0 8 646 23 0 0 0 chrUextra 8037309 8037332 -20967324 + AT_rich Low_complexity Low_complexity 1 23 0 8 646 1526 29 0 99 chrUextra 8037476 8037709 -20966947 + DIVER2_I LTR Pao 1366 1575 -2572 8 646 6562 18 1 11 chrUextra 8037826 8038627 -20966029 + Gypsy12_I LTR Gypsy 856 1648 -3898 8 646 3251 177 14 20 chrUextra 8038727 8039519 -20965137 - SAR_DM Satellite Satellite -501 971 185 8 646 2041 182 83 25 chrUextra 8039683 8040429 -20964227 + SAR_DM Satellite Satellite 1 789 -208 8 646 576 39 0 0 chrUextra 8040532 8040610 -20964046 + STALKER4_I LTR Gypsy 6453 6530 0 8 646 3036 60 1 14 chrUextra 8040620 8041051 -20963605 + STALKER4_LTR LTR Gypsy 9 399 -3 8 646 2351 11 4 0 chrUextra 8041051 8041330 -20963326 + Gypsy4_I LTR Gypsy 896 1175 -5113 8 646 364 228 53 53 chrUextra 8041441 8041612 -20963044 - Gypsy12A_LTR LTR Gypsy -1285 995 825 8 646 4357 34 74 21 chrUextra 8041624 8042231 -20962425 - Baggins1 LINE LOA -5 5448 4810 8 646 527 205 15 76 chrUextra 8042331 8042541 -20962115 + TOM_I LTR Gypsy 858 1085 -5082 8 646 977 265 48 34 chrUextra 8042681 8043123 -20961533 + TOM_I LTR Gypsy 1328 1775 -4337 8 646 3268 182 9 14 chrUextra 8043232 8044027 -20960629 - SAR_DM Satellite Satellite -487 985 195 8 646 3328 177 11 13 chrUextra 8044133 8044928 -20959728 - SAR_DM Satellite Satellite -484 988 195 8 646 4093 0 0 2 chrUextra 8045034 8045511 -20959145 + FW_DM LINE Jockey 4203 4678 -14 8 646 1620 19 0 0 chrUextra 8045511 8045833 -20958823 + (GAGAA)n Simple_repeat Simple_repeat 1 322 0 8 646 410 100 14 0 chrUextra 8045936 8046006 -20958650 - ARS406_DM Unknown Unknown -282 71 1 8 646 3335 181 24 8 chrUextra 8045945 8046736 -20957920 + SAR_DM Satellite Satellite 224 1027 -445 8 646 1583 11 5 0 chrUextra 8046836 8047024 -20957632 - Invader1_LTR LTR Gypsy -234 189 1 8 646 5054 8 23 10 chrUextra 8047024 8047637 -20957019 - CIRCE LINE Composite -1984 4372 3752 8 646 204 40 0 0 chrUextra 8048322 8048347 -20956309 + (TTG)n Simple_repeat Simple_repeat 2 26 0 8 646 6544 16 6 6 chrUextra 8048638 8049439 -20955217 + FW_DM LINE Jockey 3401 4201 -491 8 646 6585 22 0 0 chrUextra 8049539 8050338 -20954318 - FW_DM LINE Jockey -913 3779 2981 8 646 868 338 39 35 chrUextra 8050441 8051233 -20953423 - HMSBEAGLE_I LTR Gypsy -1599 4930 4136 8 646 631 17 0 0 chrUextra 8051342 8051424 -20953232 + Gypsy12_LTR LTR Gypsy 2199 2336 0 8 646 4351 40 20 28 chrUextra 8051424 8052142 -20952514 + Gypsy12_I LTR Gypsy 1 767 -4779 8 646 664 206 0 7 chrUextra 8052329 8052471 -20952185 + HETRP_DM Satellite Satellite 1529 1669 -203 8 646 689 206 0 7 chrUextra 8052640 8052782 -20951874 + HETRP_DM Satellite Satellite 1529 1669 -203 8 646 430 209 0 11 chrUextra 8052951 8053043 -20951613 + HETRP_DM Satellite Satellite 1529 1619 -253 8 646 3439 184 9 8 chrUextra 8053143 8053944 -20950712 - SAR_DM Satellite Satellite -404 1068 267 8 646 5991 44 39 1 chrUextra 8054044 8054845 -20949811 + R1_DM LINE R1 835 1665 -3691 8 646 3954 84 72 83 chrUextra 8054945 8055670 -20948986 + Invader1_I LTR Gypsy 2470 3186 0 8 646 323 132 0 93 chrUextra 8055671 8055746 -20948910 + Invader1_LTR LTR Gypsy 2 69 -354 8 646 1555 136 185 26 chrUextra 8056196 8056499 -20948157 + DMRT1B LINE R1 4815 5165 -18 8 646 2618 94 19 6 chrUextra 8056747 8057548 -20947108 + DMSAT6 Satellite Satellite 1 810 -85 8 646 370 178 50 101 chrUextra 8057681 8057800 -20946856 - Copia_I LTR Copia -80 4513 4401 8 646 22 56 0 0 chrUextra 8057845 8057881 -20946775 + AT_rich Low_complexity Low_complexity 1 36 0 8 646 2077 179 36 10 chrUextra 8058035 8058446 -20946210 + HETA LINE telomeric 4031 4452 -1629 8 646 3685 184 15 12 chrUextra 8058551 8059350 -20945306 - SAR_DM Satellite Satellite -417 1055 255 8 646 3443 202 53 12 chrUextra 8059511 8060251 -20944405 + HETA LINE telomeric 669 1438 -4643 8 646 236 159 0 83 chrUextra 8060362 8060410 -20944246 - HETRP_DM Satellite Satellite -310 1562 1519 8 646 243 208 0 19 chrUextra 8060457 8060511 -20944145 - HETRP_DM Satellite Satellite -240 1632 1580 8 646 855 176 12 29 chrUextra 8060554 8060724 -20943932 - HETRP_DM Satellite Satellite -190 1682 1516 8 646 315 185 250 42 chrUextra 8060772 8060868 -20943788 - HETRP_DM Satellite Satellite -238 1634 1519 8 646 243 208 0 19 chrUextra 8060915 8060969 -20943687 - HETRP_DM Satellite Satellite -240 1632 1580 8 646 689 163 14 36 chrUextra 8061012 8061152 -20943504 - HETRP_DM Satellite Satellite -190 1682 1546 8 646 7016 28 0 0 chrUextra 8061252 8062053 -20942603 - R1_DM LINE R1 -1988 3368 2568 8 646 1207 0 7 0 chrUextra 8062153 8062289 -20942367 - NOMAD_I LTR Gypsy -6435 137 1 8 646 3768 7 0 0 chrUextra 8062289 8062698 -20941958 - NOMAD_LTR LTR Gypsy 0 518 110 8 646 515 190 236 52 chrUextra 8062718 8062951 -20941705 - ROVER-LTR_DM LTR Gypsy -2 365 90 8 646 1023 79 7 0 chrUextra 8063054 8063193 -20941463 - R1_DM LINE R1 -5216 140 1 8 646 987 44 0 0 chrUextra 8063226 8063340 -20941316 - R1_DM LINE R1 0 5356 5243 8 646 4401 29 15 0 chrUextra 8063337 8063855 -20940801 - R1_DM LINE R1 -290 5066 4541 8 646 1861 94 0 0 chrUextra 8063955 8064209 -20940447 + DMRT1B LINE R1 1827 2080 -3103 8 646 3855 73 119 0 chrUextra 8064206 8064751 -20939905 + DMRT1B LINE R1 2229 2838 -2345 8 646 7402 4 1 1 chrUextra 8064856 8065657 -20938999 + SSU-rRNA_Dme rRNA rRNA 118 918 -1077 8 646 6887 20 24 2 chrUextra 8065757 8066558 -20938098 - R1_DM LINE R1 -1375 3981 3164 8 646 3536 170 14 21 chrUextra 8066660 8067435 -20937221 - SAR_DM Satellite Satellite -523 949 180 8 646 688 177 0 0 chrUextra 8067328 8067458 -20937198 + ARS406_DM Unknown Unknown 1 130 -223 8 646 263 91 0 0 chrUextra 8067560 8067593 -20937063 + Baggins1 LINE LOA 4727 4759 -694 8 646 757 103 241 0 chrUextra 8067598 8067743 -20936913 + FB4_DM DNA Tc1 3908 4087 -2 8 646 6990 0 0 8 chrUextra 8068460 8069261 -20935395 + ROO_I LTR Pao 4448 5242 -3014 8 646 3327 236 24 17 chrUextra 8069361 8071061 -20933595 - SAR_DM Satellite Satellite -545 1712 1 8 646 2398 38 0 3 chrUextra 8071165 8071453 -20933203 - QUASIMODO_I LTR Gypsy -5773 287 1 8 646 4569 8 10 4 chrUextra 8071453 8071964 -20932692 - QUASIMODO_LTR LTR Gypsy 0 658 145 8 646 3226 159 13 15 chrUextra 8072064 8072855 -20931801 - SAR_DM Satellite Satellite -1005 788 1 8 646 407 257 114 96 chrUextra 8073355 8073635 -20931021 - Invader1_LTR LTR Gypsy -55 368 84 8 646 3685 183 9 10 chrUextra 8073866 8074667 -20929989 - SAR_DM Satellite Satellite -417 1055 256 8 646 6358 59 26 1 chrUextra 8074767 8075568 -20929088 + TART_B1 LINE telomeric 2723 3543 -7111 8 646 3575 176 19 24 chrUextra 8075671 8076469 -20928187 - SAR_DM Satellite Satellite -300 1172 379 8 646 3704 183 13 9 chrUextra 8076572 8077364 -20927292 + SAR_DM Satellite Satellite 282 1076 -396 8 646 4715 41 64 9 chrUextra 8077470 8078270 -20926386 - BATUMI_I LTR Pao -2180 5783 4940 8 646 317 225 50 0 chrUextra 8078371 8078451 -20926205 + DMCR1A LINE CR1 4346 4429 -41 8 646 21 0 0 0 chrUextra 8078573 8078594 -20926062 + AT_rich Low_complexity Low_complexity 1 21 0 8 646 679 116 316 5 chrUextra 8078964 8079169 -20925487 + DNAREP1_DM LINE Penelope 1 269 -325 8 646 4608 31 0 0 chrUextra 8079270 8079822 -20924834 - MDG1_I LTR Gypsy -3063 3533 2982 8 646 2029 36 0 4 chrUextra 8079823 8080070 -20924586 - MDG1_I LTR Gypsy -4135 2461 2216 8 646 2041 181 11 6 chrUextra 8080177 8080962 -20923694 + SAR_DM Satellite Satellite 1 788 -558 8 646 2682 33 0 0 chrUextra 8081070 8081376 -20923280 + CIRCE LINE Composite 6051 6356 0 8 646 4354 24 8 0 chrUextra 8081376 8081870 -20922786 + CIRCE LINE Composite 1 498 -5858 8 646 3827 216 4 1 chrUextra 8081970 8082768 -20921888 + BLOOD_I LTR Gypsy 3753 4552 -2061 8 646 2871 183 28 71 chrUextra 8082870 8083669 -20920987 + SAR_DM Satellite Satellite 295 1058 -414 8 646 2867 6 0 0 chrUextra 8083770 8084090 -20920566 - DOC LINE Jockey -2795 1930 1611 8 646 231 235 97 81 chrUextra 8084282 8084467 -20920189 - Gypsy5_I LTR Gypsy -586 5923 5736 8 646 7314 4 0 0 chrUextra 8084670 8085470 -20919186 + R1_DM LINE R1 2627 3426 -1930 8 646 6752 23 52 2 chrUextra 8085570 8086370 -20918286 + R1_DM LINE R1 2117 2956 -2400 8 646 2115 4 0 13 chrUextra 8086470 8086707 -20917949 + BEL_I LTR Pao 5171 5404 0 8 646 3377 0 0 0 chrUextra 8086707 8087068 -20917588 + BEL_LTR LTR Pao 1 361 0 8 646 1661 30 0 0 chrUextra 8087068 8087268 -20917388 - PROTOP DNA P -3497 983 784 8 646 2597 101 23 45 chrUextra 8087370 8088147 -20916509 - DMSAT6 Satellite Satellite -83 759 1 8 646 6923 14 5 0 chrUextra 8088270 8089070 -20915586 - PROTOP DNA P -82 4398 3595 8 646 1838 33 124 0 chrUextra 8089397 8089638 -20915018 + Baggins1 LINE LOA 4727 4997 -456 8 646 1043 50 0 92 chrUextra 8089634 8089787 -20914869 + Baggins1 LINE LOA 5315 5453 0 8 646 5564 10 91 0 chrUextra 8090070 8090870 -20913786 - FW_DM LINE Jockey -62 4630 3758 8 646 7344 1 0 0 chrUextra 8090970 8091770 -20912886 - ROO_I LTR Pao -5517 2739 1940 8 646 3380 198 12 12 chrUextra 8091870 8092667 -20911989 - SAR_DM Satellite Satellite -484 988 192 8 646 4169 2 79 0 chrUextra 8092770 8093570 -20911086 - FW_DM LINE Jockey -1128 3564 2702 8 646 7296 2 2 2 chrUextra 8093670 8094470 -20910186 - LSU-rRNA_Dme rRNA rRNA -2216 1684 885 8 646 3588 40 22 4 chrUextra 8094570 8095370 -20909286 + R1_DM LINE R1 727 1636 -3720 8 646 3604 22 0 0 chrUextra 8095470 8095880 -20908776 + NINJA_I LTR Pao 1188 1597 -4414 8 646 3027 82 0 3 chrUextra 8095878 8096270 -20908386 - R1_DM LINE R1 -3535 1821 1431 8 646 1761 30 0 0 chrUextra 8096370 8096568 -20908088 + PROTOP DNA P 4283 4480 0 8 646 22 80 0 0 chrUextra 8096928 8096978 -20907678 + AT_rich Low_complexity Low_complexity 1 50 0 8 646 29 47 0 0 chrUextra 8097024 8097067 -20907589 + AT_rich Low_complexity Low_complexity 1 43 0 8 646 21 89 0 0 chrUextra 8097103 8097159 -20907497 + AT_rich Low_complexity Low_complexity 1 56 0 8 646 2567 11 0 0 chrUextra 8097270 8097549 -20907107 - LSU-rRNA_Dme rRNA rRNA -1044 2856 2578 8 646 4829 2 23 0 chrUextra 8097545 8098070 -20906586 - R2_DM LINE R2 -6 3601 3065 8 646 2136 66 10 27 chrUextra 8098170 8098464 -20906192 + FW3_DM LINE Jockey 847 1135 -1997 8 646 1692 84 9 0 chrUextra 8098467 8098694 -20905962 + FW3_DM LINE Jockey 1659 1887 -1245 8 646 4881 6 0 2 chrUextra 8099070 8099603 -20905053 + R1_DM LINE R1 4825 5356 0 8 646 2332 30 0 0 chrUextra 8099601 8099870 -20904786 + LSU-rRNA_Dme rRNA rRNA 2640 2908 -992 8 646 4455 8 0 0 chrUextra 8099970 8100450 -20904206 - R2_DM LINE R2 -1153 2454 1975 8 646 3021 0 0 0 chrUextra 8100446 8100770 -20903886 - LSU-rRNA_Dme rRNA rRNA -1319 2581 2258 8 646 3489 106 65 70 chrUextra 8100889 8101662 -20902994 + BATUMI_I LTR Pao 1 769 -7194 8 646 6863 22 16 1 chrUextra 8101770 8102570 -20902086 - R1_DM LINE R1 -790 4566 3755 8 646 6166 90 15 0 chrUextra 8102670 8103470 -20901186 - GTWIN_I LTR Gypsy -2784 3637 2826 8 646 3475 179 35 27 chrUextra 8103573 8104368 -20900288 + SAR_DM Satellite Satellite 1 801 -216 8 646 3305 194 11 33 chrUextra 8104479 8105269 -20899387 - SAR_DM Satellite Satellite -569 772 1 8 646 7079 15 1 1 chrUextra 8105370 8106169 -20898487 - R1_DM LINE R1 -751 4605 3807 8 646 7435 4 0 0 chrUextra 8106270 8107070 -20897586 + DIVER_I LTR Pao 2588 3387 -2256 8 646 3604 87 4 42 chrUextra 8107170 8107720 -20896936 + Gypsy12_I LTR Gypsy 74 602 -4944 8 646 1523 86 164 0 chrUextra 8107738 8107970 -20896686 + Gypsy12_I LTR Gypsy 4395 4664 -882 8 646 6958 30 0 0 chrUextra 8108070 8108870 -20895786 + MAX_I LTR Pao 4894 5693 -2221 8 646 6927 16 30 0 chrUextra 8108973 8109770 -20894886 - R1_DM LINE R1 -2567 2789 1969 8 646 3097 198 26 26 chrUextra 8109877 8110670 -20893986 + SAR_DM Satellite Satellite 1 793 -216 8 646 6748 14 38 11 chrUextra 8110770 8111570 -20893086 - DOC2_DM LINE Jockey -2400 2393 1573 8 646 5431 26 3 0 chrUextra 8111670 8112288 -20892368 + DIVER2_I LTR Pao 448 1067 -3080 8 646 800 36 242 0 chrUextra 8112284 8112470 -20892186 + DIVER2_I LTR Pao 2842 3072 -1075 8 646 7181 9 0 4 chrUextra 8112570 8113370 -20891286 - STALKER4_I LTR Gypsy -1570 4960 4164 8 646 3216 214 9 9 chrUextra 8114371 8115162 -20889494 - SAR_DM Satellite Satellite -464 1008 218 8 646 3621 184 18 12 chrUextra 8115271 8116070 -20888586 + SAR_DM Satellite Satellite 227 1029 -443 8 646 3398 41 10 0 chrUextra 8116170 8116586 -20888070 - IDEFIX_I LTR Gypsy -5208 420 1 8 646 220 200 13 51 chrUextra 8116787 8116866 -20887790 + T-rich Low_complexity Low_complexity 1 76 0 8 646 6253 44 21 5 chrUextra 8117070 8117870 -20886786 + IDEFIX_I LTR Gypsy 3049 3861 -1767 8 646 6921 31 0 0 chrUextra 8117970 8118768 -20885888 - DMRT1B LINE R1 -1402 3781 2984 8 646 7415 2 0 0 chrUextra 8118875 8119670 -20884986 - Invader1_I LTR Gypsy -299 2887 2093 8 646 1901 47 0 4 chrUextra 8119770 8120005 -20884651 + TRANSIB2 DNA Transib 389 622 -2222 8 646 4379 43 20 4 chrUextra 8120033 8120570 -20884086 + TRANSIB2 DNA Transib 1027 1572 -1272 8 646 274 125 0 0 chrUextra 8120671 8120711 -20883945 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 646 22 56 0 0 chrUextra 8120724 8120760 -20883896 + AT_rich Low_complexity Low_complexity 1 36 0 8 646 936 9 0 27 chrUextra 8120786 8120898 -20883758 + NTS_DM Other Other 25 133 -107 8 646 1350 18 0 6 chrUextra 8120898 8121063 -20883593 + NTS_DM Other Other 38 201 -39 8 646 923 18 0 27 chrUextra 8121115 8121227 -20883429 + NTS_DM Other Other 25 133 -107 8 646 1350 18 0 6 chrUextra 8121227 8121392 -20883264 + NTS_DM Other Other 38 201 -39 8 646 6937 30 18 0 chrUextra 8121570 8122370 -20882286 + DIVER_I LTR Pao 800 1613 -4030 8 646 3525 40 0 2 chrUextra 8122470 8122897 -20881759 - IDEFIX_I LTR Gypsy -5202 426 1 8 646 2105 37 0 0 chrUextra 8123025 8123269 -20881387 + PROTOP_A DNA P 1 244 -861 8 646 3375 88 16 2 chrUextra 8123370 8123815 -20880841 - Gypsy_I LTR Gypsy -594 5913 5463 8 646 246 139 0 0 chrUextra 8123816 8123859 -20880797 + G6_DM LINE Jockey 1 43 -1999 8 646 627 124 9 0 chrUextra 8124269 8124374 -20880282 - ARS406_DM Unknown Unknown -247 106 1 8 646 3481 178 9 8 chrUextra 8124281 8125068 -20879588 + SAR_DM Satellite Satellite 1 787 -542 8 646 1324 86 91 0 chrUextra 8125168 8125365 -20879291 + Gypsy9_LTR LTR Gypsy 51 265 -71 8 646 3402 91 86 53 chrUextra 8125350 8125967 -20878689 + Gypsy9_I LTR Gypsy 12 648 -4029 8 80 3591 186 8 10 chrUextra 8126068 8126848 -20877808 - SAR_DM Satellite Satellite -514 958 181 8 647 764 114 0 8 chrUextra 8126742 8126866 -20877790 + ARS406_DM Unknown Unknown 1 123 -230 8 647 1865 45 0 0 chrUextra 8126966 8127188 -20877468 + DM1731_LTR LTR Copia 115 336 0 8 647 4948 28 7 0 chrUextra 8127189 8127765 -20876891 - TAHRE LINE telomeric -9597 866 287 8 647 7340 2 24 0 chrUextra 8127865 8128664 -20875992 + Gypsy6_I LTR Gypsy 3181 3998 -3014 8 647 3514 172 31 25 chrUextra 8128767 8129550 -20875106 + SAR_DM Satellite Satellite 332 1118 -354 8 647 381 172 10 31 chrUextra 8129464 8129560 -20875096 - XDMR_DM Unknown Unknown 0 360 267 8 647 968 0 0 0 chrUextra 8130562 8130671 -20873985 - Stalker2_LTR LTR Gypsy -315 109 1 8 647 5564 12 1 3 chrUextra 8130671 8131361 -20873295 - Stalker2_I LTR Gypsy 0 7402 6714 8 647 368 241 35 35 chrUextra 8131802 8131918 -20872738 + Gypsy5_I LTR Gypsy 4298 4413 -2096 8 647 645 139 49 11 chrUextra 8131918 8132202 -20872454 + GA-rich Low_complexity Low_complexity 1 295 0 8 647 252 0 0 0 chrUextra 8133739 8133767 -20870889 + (CAA)n Simple_repeat Simple_repeat 2 29 0 8 647 203 202 19 66 chrUextra 8134463 8134569 -20870087 + (TTTAG)n Simple_repeat Simple_repeat 3 103 0 8 647 210 259 33 26 chrUextra 8134597 8134748 -20869908 + (TTTAG)n Simple_repeat Simple_repeat 3 154 0 8 647 210 259 33 26 chrUextra 8134776 8134927 -20869729 + (TTTAG)n Simple_repeat Simple_repeat 3 154 0 8 647 3281 199 16 20 chrUextra 8135062 8135856 -20868800 - SAR_DM Satellite Satellite -255 1217 427 8 647 2400 65 2 20 chrUextra 8135956 8136284 -20868372 + STALKER4_LTR LTR Gypsy 85 392 -10 8 647 2419 91 7 48 chrUextra 8136277 8136740 -20867916 - DMSAT6 Satellite Satellite -22 448 5 8 647 1199 49 0 0 chrUextra 8137237 8137380 -20867276 - CIRCE LINE Composite -1376 4980 4838 8 647 1014 52 7 0 chrUextra 8137376 8137504 -20867152 - CIRCE LINE Composite -1735 4621 4493 8 647 1085 60 0 0 chrUextra 8137504 8137654 -20867002 - S_DM DNA Tc1 0 1736 1587 8 647 2503 101 16 41 chrUextra 8137754 8138553 -20866103 - DMSAT6 Satellite Satellite -140 778 1 8 647 5058 81 3 30 chrUextra 8139604 8140351 -20864305 + STALKER4_I LTR Gypsy 17 743 -5787 8 647 1876 102 8 52 chrUextra 8140451 8140870 -20863786 - DOC2_DM LINE Jockey -4310 483 6 8 647 1863 159 16 8 chrUextra 8140883 8141250 -20863406 + SAR_DM Satellite Satellite 380 749 -723 8 647 2669 83 20 13 chrUextra 8141350 8142149 -20862507 + DMSAT6 Satellite Satellite 1 805 -3 8 647 6232 52 1 10 chrUextra 8142249 8143048 -20861608 - R1_DM LINE R1 -4402 954 163 8 647 31 26 0 0 chrUextra 8143853 8143891 -20860765 + AT_rich Low_complexity Low_complexity 1 38 0 8 647 7121 1 2 0 chrUextra 8144047 8144846 -20859810 + DM176_I LTR Gypsy 1485 2285 -4135 8 647 1581 28 0 0 chrUextra 8146030 8146284 -20858372 + (CAAGA)n Simple_repeat Simple_repeat 1 254 0 8 647 3675 169 29 18 chrUextra 8146744 8147543 -20857113 - SAR_DM Satellite Satellite -453 1019 212 8 647 1593 0 0 0 chrUextra 8147643 8147820 -20856836 + (GAGAA)n Simple_repeat Simple_repeat 2 178 0 8 647 3118 108 39 101 chrUextra 8148542 8149208 -20855448 - PROTOP_B DNA P -109 1044 420 8 647 1173 15 0 8 chrUextra 8149208 8149341 -20855315 - PROTOP_B DNA P 0 1153 1025 8 647 936 9 0 27 chrUextra 8149447 8149559 -20855097 + NTS_DM Other Other 25 133 -107 8 647 1640 5 20 15 chrUextra 8149559 8149761 -20854895 + NTS_DM Other Other 38 240 0 8 647 1401 6 0 18 chrUextra 8149761 8149926 -20854730 + NTS_DM Other Other 1 162 -78 8 647 521 131 36 0 chrUextra 8150036 8150120 -20854536 + NTS_DM Other Other 4 90 -150 8 647 3652 177 13 13 chrUextra 8151250 8152034 -20852622 - SAR_DM Satellite Satellite -396 1076 293 8 647 6829 5 19 14 chrUextra 8153037 8153836 -20850820 + MDG1_I LTR Gypsy 319 1121 -5475 8 647 6089 60 0 6 chrUextra 8153936 8154735 -20849921 - BATUMI_I LTR Pao -1162 6752 5716 8 647 3514 186 29 11 chrUextra 8154836 8155630 -20849026 + SAR_DM Satellite Satellite 352 1159 -313 8 647 2513 92 10 34 chrUextra 8155738 8156322 -20848334 - DMSAT6 Satellite Satellite -82 570 1 8 647 1744 254 2 104 chrUextra 8156349 8156867 -20847789 - DMSAT6 Satellite Satellite 0 470 6 8 647 2466 103 11 20 chrUextra 8156888 8157432 -20847224 - DMSAT6 Satellite Satellite 0 538 1 8 647 6815 14 15 8 chrUextra 8157532 8158331 -20846325 + DOC2_DM LINE Jockey 1874 2678 -2115 8 647 510 0 0 0 chrUextra 8159175 8159230 -20845426 - PROTOP_B DNA P 0 1153 1099 8 647 6923 6 1 3 chrUextra 8159330 8160107 -20844549 - DM176_I LTR Gypsy -5110 1310 535 8 647 22 0 0 0 chrUextra 8160107 8160129 -20844527 + AT_rich Low_complexity Low_complexity 1 22 0 8 647 2350 4 4 0 chrUextra 8160229 8160487 -20844169 - MDG3_I LTR Gypsy -4727 259 1 8 647 2261 23 8 0 chrUextra 8160486 8160751 -20843905 - MDG3_LTR LTR Gypsy 0 267 1 8 647 6231 15 134 0 chrUextra 8161128 8161927 -20842729 + IDEFIX_I LTR Gypsy 4483 5388 -240 8 647 2602 86 25 19 chrUextra 8162027 8162826 -20841830 - DMSAT6 Satellite Satellite -127 804 1 8 647 3508 171 24 29 chrUextra 8162928 8163725 -20840931 - SAR_DM Satellite Satellite -300 1172 380 8 647 5764 100 39 0 chrUextra 8163825 8164624 -20840032 - Gypsy12_I LTR Gypsy -1959 3587 2758 8 647 6432 46 0 14 chrUextra 8164724 8165523 -20839133 - STALKER4_I LTR Gypsy -2475 4055 3268 8 647 6354 48 8 0 chrUextra 8166522 8167319 -20837337 - IDEFIX_I LTR Gypsy -4298 1330 528 8 647 5094 51 4 11 chrUextra 8167421 8168220 -20836436 - BATUMI_I LTR Pao -5170 2744 1953 8 647 6591 6 13 1 chrUextra 8168323 8169119 -20835537 + G_DM LINE Jockey 1 805 -3541 8 647 5880 23 0 0 chrUextra 8169219 8169928 -20834728 - FW_DM LINE Jockey -3631 1061 353 8 647 740 11 0 0 chrUextra 8169927 8170017 -20834639 + R1_DM LINE R1 2973 3062 -2294 8 647 4944 111 0 39 chrUextra 8170120 8170914 -20833742 + Gypsy3_I LTR Gypsy 1521 2283 -3894 8 647 906 100 0 16 chrUextra 8171020 8171203 -20833453 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 8 647 1049 82 0 6 chrUextra 8171212 8171384 -20833272 + (CTTAT)n Simple_repeat Simple_repeat 4 174 0 8 647 305 131 0 28 chrUextra 8171388 8171415 -20833241 + polypyrimidine Low_complexity Low_complexity 47 73 0 8 647 1290 56 0 0 chrUextra 8171415 8171771 -20832885 + (CTTAT)n Simple_repeat Simple_repeat 1 356 0 8 647 305 131 0 28 chrUextra 8171771 8171813 -20832843 + polypyrimidine Low_complexity Low_complexity 6 46 0 8 647 6713 4 0 1 chrUextra 8171916 8172711 -20831945 - ROO_I LTR Pao -925 7331 6538 8 647 2527 13 0 0 chrUextra 8172811 8173111 -20831545 - STALKER4_LTR LTR Gypsy -102 300 1 8 647 3775 12 12 2 chrUextra 8173111 8173609 -20831047 - STALKER4_I LTR Gypsy 0 6530 6028 8 647 724 144 36 7 chrUextra 8173720 8173860 -20830796 - Gypsy12_LTR LTR Gypsy -962 1374 1231 8 647 1500 205 133 27 chrUextra 8173859 8174479 -20830177 - Gypsy12_LTR LTR Gypsy -566 1714 1050 8 647 478 63 0 0 chrUextra 8174609 8174672 -20829984 - Baggins1 LINE LOA -600 4853 4791 8 647 4201 58 14 12 chrUextra 8174828 8175405 -20829251 - R1_DM LINE R1 -3113 2243 1666 8 647 1178 132 3 172 chrUextra 8175757 8176059 -20828597 + HOBO DNA hAT 23 273 -2743 8 647 944 120 280 4 chrUextra 8176064 8176303 -20828353 + PROTOP_B DNA P 33 337 -816 8 647 6351 0 1 0 chrUextra 8176403 8177126 -20827530 + LSU-rRNA_Dme rRNA rRNA 3177 3900 0 8 647 6173 26 0 5 chrUextra 8177301 8178099 -20826557 - ROO_I LTR Pao -60 8196 7403 8 647 6737 15 0 0 chrUextra 8178199 8178995 -20825661 + Gypsy4_I LTR Gypsy 3622 4417 -1871 8 647 1850 36 43 8 chrUextra 8179097 8179351 -20825305 - TRANSIB2 DNA Transib -1555 1289 1027 8 647 2118 49 0 3 chrUextra 8179379 8179665 -20824991 - TRANSIB2 DNA Transib -2222 622 338 8 647 1181 40 0 26 chrUextra 8179670 8179825 -20824831 - MICROPIA_I LTR Gypsy -1157 3319 3169 8 647 422 118 0 0 chrUextra 8179827 8179895 -20824761 + Gypsy8_LTR LTR Gypsy 1 68 -236 8 647 342 326 14 14 chrUextra 8180023 8180166 -20824490 + Gypsy3_I LTR Gypsy 6032 6174 -3 8 647 1701 111 16 60 chrUextra 8180169 8180485 -20824171 + Gypsy6A_LTR LTR Gypsy 1 302 -118 8 647 34 24 0 0 chrUextra 8180713 8180754 -20823902 + AT_rich Low_complexity Low_complexity 1 41 0 8 647 6278 11 2 16 chrUextra 8180893 8181691 -20822965 + ROO_I LTR Pao 647 1433 -6823 8 647 2361 116 6 38 chrUextra 8181791 8182589 -20822067 - DMSAT6 Satellite Satellite -124 773 1 8 647 1501 17 0 0 chrUextra 8182689 8182867 -20821789 - DIVER2_I LTR Pao -227 3920 3743 8 647 1526 29 0 99 chrUextra 8182865 8183098 -20821558 - DIVER2_I LTR Pao -2572 1575 1366 8 647 23 0 0 0 chrUextra 8183242 8183265 -20821391 + AT_rich Low_complexity Low_complexity 1 23 0 8 647 3217 177 13 19 chrUextra 8183589 8184374 -20820282 - SAR_DM Satellite Satellite -361 1111 332 8 647 5772 60 0 0 chrUextra 8184485 8185283 -20819373 + IDEFIX_I LTR Gypsy 3596 4393 -1235 8 647 266 226 42 21 chrUextra 8185783 8185878 -20818778 + (CAA)n Simple_repeat Simple_repeat 1 97 0 8 647 254 227 11 0 chrUextra 8185958 8186046 -20818610 + ROO_I LTR Pao 660 748 -7508 8 647 3389 22 3 21 chrUextra 8186281 8187002 -20817654 - Gypsy2_I LTR Gypsy -5312 823 1 8 647 600 26 26 0 chrUextra 8187002 8187078 -20817578 - Gypsy2_LTR LTR Gypsy 0 353 276 8 647 3294 181 15 19 chrUextra 8187182 8187977 -20816679 - SAR_DM Satellite Satellite -425 1047 256 8 647 6394 38 1 0 chrUextra 8188077 8188875 -20815781 - R1_DM LINE R1 -211 5145 4347 8 647 3362 180 8 14 chrUextra 8188975 8189770 -20814886 + SAR_DM Satellite Satellite 248 1037 -435 8 647 22 35 0 0 chrUextra 8190214 8190243 -20814413 + AT_rich Low_complexity Low_complexity 1 29 0 8 647 6146 24 33 0 chrUextra 8190771 8191567 -20813089 - PROTOP_A DNA P -283 822 1 8 647 3082 192 14 24 chrUextra 8191670 8192467 -20812189 + SAR_DM Satellite Satellite 429 1217 -255 8 647 2531 80 30 21 chrUextra 8192567 8193365 -20811291 - DMSAT6 Satellite Satellite -96 805 1 8 647 3246 170 18 24 chrUextra 8193465 8194259 -20810397 - SAR_DM Satellite Satellite -315 1157 369 8 647 2472 211 25 67 chrUextra 8194364 8195157 -20809499 - TART_B1 LINE telomeric -9067 1587 828 8 647 2948 196 11 15 chrUextra 8195262 8196059 -20808597 - SAR_DM Satellite Satellite -587 793 1 8 647 3091 90 58 40 chrUextra 8196159 8196957 -20807699 + PROTOP_A DNA P 324 1105 -48 8 647 4199 6 0 0 chrUextra 8197057 8197544 -20807112 + DMRT1B LINE R1 4697 5183 0 8 647 2429 17 23 13 chrUextra 8197552 8197855 -20806801 - R1_DM LINE R1 -760 4596 4291 8 647 497 126 0 11 chrUextra 8197974 8198062 -20806594 - G3_DM LINE Jockey -4416 189 103 8 647 3300 177 21 18 chrUextra 8198853 8199631 -20805025 + SAR_DM Satellite Satellite 380 1159 -313 8 647 459 234 0 14 chrUextra 8199508 8199651 -20805005 - XDMR_DM Unknown Unknown 0 360 220 8 647 398 326 41 26 chrUextra 8200044 8200549 -20804107 - ZAM_I LTR Gypsy -1838 5652 5392 8 647 966 160 37 61 chrUextra 8200739 8201398 -20803258 - DNAREP1_DM LINE Penelope -262 332 79 8 647 319 137 14 14 chrUextra 8201373 8201447 -20803209 - DNAREP1_DM LINE Penelope -275 319 246 8 647 4896 40 100 19 chrUextra 8201552 8202345 -20802311 + BATUMI_I LTR Pao 1190 2046 -5917 8 647 935 190 102 0 chrUextra 8202481 8202707 -20801949 + FW_DM LINE Jockey 1437 1685 -3007 8 647 584 53 0 0 chrUextra 8202722 8202797 -20801859 + FW_DM LINE Jockey 1898 1972 -2720 8 647 887 172 32 11 chrUextra 8202795 8202983 -20801673 + FW_DM LINE Jockey 2403 2594 -2098 8 647 1528 130 0 4 chrUextra 8202988 8203243 -20801413 + FW_DM LINE Jockey 3399 3652 -1040 8 647 4493 11 64 0 chrUextra 8203343 8204141 -20800515 + DOC LINE Jockey 1393 2241 -2484 8 647 36 55 0 52 chrUextra 8204272 8204388 -20800268 + AT_rich Low_complexity Low_complexity 1 110 0 8 647 3039 3 0 0 chrUextra 8204682 8205039 -20799617 + NOMAD_LTR LTR Gypsy 1 357 -161 8 647 628 70 0 0 chrUextra 8205139 8205225 -20799431 + Baggins1 LINE LOA 4942 5027 -426 8 647 2622 75 87 10 chrUextra 8206037 8206835 -20797821 + DMSAT6 Satellite Satellite 1 859 -21 8 647 230 281 11 11 chrUextra 8207215 8207305 -20797351 - BLASTOPIA_I LTR Gypsy -1746 2735 2646 8 647 5409 63 34 4 chrUextra 8207833 8208631 -20796025 + IDEFIX_I LTR Gypsy 2951 3772 -1856 8 647 6461 30 0 0 chrUextra 8208731 8209529 -20795127 + R1_DM LINE R1 2384 3181 -2175 8 647 762 40 0 0 chrUextra 8209629 8209728 -20794928 + ARS406_DM Unknown Unknown 91 189 -164 8 647 3028 178 15 11 chrUextra 8209639 8210426 -20794230 - SAR_DM Satellite Satellite -218 1254 195 8 647 449 29 229 0 chrUextra 8210527 8210597 -20794059 - PROTOP_B DNA P -1067 86 1 8 647 23 0 0 0 chrUextra 8211275 8211298 -20793358 + AT_rich Low_complexity Low_complexity 1 23 0 8 647 2305 122 15 6 chrUextra 8211425 8212219 -20792437 - DMSAT6 Satellite Satellite -112 801 1 8 647 339 292 0 0 chrUextra 8212588 8212694 -20791962 + Copia2_I LTR Copia 567 672 -3490 8 647 1742 13 82 0 chrUextra 8213221 8213453 -20791203 - IDEFIX_LTR LTR Gypsy -343 251 1 8 647 241 105 0 0 chrUextra 8213421 8213459 -20791197 + BARI1 DNA Tc1 3 40 -1710 8 647 24 0 0 0 chrUextra 8213603 8213627 -20791029 + AT_rich Low_complexity Low_complexity 1 24 0 8 647 291 232 0 0 chrUextra 8213857 8213926 -20790730 - BS2 LINE Jockey -507 4214 4146 8 647 317 281 104 86 chrUextra 8214184 8214464 -20790192 + Invader1_LTR LTR Gypsy 84 368 -55 8 647 3024 191 15 23 chrUextra 8215017 8215814 -20788842 + SAR_DM Satellite Satellite 421 1211 -261 8 647 914 53 2 17 chrUextra 8215915 8216705 -20787951 - RSP Satellite Satellite -30 778 1 8 647 201 121 0 0 chrUextra 8217137 8217170 -20787486 + (TC)n Simple_repeat Simple_repeat 1 33 0 8 647 3837 15 96 0 chrUextra 8217714 8218509 -20786147 + DOC LINE Jockey 2030 2900 -1825 8 647 978 171 15 29 chrUextra 8218609 8218814 -20785842 - Gypsy12_LTR LTR Gypsy -2134 202 1 8 647 4229 78 32 2 chrUextra 8218814 8219404 -20785252 - Gypsy12_I LTR Gypsy 0 5546 4939 8 647 461 15 76 15 chrUextra 8219506 8219572 -20785084 + ARS406_DM Unknown Unknown 120 189 -164 8 647 2884 190 28 23 chrUextra 8219527 8220303 -20784353 - SAR_DM Satellite Satellite -255 1217 438 8 647 1098 7 7 0 chrUextra 8220403 8220538 -20784118 + ROO_I LTR Pao 8121 8256 0 8 647 3742 2 0 0 chrUextra 8220538 8220966 -20783690 + ROO_LTR LTR Pao 1 428 0 8 647 2008 0 0 0 chrUextra 8220966 8221200 -20783456 - ROO_I LTR Pao -2042 6214 5981 8 647 5714 23 37 0 chrUextra 8221303 8222012 -20782644 + DMCR1A LINE CR1 3736 4470 0 8 647 381 103 0 14 chrUextra 8222013 8222082 -20782574 + I_DM LINE I 5145 5212 -1019 8 647 1759 305 71 14 chrUextra 8222203 8222990 -20781666 - Gypsy5_I LTR Gypsy -3198 3311 2480 8 647 5611 21 0 0 chrUextra 8223094 8223753 -20780903 + PROTOP DNA P 3822 4480 0 8 647 661 156 0 0 chrUextra 8223753 8223891 -20780765 - TART_B1 LINE telomeric -9022 1632 1495 8 647 2541 288 2 6 chrUextra 8223994 8224787 -20779869 - G2_DM LINE Jockey -1331 1771 982 8 647 4613 17 0 4 chrUextra 8224888 8225419 -20779237 - G2_DM LINE Jockey -920 2182 1654 8 647 2158 15 0 0 chrUextra 8225422 8225685 -20778971 - PROTOP DNA P -329 4151 3889 8 647 4819 22 67 8 chrUextra 8225785 8226582 -20778074 + FW_DM LINE Jockey 3497 4340 -352 8 647 401 74 0 0 chrUextra 8226682 8226736 -20777920 + ARS406_DM Unknown Unknown 132 185 -168 8 647 3254 195 21 11 chrUextra 8226690 8227479 -20777177 - SAR_DM Satellite Satellite -255 1217 421 8 647 1265 199 84 16 chrUextra 8227616 8228375 -20776281 + SAR_DM Satellite Satellite 1 810 -680 8 647 278 87 0 21 chrUextra 8228484 8228531 -20776125 - Gypsy12A_LTR LTR Gypsy -725 1555 1510 8 647 213 65 0 0 chrUextra 8228531 8228562 -20776094 + (TATAA)n Simple_repeat Simple_repeat 3 33 0 8 647 1394 171 50 75 chrUextra 8228577 8228993 -20775663 - Gypsy12A_LTR LTR Gypsy -866 1414 1009 8 647 721 274 11 7 chrUextra 8229373 8229659 -20774997 - DM297_I LTR Gypsy -4371 1796 1458 8 647 642 252 19 19 chrUextra 8230322 8230526 -20774130 + Gypsy6_I LTR Gypsy 5161 5318 -1694 8 647 6924 8 1 4 chrUextra 8231168 8231964 -20772692 - LSU-rRNA_Dme rRNA rRNA -2535 1365 572 8 647 2125 174 5 7 chrUextra 8232067 8232490 -20772166 - SAR_DM Satellite Satellite -425 1047 626 8 647 1494 123 163 0 chrUextra 8232490 8232766 -20771890 - MAX_LTR LTR Pao 0 321 1 8 647 612 89 0 0 chrUextra 8232771 8232861 -20771795 - MAX_I LTR Pao -2 7912 7823 8 647 1729 33 5 0 chrUextra 8232979 8233193 -20771463 + PROTOP DNA P 4164 4378 -102 8 647 21 57 0 0 chrUextra 8233409 8233444 -20771212 + AT_rich Low_complexity Low_complexity 1 35 0 8 647 21 89 0 0 chrUextra 8233482 8233538 -20771118 + AT_rich Low_complexity Low_complexity 1 56 0 8 647 7085 1 0 0 chrUextra 8233858 8234655 -20770001 - QUASIMODO_I LTR Gypsy -3550 2510 1714 8 647 6570 34 1 2 chrUextra 8236549 8237346 -20767310 + NINJA_I LTR Pao 5208 6003 -8 8 647 1896 179 49 77 chrUextra 8237446 8238243 -20766413 + HETA LINE telomeric 6 677 -5404 8 647 6310 38 72 0 chrUextra 8238343 8239140 -20765516 - R1_DM LINE R1 -2398 2958 2105 8 647 288 29 0 0 chrUextra 8239240 8239275 -20765381 + Baggins1 LINE LOA 5217 5251 -202 8 647 569 81 0 0 chrUextra 8239382 8239456 -20765200 + Baggins1 LINE LOA 4791 4864 -589 8 647 1805 76 0 4 chrUextra 8239453 8239703 -20764953 - HOBO DNA hAT -2438 578 330 8 647 1981 83 190 20 chrUextra 8239680 8240032 -20764624 - PROTOP DNA P -4000 480 67 8 647 2711 97 16 30 chrUextra 8240137 8240928 -20763728 - DMSAT6 Satellite Satellite -31 779 1 8 647 1807 328 18 6 chrUextra 8241053 8241829 -20762827 + MICROPIA_I LTR Gypsy 955 1739 -2737 8 647 714 331 12 9 chrUextra 8242282 8242676 -20761980 - GTWIN_I LTR Gypsy -2883 3538 3147 8 647 3351 191 14 20 chrUextra 8242828 8243617 -20761039 + SAR_DM Satellite Satellite 389 1172 -300 8 647 4840 31 0 21 chrUextra 8243902 8244522 -20760134 - CIRCE LINE Composite -1376 4980 4374 8 647 7270 0 0 0 chrUextra 8244622 8245419 -20759237 + FW_DM LINE Jockey 3531 4327 -365 8 647 4523 48 5 12 chrUextra 8245519 8246316 -20758340 + PROTOP DNA P 201 853 -252 8 647 661 205 12 49 chrUextra 8246589 8246753 -20757903 + HETRP_DM Satellite Satellite 1518 1675 -197 8 647 702 186 14 14 chrUextra 8246911 8247058 -20757598 + HETRP_DM Satellite Satellite 1529 1675 -197 8 647 207 69 0 0 chrUextra 8247184 8247213 -20757443 + (GA)n Simple_repeat Simple_repeat 2 30 0 8 647 180 0 0 0 chrUextra 8247777 8247797 -20756859 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 8 647 1066 209 14 14 chrUextra 8247829 8248110 -20756546 - XDMR Unknown Unknown 0 361 81 8 647 2144 176 36 7 chrUextra 8248210 8249006 -20755650 + SAR_DM Satellite Satellite 1 818 -677 8 647 3437 184 11 12 chrUextra 8249114 8249879 -20754777 - SAR_DM Satellite Satellite -514 958 195 8 647 736 119 0 0 chrUextra 8249786 8249904 -20754752 + ARS406_DM Unknown Unknown 1 118 -235 8 647 3359 189 15 19 chrUextra 8250004 8250801 -20753855 + SAR_DM Satellite Satellite 418 1211 -261 8 647 6964 8 0 0 chrUextra 8250901 8251698 -20752958 - DM297_I LTR Gypsy -2364 3803 3007 8 647 1390 304 29 31 chrUextra 8251837 8252529 -20752127 - Copia2_I LTR Copia -127 4035 3205 8 647 7046 1 2 0 chrUextra 8252695 8253492 -20751164 + DOC LINE Jockey 731 1529 -3196 8 647 4565 23 64 5 chrUextra 8253812 8254389 -20750267 + PROTOP_A DNA P 1 611 -494 8 647 3351 183 31 22 chrUextra 8254492 8255286 -20749370 + SAR_DM Satellite Satellite 1 801 -396 8 647 2198 0 4 4 chrUextra 8255386 8255634 -20749022 + BEL_I LTR Pao 5157 5404 0 8 647 3223 0 11 0 chrUextra 8255634 8255991 -20748665 + BEL_LTR LTR Pao 1 361 0 8 647 1478 31 26 0 chrUextra 8255991 8256183 -20748473 - QUASIMODO_I LTR Gypsy -951 5109 4913 8 80 5769 103 6 0 chrUextra 8257180 8257977 -20746679 - Gypsy12_I LTR Gypsy -1114 4432 3631 8 648 2532 118 54 15 chrUextra 8258077 8258874 -20745782 + DMSAT6 Satellite Satellite 1 828 -97 8 648 1639 271 7 7 chrUextra 8260126 8260668 -20743988 - Copia_I LTR Copia -2314 2279 1738 8 648 2816 188 40 15 chrUextra 8260773 8261564 -20743092 - SAR_DM Satellite Satellite -216 1256 195 8 648 329 176 42 92 chrUextra 8261689 8261808 -20742848 - Copia_I LTR Copia -80 4513 4401 8 648 22 56 0 0 chrUextra 8261853 8261889 -20742767 + AT_rich Low_complexity Low_complexity 1 36 0 8 648 2002 188 36 7 chrUextra 8262043 8262461 -20742195 + HETA LINE telomeric 4020 4449 -1632 8 648 2677 3 0 0 chrUextra 8262562 8262863 -20741793 - NOMAD_LTR LTR Gypsy -217 301 1 8 648 4286 4 0 0 chrUextra 8263459 8263937 -20740719 - DMRT1B LINE R1 -1762 3421 2944 8 648 2872 0 3 0 chrUextra 8263936 8264256 -20740400 - DMRT1B LINE R1 -2686 2497 2177 8 648 2243 175 16 13 chrUextra 8264356 8265153 -20739503 - SAR_DM Satellite Satellite -504 800 1 8 648 24 0 0 0 chrUextra 8266766 8266790 -20737866 + AT_rich Low_complexity Low_complexity 1 24 0 8 648 7171 2 0 0 chrUextra 8267047 8267843 -20736813 + R1_DM LINE R1 1439 2234 -3122 8 648 260 182 18 0 chrUextra 8267944 8267999 -20736657 - ARS406_DM Unknown Unknown -297 56 1 8 648 3333 189 32 8 chrUextra 8267951 8268739 -20735917 + SAR_DM Satellite Satellite 238 1044 -428 8 648 2089 8 0 0 chrUextra 8268839 8269074 -20735582 + DM297_I LTR Gypsy 566 800 -5367 8 648 4986 3 0 2 chrUextra 8269069 8269635 -20735021 + DM297_I LTR Gypsy 4745 5309 -858 8 648 2641 175 14 10 chrUextra 8269737 8270529 -20734127 - SAR_DM Satellite Satellite -435 795 1 8 648 413 117 0 0 chrUextra 8270830 8270890 -20733766 + FB4_DM DNA Tc1 1018 1077 -3012 8 648 908 128 5 11 chrUextra 8270915 8271104 -20733552 - S_DM DNA Tc1 0 1736 1549 8 648 22 56 0 0 chrUextra 8271215 8271251 -20733405 + AT_rich Low_complexity Low_complexity 1 36 0 8 648 6560 12 21 0 chrUextra 8271527 8271757 -20732899 + STALKER4_I LTR Gypsy 5083 5312 -1218 8 648 183 80 0 0 chrUextra 8271757 8271782 -20732874 + (CATA)n Simple_repeat Simple_repeat 4 28 0 8 648 6560 12 21 0 chrUextra 8271782 8272323 -20732333 + STALKER4_I LTR Gypsy 5313 5868 -662 8 648 2605 79 14 21 chrUextra 8272425 8273219 -20731437 - DMSAT6 Satellite Satellite -39 787 1 8 648 7000 13 0 0 chrUextra 8273319 8274115 -20730541 + FW_DM LINE Jockey 1495 2290 -2402 8 648 1647 70 137 22 chrUextra 8274215 8274493 -20730163 - IDEFIX_I LTR Gypsy -2022 3606 3297 8 648 1203 78 0 18 chrUextra 8274505 8274675 -20729981 - IDEFIX_I LTR Gypsy -2758 2870 2704 8 648 2746 33 3 0 chrUextra 8274674 8275010 -20729646 - IDEFIX_I LTR Gypsy -3030 2598 2262 8 648 6885 16 19 0 chrUextra 8276007 8276801 -20727855 - Gypsy4_I LTR Gypsy -3327 2961 2153 8 648 7040 1 0 0 chrUextra 8276903 8277699 -20726957 - QUASIMODO_I LTR Gypsy -3597 2463 1668 8 648 3389 100 87 20 chrUextra 8277799 8278434 -20726222 + PROTOP_B DNA P 477 1153 0 8 648 3354 173 16 9 chrUextra 8278695 8279458 -20725198 - SAR_DM Satellite Satellite -459 1013 246 8 648 476 577 0 0 chrUextra 8279418 8279607 -20725049 + ARS406_DM Unknown Unknown 1 189 -164 8 648 6743 2 1 4 chrUextra 8279591 8280387 -20724269 - LSU-rRNA_Dme rRNA rRNA -2484 1416 623 8 648 4103 51 66 0 chrUextra 8280490 8281280 -20723376 - DMCR1A LINE CR1 -920 3550 2709 8 648 276 281 104 86 chrUextra 8281657 8281937 -20722719 - Invader1_LTR LTR Gypsy -55 368 84 8 648 4426 121 64 1 chrUextra 8282279 8283071 -20721585 + IDEFIX_I LTR Gypsy 3360 4201 -1427 8 648 510 16 0 0 chrUextra 8283175 8283236 -20721420 + ARS406_DM Unknown Unknown 129 189 -164 8 648 3057 188 18 19 chrUextra 8283186 8283971 -20720685 - SAR_DM Satellite Satellite -255 1217 434 8 648 21 89 0 0 chrUextra 8284776 8284832 -20719824 + AT_rich Low_complexity Low_complexity 1 56 0 8 648 213 65 0 0 chrUextra 8284968 8284999 -20719657 + (TAA)n Simple_repeat Simple_repeat 2 32 0 8 648 1843 105 10 3 chrUextra 8285011 8285299 -20719357 + MDG1_LTR LTR Gypsy 123 412 -30 8 648 2598 33 30 102 chrUextra 8285300 8285739 -20718917 + DMCR1A LINE CR1 1 407 -4063 8 648 3127 186 33 27 chrUextra 8285863 8286659 -20717997 - SAR_DM Satellite Satellite -542 800 1 8 648 1855 162 50 13 chrUextra 8286759 8287237 -20717419 + DOC4_DM LINE Jockey 2532 2791 0 8 648 833 87 113 7 chrUextra 8287403 8287553 -20717103 + G3_DM LINE Jockey 82 247 -4358 8 648 2462 121 12 25 chrUextra 8287655 8288450 -20716206 + DMSAT6 Satellite Satellite 1 785 -74 8 648 296 23 0 0 chrUextra 8289303 8289347 -20715309 + TART LINE telomeric 9210 9253 -5224 8 648 3668 5 0 0 chrUextra 8289447 8289869 -20714787 - ROO_LTR LTR Pao -6 422 1 8 648 4914 104 1 0 chrUextra 8290344 8291138 -20713518 - TART_B1 LINE telomeric -8841 1813 1019 8 648 3347 183 9 10 chrUextra 8291245 8292035 -20712621 + SAR_DM Satellite Satellite 195 983 -489 8 648 6902 4 2 0 chrUextra 8292135 8292931 -20711725 + LINEJ1_DM LINE Jockey 2991 3788 -1232 8 648 3691 172 8 9 chrUextra 8293036 8293827 -20710829 - SAR_DM Satellite Satellite -425 1047 258 8 648 2167 23 4 0 chrUextra 8293927 8294191 -20710465 - CIRCE LINE Composite -6091 265 1 8 648 4323 26 17 0 chrUextra 8294191 8294723 -20709933 - CIRCE LINE Composite 0 6356 5816 8 648 2914 199 21 25 chrUextra 8294823 8295619 -20709037 + SAR_DM Satellite Satellite 416 1208 -264 8 648 3711 14 0 0 chrUextra 8295719 8296155 -20708501 - Copia2_I LTR Copia -201 3961 3526 8 648 277 51 0 0 chrUextra 8296476 8296515 -20708141 - Copia2_LTR_DM LTR Copia 0 198 160 8 648 3022 212 19 14 chrUextra 8296615 8297405 -20707251 + TABOR_I LTR Gypsy 4351 5144 -1192 8 648 2333 150 108 21 chrUextra 8297691 8298307 -20706349 + TART LINE telomeric 8952 9568 -4909 8 648 247 248 76 76 chrUextra 8298494 8298599 -20706057 - MICROPIA_I LTR Gypsy -4371 105 1 8 648 1241 133 0 55 chrUextra 8298918 8299173 -20705483 - TAHRE LINE telomeric -9832 631 391 8 648 2876 192 8 11 chrUextra 8299303 8300098 -20704558 + SAR_DM Satellite Satellite 195 1256 -216 8 648 6768 10 0 1 chrUextra 8300199 8300995 -20703661 + DOC2_DM LINE Jockey 3667 4461 -332 8 648 514 162 0 49 chrUextra 8301095 8301218 -20703438 - ARS406_DM Unknown Unknown -236 117 1 8 648 2973 183 25 17 chrUextra 8301115 8301887 -20702769 + SAR_DM Satellite Satellite 191 968 -504 8 648 6377 19 10 4 chrUextra 8301991 8302787 -20701869 - R1_DM LINE R1 -844 4512 3712 8 648 6469 14 0 1 chrUextra 8302887 8303683 -20700973 + QUASIMODO_I LTR Gypsy 2901 3695 -2365 8 648 6791 1 0 0 chrUextra 8303783 8304579 -20700077 - LSU-rRNA_Dme rRNA rRNA -2649 1251 456 8 648 5359 5 0 0 chrUextra 8304679 8305298 -20699358 + Gypsy4_I LTR Gypsy 5670 6288 0 8 648 1165 30 6 68 chrUextra 8305298 8305475 -20699181 + Gypsy4_LTR LTR Gypsy 1 166 -121 8 648 3818 15 0 0 chrUextra 8305575 8306038 -20698618 + FW_DM LINE Jockey 4230 4692 0 8 648 1137 73 0 0 chrUextra 8306471 8306636 -20698020 - ARS406_DM Unknown Unknown -188 165 1 8 648 3072 187 7 8 chrUextra 8306540 8307267 -20697389 + SAR_DM Satellite Satellite 192 917 -555 8 648 2358 183 55 19 chrUextra 8307372 8308163 -20696493 + SAR_DM Satellite Satellite 1 819 -216 8 648 816 250 0 0 chrUextra 8308270 8308454 -20696202 - Gypsy3_I LTR Gypsy -3377 2800 2617 8 648 4560 17 2 42 chrUextra 8308444 8309059 -20695597 + DOC2_DM LINE Jockey 360 949 -3844 8 648 3875 192 0 4 chrUextra 8309159 8309955 -20694701 - Gypsy5_I LTR Gypsy -4691 1818 1026 8 648 6808 4 0 0 chrUextra 8310055 8310851 -20693805 + R1_DM LINE R1 2707 3502 -1854 8 648 757 147 160 0 chrUextra 8310974 8311130 -20693526 - DOC LINE Jockey -1739 2986 2806 8 648 2574 89 239 39 chrUextra 8311127 8311740 -20692916 - DOC LINE Jockey -2108 2617 1883 8 648 1065 93 0 0 chrUextra 8312198 8312642 -20692014 + (ACATG)n Simple_repeat Simple_repeat 1 444 0 8 648 3233 13 22 4 chrUextra 8312743 8313240 -20691416 - ROO_I LTR Pao -7651 605 1 8 648 2624 3 0 0 chrUextra 8313240 8313539 -20691117 - ROO_LTR LTR Pao 0 428 130 8 648 3367 5 0 0 chrUextra 8313639 8314030 -20690626 - NOMAD_LTR LTR Gypsy -14 504 114 8 648 3565 0 0 0 chrUextra 8314030 8314435 -20690221 - NOMAD_I LTR Gypsy 0 6572 6168 8 648 6645 15 1 0 chrUextra 8314535 8315331 -20689325 - DMRT1B LINE R1 -1621 3562 2766 8 648 3026 174 39 15 chrUextra 8315431 8316227 -20688429 - SAR_DM Satellite Satellite -685 814 1 8 648 364 0 0 22 chrUextra 8316327 8316373 -20688283 - NTS_DM Other Other -158 82 38 8 648 840 9 0 35 chrUextra 8316373 8316486 -20688170 - NTS_DM Other Other -107 133 25 8 648 1252 18 0 6 chrUextra 8316538 8316703 -20687953 - NTS_DM Other Other -39 201 38 8 648 1142 0 0 0 chrUextra 8316703 8316836 -20687820 - NTS_DM Other Other -107 133 1 8 648 1757 0 25 17 chrUextra 8316836 8317074 -20687582 - NTS_DM Other Other 0 240 1 8 648 256 0 82 61 chrUextra 8317074 8317123 -20687533 - NTS_DM Other Other 0 240 191 8 648 4661 20 52 0 chrUextra 8317223 8318019 -20686637 - R1_DM LINE R1 -1666 3690 2854 8 648 5878 25 49 1 chrUextra 8318119 8318874 -20685782 - DOC3_DM LINE Jockey -945 3795 3005 8 648 282 48 24 0 chrUextra 8318873 8318915 -20685741 - DOC3_DM LINE Jockey -1886 2854 2812 8 648 6564 14 33 0 chrUextra 8319015 8319811 -20684845 - Copia2_I LTR Copia -1920 2242 1421 8 648 3373 184 11 11 chrUextra 8319911 8320702 -20683954 + SAR_DM Satellite Satellite 257 1047 -425 8 648 2527 117 21 13 chrUextra 8320807 8321603 -20683053 + DMSAT6 Satellite Satellite 1 802 -245 8 648 3386 175 10 18 chrUextra 8321703 8322498 -20682158 + SAR_DM Satellite Satellite 302 1090 -382 8 648 6648 2 0 0 chrUextra 8322599 8323394 -20681262 + Copia_I LTR Copia 1916 2710 -1883 8 648 6686 0 2 0 chrUextra 8323494 8324289 -20680367 - TABOR_I LTR Gypsy -5131 1205 409 8 648 292 207 97 32 chrUextra 8324394 8324549 -20680107 + (CAAGA)n Simple_repeat Simple_repeat 3 167 0 8 648 364 219 105 0 chrUextra 8324566 8324882 -20679774 + (CAAGA)n Simple_repeat Simple_repeat 1 349 0 8 648 1186 0 7 0 chrUextra 8325285 8325429 -20679227 - BLASTOPIA_I LTR Gypsy -4336 145 1 8 648 2140 15 7 11 chrUextra 8325429 8325705 -20678951 - BLASTOPIA_LTR LTR Gypsy 0 275 1 8 648 808 17 32 24 chrUextra 8325705 8325823 -20678833 + NTS_DM Other Other 122 240 0 8 648 1847 4 17 13 chrUextra 8325823 8326062 -20678594 + NTS_DM Other Other 1 240 0 8 648 3622 170 9 9 chrUextra 8326180 8326971 -20677685 - SAR_DM Satellite Satellite -430 1042 252 8 648 6316 25 35 0 chrUextra 8327074 8327869 -20676787 - FW_DM LINE Jockey -624 4068 3246 8 648 6735 6 0 0 chrUextra 8327969 8328764 -20675892 - R1_DM LINE R1 -1788 3568 2774 8 648 975 24 0 0 chrUextra 8328866 8328992 -20675664 - IDEFIX_LTR LTR Gypsy -468 126 1 8 648 244 125 0 0 chrUextra 8328960 8329000 -20675656 + BARI1 DNA Tc1 3 42 -1708 8 648 270 149 0 0 chrUextra 8329063 8329110 -20675546 + GTWIN_I LTR Gypsy 4931 4977 -1444 8 648 22 0 0 0 chrUextra 8329150 8329172 -20675484 + AT_rich Low_complexity Low_complexity 1 22 0 8 648 205 191 0 0 chrUextra 8329227 8329269 -20675387 + A-rich Low_complexity Low_complexity 1 42 0 8 648 275 260 9 71 chrUextra 8329397 8329509 -20675147 + MDG1_I LTR Gypsy 1358 1462 -5134 8 648 3363 188 8 8 chrUextra 8329761 8330545 -20674111 + SAR_DM Satellite Satellite 259 1042 -430 8 648 2342 113 19 37 chrUextra 8330654 8331449 -20673207 + DMSAT6 Satellite Satellite 1 780 -6 8 648 2559 185 63 23 chrUextra 8331549 8332342 -20672314 - SAR_DM Satellite Satellite -615 824 1 8 648 1940 288 19 14 chrUextra 8332505 8333238 -20671418 - FROGGER_I LTR Copia -547 1530 794 8 648 200 111 28 0 chrUextra 8333339 8333375 -20671281 + (TA)n Simple_repeat Simple_repeat 2 38 0 8 648 2316 8 0 0 chrUextra 8333375 8333641 -20671015 - DMLTR5 LTR Gypsy 0 266 1 8 648 4068 12 0 0 chrUextra 8333641 8334134 -20670522 - HMSBEAGLE_I LTR Gypsy 0 6529 6037 8 648 766 72 9 0 chrUextra 8334237 8334348 -20670308 - R1_DM LINE R1 -5222 134 23 8 648 4891 28 2 3 chrUextra 8334369 8334974 -20669682 - R1_DM LINE R1 0 5356 4753 8 648 340 111 0 0 chrUextra 8334975 8335029 -20669627 + R1_DM LINE R1 409 462 -4894 8 648 5307 62 21 4 chrUextra 8335129 8335874 -20668782 - R1_DM LINE R1 -4598 758 1 8 648 6669 5 15 0 chrUextra 8336024 8336819 -20667837 - DM176_I LTR Gypsy -3412 3008 2202 8 648 1070 128 0 5 chrUextra 8337033 8337230 -20667426 + NTS_DM Other Other 1 196 -44 8 648 1019 147 38 21 chrUextra 8337447 8337683 -20666973 + NTS_DM Other Other 1 240 0 8 648 3906 195 0 1 chrUextra 8337816 8338608 -20666048 - ROVER-I_DM LTR Gypsy -2489 4095 3305 8 648 733 105 229 0 chrUextra 8339092 8339245 -20665411 + FB4_DM DNA Tc1 3 190 -3899 8 648 620 93 41 0 chrUextra 8339238 8339335 -20665321 - Baggins1 LINE LOA -626 4827 4727 8 648 6289 16 1 9 chrUextra 8339604 8340399 -20664257 - QUASIMODO_I LTR Gypsy -4142 1918 1130 8 648 235 0 0 0 chrUextra 8340499 8340528 -20664128 + HOBO DNA hAT 875 903 -2113 8 648 4335 0 0 10 chrUextra 8340529 8341031 -20663625 + HOBO DNA hAT 2520 3016 0 8 648 659 180 13 51 chrUextra 8341435 8341593 -20663063 + HETRP_DM Satellite Satellite 1518 1669 -203 8 648 655 186 7 14 chrUextra 8341756 8341898 -20662758 + HETRP_DM Satellite Satellite 1529 1669 -203 8 648 282 29 0 0 chrUextra 8342029 8342064 -20662592 + (GA)n Simple_repeat Simple_repeat 2 36 0 8 648 502 217 8 8 chrUextra 8342064 8342185 -20662471 + HETRP_DM Satellite Satellite 1549 1669 -203 8 648 728 307 16 16 chrUextra 8342289 8342673 -20661983 + Gypsy4_I LTR Gypsy 2234 2784 -3504 8 648 1510 23 19 0 chrUextra 8342507 8342721 -20661935 + TLD2 Unknown Unknown 1 218 0 8 648 458 340 10 10 chrUextra 8342732 8343031 -20661625 + GTWIN_I LTR Gypsy 3323 3538 -2883 8 648 1376 76 20 0 chrUextra 8343184 8343382 -20661274 + IDEFIX_I LTR Gypsy 4747 4948 -680 8 648 4565 40 16 2 chrUextra 8343373 8343979 -20660677 + IDEFIX_I LTR Gypsy 780 1394 -4234 8 648 2636 188 34 9 chrUextra 8344079 8344874 -20659782 + SAR_DM Satellite Satellite 1 815 -707 8 648 6349 23 4 4 chrUextra 8344974 8345769 -20658887 + R1_DM LINE R1 3249 4043 -1313 8 648 3306 185 18 10 chrUextra 8345869 8346646 -20658010 - SAR_DM Satellite Satellite -443 1029 247 8 648 285 140 18 0 chrUextra 8346607 8346664 -20657992 + ARS406_DM Unknown Unknown 1 58 -295 8 648 1252 18 0 6 chrUextra 8346785 8346950 -20657706 - NTS_DM Other Other -39 201 38 8 648 870 9 0 27 chrUextra 8346950 8347062 -20657594 - NTS_DM Other Other -107 133 25 8 648 1252 18 0 6 chrUextra 8347114 8347279 -20657377 - NTS_DM Other Other -39 201 38 8 648 870 9 0 27 chrUextra 8347279 8347391 -20657265 - NTS_DM Other Other -107 133 25 8 648 22 56 0 0 chrUextra 8347417 8347453 -20657203 + AT_rich Low_complexity Low_complexity 1 36 0 8 648 243 125 0 0 chrUextra 8347466 8347506 -20657150 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 648 3456 176 10 10 chrUextra 8347662 8348454 -20656202 + SAR_DM Satellite Satellite 246 1037 -435 8 648 4393 15 2 0 chrUextra 8348554 8349081 -20655575 - R1_DM LINE R1 -26 5330 4803 8 648 584 42 0 0 chrUextra 8349084 8349156 -20655500 - LSU-rRNA_Dme rRNA rRNA -1251 2649 2578 8 648 1623 15 0 0 chrUextra 8349152 8349349 -20655307 - R2_DM LINE R2 -3 3604 3408 8 648 790 191 83 93 chrUextra 8349449 8349750 -20654906 + TIRANT_LTR LTR Gypsy 12 309 -108 8 648 397 176 11 42 chrUextra 8349904 8349999 -20654657 + TIRANT_I LTR Gypsy 1 92 -7600 8 648 237 312 15 66 chrUextra 8350048 8350185 -20654471 + TIRANT_I LTR Gypsy 581 710 -6982 8 648 4755 37 24 0 chrUextra 8350344 8350963 -20653693 + DOC3_DM LINE Jockey 816 1449 -3291 8 648 946 70 5 18 chrUextra 8351239 8351999 -20652657 + RSP Satellite Satellite 1 750 0 8 648 2723 213 14 21 chrUextra 8352134 8352929 -20651727 + SAR_DM Satellite Satellite 419 1207 -265 8 648 5672 70 10 6 chrUextra 8353031 8353824 -20650832 + R1_DM LINE R1 1348 2143 -3213 8 648 3487 174 13 9 chrUextra 8353927 8354716 -20649940 - SAR_DM Satellite Satellite -435 1037 246 8 648 4952 2 0 0 chrUextra 8354819 8355386 -20649270 + DOC2_DM LINE Jockey 3693 4259 -534 8 648 1553 19 68 0 chrUextra 8355384 8355590 -20649066 + DOC2_DM LINE Jockey 4574 4793 0 8 648 1445 127 84 11 chrUextra 8355714 8356001 -20648655 + Invader1_I LTR Gypsy 2879 3186 0 8 648 1241 135 67 41 chrUextra 8356001 8356271 -20648385 + Invader1_LTR LTR Gypsy 1 277 -146 8 648 2738 25 75 0 chrUextra 8357044 8357404 -20647252 + PROTOP_A DNA P 1 387 -718 8 648 3248 180 13 14 chrUextra 8357504 8358299 -20646357 - SAR_DM Satellite Satellite -467 1005 212 8 648 2360 114 14 21 chrUextra 8358430 8359194 -20645462 + DMSAT6 Satellite Satellite 1 758 0 8 648 6814 13 0 0 chrUextra 8359294 8360089 -20644567 - Gypsy12_I LTR Gypsy -1752 3794 3000 8 648 3160 184 9 13 chrUextra 8360191 8360958 -20643698 - SAR_DM Satellite Satellite -514 958 195 8 648 714 92 8 8 chrUextra 8360864 8360984 -20643672 + ARS406_DM Unknown Unknown 1 120 -233 8 648 4409 2 0 0 chrUextra 8361084 8361612 -20643044 - Copia_I LTR Copia -650 3943 3416 8 648 2239 4 0 0 chrUextra 8361605 8361879 -20642777 - Copia_I LTR Copia -1630 2963 2690 8 648 393 52 17 0 chrUextra 8361979 8362037 -20642619 - ARS406_DM Unknown Unknown -205 148 90 8 648 2957 198 12 19 chrUextra 8362036 8362774 -20641882 + SAR_DM Satellite Satellite 1 732 -216 8 648 2715 19 0 0 chrUextra 8362874 8363197 -20641459 - MICROPIA_I LTR Gypsy -3410 1066 744 8 648 2707 22 110 2 chrUextra 8363188 8363669 -20640987 - MICROPIA_I LTR Gypsy -3841 635 103 8 648 2607 169 9 9 chrUextra 8363790 8364558 -20640098 + SAR_DM Satellite Satellite 1 768 -539 8 648 3203 41 117 2 chrUextra 8364663 8365272 -20639384 - R1_DM LINE R1 -3882 1474 796 8 648 1434 62 0 0 chrUextra 8365262 8365457 -20639199 - R1_DM LINE R1 -4765 591 397 8 648 697 104 0 9 chrUextra 8365557 8365673 -20638983 - ARS406_DM Unknown Unknown -238 115 1 8 648 3246 178 9 21 chrUextra 8365576 8366351 -20638305 + SAR_DM Satellite Satellite 192 957 -515 8 648 1620 24 0 0 chrUextra 8366451 8367072 -20637584 + (GAGAA)n Simple_repeat Simple_repeat 1 621 0 8 648 327 23 0 0 chrUextra 8367345 8367388 -20637268 - ARS406_DM Unknown Unknown -233 120 78 8 648 674 116 0 8 chrUextra 8367377 8367499 -20637157 - ARS406_DM Unknown Unknown -232 121 1 8 648 3001 177 10 11 chrUextra 8367402 8368115 -20636541 + SAR_DM Satellite Satellite 192 903 -569 8 648 794 20 0 0 chrUextra 8368027 8368125 -20636531 - ARS406_DM Unknown Unknown -166 187 90 8 648 533 0 16 0 chrUextra 8368239 8368303 -20636353 - DM176_I LTR Gypsy -6355 65 1 8 648 2005 24 16 0 chrUextra 8368303 8368556 -20636100 - DM176_LTR LTR Gypsy 0 507 251 8 648 2272 14 0 34 chrUextra 8368557 8368850 -20635806 - DM176_LTR LTR Gypsy -224 283 1 8 648 4868 17 137 1 chrUextra 8369133 8369836 -20634820 - DOC2_DM LINE Jockey -2430 2363 1566 8 648 337 111 0 0 chrUextra 8369872 8369926 -20634730 - DMCR1A LINE CR1 0 4470 4417 8 648 5270 112 4 0 chrUextra 8370027 8370816 -20633840 + HMSBEAGLE_I LTR Gypsy 4761 5552 -977 8 648 3029 180 24 32 chrUextra 8370923 8371715 -20632941 - SAR_DM Satellite Satellite -261 1211 426 8 648 1620 40 0 0 chrUextra 8371816 8372139 -20632517 + (CAAGA)n Simple_repeat Simple_repeat 1 323 0 8 648 525 71 0 0 chrUextra 8372139 8372209 -20632447 + (CAAGG)n Simple_repeat Simple_repeat 1 70 0 8 648 1529 6 0 6 chrUextra 8372209 8372388 -20632268 + (CAAGA)n Simple_repeat Simple_repeat 1 178 0 8 648 1920 5 0 0 chrUextra 8372388 8372609 -20632047 + TABOR_LTR LTR Gypsy 1 221 -285 8 648 458 29 0 14 chrUextra 8372709 8372779 -20631877 + TART_B1 LINE telomeric 3584 3652 -7002 8 648 4469 116 26 15 chrUextra 8372776 8373503 -20631153 + TART_B1 LINE telomeric 4297 5031 -5623 8 648 1597 75 89 19 chrUextra 8373603 8373861 -20630795 - Gypsy12_I LTR Gypsy -3908 1638 1363 8 648 2282 113 2 47 chrUextra 8373863 8374397 -20630259 - Gypsy12_I LTR Gypsy -4751 795 231 8 648 3269 31 111 0 chrUextra 8374666 8375116 -20629540 + PROTOP DNA P 1 500 -3980 8 648 1426 34 0 0 chrUextra 8375115 8375291 -20629365 + PROTOP DNA P 111 286 -4194 8 648 3340 169 12 13 chrUextra 8375399 8376167 -20628489 - SAR_DM Satellite Satellite -514 958 192 8 648 708 97 0 9 chrUextra 8376070 8376185 -20628471 + ARS406_DM Unknown Unknown 1 114 -239 8 648 342 85 0 0 chrUextra 8376285 8376332 -20628324 - HMSBEAGLE_I LTR Gypsy -6249 280 234 8 648 1019 97 0 0 chrUextra 8376342 8376486 -20628170 - HMSBEAGLE_I LTR Gypsy -1505 5024 4881 8 648 3991 105 55 0 chrUextra 8376480 8377079 -20627577 - HMSBEAGLE_I LTR Gypsy -1756 4773 4142 8 648 6612 21 0 0 chrUextra 8377179 8377973 -20626683 + R1_DM LINE R1 4046 4839 -517 8 648 507 29 0 0 chrUextra 8378073 8378142 -20626514 + DMCR1A LINE CR1 4402 4470 0 8 648 583 122 0 0 chrUextra 8378150 8378240 -20626416 - Gypsy12_LTR LTR Gypsy -307 2029 1940 8 648 1410 191 178 40 chrUextra 8378239 8378867 -20625789 - Gypsy12_LTR LTR Gypsy -594 1742 1028 8 648 4939 18 25 0 chrUextra 8378967 8379579 -20625077 + R1_DM LINE R1 4440 5066 -290 8 648 924 44 0 0 chrUextra 8379576 8379690 -20624966 + R1_DM LINE R1 5243 5356 0 8 648 295 53 0 0 chrUextra 8379723 8379761 -20624895 + R1_DM LINE R1 1 38 -5318 8 648 6741 0 1 1 chrUextra 8380755 8381549 -20623107 - ROO_I LTR Pao -259 7997 7204 8 648 2561 22 0 0 chrUextra 8382543 8382860 -20621796 + FW_DM LINE Jockey 2927 3243 -1449 8 648 3082 60 1 17 chrUextra 8382860 8383300 -20621356 - STALKER4_LTR LTR Gypsy -10 392 1 8 648 316 0 0 0 chrUextra 8383300 8383337 -20621319 - STALKER4_I LTR Gypsy 0 6530 6494 8 648 437 216 14 21 chrUextra 8383437 8383579 -20621077 + XDMR_DM Unknown Unknown 220 360 0 8 648 3241 174 16 18 chrUextra 8383458 8384231 -20620425 - SAR_DM Satellite Satellite -313 1159 389 8 648 6383 20 4 0 chrUextra 8384331 8385125 -20619531 + ROO_I LTR Pao 1323 2119 -6137 8 648 318 26 0 0 chrUextra 8385225 8385264 -20619392 + ARS406_DM Unknown Unknown 123 161 -192 8 648 1528 160 37 24 chrUextra 8385229 8385835 -20618821 - SAR_DM Satellite Satellite -242 614 1 8 648 1266 13 0 7 chrUextra 8385848 8386002 -20618654 + DOC2_DM LINE Jockey 10 162 -4631 8 648 27 49 0 0 chrUextra 8386776 8386817 -20617839 + AT_rich Low_complexity Low_complexity 1 41 0 8 648 360 121 96 0 chrUextra 8386830 8386913 -20617743 - TART LINE telomeric -3988 10489 10399 8 648 3216 185 6 17 chrUextra 8387013 8387798 -20616858 - SAR_DM Satellite Satellite -1036 776 1 8 649 6904 0 0 0 chrUextra 8389695 8390489 -20614167 - BARI_DM DNA Tc1 -93 1635 842 8 649 2346 105 18 12 chrUextra 8390590 8391381 -20613275 - DMSAT6 Satellite Satellite -11 796 1 8 649 824 18 0 67 chrUextra 8391483 8391603 -20613053 - Gypsy4_I LTR Gypsy -6060 228 117 8 649 2120 46 7 37 chrUextra 8391619 8391915 -20612741 - Gypsy4_LTR LTR Gypsy 0 287 1 8 649 1043 90 18 12 chrUextra 8392024 8392193 -20612463 + HOBO DNA hAT 23 192 -2824 8 649 3085 189 14 21 chrUextra 8392377 8393170 -20611486 - SAR_DM Satellite Satellite -261 1211 425 8 649 1764 14 9 0 chrUextra 8393271 8393485 -20611171 - R1_DM LINE R1 -734 4622 4407 8 649 4598 16 2 2 chrUextra 8393505 8394065 -20610591 - R1_DM LINE R1 -1074 4282 3723 8 649 1325 21 21 21 chrUextra 8394165 8394358 -20610298 - NTS_DM Other Other -10 230 38 8 649 870 9 0 27 chrUextra 8394358 8394470 -20610186 - NTS_DM Other Other -107 133 25 8 649 25 51 0 0 chrUextra 8394493 8394532 -20610124 + AT_rich Low_complexity Low_complexity 1 39 0 8 649 261 125 0 0 chrUextra 8394545 8394585 -20610071 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 649 246 150 0 0 chrUextra 8394637 8394677 -20609979 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 649 29 28 0 0 chrUextra 8394682 8394718 -20609938 + AT_rich Low_complexity Low_complexity 1 36 0 8 649 1458 0 6 0 chrUextra 8394790 8394959 -20609697 - LSU-rRNA_Dme rRNA rRNA 0 3900 3731 8 649 1522 161 3 7 chrUextra 8395062 8395363 -20609293 + SAR_DM Satellite Satellite 604 903 -569 8 649 832 108 0 92 chrUextra 8395370 8395544 -20609112 - ARS406_DM Unknown Unknown -195 158 1 8 649 1745 192 2 2 chrUextra 8395430 8395827 -20608829 + SAR_DM Satellite Satellite 531 927 -545 8 649 837 0 0 0 chrUextra 8395953 8396053 -20608603 - NOMAD_LTR LTR Gypsy -418 100 1 8 649 36 55 0 52 chrUextra 8396347 8396463 -20608193 + AT_rich Low_complexity Low_complexity 1 110 0 8 649 1800 9 0 0 chrUextra 8396536 8396747 -20607909 + SSU-rRNA_Dme rRNA rRNA 1 211 -1784 8 649 2866 189 11 26 chrUextra 8396848 8397641 -20607015 - SAR_DM Satellite Satellite -601 781 1 8 649 6811 4 0 0 chrUextra 8397741 8398533 -20606123 + FW_DM LINE Jockey 1207 1998 -2694 8 649 22 56 0 0 chrUextra 8398737 8398773 -20605883 + AT_rich Low_complexity Low_complexity 1 36 0 8 649 424 107 107 0 chrUextra 8399529 8399613 -20605043 - TART LINE telomeric -4950 9527 9435 8 649 2065 202 43 16 chrUextra 8399616 8400169 -20604487 - TAHRE LINE telomeric -2590 7873 7306 8 649 650 25 0 0 chrUextra 8400243 8400323 -20604333 + G2_DM LINE Jockey 2891 2970 -132 8 649 817 145 190 36 chrUextra 8400938 8401217 -20603439 - MAX_I LTR Pao -7347 567 246 8 649 2335 108 18 37 chrUextra 8401317 8402105 -20602551 - DMSAT6 Satellite Satellite -77 772 1 8 649 3028 185 10 16 chrUextra 8402215 8402983 -20601673 - SAR_DM Satellite Satellite -514 958 195 8 649 659 115 0 9 chrUextra 8402889 8403003 -20601653 + ARS406_DM Unknown Unknown 1 113 -240 8 649 6714 4 4 2 chrUextra 8403103 8403896 -20600760 - LSU-rRNA_Dme rRNA rRNA -2146 1754 961 8 649 4322 14 0 0 chrUextra 8403998 8404504 -20600152 - Gypsy4_I LTR Gypsy -133 6155 5650 8 649 2262 14 0 0 chrUextra 8404509 8404788 -20599868 - Gypsy4_I LTR Gypsy -890 5398 5120 8 649 3042 197 14 19 chrUextra 8404889 8405682 -20598974 - SAR_DM Satellite Satellite -257 1215 427 8 649 242 331 0 0 chrUextra 8405784 8405923 -20598733 - ROVER-I_DM LTR Gypsy -3870 2714 2576 8 649 1363 12 6 6 chrUextra 8405901 8406069 -20598587 + TLD3 Unknown Unknown 2 169 -3 8 649 470 284 28 28 chrUextra 8406041 8406331 -20598325 - DM176_I LTR Gypsy -4292 2128 1839 8 649 1360 22 0 11 chrUextra 8406678 8406858 -20597798 - NTS_DM Other Other -62 178 1 8 649 813 6 363 22 chrUextra 8406858 8407037 -20597619 - NTS_DM Other Other 0 240 1 8 649 1438 15 20 20 chrUextra 8407037 8407240 -20597416 - NTS_DM Other Other 0 240 38 8 649 870 9 0 27 chrUextra 8407240 8407352 -20597304 - NTS_DM Other Other -107 133 25 8 649 398 48 0 16 chrUextra 8407404 8407468 -20597188 - NTS_DM Other Other -39 201 139 8 649 6590 15 0 1 chrUextra 8407568 8408361 -20596295 + DMRT1B LINE R1 1577 2368 -2815 8 649 4067 43 3 7 chrUextra 8408653 8409246 -20595410 - PROTOP_A DNA P 0 1105 570 8 649 2000 4 0 0 chrUextra 8409354 8409583 -20595073 + ROO_LTR LTR Pao 200 428 0 8 649 4557 4 0 23 chrUextra 8409583 8410147 -20594509 + ROO_I LTR Pao 1 551 -7705 8 649 6840 1 0 0 chrUextra 8410247 8411040 -20593616 + TART LINE telomeric 5286 6078 -8399 8 649 3049 192 28 18 chrUextra 8411140 8411915 -20592741 - SAR_DM Satellite Satellite -321 1151 369 8 649 2325 83 45 15 chrUextra 8412033 8412826 -20591830 + DMSAT6 Satellite Satellite 1 817 -29 8 649 818 220 134 15 chrUextra 8412931 8413509 -20591147 + TART LINE telomeric 3318 4029 -10448 8 649 477 240 19 38 chrUextra 8413484 8413644 -20591012 + TART_B1 LINE telomeric 8329 8485 -2169 8 649 585 27 0 0 chrUextra 8413646 8413719 -20590937 + TART LINE telomeric 10663 10735 -3742 8 649 1838 5 0 0 chrUextra 8413819 8414029 -20590627 + PROTOP_A DNA P 896 1105 0 8 649 1140 84 12 0 chrUextra 8414029 8414183 -20590473 + DOC3_DM LINE Jockey 1740 1895 -2845 8 649 3467 24 19 0 chrUextra 8414187 8414612 -20590044 + DOC3_DM LINE Jockey 2205 2637 -2103 8 649 1620 0 0 0 chrUextra 8415073 8415501 -20589155 + (CTATT)n Simple_repeat Simple_repeat 1 428 0 8 649 5120 19 14 3 chrUextra 8415605 8416247 -20588409 - R1_DM LINE R1 -1217 4139 3491 8 649 1165 20 0 7 chrUextra 8416249 8416398 -20588258 - R1_DM LINE R1 -2388 2968 2821 8 649 6342 18 1 0 chrUextra 8416498 8417291 -20587365 - QUASIMODO_I LTR Gypsy -4570 1490 697 8 649 6664 11 5 0 chrUextra 8417392 8418184 -20586472 + FW_DM LINE Jockey 690 1485 -3207 8 649 229 143 20 0 chrUextra 8418408 8418457 -20586199 - RSP Satellite Satellite -9 109 60 8 649 229 143 20 0 chrUextra 8418574 8418623 -20586033 - RSP Satellite Satellite -9 109 60 8 649 226 65 0 0 chrUextra 8418740 8418771 -20585885 - RSP Satellite Satellite -9 109 79 8 649 3741 2 0 0 chrUextra 8419177 8419608 -20585048 + ACCORD_LTR LTR Gypsy 128 558 0 8 649 1945 86 233 0 chrUextra 8419609 8419970 -20584686 - TART LINE telomeric -6575 7902 7458 8 649 3606 184 14 13 chrUextra 8420070 8420863 -20583793 - TAHRE LINE telomeric -56 10407 9614 8 649 288 140 20 0 chrUextra 8420963 8421013 -20583643 - HETRP_DM Satellite Satellite -293 1579 1529 8 649 487 240 0 16 chrUextra 8421164 8421287 -20583369 - HETRP_DM Satellite Satellite -203 1669 1549 8 649 498 17 0 0 chrUextra 8421287 8421346 -20583310 + (TC)n Simple_repeat Simple_repeat 2 60 0 8 649 625 200 7 14 chrUextra 8421477 8421619 -20583037 - HETRP_DM Satellite Satellite -203 1669 1529 8 649 24 53 0 0 chrUextra 8421707 8421745 -20582911 + AT_rich Low_complexity Low_complexity 1 38 0 8 649 6599 13 2 1 chrUextra 8421856 8422649 -20582007 + FW_DM LINE Jockey 92 885 -3807 8 649 741 85 0 8 chrUextra 8422749 8422867 -20581789 - ARS406_DM Unknown Unknown -236 117 1 8 649 3065 193 5 10 chrUextra 8422770 8423541 -20581115 + SAR_DM Satellite Satellite 192 958 -514 8 649 6347 15 44 4 chrUextra 8423642 8424435 -20580221 - MICROPIA_I LTR Gypsy -291 4185 3361 8 649 5417 0 2 0 chrUextra 8424535 8425152 -20579504 + LSU-rRNA_Dme rRNA rRNA 3283 3900 0 8 649 22 56 0 0 chrUextra 8425224 8425260 -20579396 + AT_rich Low_complexity Low_complexity 1 36 0 8 649 246 150 0 0 chrUextra 8425265 8425305 -20579351 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 649 3418 178 8 14 chrUextra 8425429 8426221 -20578435 + SAR_DM Satellite Satellite 332 1118 -354 8 649 1588 0 0 0 chrUextra 8426321 8426505 -20578151 - ROO_I LTR Pao -8072 184 1 8 649 3742 2 0 0 chrUextra 8426505 8426933 -20577723 - ROO_LTR LTR Pao 0 428 1 8 649 1264 61 0 0 chrUextra 8426933 8427114 -20577542 - ROO_I LTR Pao 0 8256 8076 8 649 2138 186 13 21 chrUextra 8427214 8427746 -20576910 + SAR_DM Satellite Satellite 517 1044 -428 8 649 857 181 37 14 chrUextra 8427789 8428007 -20576649 + SAR_DM Satellite Satellite 543 765 -707 8 649 2262 125 57 132 chrUextra 8428107 8428900 -20575756 + BATUMI_I LTR Pao 421 1153 -6810 8 649 6804 1 0 0 chrUextra 8429000 8429793 -20574863 - DOC LINE Jockey -2559 2166 1374 8 649 1353 315 18 26 chrUextra 8429917 8430679 -20573977 - Invader6_I LTR Gypsy -1465 2634 1879 8 649 849 10 0 0 chrUextra 8430786 8430884 -20573772 + (TATAA)n Simple_repeat Simple_repeat 3 100 0 8 649 1479 19 0 0 chrUextra 8430902 8431170 -20573486 + (TATAA)n Simple_repeat Simple_repeat 1 268 0 8 649 2600 33 3 3 chrUextra 8431170 8431501 -20573155 - DM1731_LTR LTR Copia -1 335 5 8 649 648 26 0 0 chrUextra 8431501 8431579 -20573077 + (TATAA)n Simple_repeat Simple_repeat 4 81 0 8 649 22 35 0 0 chrUextra 8431695 8431724 -20572932 + AT_rich Low_complexity Low_complexity 1 29 0 8 649 284 48 24 0 chrUextra 8431823 8431865 -20572791 + (TAAAA)n Simple_repeat Simple_repeat 4 46 0 8 649 27 0 0 0 chrUextra 8431876 8431903 -20572753 + AT_rich Low_complexity Low_complexity 1 27 0 8 649 212 87 0 61 chrUextra 8431903 8431952 -20572704 + (CAAAAA)n Simple_repeat Simple_repeat 2 47 0 8 649 337 0 0 0 chrUextra 8431971 8432011 -20572645 + STALKER4_I LTR Gypsy 6491 6530 0 8 649 2719 20 63 3 chrUextra 8432011 8432212 -20572444 + Stalker3_LTR LTR Gypsy 1 201 -171 8 649 207 0 0 0 chrUextra 8432212 8432235 -20572421 + (ATAAG)n Simple_repeat Simple_repeat 2 24 0 8 649 2719 20 63 3 chrUextra 8432235 8432384 -20572272 + Stalker3_LTR LTR Gypsy 202 370 -2 8 649 611 80 0 0 chrUextra 8432384 8432472 -20572184 - R1_DM LINE R1 -523 4833 4746 8 649 4117 33 138 10 chrUextra 8432572 8433365 -20571291 - BATUMI_I LTR Pao -5513 2450 1557 8 649 6508 24 0 0 chrUextra 8433468 8434258 -20570398 - R1_DM LINE R1 -1534 3822 3033 8 649 4466 17 2 0 chrUextra 8434358 8434891 -20569765 + R1_DM LINE R1 4823 5356 0 8 649 1597 75 9 0 chrUextra 8434924 8435151 -20569505 + R1_DM LINE R1 1 229 -5127 8 649 247 269 125 43 chrUextra 8435373 8435742 -20568914 - QUASIMODO_I LTR Gypsy 0 6060 5662 8 649 2769 9 3 0 chrUextra 8435715 8436044 -20568612 - IVK_DM LINE I 0 5402 5073 8 649 1288 176 11 22 chrUextra 8436147 8436420 -20568236 + DM176_I LTR Gypsy 4012 4281 -2139 8 649 1111 29 0 0 chrUextra 8436419 8436556 -20568100 - DMCR1A LINE CR1 -3534 936 800 8 649 2237 32 34 110 chrUextra 8436554 8436935 -20567721 - DMCR1A LINE CR1 -4063 407 56 8 649 320 287 13 0 chrUextra 8437052 8437202 -20567454 + I_DM LINE I 3822 3973 -2258 8 649 897 192 0 0 chrUextra 8437554 8437741 -20566915 - MDG1_I LTR Gypsy -4119 2477 2291 8 649 3367 174 9 19 chrUextra 8437937 8438723 -20565933 - SAR_DM Satellite Satellite -353 1119 342 8 649 6323 28 34 0 chrUextra 8438823 8439616 -20565040 - R1_DM LINE R1 -2654 2702 1883 8 649 4120 8 0 0 chrUextra 8439716 8440208 -20564448 + MDG3_I LTR Gypsy 2012 2503 -2483 8 649 2282 7 0 66 chrUextra 8440207 8440509 -20564147 + DOC6_DM LINE Jockey 1 282 -3940 8 649 946 70 5 19 chrUextra 8440616 8441372 -20563284 + RSP Satellite Satellite 1 745 0 8 649 4586 6 0 2 chrUextra 8441502 8442033 -20562623 - R2_DM LINE R2 -3075 532 3 8 649 2214 0 0 0 chrUextra 8442042 8442295 -20562361 - LSU-rRNA_Dme rRNA rRNA -1692 2208 1956 8 649 2363 7 0 0 chrUextra 8443288 8443565 -20561091 + MDG1_I LTR Gypsy 4081 4357 -2239 8 649 2984 14 0 0 chrUextra 8443565 8443921 -20560735 - MDG1_LTR LTR Gypsy 0 442 87 8 649 423 100 0 0 chrUextra 8443921 8443991 -20560665 + (TTA)n Simple_repeat Simple_repeat 3 72 0 8 649 526 33 8 0 chrUextra 8443995 8444081 -20560575 - MDG1_I LTR Gypsy 0 6596 6523 8 649 3583 0 2 0 chrUextra 8444181 8444590 -20560066 + SSU-rRNA_Dme rRNA rRNA 1586 1995 0 8 649 21 89 0 0 chrUextra 8444609 8444665 -20559991 + AT_rich Low_complexity Low_complexity 1 56 0 8 649 2093 19 4 25 chrUextra 8445074 8445351 -20559305 + BATUMI_I LTR Pao 7016 7286 -677 8 649 2011 141 1 2 chrUextra 8445341 8445867 -20558789 + G_DM LINE Jockey 622 1145 -897 8 649 3074 189 15 21 chrUextra 8445968 8446759 -20557897 + SAR_DM Satellite Satellite 432 1217 -255 8 649 6653 14 5 0 chrUextra 8446860 8447653 -20557003 - DMRT1B LINE R1 -2511 2672 1876 8 649 6486 25 1 0 chrUextra 8447753 8448546 -20556110 + R1_DM LINE R1 2924 3717 -1639 8 649 975 109 0 0 chrUextra 8448647 8449002 -20555654 + (TAA)n Simple_repeat Simple_repeat 1 355 0 8 649 28 0 0 0 chrUextra 8449004 8449032 -20555624 + AT_rich Low_complexity Low_complexity 1 28 0 8 649 975 116 0 0 chrUextra 8449165 8449439 -20555217 + (TAA)n Simple_repeat Simple_repeat 1 274 0 8 649 1388 6 6 0 chrUextra 8449539 8449705 -20554951 - DM1731_I LTR Copia -3809 167 1 8 649 2717 33 0 0 chrUextra 8449705 8450041 -20554615 - DM1731_LTR LTR Copia 0 336 1 8 649 2355 3 10 17 chrUextra 8450041 8450332 -20554324 - DM1731_I LTR Copia 0 3976 3688 8 649 24 32 0 0 chrUextra 8450740 8450771 -20553885 + AT_rich Low_complexity Low_complexity 1 31 0 8 649 245 279 0 0 chrUextra 8450777 8450845 -20553811 + Invader4_I LTR Gypsy 1235 1302 -1111 8 649 448 329 57 14 chrUextra 8450924 8451220 -20553436 + Invader6_I LTR Gypsy 1629 1937 -2162 8 649 235 146 0 0 chrUextra 8452217 8452258 -20552398 - DMCR1A LINE CR1 -3686 784 744 8 649 579 138 43 17 chrUextra 8452325 8452525 -20552131 + DMCR1A LINE CR1 365 460 -4010 8 649 3110 30 4 54 chrUextra 8452544 8453008 -20551648 + DOC5_DM LINE Jockey 3979 4419 -263 8 649 6619 14 0 0 chrUextra 8453108 8453900 -20550756 - FW_DM LINE Jockey -1577 3115 2324 8 649 2497 3 0 0 chrUextra 8454000 8454290 -20550366 - DOC LINE Jockey -4431 294 5 8 649 3224 46 16 45 chrUextra 8454287 8454792 -20549864 + ROO_I LTR Pao 144 633 -7623 8 649 551 0 131 6 chrUextra 8455818 8455978 -20548678 + (GA)n Simple_repeat Simple_repeat 1 180 0 8 649 616 134 46 17 chrUextra 8455967 8456141 -20548515 + GA-rich Low_complexity Low_complexity 1 179 0 8 649 6374 20 1 5 chrUextra 8456677 8457468 -20547188 + NINJA_I LTR Pao 4854 5641 -370 8 649 2996 0 0 0 chrUextra 8458460 8458802 -20545854 + LSU-rRNA_Dme rRNA rRNA 3559 3900 0 8 649 27 29 0 0 chrUextra 8458874 8458908 -20545748 + AT_rich Low_complexity Low_complexity 1 34 0 8 649 246 150 0 0 chrUextra 8458913 8458953 -20545703 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 649 246 150 0 0 chrUextra 8459005 8459045 -20545611 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 649 246 150 0 0 chrUextra 8459097 8459137 -20545519 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 649 255 125 0 0 chrUextra 8459180 8459220 -20545436 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 649 405 191 0 0 chrUextra 8459352 8459457 -20545199 + (CATAA)n Simple_repeat Simple_repeat 5 109 0 8 649 3964 17 0 8 chrUextra 8459458 8459943 -20544713 + T412LTR LTR LTR 1 481 0 8 649 4104 18 0 15 chrUextra 8459626 8460144 -20544512 + DM412 LTR Gypsy 1 510 -6387 8 649 954 24 0 45 chrUextra 8460244 8460378 -20544278 + Invader1_I LTR Gypsy 3059 3186 0 8 649 3647 5 2 0 chrUextra 8460378 8460800 -20543856 + Invader1_LTR LTR Gypsy 1 423 0 8 649 2045 0 0 4 chrUextra 8460800 8461036 -20543620 + Invader1_I LTR Gypsy 1 235 -2951 8 649 34 24 0 0 chrUextra 8461221 8461262 -20543394 + AT_rich Low_complexity Low_complexity 1 41 0 8 649 3380 175 13 16 chrUextra 8462033 8462819 -20541837 + SAR_DM Satellite Satellite 321 1103 -369 8 649 3428 181 9 9 chrUextra 8462926 8463712 -20540944 - SAR_DM Satellite Satellite -425 1047 262 8 649 601 300 47 39 chrUextra 8463839 8464258 -20540398 - BURDOCK_I LTR Gypsy -2361 3499 2969 8 649 865 38 15 0 chrUextra 8464473 8464604 -20540052 - TLD2 Unknown Unknown 0 218 86 8 649 3221 181 18 17 chrUextra 8464704 8465481 -20539175 + SAR_DM Satellite Satellite 341 1118 -354 8 649 288 232 10 10 chrUextra 8465396 8465496 -20539160 - XDMR_DM Unknown Unknown 0 360 261 8 649 675 293 29 6 chrUextra 8465603 8465953 -20538703 + ROVER-I_DM LTR Gypsy 1278 1635 -4949 8 649 550 270 67 0 chrUextra 8465981 8466159 -20538497 + ROVER-I_DM LTR Gypsy 2190 2379 -4205 8 649 266 282 107 89 chrUextra 8466690 8466970 -20537686 - Invader1_LTR LTR Gypsy -55 368 84 8 649 405 150 0 24 chrUextra 8467179 8467261 -20537395 + DMLTR5 LTR Gypsy 44 123 -143 8 649 665 116 0 0 chrUextra 8467380 8467492 -20537164 - ARS406_DM Unknown Unknown -241 112 1 8 649 3271 177 11 11 chrUextra 8467399 8468163 -20536493 + SAR_DM Satellite Satellite 195 958 -514 8 649 3142 0 0 0 chrUextra 8468272 8468633 -20536023 - FW_DM LINE Jockey -4331 361 1 8 649 3357 16 0 0 chrUextra 8468639 8469064 -20535592 - Invader2_I LTR Gypsy -1803 2789 2365 8 649 3272 187 9 9 chrUextra 8469164 8469943 -20534713 - SAR_DM Satellite Satellite -470 1002 224 8 649 435 120 0 0 chrUextra 8469881 8469956 -20534700 + ARS406_DM Unknown Unknown 1 75 -278 8 649 4080 21 59 0 chrUextra 8470056 8470848 -20533808 - R1_DM LINE R1 -1600 3756 2918 8 649 3128 182 19 13 chrUextra 8470948 8471720 -20532936 - SAR_DM Satellite Satellite -501 971 195 8 649 518 129 10 10 chrUextra 8471638 8471740 -20532916 + ARS406_DM Unknown Unknown 13 114 -239 8 649 5183 46 54 24 chrUextra 8471840 8472593 -20532063 - BATUMI_I LTR Pao -6234 1729 954 8 649 29 28 0 0 chrUextra 8472596 8472632 -20532024 + AT_rich Low_complexity Low_complexity 1 36 0 8 649 246 150 0 0 chrUextra 8472929 8472969 -20531687 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 649 255 125 0 0 chrUextra 8473012 8473052 -20531604 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 649 886 0 0 27 chrUextra 8473127 8473239 -20531417 + NTS_DM Other Other 25 133 -107 8 649 1252 18 0 6 chrUextra 8473239 8473404 -20531252 + NTS_DM Other Other 38 201 -39 8 649 516 15 0 44 chrUextra 8473456 8473524 -20531132 + NTS_DM Other Other 25 89 -151 8 649 28 48 0 0 chrUextra 8473630 8473672 -20530984 + AT_rich Low_complexity Low_complexity 1 42 0 8 649 488 119 36 0 chrUextra 8473945 8474029 -20530627 - NTS_DM Other Other -150 90 4 8 649 1283 12 0 18 chrUextra 8474139 8474304 -20530352 - NTS_DM Other Other -78 162 1 8 649 736 9 36 27 chrUextra 8474304 8474416 -20530240 - NTS_DM Other Other 0 240 128 8 649 6451 23 0 1 chrUextra 8474516 8475308 -20529348 + ROO_I LTR Pao 943 1733 -6523 8 649 3067 210 53 8 chrUextra 8475410 8476197 -20528459 + TAHRE LINE telomeric 603 1425 -9038 8 649 5880 24 37 14 chrUextra 8476302 8477092 -20527564 + ROO_I LTR Pao 3344 4151 -4105 8 649 3711 2 0 2 chrUextra 8477515 8477944 -20526712 - ROO_LTR LTR Pao 0 428 1 8 649 323 0 25 0 chrUextra 8477944 8477984 -20526672 - ROO_I LTR Pao 0 8256 8216 8 649 5713 48 35 1 chrUextra 8478084 8478876 -20525780 + R1_DM LINE R1 470 1288 -4068 8 649 836 19 9 0 chrUextra 8478976 8479082 -20525574 - DM297_I LTR Gypsy -6060 107 1 8 649 3368 5 7 7 chrUextra 8479082 8479496 -20525160 - DM297_LTR LTR Gypsy 0 414 1 8 649 6726 15 0 0 chrUextra 8479868 8480656 -20524000 + MAX_I LTR Pao 3237 4024 -3890 8 649 6628 2 2 0 chrUextra 8480760 8481552 -20523104 - ROO_I LTR Pao -118 8138 7345 8 649 5381 16 0 0 chrUextra 8481652 8482288 -20522368 + LSU-rRNA_Dme rRNA rRNA 1946 2581 -1319 8 649 1148 15 0 0 chrUextra 8482309 8482444 -20522212 + R2_DM LINE R2 3 137 -3470 8 649 2158 40 0 0 chrUextra 8482544 8482816 -20521840 - PROTOP_A DNA P -833 272 1 8 649 699 118 96 58 chrUextra 8482816 8482971 -20521685 + TART LINE telomeric 3884 4029 -10448 8 649 310 49 0 0 chrUextra 8483035 8483076 -20521580 + TART_B1 LINE telomeric 6297 6337 -4317 8 649 2091 41 11 0 chrUextra 8483067 8483336 -20521320 + TART LINE telomeric 2045 2316 -12161 8 649 2931 186 56 17 chrUextra 8483437 8484228 -20520428 - SAR_DM Satellite Satellite -610 822 1 8 649 6523 19 4 0 chrUextra 8484328 8485120 -20519536 + R1_DM LINE R1 1714 2508 -2848 8 649 1620 2 45 30 chrUextra 8485455 8485859 -20518797 + (CAAGA)n Simple_repeat Simple_repeat 1 409 0 8 649 3328 8 0 0 chrUextra 8486112 8486501 -20518155 - LSU-rRNA_Dme rRNA rRNA -872 3028 2640 8 649 3363 20 0 0 chrUextra 8486499 8486904 -20517752 - R1_DM LINE R1 0 5356 4952 8 649 5787 23 8 13 chrUextra 8487004 8487795 -20516861 + STALKER4_I LTR Gypsy 5711 6497 -33 8 649 2369 173 8 6 chrUextra 8487896 8488687 -20515969 - SAR_DM Satellite Satellite -667 791 1 8 649 23 68 0 0 chrUextra 8489255 8489299 -20515357 + AT_rich Low_complexity Low_complexity 1 44 0 8 649 3442 181 9 9 chrUextra 8489685 8490472 -20514184 - SAR_DM Satellite Satellite -425 1047 261 8 649 1158 120 0 0 chrUextra 8490572 8490790 -20513866 + (TA)n Simple_repeat Simple_repeat 1 218 0 8 649 956 146 33 102 chrUextra 8490790 8491034 -20513622 - DMLTR5 LTR Gypsy 0 266 40 8 649 793 135 0 0 chrUextra 8491122 8491248 -20513408 - HMSBEAGLE_I LTR Gypsy 0 6529 6404 8 649 6029 33 4 1 chrUextra 8491464 8492256 -20512400 + STALKER4_I LTR Gypsy 2541 3334 -3196 8 649 4748 128 9 5 chrUextra 8492356 8493148 -20511508 + HETA LINE telomeric 2541 3335 -2746 8 649 1103 28 7 0 chrUextra 8493248 8493390 -20511266 - FW_DM LINE Jockey -1950 2742 2600 8 649 3614 18 2 2 chrUextra 8493389 8493833 -20510823 - FW_DM LINE Jockey -2499 2193 1750 8 649 1215 48 117 41 chrUextra 8493842 8494039 -20510617 + ROO_I LTR Pao 4193 4404 -3852 8 649 28 48 0 0 chrUextra 8494692 8494734 -20509922 + AT_rich Low_complexity Low_complexity 1 42 0 8 649 6313 26 0 0 chrUextra 8495032 8495824 -20508832 - MDG1_I LTR Gypsy -1414 5182 4391 8 649 1743 10 0 19 chrUextra 8495924 8496137 -20508519 + ACCORD2_LTR LTR Gypsy 7 215 0 8 649 4565 14 21 24 chrUextra 8496137 8496716 -20507940 + ACCORD2_I LTR Gypsy 1 577 -6635 8 649 1179 28 0 0 chrUextra 8497044 8497187 -20507469 + (CAATA)n Simple_repeat Simple_repeat 5 147 0 8 649 5762 5 11 3 chrUextra 8497708 8498451 -20506205 + STALKER4_I LTR Gypsy 5782 6530 0 8 649 407 20 0 0 chrUextra 8498451 8498500 -20506156 + STALKER4_LTR LTR Gypsy 1 49 -353 8 649 6917 2 0 0 chrUextra 8498600 8499392 -20505264 - DIVER_I LTR Pao -3570 2073 1282 8 649 4357 4 0 2 chrUextra 8499492 8500000 -20504656 + LSU-rRNA_Dme rRNA rRNA 2084 2590 -1310 8 649 562 0 0 0 chrUextra 8500000 8500064 -20504592 + LSU-rRNA_Dme rRNA rRNA 2591 2654 -1246 8 649 1869 18 0 0 chrUextra 8500060 8500284 -20504372 + R1_DM LINE R1 3279 3502 -1854 8 649 1093 23 0 0 chrUextra 8500596 8500727 -20503929 + DMRT1B LINE R1 1 131 -5052 8 649 4660 9 2 0 chrUextra 8501276 8501837 -20502819 - STALKER4_I LTR Gypsy -1376 5154 4593 8 649 1656 13 198 0 chrUextra 8501841 8502068 -20502588 - STALKER4_I LTR Gypsy -2522 4008 3737 8 649 24 0 0 0 chrUextra 8502168 8502192 -20502464 + AT_rich Low_complexity Low_complexity 1 24 0 8 649 3053 58 1 14 chrUextra 8502280 8502711 -20501945 - STALKER4_LTR LTR Gypsy -3 399 9 8 649 1610 30 21 0 chrUextra 8502721 8502956 -20501700 - STALKER4_I LTR Gypsy 0 6530 6291 8 649 3476 247 24 19 chrUextra 8503066 8504744 -20499912 - SAR_DM Satellite Satellite -216 1687 1 8 649 6424 34 0 1 chrUextra 8505736 8506528 -20498128 + R1_DM LINE R1 1391 2181 -3175 8 649 6273 28 0 11 chrUextra 8506628 8507418 -20497238 - R1_DM LINE R1 -2154 3202 2422 8 649 2268 172 26 8 chrUextra 8507520 8508301 -20496355 - SAR_DM Satellite Satellite -535 795 1 8 649 22 0 0 0 chrUextra 8509613 8509635 -20495021 + AT_rich Low_complexity Low_complexity 1 22 0 8 649 2275 113 5 24 chrUextra 8510197 8510988 -20493668 - DMSAT6 Satellite Satellite -251 775 1 8 649 201 277 0 0 chrUextra 8511094 8511159 -20493497 + (CTATT)n Simple_repeat Simple_repeat 2 66 0 8 649 540 214 0 0 chrUextra 8511159 8511337 -20493319 + (TTATG)n Simple_repeat Simple_repeat 2 179 0 8 649 566 115 106 29 chrUextra 8511376 8511546 -20493110 + NTS_DM Other Other 58 240 0 8 649 285 104 21 0 chrUextra 8511546 8511594 -20493062 + NTS_DM Other Other 1 49 -191 8 649 1072 124 0 5 chrUextra 8511676 8511870 -20492786 + NTS_DM Other Other 1 193 -47 8 649 1843 182 33 161 chrUextra 8511979 8512760 -20491896 + TART LINE telomeric 8113 8793 -5684 8 649 3149 180 22 22 chrUextra 8512879 8513661 -20490995 - SAR_DM Satellite Satellite -301 1171 390 8 649 6742 2 13 0 chrUextra 8513761 8514552 -20490104 - DMRT1B LINE R1 -1686 3497 2697 8 649 2880 109 121 28 chrUextra 8514653 8515190 -20489466 - TART LINE telomeric -7157 7320 6734 8 649 359 265 31 52 chrUextra 8515252 8515443 -20489213 - TART LINE telomeric -1492 12985 12799 8 649 2689 173 13 15 chrUextra 8515571 8516334 -20488322 + Gypsy2_I LTR Gypsy 1713 2747 -4265 8 649 3312 0 0 0 chrUextra 8516434 8516812 -20487844 + R2_DM LINE R2 3224 3601 -6 8 649 455 36 0 0 chrUextra 8516808 8516863 -20487793 + LSU-rRNA_Dme rRNA rRNA 2578 2632 -1268 8 649 3115 0 6 0 chrUextra 8516863 8517225 -20487431 + R1_DM LINE R1 1 364 -4992 8 649 6837 0 0 0 chrUextra 8517325 8518116 -20486540 - DOC LINE Jockey -3710 1015 225 8 649 1249 49 5 42 chrUextra 8518216 8518408 -20486248 + G5A_DM LINE Jockey 2657 2841 0 8 649 1404 108 0 9 chrUextra 8518440 8518655 -20486001 - BS2 LINE Jockey -4259 462 250 8 649 367 265 20 0 chrUextra 8518666 8518768 -20485888 - GTWIN_I LTR Gypsy -4772 1649 1546 8 649 751 160 53 0 chrUextra 8518857 8519007 -20485649 - GTWIN_I LTR Gypsy -5149 1272 1115 8 649 733 60 0 41 chrUextra 8519107 8519229 -20485427 - DMCR1A LINE CR1 -4353 117 1 8 649 1843 98 74 3 chrUextra 8519230 8519528 -20485128 - MDG1_LTR LTR Gypsy -30 412 94 8 649 372 88 0 0 chrUextra 8519530 8519587 -20485069 + (TTA)n Simple_repeat Simple_repeat 3 59 0 8 81 849 86 56 21 chrUextra 8519615 8519758 -20484898 + DM176_I LTR Gypsy 2360 2507 -3913 8 650 729 128 45 0 chrUextra 8519765 8519898 -20484758 + DM176_I LTR Gypsy 2641 2779 -3641 8 650 998 114 6 6 chrUextra 8519998 8520166 -20484490 + MDG1_LTR LTR Gypsy 245 412 -30 8 650 2614 30 30 102 chrUextra 8520167 8520606 -20484050 + DMCR1A LINE CR1 1 407 -4063 8 650 1111 29 0 0 chrUextra 8520604 8520741 -20483915 + DMCR1A LINE CR1 800 936 -3534 8 650 2389 116 12 9 chrUextra 8520899 8521680 -20482976 + DMSAT6 Satellite Satellite 1 783 -18 8 650 6576 19 0 0 chrUextra 8521780 8522571 -20482085 - DMRT1B LINE R1 -2840 2343 1553 8 650 1211 35 0 0 chrUextra 8522671 8522816 -20481840 + PROTOP DNA P 4336 4480 0 8 650 28 71 0 0 chrUextra 8523170 8523226 -20481430 + AT_rich Low_complexity Low_complexity 1 56 0 8 650 23 68 0 0 chrUextra 8523272 8523316 -20481340 + AT_rich Low_complexity Low_complexity 1 44 0 8 650 21 89 0 0 chrUextra 8523354 8523410 -20481246 + AT_rich Low_complexity Low_complexity 1 56 0 8 650 3186 177 19 25 chrUextra 8524454 8525242 -20479414 + SAR_DM Satellite Satellite 399 1181 -291 8 650 3311 182 16 14 chrUextra 8525344 8526134 -20478522 + SAR_DM Satellite Satellite 256 1047 -425 8 650 3365 15 2 0 chrUextra 8526235 8526639 -20478017 - PROTOP_A DNA P -700 405 1 8 650 228 100 0 0 chrUextra 8526746 8526786 -20477870 + (A)n Simple_repeat Simple_repeat 1 40 0 8 650 6937 1 0 0 chrUextra 8527126 8527917 -20476739 - SSU-rRNA_Dme rRNA rRNA -914 1081 291 8 650 47 0 0 0 chrUextra 8528662 8528709 -20475947 + AT_rich Low_complexity Low_complexity 1 47 0 8 650 1949 0 0 0 chrUextra 8528908 8529134 -20475522 + BARI_DM DNA Tc1 1502 1727 -1 8 650 4893 0 0 0 chrUextra 8529134 8529699 -20474957 + BARI_DM DNA Tc1 4 568 -1160 8 650 3284 184 10 10 chrUextra 8529799 8530581 -20474075 - SAR_DM Satellite Satellite -467 1005 224 8 650 394 127 0 0 chrUextra 8530519 8530590 -20474066 + ARS406_DM Unknown Unknown 1 71 -282 8 650 6656 6 0 0 chrUextra 8530690 8531481 -20473175 - MDG3_I LTR Gypsy -1053 3933 3143 8 650 531 197 29 14 chrUextra 8531584 8531723 -20472933 + HETRP_DM Satellite Satellite 1529 1669 -203 8 650 665 186 7 14 chrUextra 8531888 8532030 -20472626 + HETRP_DM Satellite Satellite 1529 1669 -203 8 650 646 217 0 44 chrUextra 8532146 8532305 -20472351 + HETRP_DM Satellite Satellite 1518 1669 -203 8 650 357 296 22 22 chrUextra 8532588 8532771 -20471885 - DM297_I LTR Gypsy -3176 2991 2809 8 650 384 39 0 0 chrUextra 8532735 8532787 -20471869 - TLD2 Unknown Unknown 0 218 167 8 650 656 278 30 34 chrUextra 8532786 8533222 -20471434 - Gypsy4_I LTR Gypsy -3792 3220 2431 8 650 6858 0 0 0 chrUextra 8533363 8534154 -20470502 + DMRT1B LINE R1 2750 3540 -1643 8 650 3333 180 10 11 chrUextra 8534254 8535042 -20469614 - SAR_DM Satellite Satellite -489 983 197 8 650 3380 180 11 10 chrUextra 8535151 8535936 -20468720 - SAR_DM Satellite Satellite -425 1047 262 8 650 2387 100 42 22 chrUextra 8536036 8536816 -20467840 + DMSAT6 Satellite Satellite 1 796 -89 8 650 1846 78 0 0 chrUextra 8536927 8537182 -20467474 - PROTOP DNA P -1610 2870 2616 8 650 860 156 54 22 chrUextra 8537383 8537567 -20467089 - ACCORD2_LTR LTR Gypsy 0 215 26 8 650 575 49 286 5 chrUextra 8537568 8537714 -20466942 - ACCORD2_I LTR Gypsy -6963 249 58 8 650 5852 50 4 14 chrUextra 8537818 8538609 -20466047 + R1_DM LINE R1 124 906 -4450 8 650 369 0 0 0 chrUextra 8538711 8538757 -20465899 - Copia_LTR LTR Copia -230 46 1 8 650 4132 0 4 0 chrUextra 8538757 8539237 -20465419 - Copia_I LTR Copia 0 4593 4112 8 650 2221 0 0 0 chrUextra 8539239 8539500 -20465156 - Copia_I LTR Copia -638 3955 3695 8 650 27 29 0 0 chrUextra 8539846 8539880 -20464776 + AT_rich Low_complexity Low_complexity 1 34 0 8 650 21 57 0 0 chrUextra 8540550 8540585 -20464071 + AT_rich Low_complexity Low_complexity 1 35 0 8 650 1252 18 0 6 chrUextra 8540585 8540750 -20463906 - NTS_DM Other Other -39 201 38 8 650 870 9 0 27 chrUextra 8540750 8540862 -20463794 - NTS_DM Other Other -107 133 25 8 650 1252 18 0 6 chrUextra 8540914 8541079 -20463577 - NTS_DM Other Other -39 201 38 8 650 870 9 0 27 chrUextra 8541079 8541191 -20463465 - NTS_DM Other Other -107 133 25 8 650 271 0 0 26 chrUextra 8541243 8541281 -20463375 - NTS_DM Other Other -39 201 165 8 650 577 164 69 28 chrUextra 8541382 8541526 -20463130 + ROVER-I_DM LTR Gypsy 6435 6584 0 8 650 1734 120 44 36 chrUextra 8541526 8541890 -20462766 + ROVER-LTR_DM LTR Gypsy 1 367 0 8 650 370 177 13 0 chrUextra 8541890 8541969 -20462687 + ROVER-I_DM LTR Gypsy 1 80 -6504 8 650 183 80 0 0 chrUextra 8542011 8542036 -20462620 + (A)n Simple_repeat Simple_repeat 1 25 0 8 650 629 104 9 19 chrUextra 8542065 8542173 -20462483 + ROVER-I_DM LTR Gypsy 131 237 -6347 8 650 2774 213 33 12 chrUextra 8542273 8543064 -20461592 - SAR_DM Satellite Satellite -539 807 1 8 650 1771 26 8 45 chrUextra 8544055 8544297 -20460359 - Gypsy4_LTR LTR Gypsy -54 233 1 8 650 1273 111 71 158 chrUextra 8544406 8544728 -20459928 + HOBO DNA hAT 23 316 -2700 8 650 526 156 45 9 chrUextra 8544729 8544839 -20459817 + PROTOP_B DNA P 17 130 -1023 8 650 363 33 180 0 chrUextra 8544956 8545017 -20459639 + I_DM LINE I 5396 5467 -764 8 650 704 104 244 23 chrUextra 8545025 8545232 -20459424 - PROTOP DNA P -3808 672 418 8 650 1884 48 196 0 chrUextra 8545237 8545733 -20458923 - DOC3_DM LINE Jockey 0 4740 4148 8 650 2513 77 23 9 chrUextra 8545843 8546620 -20458036 + DMSAT6 Satellite Satellite 1 788 -18 8 650 6658 2 11 0 chrUextra 8546728 8547519 -20457137 + DM176_I LTR Gypsy 5005 5804 -616 8 650 2148 202 16 50 chrUextra 8547761 8548324 -20456332 - Gypsy12_LTR LTR Gypsy -1792 544 1 8 650 646 47 0 0 chrUextra 8548323 8548408 -20456248 - Gypsy12_I LTR Gypsy 0 5546 5462 8 650 829 0 10 0 chrUextra 8548510 8548609 -20456047 - DM1731_I LTR Copia -3876 100 1 8 650 2717 33 0 0 chrUextra 8548609 8548945 -20455711 - DM1731_LTR LTR Copia 0 336 1 8 650 21 0 0 0 chrUextra 8548960 8548981 -20455675 + AT_rich Low_complexity Low_complexity 1 21 0 8 650 291 83 0 59 chrUextra 8548983 8549034 -20455622 - PROTOP DNA P -4421 59 12 8 650 3118 188 10 26 chrUextra 8549401 8550192 -20454464 - SAR_DM Satellite Satellite -258 1214 437 8 650 3362 3 0 0 chrUextra 8550292 8550680 -20453976 + LSU-rRNA_Dme rRNA rRNA 2194 2581 -1319 8 650 3427 7 0 2 chrUextra 8550678 8551083 -20453573 + R2_DM LINE R2 2558 2961 -646 8 650 6113 23 34 0 chrUextra 8551183 8551972 -20452684 - ROO_I LTR Pao -3011 5245 4430 8 650 283 50 0 0 chrUextra 8552074 8552114 -20452542 + ARS406_DM Unknown Unknown 119 158 -195 8 650 2920 192 11 8 chrUextra 8552121 8552831 -20451825 - SAR_DM Satellite Satellite -569 903 192 8 650 690 132 8 0 chrUextra 8552735 8552864 -20451792 + ARS406_DM Unknown Unknown 1 130 -223 8 650 6213 24 1 0 chrUextra 8552965 8553756 -20450900 - MDG1_I LTR Gypsy -358 6238 5447 8 650 3125 186 14 24 chrUextra 8553856 8554645 -20450011 - SAR_DM Satellite Satellite -264 1208 428 8 650 2590 164 8 38 chrUextra 8554747 8554793 -20449863 + SAR_DM Satellite Satellite 1 52 -1253 8 650 850 60 0 0 chrUextra 8554793 8554910 -20449746 - ARS406_DM Unknown Unknown -164 189 73 8 650 2590 164 8 38 chrUextra 8554910 8555537 -20449119 + SAR_DM Satellite Satellite 53 766 -539 8 650 901 30 14 56 chrUextra 8555640 8555783 -20448873 + BATUMI_LTR LTR Pao 136 272 0 8 650 4298 43 19 20 chrUextra 8555783 8556426 -20448230 + BATUMI_I LTR Pao 1 642 -7321 8 650 6608 13 19 0 chrUextra 8556527 8557316 -20447340 - Invader1_I LTR Gypsy -727 2459 1656 8 650 6585 14 0 0 chrUextra 8557417 8558207 -20446449 - FW_DM LINE Jockey -2878 1814 1025 8 650 5771 21 81 34 chrUextra 8558307 8559097 -20445559 - CIRCE LINE Composite -5496 860 34 8 650 2972 193 24 23 chrUextra 8559198 8559987 -20444669 + SAR_DM Satellite Satellite 425 1214 -258 8 650 3208 180 20 17 chrUextra 8560089 8560853 -20443803 + SAR_DM Satellite Satellite 346 1111 -361 8 650 280 190 0 23 chrUextra 8560776 8560862 -20443794 - XDMR_DM Unknown Unknown 0 360 277 8 650 6663 6 1 8 chrUextra 8560977 8561767 -20442889 + STALKER4_I LTR Gypsy 3813 4597 -1933 8 650 6330 25 4 8 chrUextra 8561867 8562657 -20441999 + R1_DM LINE R1 2607 3393 -1963 8 650 6421 22 6 5 chrUextra 8562757 8563547 -20441109 - FW_DM LINE Jockey -328 4364 3574 8 650 3687 7 0 0 chrUextra 8563647 8564087 -20440569 - DMRT1B LINE R1 -4372 811 372 8 650 1691 114 25 0 chrUextra 8564112 8564437 -20440219 - TART_B1 LINE telomeric -8410 2244 1912 8 650 522 211 14 37 chrUextra 8565147 8565323 -20439333 - TART_B1 LINE telomeric -10122 532 381 8 650 2649 198 66 25 chrUextra 8565442 8566213 -20438443 - TAHRE LINE telomeric -548 9915 9113 8 650 21 89 0 0 chrUextra 8566506 8566562 -20438094 + AT_rich Low_complexity Low_complexity 1 56 0 8 650 30 77 0 0 chrUextra 8566687 8566752 -20437904 + AT_rich Low_complexity Low_complexity 1 65 0 8 650 3462 1 47 0 chrUextra 8567207 8567997 -20436659 + Copia_I LTR Copia 1536 2362 -2231 8 650 579 223 20 20 chrUextra 8568149 8568313 -20436343 + Gypsy6_I LTR Gypsy 5178 5318 -1694 8 650 6967 0 0 0 chrUextra 8568987 8569777 -20434879 - Gypsy6_I LTR Gypsy -962 6050 5261 8 650 5999 28 57 4 chrUextra 8570770 8571547 -20433109 - CIRCE LINE Composite -2777 3579 2762 8 650 1190 184 47 82 chrUextra 8571657 8572142 -20432514 - TAHRE LINE telomeric -2207 8256 7789 8 650 231 128 0 0 chrUextra 8572115 8572154 -20432502 - HETA LINE telomeric -1495 4586 4548 8 650 743 196 53 105 chrUextra 8572162 8572447 -20432209 - TAHRE LINE telomeric -2981 7482 7213 8 650 6530 10 30 0 chrUextra 8572547 8573337 -20431319 + DOC2_DM LINE Jockey 2095 2908 -1885 8 650 3266 174 9 9 chrUextra 8573447 8574193 -20430463 - SAR_DM Satellite Satellite -535 937 192 8 650 863 85 0 0 chrUextra 8574097 8574227 -20430429 + ARS406_DM Unknown Unknown 1 130 -223 8 650 1158 122 0 0 chrUextra 8574327 8574541 -20430115 + (TA)n Simple_repeat Simple_repeat 1 214 0 8 650 2316 8 0 0 chrUextra 8574541 8574807 -20429849 - DMLTR5 LTR Gypsy 0 266 1 8 650 2664 0 0 0 chrUextra 8574807 8575117 -20429539 - HMSBEAGLE_I LTR Gypsy 0 6529 6220 8 650 999 75 0 0 chrUextra 8575222 8575368 -20429288 - ARS406_DM Unknown Unknown -164 189 44 8 650 2493 187 22 18 chrUextra 8575368 8576007 -20428649 + SAR_DM Satellite Satellite 1 642 -354 8 650 3074 191 14 20 chrUextra 8576107 8576893 -20427763 - SAR_DM Satellite Satellite -549 781 1 8 650 4030 34 0 0 chrUextra 8576997 8577504 -20427152 + PROTOP_A DNA P 599 1105 0 8 650 2185 46 18 0 chrUextra 8577504 8577787 -20426869 - DMCR1A LINE CR1 -860 3610 3323 8 650 3369 25 107 1 chrUextra 8577889 8578677 -20425979 + MAX_I LTR Pao 3126 3996 -3918 8 650 569 14 0 0 chrUextra 8578777 8578847 -20425809 + STALKER4_I LTR Gypsy 6461 6530 0 8 650 3328 8 10 2 chrUextra 8578847 8579246 -20425410 + STALKER4_LTR LTR Gypsy 1 402 0 8 650 2383 20 3 3 chrUextra 8579273 8579567 -20425089 - MAX_I LTR Pao -824 7090 6797 8 650 6421 23 1 0 chrUextra 8579667 8580457 -20424199 + ROO_I LTR Pao 1181 1971 -6285 8 650 6449 27 0 0 chrUextra 8581447 8582237 -20422419 + ROO_I LTR Pao 6775 7564 -692 8 650 6439 20 2 8 chrUextra 8582337 8583127 -20421529 + R1_DM LINE R1 4178 4963 -393 8 650 899 0 0 0 chrUextra 8583227 8583331 -20421325 + 5S_DM RNA RNA 32 135 0 8 650 1104 0 0 56 chrUextra 8583572 8583715 -20420941 + 5S_DM RNA RNA 1 135 0 8 650 549 0 0 0 chrUextra 8583953 8584017 -20420639 + 5S_DM RNA RNA 1 64 -71 8 650 3294 176 17 9 chrUextra 8584139 8584907 -20419749 - SAR_DM Satellite Satellite -396 1076 303 8 650 376 78 0 0 chrUextra 8585007 8585058 -20419598 + Gypsy6A_LTR LTR Gypsy 252 302 -118 8 650 34 24 0 0 chrUextra 8585285 8585326 -20419330 + AT_rich Low_complexity Low_complexity 1 41 0 8 650 6368 29 1 0 chrUextra 8585897 8586687 -20417969 - R1_DM LINE R1 -1740 3616 2826 8 650 5203 94 10 14 chrUextra 8586787 8587575 -20417081 + Gypsy12_I LTR Gypsy 1180 1964 -3582 8 650 3390 170 9 14 chrUextra 8587677 8588458 -20416198 - SAR_DM Satellite Satellite -501 971 195 8 650 23 33 0 0 chrUextra 8588852 8588882 -20415774 + AT_rich Low_complexity Low_complexity 1 30 0 8 650 507 173 15 8 chrUextra 8589076 8589210 -20415446 + PROTOP_B DNA P 314 448 -705 8 650 328 87 0 0 chrUextra 8589249 8589295 -20415361 - DNAREP1_DM LINE Penelope -199 395 350 8 650 1361 18 0 6 chrUextra 8589457 8589624 -20415032 + MICROPIA_LTR LTR Gypsy 311 476 0 8 650 3609 9 5 0 chrUextra 8589632 8590053 -20414603 + Invader1_LTR LTR Gypsy 1 423 0 8 650 1469 0 0 0 chrUextra 8590053 8590223 -20414433 + Copia2_LTR_DM LTR Copia 29 198 0 8 650 1681 291 47 12 chrUextra 8590357 8591129 -20413527 + MICROPIA_I LTR Gypsy 2417 3215 -1261 8 650 369 109 0 0 chrUextra 8591237 8591292 -20413364 + (TA)n Simple_repeat Simple_repeat 2 56 0 8 650 270 271 74 0 chrUextra 8591470 8591592 -20413064 + Invader6_I LTR Gypsy 1003 1133 -3343 8 650 935 307 14 17 chrUextra 8591575 8592006 -20412650 + Invader6_I LTR Gypsy 1682 2122 -1977 8 650 26 30 0 0 chrUextra 8592547 8592580 -20412076 + AT_rich Low_complexity Low_complexity 1 33 0 8 650 6311 30 10 0 chrUextra 8593017 8593807 -20410849 - R1_DM LINE R1 -72 5284 4487 8 650 921 125 0 6 chrUextra 8593913 8594090 -20410566 + DM297_I LTR Gypsy 4559 4734 -1433 8 650 1019 146 0 5 chrUextra 8594088 8594281 -20410375 + DM297_I LTR Gypsy 5490 5681 -486 8 650 766 140 0 53 chrUextra 8594280 8594431 -20410225 + DM176_I LTR Gypsy 6278 6420 0 8 650 6346 24 14 1 chrUextra 8594799 8595587 -20409069 - R1_DM LINE R1 -1027 4329 3532 8 650 6742 1 1 4 chrUextra 8595687 8596475 -20408181 + LSU-rRNA_Dme rRNA rRNA 760 1545 -2355 8 650 3366 183 8 9 chrUextra 8596577 8597361 -20407295 - SAR_DM Satellite Satellite -444 1028 246 8 650 272 109 0 0 chrUextra 8597321 8597367 -20407289 + ARS406_DM Unknown Unknown 1 46 -307 8 650 3121 184 27 14 chrUextra 8597467 8598252 -20406404 - SAR_DM Satellite Satellite -454 1018 224 8 650 5510 29 10 51 chrUextra 8598357 8599147 -20405509 - BATUMI_I LTR Pao -4796 3167 2410 8 650 3270 185 11 18 chrUextra 8599248 8600036 -20404620 + SAR_DM Satellite Satellite 377 1159 -313 8 650 6794 5 0 0 chrUextra 8600137 8600927 -20403729 - PROTOP DNA P -1111 3369 2580 8 650 1241 122 38 61 chrUextra 8601027 8601288 -20403368 + R1_DM LINE R1 451 705 -4651 8 650 3636 102 2 2 chrUextra 8601288 8601817 -20402839 + R1_DM LINE R1 1099 1627 -3729 8 650 5243 57 31 4 chrUextra 8601918 8602693 -20401963 + TART LINE telomeric 2290 3085 -11392 8 650 6213 23 23 1 chrUextra 8602807 8603597 -20401059 - STALKER4_I LTR Gypsy -3371 3159 2353 8 650 6401 27 4 0 chrUextra 8603698 8604487 -20400169 - R1_DM LINE R1 -1853 3503 2712 8 650 1900 69 81 0 chrUextra 8604587 8604909 -20399747 - PROTOP DNA P -3723 757 421 8 650 3131 66 49 2 chrUextra 8604909 8605377 -20399279 - PROTOP_A DNA P 0 1105 616 8 650 1328 39 0 4 chrUextra 8605477 8605708 -20398948 + (ATCG)n Simple_repeat Simple_repeat 1 230 0 8 650 221 104 21 0 chrUextra 8605708 8605725 -20398931 + (CGAT)n Simple_repeat Simple_repeat 3 19 0 8 650 1171 62 0 11 chrUextra 8605725 8605905 -20398751 + (TCTA)n Simple_repeat Simple_repeat 3 180 0 8 650 221 104 21 0 chrUextra 8605905 8605935 -20398721 + (CGAT)n Simple_repeat Simple_repeat 4 33 0 8 650 1185 73 0 0 chrUextra 8605935 8606267 -20398389 + (TCTA)n Simple_repeat Simple_repeat 1 332 0 8 650 256 98 0 0 chrUextra 8606367 8606408 -20398248 - PROTOP DNA P -4222 258 218 8 650 209 125 0 24 chrUextra 8606729 8606791 -20397865 + (TAAA)n Simple_repeat Simple_repeat 1 60 0 8 650 3040 6 6 0 chrUextra 8606791 8607157 -20397499 + QUASIMODO_LTR LTR Gypsy 1 368 -290 8 650 3051 190 21 20 chrUextra 8607257 8608047 -20396609 + SAR_DM Satellite Satellite 419 1209 -263 8 650 3254 205 10 11 chrUextra 8609037 8609827 -20394829 - DM412 LTR Gypsy -2058 4839 4051 8 650 6396 25 6 0 chrUextra 8609928 8610717 -20393939 + R1_DM LINE R1 1431 2224 -3132 8 650 3240 177 16 18 chrUextra 8610818 8611605 -20393051 + SAR_DM Satellite Satellite 334 1119 -353 8 650 254 286 0 0 chrUextra 8611758 8611828 -20392828 - Gypsy2_I LTR Gypsy -91 6044 5975 8 650 393 211 0 0 chrUextra 8611837 8611913 -20392743 - Gypsy3_I LTR Gypsy -172 6005 5930 8 650 2931 242 7 3 chrUextra 8611879 8612497 -20392159 - Gypsy2_I LTR Gypsy -174 5961 5342 8 650 6912 19 10 1 chrUextra 8612597 8613387 -20391269 - R1_DM LINE R1 -2922 2434 1638 8 650 5133 82 20 9 chrUextra 8613491 8614277 -20390379 + R1_DM LINE R1 3456 4043 -1313 8 650 2799 170 16 6 chrUextra 8614391 8614955 -20389701 + SAR_DM Satellite Satellite 1 751 -613 8 650 1376 85 0 0 chrUextra 8614955 8615144 -20389512 - ARS406_DM Unknown Unknown -164 189 1 8 650 2799 170 16 6 chrUextra 8615144 8615165 -20389491 + SAR_DM Satellite Satellite 752 781 -583 8 650 7406 1 0 0 chrUextra 8615267 8616057 -20388599 - HOBO DNA hAT -2126 890 101 8 650 6989 13 2 1 chrUextra 8616157 8616947 -20387709 + R1_DM LINE R1 3873 4663 -693 8 650 6539 43 5 1 chrUextra 8617047 8617836 -20386820 + R1_DM LINE R1 1055 1846 -3510 8 650 6086 16 0 7 chrUextra 8617936 8618641 -20386015 + MICROPIA_I LTR Gypsy 3777 4476 0 8 650 753 0 0 0 chrUextra 8618641 8618725 -20385931 + MICROPIA_LTR LTR Gypsy 1 84 -392 8 650 2189 159 88 39 chrUextra 8619115 8619605 -20385051 + DNAREP1_DM LINE Penelope 1 514 -80 8 650 2107 4 0 0 chrUextra 8620603 8620832 -20383824 - STALKER4_LTR LTR Gypsy -173 229 1 8 650 4218 43 7 4 chrUextra 8620832 8621392 -20383264 - STALKER4_I LTR Gypsy 0 6530 5969 8 650 3645 173 11 19 chrUextra 8621493 8622275 -20382381 - SAR_DM Satellite Satellite -371 1101 326 8 650 3743 60 52 2 chrUextra 8622381 8622916 -20381740 + PROTOP DNA P 192 753 -3727 8 650 1194 48 7 7 chrUextra 8622922 8623069 -20381587 + PROTOP DNA P 4334 4480 0 8 650 3225 186 54 14 chrUextra 8623270 8624054 -20380602 - SAR_DM Satellite Satellite -262 1210 396 8 650 5206 34 11 0 chrUextra 8624159 8624773 -20379883 - FW_DM LINE Jockey -4071 621 1 8 650 1422 42 0 0 chrUextra 8624781 8624948 -20379708 + R1_DM LINE R1 1377 1543 -3813 8 650 6847 20 1 1 chrUextra 8625048 8625837 -20378819 + R1_DM LINE R1 3585 4373 -983 8 650 294 91 0 43 chrUextra 8626328 8626374 -20378282 + DNAREP1_DM LINE Penelope 2 45 -549 8 650 967 172 82 36 chrUextra 8626396 8626726 -20377930 + DNAREP1_DM LINE Penelope 89 359 -235 8 650 936 9 0 27 chrUextra 8626836 8626948 -20377708 + NTS_DM Other Other 25 133 -107 8 650 1320 18 0 12 chrUextra 8626948 8627114 -20377542 + NTS_DM Other Other 38 201 -39 8 650 936 9 0 27 chrUextra 8627166 8627278 -20377378 + NTS_DM Other Other 25 133 -107 8 650 1350 18 0 6 chrUextra 8627278 8627443 -20377213 + NTS_DM Other Other 38 201 -39 8 650 936 9 0 27 chrUextra 8627495 8627607 -20377049 + NTS_DM Other Other 25 133 -107 8 650 6891 19 1 1 chrUextra 8627715 8628504 -20376152 - R1_DM LINE R1 -860 4496 3708 8 650 5989 26 0 39 chrUextra 8628604 8629393 -20375263 - DM176_I LTR Gypsy -5465 955 198 8 650 5804 89 37 13 chrUextra 8629493 8630282 -20374374 - Gypsy12_I LTR Gypsy -80 5466 4659 8 650 2038 298 16 25 chrUextra 8630387 8631161 -20373495 - FROGGER_I LTR Copia -805 1272 506 8 650 7319 0 1 0 chrUextra 8631271 8632060 -20372596 - TART LINE telomeric -10663 3814 3025 8 650 2727 84 66 22 chrUextra 8632160 8632931 -20371725 - DMSAT6 Satellite Satellite -91 805 1 8 650 3269 22 0 0 chrUextra 8633049 8633411 -20371245 + Invader6_LTR LTR Gypsy 32 393 0 8 650 3923 9 0 0 chrUextra 8633411 8633838 -20370818 + Invader6_I LTR Gypsy 1 427 -3672 8 650 3394 129 78 37 chrUextra 8633939 8634727 -20369929 + STALKER4_I LTR Gypsy 385 1253 -5277 8 650 5876 71 14 0 chrUextra 8634827 8635616 -20369040 + STALKER4_I LTR Gypsy 2626 3425 -3105 8 650 3410 184 15 41 chrUextra 8635716 8636500 -20368156 + SAR_DM Satellite Satellite 1 763 -205 8 650 6560 41 1 1 chrUextra 8636605 8637394 -20367262 - R1_DM LINE R1 -3841 1515 727 8 650 222 37 0 0 chrUextra 8637881 8637908 -20366748 + (T)n Simple_repeat Simple_repeat 1 27 0 8 650 6849 16 1 2 chrUextra 8638383 8639172 -20365484 + R1_DM LINE R1 3469 4256 -1100 8 650 7176 0 0 0 chrUextra 8639272 8640061 -20364595 - MDG3_I LTR Gypsy -543 4443 3655 8 650 3560 194 13 25 chrUextra 8640161 8640950 -20363706 - SAR_DM Satellite Satellite -542 779 1 8 650 6948 20 0 0 chrUextra 8641050 8641839 -20362817 + ROO_I LTR Pao 1297 2085 -6171 8 650 3219 177 29 19 chrUextra 8641944 8642697 -20361959 - SAR_DM Satellite Satellite -514 958 198 8 650 582 122 51 25 chrUextra 8642610 8642728 -20361928 + ARS406_DM Unknown Unknown 1 121 -232 8 650 1128 131 155 79 chrUextra 8643082 8643505 -20361151 + IDEFIX_LTR LTR Gypsy 1 504 -90 8 650 850 36 0 18 chrUextra 8643505 8643617 -20361039 - CIRCE LINE Composite -1500 4856 4747 8 650 4765 2 0 4 chrUextra 8643717 8644232 -20360424 - R2_DM LINE R2 -27 3580 3068 8 650 2573 7 0 3 chrUextra 8644221 8644506 -20360150 - LSU-rRNA_Dme rRNA rRNA -1321 2579 2296 8 650 6222 47 67 1 chrUextra 8644606 8645395 -20359261 + Baggins1 LINE LOA 4365 5205 -248 8 650 2680 94 13 19 chrUextra 8645495 8646275 -20358381 - DMSAT6 Satellite Satellite -72 774 1 8 650 1350 18 0 6 chrUextra 8646388 8646553 -20358103 + NTS_DM Other Other 38 201 -39 8 650 936 9 0 27 chrUextra 8646605 8646717 -20357939 + NTS_DM Other Other 25 133 -107 8 650 1537 20 20 20 chrUextra 8646717 8646920 -20357736 + NTS_DM Other Other 38 240 0 8 650 1873 21 17 17 chrUextra 8646920 8647160 -20357496 + NTS_DM Other Other 1 240 0 8 650 6795 23 0 1 chrUextra 8647273 8648062 -20356594 + FW_DM LINE Jockey 2640 3427 -1265 8 650 3436 187 32 10 chrUextra 8648162 8648950 -20355706 + SAR_DM Satellite Satellite 387 1191 -281 8 650 994 36 0 0 chrUextra 8649051 8649163 -20355493 + PROTOP DNA P 4369 4480 0 8 650 27 81 0 0 chrUextra 8649511 8649573 -20355083 + AT_rich Low_complexity Low_complexity 1 62 0 8 650 29 47 0 0 chrUextra 8649619 8649662 -20354994 + AT_rich Low_complexity Low_complexity 1 43 0 8 650 21 89 0 0 chrUextra 8649700 8649756 -20354900 + AT_rich Low_complexity Low_complexity 1 56 0 8 650 6148 48 38 2 chrUextra 8649940 8650729 -20353927 + R1_DM LINE R1 598 1414 -3942 8 651 4010 179 13 29 chrUextra 8650845 8651617 -20353039 - HETA LINE telomeric -2431 3650 2891 8 651 6656 28 28 0 chrUextra 8651718 8652507 -20352149 + R1_DM LINE R1 2710 3520 -1836 8 651 3706 121 38 85 chrUextra 8652607 8653396 -20351260 - PROTOP_B DNA P -81 1072 321 8 651 634 179 8 25 chrUextra 8653507 8653627 -20351029 - TAHRE LINE telomeric -687 9776 9659 8 651 1507 193 74 98 chrUextra 8654385 8654964 -20349692 - TART LINE telomeric -6928 7549 6985 8 651 474 67 77 39 chrUextra 8654954 8655032 -20349624 - TART LINE telomeric -3805 10672 10592 8 651 1096 42 14 7 chrUextra 8655030 8655174 -20349482 - TART LINE telomeric -3814 10663 10519 8 651 7196 0 0 2 chrUextra 8655274 8656063 -20348593 - ROO_I LTR Pao -2604 5652 4866 8 651 3517 211 50 21 chrUextra 8656163 8657841 -20346815 - SAR_DM Satellite Satellite -602 1726 1 8 651 22 56 0 0 chrUextra 8657950 8657986 -20346670 + AT_rich Low_complexity Low_complexity 1 36 0 8 651 278 176 0 19 chrUextra 8657999 8658051 -20346605 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 8 651 268 196 0 19 chrUextra 8658082 8658134 -20346522 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 8 651 268 196 0 19 chrUextra 8658174 8658226 -20346430 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 8 651 268 196 0 19 chrUextra 8658266 8658318 -20346338 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 8 651 2861 3 0 0 chrUextra 8658419 8658728 -20345928 - LSU-rRNA_Dme rRNA rRNA 0 3900 3592 8 651 3409 192 12 12 chrUextra 8658830 8659608 -20345048 - SAR_DM Satellite Satellite -515 957 180 8 651 4748 2 0 4 chrUextra 8659719 8660238 -20344418 - POGO DNA Pogo -711 1410 894 8 651 2518 0 0 0 chrUextra 8660235 8660508 -20344148 + BEL_I LTR Pao 1322 1594 -3810 8 651 45 0 0 0 chrUextra 8660610 8660655 -20344001 + AT_rich Low_complexity Low_complexity 1 45 0 8 651 3037 210 26 3 chrUextra 8660701 8661394 -20343262 - DM412 LTR Gypsy -324 6573 5865 8 651 387 0 0 0 chrUextra 8661497 8661540 -20343116 + Invader1_LTR LTR Gypsy 381 423 0 8 651 2495 128 124 73 chrUextra 8661576 8662182 -20342474 - HMSBEAGLE_I LTR Gypsy -5891 638 2 8 651 479 198 10 19 chrUextra 8662183 8662286 -20342370 - DMLTR5 LTR Gypsy -4 262 161 8 651 7332 0 1 1 chrUextra 8662386 8663175 -20341481 + MDG3_I LTR Gypsy 650 1438 -3548 8 651 5770 68 34 8 chrUextra 8663275 8664063 -20340593 + QUASIMODO_I LTR Gypsy 578 1386 -4674 8 651 3576 180 11 13 chrUextra 8664169 8664929 -20339727 - SAR_DM Satellite Satellite -535 937 180 8 651 899 92 0 0 chrUextra 8664823 8664953 -20339703 + ARS406_DM Unknown Unknown 1 130 -223 8 651 2575 84 7 36 chrUextra 8665941 8666692 -20337964 - DMSAT6 Satellite Satellite -59 728 1 8 651 508 208 0 65 chrUextra 8667065 8667235 -20337421 - Gypsy8_I LTR Gypsy -4123 224 66 8 651 246 152 13 132 chrUextra 8667342 8667418 -20337238 - Gypsy8_LTR LTR Gypsy -237 67 1 8 651 6404 29 1 0 chrUextra 8667717 8668505 -20336151 - R1_DM LINE R1 -1836 3520 2732 8 651 6236 7 12 0 chrUextra 8668605 8669341 -20335315 + DMRT1B LINE R1 4436 5180 -3 8 651 468 0 0 0 chrUextra 8669341 8669393 -20335263 + (CACAA)n Simple_repeat Simple_repeat 4 55 0 8 651 2281 3 0 0 chrUextra 8669493 8669777 -20334879 + I_DM LINE I 5181 5464 -767 8 651 2705 6 80 8 chrUextra 8669766 8670281 -20334375 - LSU-rRNA_Dme rRNA rRNA -994 2906 2355 8 651 5827 18 6 0 chrUextra 8671269 8671983 -20332673 + PROTOP_A DNA P 388 1105 0 8 651 652 0 0 0 chrUextra 8671983 8672057 -20332599 + CIRCE LINE Composite 2424 2497 -3859 8 651 475 187 0 0 chrUextra 8672157 8672264 -20332392 - STALKER4_I LTR Gypsy -6189 341 235 8 651 31 58 0 0 chrUextra 8672265 8672317 -20332339 + AT_rich Low_complexity Low_complexity 1 52 0 8 651 3155 54 2 14 chrUextra 8672405 8672844 -20331812 - STALKER4_LTR LTR Gypsy -10 392 1 8 651 549 101 10 20 chrUextra 8672844 8672945 -20331711 + DMSAT6 Satellite Satellite 291 390 -80 8 651 6385 27 5 0 chrUextra 8673046 8673833 -20330823 + R1_DM LINE R1 1445 2235 -3121 8 651 1348 6 0 0 chrUextra 8673933 8674106 -20330550 + STALKER4_I LTR Gypsy 6358 6530 0 8 651 3419 2 0 5 chrUextra 8674106 8674510 -20330146 + STALKER4_LTR LTR Gypsy 1 402 0 8 651 1207 284 48 32 chrUextra 8674823 8675580 -20329076 + SAR_DM Satellite Satellite 352 1120 -352 8 651 6290 18 15 4 chrUextra 8675709 8676497 -20328159 - NINJA_I LTR Pao -314 5697 4901 8 651 3251 179 7 8 chrUextra 8676604 8677346 -20327310 - SAR_DM Satellite Satellite -535 937 197 8 651 846 92 0 0 chrUextra 8677255 8677385 -20327271 + ARS406_DM Unknown Unknown 1 130 -223 8 651 1996 8 4 0 chrUextra 8677485 8677733 -20326923 + Copia_LTR LTR Copia 28 276 0 8 651 26 30 0 0 chrUextra 8677742 8677775 -20326881 + AT_rich Low_complexity Low_complexity 1 33 0 8 651 21 57 0 0 chrUextra 8677821 8677856 -20326800 + AT_rich Low_complexity Low_complexity 1 35 0 8 651 21 89 0 0 chrUextra 8677894 8677950 -20326706 + AT_rich Low_complexity Low_complexity 1 56 0 8 651 1582 79 14 45 chrUextra 8678373 8678689 -20325967 - HETA LINE telomeric -5525 556 1 8 651 3259 82 4 4 chrUextra 8678682 8679159 -20325497 - HETA LINE telomeric 0 6081 5605 8 651 2336 159 77 25 chrUextra 8679261 8679810 -20324846 - Stalker2_I LTR Gypsy -6584 818 242 8 651 289 96 0 37 chrUextra 8679984 8680038 -20324618 - Stalker2_I LTR Gypsy -7350 52 1 8 651 1150 49 238 5 chrUextra 8681640 8681825 -20322831 + PROTOP DNA P 1 228 -4252 8 651 5356 21 52 0 chrUextra 8681925 8682713 -20321943 + R1_DM LINE R1 1771 2599 -2757 8 651 3396 173 8 8 chrUextra 8682832 8683583 -20321073 - SAR_DM Satellite Satellite -396 1076 326 8 651 3015 184 19 29 chrUextra 8683701 8684489 -20320167 + SAR_DM Satellite Satellite 436 1215 -257 8 651 3488 167 13 9 chrUextra 8684589 8685358 -20319298 - SAR_DM Satellite Satellite -455 1017 246 8 651 327 103 17 0 chrUextra 8685318 8685376 -20319280 + ARS406_DM Unknown Unknown 1 59 -294 8 651 4067 43 68 32 chrUextra 8685477 8686097 -20318559 - PROTOP_B DNA P -511 642 1 8 651 301 68 0 0 chrUextra 8686221 8686265 -20318391 + PROTOP_B DNA P 1 44 -1109 8 651 575 28 0 0 chrUextra 8686365 8686436 -20318220 + ARS406_DM Unknown Unknown 119 189 -164 8 651 3184 239 57 14 chrUextra 8686373 8688041 -20316615 - SAR_DM Satellite Satellite -242 1738 1 8 651 3070 45 9 16 chrUextra 8688141 8688573 -20316083 - BATUMI_I LTR Pao -1017 6946 6518 8 651 1175 271 15 3 chrUextra 8688584 8688921 -20315735 + TOM_I LTR Gypsy 628 968 -5144 8 651 2556 151 47 19 chrUextra 8689031 8689817 -20314839 - TART_B1 LINE telomeric -8313 2341 1117 8 651 2713 33 0 0 chrUextra 8689917 8690249 -20314407 - CIRCE LINE Composite -597 5759 5428 8 651 2147 85 77 35 chrUextra 8690329 8690705 -20313951 - CIRCE LINE Composite -929 5427 5036 8 651 5466 30 0 0 chrUextra 8690805 8691479 -20313177 - FW_DM LINE Jockey -4010 682 9 8 651 600 147 0 0 chrUextra 8691496 8691591 -20313065 - ROVER-I_DM LTR Gypsy -2795 3789 3695 8 651 1369 18 0 0 chrUextra 8691693 8691859 -20312797 - DMRT1A LINE R1 -627 4556 4391 8 651 5286 8 10 0 chrUextra 8691859 8692481 -20312175 - DMRT1A LINE R1 -2714 2469 1842 8 651 1285 29 105 0 chrUextra 8693197 8693369 -20311287 + PROTOP_B DNA P 1 190 -963 8 651 6739 1 0 0 chrUextra 8693469 8694257 -20310399 - G6_DM LINE Jockey -344 1698 911 8 651 1586 5 0 0 chrUextra 8694357 8694545 -20310111 - MICROPIA_LTR LTR Gypsy -288 188 1 8 651 4554 15 82 7 chrUextra 8694545 8695145 -20309511 - MICROPIA_I LTR Gypsy 0 4476 3832 8 651 5198 15 4 42 chrUextra 8695245 8695952 -20308704 - MDG3_I LTR Gypsy -2688 2298 1619 8 651 559 49 12 0 chrUextra 8695952 8696033 -20308623 - MDG3_I LTR Gypsy -3305 1681 1600 8 651 4012 12 48 0 chrUextra 8696133 8696627 -20308029 - ROO_I LTR Pao -6526 1730 1213 8 651 2461 24 0 0 chrUextra 8696627 8696921 -20307735 + PROTOP_A DNA P 1 294 -811 8 651 3227 176 18 22 chrUextra 8697021 8697809 -20306847 - SAR_DM Satellite Satellite -313 1159 375 8 651 6481 9 22 0 chrUextra 8697909 8698697 -20305959 - DMRT1B LINE R1 -70 5113 4309 8 651 6258 0 2 32 chrUextra 8698797 8699585 -20305071 + LSU-rRNA_Dme rRNA rRNA 120 884 -3016 8 651 6656 19 1 0 chrUextra 8699685 8700469 -20304187 - Gypsy6_I LTR Gypsy -1332 5680 4896 8 651 3204 236 37 24 chrUextra 8700573 8702241 -20302415 - SAR_DM Satellite Satellite -490 1690 1 8 651 2509 41 3 0 chrUextra 8703252 8703568 -20301088 + PROTOP_A DNA P 789 1105 0 8 651 26 30 0 0 chrUextra 8703943 8703976 -20300680 + AT_rich Low_complexity Low_complexity 1 33 0 8 651 1182 36 0 12 chrUextra 8704125 8704293 -20300363 - NTS_DM Other Other -37 203 38 8 651 817 0 0 0 chrUextra 8704293 8704389 -20300267 - NTS_DM Other Other -107 133 38 8 651 832 9 9 27 chrUextra 8704389 8704500 -20300156 - NTS_DM Other Other -107 133 25 8 651 21 57 0 0 chrUextra 8704526 8704561 -20300095 + AT_rich Low_complexity Low_complexity 1 35 0 8 651 1252 18 0 6 chrUextra 8704561 8704726 -20299930 - NTS_DM Other Other -39 201 38 8 651 852 18 0 27 chrUextra 8704726 8704838 -20299818 - NTS_DM Other Other -107 133 25 8 651 21 36 0 0 chrUextra 8704864 8704892 -20299764 + AT_rich Low_complexity Low_complexity 1 28 0 8 651 360 111 0 0 chrUextra 8705013 8705067 -20299589 + (CATA)n Simple_repeat Simple_repeat 3 56 0 8 651 1149 123 0 0 chrUextra 8705069 8705248 -20299408 + (TA)n Simple_repeat Simple_repeat 2 180 0 8 651 3899 6 0 61 chrUextra 8705248 8705754 -20298902 - MICROPIA_LTR LTR Gypsy -1 475 1 8 651 368 0 0 21 chrUextra 8705754 8705801 -20298855 - MICROPIA_I LTR Gypsy 0 4476 4431 8 651 5082 3 0 0 chrUextra 8705901 8706485 -20298171 + LSU-rRNA_Dme rRNA rRNA 1995 2578 -1322 8 651 1737 5 0 0 chrUextra 8706484 8706689 -20297967 + R2_DM LINE R2 605 809 -2798 8 651 3138 181 10 15 chrUextra 8706793 8707577 -20297079 + SAR_DM Satellite Satellite 1 780 -354 8 651 6535 23 0 0 chrUextra 8707677 8708465 -20296191 + R1_DM LINE R1 2001 2788 -2568 8 651 890 18 0 9 chrUextra 8708565 8708675 -20295981 - DM297_LTR LTR Gypsy -304 110 2 8 651 180 0 0 0 chrUextra 8708675 8708695 -20295961 + (TA)n Simple_repeat Simple_repeat 1 20 0 8 651 3150 0 0 0 chrUextra 8708695 8709061 -20295595 + ROVER-LTR_DM LTR Gypsy 2 367 0 8 651 2496 0 0 0 chrUextra 8709061 8709353 -20295303 + ROVER-I_DM LTR Gypsy 1 292 -6292 8 651 3404 205 10 6 chrUextra 8709453 8710240 -20294416 - Stalker2_I LTR Gypsy -2935 4467 3678 8 651 977 309 21 21 chrUextra 8710610 8711126 -20293530 - ACCORD_I LTR Gypsy -2113 4175 3660 8 651 796 82 0 0 chrUextra 8711229 8711351 -20293305 - ARS406_DM Unknown Unknown -231 122 1 8 651 3250 172 13 13 chrUextra 8711245 8712003 -20292653 + SAR_DM Satellite Satellite 180 937 -535 8 651 5870 47 13 1 chrUextra 8712117 8712905 -20291751 - R1_DM LINE R1 -4185 1171 375 8 651 6888 0 1 0 chrUextra 8713006 8713790 -20290866 + LSU-rRNA_Dme rRNA rRNA 2919 3703 -197 8 651 6495 20 1 0 chrUextra 8713895 8714681 -20289975 + R1_DM LINE R1 1504 2290 -3066 8 651 3312 87 13 4 chrUextra 8715686 8716208 -20288448 + CIRCE LINE Composite 4454 4980 -1376 8 651 2709 160 48 19 chrUextra 8716565 8717197 -20287459 + TART LINE telomeric 8941 9590 -4887 8 651 664 178 0 8 chrUextra 8717215 8717345 -20287311 + HETA LINE telomeric 4491 4619 -1462 8 651 4320 2 0 47 chrUextra 8717445 8717998 -20286658 - LSU-rRNA_Dme rRNA rRNA -3373 527 1 8 651 21 95 0 0 chrUextra 8718010 8718073 -20286583 + AT_rich Low_complexity Low_complexity 1 63 0 8 651 767 11 0 0 chrUextra 8718333 8718424 -20286232 + R1_DM LINE R1 4192 4282 -1074 8 651 5163 29 14 3 chrUextra 8718444 8719097 -20285559 + R1_DM LINE R1 4407 5066 -290 8 651 3190 176 13 13 chrUextra 8719226 8719993 -20284663 - SAR_DM Satellite Satellite -514 958 192 8 651 693 107 0 0 chrUextra 8719897 8720009 -20284647 + ARS406_DM Unknown Unknown 1 112 -241 8 651 6402 25 9 0 chrUextra 8720111 8720897 -20283759 + R1_DM LINE R1 4555 5347 -9 8 651 6640 20 0 0 chrUextra 8720997 8721785 -20282871 - DIVER_I LTR Pao -2691 2952 2165 8 651 2160 189 74 28 chrUextra 8721891 8722673 -20281983 - TART LINE telomeric -4920 9557 8967 8 651 3297 186 9 8 chrUextra 8722774 8723548 -20281108 + SAR_DM Satellite Satellite 282 1056 -416 8 651 35 63 0 0 chrUextra 8723719 8723782 -20280874 + AT_rich Low_complexity Low_complexity 1 63 0 8 651 27 29 0 0 chrUextra 8724321 8724355 -20280301 + AT_rich Low_complexity Low_complexity 1 34 0 8 651 3499 40 64 2 chrUextra 8724619 8725101 -20279555 + PROTOP DNA P 1 512 -3968 8 651 28 71 0 0 chrUextra 8725240 8725296 -20279360 + AT_rich Low_complexity Low_complexity 1 56 0 8 651 687 149 32 57 chrUextra 8725489 8725646 -20279010 - Gypsy5_LTR LTR Gypsy -201 229 77 8 651 583 73 0 0 chrUextra 8725650 8725732 -20278924 - Jockey2 LINE Jockey -3346 82 1 8 651 1014 183 32 68 chrUextra 8725863 8726203 -20278453 - Gypsy_LTR LTR Gypsy -51 431 104 8 651 2163 8 0 0 chrUextra 8726321 8726570 -20278086 - DMLTR5 LTR Gypsy -17 249 1 8 651 4332 22 11 7 chrUextra 8726570 8727108 -20277548 - ACCORD2_I LTR Gypsy -6128 1084 545 8 651 3288 189 9 8 chrUextra 8727211 8727990 -20276666 + SAR_DM Satellite Satellite 282 1061 -411 8 651 4592 16 0 0 chrUextra 8728095 8728649 -20276007 + PROTOP DNA P 3927 4480 0 8 651 1094 8 0 0 chrUextra 8728650 8728783 -20275873 + QUASIMODO_I LTR Gypsy 1567 1699 -4361 8 651 5639 22 13 0 chrUextra 8728984 8729668 -20274988 + CIRCE LINE Composite 5664 6356 0 8 651 806 30 0 0 chrUextra 8729668 8729769 -20274887 + CIRCE LINE Composite 1 101 -6255 8 651 1900 0 0 5 chrUextra 8729901 8730124 -20274532 - LSU-rRNA_Dme rRNA rRNA -3678 222 1 8 651 21 95 0 0 chrUextra 8730136 8730199 -20274457 + AT_rich Low_complexity Low_complexity 1 63 0 8 651 34 24 0 0 chrUextra 8730412 8730453 -20274203 + AT_rich Low_complexity Low_complexity 1 41 0 8 651 1378 33 0 0 chrUextra 8730756 8730936 -20273720 - PROTOP_A DNA P -729 376 197 8 651 4106 93 2 7 chrUextra 8730937 8731543 -20273113 + R1_DM LINE R1 720 1322 -4034 8 651 3064 197 24 22 chrUextra 8731644 8732425 -20272231 + SAR_DM Satellite Satellite 1 782 -203 8 651 21 36 0 0 chrUextra 8732539 8732567 -20272089 + AT_rich Low_complexity Low_complexity 1 28 0 8 651 2959 52 18 0 chrUextra 8732851 8733239 -20271417 - BS2 LINE Jockey -1605 3116 2722 8 651 268 222 0 0 chrUextra 8733239 8733302 -20271354 + Copia_I LTR Copia 1976 2038 -2555 8 651 2830 208 11 19 chrUextra 8733417 8734203 -20270453 - SAR_DM Satellite Satellite -268 1204 425 8 651 6690 5 1 0 chrUextra 8734304 8735091 -20269565 - DM297_I LTR Gypsy -3183 2984 2197 8 651 22 56 0 0 chrUextra 8735281 8735317 -20269339 + AT_rich Low_complexity Low_complexity 1 36 0 8 651 366 183 75 19 chrUextra 8735363 8735469 -20269187 + Copia_I LTR Copia 4402 4513 -80 8 651 26 0 0 0 chrUextra 8736830 8736856 -20267800 + AT_rich Low_complexity Low_complexity 1 26 0 8 651 3418 183 8 9 chrUextra 8736969 8737752 -20266904 + SAR_DM Satellite Satellite 224 1005 -467 8 651 28 48 0 0 chrUextra 8738060 8738102 -20266554 + AT_rich Low_complexity Low_complexity 1 42 0 8 651 488 119 36 0 chrUextra 8738375 8738459 -20266197 - NTS_DM Other Other -150 90 4 8 651 414 15 0 43 chrUextra 8738569 8738639 -20266017 - NTS_DM Other Other -78 162 96 8 651 6510 20 0 0 chrUextra 8738739 8739523 -20265133 + FW_DM LINE Jockey 649 1432 -3260 8 651 6727 6 1 0 chrUextra 8739626 8740413 -20264243 - Gypsy4_I LTR Gypsy -4547 1741 954 8 651 2935 205 14 20 chrUextra 8740513 8741300 -20263356 + SAR_DM Satellite Satellite 1 782 -227 8 651 1819 96 99 29 chrUextra 8741400 8741744 -20262912 - BATUMI_I LTR Pao -7595 368 1 8 651 2000 32 7 31 chrUextra 8741744 8742034 -20262622 - BATUMI_I LTR Pao -679 7284 7002 8 651 5843 43 28 1 chrUextra 8742287 8743071 -20261585 + TART LINE telomeric 2008 2812 -11665 8 651 5728 44 29 1 chrUextra 8743181 8743939 -20260717 + R1_DM LINE R1 681 1459 -3897 8 651 6836 0 1 2 chrUextra 8744061 8744848 -20259808 - LSU-rRNA_Dme rRNA rRNA -130 3770 2985 8 651 5911 37 1 5 chrUextra 8744948 8745735 -20258921 - R1_DM LINE R1 -4180 1176 393 8 651 3127 13 0 0 chrUextra 8745835 8746207 -20258449 - Gypsy4_I LTR Gypsy -5543 745 374 8 651 920 70 8 20 chrUextra 8746732 8747509 -20257147 - RSP Satellite Satellite 0 767 1 8 651 198 0 0 0 chrUextra 8747657 8747679 -20256977 + (CAA)n Simple_repeat Simple_repeat 2 23 0 8 651 1167 111 78 0 chrUextra 8749061 8749278 -20255378 + DNAREP1_DM LINE Penelope 1 234 -360 8 651 3301 225 17 27 chrUextra 8749383 8751052 -20253604 + SAR_DM Satellite Satellite 1 1651 -396 8 651 3916 96 0 0 chrUextra 8751157 8751708 -20252948 + Gypsy12_I LTR Gypsy 3167 3717 -1829 8 651 1702 85 0 0 chrUextra 8751707 8751943 -20252713 + Gypsy12_I LTR Gypsy 3511 3746 -1800 8 651 4288 30 97 0 chrUextra 8752044 8752829 -20251827 + DMCR1A LINE CR1 2314 3174 -1296 8 651 6729 2 0 0 chrUextra 8753818 8754604 -20250052 + FW_DM LINE Jockey 1017 1802 -2890 8 651 2381 96 9 33 chrUextra 8754711 8755492 -20249164 + DMSAT6 Satellite Satellite 1 762 -256 8 651 712 105 0 103 chrUextra 8755609 8755938 -20248718 + GA-rich Low_complexity Low_complexity 1 294 0 8 651 1380 47 0 0 chrUextra 8756479 8756651 -20248005 + (TTCTC)n Simple_repeat Simple_repeat 1 172 0 8 651 1188 7 0 0 chrUextra 8757366 8757509 -20247147 + DM1731_I LTR Copia 3834 3976 0 8 651 2644 42 0 0 chrUextra 8757509 8757845 -20246811 + DM1731_LTR LTR Copia 1 336 0 8 651 551 0 133 4 chrUextra 8757845 8758117 -20246539 + (TA)n Simple_repeat Simple_repeat 1 307 0 8 651 34 0 0 0 chrUextra 8758119 8758153 -20246503 + AT_rich Low_complexity Low_complexity 1 34 0 8 651 6765 4 0 0 chrUextra 8758253 8759040 -20245616 + FW_DM LINE Jockey 827 1613 -3079 8 651 3860 110 24 61 chrUextra 8759159 8759925 -20244731 + Gypsy8_I LTR Gypsy 1035 1649 -2698 8 651 4437 76 48 25 chrUextra 8760914 8761700 -20242956 - STALKER4_I LTR Gypsy -4977 1553 750 8 651 2354 84 13 61 chrUextra 8761804 8762588 -20242068 - DMSAT6 Satellite Satellite -25 746 1 8 651 6402 23 0 5 chrUextra 8762688 8763475 -20241181 + FW_DM LINE Jockey 3687 4469 -223 8 651 4342 2 0 0 chrUextra 8763575 8764074 -20240582 + QUASIMODO_LTR LTR Gypsy 160 658 0 8 651 491 87 0 0 chrUextra 8764080 8764149 -20240507 + ROVER-LTR_DM LTR Gypsy 73 141 -226 8 651 324 179 25 13 chrUextra 8764241 8764320 -20240336 + ROVER-I_DM LTR Gypsy 1 80 -6504 8 651 3190 184 41 22 chrUextra 8764474 8765245 -20239411 - SAR_DM Satellite Satellite -540 785 1 8 651 5921 36 15 0 chrUextra 8765349 8766136 -20238520 + MDG1_I LTR Gypsy 4713 5511 -1085 8 651 6616 1 1 0 chrUextra 8766239 8767021 -20237635 + LSU-rRNA_Dme rRNA rRNA 229 1011 -2889 8 651 919 18 0 0 chrUextra 8767123 8767233 -20237423 - DM176_I LTR Gypsy -6310 110 1 8 651 1108 22 0 0 chrUextra 8767233 8767370 -20237286 - DM176_LTR LTR Gypsy 0 507 371 8 651 3961 10 56 0 chrUextra 8767373 8767910 -20236746 - PROTOP_A DNA P -376 729 163 8 651 2238 175 15 6 chrUextra 8768010 8768775 -20235881 - SAR_DM Satellite Satellite -549 771 1 8 651 327 103 17 0 chrUextra 8768724 8768782 -20235874 + ARS406_DM Unknown Unknown 1 59 -294 8 651 3012 189 18 28 chrUextra 8768897 8769683 -20234973 + SAR_DM Satellite Satellite 434 1211 -261 8 651 603 67 0 0 chrUextra 8769784 8769873 -20234783 + (GAGAA)n Simple_repeat Simple_repeat 2 90 0 8 651 1620 0 0 0 chrUextra 8769892 8770252 -20234404 + (CGAGA)n Simple_repeat Simple_repeat 1 360 0 8 651 1341 0 0 0 chrUextra 8770252 8770401 -20234255 + (CAAGA)n Simple_repeat Simple_repeat 1 149 0 8 651 1539 0 0 0 chrUextra 8770401 8770571 -20234085 + (TTGTG)n Simple_repeat Simple_repeat 3 173 0 8 651 1343 36 0 0 chrUextra 8770671 8770836 -20233820 + R1_DM LINE R1 5192 5356 0 8 651 4288 68 3 3 chrUextra 8770869 8771458 -20233198 + R1_DM LINE R1 1 589 -4767 8 651 338 300 7 7 chrUextra 8771990 8772131 -20232525 + Invader3_I LTR Gypsy 2889 3029 -1859 8 651 6010 28 4 3 chrUextra 8772481 8773231 -20231425 - R1_DM LINE R1 0 5356 4606 8 651 31 58 0 0 chrUextra 8773389 8773441 -20231215 + AT_rich Low_complexity Low_complexity 1 52 0 8 651 3146 48 4 14 chrUextra 8773529 8773967 -20230689 - STALKER4_LTR LTR Gypsy -3 399 1 8 651 2977 5 8 8 chrUextra 8774219 8774589 -20230067 + DM297_LTR LTR Gypsy 45 414 0 8 651 782 203 28 9 chrUextra 8775105 8775319 -20229337 - SAR_DM Satellite Satellite -716 756 539 8 651 871 184 28 20 chrUextra 8775330 8775579 -20229077 - SAR_DM Satellite Satellite -683 789 539 8 651 875 188 27 23 chrUextra 8775590 8775852 -20228804 - SAR_DM Satellite Satellite -683 789 527 8 651 3242 185 23 9 chrUextra 8775996 8776777 -20227879 + SAR_DM Satellite Satellite 228 1019 -453 8 651 1458 10 0 14 chrUextra 8776877 8777086 -20227570 + (TTCTC)n Simple_repeat Simple_repeat 1 205 0 8 651 1049 0 0 74 chrUextra 8777123 8777313 -20227343 + (TTCTC)n Simple_repeat Simple_repeat 2 177 0 8 651 232 0 91 36 chrUextra 8777358 8777413 -20227243 + (GA)n Simple_repeat Simple_repeat 1 58 0 8 651 565 155 53 8 chrUextra 8777416 8777663 -20226993 + GA-rich Low_complexity Low_complexity 1 257 0 8 651 6636 15 8 0 chrUextra 8779535 8780321 -20224335 + Copia2_I LTR Copia 1470 2261 -1901 8 651 6578 4 4 4 chrUextra 8780424 8781207 -20223449 - LSU-rRNA_Dme rRNA rRNA -2220 1680 898 8 81 6294 14 50 1 chrUextra 8781307 8782093 -20222563 - R1_DM LINE R1 -762 4594 3771 8 652 238 108 0 0 chrUextra 8782228 8782265 -20222391 + DNAREP1_DM LINE Penelope 1 37 -557 8 652 2954 40 5 3 chrUextra 8782284 8782662 -20221994 + STALKER4_LTR LTR Gypsy 1 379 -23 8 652 515 168 426 30 chrUextra 8782713 8782938 -20221718 + DNAREP1_DM LINE Penelope 50 364 -230 8 652 275 274 120 87 chrUextra 8783428 8783704 -20220952 - Invader1_LTR LTR Gypsy -55 368 84 8 652 231 154 0 0 chrUextra 8783965 8784004 -20220652 - NTS_DM Other Other -201 39 1 8 652 291 104 21 0 chrUextra 8784094 8784142 -20220514 - NTS_DM Other Other -191 49 1 8 652 357 159 53 38 chrUextra 8784142 8784273 -20220383 - NTS_DM Other Other 0 240 108 8 652 862 109 0 0 chrUextra 8784281 8784418 -20220238 - NTS_DM Other Other -103 137 1 8 652 280 104 21 0 chrUextra 8784508 8784556 -20220100 - NTS_DM Other Other -191 49 1 8 652 732 147 46 26 chrUextra 8784556 8784751 -20219905 - NTS_DM Other Other 0 240 42 8 652 4216 2 6 0 chrUextra 8785133 8785637 -20219019 - DOC LINE Jockey -3 4722 4216 8 652 28 48 0 0 chrUextra 8786666 8786708 -20217948 + AT_rich Low_complexity Low_complexity 1 42 0 8 652 32 0 0 0 chrUextra 8787036 8787068 -20217588 + AT_rich Low_complexity Low_complexity 1 32 0 8 652 1769 5 0 5 chrUextra 8787200 8787409 -20217247 + SSU-rRNA_Dme rRNA rRNA 1 208 -1787 8 652 5429 19 0 14 chrUextra 8787509 8788207 -20216449 - QUASIMODO_I LTR Gypsy -1654 4406 3719 8 652 491 45 0 0 chrUextra 8788228 8788295 -20216361 - QUASIMODO_I LTR Gypsy -2643 3417 3351 8 652 6898 0 0 0 chrUextra 8788395 8789181 -20215475 + GTWIN_I LTR Gypsy 3760 4545 -1876 8 652 4772 72 22 40 chrUextra 8790169 8790953 -20213703 + Gypsy10_I LTR Gypsy 58 827 -4451 8 652 2666 181 20 14 chrUextra 8791072 8791720 -20212936 + SAR_DM Satellite Satellite 425 1076 -396 8 652 480 136 87 0 chrUextra 8791735 8791838 -20212818 + SAR_DM Satellite Satellite 547 658 -814 8 652 22 0 0 0 chrUextra 8791939 8791961 -20212695 + AT_rich Low_complexity Low_complexity 1 22 0 8 652 198 107 54 0 chrUextra 8791964 8792020 -20212636 + (TA)n Simple_repeat Simple_repeat 1 59 0 8 652 88 41 0 0 chrUextra 8792020 8792143 -20212513 + AT_rich Low_complexity Low_complexity 1 123 0 8 652 238 134 44 15 chrUextra 8792143 8792211 -20212445 + (TA)n Simple_repeat Simple_repeat 1 70 0 8 652 142 33 0 0 chrUextra 8792212 8792396 -20212260 + AT_rich Low_complexity Low_complexity 1 184 0 8 652 261 188 38 38 chrUextra 8792396 8792569 -20212087 + (TTATA)n Simple_repeat Simple_repeat 1 173 0 8 652 34 0 0 0 chrUextra 8792574 8792608 -20212048 + AT_rich Low_complexity Low_complexity 1 34 0 8 652 238 134 44 15 chrUextra 8792608 8792676 -20211980 + (TA)n Simple_repeat Simple_repeat 1 70 0 8 652 41 21 0 0 chrUextra 8792677 8792725 -20211931 + AT_rich Low_complexity Low_complexity 1 48 0 8 652 6478 15 1 0 chrUextra 8792825 8793611 -20211045 + FW_DM LINE Jockey 2543 3329 -1363 8 652 351 216 0 10 chrUextra 8793711 8793814 -20210842 + XDMR_DM Unknown Unknown 259 360 0 8 652 3293 173 8 19 chrUextra 8793729 8794487 -20210169 - SAR_DM Satellite Satellite -354 1118 369 8 652 1563 170 6 0 chrUextra 8794599 8794923 -20209733 - SAR_DM Satellite Satellite -593 879 554 8 652 618 118 0 0 chrUextra 8794832 8794934 -20209722 + ARS406_DM Unknown Unknown 1 102 -251 8 652 2041 164 9 9 chrUextra 8794950 8795382 -20209274 - SAR_DM Satellite Satellite -425 1047 616 8 652 2840 175 9 12 chrUextra 8795483 8796269 -20208387 - SAR_DM Satellite Satellite -732 783 1 8 652 2281 19 0 0 chrUextra 8796369 8796640 -20208016 - PROTOP_A DNA P -834 271 1 8 652 4138 23 6 0 chrUextra 8796640 8797153 -20207503 + R1_DM LINE R1 2540 3055 -2301 8 652 2395 110 10 18 chrUextra 8797255 8798039 -20206617 - DMSAT6 Satellite Satellite -37 777 1 8 652 213 210 15 61 chrUextra 8798141 8798207 -20206449 + (CATATA)n Simple_repeat Simple_repeat 4 66 0 8 652 866 60 9 0 chrUextra 8798452 8798568 -20206088 + MAX_I LTR Pao 557 673 -7241 8 652 298 0 0 0 chrUextra 8798633 8798669 -20205987 + MAX_I LTR Pao 920 955 -6959 8 652 654 179 64 50 chrUextra 8798709 8798927 -20205729 + MAX_I LTR Pao 938 1158 -6756 8 652 2310 91 4 37 chrUextra 8799028 8799813 -20204843 + DMSAT6 Satellite Satellite 1 758 -28 8 652 4272 4 0 0 chrUextra 8799913 8800403 -20204253 - GTWIN_LTR LTR Gypsy -5 490 1 8 652 436 155 0 0 chrUextra 8800474 8800545 -20204111 - TAHRE LINE telomeric -2867 7596 7526 8 652 6304 20 0 0 chrUextra 8800799 8801585 -20203071 - PROTOP_A DNA P -185 920 135 8 652 6753 0 1 4 chrUextra 8801685 8802471 -20202185 - SSU-rRNA_Dme rRNA rRNA -617 1378 595 8 652 6068 16 3 1 chrUextra 8802576 8803357 -20201299 - Stalker2_I LTR Gypsy -1279 6123 5406 8 652 6740 1 0 0 chrUextra 8803457 8804243 -20200413 - DM412 LTR Gypsy -3979 2918 2133 8 652 625 37 0 0 chrUextra 8804343 8804425 -20200231 - ARS406_DM Unknown Unknown -182 171 90 8 652 602 37 0 0 chrUextra 8804422 8804503 -20200153 - ARS406_DM Unknown Unknown -195 158 78 8 652 2710 172 25 25 chrUextra 8804490 8805129 -20199527 + SAR_DM Satellite Satellite 408 1046 -426 8 652 5436 47 16 6 chrUextra 8805229 8806015 -20198641 - G_DM LINE Jockey -1061 981 204 8 652 6140 10 13 1 chrUextra 8806115 8806901 -20197755 + STALKER4_I LTR Gypsy 5686 6480 -50 8 652 3459 172 19 9 chrUextra 8807005 8807787 -20196869 - SAR_DM Satellite Satellite -435 1037 248 8 652 6355 25 0 0 chrUextra 8808773 8809557 -20195099 + NINJA_I LTR Pao 2106 2889 -3122 8 652 3747 196 5 5 chrUextra 8809660 8810445 -20194211 + ROVER-I_DM LTR Gypsy 3704 4488 -2096 8 652 867 207 147 60 chrUextra 8811437 8811817 -20192839 - HETA LINE telomeric -358 5723 5311 8 652 3114 177 18 16 chrUextra 8812317 8813103 -20191553 - SAR_DM Satellite Satellite -603 787 1 8 652 3329 242 0 0 chrUextra 8813220 8813988 -20190668 + Gypsy6_I LTR Gypsy 3302 4069 -2943 8 652 6598 9 5 2 chrUextra 8814089 8814875 -20189781 + IVK_DM LINE I 3431 4218 -1184 8 652 6650 0 0 0 chrUextra 8815863 8816647 -20188009 - ROO_I LTR Pao -130 8126 7343 8 652 5611 1 0 0 chrUextra 8816747 8817425 -20187231 + ROO_I LTR Pao 7579 8256 0 8 652 861 9 9 0 chrUextra 8817425 8817533 -20187123 + ROO_LTR LTR Pao 1 109 -319 8 652 6919 0 0 0 chrUextra 8817633 8818419 -20186237 - MAX_I LTR Pao -3624 4290 3505 8 652 5382 0 2 0 chrUextra 8818519 8819132 -20185524 + LSU-rRNA_Dme rRNA rRNA 3287 3900 0 8 652 22 56 0 0 chrUextra 8819204 8819240 -20185416 + AT_rich Low_complexity Low_complexity 1 36 0 8 652 6652 8 1 0 chrUextra 8819406 8820191 -20184465 - FW_DM LINE Jockey -1787 2905 2120 8 652 2429 154 114 13 chrUextra 8820296 8820898 -20183758 + TART LINE telomeric 8952 9590 -4887 8 652 6709 1 2 1 chrUextra 8821177 8821963 -20182693 + R1_DM LINE R1 1521 2307 -3049 8 652 1096 15 0 0 chrUextra 8822063 8822196 -20182460 + ROO_I LTR Pao 8124 8256 0 8 652 3580 19 2 0 chrUextra 8822196 8822623 -20182033 + ROO_LTR LTR Pao 1 428 0 8 652 1620 14 0 10 chrUextra 8822952 8823727 -20180929 + (ATAAG)n Simple_repeat Simple_repeat 1 767 0 8 652 6079 47 0 0 chrUextra 8823835 8824621 -20180035 - G2_DM LINE Jockey -1669 1433 648 8 652 6929 0 0 0 chrUextra 8824721 8825507 -20179149 - Gypsy2_I LTR Gypsy -2507 3628 2843 8 652 3056 190 15 23 chrUextra 8825607 8826393 -20178263 + SAR_DM Satellite Satellite 429 1208 -264 8 652 6639 4 4 3 chrUextra 8826495 8827279 -20177377 - LSU-rRNA_Dme rRNA rRNA -2220 1680 896 8 652 893 140 6 30 chrUextra 8827383 8827552 -20177104 - TART LINE telomeric -7328 7149 6985 8 652 437 45 88 15 chrUextra 8827552 8827620 -20177036 - TAHRE LINE telomeric -11 10452 10380 8 652 2051 165 167 20 chrUextra 8827617 8828156 -20176500 - HETA LINE telomeric 0 6081 5464 8 652 3207 192 6 9 chrUextra 8828272 8829051 -20175605 - SAR_DM Satellite Satellite -398 1074 298 8 652 398 162 31 93 chrUextra 8829378 8829507 -20175149 - R1_DM LINE R1 -338 5018 4898 8 652 348 286 70 18 chrUextra 8829765 8829936 -20174720 + Gypsy6_I LTR Gypsy 6404 6583 -429 8 652 3583 63 181 4 chrUextra 8830037 8830599 -20174057 - R1_DM LINE R1 -4672 684 23 8 652 1734 15 0 0 chrUextra 8830620 8830822 -20173834 - R1_DM LINE R1 0 5356 5155 8 652 262 106 0 21 chrUextra 8830926 8830974 -20173682 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 8 652 230 293 62 73 chrUextra 8831523 8831700 -20172956 - Invader1_LTR LTR Gypsy -55 368 194 8 652 291 28 0 0 chrUextra 8831807 8831843 -20172813 + BATUMI_I LTR Pao 6385 6420 -1543 8 652 4382 19 19 11 chrUextra 8831869 8832439 -20172217 - BATUMI_I LTR Pao -962 7001 6427 8 652 868 62 0 0 chrUextra 8832462 8832591 -20172065 + BATUMI_I LTR Pao 7303 7431 -532 8 652 6402 24 4 0 chrUextra 8832692 8833477 -20171179 + FW_DM LINE Jockey 2855 3642 -1050 8 652 437 126 103 62 chrUextra 8833603 8833761 -20170895 - Invader1_LTR LTR Gypsy -199 224 1 8 652 21 0 0 0 chrUextra 8833761 8833782 -20170874 + AT_rich Low_complexity Low_complexity 1 21 0 8 652 247 122 0 0 chrUextra 8833860 8833901 -20170755 - BARI1 DNA Tc1 -1707 43 3 8 652 3918 29 0 2 chrUextra 8833869 8834362 -20170294 + IDEFIX_LTR LTR Gypsy 1 492 -102 8 652 2663 180 8 5 chrUextra 8834466 8835057 -20169599 - SAR_DM Satellite Satellite -615 857 265 8 652 1606 5 0 0 chrUextra 8835048 8835247 -20169409 - FW_DM LINE Jockey 0 4692 4494 8 652 6239 31 1 0 chrUextra 8835347 8836132 -20168524 - MDG1_I LTR Gypsy -3622 2974 2189 8 652 2151 15 0 4 chrUextra 8836251 8836512 -20168144 + CIRCE LINE Composite 711 970 -5386 8 652 2265 54 0 77 chrUextra 8836654 8836994 -20167662 + CIRCE LINE Composite 973 1286 -5070 8 652 6864 1 1 0 chrUextra 8837117 8837902 -20166754 + R2_DM LINE R2 941 1726 -1881 8 652 6601 6 9 1 chrUextra 8838002 8838787 -20165869 + FW_DM LINE Jockey 2034 2824 -1868 8 652 2946 183 50 27 chrUextra 8838889 8839672 -20164984 - SAR_DM Satellite Satellite -549 800 1 8 652 6832 2 0 0 chrUextra 8839772 8840557 -20164099 - DM1731_I LTR Copia -764 3212 2428 8 652 2350 111 75 82 chrUextra 8840657 8841307 -20163349 + BATUMI_I LTR Pao 124 769 -7194 8 652 493 131 0 21 chrUextra 8841348 8841442 -20163214 + BATUMI_I LTR Pao 749 840 -7123 8 652 332 302 62 62 chrUextra 8841661 8842078 -20162578 - BLASTOPIA_I LTR Gypsy -1885 2596 2180 8 652 1199 14 0 0 chrUextra 8842427 8842573 -20162083 - FW_DM LINE Jockey -4366 326 181 8 652 350 111 32 0 chrUextra 8842579 8842642 -20162014 - DNAREP1_DM LINE Penelope -348 246 182 8 652 1911 5 0 0 chrUextra 8842994 8843212 -20161444 - PROTOP_A DNA P 0 1105 888 8 652 3851 30 0 0 chrUextra 8843312 8843782 -20160874 - R1_DM LINE R1 -861 4495 4026 8 652 2493 16 3 0 chrUextra 8843792 8844097 -20160559 - R1_DM LINE R1 -1690 3666 3361 8 652 6858 0 1 1 chrUextra 8844197 8844982 -20159674 + LSU-rRNA_Dme rRNA rRNA 3034 3818 -82 8 652 5195 16 0 118 chrUextra 8845082 8845867 -20158789 + CIRCE LINE Composite 1342 2033 -4323 8 652 1519 198 0 0 chrUextra 8845971 8846285 -20158371 - Gypsy5_I LTR Gypsy -1960 4549 4236 8 652 1368 170 208 58 chrUextra 8846267 8846752 -20157904 - Gypsy5_I LTR Gypsy -2624 3885 3328 8 652 3109 203 11 19 chrUextra 8846852 8847633 -20157023 - SAR_DM Satellite Satellite -556 774 1 8 652 491 16 0 16 chrUextra 8847737 8847799 -20156857 - NTS_DM Other Other -179 61 1 8 652 1734 21 17 17 chrUextra 8847799 8848039 -20156617 - NTS_DM Other Other 0 240 1 8 652 1408 20 20 20 chrUextra 8848039 8848242 -20156414 - NTS_DM Other Other 0 240 38 8 652 817 0 0 0 chrUextra 8848242 8848338 -20156318 - NTS_DM Other Other -107 133 38 8 652 832 9 9 27 chrUextra 8848338 8848449 -20156207 - NTS_DM Other Other -107 133 25 8 652 23 54 0 0 chrUextra 8848475 8848512 -20156144 + AT_rich Low_complexity Low_complexity 1 37 0 8 652 6434 1 0 0 chrUextra 8848622 8849407 -20155249 + TRANSPAC_I LTR Gypsy 3329 4113 -477 8 652 6023 45 5 3 chrUextra 8849509 8850292 -20154364 + R1_DM LINE R1 948 1732 -3624 8 652 641 92 20 10 chrUextra 8850412 8850511 -20154145 - STALKER4_LTR LTR Gypsy -23 379 280 8 652 3716 22 0 24 chrUextra 8850512 8850978 -20153678 + CIRCE LINE Composite 1428 1882 -4474 8 652 364 313 21 21 chrUextra 8850987 8851173 -20153483 + Gypsy12_I LTR Gypsy 3835 4020 -1526 8 652 906 26 0 49 chrUextra 8851054 8851176 -20153480 + CIRCE LINE Composite 1888 2003 -4353 8 652 4349 83 57 29 chrUextra 8851277 8852062 -20152594 - STALKER4_I LTR Gypsy -5054 1476 670 8 652 22 0 0 0 chrUextra 8853108 8853130 -20151526 + AT_rich Low_complexity Low_complexity 1 22 0 8 652 3689 2 0 0 chrUextra 8853934 8854360 -20150296 - LSU-rRNA_Dme rRNA rRNA -835 3065 2640 8 652 3083 6 0 0 chrUextra 8854358 8854717 -20149939 - R1_DM LINE R1 0 5356 4998 8 652 3044 68 5 0 chrUextra 8854817 8855227 -20149429 - BS3_DM LINE Jockey -853 937 526 8 652 2734 73 0 0 chrUextra 8855227 8855597 -20149059 - BS3_DM LINE Jockey -1369 421 52 8 652 1108 124 30 22 chrUextra 8855817 8856048 -20148608 + NTS_DM Other Other 8 240 0 8 652 827 108 0 0 chrUextra 8856194 8856324 -20148332 + NTS_DM Other Other 8 137 -103 8 652 433 127 53 38 chrUextra 8856332 8856463 -20148193 + NTS_DM Other Other 108 240 0 8 652 6281 1 1 32 chrUextra 8856587 8857372 -20147284 - LSU-rRNA_Dme rRNA rRNA -3123 777 17 8 652 2527 3 0 0 chrUextra 8857472 8857760 -20146896 - Gypsy4_I LTR Gypsy -3711 2577 2290 8 652 2870 3 63 0 chrUextra 8857760 8857908 -20146748 - Stalker3_LTR LTR Gypsy 0 372 225 8 652 207 0 0 0 chrUextra 8857908 8857931 -20146725 + (CTTAT)n Simple_repeat Simple_repeat 2 24 0 8 652 2870 3 63 0 chrUextra 8857931 8858132 -20146524 - Stalker3_LTR LTR Gypsy -148 224 2 8 652 1099 0 0 0 chrUextra 8858132 8858257 -20146399 - Gypsy4_I LTR Gypsy -3995 2293 2169 8 652 6500 22 1 0 chrUextra 8858357 8859142 -20145514 + R1_DM LINE R1 4440 5225 -131 8 652 2815 225 22 14 chrUextra 8859245 8860017 -20144639 + SAR_DM Satellite Satellite 1 778 -208 8 652 277 250 0 0 chrUextra 8860405 8860477 -20144179 + BS2 LINE Jockey 4148 4219 -502 8 652 3307 170 15 22 chrUextra 8861012 8861794 -20142862 + SAR_DM Satellite Satellite 335 1111 -361 8 652 3384 179 10 11 chrUextra 8861897 8862682 -20141974 - SAR_DM Satellite Satellite -439 1033 250 8 652 3186 173 18 22 chrUextra 8862782 8863567 -20141089 + SAR_DM Satellite Satellite 383 1164 -308 8 652 476 18 0 0 chrUextra 8863667 8863724 -20140932 + NINJA_I LTR Pao 5955 6011 0 8 652 2371 38 3 28 chrUextra 8863724 8864048 -20140608 + NINJA_LTR LTR Pao 1 316 -1 8 652 4682 4 0 0 chrUextra 8864552 8865097 -20139559 - FW_DM LINE Jockey -4147 545 1 8 652 944 26 0 0 chrUextra 8865437 8865551 -20139105 + ACCORD2_I LTR Gypsy 1254 1367 -5845 8 652 4103 24 19 12 chrUextra 8865636 8866222 -20138434 + ACCORD2_I LTR Gypsy 1508 2097 -5115 8 652 1807 51 88 0 chrUextra 8866809 8867107 -20137549 + PROTOP_B DNA P 451 754 -399 8 652 6649 6 0 0 chrUextra 8867207 8867992 -20136664 + Invader2_I LTR Gypsy 770 1554 -3038 8 652 2566 10 0 0 chrUextra 8868092 8868391 -20136265 + LSU-rRNA_Dme rRNA rRNA 2344 2642 -1258 8 652 4058 14 2 2 chrUextra 8868383 8868877 -20135779 + R1_DM LINE R1 3726 4219 -1137 8 652 6361 17 6 8 chrUextra 8868977 8869762 -20134894 + FW_DM LINE Jockey 3632 4415 -277 8 652 352 0 0 0 chrUextra 8869868 8869910 -20134746 + BATUMI_I LTR Pao 7922 7963 0 8 652 2242 21 0 27 chrUextra 8869910 8870203 -20134453 + BATUMI_I LTR Pao 7002 7286 -677 8 652 2265 22 0 214 chrUextra 8870193 8870647 -20134009 + G_DM LINE Jockey 638 994 -3352 8 652 3133 188 8 9 chrUextra 8870774 8871526 -20133130 - SAR_DM Satellite Satellite -396 1076 326 8 652 724 149 118 41 chrUextra 8871633 8871903 -20132753 - Invader1_LTR LTR Gypsy -72 351 1 8 652 21 0 0 0 chrUextra 8871903 8871924 -20132732 + AT_rich Low_complexity Low_complexity 1 21 0 8 652 269 98 0 0 chrUextra 8872002 8872043 -20132613 - BARI1 DNA Tc1 -1707 43 3 8 652 3149 22 62 0 chrUextra 8872011 8872417 -20132239 + IDEFIX_LTR LTR Gypsy 1 431 -163 8 652 2287 84 52 15 chrUextra 8872517 8873299 -20131357 - DMSAT6 Satellite Satellite -29 811 1 8 652 5683 42 52 3 chrUextra 8873402 8874186 -20130470 + DOC2_DM LINE Jockey 843 1665 -3128 8 652 6284 27 1 1 chrUextra 8874286 8875070 -20129586 - R1_DM LINE R1 -1402 3954 3171 8 652 231 36 0 0 chrUextra 8875597 8875625 -20129031 + (TTG)n Simple_repeat Simple_repeat 2 29 0 8 652 729 79 32 0 chrUextra 8875791 8875917 -20128739 + PROTOP DNA P 617 746 -3734 8 652 246 30 0 0 chrUextra 8875921 8875954 -20128702 + PROTOP_B DNA P 951 983 -170 8 652 317 281 104 86 chrUextra 8876550 8876830 -20127826 - Invader1_LTR LTR Gypsy -55 368 84 8 652 22 35 0 0 chrUextra 8877060 8877089 -20127567 + AT_rich Low_complexity Low_complexity 1 29 0 8 652 220 141 46 15 chrUextra 8877376 8877441 -20127215 + (TAA)n Simple_repeat Simple_repeat 2 68 0 8 652 5914 4 3 1 chrUextra 8877822 8878519 -20126137 + Invader1_I LTR Gypsy 2489 3186 0 8 652 702 12 0 11 chrUextra 8878519 8878606 -20126050 + Invader1_LTR LTR Gypsy 1 86 -337 8 652 6536 3 4 0 chrUextra 8878706 8879490 -20125166 + MDG1_I LTR Gypsy 1154 1940 -4656 8 652 284 122 24 24 chrUextra 8879840 8879924 -20124732 + A-rich Low_complexity Low_complexity 1 84 0 8 652 1103 48 7 0 chrUextra 8880227 8880374 -20124282 - DMRT1A LINE R1 -13 5170 5023 8 652 3402 176 12 9 chrUextra 8880488 8881258 -20123398 - SAR_DM Satellite Satellite -397 1075 304 8 652 4447 2 0 0 chrUextra 8881358 8881864 -20122792 - SSU-rRNA_Dme rRNA rRNA -1489 506 1 8 652 32 0 0 0 chrUextra 8881996 8882028 -20122628 + AT_rich Low_complexity Low_complexity 1 32 0 8 652 5000 26 2 0 chrUextra 8883126 8883734 -20120922 + R1_DM LINE R1 4458 5066 -290 8 652 887 44 0 9 chrUextra 8883731 8883846 -20120810 + R1_DM LINE R1 5243 5356 0 8 652 258 0 0 0 chrUextra 8883879 8883910 -20120746 + R1_DM LINE R1 1 31 -5325 8 652 277 106 21 0 chrUextra 8884040 8884087 -20120569 + NTS_DM Other Other 1 48 -192 8 652 981 108 0 6 chrUextra 8884185 8884352 -20120304 + NTS_DM Other Other 8 173 -67 8 652 306 83 21 0 chrUextra 8884382 8884430 -20120226 + NTS_DM Other Other 1 49 -191 8 652 1108 124 30 22 chrUextra 8884526 8884757 -20119899 + NTS_DM Other Other 8 240 0 8 652 6831 3 0 0 chrUextra 8884894 8885678 -20118978 - R2_DM LINE R2 -2115 1492 709 8 652 1150 70 6 0 chrUextra 8885782 8885954 -20118702 + ARS406_DM Unknown Unknown 1 173 -180 8 652 2705 175 8 8 chrUextra 8885974 8886561 -20118095 - SAR_DM Satellite Satellite -614 858 272 8 652 4010 190 1 0 chrUextra 8886662 8887446 -20117210 - ROVER-I_DM LTR Gypsy -3443 3141 2357 8 652 2967 176 9 16 chrUextra 8887546 8888330 -20116326 - SAR_DM Satellite Satellite -242 1230 192 8 652 774 243 162 0 chrUextra 8888439 8888674 -20115982 - Invader3_I LTR Gypsy -4253 635 363 8 652 269 178 0 0 chrUextra 8888683 8888728 -20115928 - BS2 LINE Jockey -439 4282 4238 8 652 695 0 0 40 chrUextra 8888822 8888921 -20115735 - DOC2_DM LINE Jockey -1 4792 4698 8 652 2627 20 0 0 chrUextra 8888921 8889214 -20115442 - DOC2_DM LINE Jockey -303 4490 4198 8 652 2521 121 20 54 chrUextra 8889314 8889812 -20114844 - BATUMI_I LTR Pao -6734 1229 749 8 652 633 142 147 49 chrUextra 8889853 8890098 -20114558 - BATUMI_I LTR Pao -7194 769 501 8 652 411 0 0 0 chrUextra 8890198 8890242 -20114414 - NTS_DM Other Other -159 81 38 8 652 898 9 9 27 chrUextra 8890242 8890353 -20114303 - NTS_DM Other Other -107 133 25 8 652 21 57 0 0 chrUextra 8890380 8890415 -20114241 + AT_rich Low_complexity Low_complexity 1 35 0 8 652 1350 18 0 6 chrUextra 8890415 8890580 -20114076 - NTS_DM Other Other -39 201 38 8 652 936 9 0 27 chrUextra 8890580 8890692 -20113964 - NTS_DM Other Other -107 133 25 8 652 1350 18 0 6 chrUextra 8890744 8890909 -20113747 - NTS_DM Other Other -39 201 38 8 652 549 14 27 0 chrUextra 8890909 8890982 -20113674 - NTS_DM Other Other -107 133 59 8 652 6679 24 5 3 chrUextra 8891082 8891866 -20112790 + DMRT1A LINE R1 2902 3687 -1496 8 652 4605 0 0 0 chrUextra 8891966 8892464 -20112192 + NOMAD_LTR LTR Gypsy 21 518 0 8 652 873 124 0 0 chrUextra 8892467 8892746 -20111910 + (TA)n Simple_repeat Simple_repeat 1 279 0 8 652 7147 1 1 0 chrUextra 8892850 8893632 -20111024 + FW_DM LINE Jockey 869 1651 -3041 8 652 2168 4 0 32 chrUextra 8893734 8894011 -20110645 + HMSBEAGLE_I LTR Gypsy 527 796 -5733 8 652 974 29 52 12 chrUextra 8894011 8894183 -20110473 + (TTA)n Simple_repeat Simple_repeat 1 179 0 8 652 2840 9 3 6 chrUextra 8894183 8894518 -20110138 + HMSBEAGLE_I LTR Gypsy 969 1302 -5227 8 652 2603 93 16 16 chrUextra 8894618 8894988 -20109668 + Gypsy12_I LTR Gypsy 1603 1972 -3574 8 652 3058 99 2 7 chrUextra 8894984 8895402 -20109254 + Gypsy12_I LTR Gypsy 2196 2611 -2935 8 652 560 144 192 0 chrUextra 8895531 8895635 -20109021 + HOBO DNA hAT 193 316 -2700 8 652 2259 90 184 23 chrUextra 8895636 8896033 -20108623 + PROTOP DNA P 17 477 -4003 8 652 1864 80 0 0 chrUextra 8896010 8896259 -20108397 + HOBO DNA hAT 330 578 -2438 8 652 237 67 0 0 chrUextra 8896256 8896286 -20108370 - Baggins1 LINE LOA -589 4864 4835 8 652 4140 29 25 0 chrUextra 8896386 8896869 -20107787 - MAX_I LTR Pao -4984 2930 2436 8 652 2651 13 0 3 chrUextra 8896869 8897170 -20107486 - MAX_I LTR Pao -5789 2125 1826 8 652 4716 38 2 0 chrUextra 8897270 8897818 -20106838 + Baggins1 LINE LOA 4808 5356 -97 8 652 2072 22 0 4 chrUextra 8897822 8898054 -20106602 + Baggins1 LINE LOA 5017 5247 -206 8 652 3222 187 13 20 chrUextra 8898154 8898936 -20105720 - SAR_DM Satellite Satellite -598 776 1 8 652 6491 1 3 59 chrUextra 8899922 8900706 -20103950 - LSU-rRNA_Dme rRNA rRNA -1738 2162 1423 8 652 7000 5 15 0 chrUextra 8900806 8901590 -20103066 + DMRT1B LINE R1 4248 5043 -140 8 652 1511 12 0 0 chrUextra 8901690 8901861 -20102795 + R1_DM LINE R1 4896 5066 -290 8 652 983 44 0 0 chrUextra 8901858 8901972 -20102684 + R1_DM LINE R1 5243 5356 0 8 652 3592 71 4 4 chrUextra 8902005 8902474 -20102182 + R1_DM LINE R1 1 469 -4887 8 652 7191 9 0 1 chrUextra 8903458 8904242 -20100414 + Copia2_I LTR Copia 1598 2380 -1782 8 652 2581 97 12 14 chrUextra 8904342 8905109 -20099547 + DMSAT6 Satellite Satellite 1 765 -74 8 652 6385 22 86 1 chrUextra 8905226 8906010 -20098646 + R1_DM LINE R1 3909 4758 -598 8 652 7192 0 3 3 chrUextra 8906111 8906894 -20097762 + SSU-rRNA_Dme rRNA rRNA 850 1632 -363 8 652 898 9 9 27 chrUextra 8907039 8907150 -20097506 + NTS_DM Other Other 25 133 -107 8 652 876 0 0 0 chrUextra 8907150 8907246 -20097410 + NTS_DM Other Other 38 133 -107 8 652 1516 25 20 20 chrUextra 8907246 8907449 -20097207 + NTS_DM Other Other 38 240 0 8 652 1878 21 17 17 chrUextra 8907449 8907689 -20096967 + NTS_DM Other Other 1 240 0 8 652 819 11 0 0 chrUextra 8907689 8907778 -20096878 + NTS_DM Other Other 1 89 -151 8 652 437 69 0 0 chrUextra 8908471 8908529 -20096127 - DNAREP1_DM LINE Penelope -9 585 528 8 652 545 122 16 73 chrUextra 8908533 8908657 -20095999 - DNAREP1_DM LINE Penelope -279 315 199 8 652 1884 25 4 59 chrUextra 8908940 8909194 -20095462 - ALUII_DM Unknown Unknown 0 240 1 8 652 21 57 0 0 chrUextra 8909194 8909229 -20095427 + AT_rich Low_complexity Low_complexity 1 35 0 8 652 22 35 0 0 chrUextra 8909426 8909455 -20095201 + AT_rich Low_complexity Low_complexity 1 29 0 8 652 3684 187 9 8 chrUextra 8909648 8910430 -20094226 + SAR_DM Satellite Satellite 224 1006 -466 8 652 2122 176 6 6 chrUextra 8910530 8911308 -20093348 + SAR_DM Satellite Satellite 1 778 -558 8 652 6346 32 82 0 chrUextra 8911414 8912198 -20092458 - R1_DM LINE R1 -3056 2300 1453 8 652 628 26 0 13 chrUextra 8912298 8912376 -20092280 + Invader2_I LTR Gypsy 4516 4592 0 8 652 2329 23 8 0 chrUextra 8912376 8912640 -20092016 + Invader2_LTR LTR Gypsy 1 266 0 8 81 1489 254 109 22 chrUextra 8912640 8913082 -20091574 + Gypsy2_I LTR Gypsy 2722 3202 -2933 8 653 6747 23 3 5 chrUextra 8913182 8913966 -20090690 + R1_DM LINE R1 4385 5166 -190 8 653 6857 6 3 1 chrUextra 8914066 8914850 -20089806 + DM297_I LTR Gypsy 8 792 -5375 8 653 3256 188 17 26 chrUextra 8914955 8915734 -20088922 - SAR_DM Satellite Satellite -255 1217 446 8 653 1034 83 0 0 chrUextra 8916718 8916862 -20087794 - ARS406_DM Unknown Unknown -209 144 1 8 653 3630 164 18 15 chrUextra 8916756 8917498 -20087158 + SAR_DM Satellite Satellite 180 923 -549 8 653 2450 0 0 0 chrUextra 8917602 8917872 -20086784 + MAX_I LTR Pao 7645 7914 0 8 653 2932 6 0 0 chrUextra 8917872 8918193 -20086463 + MAX_LTR LTR Pao 1 321 0 8 653 965 173 32 0 chrUextra 8918192 8918377 -20086279 + SAR_DM Satellite Satellite 533 723 -749 8 653 2315 16 0 0 chrUextra 8918486 8918742 -20085914 + R1_DM LINE R1 5101 5356 0 8 653 3864 65 4 4 chrUextra 8918775 8919270 -20085386 + R1_DM LINE R1 1 495 -4861 8 653 2656 7 7 10 chrUextra 8919370 8919675 -20084981 - LSU-rRNA_Dme rRNA rRNA -2531 1369 1066 8 653 4022 0 0 0 chrUextra 8919675 8920103 -20084553 - ROO_LTR LTR Pao 0 428 1 8 653 472 0 0 0 chrUextra 8920103 8920154 -20084502 - LSU-rRNA_Dme rRNA rRNA -2830 1070 1020 8 653 380 97 16 0 chrUextra 8920254 8920316 -20084340 + (TCTCC)n Simple_repeat Simple_repeat 2 64 0 8 653 881 19 9 0 chrUextra 8920321 8920428 -20084228 + (GAGAA)n Simple_repeat Simple_repeat 1 108 0 8 653 349 354 1 36 chrUextra 8921138 8921348 -20083308 - Gypsy3_I LTR Gypsy -4601 1534 1179 8 653 29 47 0 0 chrUextra 8922254 8922297 -20082359 + AT_rich Low_complexity Low_complexity 1 43 0 8 653 32 0 0 0 chrUextra 8922625 8922657 -20081999 + AT_rich Low_complexity Low_complexity 1 32 0 8 653 3162 80 70 14 chrUextra 8922906 8923389 -20081267 + PROTOP_B DNA P 644 1153 0 8 653 238 111 43 22 chrUextra 8923582 8923628 -20081028 + DNAREP1_DM LINE Penelope 250 296 -298 8 653 360 64 0 0 chrUextra 8923629 8923676 -20080980 + DNAREP1_DM LINE Penelope 185 231 -363 8 653 1413 259 163 0 chrUextra 8924082 8924572 -20080084 + Gypsy6_I LTR Gypsy 1940 2836 -4176 8 653 2223 4 0 0 chrUextra 8924672 8924910 -20079746 - LSU-rRNA_Dme rRNA rRNA -1023 2877 2640 8 653 4885 9 2 2 chrUextra 8924908 8925455 -20079201 - R1_DM LINE R1 0 5356 4810 8 653 961 82 0 0 chrUextra 8925557 8925692 -20078964 - ARS406_DM Unknown Unknown -218 135 1 8 653 3415 187 9 14 chrUextra 8925586 8926324 -20078332 + SAR_DM Satellite Satellite 180 914 -558 8 653 2202 28 3 101 chrUextra 8926438 8926754 -20077902 + Gypsy12_LTR LTR Gypsy 652 936 -1400 8 653 644 176 76 46 chrUextra 8926761 8926958 -20077698 - DMCR1A LINE CR1 -41 4429 4227 8 653 2916 34 90 16 chrUextra 8927321 8927709 -20076947 + IDEFIX_LTR LTR Gypsy 178 594 0 8 653 220 200 13 51 chrUextra 8927901 8927980 -20076676 + A-rich Low_complexity Low_complexity 1 76 0 8 653 1343 264 41 46 chrUextra 8928205 8928972 -20075684 - SAR_DM Satellite Satellite -723 763 1 8 653 3824 7 2 2 chrUextra 8929087 8929514 -20075142 - DOC LINE Jockey -1889 2836 2410 8 653 1903 157 8 6 chrUextra 8929501 8929853 -20074803 - SAR_DM Satellite Satellite -794 678 326 8 653 6739 24 1 1 chrUextra 8929970 8930753 -20073903 - R1_DM LINE R1 -1052 4304 3522 8 653 3811 123 121 6 chrUextra 8930853 8931521 -20073135 - TART LINE telomeric -6999 7478 6734 8 653 332 193 60 0 chrUextra 8931553 8931636 -20073020 - TART_B1 LINE telomeric -2339 8315 8228 8 653 1127 138 35 22 chrUextra 8931768 8931998 -20072658 - NTS_DM Other Other 0 240 8 8 653 296 125 21 0 chrUextra 8932096 8932144 -20072512 - NTS_DM Other Other -191 49 1 8 653 1115 139 20 5 chrUextra 8932175 8932377 -20072279 - NTS_DM Other Other -35 205 1 8 653 277 128 21 0 chrUextra 8932468 8932515 -20072141 - NTS_DM Other Other -192 48 1 8 653 5434 19 16 2 chrUextra 8932670 8933311 -20071345 + G_DM LINE Jockey 1 650 -3696 8 653 649 43 0 31 chrUextra 8933306 8933402 -20071254 + BATUMI_I LTR Pao 6997 7089 -874 8 653 6956 1 3 0 chrUextra 8933502 8934284 -20070372 + TABOR_I LTR Gypsy 1630 2413 -3923 8 653 6809 27 0 1 chrUextra 8934385 8935168 -20069488 + R1_DM LINE R1 1344 2125 -3231 8 653 412 255 119 94 chrUextra 8935467 8935753 -20068903 - Invader1_LTR LTR Gypsy -47 376 84 8 653 434 150 0 24 chrUextra 8935962 8936044 -20068612 + DMLTR5 LTR Gypsy 44 123 -143 8 653 2468 121 15 14 chrUextra 8936151 8936934 -20067722 + DMSAT6 Satellite Satellite 1 784 -85 8 653 7161 3 1 3 chrUextra 8937034 8937817 -20066839 - LSU-rRNA_Dme rRNA rRNA -2446 1454 673 8 653 6928 10 46 0 chrUextra 8937919 8938700 -20065956 - DM1731_I LTR Copia -1822 2154 1338 8 653 297 68 23 0 chrUextra 8938800 8938844 -20065812 - ARS406_DM Unknown Unknown -308 45 1 8 653 3633 187 9 10 chrUextra 8938805 8939583 -20065073 + SAR_DM Satellite Satellite 246 1022 -450 8 653 6618 18 0 24 chrUextra 8939683 8940464 -20064192 - QUASIMODO_I LTR Gypsy -5027 1033 272 8 653 2092 216 97 46 chrUextra 8940589 8941330 -20063326 + Gypsy12_LTR LTR Gypsy 831 1609 -727 8 653 237 65 0 0 chrUextra 8941495 8941526 -20063130 + (CA)n Simple_repeat Simple_repeat 2 32 0 8 653 3850 5 0 2 chrUextra 8943215 8943643 -20061013 - R1_DM LINE R1 -2594 2762 2336 8 653 3221 14 0 0 chrUextra 8943643 8943998 -20060658 + R1_DM LINE R1 4212 4566 -790 8 653 22 0 0 0 chrUextra 8944130 8944152 -20060504 + AT_rich Low_complexity Low_complexity 1 22 0 8 653 2405 180 47 34 chrUextra 8944179 8944737 -20059919 + Stalker2_I LTR Gypsy 291 855 -6547 8 653 1011 29 0 0 chrUextra 8944745 8944881 -20059775 - FW_DM LINE Jockey -4 4688 4553 8 653 7033 5 1 1 chrUextra 8944981 8945764 -20058892 - R1_DM LINE R1 -1436 3920 3138 8 653 6572 1 1 3 chrUextra 8945864 8946586 -20058070 - BLASTOPIA_I LTR Gypsy -3760 721 1 8 653 355 0 17 0 chrUextra 8946586 8946644 -20058012 - BLASTOPIA_LTR LTR Gypsy 0 275 217 8 653 1401 6 0 18 chrUextra 8946831 8946996 -20057660 - NTS_DM Other Other -78 162 1 8 653 1995 4 17 13 chrUextra 8946996 8947235 -20057421 - NTS_DM Other Other 0 240 1 8 653 1956 13 17 13 chrUextra 8947235 8947474 -20057182 - NTS_DM Other Other 0 240 1 8 653 350 0 71 54 chrUextra 8947474 8947530 -20057126 - NTS_DM Other Other 0 240 184 8 653 6725 24 17 1 chrUextra 8947630 8948411 -20056245 + R1_DM LINE R1 4184 4976 -380 8 653 3269 178 43 28 chrUextra 8948514 8949296 -20055360 + SAR_DM Satellite Satellite 415 1208 -264 8 653 366 23 0 0 chrUextra 8950126 8950169 -20054487 + (GAGAA)n Simple_repeat Simple_repeat 1 43 0 8 653 2050 156 76 16 chrUextra 8950279 8950702 -20053954 - TART LINE telomeric -5078 9399 8952 8 653 198 0 0 0 chrUextra 8951177 8951199 -20053457 + (ATAAG)n Simple_repeat Simple_repeat 3 24 0 8 653 1344 0 0 7 chrUextra 8951200 8951349 -20053307 + Stalker3_LTR LTR Gypsy 225 372 0 8 653 3605 12 8 0 chrUextra 8951349 8951746 -20052910 + Gypsy4_I LTR Gypsy 2290 2689 -3599 8 653 1882 19 0 5 chrUextra 8951731 8951945 -20052711 + Gypsy4_I LTR Gypsy 3200 3412 -2876 8 653 1567 101 1 10 chrUextra 8952052 8952316 -20052340 + BATUMI_I LTR Pao 4315 4736 -3178 8 653 4755 2 0 0 chrUextra 8952315 8952828 -20051828 + BATUMI_I LTR Pao 4900 5412 -2551 8 653 2877 193 11 13 chrUextra 8952928 8953638 -20051018 - Jockey2 LINE Jockey -1622 1806 1419 8 653 3373 188 20 20 chrUextra 8953811 8954593 -20050063 + SAR_DM Satellite Satellite 430 1211 -261 8 653 3799 220 9 2 chrUextra 8955586 8956359 -20048297 - Gypsy2_I LTR Gypsy -203 5974 5195 8 653 1188 288 29 38 chrUextra 8957343 8957820 -20046836 + Invader1_I LTR Gypsy 2092 2564 -622 8 653 1153 147 93 4 chrUextra 8958229 8958455 -20046201 + MAX_LTR LTR Pao 76 321 0 8 653 2836 176 7 5 chrUextra 8958454 8959009 -20045647 + SAR_DM Satellite Satellite 266 821 -651 8 653 501 87 12 12 chrUextra 8959109 8959191 -20045465 - Gypsy2_I LTR Gypsy -939 5196 5115 8 653 3634 109 181 70 chrUextra 8959180 8959892 -20044764 - Gypsy2_I LTR Gypsy -1390 4745 3955 8 653 3341 193 25 25 chrUextra 8959992 8960775 -20043881 - SAR_DM Satellite Satellite -539 783 1 8 653 5598 0 2 0 chrUextra 8960875 8961481 -20043175 - BLASTOPIA_I LTR Gypsy -3874 607 1 8 653 1378 17 40 11 chrUextra 8961481 8961658 -20042998 - BLASTOPIA_LTR LTR Gypsy 0 275 94 8 653 1568 0 0 0 chrUextra 8961758 8961925 -20042731 + LSU-rRNA_Dme rRNA rRNA 1838 2004 -1896 8 653 5665 2 0 0 chrUextra 8961926 8962541 -20042115 + R2_DM LINE R2 602 1216 -2391 8 653 4894 76 52 24 chrUextra 8962641 8963424 -20041232 + STALKER4_I LTR Gypsy 707 1511 -5019 8 653 438 168 429 41 chrUextra 8963526 8963747 -20040909 - DNAREP1_DM LINE Penelope -102 492 193 8 653 368 206 88 0 chrUextra 8963782 8963884 -20040772 - DNAREP1_DM LINE Penelope -483 111 1 8 653 2484 183 10 6 chrUextra 8964407 8965190 -20039466 + SAR_DM Satellite Satellite 1 785 -558 8 653 2589 53 6 3 chrUextra 8965290 8965612 -20039044 + G5_DM LINE Jockey 1548 1870 -2986 8 653 4260 17 2 0 chrUextra 8965591 8966073 -20038583 + G5_DM LINE Jockey 2604 3086 -1770 8 653 6761 11 42 0 chrUextra 8966173 8966956 -20037700 - Gypsy4_I LTR Gypsy -1035 5253 4438 8 653 3364 144 22 10 chrUextra 8967057 8967634 -20037022 + TAHRE LINE telomeric 9867 10450 -13 8 653 789 87 5 25 chrUextra 8967682 8967839 -20036817 + HETA LINE telomeric 1 157 -10306 8 653 3650 171 17 20 chrUextra 8967939 8968720 -20035936 + SAR_DM Satellite Satellite 377 1154 -318 8 653 6423 31 4 14 chrUextra 8969705 8970488 -20034168 - BATUMI_I LTR Pao -5792 2171 1397 8 653 2401 18 4 11 chrUextra 8970592 8970873 -20033783 + BATUMI_I LTR Pao 6723 7001 -962 8 653 4122 19 2 4 chrUextra 8970899 8971371 -20033285 - BATUMI_I LTR Pao -1543 6420 5950 8 653 1621 35 155 0 chrUextra 8971471 8971697 -20032959 - ROO_I LTR Pao -5170 3086 2826 8 653 4824 11 0 32 chrUextra 8971691 8972254 -20032402 + Gypsy12_LTR LTR Gypsy 255 799 -1537 8 653 2862 198 81 23 chrUextra 8972357 8973136 -20031520 - SAR_DM Satellite Satellite -224 1248 425 8 653 3664 174 9 11 chrUextra 8973243 8974008 -20030648 - SAR_DM Satellite Satellite -514 958 195 8 653 737 95 0 0 chrUextra 8973915 8974020 -20030636 + ARS406_DM Unknown Unknown 1 105 -248 8 653 1050 25 16 0 chrUextra 8974175 8974297 -20030359 - Baggins1 LINE LOA -15 5438 5315 8 653 1825 33 124 0 chrUextra 8974293 8974534 -20030122 - Baggins1 LINE LOA -456 4997 4727 8 653 27 29 0 0 chrUextra 8974773 8974807 -20029849 + AT_rich Low_complexity Low_complexity 1 34 0 8 653 21 89 0 0 chrUextra 8975380 8975436 -20029220 + AT_rich Low_complexity Low_complexity 1 56 0 8 653 26 30 0 0 chrUextra 8975564 8975597 -20029059 + AT_rich Low_complexity Low_complexity 1 33 0 8 653 4603 26 59 1 chrUextra 8975886 8976669 -20027987 - ACCORD2_I LTR Gypsy -4463 2749 1922 8 653 1625 145 0 8 chrUextra 8976769 8977026 -20027630 + FW_DM LINE Jockey 2871 3125 -1567 8 653 2228 88 4 49 chrUextra 8977062 8977551 -20027105 - DMSAT6 Satellite Satellite -3 467 1 8 653 7240 1 0 3 chrUextra 8977652 8978435 -20026221 + LSU-rRNA_Dme rRNA rRNA 2011 2791 -1109 8 653 5010 12 16 2 chrUextra 8978535 8979098 -20025558 + DMRT1B LINE R1 3241 3811 -1372 8 653 2034 0 0 0 chrUextra 8979096 8979317 -20025339 + DMRT1B LINE R1 3766 3986 -1197 8 653 2182 4 0 4 chrUextra 8979449 8979695 -20024961 + MICROPIA_LTR LTR Gypsy 232 476 0 8 653 4615 6 2 0 chrUextra 8979695 8980199 -20024457 + MICROPIA_I LTR Gypsy 1 505 -3971 8 653 3430 188 9 11 chrUextra 8980308 8981052 -20023604 - SAR_DM Satellite Satellite -535 937 195 8 653 757 98 16 8 chrUextra 8980958 8981081 -20023575 + ARS406_DM Unknown Unknown 1 124 -229 8 653 7101 15 0 0 chrUextra 8982063 8982845 -20021811 + R2_DM LINE R2 750 1531 -2076 8 653 3259 191 19 24 chrUextra 8982945 8983727 -20020929 - SAR_DM Satellite Satellite -261 1211 434 8 653 4467 0 0 2 chrUextra 8983827 8984339 -20020317 - DM176_I LTR Gypsy -423 5997 5487 8 653 2150 8 8 0 chrUextra 8984365 8984609 -20020047 - DM176_I LTR Gypsy -926 5494 5249 8 653 3281 197 14 22 chrUextra 8984709 8985491 -20019165 - SAR_DM Satellite Satellite -258 1214 439 8 653 3332 195 19 25 chrUextra 8985591 8986373 -20018283 + SAR_DM Satellite Satellite 1 777 -216 8 653 3506 191 13 10 chrUextra 8986473 8987255 -20017401 - SAR_DM Satellite Satellite -489 983 200 8 653 6696 22 31 1 chrUextra 8987355 8988137 -20016519 + R1_DM LINE R1 3792 4596 -760 8 653 6398 35 4 11 chrUextra 8988237 8989019 -20015637 + BATUMI_I LTR Pao 1451 2226 -5737 8 653 6670 26 0 1 chrUextra 8989119 8989901 -20014755 - NINJA_I LTR Pao -3709 2302 1522 8 653 4031 30 7 2 chrUextra 8990001 8990711 -20013945 - PROTOP_A DNA P -111 994 1 8 653 620 28 0 0 chrUextra 8990711 8990783 -20013873 + DOC5_DM LINE Jockey 4573 4644 -38 8 653 3155 25 0 0 chrUextra 8990883 8991240 -20013416 - R1_DM LINE R1 -1960 3396 3040 8 653 3579 30 16 0 chrUextra 8991238 8991665 -20012991 - R1_DM LINE R1 -2587 2769 2336 8 653 2539 176 13 6 chrUextra 8992647 8993427 -20011229 - SAR_DM Satellite Satellite -648 785 1 8 653 7268 0 0 0 chrUextra 8993531 8994309 -20010347 - BARI_DM DNA Tc1 -578 1150 373 8 653 2421 196 45 4 chrUextra 8994412 8995193 -20009463 - SAR_DM Satellite Satellite -533 813 1 8 653 2118 0 0 92 chrUextra 8995293 8995565 -20009091 - LSU-rRNA_Dme rRNA rRNA -3653 247 1 8 653 21 95 0 0 chrUextra 8995577 8995640 -20009016 + AT_rich Low_complexity Low_complexity 1 63 0 8 653 23 54 0 0 chrUextra 8995853 8995890 -20008766 + AT_rich Low_complexity Low_complexity 1 37 0 8 653 228 33 33 0 chrUextra 8996175 8996205 -20008451 + ARS406_DM Unknown Unknown 159 189 -164 8 653 3402 178 19 27 chrUextra 8996182 8996955 -20007701 - SAR_DM Satellite Satellite -281 1191 425 8 653 6750 3 40 1 chrUextra 8997057 8997839 -20006817 + R1_DM LINE R1 606 1417 -3939 8 653 2384 185 13 17 chrUextra 8998821 8999986 -20004670 + DMSAT6 Satellite Satellite 1 1159 -14 8 653 2339 103 26 15 chrUextra 9000013 9000478 -20004178 + DMSAT6 Satellite Satellite 1 470 0 8 653 948 296 27 26 chrUextra 9000587 9001359 -20003297 - SAR_DM Satellite Satellite -1082 772 1 8 653 2894 194 22 17 chrUextra 9001472 9002249 -20002407 - SAR_DM Satellite Satellite -255 1217 437 8 653 6570 8 37 0 chrUextra 9002349 9003131 -20001525 - DM1731_I LTR Copia -558 3418 2608 8 653 1627 10 0 5 chrUextra 9003812 9004013 -20000643 + Gypsy5_LTR LTR Gypsy 1 200 -230 8 653 3631 68 45 28 chrUextra 9004113 9004811 -19999845 + PROTOP_A DNA P 502 1153 0 8 653 6085 1 0 1 chrUextra 9004995 9005695 -19998961 - R2_DM LINE R2 -2906 701 3 8 653 738 0 0 0 chrUextra 9005693 9005777 -19998879 - LSU-rRNA_Dme rRNA rRNA -1319 2581 2498 8 653 6097 1 0 0 chrUextra 9005877 9006570 -19998086 - SSU-rRNA_Dme rRNA rRNA -1302 693 1 8 653 2611 203 66 14 chrUextra 9006763 9007523 -19997133 + SAR_DM Satellite Satellite 458 1256 -216 8 653 825 29 0 0 chrUextra 9007434 9007539 -19997117 - ARS406_DM Unknown Unknown -166 187 83 8 653 4670 16 0 2 chrUextra 9008523 9009080 -19995576 - LSU-rRNA_Dme rRNA rRNA -1554 2346 1791 8 653 1354 11 28 6 chrUextra 9009127 9009305 -19995351 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1607 8 653 1985 12 88 0 chrUextra 9009405 9009454 -19995202 - Stalker3_LTR LTR Gypsy -99 273 225 8 653 207 0 0 0 chrUextra 9009454 9009477 -19995179 + (CTTAT)n Simple_repeat Simple_repeat 2 24 0 8 653 1985 12 88 0 chrUextra 9009477 9009678 -19994978 - Stalker3_LTR LTR Gypsy -148 224 2 8 653 1957 17 4 0 chrUextra 9009678 9009914 -19994742 + R1_DM LINE R1 4830 5066 -290 8 653 943 35 0 0 chrUextra 9009911 9010025 -19994631 + R1_DM LINE R1 5243 5356 0 8 653 808 108 8 0 chrUextra 9010058 9010187 -19994469 + R1_DM LINE R1 1 130 -5226 8 653 2336 3 0 82 chrUextra 9010287 9010605 -19994051 - LSU-rRNA_Dme rRNA rRNA -3608 292 1 8 653 21 95 0 0 chrUextra 9010617 9010680 -19993976 + AT_rich Low_complexity Low_complexity 1 63 0 8 653 34 24 0 0 chrUextra 9010893 9010934 -19993722 + AT_rich Low_complexity Low_complexity 1 41 0 8 653 5921 9 124 1 chrUextra 9011169 9011951 -19992705 - Gypsy4_I LTR Gypsy -596 5692 4815 8 653 484 111 0 0 chrUextra 9012054 9012135 -19992521 + ARS406_DM Unknown Unknown 1 81 -272 8 653 1304 147 8 4 chrUextra 9012144 9012397 -19992259 - SAR_DM Satellite Satellite -847 625 372 8 653 1955 172 7 7 chrUextra 9012408 9012830 -19991826 - SAR_DM Satellite Satellite -447 1025 604 8 653 4388 91 133 1 chrUextra 9012961 9013677 -19990979 - R1_DM LINE R1 -9 5347 4538 8 653 1795 5 0 0 chrUextra 9013815 9014036 -19990620 + DOC LINE Jockey 4502 4722 -3 8 653 4152 52 42 8 chrUextra 9014002 9014597 -19990059 + TART LINE telomeric 9658 10272 -4205 8 653 2236 22 0 0 chrUextra 9014697 9014966 -19989690 - CIRCE LINE Composite -6087 269 1 8 653 4300 21 0 0 chrUextra 9014966 9015479 -19989177 - CIRCE LINE Composite 0 6356 5844 8 653 3310 185 6 10 chrUextra 9015579 9016359 -19988297 - SAR_DM Satellite Satellite -484 988 212 8 653 6615 11 0 0 chrUextra 9016461 9017243 -19987413 - G2_DM LINE Jockey -2098 1004 223 8 653 5097 2 2 0 chrUextra 9017343 9017931 -19986725 + LSU-rRNA_Dme rRNA rRNA 1967 2555 -1345 8 653 1496 0 0 0 chrUextra 9017954 9018125 -19986531 + R2_DM LINE R2 3427 3597 -10 8 653 21 57 0 0 chrUextra 9018423 9018458 -19986198 + AT_rich Low_complexity Low_complexity 1 35 0 8 653 2403 18 99 0 chrUextra 9018504 9019007 -19985649 - PROTOP_A DNA P -117 988 436 8 653 2299 121 14 12 chrUextra 9019119 9019889 -19984767 - DMSAT6 Satellite Satellite -3 772 1 8 653 728 317 18 18 chrUextra 9020039 9020597 -19984059 + Gypsy4_I LTR Gypsy 2431 3335 -4187 8 653 1510 23 19 0 chrUextra 9020431 9020645 -19984011 + TLD2 Unknown Unknown 1 218 0 8 653 323 265 4 12 chrUextra 9020655 9020770 -19983886 + GTWIN_I LTR Gypsy 3323 3424 -2997 8 653 3430 65 0 18 chrUextra 9020871 9021375 -19983281 + TART LINE telomeric 715 1209 -13268 8 653 490 33 0 0 chrUextra 9021375 9021436 -19983220 + PROTOP_B DNA P 1 61 -1092 8 653 882 17 8 55 chrUextra 9021430 9021557 -19983099 - NINJA_LTR LTR Pao -196 121 1 8 653 774 42 0 0 chrUextra 9021557 9021653 -19983003 - NINJA_I LTR Pao 0 6011 5916 8 653 6215 32 22 0 chrUextra 9022636 9023417 -19981239 + R1_DM LINE R1 2455 3252 -2104 8 653 3837 27 32 16 chrUextra 9023517 9024299 -19980357 + ROO_I LTR Pao 1686 2526 -5730 8 653 21 89 0 0 chrUextra 9024410 9024466 -19980190 + AT_rich Low_complexity Low_complexity 1 56 0 8 653 29 60 0 0 chrUextra 9024504 9024554 -19980102 + AT_rich Low_complexity Low_complexity 1 50 0 8 653 33 25 0 0 chrUextra 9024587 9024627 -19980029 + AT_rich Low_complexity Low_complexity 1 40 0 8 653 1504 41 0 10 chrUextra 9024986 9025181 -19979475 - PROTOP DNA P 0 4480 4288 8 653 6340 23 1 0 chrUextra 9025281 9026063 -19978593 - NINJA_I LTR Pao -1628 4383 3601 8 653 2343 86 8 35 chrUextra 9026163 9026945 -19977711 - DMSAT6 Satellite Satellite -67 760 1 8 653 5528 55 22 4 chrUextra 9027046 9027827 -19976829 - IDEFIX_I LTR Gypsy -1544 4084 3290 8 653 1500 141 15 11 chrUextra 9027927 9028199 -19976457 + Gypsy12_I LTR Gypsy 5274 5546 0 8 653 1359 131 5 0 chrUextra 9028199 9028421 -19976235 + Gypsy12A_LTR LTR Gypsy 1 223 -2057 8 653 22 80 0 0 chrUextra 9028486 9028536 -19976120 + AT_rich Low_complexity Low_complexity 1 50 0 8 653 24 53 0 0 chrUextra 9028591 9028629 -19976027 + AT_rich Low_complexity Low_complexity 1 38 0 8 653 416 104 15 0 chrUextra 9028642 9028709 -19975947 - DOC LINE Jockey -1130 3595 3528 8 653 1003 307 25 25 chrUextra 9028827 9029589 -19975067 + Gypsy_I LTR Gypsy 1801 2655 -3852 8 653 2987 180 19 28 chrUextra 9029691 9030473 -19974183 - SAR_DM Satellite Satellite -1023 774 1 8 653 1620 0 0 0 chrUextra 9030573 9030875 -19973781 + (GAGAA)n Simple_repeat Simple_repeat 1 302 0 8 653 192 40 0 0 chrUextra 9031551 9031576 -19973080 + (GA)n Simple_repeat Simple_repeat 2 26 0 8 653 511 193 16 16 chrUextra 9031576 9031697 -19972959 + HETRP_DM Satellite Satellite 1549 1669 -203 8 653 626 192 6 62 chrUextra 9031841 9032002 -19972654 + HETRP_DM Satellite Satellite 1518 1669 -203 8 653 422 184 20 10 chrUextra 9032138 9032237 -19972419 + HETRP_DM Satellite Satellite 1529 1628 -244 8 653 897 39 533 0 chrUextra 9032337 9032487 -19972169 - PROTOP_A DNA P -875 230 1 8 653 577 112 169 15 chrUextra 9033300 9033436 -19971220 + DNAREP1_DM LINE Penelope 226 382 -212 8 653 1698 76 104 11 chrUextra 9033443 9033722 -19970934 + DNAREP1_DM LINE Penelope 290 594 0 8 653 23 0 0 0 chrUextra 9033978 9034001 -19970655 + AT_rich Low_complexity Low_complexity 1 23 0 8 653 6012 1 1 62 chrUextra 9034101 9034882 -19969774 + LSU-rRNA_Dme rRNA rRNA 1723 2456 -1444 8 653 2870 28 0 0 chrUextra 9034982 9035338 -19969318 + STALKER4_I LTR Gypsy 2010 2365 -4165 8 653 2685 92 52 0 chrUextra 9035336 9035762 -19968894 - IDEFIX_I LTR Gypsy -874 4754 4307 8 653 1206 40 0 0 chrUextra 9035894 9036043 -19968613 + DMCR1A LINE CR1 1584 1732 -2738 8 653 4577 39 0 15 chrUextra 9036043 9036644 -19968012 + DMCR1A LINE CR1 1983 2574 -1896 8 653 207 0 0 0 chrUextra 9037387 9037410 -19967246 + (A)n Simple_repeat Simple_repeat 1 23 0 8 653 1609 20 120 0 chrUextra 9037625 9037875 -19966781 + STALKER4_I LTR Gypsy 6251 6530 0 8 653 3177 51 2 14 chrUextra 9037875 9038314 -19966342 + STALKER4_LTR LTR Gypsy 1 392 -10 8 653 519 12 0 46 chrUextra 9038318 9038405 -19966251 - DMSAT6 Satellite Satellite -66 404 322 8 653 3242 190 21 8 chrUextra 9038506 9039280 -19965376 - SAR_DM Satellite Satellite -443 1029 246 8 653 231 149 0 0 chrUextra 9039240 9039287 -19965369 + ARS406_DM Unknown Unknown 1 47 -306 8 653 1620 25 2 12 chrUextra 9039387 9039891 -19964765 + (TTATA)n Simple_repeat Simple_repeat 1 498 0 8 653 2153 40 4 0 chrUextra 9039891 9040168 -19964488 + DM1731_LTR LTR Copia 2 279 -57 8 653 4265 61 47 21 chrUextra 9040268 9040886 -19963770 - G5A_DM LINE Jockey -905 1936 1303 8 653 1157 43 142 0 chrUextra 9040887 9041049 -19963607 - G5A_DM LINE Jockey -1691 1150 966 8 653 524 283 25 21 chrUextra 9041151 9041386 -19963270 - MICROPIA_I LTR Gypsy -2881 1595 1360 8 653 333 315 36 36 chrUextra 9041534 9041811 -19962845 - Invader1_I LTR Gypsy -1960 1226 950 8 653 3554 104 122 21 chrUextra 9042107 9042811 -19961845 + TART LINE telomeric 6734 7508 -6969 8 653 27 29 0 0 chrUextra 9043269 9043303 -19961353 + AT_rich Low_complexity Low_complexity 1 34 0 8 653 1030 20 196 0 chrUextra 9043542 9043690 -19960966 + Baggins1 LINE LOA 4727 4903 -550 8 81 6522 20 0 0 chrUextra 9043792 9044573 -19960083 + FW_DM LINE Jockey 688 1468 -3224 8 654 2166 84 50 29 chrUextra 9045012 9045454 -19959202 + DMSAT6 Satellite Satellite 17 467 -3 8 654 2009 13 0 0 chrUextra 9045554 9045787 -19958869 + LSU-rRNA_Dme rRNA rRNA 2420 2652 -1248 8 654 4671 5 2 2 chrUextra 9045779 9046335 -19958321 + R1_DM LINE R1 3551 4106 -1250 8 654 1771 79 0 31 chrUextra 9046435 9046720 -19957936 + TART_B1 LINE telomeric 5412 5687 -4967 8 654 490 33 0 0 chrUextra 9046720 9046781 -19957875 + PROTOP_B DNA P 1 61 -1092 8 654 882 17 8 55 chrUextra 9046775 9046902 -19957754 - NINJA_LTR LTR Pao -196 121 1 8 654 2462 32 6 0 chrUextra 9046902 9047216 -19957440 - NINJA_I LTR Pao 0 6011 5696 8 654 318 202 0 21 chrUextra 9047319 9047415 -19957241 + XDMR_DM Unknown Unknown 267 360 0 8 654 2599 185 5 20 chrUextra 9047329 9047963 -19956693 - SAR_DM Satellite Satellite -353 1119 496 8 654 657 53 53 0 chrUextra 9047968 9048063 -19956593 + ARS406_DM Unknown Unknown 90 189 -164 8 654 537 154 42 17 chrUextra 9047978 9048097 -19956559 - SAR_DM Satellite Satellite -569 903 782 8 654 6699 6 1 0 chrUextra 9048197 9048978 -19955678 - G2_DM LINE Jockey -2098 1004 223 8 654 419 119 0 0 chrUextra 9049197 9049264 -19955392 - Gypsy8_LTR LTR Gypsy -237 67 1 8 654 1027 79 6 41 chrUextra 9049266 9049437 -19955219 - Invader2_I LTR Gypsy -567 4025 3861 8 654 1380 98 34 11 chrUextra 9049451 9049753 -19954903 - Invader2_I LTR Gypsy -799 3793 3419 8 654 701 66 28 0 chrUextra 9049753 9049859 -19954797 + IDEFIX_LTR LTR Gypsy 1 109 -485 8 654 623 27 0 0 chrUextra 9049959 9050034 -19954622 - R1_DM LINE R1 -39 5317 5243 8 654 5757 21 16 0 chrUextra 9050031 9050740 -19953916 - R1_DM LINE R1 -290 5066 4347 8 654 1620 5 0 0 chrUextra 9050840 9051062 -19953594 + (TATAA)n Simple_repeat Simple_repeat 1 222 0 8 654 2765 6 0 0 chrUextra 9051066 9051387 -19953269 + MAX_LTR LTR Pao 1 321 0 8 654 2017 8 0 0 chrUextra 9051387 9051621 -19953035 + MAX_I LTR Pao 1 234 -7680 8 654 1910 14 0 0 chrUextra 9051721 9051944 -19952712 + ROO_LTR LTR Pao 206 428 0 8 654 1477 22 0 0 chrUextra 9052602 9052783 -19951873 + G2_DM LINE Jockey 912 1092 -2010 8 654 2667 21 0 6 chrUextra 9052779 9053107 -19951549 - G_DM LINE Jockey -1368 2978 2653 8 654 246 150 0 0 chrUextra 9053157 9053197 -19951459 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 654 837 27 9 26 chrUextra 9053267 9053383 -19951273 + NTS_DM Other Other 25 138 -102 8 654 6010 31 5 11 chrUextra 9053483 9054264 -19950392 - BATUMI_I LTR Pao -5568 2395 1620 8 654 6815 3 0 0 chrUextra 9054366 9055145 -19949511 - R2_DM LINE R2 -910 2697 1919 8 654 6835 1 0 0 chrUextra 9055245 9056026 -19948630 + BURDOCK_I LTR Gypsy 3011 3791 -2069 8 654 1578 9 0 0 chrUextra 9057007 9057221 -19947435 + (GAGAA)n Simple_repeat Simple_repeat 1 214 0 8 654 430 286 19 19 chrUextra 9057223 9057380 -19947276 + BS2 LINE Jockey 1255 1411 -3310 8 654 1237 192 68 12 chrUextra 9057466 9057788 -19946868 + BS2 LINE Jockey 1536 1875 -2846 8 654 2238 7 0 84 chrUextra 9057888 9058199 -19946457 - LSU-rRNA_Dme rRNA rRNA -3615 285 1 8 654 34 24 0 0 chrUextra 9058487 9058528 -19946128 + AT_rich Low_complexity Low_complexity 1 41 0 8 654 5325 96 13 0 chrUextra 9058769 9059550 -19945106 + HETA LINE telomeric 2135 2925 -3156 8 654 3232 186 10 9 chrUextra 9059651 9060431 -19944225 + SAR_DM Satellite Satellite 237 1017 -455 8 654 2655 6 3 0 chrUextra 9060531 9060867 -19943789 - Invader2_I LTR Gypsy -4255 337 1 8 654 2260 15 0 0 chrUextra 9060867 9061133 -19943523 - Invader2_LTR LTR Gypsy 0 266 1 8 654 1304 6 0 34 chrUextra 9061133 9061312 -19943344 - Invader2_I LTR Gypsy 0 4592 4420 8 654 5825 23 1 27 chrUextra 9061441 9062185 -19942471 - Gypsy12_LTR LTR Gypsy -1611 725 1 8 654 2282 4 0 4 chrUextra 9062293 9062568 -19942088 + Copia_I LTR Copia 24 297 -4296 8 654 3533 52 0 0 chrUextra 9063174 9063635 -19941021 - BS2 LINE Jockey -129 4592 4132 8 654 835 280 64 0 chrUextra 9063691 9063955 -19940701 + BS2 LINE Jockey 788 1068 -3653 8 654 2386 98 40 16 chrUextra 9064055 9064836 -19939820 + DMSAT6 Satellite Satellite 1 800 -97 8 654 383 323 48 38 chrUextra 9065274 9065567 -19939089 + MICROPIA_I LTR Gypsy 1 296 -4180 8 654 707 118 4 45 chrUextra 9065568 9065717 -19938939 - STALKER4_LTR LTR Gypsy -3 399 249 8 654 1554 17 0 0 chrUextra 9065817 9066115 -19938541 + (TTATA)n Simple_repeat Simple_repeat 1 298 0 8 654 744 47 0 0 chrUextra 9066115 9066222 -19938434 + G2_DM LINE Jockey 2989 3095 -7 8 654 3079 32 3 0 chrUextra 9066221 9066598 -19938058 - LSU-rRNA_Dme rRNA rRNA -474 3426 3049 8 654 3141 182 43 10 chrUextra 9066703 9067478 -19937178 + SAR_DM Satellite Satellite 195 994 -478 8 654 840 20 0 10 chrUextra 9067579 9067682 -19936974 + PROTOP_B DNA P 1054 1153 0 8 654 2920 89 72 105 chrUextra 9067682 9068360 -19936296 + PROTOP_B DNA P 420 1075 -78 8 654 6309 28 3 0 chrUextra 9068460 9069241 -19935415 + R1_DM LINE R1 2471 3253 -2103 8 654 983 332 9 17 chrUextra 9069352 9069877 -19934779 + MICROPIA_I LTR Gypsy 3354 3850 -626 8 654 2856 189 22 33 chrUextra 9070232 9071002 -19933654 - SAR_DM Satellite Satellite -577 761 1 8 654 40 21 0 0 chrUextra 9071820 9071867 -19932789 + AT_rich Low_complexity Low_complexity 1 47 0 8 654 763 59 17 0 chrUextra 9072217 9072335 -19932321 + (CAATA)n Simple_repeat Simple_repeat 5 124 0 8 654 2470 0 0 3 chrUextra 9072335 9072632 -19932024 - FW_DM LINE Jockey -1 4691 4396 8 654 2216 107 9 55 chrUextra 9072891 9073641 -19931015 - DMSAT6 Satellite Satellite 0 716 1 8 654 1915 174 21 5 chrUextra 9073746 9074168 -19930488 - SAR_DM Satellite Satellite -588 884 456 8 654 1417 186 24 3 chrUextra 9074188 9074527 -19930129 - SAR_DM Satellite Satellite -566 906 561 8 654 530 37 0 123 chrUextra 9074627 9074814 -19929842 + T-rich Low_complexity Low_complexity 3 166 0 8 654 1243 75 0 5 chrUextra 9075508 9075696 -19928960 + ARS406_DM Unknown Unknown 3 189 -164 8 654 1038 178 12 12 chrUextra 9075696 9075752 -19928904 - SAR_DM Satellite Satellite -830 642 399 8 654 370 57 19 0 chrUextra 9075768 9075821 -19928835 + ARS406_DM Unknown Unknown 136 189 -164 8 654 2339 164 16 8 chrUextra 9075777 9076286 -19928370 - SAR_DM Satellite Satellite -614 858 346 8 654 5425 85 3 4 chrUextra 9076393 9077169 -19927487 + HETA LINE telomeric 1916 2690 -3391 8 654 256 128 0 0 chrUextra 9077270 9077317 -19927339 - ARS406_DM Unknown Unknown -306 47 1 8 654 2660 173 56 11 chrUextra 9077277 9077907 -19926749 + SAR_DM Satellite Satellite 246 903 -569 8 654 846 81 7 0 chrUextra 9077914 9078050 -19926606 - ARS406_DM Unknown Unknown -195 158 22 8 654 3360 179 7 8 chrUextra 9078151 9078921 -19925735 - SAR_DM Satellite Satellite -480 992 224 8 654 442 99 0 0 chrUextra 9078859 9078930 -19925726 + ARS406_DM Unknown Unknown 1 71 -282 8 654 309 51 0 0 chrUextra 9079469 9079508 -19925148 + (TA)n Simple_repeat Simple_repeat 1 39 0 8 654 3256 119 42 87 chrUextra 9082556 9083337 -19921319 - PROTOP_B DNA P -92 1061 316 8 654 2025 0 0 0 chrUextra 9083901 9084141 -19920515 - ALUII_DM Unknown Unknown 0 240 1 8 654 21 57 0 0 chrUextra 9084141 9084176 -19920480 + AT_rich Low_complexity Low_complexity 1 35 0 8 654 2889 28 3 0 chrUextra 9084319 9084683 -19919973 - NINJA_I LTR Pao -1648 4363 3999 8 654 3428 28 0 9 chrUextra 9084660 9085099 -19919557 - NINJA_I LTR Pao -3164 2847 2413 8 654 3407 179 14 7 chrUextra 9085202 9085973 -19918683 + SAR_DM Satellite Satellite 282 1058 -414 8 654 2898 63 5 17 chrUextra 9086296 9086702 -19917954 + Baggins1 LINE LOA 4791 5191 -262 8 654 3952 2 0 0 chrUextra 9086961 9087419 -19917237 - QUASIMODO_LTR LTR Gypsy -96 562 105 8 654 586 6 125 3 chrUextra 9087420 9087741 -19916915 + (TA)n Simple_repeat Simple_repeat 1 360 0 8 654 5286 16 0 0 chrUextra 9087842 9088467 -19916189 - BS2 LINE Jockey -4016 705 81 8 654 479 0 146 0 chrUextra 9088472 9088623 -19916033 + (TA)n Simple_repeat Simple_repeat 1 173 0 8 654 5057 92 1 1 chrUextra 9088723 9089504 -19915152 - BATUMI_I LTR Pao -3366 4548 3692 8 654 2396 214 61 18 chrUextra 9089607 9090383 -19914273 + SAR_DM Satellite Satellite 1 809 -208 8 654 6316 18 1 3 chrUextra 9090485 9091266 -19913390 - G_DM LINE Jockey -1563 2783 2004 8 654 6592 1 35 0 chrUextra 9091366 9092147 -19912509 - Invader4_I LTR Gypsy -426 1987 1180 8 654 2926 180 9 11 chrUextra 9092255 9093028 -19911628 - SAR_DM Satellite Satellite -396 771 1 8 654 6587 15 0 0 chrUextra 9093128 9093909 -19910747 + DOC2_DM LINE Jockey 3828 4608 -185 8 654 2206 29 0 0 chrUextra 9094009 9094281 -19910375 - DM1731_LTR LTR Copia -64 272 1 8 654 2205 191 6 6 chrUextra 9094280 9094790 -19909866 - SAR_DM Satellite Satellite -707 765 256 8 654 719 325 22 23 chrUextra 9095185 9095670 -19908986 - MICROPIA_I LTR Gypsy -3389 710 229 8 654 458 233 81 0 chrUextra 9095772 9095944 -19908712 - DNAREP1_DM LINE Penelope -407 187 2 8 654 292 120 100 0 chrUextra 9096222 9096272 -19908384 + DNAREP1_DM LINE Penelope 408 462 -132 8 654 1182 55 0 0 chrUextra 9096389 9096552 -19908104 + (GAGAA)n Simple_repeat Simple_repeat 2 164 0 8 654 4128 119 154 8 chrUextra 9096652 9097433 -19907223 + TAHRE LINE telomeric 716 1610 -8853 8 654 3622 52 42 0 chrUextra 9097702 9098310 -19906346 - PROTOP_A DNA P 0 1105 570 8 654 6671 10 0 0 chrUextra 9098414 9099195 -19905461 - Gypsy4_I LTR Gypsy -3638 2650 1870 8 654 575 125 0 0 chrUextra 9099295 9099383 -19905273 - Baggins1 LINE LOA -604 4849 4762 8 654 893 180 80 90 chrUextra 9099704 9100016 -19904640 - TIRANT_LTR LTR Gypsy -108 309 1 8 654 2628 82 181 3 chrUextra 9100175 9100743 -19903913 - TART_B1 LINE telomeric -7587 3067 2399 8 654 1707 33 0 5 chrUextra 9100743 9100955 -19903701 - PROTOP_A DNA P 0 1105 895 8 654 5567 43 60 24 chrUextra 9101055 9101835 -19902821 - DMCR1A LINE CR1 -1464 3006 2199 8 654 4958 0 0 0 chrUextra 9101935 9102517 -19902139 - STALKER4_I LTR Gypsy -782 5748 5167 8 654 268 55 309 0 chrUextra 9102518 9102573 -19902083 - Stalker2_I LTR Gypsy -7089 313 242 8 654 6006 36 6 4 chrUextra 9102815 9103595 -19901061 - DMRT1B LINE R1 -167 5016 4235 8 654 3320 20 12 0 chrUextra 9103697 9104105 -19900551 + FW_DM LINE Jockey 4018 4430 -262 8 654 1411 25 56 0 chrUextra 9104121 9104317 -19900339 + FW_DM LINE Jockey 4486 4692 0 8 654 254 29 0 0 chrUextra 9104323 9104357 -19900299 - R1_DM LINE R1 -3966 1390 1357 8 654 904 26 8 8 chrUextra 9104357 9104475 -19900181 - R1_DM LINE R1 -4150 1206 1089 8 654 888 97 8 16 chrUextra 9104575 9105355 -19899301 + RSP Satellite Satellite 1 773 0 8 654 4987 109 5 1 chrUextra 9105455 9106235 -19898421 - S_DM DNA Tc1 -185 1551 769 8 654 6661 0 1 0 chrUextra 9106335 9107115 -19897541 + DOC LINE Jockey 1454 2234 -2491 8 654 3341 182 9 10 chrUextra 9107216 9107995 -19896661 - SAR_DM Satellite Satellite -439 1033 256 8 654 464 146 73 0 chrUextra 9108985 9109081 -19895575 + DMCR1A LINE CR1 2303 2405 -2065 8 654 684 250 107 11 chrUextra 9109140 9109411 -19895245 - BS LINE Jockey -1688 3438 3142 8 654 261 301 0 0 chrUextra 9109661 9109754 -19894902 - BS LINE Jockey -2328 2798 2706 8 654 1523 6 0 0 chrUextra 9109855 9110032 -19894624 - Copia2_I LTR Copia -869 3293 3117 8 654 22 35 0 0 chrUextra 9110066 9110095 -19894561 + AT_rich Low_complexity Low_complexity 1 29 0 8 654 58 15 0 0 chrUextra 9110270 9110335 -19894321 + AT_rich Low_complexity Low_complexity 1 65 0 8 654 426 176 32 48 chrUextra 9111383 9111508 -19893148 - Stalker2_I LTR Gypsy -6520 882 760 8 654 46 0 0 0 chrUextra 9112247 9112293 -19892363 + AT_rich Low_complexity Low_complexity 1 46 0 8 654 6972 5 8 0 chrUextra 9112495 9113275 -19891381 + Copia2_I LTR Copia 403 1188 -2974 8 654 3238 180 16 19 chrUextra 9113375 9114155 -19890501 + SAR_DM Satellite Satellite 1 777 -242 8 654 22 0 0 0 chrUextra 9115013 9115035 -19889621 + AT_rich Low_complexity Low_complexity 1 22 0 8 654 2540 177 9 9 chrUextra 9115135 9115915 -19888741 + SAR_DM Satellite Satellite 1 780 -558 8 654 3327 172 21 29 chrUextra 9116016 9116789 -19887867 + SAR_DM Satellite Satellite 425 1191 -281 8 654 250 33 0 0 chrUextra 9116765 9116795 -19887861 - ARS406_DM Unknown Unknown -164 189 160 8 654 3079 184 57 26 chrUextra 9116895 9117663 -19886993 + SAR_DM Satellite Satellite 1 791 -203 8 654 726 78 0 0 chrUextra 9117573 9117675 -19886981 - ARS406_DM Unknown Unknown -164 189 88 8 654 368 303 14 43 chrUextra 9118188 9118395 -19886261 - BLASTOPIA_I LTR Gypsy -740 3741 3541 8 654 1332 25 0 0 chrUextra 9118655 9118814 -19885842 - DM297_I LTR Gypsy -6008 159 1 8 654 3523 5 7 7 chrUextra 9118814 9119228 -19885428 - DM297_LTR LTR Gypsy 0 414 1 8 654 1143 175 30 12 chrUextra 9119557 9120060 -19884596 + SAR_DM Satellite Satellite 1 511 -680 8 654 1097 161 37 8 chrUextra 9120071 9120315 -19884341 + SAR_DM Satellite Satellite 539 789 -683 8 654 2283 204 45 9 chrUextra 9120416 9121195 -19883461 + SAR_DM Satellite Satellite 1 806 -666 8 654 3269 45 0 2 chrUextra 9121324 9121724 -19882932 - STALKER4_LTR LTR Gypsy -3 399 1 8 654 3037 23 0 0 chrUextra 9121724 9122075 -19882581 + FW_DM LINE Jockey 3240 3590 -1102 8 654 4276 38 0 0 chrUextra 9122175 9122701 -19881955 + PROTOP_A DNA P 580 1105 0 8 654 657 298 4 0 chrUextra 9122713 9122955 -19881701 - ROVER-I_DM LTR Gypsy -5050 1534 1292 8 654 3891 174 5 6 chrUextra 9123058 9123835 -19880821 - SAR_DM Satellite Satellite -435 1037 262 8 654 1209 0 0 0 chrUextra 9123935 9124073 -19880583 + QUASIMODO_LTR LTR Gypsy 521 658 0 8 654 5488 3 5 22 chrUextra 9124073 9124715 -19879941 + QUASIMODO_I LTR Gypsy 1 631 -5429 8 654 3570 175 12 12 chrUextra 9124815 9125585 -19879071 - SAR_DM Satellite Satellite -455 1017 248 8 654 281 243 0 0 chrUextra 9125524 9125594 -19879062 + XDMR_DM Unknown Unknown 18 87 -273 8 654 2296 255 2 2 chrUextra 9125914 9126475 -19878181 + HMSBEAGLE_I LTR Gypsy 3100 3660 -2869 8 654 993 0 0 78 chrUextra 9126578 9126770 -19877886 + (CACAA)n Simple_repeat Simple_repeat 4 180 0 8 654 5074 7 2 0 chrUextra 9126783 9127355 -19877301 + DMRT1B LINE R1 1328 1900 -3283 8 654 604 318 27 36 chrUextra 9127455 9127820 -19876836 - MICROPIA_I LTR Gypsy -2143 2333 1972 8 654 3084 6 0 0 chrUextra 9127883 9128232 -19876424 + QUASIMODO_LTR LTR Gypsy 124 472 -186 8 654 6493 10 58 3 chrUextra 9128335 9129115 -19875541 - DM176_I LTR Gypsy -2054 4366 3544 8 654 6784 16 0 5 chrUextra 9129215 9129995 -19874661 + FW_DM LINE Jockey 3541 4316 -376 8 654 6881 9 9 1 chrUextra 9130095 9130875 -19873781 + Gypsy4_I LTR Gypsy 1478 2263 -4025 8 654 6918 1 0 1 chrUextra 9131855 9132635 -19872021 - ROO_I LTR Pao -5870 2386 1608 8 654 372 280 111 93 chrUextra 9132746 9133026 -19871630 + Invader1_LTR LTR Gypsy 84 368 -55 8 654 325 246 43 17 chrUextra 9134258 9134374 -19870282 + STALKER4_I LTR Gypsy 2111 2229 -4301 8 654 3461 172 19 26 chrUextra 9134495 9135275 -19869381 - SAR_DM Satellite Satellite -308 1164 390 8 654 1587 5 0 0 chrUextra 9135379 9135602 -19869054 + (TTATA)n Simple_repeat Simple_repeat 1 223 0 8 654 2788 39 0 0 chrUextra 9135602 9135938 -19868718 - DM1731_LTR LTR Copia 0 336 1 8 654 1839 5 0 23 chrUextra 9135938 9136155 -19868501 - DM1731_I LTR Copia 0 3976 3765 8 654 1760 34 0 0 chrUextra 9136457 9136694 -19867962 - QUASIMODO_I LTR Gypsy -333 5727 5491 8 654 1027 68 34 0 chrUextra 9136703 9136850 -19867806 - QUASIMODO_I LTR Gypsy -885 5175 5024 8 654 1658 0 0 0 chrUextra 9136850 9137035 -19867621 - Copia2_LTR_DM LTR Copia 0 198 14 8 654 3918 9 47 0 chrUextra 9137135 9137811 -19866845 + PROTOP_A DNA P 398 1105 0 8 654 684 48 0 9 chrUextra 9137811 9137915 -19866741 - ZAM_I LTR Gypsy -1762 5728 5626 8 654 2523 7 7 0 chrUextra 9138015 9138323 -19866333 + DOC LINE Jockey 4414 4723 -2 8 654 3179 196 26 27 chrUextra 9138895 9139671 -19864985 - HETA LINE telomeric -1643 4438 3664 8 654 6316 28 5 3 chrUextra 9139775 9140555 -19864101 - PROTOP_A DNA P -5 1100 319 8 654 376 138 0 0 chrUextra 9140655 9140713 -19863943 + ARS406_DM Unknown Unknown 130 187 -166 8 654 3099 194 30 27 chrUextra 9140665 9141435 -19863221 - SAR_DM Satellite Satellite -255 1217 446 8 654 34 24 0 0 chrUextra 9141891 9141932 -19862724 + AT_rich Low_complexity Low_complexity 1 41 0 8 654 696 122 0 65 chrUextra 9142159 9142282 -19862374 - Gypsy6A_LTR LTR Gypsy -118 302 188 8 654 3670 163 10 19 chrUextra 9142415 9143195 -19861461 + SAR_DM Satellite Satellite 253 1025 -447 8 654 271 56 0 0 chrUextra 9143295 9143331 -19861325 - ARS406_DM Unknown Unknown -227 126 91 8 654 3507 173 10 7 chrUextra 9143344 9144073 -19860583 + SAR_DM Satellite Satellite 326 1056 -416 8 654 6949 9 1 1 chrUextra 9144175 9144955 -19859701 - R2_DM LINE R2 -473 3134 2355 8 654 3698 38 0 0 chrUextra 9145055 9145507 -19859149 - IDEFIX_I LTR Gypsy -5176 452 1 8 654 25 0 0 0 chrUextra 9145799 9145824 -19858832 + AT_rich Low_complexity Low_complexity 1 25 0 8 654 6714 19 0 0 chrUextra 9145935 9146715 -19857941 + ROO_I LTR Pao 5559 6338 -1918 8 654 1289 0 23 17 chrUextra 9146815 9146988 -19857668 + NTS_DM Other Other 67 240 0 8 654 1940 0 17 13 chrUextra 9146988 9147227 -19857429 + NTS_DM Other Other 1 240 0 8 654 1915 8 17 13 chrUextra 9147227 9147466 -19857190 + NTS_DM Other Other 1 240 0 8 654 1159 0 0 0 chrUextra 9147466 9147595 -19857061 + NTS_DM Other Other 1 129 -111 8 654 356 265 114 96 chrUextra 9147711 9147991 -19856665 - Invader1_LTR LTR Gypsy -55 368 84 8 654 982 168 102 15 chrUextra 9148200 9148405 -19856251 + DMLTR5 LTR Gypsy 44 266 0 8 654 369 111 32 0 chrUextra 9148404 9148467 -19856189 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 8 654 6527 26 37 1 chrUextra 9148575 9149355 -19855301 + R1_DM LINE R1 4072 4879 -477 8 654 3030 3 3 0 chrUextra 9149455 9149814 -19854842 - ROO_I LTR Pao -3301 4955 4596 8 654 522 119 0 0 chrUextra 9149814 9149898 -19854758 + (CTG)n Simple_repeat Simple_repeat 1 84 0 8 654 2803 9 23 6 chrUextra 9149898 9150235 -19854421 - ROO_I LTR Pao -7616 640 296 8 654 5543 62 35 1 chrUextra 9150335 9151114 -19853542 + STALKER4_I LTR Gypsy 2551 3355 -3175 8 654 2016 238 46 9 chrUextra 9151281 9151829 -19852827 + BS LINE Jockey 2231 2798 -2328 8 654 5608 2 2 0 chrUextra 9152095 9152712 -19851944 - LSU-rRNA_Dme rRNA rRNA -643 3257 2640 8 654 1398 7 0 0 chrUextra 9152710 9152864 -19851792 - R1_DM LINE R1 0 5356 5203 8 654 5961 25 116 0 chrUextra 9152976 9153755 -19850901 + Copia2_I LTR Copia 1118 1986 -2176 8 654 1148 144 64 5 chrUextra 9154094 9154297 -19850359 + DNAREP1_DM LINE Penelope 22 236 -358 8 654 212 0 0 35 chrUextra 9154348 9154377 -19850279 + (TAA)n Simple_repeat Simple_repeat 2 29 0 8 654 1167 64 13 6 chrUextra 9154735 9154893 -19849763 + G5_DM LINE Jockey 1712 1870 -2986 8 654 5544 25 0 2 chrUextra 9154872 9155515 -19849141 + G5_DM LINE Jockey 2604 3245 -1611 8 654 23 33 0 0 chrUextra 9156027 9156057 -19848599 + AT_rich Low_complexity Low_complexity 1 30 0 8 654 1658 19 29 0 chrUextra 9156495 9156700 -19847956 + IDEFIX_LTR LTR Gypsy 106 316 -278 8 654 21 0 0 0 chrUextra 9156700 9156721 -19847935 + AT_rich Low_complexity Low_complexity 1 21 0 8 654 2837 32 3 6 chrUextra 9156723 9157073 -19847583 - CIRCE LINE Composite -1027 5329 4981 8 654 3417 0 0 0 chrUextra 9157375 9157748 -19846908 + LSU-rRNA_Dme rRNA rRNA 3528 3900 0 8 654 22 56 0 0 chrUextra 9157820 9157856 -19846800 + AT_rich Low_complexity Low_complexity 1 36 0 8 654 262 150 0 0 chrUextra 9157861 9157901 -19846755 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 654 262 150 0 0 chrUextra 9157953 9157993 -19846663 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 654 262 150 0 0 chrUextra 9158045 9158085 -19846571 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 654 636 20 39 39 chrUextra 9158255 9158357 -19846299 + NTS_DM Other Other 139 240 0 8 654 1813 21 17 17 chrUextra 9158357 9158597 -19846059 + NTS_DM Other Other 1 240 0 8 654 1177 8 0 0 chrUextra 9158597 9158730 -19845926 + NTS_DM Other Other 1 133 -107 8 654 1304 18 0 6 chrUextra 9158730 9158895 -19845761 + NTS_DM Other Other 38 201 -39 8 654 21 57 0 0 chrUextra 9158895 9158930 -19845726 + AT_rich Low_complexity Low_complexity 1 35 0 8 654 569 13 26 39 chrUextra 9158957 9159035 -19845621 + NTS_DM Other Other 25 101 -139 8 654 3891 107 70 4 chrUextra 9159140 9159915 -19844741 - Gypsy12_I LTR Gypsy -1345 4201 3376 8 654 6826 18 0 0 chrUextra 9160895 9161674 -19842982 + R1_DM LINE R1 3987 4765 -591 8 654 3320 189 14 21 chrUextra 9161774 9162552 -19842104 + SAR_DM Satellite Satellite 419 1191 -281 8 654 868 0 0 19 chrUextra 9162653 9162760 -19841896 - QUASIMODO_LTR LTR Gypsy -553 105 1 8 654 4017 124 23 0 chrUextra 9162768 9163380 -19841276 + HMSBEAGLE_I LTR Gypsy 5063 5688 -841 8 654 3477 25 5 0 chrUextra 9163532 9163936 -19840720 - R1_DM LINE R1 -86 5270 4865 8 654 21 0 0 0 chrUextra 9164282 9164303 -19840353 + AT_rich Low_complexity Low_complexity 1 21 0 8 654 1716 0 0 5 chrUextra 9164411 9164605 -19840051 - ROO_I LTR Pao -8063 193 1 8 654 3917 2 0 0 chrUextra 9164605 9165033 -19839623 - ROO_LTR LTR Pao 0 428 1 8 654 1798 19 14 0 chrUextra 9165290 9165500 -19839156 + R1_DM LINE R1 5144 5356 0 8 654 4035 65 47 0 chrUextra 9165533 9166069 -19838587 + R1_DM LINE R1 1 561 -4795 8 654 7002 0 1 4 chrUextra 9166169 9166948 -19837708 + SSU-rRNA_Dme rRNA rRNA 558 1334 -661 8 654 4471 2 0 0 chrUextra 9167048 9167560 -19837096 - LSU-rRNA_Dme rRNA rRNA -749 3151 2640 8 654 2216 0 4 8 chrUextra 9167562 9167827 -19836829 - R1_DM LINE R1 0 5356 5093 8 654 878 0 0 0 chrUextra 9167927 9168029 -19836627 + Invader2_LTR LTR Gypsy 165 266 0 8 654 4789 15 20 0 chrUextra 9168029 9168640 -19836016 + Invader2_I LTR Gypsy 1 623 -3969 8 654 542 0 0 0 chrUextra 9168640 9168706 -19835950 - ACCORD_LTR LTR Gypsy 0 558 493 8 654 246 150 0 0 chrUextra 9168882 9168922 -19835734 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 654 255 125 0 0 chrUextra 9168965 9169005 -19835651 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 654 22 56 0 0 chrUextra 9169018 9169054 -19835602 + AT_rich Low_complexity Low_complexity 1 36 0 8 654 870 9 0 27 chrUextra 9169080 9169192 -19835464 + NTS_DM Other Other 25 133 -107 8 654 1252 18 0 6 chrUextra 9169192 9169357 -19835299 + NTS_DM Other Other 38 201 -39 8 654 870 9 0 27 chrUextra 9169409 9169521 -19835135 + NTS_DM Other Other 25 133 -107 8 654 526 0 16 0 chrUextra 9169521 9169585 -19835071 + NTS_DM Other Other 38 102 -138 8 654 3215 174 11 12 chrUextra 9169687 9170439 -19834217 + SAR_DM Satellite Satellite 326 1076 -396 8 654 2561 118 20 30 chrUextra 9170565 9171340 -19833316 + DMSAT6 Satellite Satellite 1 766 -147 8 654 225 0 0 0 chrUextra 9171443 9171468 -19833188 + (TTGTG)n Simple_repeat Simple_repeat 1 25 0 8 654 4695 6 0 0 chrUextra 9171468 9172013 -19832643 + DMRT1B LINE R1 3536 4080 -1103 8 654 1799 5 0 0 chrUextra 9172009 9172222 -19832434 + DMRT1B LINE R1 4823 5035 -148 8 654 2730 116 5 7 chrUextra 9172524 9172950 -19831706 - HMSBEAGLE_I LTR Gypsy -918 5611 5187 8 654 715 118 0 9 chrUextra 9172988 9173099 -19831557 - HMSBEAGLE_I LTR Gypsy -3139 3390 3281 8 654 2967 197 14 20 chrUextra 9173201 9173980 -19830676 + SAR_DM Satellite Satellite 442 1215 -257 8 654 1597 0 5 0 chrUextra 9174080 9174267 -19830389 - ROO_LTR LTR Pao -240 188 1 8 654 5101 12 0 0 chrUextra 9174267 9174859 -19829797 + IVK_DM LINE I 3264 3855 -1547 8 81 1724 120 0 0 chrUextra 9174959 9175217 -19829439 - Gypsy12_I LTR Gypsy -1083 4463 4206 8 655 3515 89 0 31 chrUextra 9175215 9175738 -19828918 - Gypsy12_I LTR Gypsy -1672 3874 3368 8 655 6825 3 0 0 chrUextra 9175838 9176617 -19828039 + SSU-rRNA_Dme rRNA rRNA 17 795 -1200 8 655 3263 185 10 9 chrUextra 9176723 9177496 -19827160 - SAR_DM Satellite Satellite -396 1076 303 8 655 6757 5 0 0 chrUextra 9177596 9178375 -19826281 + MICROPIA_I LTR Gypsy 3224 4002 -474 8 655 266 19 60 77 chrUextra 9178487 9178604 -19826052 + CT-rich Low_complexity Low_complexity 2 116 0 8 655 610 6 126 0 chrUextra 9178629 9178788 -19825868 + (GA)n Simple_repeat Simple_repeat 2 180 0 8 655 488 119 36 0 chrUextra 9179486 9179570 -19825086 - NTS_DM Other Other -150 90 4 8 655 1301 6 0 18 chrUextra 9179680 9179845 -19824811 - NTS_DM Other Other -78 162 1 8 655 1824 0 21 13 chrUextra 9179845 9180083 -19824573 - NTS_DM Other Other 0 240 1 8 655 264 0 80 60 chrUextra 9180083 9180133 -19824523 - NTS_DM Other Other 0 240 190 8 655 1516 45 0 15 chrUextra 9180234 9180435 -19824221 + R1_DM LINE R1 2046 2243 -3113 8 655 3307 48 2 0 chrUextra 9180591 9181012 -19823644 + Baggins1 LINE LOA 4791 5212 -241 8 655 4663 0 7 2 chrUextra 9181112 9181655 -19823001 + MAX_I LTR Pao 3126 3671 -4243 8 655 1737 166 43 19 chrUextra 9181991 9182765 -19821891 + SAR_DM Satellite Satellite 1 792 -677 8 655 2933 0 0 0 chrUextra 9182870 9183202 -19821454 - ROO_LTR LTR Pao -96 332 1 8 655 3788 0 0 5 chrUextra 9183202 9183649 -19821007 - LSU-rRNA_Dme rRNA rRNA -2830 1070 626 8 655 3734 18 9 2 chrUextra 9183749 9184203 -19820453 - CIRCE LINE Composite -2865 3491 3035 8 655 2406 35 0 37 chrUextra 9184204 9184528 -19820128 - CIRCE LINE Composite -3442 2914 2603 8 655 3060 179 18 27 chrUextra 9184631 9185406 -19819250 - SAR_DM Satellite Satellite -300 1172 405 8 655 44 0 0 0 chrUextra 9185510 9185554 -19819102 + AT_rich Low_complexity Low_complexity 1 44 0 8 655 22 35 0 0 chrUextra 9185729 9185758 -19818898 + AT_rich Low_complexity Low_complexity 1 29 0 8 655 22 35 0 0 chrUextra 9186136 9186165 -19818491 + AT_rich Low_complexity Low_complexity 1 29 0 8 655 3854 29 0 4 chrUextra 9186386 9186879 -19817777 + CIRCE LINE Composite 4490 4980 -1376 8 655 3460 172 8 12 chrUextra 9188148 9188923 -19815733 + SAR_DM Satellite Satellite 246 1017 -455 8 655 6243 33 3 0 chrUextra 9189023 9189802 -19814854 - R1_DM LINE R1 -2007 3349 2569 8 655 5663 49 4 1 chrUextra 9189902 9190665 -19813991 - ZAM_I LTR Gypsy -1838 5652 4888 8 655 3086 163 21 33 chrUextra 9190788 9191544 -19813112 + SAR_DM Satellite Satellite 370 1116 -356 8 655 226 159 15 45 chrUextra 9191489 9191555 -19813101 - XDMR Unknown Unknown 0 361 298 8 655 6005 42 15 1 chrUextra 9191660 9192439 -19812217 - G2_DM LINE Jockey -1723 1379 590 8 655 2796 190 47 4 chrUextra 9192540 9193289 -19811367 + SAR_DM Satellite Satellite 296 1076 -396 8 655 6702 3 1 3 chrUextra 9193418 9194197 -19810459 + SSU-rRNA_Dme rRNA rRNA 570 1347 -648 8 655 2574 210 14 12 chrUextra 9194300 9195032 -19809624 - SAR_DM Satellite Satellite -549 923 191 8 655 687 146 0 21 chrUextra 9194932 9195072 -19809584 + ARS406_DM Unknown Unknown 1 137 -216 8 655 1113 29 0 0 chrUextra 9195817 9195955 -19808701 + G3_DM LINE Jockey 4418 4555 -50 8 655 3711 16 2 0 chrUextra 9196055 9196495 -19808161 + LSU-rRNA_Dme rRNA rRNA 3460 3900 0 8 655 246 150 0 0 chrUextra 9196683 9196723 -19807933 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 655 22 70 0 0 chrUextra 9196736 9196779 -19807877 + AT_rich Low_complexity Low_complexity 1 43 0 8 655 3076 176 20 24 chrUextra 9196934 9197713 -19806943 + SAR_DM Satellite Satellite 377 1152 -320 8 655 6645 4 1 0 chrUextra 9197815 9198592 -19806064 - Invader2_I LTR Gypsy -3079 1513 736 8 655 1154 110 0 15 chrUextra 9198883 9199225 -19805431 + (CTATT)n Simple_repeat Simple_repeat 1 337 0 8 655 1474 9 0 17 chrUextra 9199227 9199467 -19805189 + (TTCTC)n Simple_repeat Simple_repeat 1 235 0 8 655 2239 24 10 10 chrUextra 9199571 9199871 -19804785 - BATUMI_I LTR Pao -1237 6726 6427 8 655 3663 18 0 2 chrUextra 9199894 9200350 -19804306 + BATUMI_I LTR Pao 7303 7757 -206 8 655 3314 221 22 14 chrUextra 9200450 9202108 -19802548 + SAR_DM Satellite Satellite 1 1672 -500 8 655 28 0 0 0 chrUextra 9202412 9202440 -19802216 + AT_rich Low_complexity Low_complexity 1 28 0 8 655 818 0 0 0 chrUextra 9203087 9203180 -19801476 + LSU-rRNA_Dme rRNA rRNA 3808 3900 0 8 655 27 29 0 0 chrUextra 9203252 9203286 -19801370 + AT_rich Low_complexity Low_complexity 1 34 0 8 655 22 56 0 0 chrUextra 9203350 9203386 -19801270 + AT_rich Low_complexity Low_complexity 1 36 0 8 655 246 150 0 0 chrUextra 9203391 9203431 -19801225 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 655 246 150 0 0 chrUextra 9203483 9203523 -19801133 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 655 255 125 0 0 chrUextra 9203566 9203606 -19801050 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 655 22 56 0 0 chrUextra 9203619 9203655 -19801001 + AT_rich Low_complexity Low_complexity 1 36 0 8 655 870 9 0 27 chrUextra 9203681 9203793 -19800863 + NTS_DM Other Other 25 133 -107 8 655 632 0 0 0 chrUextra 9203793 9203866 -19800790 + NTS_DM Other Other 38 110 -130 8 655 2884 189 24 11 chrUextra 9203970 9204707 -19799949 - SAR_DM Satellite Satellite -535 937 191 8 655 648 158 0 8 chrUextra 9204609 9204743 -19799913 + ARS406_DM Unknown Unknown 1 133 -220 8 655 1668 133 38 12 chrUextra 9204851 9205171 -19799485 + Invader1_LTR LTR Gypsy 96 423 0 8 655 283 357 17 17 chrUextra 9205310 9205612 -19799044 + MICROPIA_I LTR Gypsy 772 1073 -3403 8 655 445 271 0 0 chrUextra 9207482 9207615 -19797041 - DM297_I LTR Gypsy -2049 4118 3986 8 655 2219 261 0 0 chrUextra 9207633 9208261 -19796395 - ROVER-I_DM LTR Gypsy -2549 4035 3408 8 655 2446 98 36 17 chrUextra 9208363 9209110 -19795546 + DMSAT6 Satellite Satellite 1 760 -167 8 655 3178 169 19 30 chrUextra 9209240 9210006 -19794650 - SAR_DM Satellite Satellite -1051 758 1 8 655 611 76 0 21 chrUextra 9210119 9210213 -19794443 + R1_DM LINE R1 1517 1608 -3748 8 655 2716 48 158 1 chrUextra 9210207 9210898 -19793758 + R1_DM LINE R1 1081 1879 -3477 8 655 5776 1 0 34 chrUextra 9211051 9211777 -19792879 + LSU-rRNA_Dme rRNA rRNA 1 701 -3199 8 655 6465 7 1 3 chrUextra 9211877 9212652 -19792004 + BS LINE Jockey 1435 2208 -2918 8 655 450 0 0 0 chrUextra 9212756 9212808 -19791848 - MICROPIA_I LTR Gypsy -4424 52 1 8 655 3930 2 0 61 chrUextra 9212808 9213315 -19791341 - MICROPIA_LTR LTR Gypsy 0 476 1 8 655 1515 14 19 14 chrUextra 9213315 9213531 -19791125 + ACCORD2_I LTR Gypsy 1081 1297 -5915 8 655 63 26 0 0 chrUextra 9214171 9214248 -19790408 + AT_rich Low_complexity Low_complexity 1 77 0 8 655 4146 121 8 11 chrUextra 9214515 9215293 -19789363 + BATUMI_I LTR Pao 4281 5035 -2879 8 655 666 25 0 0 chrUextra 9215393 9215473 -19789183 + (ATAAG)n Simple_repeat Simple_repeat 1 80 0 8 655 1157 101 11 0 chrUextra 9215473 9215650 -19789006 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 8 655 957 76 0 0 chrUextra 9215650 9215780 -19788876 + (GGAGA)n Simple_repeat Simple_repeat 5 135 0 8 655 6566 0 1 0 chrUextra 9216273 9217051 -19787605 + ROO_I LTR Pao 4461 5239 -3017 8 655 1238 26 0 0 chrUextra 9217151 9217306 -19787350 - QUASIMODO_I LTR Gypsy -4085 1975 1821 8 655 4241 61 2 8 chrUextra 9217315 9217930 -19786726 - QUASIMODO_I LTR Gypsy -4450 1610 1000 8 655 3614 59 42 0 chrUextra 9218236 9218809 -19785847 - PROTOP_A DNA P 0 1105 573 8 655 4000 2 0 2 chrUextra 9218909 9219398 -19785258 - I_DM LINE I -5644 587 100 8 655 2458 0 0 3 chrUextra 9219401 9219688 -19784968 + LSU-rRNA_Dme rRNA rRNA 2875 3160 -740 8 655 3149 176 19 26 chrUextra 9220667 9221444 -19783212 + SAR_DM Satellite Satellite 439 1210 -262 8 655 4562 9 79 0 chrUextra 9221549 9222325 -19782331 - Invader2_I LTR Gypsy -2760 1832 996 8 655 1479 137 26 11 chrUextra 9223305 9223570 -19781086 + MDG1_LTR LTR Gypsy 144 412 -30 8 655 3089 132 30 0 chrUextra 9223575 9224083 -19780573 + IDEFIX_I LTR Gypsy 4800 5322 -306 8 655 5217 95 4 25 chrUextra 9224183 9224951 -19779705 + HETA LINE telomeric 5327 6078 -3 8 655 3454 189 17 8 chrUextra 9225061 9225839 -19778817 + SAR_DM Satellite Satellite 220 1004 -468 8 655 285 106 0 21 chrUextra 9225962 9226010 -19778646 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 8 655 270 246 92 92 chrUextra 9226585 9226715 -19777941 - Invader1_LTR LTR Gypsy -55 368 239 8 655 3570 185 8 8 chrUextra 9226823 9227574 -19777082 - SAR_DM Satellite Satellite -396 1076 326 8 655 801 33 0 0 chrUextra 9227695 9227787 -19776869 - MAX_LTR LTR Pao -229 92 1 8 655 4750 35 48 48 chrUextra 9227792 9228473 -19776183 - MAX_I LTR Pao -2 7912 7232 8 655 27 49 0 0 chrUextra 9228584 9228625 -19776031 + AT_rich Low_complexity Low_complexity 1 41 0 8 655 534 119 36 0 chrUextra 9228899 9228983 -19775673 - NTS_DM Other Other -150 90 4 8 655 1383 12 0 18 chrUextra 9229093 9229258 -19775398 - NTS_DM Other Other -78 162 1 8 655 677 0 43 32 chrUextra 9229258 9229351 -19775305 - NTS_DM Other Other 0 240 147 8 655 630 0 0 0 chrUextra 9229451 9229521 -19775135 + (GAGAA)n Simple_repeat Simple_repeat 4 73 0 8 655 6713 28 0 0 chrUextra 9230329 9231107 -19773549 - R1_DM LINE R1 -2259 3097 2320 8 655 6669 30 6 0 chrUextra 9231207 9231985 -19772671 + R1_DM LINE R1 1345 2127 -3229 8 655 3288 191 33 8 chrUextra 9232109 9232860 -19771796 - SAR_DM Satellite Satellite -425 1047 278 8 655 534 119 36 0 chrUextra 9233009 9233093 -19771563 - NTS_DM Other Other -150 90 4 8 655 1401 6 0 18 chrUextra 9233203 9233368 -19771288 - NTS_DM Other Other -78 162 1 8 655 1970 8 17 13 chrUextra 9233368 9233607 -19771049 - NTS_DM Other Other 0 240 1 8 655 988 0 30 22 chrUextra 9233607 9233741 -19770915 - NTS_DM Other Other 0 240 106 8 655 6425 0 0 0 chrUextra 9233841 9234533 -19770123 - BARI_DM DNA Tc1 -1033 695 4 8 655 743 23 0 0 chrUextra 9234533 9234619 -19770037 - BARI_DM DNA Tc1 -1 1727 1642 8 655 6464 39 0 1 chrUextra 9234719 9235497 -19769159 - MDG1_I LTR Gypsy -2704 3892 3116 8 655 3625 187 14 8 chrUextra 9235597 9236374 -19768282 - SAR_DM Satellite Satellite -470 1002 221 8 655 3753 171 14 18 chrUextra 9237353 9238131 -19766525 + SAR_DM Satellite Satellite 227 1001 -471 8 655 7131 1 0 1 chrUextra 9238231 9239009 -19765647 - ROO_I LTR Pao -2532 5724 4948 8 655 6018 20 55 1 chrUextra 9239109 9239887 -19764769 - R1_DM LINE R1 -1200 4156 3337 8 655 877 64 22 0 chrUextra 9240554 9240763 -19763893 + PROTOP_B DNA P 570 754 -399 8 655 6967 10 4 1 chrUextra 9240865 9241643 -19763013 + IVK_DM LINE I 3211 3990 -1412 8 655 1818 183 19 25 chrUextra 9241744 9242521 -19762135 - SAR_DM Satellite Satellite -593 772 1 8 655 7005 1 4 0 chrUextra 9242621 9243399 -19761257 - ROO_I LTR Pao -5012 3244 2464 8 655 3440 186 9 19 chrUextra 9243499 9244274 -19760382 - SAR_DM Satellite Satellite -539 933 167 8 655 6519 30 1 15 chrUextra 9244377 9245155 -19759501 + BATUMI_I LTR Pao 1202 1968 -5995 8 655 3424 5 5 0 chrUextra 9245255 9245631 -19759025 - LSU-rRNA_Dme rRNA rRNA -883 3017 2640 8 655 3715 5 0 0 chrUextra 9245629 9246033 -19758623 - R1_DM LINE R1 0 5356 4953 8 655 6786 14 5 1 chrUextra 9246133 9246911 -19757745 - R1_DM LINE R1 -1137 4219 3439 8 655 25 48 0 46 chrUextra 9247294 9247359 -19757297 + AT_rich Low_complexity Low_complexity 1 62 0 8 655 27 29 0 0 chrUextra 9247473 9247507 -19757149 + AT_rich Low_complexity Low_complexity 1 34 0 8 655 392 23 0 0 chrUextra 9247746 9247789 -19756867 + Baggins1 LINE LOA 4727 4769 -684 8 655 4308 2 2 0 chrUextra 9247891 9248358 -19756298 - LSU-rRNA_Dme rRNA rRNA -793 3107 2640 8 655 2850 0 0 3 chrUextra 9248356 9248667 -19755989 - R1_DM LINE R1 0 5356 5047 8 655 3910 62 10 31 chrUextra 9248767 9249285 -19755371 - Gypsy10_I LTR Gypsy -1981 3297 2791 8 655 2053 76 4 0 chrUextra 9249281 9249545 -19755111 - Gypsy10_I LTR Gypsy -3001 2277 2013 8 655 2520 116 33 5 chrUextra 9249653 9250422 -19754234 - DMSAT6 Satellite Satellite -30 790 1 8 655 7198 3 1 0 chrUextra 9250523 9251301 -19753355 - STALKER4_I LTR Gypsy -1982 4548 3770 8 655 2326 91 24 24 chrUextra 9251401 9252012 -19752644 + STALKER4_I LTR Gypsy 664 1341 -5189 8 655 1490 24 0 0 chrUextra 9252012 9252178 -19752478 + BLOOD_LTR LTR Gypsy 1 166 -233 8 655 3496 167 25 26 chrUextra 9252283 9253057 -19751599 - SAR_DM Satellite Satellite -320 1152 380 8 655 3512 107 91 42 chrUextra 9253158 9253891 -19750765 + BATUMI_I LTR Pao 1 769 -7194 8 655 1352 24 0 12 chrUextra 9254035 9254203 -19750453 - CIRCE LINE Composite -1210 5146 4981 8 655 2184 24 0 4 chrUextra 9254560 9254813 -19749843 - CIRCE LINE Composite -1376 4980 4729 8 655 4591 91 8 4 chrUextra 9254913 9255691 -19748965 + G2_DM LINE Jockey 4 533 -2569 8 655 6951 4 13 0 chrUextra 9255791 9256569 -19748087 - DM176_I LTR Gypsy -2504 3916 3129 8 655 6082 41 29 10 chrUextra 9256669 9257441 -19747215 - R1_DM LINE R1 -3926 1430 645 8 655 4354 13 107 8 chrUextra 9257547 9258325 -19746331 - DOC2_DM LINE Jockey -125 4668 3814 8 655 240 172 46 15 chrUextra 9258591 9258656 -19746000 - HMSBEAGLE_I LTR Gypsy -6308 221 155 8 655 376 87 293 13 chrUextra 9258884 9259016 -19745640 - HMSBEAGLE_I LTR Gypsy -6308 221 1 8 655 766 193 0 7 chrUextra 9259015 9259161 -19745495 - DMLTR5 LTR Gypsy 0 266 122 8 655 1931 9 5 0 chrUextra 9260181 9260400 -19744256 - Gypsy4_I LTR Gypsy -6068 220 1 8 655 2600 17 0 0 chrUextra 9260400 9260687 -19743969 - Gypsy4_LTR LTR Gypsy 0 287 1 8 655 536 55 568 0 chrUextra 9261060 9261218 -19743438 + PROTOP_B DNA P 609 856 -297 8 655 3006 162 8 10 chrUextra 9261206 9261808 -19742848 - Jockey2 LINE Jockey -1608 1820 1419 8 655 6035 33 8 33 chrUextra 9261937 9262715 -19741941 - DOC2_DM LINE Jockey -3649 1144 387 8 655 224 156 0 43 chrUextra 9263544 9263591 -19741065 + (CGAGT)n Simple_repeat Simple_repeat 3 47 0 8 655 4623 0 0 0 chrUextra 9263693 9264193 -19740463 + NOMAD_LTR LTR Gypsy 19 518 0 8 655 2069 39 60 0 chrUextra 9264193 9264471 -19740185 - PROTOP DNA P -3727 753 459 8 655 2579 101 49 15 chrUextra 9264571 9265349 -19739307 + DMSAT6 Satellite Satellite 1 804 -87 8 655 3430 179 26 11 chrUextra 9265466 9266206 -19738450 - SAR_DM Satellite Satellite -396 1076 326 8 655 188 111 28 0 chrUextra 9266571 9266607 -19738049 + (TC)n Simple_repeat Simple_repeat 1 37 0 8 655 6898 21 0 0 chrUextra 9267205 9267983 -19736673 + R1_DM LINE R1 1628 2405 -2951 8 655 7083 9 3 0 chrUextra 9268083 9268861 -19735795 + Gypsy4_I LTR Gypsy 511 1290 -4998 8 655 3818 14 0 5 chrUextra 9268961 9269396 -19735260 - G_DM LINE Jockey -31 4315 3883 8 655 2975 15 0 0 chrUextra 9269394 9269737 -19734919 - G_DM LINE Jockey -712 3634 3292 8 655 5762 20 12 90 chrUextra 9269852 9270617 -19734039 + CIRCE LINE Composite 5328 6032 -324 8 655 3194 204 31 8 chrUextra 9270718 9271495 -19733161 - SAR_DM Satellite Satellite -460 1012 218 8 655 719 299 74 38 chrUextra 9271727 9271844 -19732812 - GTWIN_I LTR Gypsy -3195 2972 2815 8 655 1515 30 64 0 chrUextra 9271844 9272047 -19732609 - TLD2 Unknown Unknown -2 216 1 8 655 719 299 74 38 chrUextra 9272047 9272372 -19732284 - GTWIN_I LTR Gypsy -3195 2814 2372 8 655 3871 174 8 9 chrUextra 9272475 9273246 -19731410 + SAR_DM Satellite Satellite 278 1047 -425 8 655 3301 182 14 21 chrUextra 9273351 9274129 -19730527 - SAR_DM Satellite Satellite -599 772 1 8 655 2295 173 9 8 chrUextra 9274229 9275007 -19729649 + SAR_DM Satellite Satellite 1 779 -558 8 655 6727 26 3 0 chrUextra 9275985 9276763 -19727893 + R1_DM LINE R1 2938 3717 -1639 8 655 3369 181 19 29 chrUextra 9276863 9277632 -19727024 + SAR_DM Satellite Satellite 430 1191 -281 8 655 253 33 0 0 chrUextra 9277611 9277641 -19727015 - ARS406_DM Unknown Unknown -167 186 157 8 655 5605 56 4 8 chrUextra 9277741 9278518 -19726138 + R1_DM LINE R1 178 951 -4405 8 655 494 16 0 15 chrUextra 9278618 9278683 -19725973 - DMRT1B LINE R1 -5119 64 1 8 655 2388 133 20 0 chrUextra 9278900 9279389 -19725267 - TART_B1 LINE telomeric -8410 2244 1746 8 655 2569 88 19 5 chrUextra 9279495 9280272 -19724384 - DMSAT6 Satellite Satellite -50 788 1 8 655 6659 8 0 0 chrUextra 9280372 9281149 -19723507 - Gypsy4_I LTR Gypsy -4112 2176 1400 8 655 1722 57 0 31 chrUextra 9281249 9281503 -19723153 - R1_DM LINE R1 -4609 747 502 8 655 2939 54 5 5 chrUextra 9281502 9281895 -19722761 - R1_DM LINE R1 -4963 393 1 8 655 830 20 0 0 chrUextra 9281928 9282026 -19722630 - R1_DM LINE R1 0 5356 5259 8 655 6723 3 0 3 chrUextra 9282126 9282903 -19721753 + SSU-rRNA_Dme rRNA rRNA 123 897 -1098 8 655 6745 4 0 0 chrUextra 9283003 9283780 -19720876 - DM1731_I LTR Copia -661 3315 2539 8 655 574 180 0 15 chrUextra 9283880 9284010 -19720646 - ARS406_DM Unknown Unknown -225 128 1 8 655 3057 177 16 22 chrUextra 9283901 9284657 -19719999 + SAR_DM Satellite Satellite 180 930 -542 8 655 5428 2 0 0 chrUextra 9284757 9285379 -19719277 + LSU-rRNA_Dme rRNA rRNA 1960 2581 -1319 8 655 1282 13 0 0 chrUextra 9285377 9285534 -19719122 + R2_DM LINE R2 510 666 -2941 8 655 5779 5 0 0 chrUextra 9285634 9286300 -19718356 + LSU-rRNA_Dme rRNA rRNA 1967 2632 -1268 8 655 923 0 9 0 chrUextra 9286300 9286411 -19718245 + R1_DM LINE R1 1 112 -5244 8 655 6851 0 0 0 chrUextra 9286511 9287288 -19717368 + Invader6_I LTR Gypsy 144 920 -3179 8 655 6563 3 0 1 chrUextra 9287388 9288165 -19716491 - ROO_I LTR Pao -1451 6805 6030 8 655 3324 177 9 13 chrUextra 9288268 9289040 -19715616 + SAR_DM Satellite Satellite 293 1061 -411 8 655 2897 3 0 0 chrUextra 9289142 9289476 -19715180 + LSU-rRNA_Dme rRNA rRNA 3567 3900 0 8 655 22 56 0 0 chrUextra 9289548 9289584 -19715072 + AT_rich Low_complexity Low_complexity 1 36 0 8 655 246 150 0 0 chrUextra 9289589 9289629 -19715027 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 655 246 150 0 0 chrUextra 9289681 9289721 -19714935 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 655 255 125 0 0 chrUextra 9289764 9289804 -19714852 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 655 22 56 0 0 chrUextra 9289817 9289853 -19714803 + AT_rich Low_complexity Low_complexity 1 36 0 8 655 285 0 0 75 chrUextra 9289879 9289919 -19714737 + NTS_DM Other Other 25 61 -179 8 655 4242 100 4 24 chrUextra 9290045 9290741 -19713915 + S_DM DNA Tc1 1055 1736 0 8 655 448 48 16 0 chrUextra 9290741 9290796 -19713860 + CIRCE LINE Composite 4493 4548 -1808 8 655 3413 43 7 2 chrUextra 9290896 9291336 -19713320 + G5_DM LINE Jockey 1429 1870 -2986 8 655 2999 14 0 0 chrUextra 9291315 9291673 -19712983 + G5_DM LINE Jockey 2604 2961 -1895 8 655 259 131 234 0 chrUextra 9291824 9291961 -19712695 + (CTAAA)n Simple_repeat Simple_repeat 5 173 0 8 655 259 131 234 0 chrUextra 9292200 9292337 -19712319 + (CTAAA)n Simple_repeat Simple_repeat 5 173 0 8 655 2908 136 31 4 chrUextra 9292651 9293244 -19711412 + BS3_DM LINE Jockey 1 421 -1369 8 655 1493 69 10 0 chrUextra 9293225 9293427 -19711229 + BS3_DM LINE Jockey 526 729 -1061 8 655 2678 193 57 26 chrUextra 9293527 9294304 -19710352 + SAR_DM Satellite Satellite 430 1230 -242 8 655 6119 12 0 1 chrUextra 9294404 9295148 -19709508 + PROTOP_A DNA P 363 1105 0 8 655 262 61 0 0 chrUextra 9295148 9295181 -19709475 + Gypsy12_I LTR Gypsy 909 941 -4605 8 655 2279 103 29 32 chrUextra 9295281 9296051 -19708605 + DMSAT6 Satellite Satellite 1 766 -155 8 655 324 328 16 11 chrUextra 9296169 9296360 -19708296 - BLASTOPIA_I LTR Gypsy -749 3732 3541 8 655 357 283 18 25 chrUextra 9296697 9296860 -19707796 - MDG3_I LTR Gypsy -1562 3424 3263 8 655 6602 1 0 0 chrUextra 9297035 9297812 -19706844 + BLOOD_I LTR Gypsy 1479 2255 -4358 8 655 2333 110 15 31 chrUextra 9297912 9298689 -19705967 - DMSAT6 Satellite Satellite -113 764 1 8 655 6619 1 0 0 chrUextra 9298789 9299566 -19705090 + ROO_I LTR Pao 3687 4463 -3793 8 655 5395 53 39 34 chrUextra 9299666 9300439 -19704217 - CIRCE LINE Composite -5577 779 3 8 655 297 28 0 0 chrUextra 9300543 9300579 -19704077 - Gypsy3_I LTR Gypsy -250 5927 5892 8 655 4769 84 21 3 chrUextra 9300581 9301320 -19703336 - Gypsy3_I LTR Gypsy -286 6726 5276 8 655 2221 175 32 10 chrUextra 9301432 9302197 -19702459 + SAR_DM Satellite Satellite 1 781 -1037 8 655 1252 18 0 6 chrUextra 9302326 9302491 -19702165 - NTS_DM Other Other -39 201 38 8 655 870 9 0 27 chrUextra 9302491 9302603 -19702053 - NTS_DM Other Other -107 133 25 8 655 22 56 0 0 chrUextra 9302629 9302665 -19701991 + AT_rich Low_complexity Low_complexity 1 36 0 8 655 255 125 0 0 chrUextra 9302678 9302718 -19701938 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 655 246 150 0 0 chrUextra 9302761 9302801 -19701855 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 655 246 150 0 0 chrUextra 9302853 9302893 -19701763 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 655 246 150 0 0 chrUextra 9302945 9302985 -19701671 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 655 22 56 0 0 chrUextra 9302990 9303026 -19701630 + AT_rich Low_complexity Low_complexity 1 36 0 8 655 2738 216 24 34 chrUextra 9303212 9303949 -19700707 + ROVER-I_DM LTR Gypsy 1689 2418 -4166 8 655 6097 28 0 1 chrUextra 9304051 9304828 -19699828 + PROTOP_A DNA P 281 1056 -49 8 655 1991 4 0 4 chrUextra 9304928 9305168 -19699488 - Copia_I LTR Copia -4354 239 1 8 655 2297 0 0 0 chrUextra 9305168 9305444 -19699212 - Copia_LTR LTR Copia 0 276 1 8 655 2270 8 4 0 chrUextra 9305444 9305703 -19698953 - SSU-rRNA_Dme rRNA rRNA -28 1967 1708 8 81 6476 4 1 0 chrUextra 9305805 9306582 -19698074 + STALKER4_I LTR Gypsy 3061 3838 -2692 8 656 2948 199 21 23 chrUextra 9306690 9307458 -19697198 - HETA LINE telomeric -1704 4377 3612 8 656 3374 170 13 18 chrUextra 9307561 9308336 -19696320 - SAR_DM Satellite Satellite -369 1103 333 8 656 319 299 16 16 chrUextra 9308845 9308974 -19695682 - DIVER2_I LTR Pao -1779 2368 2240 8 656 343 255 27 18 chrUextra 9309101 9309213 -19695443 - DIVER2_I LTR Pao -2328 1819 1707 8 656 6240 1 0 32 chrUextra 9309313 9310090 -19694566 - LSU-rRNA_Dme rRNA rRNA -3118 782 31 8 656 571 99 0 11 chrUextra 9310207 9310299 -19694357 + DMRT1B LINE R1 155 245 -4938 8 656 299 230 126 0 chrUextra 9310878 9310965 -19693691 - Gypsy12_I LTR Gypsy -2217 3329 3232 8 656 3742 2 0 0 chrUextra 9311092 9311520 -19693136 - ROO_LTR LTR Pao 0 428 1 8 656 1620 0 0 3 chrUextra 9311520 9311814 -19692842 + (TTATA)n Simple_repeat Simple_repeat 1 293 0 8 656 309 51 0 0 chrUextra 9313444 9313483 -19691173 + (TA)n Simple_repeat Simple_repeat 1 39 0 8 656 4484 2 4 0 chrUextra 9313698 9314215 -19690441 + LSU-rRNA_Dme rRNA rRNA 3382 3900 0 8 656 27 29 0 0 chrUextra 9314287 9314321 -19690335 + AT_rich Low_complexity Low_complexity 1 34 0 8 656 230 175 0 0 chrUextra 9314415 9314455 -19690201 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 656 3052 11 0 0 chrUextra 9314575 9314942 -19689714 + FW_DM LINE Jockey 4326 4692 0 8 656 600 193 46 23 chrUextra 9314977 9315152 -19689504 + TART LINE telomeric 9364 9542 -4935 8 656 828 54 0 0 chrUextra 9315162 9315274 -19689382 + HETA LINE telomeric 5965 6076 -5 8 656 28 29 0 0 chrUextra 9315317 9315352 -19689304 + AT_rich Low_complexity Low_complexity 1 35 0 8 656 6619 1 1 0 chrUextra 9315455 9316229 -19688427 + DOC LINE Jockey 1411 2185 -2540 8 656 6220 26 19 3 chrUextra 9316329 9317105 -19687551 + R1_DM LINE R1 4015 4803 -553 8 656 270 125 21 0 chrUextra 9317301 9317349 -19687307 - NTS_DM Other Other -191 49 1 8 656 549 183 44 28 chrUextra 9317349 9317529 -19687127 - NTS_DM Other Other 0 240 58 8 656 917 130 0 0 chrUextra 9317543 9317697 -19686959 - NTS_DM Other Other -86 154 1 8 656 248 146 21 0 chrUextra 9317779 9317827 -19686829 - NTS_DM Other Other -191 49 1 8 656 582 126 45 32 chrUextra 9317827 9317983 -19686673 - NTS_DM Other Other 0 240 83 8 656 6231 6 9 3 chrUextra 9318083 9318860 -19685796 - ROO_I LTR Pao -7388 868 87 8 656 6764 4 0 0 chrUextra 9318960 9319737 -19684919 + Invader1_I LTR Gypsy 1186 1962 -1224 8 656 1474 32 0 7 chrUextra 9319841 9320126 -19684530 + (GAGAA)n Simple_repeat Simple_repeat 1 283 0 8 656 6503 8 1 0 chrUextra 9320714 9321491 -19683165 - DMRT1A LINE R1 -3656 1527 750 8 656 408 17 0 33 chrUextra 9321591 9321652 -19683004 - DMSAT6 Satellite Satellite -83 387 329 8 656 3244 177 14 23 chrUextra 9322468 9323244 -19681412 + SAR_DM Satellite Satellite 274 1042 -430 8 656 842 0 0 10 chrUextra 9323345 9323445 -19681211 - LSU-rRNA_Dme rRNA rRNA -2014 1886 1788 8 656 5268 3 5 5 chrUextra 9323489 9324122 -19680534 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1156 8 656 5992 39 13 3 chrUextra 9324222 9324998 -19679658 - R1_DM LINE R1 -3941 1415 632 8 656 2204 119 24 44 chrUextra 9325118 9325876 -19678780 + DMSAT6 Satellite Satellite 1 742 -3 8 656 5659 30 154 0 chrUextra 9325976 9326753 -19677903 - MAX_I LTR Pao -5629 2285 1389 8 656 6565 13 1 0 chrUextra 9326853 9327630 -19677026 + Gypsy4_I LTR Gypsy 338 1115 -5173 8 656 581 200 7 15 chrUextra 9327863 9328000 -19676656 + HETRP_DM Satellite Satellite 1529 1664 -208 8 656 655 186 7 14 chrUextra 9328168 9328310 -19676346 + HETRP_DM Satellite Satellite 1529 1669 -203 8 656 192 40 0 0 chrUextra 9328441 9328466 -19676190 + (GA)n Simple_repeat Simple_repeat 2 26 0 8 656 3742 2 0 0 chrUextra 9328607 9329035 -19675621 - ROO_LTR LTR Pao 0 428 1 8 656 215 351 0 0 chrUextra 9329153 9329227 -19675429 + C-rich Low_complexity Low_complexity 5 78 0 8 656 6502 8 0 1 chrUextra 9329484 9330261 -19674395 + BURDOCK_I LTR Gypsy 67 842 -5018 8 656 1551 170 25 16 chrUextra 9330361 9331045 -19673611 - SAR_DM Satellite Satellite -659 689 1 8 656 235 146 0 0 chrUextra 9331391 9331432 -19673224 - DMCR1A LINE CR1 -3686 784 744 8 656 579 138 43 17 chrUextra 9331499 9331699 -19672957 + DMCR1A LINE CR1 365 460 -4010 8 656 2198 20 7 0 chrUextra 9331718 9332015 -19672641 + DOC5_DM LINE Jockey 3979 4277 -405 8 656 259 146 21 0 chrUextra 9332165 9332213 -19672443 + NTS_DM Other Other 1 49 -191 8 656 802 115 0 0 chrUextra 9332311 9332441 -19672215 + NTS_DM Other Other 8 137 -103 8 656 404 121 70 39 chrUextra 9332449 9332578 -19672078 + NTS_DM Other Other 108 240 0 8 656 1000 116 0 6 chrUextra 9332716 9332890 -19671766 + NTS_DM Other Other 1 173 -67 8 656 3337 178 8 19 chrUextra 9332992 9333762 -19670894 - SAR_DM Satellite Satellite -466 1006 246 8 656 256 128 0 0 chrUextra 9333722 9333769 -19670887 + ARS406_DM Unknown Unknown 1 47 -306 8 656 2998 0 0 0 chrUextra 9333869 9334210 -19670446 + TABOR_LTR LTR Gypsy 166 506 0 8 656 1611 171 104 26 chrUextra 9334231 9334646 -19670010 + TART LINE telomeric 8983 9429 -5048 8 656 22 70 0 0 chrUextra 9334788 9334831 -19669825 + AT_rich Low_complexity Low_complexity 1 43 0 8 656 1003 101 252 0 chrUextra 9334923 9335180 -19669476 + DNAREP1_DM LINE Penelope 273 594 0 8 656 6658 9 0 0 chrUextra 9335623 9336400 -19668256 - DM1731_I LTR Copia -251 3725 2949 8 656 445 190 17 8 chrUextra 9336527 9336644 -19668012 - ARS406_DM Unknown Unknown -235 118 1 8 656 907 180 41 16 chrUextra 9336541 9336784 -19667872 + SAR_DM Satellite Satellite 541 789 -683 8 656 1070 182 25 8 chrUextra 9336795 9337267 -19667389 + SAR_DM Satellite Satellite 1 479 -680 8 656 5614 28 8 22 chrUextra 9337377 9338154 -19666502 - Gypsy12_LTR LTR Gypsy -587 1749 984 8 656 6394 18 1 6 chrUextra 9338254 9339031 -19665625 + BATUMI_I LTR Pao 5534 6306 -1657 8 656 2855 6 0 0 chrUextra 9339131 9339461 -19665195 + DMRT1B LINE R1 4854 5183 0 8 656 369 194 53 53 chrUextra 9339612 9339743 -19664913 - Copia_I LTR Copia -58 4535 4405 8 656 22 56 0 0 chrUextra 9339788 9339824 -19664832 + AT_rich Low_complexity Low_complexity 1 36 0 8 656 4984 30 0 3 chrUextra 9340008 9340643 -19664013 - IDEFIX_I LTR Gypsy -3159 2469 1837 8 656 909 44 7 21 chrUextra 9340644 9340784 -19663872 - IDEFIX_LTR LTR Gypsy -20 574 437 8 656 335 296 19 19 chrUextra 9341205 9341367 -19663289 - MDG3_I LTR Gypsy -1562 3424 3263 8 656 6404 21 0 1 chrUextra 9341760 9342532 -19662124 + R1_DM LINE R1 3909 4679 -677 8 656 6503 8 3 9 chrUextra 9342636 9343412 -19661244 - MICROPIA_I LTR Gypsy -1413 3063 2293 8 656 588 6 0 137 chrUextra 9343516 9343721 -19660935 + (TAAAAA)n Simple_repeat Simple_repeat 2 178 0 8 656 278 136 136 0 chrUextra 9343669 9343787 -19660869 + (CAAA)n Simple_repeat Simple_repeat 2 135 0 8 656 1652 280 13 12 chrUextra 9344388 9345144 -19659512 - Stalker2_I LTR Gypsy -3344 4058 3302 8 656 2434 110 20 19 chrUextra 9345264 9346025 -19658631 - DMSAT6 Satellite Satellite -28 761 1 8 656 3741 42 42 0 chrUextra 9346140 9346658 -19657998 + PROTOP_A DNA P 570 1105 0 8 656 1359 191 29 59 chrUextra 9347275 9347719 -19656937 + Gypsy_LTR LTR Gypsy 1 431 -51 8 656 464 0 0 0 chrUextra 9347892 9347945 -19656711 - NTS_DM Other Other -150 90 38 8 656 870 9 0 27 chrUextra 9347945 9348057 -19656599 - NTS_DM Other Other -107 133 25 8 656 1252 18 0 6 chrUextra 9348109 9348274 -19656382 - NTS_DM Other Other -39 201 38 8 656 246 27 0 0 chrUextra 9348274 9348307 -19656349 - NTS_DM Other Other -107 133 101 8 656 2879 3 0 0 chrUextra 9348307 9348637 -19656019 - TRANSPAC_LTR LTR Gypsy 0 330 1 8 656 270 31 0 0 chrUextra 9348636 9348668 -19655988 - TRANSPAC_I LTR Gypsy 0 4590 4559 8 656 21 71 0 0 chrUextra 9349290 9349332 -19655324 + AT_rich Low_complexity Low_complexity 1 42 0 8 656 26 50 0 0 chrUextra 9349356 9349396 -19655260 + AT_rich Low_complexity Low_complexity 1 40 0 8 656 458 133 100 0 chrUextra 9349450 9349540 -19655116 - DNAREP1_DM LINE Penelope 0 594 496 8 656 3326 177 10 13 chrUextra 9349644 9350418 -19654238 - SAR_DM Satellite Satellite -464 1008 237 8 656 2463 211 49 18 chrUextra 9350520 9351296 -19653360 + SAR_DM Satellite Satellite 408 1207 -265 8 656 3215 39 51 63 chrUextra 9351399 9351889 -19652767 - DMCR1A LINE CR1 -3728 742 259 8 656 3160 194 15 21 chrUextra 9352272 9353046 -19651610 + SAR_DM Satellite Satellite 1 769 -208 8 656 6088 18 3 0 chrUextra 9353148 9353924 -19650732 + QUASIMODO_I LTR Gypsy 3073 3850 -2210 8 656 5837 4 0 1 chrUextra 9354900 9355577 -19649079 - R2_DM LINE R2 -2929 678 3 8 656 785 21 0 0 chrUextra 9355581 9355676 -19648980 - LSU-rRNA_Dme rRNA rRNA -1316 2584 2490 8 656 1303 206 43 27 chrUextra 9355779 9356148 -19648508 - G_DM LINE Jockey -2937 1409 1035 8 656 32 0 0 0 chrUextra 9356176 9356208 -19648448 + AT_rich Low_complexity Low_complexity 1 32 0 8 656 1620 0 0 0 chrUextra 9356652 9356946 -19647710 + (GAGAA)n Simple_repeat Simple_repeat 1 294 0 8 656 4034 17 0 0 chrUextra 9356952 9357428 -19647228 + MAX_I LTR Pao 3138 3613 -4301 8 656 764 10 0 59 chrUextra 9357528 9357630 -19647026 - CIRCE LINE Composite -4373 1983 1888 8 656 346 304 25 25 chrUextra 9357535 9357697 -19646959 - Gypsy12_I LTR Gypsy -1550 3996 3835 8 656 3895 48 32 30 chrUextra 9357706 9358265 -19646391 - CIRCE LINE Composite -4474 1882 1323 8 656 284 178 82 41 chrUextra 9358463 9358633 -19646023 + (TAGA)n Simple_repeat Simple_repeat 2 178 0 8 656 270 198 82 47 chrUextra 9358557 9358727 -19645929 + (CAAGA)n Simple_repeat Simple_repeat 3 178 0 8 656 280 174 83 42 chrUextra 9358726 9358959 -19645697 + (TAGA)n Simple_repeat Simple_repeat 1 242 0 8 656 366 153 127 0 chrUextra 9358949 9359106 -19645550 + (CAGA)n Simple_repeat Simple_repeat 2 178 0 8 656 1081 106 14 24 chrUextra 9359290 9359502 -19645154 + TAHRE LINE telomeric 10242 10451 -12 8 656 3851 57 0 16 chrUextra 9359501 9360056 -19644600 + TART LINE telomeric 630 1175 -13302 8 656 6208 29 1 4 chrUextra 9360156 9360932 -19643724 - R1_DM LINE R1 -1382 3974 3201 8 656 6075 25 35 1 chrUextra 9361032 9361808 -19642848 - Gypsy4_I LTR Gypsy -1547 4741 3940 8 656 6385 23 1 0 chrUextra 9361908 9362684 -19641972 - R1_DM LINE R1 -2917 2439 1663 8 656 1200 0 0 0 chrUextra 9362784 9362921 -19641735 - ROO_I LTR Pao -8119 137 1 8 656 3741 2 0 0 chrUextra 9362921 9363349 -19641307 - ROO_LTR LTR Pao 0 428 1 8 656 6533 3 0 0 chrUextra 9363660 9364436 -19640220 + Copia_I LTR Copia 1836 2611 -1982 8 656 3376 240 59 30 chrUextra 9364536 9366188 -19638468 - SAR_DM Satellite Satellite -1087 1699 1 8 656 6509 16 0 0 chrUextra 9366289 9367064 -19637592 - R1_DM LINE R1 -2936 2420 1646 8 656 3088 148 42 36 chrUextra 9367164 9367857 -19636799 + DMRT1C LINE R1 2326 3022 -2421 8 656 606 73 0 0 chrUextra 9367858 9367940 -19636716 + DMRT1C LINE R1 4367 4448 -995 8 656 4259 2 0 0 chrUextra 9368040 9368542 -19636114 - QUASIMODO_I LTR Gypsy -3346 2714 2213 8 656 2460 0 0 3 chrUextra 9368532 9368816 -19635840 - QUASIMODO_I LTR Gypsy -5352 708 426 8 656 334 307 7 7 chrUextra 9369149 9369290 -19635366 + Invader3_I LTR Gypsy 2889 3029 -1859 8 656 239 320 0 0 chrUextra 9369592 9369689 -19634967 + Invader3_I LTR Gypsy 3317 3413 -1475 8 656 1124 37 0 0 chrUextra 9369792 9369954 -19634702 + FW_DM LINE Jockey 4527 4688 -4 8 656 4689 36 34 2 chrUextra 9369955 9370568 -19634088 - R1_DM LINE R1 -3966 1390 758 8 656 2838 173 7 8 chrUextra 9370668 9371285 -19633371 + SAR_DM Satellite Satellite 418 1033 -439 8 656 6522 139 6 25 chrUextra 9371279 9372320 -19632336 + FW_DM LINE Jockey 2375 3395 -1297 8 656 2959 182 18 28 chrUextra 9372422 9373196 -19631460 - SAR_DM Satellite Satellite -300 1172 407 8 656 2909 198 12 19 chrUextra 9373296 9374072 -19630584 - SAR_DM Satellite Satellite -259 1213 444 8 656 26 50 0 0 chrUextra 9374172 9374212 -19630444 + AT_rich Low_complexity Low_complexity 1 40 0 8 656 488 119 36 0 chrUextra 9374486 9374570 -19630086 - NTS_DM Other Other -150 90 4 8 656 1271 6 0 24 chrUextra 9374680 9374846 -19629810 - NTS_DM Other Other -78 162 1 8 656 682 0 39 29 chrUextra 9374846 9374948 -19629708 - NTS_DM Other Other 0 240 138 8 656 373 191 11 11 chrUextra 9375048 9375143 -19629513 + XDMR_DM Unknown Unknown 259 353 -7 8 656 3258 165 11 20 chrUextra 9375064 9375814 -19628842 - SAR_DM Satellite Satellite -352 1120 378 8 656 1968 16 0 89 chrUextra 9375924 9376204 -19628452 - LSU-rRNA_Dme rRNA rRNA -3645 255 1 8 656 22 56 0 0 chrUextra 9376480 9376516 -19628140 + AT_rich Low_complexity Low_complexity 1 36 0 8 656 6080 1 0 0 chrUextra 9376800 9377509 -19627147 - FW_DM LINE Jockey -3981 711 3 8 656 4514 15 54 0 chrUextra 9377676 9378451 -19626205 + DOC2_DM LINE Jockey 2881 3697 -1096 8 656 316 212 92 24 chrUextra 9379114 9379278 -19625378 + (TTCTG)n Simple_repeat Simple_repeat 5 179 0 8 656 3940 70 6 4 chrUextra 9379428 9379977 -19624679 - R1_DM LINE R1 -4784 572 23 8 656 1734 19 0 0 chrUextra 9379998 9380204 -19624452 - R1_DM LINE R1 0 5356 5151 8 656 3429 171 9 10 chrUextra 9380308 9381080 -19623576 + SAR_DM Satellite Satellite 267 1037 -435 8 656 957 231 30 42 chrUextra 9381225 9381586 -19623070 + Gypsy12_LTR LTR Gypsy 899 1255 -1081 8 656 692 234 81 32 chrUextra 9381596 9381941 -19622715 + Gypsy12_LTR LTR Gypsy 1456 1817 -519 8 656 6790 1 0 0 chrUextra 9382058 9382832 -19621824 + Invader4_I LTR Gypsy 178 951 -1462 8 656 3234 175 8 19 chrUextra 9382937 9383693 -19620963 + SAR_DM Satellite Satellite 371 1118 -354 8 656 298 192 30 20 chrUextra 9383607 9383708 -19620948 - XDMR_DM Unknown Unknown 0 360 259 8 656 2283 105 17 53 chrUextra 9383808 9384584 -19620072 + DMSAT6 Satellite Satellite 1 747 -109 8 656 2916 191 30 21 chrUextra 9384684 9385460 -19619196 + SAR_DM Satellite Satellite 422 1204 -268 8 656 624 248 36 73 chrUextra 9385581 9385911 -19618745 + Gypsy12_LTR LTR Gypsy 832 1149 -1187 8 656 29 60 0 0 chrUextra 9385917 9385967 -19618689 + AT_rich Low_complexity Low_complexity 1 50 0 8 656 1660 153 13 10 chrUextra 9386025 9386336 -19618320 + Gypsy12_LTR LTR Gypsy 1774 2085 -251 8 656 811 42 25 8 chrUextra 9386436 9386555 -19618101 + MDG3_LTR LTR Gypsy 147 267 0 8 656 5678 0 1 0 chrUextra 9386554 9387212 -19617444 + MDG3_I LTR Gypsy 1 659 -4327 8 656 4389 41 2 12 chrUextra 9387312 9387879 -19616777 + G5A_DM LINE Jockey 2278 2838 -3 8 656 349 269 0 0 chrUextra 9387906 9388014 -19616642 - Gypsy7_I LTR Gypsy -3317 1667 1560 8 656 3319 0 0 3 chrUextra 9389064 9389425 -19615231 + STALKER4_LTR LTR Gypsy 43 402 0 8 656 2797 82 0 29 chrUextra 9389425 9389840 -19614816 + STALKER4_I LTR Gypsy 1 403 -6127 8 656 7144 4 0 0 chrUextra 9389940 9390716 -19613940 + ACCORD_I LTR Gypsy 2886 3661 -2627 8 656 2529 93 39 18 chrUextra 9390823 9391591 -19613065 + DMSAT6 Satellite Satellite 1 784 -82 8 656 1512 70 8 8 chrUextra 9391692 9392284 -19612372 + (CTATT)n Simple_repeat Simple_repeat 1 592 0 8 656 834 86 20 0 chrUextra 9392312 9392463 -19612193 + (CTATT)n Simple_repeat Simple_repeat 2 155 0 8 656 21 0 0 0 chrUextra 9392769 9392790 -19611866 + AT_rich Low_complexity Low_complexity 1 21 0 8 656 2458 42 19 22 chrUextra 9392815 9393132 -19611524 + NINJA_LTR LTR Pao 1 316 -1 8 656 1581 24 9 24 chrUextra 9393133 9393344 -19611312 + NINJA_I LTR Pao 1 208 -5803 8 656 7222 3 1 0 chrUextra 9393444 9394220 -19610436 - R2_DM LINE R2 -1708 1899 1123 8 656 410 192 0 20 chrUextra 9394320 9394421 -19610235 + XDMR_DM Unknown Unknown 262 360 0 8 656 3874 154 12 22 chrUextra 9394335 9395093 -19609563 - SAR_DM Satellite Satellite -354 1118 369 8 656 5447 27 8 0 chrUextra 9395196 9395829 -19608827 + R1_DM LINE R1 4719 5356 0 8 656 851 55 9 0 chrUextra 9395862 9395972 -19608684 + R1_DM LINE R1 1 111 -5245 8 656 344 342 32 37 chrUextra 9396086 9396532 -19608124 - BLASTOPIA_I LTR Gypsy -703 4185 3541 8 656 225 226 19 0 chrUextra 9396794 9396847 -19607809 - BLASTOPIA_I LTR Gypsy -1300 3181 3128 8 656 2542 111 16 17 chrUextra 9396948 9397709 -19606947 + DMSAT6 Satellite Satellite 1 759 -159 8 656 3171 186 12 4 chrUextra 9397829 9398600 -19606056 + SAR_DM Satellite Satellite 1 776 -1037 8 656 4761 29 0 0 chrUextra 9398700 9399251 -19605405 - PROTOP_A DNA P -554 551 1 8 656 2064 0 0 0 chrUextra 9399581 9399803 -19604853 - LSU-rRNA_Dme rRNA rRNA -3678 222 1 8 656 21 95 0 0 chrUextra 9399815 9399878 -19604778 + AT_rich Low_complexity Low_complexity 1 63 0 8 656 34 24 0 0 chrUextra 9400091 9400132 -19604524 + AT_rich Low_complexity Low_complexity 1 41 0 8 656 4487 76 5 18 chrUextra 9400452 9401067 -19603589 - HETA LINE telomeric -3574 2507 1901 8 656 1319 48 0 29 chrUextra 9401055 9401227 -19603429 - HETA LINE telomeric -4519 1562 1396 8 656 6726 6 25 0 chrUextra 9401328 9402104 -19602552 - IDEFIX_I LTR Gypsy -4365 1263 469 8 656 5068 22 80 5 chrUextra 9402204 9402980 -19601676 + FW_DM LINE Jockey 3535 4368 -324 8 656 2172 0 0 0 chrUextra 9403466 9403706 -19600950 - ALUII_DM Unknown Unknown 0 240 1 8 656 21 57 0 0 chrUextra 9403706 9403741 -19600915 + AT_rich Low_complexity Low_complexity 1 35 0 8 656 268 196 0 19 chrUextra 9403976 9404028 -19600628 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 656 268 196 0 19 chrUextra 9404068 9404120 -19600536 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 656 250 216 0 19 chrUextra 9404160 9404212 -19600444 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 656 278 176 0 19 chrUextra 9404243 9404295 -19600361 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 656 22 56 0 0 chrUextra 9404308 9404344 -19600312 + AT_rich Low_complexity Low_complexity 1 36 0 8 656 936 9 0 27 chrUextra 9404370 9404482 -19600174 + NTS_DM Other Other 25 133 -107 8 656 1350 18 0 6 chrUextra 9404482 9404647 -19600009 + NTS_DM Other Other 38 201 -39 8 656 2935 96 35 0 chrUextra 9404830 9405234 -19599422 + Gypsy12_I LTR Gypsy 3171 3588 -1958 8 656 3133 30 11 0 chrUextra 9405234 9405605 -19599051 + PROTOP_A DNA P 1 375 -730 8 656 4480 109 2 3 chrUextra 9405706 9406480 -19598176 + G_DM LINE Jockey 688 1430 -612 8 656 672 12 75 0 chrUextra 9406677 9406757 -19597899 + PROTOP_B DNA P 1 86 -1067 8 656 1512 143 4 4 chrUextra 9406755 9407007 -19597649 + TART LINE telomeric 3632 3883 -10594 8 656 2287 108 17 17 chrUextra 9406987 9407343 -19597313 + TART LINE telomeric 5323 5678 -8799 8 656 6966 16 3 0 chrUextra 9407455 9408230 -19596426 - BEL_I LTR Pao -209 5195 4419 8 656 669 201 20 0 chrUextra 9408334 9408483 -19596173 + SAR_DM Satellite Satellite 536 687 -785 8 656 289 281 0 0 chrUextra 9408495 9408577 -19596079 - XDMR_DM Unknown Unknown -273 87 6 8 656 3008 173 13 5 chrUextra 9408504 9409104 -19595552 + SAR_DM Satellite Satellite 248 852 -620 8 656 2480 181 13 10 chrUextra 9409205 9409980 -19594676 - SAR_DM Satellite Satellite -675 776 1 8 656 698 166 38 22 chrUextra 9410082 9410273 -19594383 + DNAREP1_DM LINE Penelope 117 332 -262 8 656 332 126 273 11 chrUextra 9410281 9410369 -19594287 + DNAREP1_DM LINE Penelope 222 332 -262 8 656 393 202 17 9 chrUextra 9410349 9410464 -19594192 + DNAREP1_DM LINE Penelope 184 299 -295 8 656 1332 63 132 0 chrUextra 9410520 9410710 -19593946 - DMCR1A LINE CR1 -428 4042 3828 8 656 755 103 206 0 chrUextra 9410729 9410855 -19593801 - DMCR1A LINE CR1 -1159 3311 3160 8 656 5136 45 11 0 chrUextra 9410955 9411572 -19593084 - BS2 LINE Jockey -1376 3345 2722 8 656 421 268 13 13 chrUextra 9411572 9411727 -19592929 + Copia_I LTR Copia 1976 2130 -2463 8 656 3111 183 50 7 chrUextra 9411862 9412582 -19592074 - SAR_DM Satellite Satellite -396 1076 326 8 656 3262 99 6 6 chrUextra 9412705 9413180 -19591476 - TART LINE telomeric -7269 7208 6734 8 656 473 265 66 81 chrUextra 9413208 9413479 -19591177 - TART_B1 LINE telomeric -1448 9206 8940 8 656 6899 3 0 1 chrUextra 9413599 9414355 -19590301 - R1_DM LINE R1 0 5356 4602 8 656 1102 30 0 15 chrUextra 9414455 9414591 -19590065 + QUASIMODO_LTR LTR Gypsy 525 658 0 8 656 2570 156 12 8 chrUextra 9415330 9416104 -19588552 + SAR_DM Satellite Satellite 1 777 -841 8 656 6952 5 0 1 chrUextra 9416205 9416980 -19587676 - MDG1_I LTR Gypsy -1551 5045 4272 8 656 7072 8 0 0 chrUextra 9417080 9417855 -19586801 + Invader3_I LTR Gypsy 2319 3093 -1795 8 656 5584 108 0 1 chrUextra 9417964 9418730 -19585926 + Gypsy12_I LTR Gypsy 3637 4401 -1145 8 656 3624 175 12 9 chrUextra 9418841 9419590 -19585066 + SAR_DM Satellite Satellite 326 1076 -396 8 656 671 84 0 21 chrUextra 9419705 9419802 -19584854 - BATUMI_I LTR Pao -7868 95 1 8 656 2085 47 3 86 chrUextra 9419802 9420126 -19584530 - BATUMI_I LTR Pao -679 7284 6988 8 656 2115 175 11 6 chrUextra 9420117 9420480 -19584176 - ROVER-I_DM LTR Gypsy -1637 4947 4583 8 656 890 19 0 0 chrUextra 9420580 9420684 -19583972 - MICROPIA_LTR LTR Gypsy -141 335 232 8 656 2113 9 0 0 chrUextra 9420713 9420945 -19583711 - MICROPIA_LTR LTR Gypsy -244 232 1 8 656 3498 10 42 2 chrUextra 9420945 9421355 -19583301 - MICROPIA_I LTR Gypsy 0 4476 4051 8 656 1003 70 7 18 chrUextra 9421464 9422226 -19582430 + RSP Satellite Satellite 1 753 -5 8 656 685 71 0 0 chrUextra 9422331 9422428 -19582228 + TART_B1 LINE telomeric 2309 2405 -8249 8 656 243 32 0 0 chrUextra 9422428 9422459 -19582197 + PROTOP_B DNA P 1 31 -1122 8 656 3128 17 0 40 chrUextra 9422457 9422834 -19581822 + PROTOP_A DNA P 728 1089 -16 8 656 1790 110 49 0 chrUextra 9422841 9423105 -19581551 + TART_B1 LINE telomeric 2399 2675 -7979 8 656 253 294 0 0 chrUextra 9423221 9423289 -19581367 - OSVALDO_I LTR Gypsy -4242 2411 2344 8 656 457 298 145 0 chrUextra 9423308 9423556 -19581100 - OSVALDO_I LTR Gypsy -4464 2189 1906 8 656 332 137 173 27 chrUextra 9423554 9423629 -19581027 - Gypsy8_I LTR Gypsy -3330 1017 932 8 656 1492 88 15 0 chrUextra 9423618 9423822 -19580834 - Gypsy8_I LTR Gypsy -3867 480 274 8 656 784 115 32 42 chrUextra 9423790 9423980 -19580676 + DMSAT6 Satellite Satellite 200 387 -83 8 656 6916 3 1 3 chrUextra 9424080 9424855 -19579801 - R1_DM LINE R1 -3615 1741 968 8 656 3656 173 14 21 chrUextra 9424955 9425724 -19578932 + SAR_DM Satellite Satellite 355 1118 -354 8 656 6331 45 1 4 chrUextra 9425830 9426605 -19578051 - R1_DM LINE R1 -3786 1570 798 8 656 5730 21 0 1 chrUextra 9426705 9427361 -19577295 + DMRT1B LINE R1 2957 3611 -1572 8 656 1029 48 0 0 chrUextra 9427355 9427480 -19577176 + DMRT1B LINE R1 3718 3842 -1341 8 656 6812 0 13 0 chrUextra 9427582 9428355 -19576301 - ROO_I LTR Pao -7242 1014 232 8 656 7165 1 3 1 chrUextra 9428455 9429230 -19575426 + LSU-rRNA_Dme rRNA rRNA 3000 3775 -125 8 656 2729 7 7 0 chrUextra 9429330 9429630 -19575026 - MAX_I LTR Pao -7612 302 1 8 656 2909 9 0 0 chrUextra 9429630 9429951 -19574705 - MAX_LTR LTR Pao 0 321 1 8 656 400 145 0 80 chrUextra 9429967 9430042 -19574614 - HETRP_DM Satellite Satellite -286 1586 1518 8 656 7236 1 1 0 chrUextra 9430205 9430980 -19573676 + LSU-rRNA_Dme rRNA rRNA 3012 3787 -113 8 656 3784 64 37 0 chrUextra 9431080 9431624 -19573032 + PROTOP_A DNA P 570 1105 0 8 656 7075 1 1 4 chrUextra 9431955 9432730 -19571926 + LSU-rRNA_Dme rRNA rRNA 694 1466 -2434 8 656 6891 18 1 1 chrUextra 9432830 9433605 -19571051 - R2_DM LINE R2 -768 2839 2065 8 656 3087 170 35 6 chrUextra 9433708 9434480 -19570176 - SAR_DM Satellite Satellite -593 793 1 8 656 1223 298 20 20 chrUextra 9435724 9436230 -19568426 - HMSBEAGLE_I LTR Gypsy -757 5772 5267 8 656 3892 26 53 4 chrUextra 9436333 9436800 -19567856 - Gypsy12_LTR LTR Gypsy -1846 490 1 8 656 2728 13 0 3 chrUextra 9436800 9437105 -19567551 - Gypsy12_I LTR Gypsy 0 5546 5243 8 657 701 13 0 0 chrUextra 9437205 9437282 -19567374 - LSU-rRNA_Dme rRNA rRNA -1184 2716 2640 8 657 1419 7 0 0 chrUextra 9437280 9437434 -19567222 - R1_DM LINE R1 0 5356 5203 8 657 5108 2 0 2 chrUextra 9437427 9437980 -19566676 - LSU-rRNA_Dme rRNA rRNA -1243 2657 2106 8 657 2974 242 22 12 chrUextra 9438081 9438855 -19565801 - TOM_I LTR Gypsy -595 5517 4736 8 657 607 0 14 0 chrUextra 9438955 9439029 -19565627 + NTS_DM Other Other 59 133 -107 8 657 1350 18 0 6 chrUextra 9439029 9439194 -19565462 + NTS_DM Other Other 38 201 -39 8 657 21 57 0 0 chrUextra 9439194 9439229 -19565427 + AT_rich Low_complexity Low_complexity 1 35 0 8 657 898 9 9 27 chrUextra 9439255 9439366 -19565290 + NTS_DM Other Other 25 133 -107 8 657 1540 25 15 20 chrUextra 9439366 9439570 -19565086 + NTS_DM Other Other 38 240 0 8 657 1254 52 0 0 chrUextra 9439570 9439724 -19564932 + NTS_DM Other Other 1 154 -86 8 657 1338 48 0 0 chrUextra 9439924 9440090 -19564566 - Gypsy10_LTR LTR Gypsy -198 166 1 8 657 21 0 0 0 chrUextra 9440121 9440142 -19564514 + AT_rich Low_complexity Low_complexity 1 21 0 8 657 6575 27 34 0 chrUextra 9441580 9442355 -19562301 + R1_DM LINE R1 3829 4629 -727 8 657 3440 196 15 27 chrUextra 9442455 9443230 -19561426 - SAR_DM Satellite Satellite -550 765 1 8 657 7195 4 0 0 chrUextra 9443330 9444105 -19560551 + Gypsy6_I LTR Gypsy 3176 3950 -3062 8 657 6030 27 1 0 chrUextra 9444205 9444980 -19559676 - PROTOP_A DNA P -111 994 219 8 657 6718 5 0 1 chrUextra 9445080 9445855 -19558801 + SSU-rRNA_Dme rRNA rRNA 31 804 -1191 8 657 3111 184 8 14 chrUextra 9445955 9446730 -19557926 + SAR_DM Satellite Satellite 200 969 -503 8 657 6747 4 0 1 chrUextra 9446830 9447605 -19557051 - R2_DM LINE R2 -1291 2316 1543 8 657 416 113 0 0 chrUextra 9447707 9447778 -19556878 - ARS406_DM Unknown Unknown -282 71 1 8 657 3227 185 9 8 chrUextra 9447716 9448480 -19556176 + SAR_DM Satellite Satellite 224 988 -484 8 657 4924 88 3 3 chrUextra 9448586 9449355 -19555301 + MICROPIA_I LTR Gypsy 1618 2385 -1714 8 657 681 179 7 14 chrUextra 9449466 9449608 -19555048 + HETRP_DM Satellite Satellite 1529 1669 -203 8 657 24 53 0 0 chrUextra 9449615 9449653 -19555003 + AT_rich Low_complexity Low_complexity 1 38 0 8 657 625 200 7 14 chrUextra 9449741 9449883 -19554773 + HETRP_DM Satellite Satellite 1529 1669 -203 8 657 372 22 0 0 chrUextra 9450014 9450059 -19554597 + (GA)n Simple_repeat Simple_repeat 2 46 0 8 657 489 225 8 16 chrUextra 9450059 9450181 -19554475 + HETRP_DM Satellite Satellite 1549 1669 -203 8 657 2445 199 8 9 chrUextra 9450334 9450868 -19553788 - Gypsy5_I LTR Gypsy -2691 3818 3286 8 657 2073 12 0 8 chrUextra 9450856 9451105 -19553551 + MICROPIA_I LTR Gypsy 1435 1681 -2795 8 657 6738 3 0 1 chrUextra 9451205 9451980 -19552676 + LSU-rRNA_Dme rRNA rRNA 2727 3500 -400 8 657 34 72 0 0 chrUextra 9452250 9452319 -19552337 + AT_rich Low_complexity Low_complexity 1 69 0 8 657 4622 42 83 0 chrUextra 9452955 9453730 -19550926 - PROTOP DNA P -3727 753 19 8 657 4061 12 0 47 chrUextra 9453830 9454359 -19550297 - LSU-rRNA_Dme rRNA rRNA -3395 505 2 8 657 28 79 0 0 chrUextra 9454372 9454435 -19550221 + AT_rich Low_complexity Low_complexity 1 63 0 8 657 5342 57 16 12 chrUextra 9454705 9455480 -19549176 + R2_DM LINE R2 869 1710 -1818 8 657 28 48 0 0 chrUextra 9455605 9455647 -19549009 + AT_rich Low_complexity Low_complexity 1 42 0 8 657 2143 146 65 26 chrUextra 9455654 9456291 -19548365 + Stalker2_I LTR Gypsy 291 999 -5531 8 657 2772 182 88 37 chrUextra 9456455 9457230 -19547426 + TAHRE LINE telomeric 7087 7900 -2563 8 657 1033 46 0 0 chrUextra 9457331 9457461 -19547195 + BS3_DM LINE Jockey 601 730 -1060 8 657 689 34 0 0 chrUextra 9457473 9457562 -19547094 + BS3_DM LINE Jockey 1458 1546 -244 8 657 3521 84 2 4 chrUextra 9457561 9458076 -19546580 + DM297_I LTR Gypsy 2179 2692 -3475 8 657 2725 98 33 53 chrUextra 9458205 9458692 -19545964 - R1_DM LINE R1 -4306 1050 574 8 657 970 108 29 29 chrUextra 9458693 9458865 -19545791 - R1_DM LINE R1 -5184 172 1 8 657 616 64 0 31 chrUextra 9458883 9458980 -19545676 + Gypsy6A_LTR LTR Gypsy 71 164 -256 8 657 2266 155 26 32 chrUextra 9459080 9460714 -19543942 + DMSAT6 Satellite Satellite 1 1623 -51 8 657 6734 4 0 0 chrUextra 9460830 9461605 -19543051 + R2_DM LINE R2 611 1385 -2222 8 657 392 103 0 0 chrUextra 9461807 9461865 -19542791 + FB4_DM DNA Tc1 1018 1075 -3014 8 657 865 128 5 11 chrUextra 9461892 9462081 -19542575 - S_DM DNA Tc1 0 1736 1549 8 657 22 56 0 0 chrUextra 9462192 9462228 -19542428 + AT_rich Low_complexity Low_complexity 1 36 0 8 657 6177 1 0 32 chrUextra 9463455 9464228 -19540428 - LSU-rRNA_Dme rRNA rRNA -3037 863 116 8 657 598 54 64 11 chrUextra 9464330 9464424 -19540232 + DNAREP1_DM LINE Penelope 8 106 -488 8 657 30 45 0 0 chrUextra 9464573 9464617 -19540039 + AT_rich Low_complexity Low_complexity 1 44 0 8 657 3002 181 12 12 chrUextra 9465205 9465973 -19538683 - SAR_DM Satellite Satellite -693 767 1 8 657 282 29 0 0 chrUextra 9466080 9466115 -19538541 + DNAREP1_DM LINE Penelope 553 587 -7 8 657 909 160 32 0 chrUextra 9466114 9466301 -19538355 - I_DM LINE I -3912 2319 2127 8 657 530 205 0 39 chrUextra 9466359 9466486 -19538170 - STALKER4_I LTR Gypsy -2717 3813 3692 8 657 37 52 0 0 chrUextra 9466631 9466689 -19537967 + AT_rich Low_complexity Low_complexity 1 58 0 8 657 333 176 370 0 chrUextra 9466738 9466846 -19537810 + PROTOP_B DNA P 940 1087 -66 8 657 6050 25 9 3 chrUextra 9466980 9467730 -19536926 - LSU-rRNA_Dme rRNA rRNA 0 3900 3146 8 657 1134 150 213 6 chrUextra 9467832 9468161 -19536495 + TART_B1 LINE telomeric 1844 2240 -8414 8 657 3661 7 0 7 chrUextra 9468173 9468605 -19536051 + DMRT1A LINE R1 3 431 -4752 8 657 4954 16 0 0 chrUextra 9468705 9469286 -19535370 - Invader6_I LTR Gypsy -3518 581 1 8 657 1615 21 0 0 chrUextra 9469286 9469480 -19535176 - Invader6_LTR LTR Gypsy 0 393 200 8 657 4979 60 45 20 chrUextra 9469607 9470355 -19534301 + MAX_I LTR Pao 1219 1985 -5929 8 657 2895 49 127 13 chrUextra 9470456 9471230 -19533426 + TART LINE telomeric 6794 7655 -6822 8 657 3155 70 72 2 chrUextra 9471337 9471945 -19532711 + PROTOP_A DNA P 570 1105 0 8 657 3308 164 20 12 chrUextra 9472215 9472960 -19531696 - SAR_DM Satellite Satellite -396 1076 326 8 657 3346 160 31 19 chrUextra 9473080 9473852 -19530804 - SAR_DM Satellite Satellite -425 1047 267 8 657 2499 78 30 20 chrUextra 9473960 9474724 -19529932 - DMSAT6 Satellite Satellite -69 772 1 8 657 717 18 36 27 chrUextra 9474826 9474938 -19529718 + NTS_DM Other Other 128 240 0 8 657 1847 4 17 13 chrUextra 9474938 9475177 -19529479 + NTS_DM Other Other 1 240 0 8 657 1711 17 17 21 chrUextra 9475177 9475418 -19529238 + NTS_DM Other Other 1 240 0 8 657 1352 28 6 6 chrUextra 9475418 9475600 -19529056 + NTS_DM Other Other 1 182 -58 8 657 21 36 0 0 chrUextra 9475721 9475749 -19528907 + AT_rich Low_complexity Low_complexity 1 28 0 8 657 850 18 0 27 chrUextra 9475775 9475887 -19528769 + NTS_DM Other Other 25 133 -107 8 657 1438 15 20 20 chrUextra 9475887 9476090 -19528566 + NTS_DM Other Other 38 240 0 8 657 1731 21 17 17 chrUextra 9476090 9476330 -19528326 + NTS_DM Other Other 1 240 0 8 657 1161 21 0 0 chrUextra 9476330 9476474 -19528182 + NTS_DM Other Other 1 144 -96 8 657 3450 173 9 10 chrUextra 9476574 9477345 -19527311 - SAR_DM Satellite Satellite -455 1017 248 8 657 2181 226 35 53 chrUextra 9477448 9478218 -19526438 - TAHRE LINE telomeric -2673 7790 7035 8 657 3113 0 0 3 chrUextra 9478322 9478681 -19525975 + LSU-rRNA_Dme rRNA rRNA 2296 2653 -1247 8 657 241 30 30 0 chrUextra 9478676 9478709 -19525947 + LSU-rRNA_Dme rRNA rRNA 2599 2632 -1268 8 657 3260 8 5 0 chrUextra 9478709 9479096 -19525560 + R1_DM LINE R1 1 389 -4967 8 657 5958 35 0 0 chrUextra 9479196 9479938 -19524718 - FW_DM LINE Jockey -3948 744 3 8 657 5996 31 5 7 chrUextra 9480072 9480841 -19523815 + DMRT1B LINE R1 4350 5117 -66 8 657 6366 21 0 4 chrUextra 9480944 9481718 -19522938 + R2_DM LINE R2 107 877 -2730 8 657 452 133 100 0 chrUextra 9483046 9483136 -19521520 + DNAREP1_DM LINE Penelope 496 594 0 8 657 33 25 0 0 chrUextra 9483189 9483229 -19521427 + AT_rich Low_complexity Low_complexity 1 40 0 8 657 735 52 0 10 chrUextra 9483566 9483664 -19520992 + Gypsy12_I LTR Gypsy 4563 4659 -887 8 657 2116 86 0 3 chrUextra 9483662 9483954 -19520702 + Gypsy12_I LTR Gypsy 5256 5546 0 8 657 984 154 15 30 chrUextra 9483953 9484154 -19520502 + Gypsy12_LTR LTR Gypsy 1 198 -2138 8 657 1531 16 0 11 chrUextra 9484154 9484340 -19520316 + PROTOP DNA P 1 183 -4297 8 657 628 71 0 0 chrUextra 9484444 9484527 -19520129 + ACCORD2_I LTR Gypsy 7122 7204 -8 8 657 1736 19 0 18 chrUextra 9484527 9484745 -19519911 + ACCORD2_LTR LTR Gypsy 1 214 -1 8 657 3645 34 21 0 chrUextra 9484746 9485214 -19519442 + R1_DM LINE R1 2422 2899 -2457 8 657 21 0 0 0 chrUextra 9485334 9485355 -19519301 + AT_rich Low_complexity Low_complexity 1 21 0 8 657 6414 14 22 0 chrUextra 9486188 9486962 -19517694 + FW_DM LINE Jockey 3553 4343 -349 8 657 296 71 0 0 chrUextra 9487062 9487104 -19517552 - Invader2_I LTR Gypsy -690 3902 3861 8 657 1380 101 31 8 chrUextra 9487118 9487420 -19517236 - Invader2_I LTR Gypsy -799 3793 3419 8 657 2308 39 23 0 chrUextra 9487420 9487729 -19516927 + IDEFIX_LTR LTR Gypsy 1 316 -278 8 657 21 0 0 0 chrUextra 9487729 9487750 -19516906 + AT_rich Low_complexity Low_complexity 1 21 0 8 657 683 36 0 0 chrUextra 9487752 9487836 -19516820 - CIRCE LINE Composite -1027 5329 5246 8 657 3096 178 17 21 chrUextra 9487952 9488710 -19515946 - SAR_DM Satellite Satellite -300 1172 418 8 657 441 0 58 43 chrUextra 9488810 9488879 -19515777 + NTS_DM Other Other 171 240 0 8 657 1704 21 17 21 chrUextra 9488879 9489120 -19515536 + NTS_DM Other Other 1 240 0 8 657 1850 4 17 13 chrUextra 9489120 9489359 -19515297 + NTS_DM Other Other 1 240 0 8 657 1760 0 13 13 chrUextra 9489359 9489583 -19515073 + NTS_DM Other Other 1 224 -16 8 657 6689 3 1 0 chrUextra 9489687 9490458 -19514198 + BATUMI_I LTR Pao 4852 5623 -2340 8 657 845 36 0 0 chrUextra 9490558 9490670 -19513986 + FW_DM LINE Jockey 3132 3243 -1449 8 657 3074 63 1 16 chrUextra 9490670 9491110 -19513546 - STALKER4_LTR LTR Gypsy -10 392 1 8 657 1632 14 5 5 chrUextra 9491110 9491332 -19513324 - STALKER4_I LTR Gypsy 0 6530 6309 8 657 640 193 7 14 chrUextra 9491485 9491627 -19513029 - HETRP_DM Satellite Satellite -203 1669 1529 8 657 414 258 8 8 chrUextra 9491762 9491883 -19512773 - HETRP_DM Satellite Satellite -203 1669 1549 8 657 192 40 0 0 chrUextra 9491883 9491908 -19512748 + (TC)n Simple_repeat Simple_repeat 2 26 0 8 657 608 200 7 14 chrUextra 9492039 9492181 -19512475 - HETRP_DM Satellite Satellite -203 1669 1529 8 657 21 89 0 0 chrUextra 9492323 9492379 -19512277 + AT_rich Low_complexity Low_complexity 1 56 0 8 657 6350 10 0 0 chrUextra 9493180 9493954 -19510702 + TART LINE telomeric 8518 9291 -5186 8 657 272 69 34 17 chrUextra 9494964 9495023 -19509633 + DNAREP1_DM LINE Penelope 228 287 -307 8 657 1276 111 17 54 chrUextra 9495045 9495284 -19509372 + DNAREP1_DM LINE Penelope 360 589 -5 8 657 930 107 13 0 chrUextra 9495531 9495680 -19508976 - DMCR1A LINE CR1 -1073 3397 3247 8 657 6704 0 0 0 chrUextra 9495802 9496576 -19508080 + R2_DM LINE R2 286 1059 -2548 8 657 3429 37 0 2 chrUextra 9496750 9497179 -19507477 - ROO_LTR LTR Pao 0 428 1 8 657 26 50 0 0 chrUextra 9497214 9497254 -19507402 + AT_rich Low_complexity Low_complexity 1 40 0 8 657 6063 30 3 17 chrUextra 9497550 9498324 -19506332 + CIRCE LINE Composite 2400 3162 -3194 8 657 6130 19 3 1 chrUextra 9498424 9499198 -19505458 + PROTOP DNA P 3628 4402 -78 8 657 1037 8 8 0 chrUextra 9499301 9499425 -19505231 - DM1731_I LTR Copia -526 3450 3326 8 657 882 9 9 0 chrUextra 9499429 9499536 -19505120 - DM1731_I LTR Copia -3868 108 1 8 657 2239 36 103 0 chrUextra 9499536 9499837 -19504819 - DM1731_LTR LTR Copia 0 336 5 8 657 1413 12 0 0 chrUextra 9499837 9500000 -19504656 + (TATAA)n Simple_repeat Simple_repeat 4 166 0 8 657 606 14 0 0 chrUextra 9500000 9500071 -19504585 + (TATAA)n Simple_repeat Simple_repeat 2 72 0 8 657 3328 190 23 26 chrUextra 9500172 9500945 -19503711 - HETA LINE telomeric -1819 4262 3492 8 657 3982 5 0 0 chrUextra 9501262 9501690 -19502966 - ROO_LTR LTR Pao 0 428 1 8 657 1158 8 0 0 chrUextra 9501690 9501820 -19502836 - ROO_I LTR Pao 0 8256 8127 8 657 1618 45 70 14 chrUextra 9501920 9502262 -19502394 - ZAM_I LTR Gypsy -1347 6143 5722 8 657 3513 16 188 0 chrUextra 9502262 9502694 -19501962 + PROTOP_B DNA P 1 513 -640 8 657 3663 0 0 0 chrUextra 9502794 9503189 -19501467 + NOMAD_LTR LTR Gypsy 124 518 0 8 657 551 0 125 11 chrUextra 9503189 9503565 -19501091 + (TA)n Simple_repeat Simple_repeat 1 419 0 8 657 2155 51 64 3 chrUextra 9503669 9503964 -19500692 - G2_DM LINE Jockey -333 2769 2457 8 657 3823 56 23 0 chrUextra 9503963 9504442 -19500214 - G2_DM LINE Jockey -1090 2012 1523 8 657 2805 178 9 8 chrUextra 9504545 9505316 -19499340 - SAR_DM Satellite Satellite -675 772 1 8 657 273 57 0 0 chrUextra 9506155 9506190 -19498466 + (GAGAA)n Simple_repeat Simple_repeat 1 35 0 8 657 6431 40 16 0 chrUextra 9506290 9507064 -19497592 - R1_DM LINE R1 -3376 1980 1195 8 657 6709 23 0 5 chrUextra 9507164 9507938 -19496718 + R1_DM LINE R1 4045 4814 -542 8 657 3388 192 10 13 chrUextra 9508040 9508806 -19495850 - SAR_DM Satellite Satellite -514 958 195 8 657 1557 44 98 5 chrUextra 9508912 9509038 -19495618 - DMRT1B LINE R1 -4895 288 163 8 657 180 0 0 0 chrUextra 9509038 9509058 -19495598 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 8 657 1557 44 98 5 chrUextra 9509058 9509136 -19495520 - DMRT1B LINE R1 -5021 162 66 8 657 1207 126 6 0 chrUextra 9509134 9509316 -19495340 - DMRT1C LINE R1 -4786 657 475 8 657 3416 184 25 12 chrUextra 9509786 9510559 -19494097 + SAR_DM Satellite Satellite 195 977 -495 8 657 521 0 17 0 chrUextra 9510660 9510719 -19493937 + LSU-rRNA_Dme rRNA rRNA 3837 3896 -4 8 657 268 196 0 19 chrUextra 9510827 9510879 -19493777 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 657 268 196 0 19 chrUextra 9510919 9510971 -19493685 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 657 268 196 0 19 chrUextra 9511011 9511063 -19493593 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 657 278 176 0 19 chrUextra 9511094 9511146 -19493510 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 657 22 56 0 0 chrUextra 9511159 9511195 -19493461 + AT_rich Low_complexity Low_complexity 1 36 0 8 657 906 9 0 35 chrUextra 9511221 9511334 -19493322 + NTS_DM Other Other 25 133 -107 8 657 881 10 0 0 chrUextra 9511334 9511434 -19493222 + NTS_DM Other Other 38 137 -103 8 657 6949 4 1 1 chrUextra 9511537 9512308 -19492348 + DOC LINE Jockey 1043 1813 -2912 8 657 7153 5 0 1 chrUextra 9512408 9513182 -19491474 + DM1731_I LTR Copia 1036 1808 -2168 8 657 1694 20 0 5 chrUextra 9513282 9513482 -19491174 - Copia_I LTR Copia -4394 199 1 8 657 2449 4 0 0 chrUextra 9513482 9513758 -19490898 - Copia_LTR LTR Copia 0 276 1 8 657 2488 0 0 0 chrUextra 9513758 9514056 -19490600 + MDG3_I LTR Gypsy 4639 4936 -50 8 657 1140 21 107 0 chrUextra 9514591 9514731 -19489925 + PROTOP_A DNA P 1 155 -950 8 657 1568 87 0 5 chrUextra 9514722 9514930 -19489726 + Gypsy12_I LTR Gypsy 4651 4857 -689 8 657 6775 10 0 3 chrUextra 9515030 9515804 -19488852 + STALKER4_I LTR Gypsy 5502 6273 -257 8 657 6714 22 4 0 chrUextra 9515904 9516678 -19487978 + DMRT1A LINE R1 1357 2133 -3050 8 657 2548 86 4 39 chrUextra 9516778 9517531 -19487125 + DMSAT6 Satellite Satellite 1 727 -183 8 657 27 29 0 0 chrUextra 9517785 9517819 -19486837 + AT_rich Low_complexity Low_complexity 1 34 0 8 657 265 91 0 0 chrUextra 9518058 9518091 -19486565 + Baggins1 LINE LOA 4727 4759 -694 8 657 769 103 241 0 chrUextra 9518096 9518241 -19486415 + FB4_DM DNA Tc1 3908 4087 -2 8 657 1206 57 0 0 chrUextra 9518526 9518685 -19485971 + (CAATA)n Simple_repeat Simple_repeat 3 161 0 8 657 251 0 0 0 chrUextra 9518685 9518719 -19485937 - Copia_LTR LTR Copia 0 276 243 8 657 2456 4 0 0 chrUextra 9518719 9518995 -19485661 - Copia_LTR LTR Copia 0 276 1 8 657 2835 0 0 0 chrUextra 9518995 9519300 -19485356 - Copia_I LTR Copia 0 4593 4289 8 657 3299 191 18 27 chrUextra 9519400 9520174 -19484482 - SAR_DM Satellite Satellite -268 1204 438 8 657 2395 98 13 62 chrUextra 9520274 9521048 -19483608 + DMSAT6 Satellite Satellite 1 735 -74 8 657 3361 30 50 1 chrUextra 9521148 9521893 -19482763 + DOC3_DM LINE Jockey 3243 4023 -717 8 657 7066 9 4 0 chrUextra 9522022 9522796 -19481860 - Copia2_I LTR Copia -699 3463 2687 8 657 3149 202 15 27 chrUextra 9522896 9523664 -19480992 + SAR_DM Satellite Satellite 1 759 -216 8 657 3174 17 0 0 chrUextra 9523771 9524127 -19480529 - MDG1_LTR LTR Gypsy 0 442 87 8 657 423 100 0 0 chrUextra 9524127 9524197 -19480459 + (TTA)n Simple_repeat Simple_repeat 3 72 0 8 657 1953 6 414 0 chrUextra 9524213 9524544 -19480112 - MDG1_I LTR Gypsy 0 6596 6129 8 657 6862 16 17 0 chrUextra 9524644 9525418 -19479238 + IVK_DM LINE I 16 802 -4600 8 657 7085 4 0 0 chrUextra 9525518 9526292 -19478364 + G2_DM LINE Jockey 324 1097 -2005 8 657 2649 10 0 0 chrUextra 9526392 9526681 -19477975 + G_DM LINE Jockey 928 1216 -3130 8 657 4326 8 4 0 chrUextra 9526680 9527166 -19477490 + G_DM LINE Jockey 1342 1829 -2517 8 657 7005 0 1 1 chrUextra 9527288 9528040 -19476616 - LSU-rRNA_Dme rRNA rRNA 0 3900 3149 8 657 6661 26 1 0 chrUextra 9528140 9528914 -19475742 - R1_DM LINE R1 -2126 3230 2456 8 657 6258 57 1 7 chrUextra 9529014 9529788 -19474868 - BATUMI_I LTR Pao -3683 4280 3511 8 657 359 0 0 0 chrUextra 9529888 9529928 -19474728 - LSU-rRNA_Dme rRNA rRNA -3860 40 1 8 657 21 95 0 0 chrUextra 9529940 9530003 -19474653 + AT_rich Low_complexity Low_complexity 1 63 0 8 657 34 24 0 0 chrUextra 9530218 9530259 -19474397 + AT_rich Low_complexity Low_complexity 1 41 0 8 657 3546 174 11 19 chrUextra 9530762 9531512 -19473144 + SAR_DM Satellite Satellite 375 1118 -354 8 657 422 186 10 19 chrUextra 9531426 9531530 -19473126 - XDMR_DM Unknown Unknown 0 360 258 8 657 3566 24 108 0 chrUextra 9531636 9532410 -19472246 - ROO_I LTR Pao -1447 6809 5952 8 657 3114 46 94 0 chrUextra 9532511 9533283 -19471373 - IDEFIX_I LTR Gypsy -3209 2419 1576 8 657 1229 37 0 6 chrUextra 9533922 9534086 -19470570 + (TTCTC)n Simple_repeat Simple_repeat 2 164 0 8 657 495 0 0 0 chrUextra 9534096 9534151 -19470505 + (GAGAA)n Simple_repeat Simple_repeat 5 59 0 8 657 2635 88 39 13 chrUextra 9534256 9535029 -19469627 - DMSAT6 Satellite Satellite -41 793 1 8 657 3323 196 13 21 chrUextra 9535129 9535902 -19468754 + SAR_DM Satellite Satellite 445 1211 -261 8 657 455 159 159 0 chrUextra 9536004 9536111 -19468545 - Stalker2_I LTR Gypsy -7037 365 242 8 657 309 96 0 37 chrUextra 9536285 9536339 -19468317 - Stalker2_I LTR Gypsy -7350 52 1 8 657 3734 32 0 0 chrUextra 9536342 9536775 -19467881 + R1_DM LINE R1 1567 1999 -3357 8 657 7097 1 3 3 chrUextra 9536875 9537648 -19467008 - SSU-rRNA_Dme rRNA rRNA -215 1780 1008 8 657 6833 14 0 0 chrUextra 9537748 9538521 -19466135 + R1_DM LINE R1 2368 3140 -2216 8 657 3614 176 11 9 chrUextra 9538632 9539382 -19465274 - SAR_DM Satellite Satellite -396 1076 326 8 657 2025 4 8 0 chrUextra 9539494 9539728 -19464928 - FW_DM LINE Jockey -1845 2847 2612 8 657 4885 6 6 0 chrUextra 9539728 9540267 -19464389 - FW_DM LINE Jockey -2497 2195 1654 8 657 593 297 31 27 chrUextra 9542453 9542747 -19461909 - SAR_DM Satellite Satellite -601 871 577 8 657 334 317 24 18 chrUextra 9542608 9542772 -19461884 + XDMR Unknown Unknown 1 165 -196 8 657 6753 13 21 0 chrUextra 9542989 9543759 -19460897 + DOC2_DM LINE Jockey 2403 3188 -1605 8 657 6422 47 1 1 chrUextra 9543859 9544632 -19460024 - R1_DM LINE R1 -3786 1570 798 8 657 692 196 14 14 chrUextra 9544749 9544894 -19459762 + DMLTR5 LTR Gypsy 122 266 0 8 657 376 49 65 16 chrUextra 9544893 9544955 -19459701 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 8 657 298 277 99 73 chrUextra 9545000 9545191 -19459465 - Invader1_LTR LTR Gypsy -144 279 84 8 657 444 155 200 19 chrUextra 9545400 9545505 -19459151 + DMLTR5 LTR Gypsy 44 167 -99 8 657 1618 29 5 67 chrUextra 9545605 9545829 -19458827 + ALUII_DM Unknown Unknown 31 240 0 8 657 4743 57 2 43 chrUextra 9547495 9548124 -19456532 - CIRCE LINE Composite -5386 970 368 8 657 7016 0 1 1 chrUextra 9548224 9548997 -19455659 + DOC LINE Jockey 433 1205 -3520 8 657 2899 45 8 0 chrUextra 9549097 9549452 -19455204 - PROTOP_A DNA P -674 431 74 8 657 1929 13 17 17 chrUextra 9549998 9550238 -19454418 + NTS_DM Other Other 1 240 0 8 657 2006 0 17 13 chrUextra 9550238 9550477 -19454179 + NTS_DM Other Other 1 240 0 8 657 1976 0 17 17 chrUextra 9550477 9550717 -19453939 + NTS_DM Other Other 1 240 0 8 657 242 0 0 0 chrUextra 9550717 9550743 -19453913 + NTS_DM Other Other 1 26 -214 8 657 1431 28 0 0 chrUextra 9550843 9551019 -19453637 + (GAGAA)n Simple_repeat Simple_repeat 2 177 0 8 657 3232 201 37 5 chrUextra 9551727 9552488 -19452168 - SAR_DM Satellite Satellite -416 1056 272 8 657 6827 10 3 0 chrUextra 9552589 9553362 -19451294 - PROTOP_A DNA P -37 1068 294 8 657 1978 208 53 30 chrUextra 9553465 9553956 -19450700 - Gypsy12_LTR LTR Gypsy -1834 502 1 8 657 1596 95 201 3 chrUextra 9553956 9554235 -19450421 - Gypsy12_I LTR Gypsy 0 5546 5213 8 657 5562 81 5 10 chrUextra 9554335 9555108 -19449548 + IDEFIX_I LTR Gypsy 56 824 -4804 8 657 5093 94 60 0 chrUextra 9555208 9555981 -19448675 - TART_B1 LINE telomeric -7719 2935 2117 8 657 4879 90 71 38 chrUextra 9556081 9556854 -19447802 - Gypsy12_I LTR Gypsy -4321 1225 427 8 657 2299 15 7 11 chrUextra 9556959 9557235 -19447421 + BLASTOPIA_LTR LTR Gypsy 1 275 0 8 657 1182 21 28 0 chrUextra 9557235 9557360 -19447296 - NTS_DM Other Other -111 129 1 8 657 2006 0 17 13 chrUextra 9557360 9557599 -19447057 - NTS_DM Other Other 0 240 1 8 657 936 0 31 24 chrUextra 9557599 9557726 -19446930 - NTS_DM Other Other 0 240 113 8 657 3554 181 14 17 chrUextra 9557828 9558597 -19446059 + SAR_DM Satellite Satellite 278 1044 -428 8 657 6683 21 1 8 chrUextra 9558700 9559473 -19445183 - Gypsy6_I LTR Gypsy -4768 2244 1477 8 657 5290 5 0 0 chrUextra 9559573 9560150 -19444506 + ROO_I LTR Pao 4072 4648 -3608 8 657 1911 0 0 0 chrUextra 9560136 9560346 -19444310 + ROO_I LTR Pao 6285 6494 -1762 8 657 3260 182 36 27 chrUextra 9560446 9561219 -19443437 - SAR_DM Satellite Satellite -293 1179 400 8 657 6396 49 0 1 chrUextra 9561319 9562079 -19442577 + BS2 LINE Jockey 3285 4043 -678 8 657 2382 169 49 17 chrUextra 9562343 9562965 -19441691 + TART LINE telomeric 8952 9434 -5043 8 657 5962 18 0 1 chrUextra 9563089 9563769 -19440887 + PROTOP DNA P 3802 4480 0 8 657 552 16 0 0 chrUextra 9563769 9563831 -19440825 - DMRT1A LINE R1 -3076 2107 2046 8 657 6002 10 1 3 chrUextra 9564007 9564711 -19439945 - ROVER-I_DM LTR Gypsy -1253 5331 4629 8 657 3980 5 0 0 chrUextra 9565684 9566116 -19438540 - DOC2_DM LINE Jockey -819 3974 3543 8 657 3121 11 6 0 chrUextra 9566104 9566457 -19438199 - DOC2_DM LINE Jockey -2054 2739 2385 8 657 263 272 73 85 chrUextra 9567150 9567327 -19437329 - Invader1_LTR LTR Gypsy -55 368 194 8 657 7203 0 0 0 chrUextra 9567430 9568203 -19436453 - BARI_DM DNA Tc1 -774 954 182 8 658 1074 16 0 16 chrUextra 9568303 9568431 -19436225 - CIRCE LINE Composite -2715 3641 3516 8 658 448 125 14 0 chrUextra 9568523 9568595 -19436061 - Gypsy8_LTR LTR Gypsy -231 73 1 8 658 1097 85 6 41 chrUextra 9568597 9568768 -19435888 - Invader2_I LTR Gypsy -567 4025 3861 8 658 1500 96 26 23 chrUextra 9568782 9569072 -19435584 - Invader2_I LTR Gypsy -799 3793 3434 8 658 925 17 0 78 chrUextra 9569176 9569305 -19435351 - DM176_LTR LTR Gypsy -388 119 1 8 658 277 161 51 0 chrUextra 9569305 9569413 -19435243 + MDG1_I LTR Gypsy 773 886 -5710 8 658 4048 46 44 0 chrUextra 9569427 9569949 -19434707 + MDG1_I LTR Gypsy 1193 1737 -4859 8 658 6857 9 3 9 chrUextra 9570049 9570822 -19433834 + LSU-rRNA_Dme rRNA rRNA 2189 2956 -944 8 658 2605 104 19 8 chrUextra 9570922 9571695 -19432961 + DMSAT6 Satellite Satellite 1 781 0 8 658 3583 186 14 8 chrUextra 9572668 9573438 -19431218 - SAR_DM Satellite Satellite -397 1075 301 8 658 2963 49 0 0 chrUextra 9573542 9573912 -19430744 + MAX_I LTR Pao 7545 7914 0 8 658 1513 123 163 0 chrUextra 9573915 9574191 -19430465 + MAX_LTR LTR Pao 1 321 0 8 658 529 219 8 0 chrUextra 9574191 9574314 -19430342 + SAR_DM Satellite Satellite 626 749 -723 8 658 5983 0 0 0 chrUextra 9574414 9575068 -19429588 + G_DM LINE Jockey 3690 4343 -3 8 658 232 179 0 0 chrUextra 9575148 9575187 -19429469 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2582 8 658 3790 5 0 0 chrUextra 9575505 9575922 -19428734 + TIRANT_LTR LTR Gypsy 1 417 0 8 658 1158 14 14 0 chrUextra 9575922 9576060 -19428596 + TIRANT_I LTR Gypsy 1 140 -7552 8 658 7219 1 5 0 chrUextra 9576160 9576933 -19427723 + Gypsy6_I LTR Gypsy 4813 5589 -1423 8 658 6460 9 107 7 chrUextra 9577033 9577806 -19426850 - DOC2_DM LINE Jockey -3 4790 3940 8 658 2515 109 14 16 chrUextra 9577906 9578679 -19425977 + DMSAT6 Satellite Satellite 1 771 0 8 658 1087 172 30 22 chrUextra 9578779 9579010 -19425646 + DM412B_LTR LTR Gypsy 208 440 -131 8 658 3445 43 0 19 chrUextra 9579050 9579481 -19425175 + G5A_DM LINE Jockey 2419 2841 0 8 658 275 83 0 0 chrUextra 9579514 9579550 -19425106 - BS2 LINE Jockey -4260 461 426 8 658 2934 130 41 39 chrUextra 9579652 9580237 -19424419 + PROTOP_A DNA P 520 1105 0 8 658 7176 0 1 0 chrUextra 9580525 9581298 -19423358 + STALKER4_I LTR Gypsy 3864 4637 -1893 8 658 1836 37 180 0 chrUextra 9581629 9581873 -19422783 + PROTOP_A DNA P 1 288 -817 8 658 1234 53 91 0 chrUextra 9581877 9582171 -19422485 + PROTOP_B DNA P 532 754 -399 8 658 6895 5 8 1 chrUextra 9582271 9583044 -19421612 - Gypsy3_I LTR Gypsy -4161 2016 1239 8 658 6583 30 5 0 chrUextra 9583144 9583917 -19420739 - R1_DM LINE R1 -2457 2899 2123 8 658 2781 0 3 0 chrUextra 9584017 9584317 -19420339 - NOMAD_I LTR Gypsy -2215 4357 4057 8 658 4458 2 0 2 chrUextra 9584308 9584790 -19419866 - NOMAD_I LTR Gypsy -5132 1440 960 8 658 6529 25 1 0 chrUextra 9584890 9585643 -19419013 + R1_DM LINE R1 4313 5066 -290 8 658 6811 19 0 0 chrUextra 9585763 9586536 -19418120 - R1_DM LINE R1 -698 4658 3886 8 658 1350 18 0 6 chrUextra 9586662 9586827 -19417829 + NTS_DM Other Other 38 201 -39 8 658 936 9 0 27 chrUextra 9586879 9586991 -19417665 + NTS_DM Other Other 25 133 -107 8 658 1350 18 0 6 chrUextra 9586991 9587156 -19417500 + NTS_DM Other Other 38 201 -39 8 658 1415 23 0 22 chrUextra 9587208 9587389 -19417267 + NTS_DM Other Other 25 201 -39 8 658 4252 94 20 28 chrUextra 9588382 9589150 -19415506 + HETA LINE telomeric 1 677 -5404 8 658 396 0 0 0 chrUextra 9589331 9589376 -19415280 + Copia2_LTR_DM LTR Copia 154 198 0 8 658 5889 11 0 1 chrUextra 9589376 9590028 -19414628 + Copia2_I LTR Copia 1 651 -3511 8 658 6637 27 1 1 chrUextra 9591001 9591774 -19412882 + R1_DM LINE R1 2517 3289 -2067 8 658 788 33 339 0 chrUextra 9591874 9591995 -19412661 - R1_DM LINE R1 -1848 3508 3347 8 658 5563 35 8 0 chrUextra 9591991 9592647 -19412009 - R1_DM LINE R1 -2696 2660 2000 8 658 5552 17 21 0 chrUextra 9592747 9593378 -19411278 - IVK_DM LINE I -4758 644 1 8 658 508 221 0 14 chrUextra 9593378 9593520 -19411136 + TABOR_I LTR Gypsy 3157 3296 -3040 8 658 3429 182 17 23 chrUextra 9593624 9594393 -19410263 - SAR_DM Satellite Satellite -300 1172 409 8 658 3465 187 17 23 chrUextra 9594493 9595258 -19409398 + SAR_DM Satellite Satellite 1 760 -217 8 658 6237 42 35 1 chrUextra 9595365 9596136 -19408520 + R1_DM LINE R1 895 1691 -3665 8 658 209 174 114 19 chrUextra 9596668 9596826 -19407830 + (TCTA)n Simple_repeat Simple_repeat 4 176 0 8 658 3827 168 9 8 chrUextra 9597125 9597876 -19406780 + SAR_DM Satellite Satellite 325 1076 -396 8 658 740 216 6 19 chrUextra 9598119 9598275 -19406381 + HETRP_DM Satellite Satellite 1529 1682 -190 8 658 751 203 6 19 chrUextra 9598436 9598592 -19406064 + HETRP_DM Satellite Satellite 1529 1682 -190 8 658 3233 194 15 19 chrUextra 9598853 9599625 -19405031 - SAR_DM Satellite Satellite -593 768 1 8 658 2708 53 0 3 chrUextra 9599725 9600082 -19404574 - BATUMI_I LTR Pao -305 7658 7303 8 658 3116 34 8 10 chrUextra 9600105 9600494 -19404162 + BATUMI_I LTR Pao 6427 6814 -1149 8 658 7028 9 4 0 chrUextra 9600597 9601369 -19403287 + Copia2_I LTR Copia 2580 3354 -808 8 658 7009 5 1 0 chrUextra 9601470 9602241 -19402415 + R1_DM LINE R1 4034 4805 -551 8 658 5517 37 41 1 chrUextra 9602341 9603113 -19401543 + R1_DM LINE R1 2245 3085 -2271 8 658 3746 179 10 9 chrUextra 9603213 9603983 -19400673 + SAR_DM Satellite Satellite 267 1037 -435 8 658 1425 271 93 63 chrUextra 9604107 9604831 -19399825 - Gypsy12_LTR LTR Gypsy -1187 1149 404 8 658 6594 25 7 0 chrUextra 9604957 9605729 -19398927 - R1_DM LINE R1 -2172 3184 2408 8 658 646 13 0 0 chrUextra 9605829 9605906 -19398750 + NTS_DM Other Other 57 133 -107 8 658 1350 18 0 6 chrUextra 9605906 9606071 -19398585 + NTS_DM Other Other 38 201 -39 8 658 936 9 0 27 chrUextra 9606123 9606235 -19398421 + NTS_DM Other Other 25 133 -107 8 658 1350 18 0 6 chrUextra 9606235 9606400 -19398256 + NTS_DM Other Other 38 201 -39 8 658 936 9 0 27 chrUextra 9606452 9606564 -19398092 + NTS_DM Other Other 25 133 -107 8 658 318 0 27 0 chrUextra 9606564 9606601 -19398055 + NTS_DM Other Other 38 75 -165 8 658 3336 184 17 30 chrUextra 9606701 9607473 -19397183 - SAR_DM Satellite Satellite -255 1217 456 8 658 3207 207 16 21 chrUextra 9607573 9608345 -19396311 + SAR_DM Satellite Satellite 1 767 -224 8 658 4726 40 45 5 chrUextra 9608445 9609027 -19395629 - DMCR1A LINE CR1 -2784 1686 1082 8 658 233 289 57 36 chrUextra 9608993 9609133 -19395523 - Gypsy5_I LTR Gypsy -2421 4088 3946 8 658 5865 56 19 3 chrUextra 9609317 9610089 -19394567 + R1_DM LINE R1 172 956 -4400 8 658 1254 40 0 7 chrUextra 9610189 9610342 -19394314 - NTS_DM Other Other -88 152 1 8 658 1516 25 20 20 chrUextra 9610342 9610545 -19394111 - NTS_DM Other Other 0 240 38 8 658 917 18 0 27 chrUextra 9610545 9610657 -19393999 - NTS_DM Other Other -107 133 25 8 658 1350 18 0 6 chrUextra 9610709 9610874 -19393782 - NTS_DM Other Other -39 201 38 8 658 731 12 0 0 chrUextra 9610874 9610958 -19393698 - NTS_DM Other Other -107 133 50 8 658 3784 176 16 9 chrUextra 9611061 9611833 -19392823 + SAR_DM Satellite Satellite 252 1028 -444 8 658 6285 9 0 4 chrUextra 9611933 9612705 -19391951 + Invader2_I LTR Gypsy 3437 4205 -387 8 658 1394 0 0 12 chrUextra 9612805 9612972 -19391684 + R1_DM LINE R1 5192 5356 0 8 658 5247 2 2 2 chrUextra 9612970 9613577 -19391079 + LSU-rRNA_Dme rRNA rRNA 2640 3246 -654 8 658 6337 8 0 4 chrUextra 9613677 9614449 -19390207 - HETA LINE telomeric -356 5725 4957 8 658 6546 5 1 5 chrUextra 9614557 9615321 -19389335 + MICROPIA_I LTR Gypsy 2976 3736 -740 8 658 4530 24 7 45 chrUextra 9615421 9616022 -19388634 - CIRCE LINE Composite -5778 578 1 8 658 1426 23 0 0 chrUextra 9616022 9616193 -19388463 - CIRCE LINE Composite 0 6356 6186 8 658 1608 10 0 60 chrUextra 9616293 9616510 -19388146 - ROO_I LTR Pao -8052 204 1 8 658 3766 0 0 0 chrUextra 9616510 9616938 -19387718 - ROO_LTR LTR Pao 0 428 1 8 658 3343 177 7 10 chrUextra 9618037 9618806 -19385850 - SAR_DM Satellite Satellite -515 957 192 8 658 3922 39 0 0 chrUextra 9618909 9619400 -19385256 - CIRCE LINE Composite -5865 491 1 8 658 2170 43 0 4 chrUextra 9619404 9619681 -19384975 - CIRCE LINE Composite -4 6352 6077 8 658 301 87 0 0 chrUextra 9619781 9619827 -19384829 - ARS406_DM Unknown Unknown -307 46 1 8 658 3405 177 13 7 chrUextra 9619787 9620553 -19384103 + SAR_DM Satellite Satellite 246 1016 -456 8 658 6538 0 1 0 chrUextra 9620653 9621425 -19383231 + TABOR_I LTR Gypsy 1077 1849 -4487 8 658 479 122 100 0 chrUextra 9622134 9622224 -19382432 + DNAREP1_DM LINE Penelope 496 594 0 8 658 6682 1 0 0 chrUextra 9622397 9623169 -19381487 + R1_DM LINE R1 1445 2216 -3140 8 658 1262 54 0 0 chrUextra 9623269 9623437 -19381219 - FW_DM LINE Jockey -4524 168 1 8 658 4941 22 0 0 chrUextra 9623445 9624041 -19380615 + R1_DM LINE R1 1377 1972 -3384 8 658 1391 0 0 0 chrUextra 9624141 9624303 -19380353 - ROO_LTR LTR Pao -266 162 1 8 658 3036 0 31 0 chrUextra 9624303 9624686 -19379970 - ROO_I LTR Pao 0 8256 7862 8 658 1749 22 0 0 chrUextra 9624688 9624913 -19379743 - DOC LINE Jockey 0 4725 4501 8 658 25 0 0 0 chrUextra 9626021 9626046 -19378610 + AT_rich Low_complexity Low_complexity 1 25 0 8 658 2066 41 4 0 chrUextra 9626388 9626657 -19377999 + IDEFIX_I LTR Gypsy 1 270 -5358 8 658 6514 0 1 0 chrUextra 9626757 9627529 -19377127 - ROO_I LTR Pao -3036 5220 4448 8 658 3461 174 10 10 chrUextra 9627630 9628401 -19376255 + SAR_DM Satellite Satellite 246 1016 -456 8 658 702 0 0 12 chrUextra 9628501 9628587 -19376069 + LSU-rRNA_Dme rRNA rRNA 1704 1788 -2112 8 658 5555 2 0 2 chrUextra 9628632 9629273 -19375383 + LSU-rRNA_Dme rRNA rRNA 1788 2427 -1473 8 658 4312 2 0 0 chrUextra 9629373 9629869 -19374787 + LSU-rRNA_Dme rRNA rRNA 2086 2581 -1319 8 658 2422 4 0 0 chrUextra 9629867 9630145 -19374511 + R2_DM LINE R2 1540 1817 -1790 8 658 3199 179 11 9 chrUextra 9630250 9631000 -19373656 - SAR_DM Satellite Satellite -396 1076 326 8 658 6664 0 1 0 chrUextra 9631117 9631889 -19372767 - ROO_I LTR Pao -5305 2951 2179 8 658 4712 149 0 0 chrUextra 9631995 9632761 -19371895 + HMSBEAGLE_I LTR Gypsy 3191 3956 -2573 8 658 6279 31 0 0 chrUextra 9632861 9633633 -19371023 - R1_DM LINE R1 -2049 3307 2536 8 658 769 11 11 0 chrUextra 9633735 9633829 -19370827 - R1_DM LINE R1 -5261 95 1 8 658 5830 1 0 3 chrUextra 9633829 9634505 -19370151 - LSU-rRNA_Dme rRNA rRNA -1268 2632 1959 8 658 4232 85 40 25 chrUextra 9634605 9635377 -19369279 + STALKER4_I LTR Gypsy 761 1544 -4986 8 658 253 57 0 0 chrUextra 9635479 9635514 -19369142 + ARS406_DM Unknown Unknown 124 158 -195 8 658 644 63 53 0 chrUextra 9635511 9635606 -19369050 + ARS406_DM Unknown Unknown 90 189 -164 8 658 2995 180 17 10 chrUextra 9635521 9636228 -19368428 - SAR_DM Satellite Satellite -569 903 192 8 658 710 95 9 0 chrUextra 9636133 9636249 -19368407 + ARS406_DM Unknown Unknown 1 117 -236 8 658 3557 2 149 0 chrUextra 9636349 9636826 -19367830 + ACCORD_LTR LTR Gypsy 11 558 0 8 658 2440 10 3 0 chrUextra 9636826 9637121 -19367535 + ACCORD_I LTR Gypsy 1 296 -5992 8 658 1985 8 0 0 chrUextra 9637401 9637641 -19367015 - ALUII_DM Unknown Unknown 0 240 1 8 658 21 57 0 0 chrUextra 9637641 9637676 -19366980 + AT_rich Low_complexity Low_complexity 1 35 0 8 658 22 35 0 0 chrUextra 9637873 9637902 -19366754 + AT_rich Low_complexity Low_complexity 1 29 0 8 658 946 92 8 19 chrUextra 9638093 9638864 -19365792 + RSP Satellite Satellite 1 762 0 8 658 2225 239 42 35 chrUextra 9638965 9639707 -19364949 - ROVER-I_DM LTR Gypsy -4289 2295 1549 8 658 263 0 0 0 chrUextra 9639837 9639867 -19364789 - DM1731_LTR LTR Copia -306 30 1 8 658 6212 4 7 7 chrUextra 9639867 9640609 -19364047 - DM1731_I LTR Copia 0 3976 3235 8 658 6577 1 0 0 chrUextra 9640709 9641481 -19363175 - DM412 LTR Gypsy -1379 5518 4747 8 658 24 32 0 0 chrUextra 9641602 9641633 -19363023 + AT_rich Low_complexity Low_complexity 1 31 0 8 658 6495 14 0 0 chrUextra 9642456 9643225 -19361431 + R1_DM LINE R1 3905 4673 -683 8 658 2361 185 9 7 chrUextra 9643326 9643882 -19360774 + SAR_DM Satellite Satellite 267 823 -649 8 658 6577 1 1 0 chrUextra 9644197 9644969 -19359687 + ROO_I LTR Pao 1219 1991 -6265 8 658 6667 5 0 0 chrUextra 9645069 9645841 -19358815 + MAX_I LTR Pao 1631 2402 -5512 8 658 3327 176 10 10 chrUextra 9645943 9646713 -19357943 + SAR_DM Satellite Satellite 237 1006 -466 8 658 6593 4 0 1 chrUextra 9646813 9647585 -19357071 - DOC LINE Jockey -1318 3407 2637 8 658 6720 0 4 0 chrUextra 9647685 9648457 -19356199 + LSU-rRNA_Dme rRNA rRNA 3066 3840 -60 8 658 5994 14 16 10 chrUextra 9649429 9650201 -19354455 + QUASIMODO_I LTR Gypsy 1267 2042 -4018 8 658 3029 193 12 15 chrUextra 9650301 9651073 -19353583 - SAR_DM Satellite Satellite -593 769 1 8 658 2202 49 0 14 chrUextra 9651173 9651464 -19353192 - DMCR1A LINE CR1 -3914 556 270 8 658 2329 4 0 4 chrUextra 9652045 9652315 -19352341 - BEL_I LTR Pao -5135 269 1 8 658 3118 6 0 0 chrUextra 9652315 9652676 -19351980 - BEL_LTR LTR Pao 0 361 1 8 658 245 125 46 15 chrUextra 9653407 9653472 -19351184 + (TAA)n Simple_repeat Simple_repeat 2 68 0 8 658 2916 194 23 18 chrUextra 9653789 9654561 -19350095 - SAR_DM Satellite Satellite -259 1213 438 8 658 1557 17 0 0 chrUextra 9654670 9654850 -19349806 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 8 658 499 56 56 0 chrUextra 9655533 9655604 -19349052 + R1_DM LINE R1 716 790 -4566 8 658 5316 57 1 4 chrUextra 9655601 9656305 -19348351 + R1_DM LINE R1 897 1598 -3758 8 658 6301 19 21 0 chrUextra 9656405 9657177 -19347479 + R1_DM LINE R1 2383 3170 -2186 8 658 1167 7 0 0 chrUextra 9657531 9657666 -19346990 - 5S_DM RNA RNA 0 135 1 8 658 1167 7 0 0 chrUextra 9657890 9658025 -19346631 - 5S_DM RNA RNA 0 135 1 8 658 2227 0 0 0 chrUextra 9658149 9658401 -19346255 + ROO_LTR LTR Pao 177 428 0 8 658 1578 27 0 0 chrUextra 9658402 9658921 -19345735 + (TTA)n Simple_repeat Simple_repeat 1 519 0 8 658 895 129 0 0 chrUextra 9659021 9659160 -19345496 + FW_DM LINE Jockey 2985 3123 -1569 8 658 2141 83 5 44 chrUextra 9659198 9659793 -19344863 - DMSAT6 Satellite Satellite -3 571 1 8 658 6700 1 1 1 chrUextra 9659893 9660665 -19343991 - SSU-rRNA_Dme rRNA rRNA -776 1219 448 8 658 257 65 0 61 chrUextra 9660765 9660814 -19343842 + (TAA)n Simple_repeat Simple_repeat 3 48 0 8 658 1371 145 93 13 chrUextra 9660816 9661116 -19343540 + MDG1_LTR LTR Gypsy 89 412 -30 8 658 1402 173 39 2 chrUextra 9661117 9661537 -19343119 + BS3_DM LINE Jockey 1 221 -1569 8 658 3104 177 12 19 chrUextra 9661637 9662384 -19342272 + SAR_DM Satellite Satellite 378 1119 -353 8 658 316 177 40 50 chrUextra 9662307 9662408 -19342248 - XDMR_DM Unknown Unknown -9 351 252 8 658 5499 55 4 13 chrUextra 9662508 9663279 -19341377 - BATUMI_I LTR Pao -4302 3661 2898 8 658 6261 19 0 0 chrUextra 9663379 9664150 -19340506 - PROTOP_A DNA P -5 1100 330 8 658 1006 181 45 9 chrUextra 9664250 9664998 -19339658 + SAR_DM Satellite Satellite 1 774 -680 8 658 359 138 92 0 chrUextra 9665811 9665876 -19338780 - G3_DM LINE Jockey -4026 579 509 8 658 2171 4 0 0 chrUextra 9665992 9666246 -19338410 - DOC LINE Jockey -2031 2694 2441 8 658 2096 194 16 18 chrUextra 9666242 9666763 -19337893 + SAR_DM Satellite Satellite 1 520 -411 8 658 1378 199 152 35 chrUextra 9666943 9667424 -19337232 + Gypsy12_LTR LTR Gypsy 1158 1694 -642 8 658 1379 122 9 14 chrUextra 9667413 9667629 -19337027 + Gypsy12_I LTR Gypsy 223 437 -5109 8 658 6545 32 3 0 chrUextra 9667734 9668505 -19336151 + R1_DM LINE R1 4221 4993 -363 8 658 7026 3 0 0 chrUextra 9668605 9669376 -19335280 - DM412 LTR Gypsy -3901 2996 2226 8 658 3675 171 9 17 chrUextra 9669477 9670233 -19334423 + SAR_DM Satellite Satellite 369 1118 -354 8 658 366 182 33 22 chrUextra 9670157 9670247 -19334409 - XDMR_DM Unknown Unknown -10 350 260 8 658 3694 187 5 7 chrUextra 9670350 9671118 -19333538 - SAR_DM Satellite Satellite -514 958 192 8 658 6788 10 0 1 chrUextra 9671218 9671989 -19332667 - STALKER4_I LTR Gypsy -4572 1958 1189 8 658 2780 64 0 0 chrUextra 9672089 9672434 -19332222 + R1_DM LINE R1 1449 1793 -3563 8 658 2119 156 0 68 chrUextra 9672435 9672833 -19331823 + R1_DM LINE R1 310 680 -4676 8 658 5674 18 1 1 chrUextra 9672960 9673641 -19331015 + IDEFIX_I LTR Gypsy 4948 5628 0 8 658 739 33 0 0 chrUextra 9673641 9673731 -19330925 + IDEFIX_LTR LTR Gypsy 1 90 -504 8 658 5222 73 64 5 chrUextra 9673831 9674428 -19330228 - IDEFIX_I LTR Gypsy -4372 1256 631 8 658 183 42 0 0 chrUextra 9674428 9674452 -19330204 + (TAA)n Simple_repeat Simple_repeat 3 26 0 8 658 5222 73 64 5 chrUextra 9674452 9674602 -19330054 - IDEFIX_I LTR Gypsy -4998 630 467 8 658 6517 28 0 12 chrUextra 9676444 9677215 -19327441 + FW_DM LINE Jockey 959 1720 -2972 8 658 623 32 21 11 chrUextra 9677315 9677410 -19327246 + NTS_DM Other Other 106 201 -39 8 658 936 9 0 27 chrUextra 9677462 9677574 -19327082 + NTS_DM Other Other 25 133 -107 8 658 1320 18 0 12 chrUextra 9677574 9677740 -19326916 + NTS_DM Other Other 38 201 -39 8 658 936 9 0 27 chrUextra 9677792 9677904 -19326752 + NTS_DM Other Other 25 133 -107 8 658 1350 18 0 6 chrUextra 9677904 9678069 -19326587 + NTS_DM Other Other 38 201 -39 8 658 6212 53 8 4 chrUextra 9678186 9678957 -19325699 + IDEFIX_I LTR Gypsy 2259 3032 -2596 8 658 401 0 0 0 chrUextra 9679057 9679101 -19325555 - QUASIMODO_LTR LTR Gypsy -613 45 2 8 658 401 103 15 0 chrUextra 9679101 9679169 -19325487 + (TA)n Simple_repeat Simple_repeat 2 70 0 8 658 237 232 0 0 chrUextra 9679246 9679315 -19325341 + (TA)n Simple_repeat Simple_repeat 2 70 0 8 658 21 0 0 0 chrUextra 9679417 9679438 -19325218 + AT_rich Low_complexity Low_complexity 1 21 0 8 658 277 253 90 50 chrUextra 9679511 9679611 -19325045 + DNAREP1_DM LINE Penelope 489 592 -2 8 658 2565 91 20 19 chrUextra 9679928 9680666 -19323990 - DMSAT6 Satellite Satellite -14 738 1 8 658 7120 5 1 0 chrUextra 9680800 9681570 -19323086 - Copia2_I LTR Copia -571 3591 2821 8 658 1776 46 160 0 chrUextra 9682204 9682441 -19322215 + PROTOP DNA P 1 275 -4205 8 658 2589 173 14 9 chrUextra 9682541 9683312 -19321344 + SAR_DM Satellite Satellite 1 774 -677 8 658 3536 19 7 16 chrUextra 9683412 9683931 -19320725 - ROO_I LTR Pao -7648 608 1 8 658 2349 4 0 0 chrUextra 9683931 9684183 -19320473 - ROO_LTR LTR Pao 0 428 177 8 658 1317 19 0 0 chrUextra 9684283 9684437 -19320219 + R1_DM LINE R1 2616 2769 -2587 8 658 5462 19 0 0 chrUextra 9684435 9685054 -19319602 + R1_DM LINE R1 3040 3658 -1698 8 658 6856 16 0 0 chrUextra 9685154 9685925 -19318731 + FW_DM LINE Jockey 1285 2055 -2637 8 658 374 0 0 0 chrUextra 9686025 9686068 -19318588 + NOMAD_I LTR Gypsy 6530 6572 0 8 658 4777 2 0 0 chrUextra 9686068 9686586 -19318070 + NOMAD_LTR LTR Gypsy 1 518 0 8 658 1131 74 10 10 chrUextra 9686586 9686796 -19317860 - Stalker2_I LTR Gypsy -1279 6123 6002 8 658 418 206 0 10 chrUextra 9686896 9686994 -19317662 + DMLTR5 LTR Gypsy 170 266 0 8 658 347 93 661 14 chrUextra 9686993 9687125 -19317531 + HMSBEAGLE_I LTR Gypsy 1 221 -6308 8 658 3218 14 0 13 chrUextra 9687767 9688139 -19316517 + FW_DM LINE Jockey 2120 2486 -2206 8 658 3578 7 0 0 chrUextra 9688135 9688538 -19316118 + FW_DM LINE Jockey 2608 3010 -1682 8 658 1158 122 0 0 chrUextra 9688638 9688972 -19315684 + (TA)n Simple_repeat Simple_repeat 1 334 0 8 658 1179 117 0 0 chrUextra 9688972 9689152 -19315504 + (CATA)n Simple_repeat Simple_repeat 1 180 0 8 658 2014 24 8 12 chrUextra 9689158 9689408 -19315248 + BLASTOPIA_LTR LTR Gypsy 1 249 -26 8 658 2515 62 9 3 chrUextra 9689509 9689830 -19314826 + Gypsy10_LTR LTR Gypsy 42 364 0 8 658 3085 73 11 33 chrUextra 9689830 9690280 -19314376 + Gypsy10_I LTR Gypsy 1 440 -4838 8 658 359 21 21 0 chrUextra 9690380 9690428 -19314228 - G4_DM LINE Jockey -91 3765 3717 8 658 1225 21 0 0 chrUextra 9690426 9690566 -19314090 - G4_DM LINE Jockey -267 3589 3450 8 658 1790 256 22 29 chrUextra 9690564 9691151 -19313505 + TOM_I LTR Gypsy 1817 2399 -3713 8 658 1388 246 24 11 chrUextra 9691262 9691640 -19313016 + BS LINE Jockey 2416 2798 -2328 8 658 326 185 122 12 chrUextra 9691890 9691972 -19312684 + BS LINE Jockey 3142 3232 -1894 8 658 3251 98 27 23 chrUextra 9692124 9692638 -19312018 + I_DM LINE I 3820 4335 -1896 8 658 5111 10 0 13 chrUextra 9692993 9693596 -19311060 - Gypsy4_I LTR Gypsy -5693 595 1 8 658 1491 18 6 0 chrUextra 9693596 9693764 -19310892 - Gypsy4_LTR LTR Gypsy 0 287 119 8 658 3289 3 0 3 chrUextra 9694279 9694635 -19310021 - ROO_LTR LTR Pao 0 428 74 8 658 6532 3 3 3 chrUextra 9694735 9695506 -19309150 - ROVER-I_DM LTR Gypsy -141 6443 5673 8 658 3141 156 70 3 chrUextra 9695606 9696373 -19308283 - TAHRE LINE telomeric -4591 1490 504 8 658 4570 78 2 3 chrUextra 9696477 9697084 -19307572 + HOBO DNA hAT 345 950 -2066 8 658 578 64 13 0 chrUextra 9697085 9697163 -19307493 + HOBO DNA hAT 1100 1178 -1838 8 658 3404 185 19 23 chrUextra 9697351 9698118 -19306538 - SAR_DM Satellite Satellite -593 764 1 8 658 1394 31 0 0 chrUextra 9698219 9698379 -19306277 + Invader2_LTR LTR Gypsy 107 266 0 8 658 5147 5 23 2 chrUextra 9698379 9698990 -19305666 + Invader2_I LTR Gypsy 1 624 -3968 8 82 1234 171 24 9 chrUextra 9699090 9699415 -19305241 - SAR_DM Satellite Satellite -865 329 1 8 659 1030 184 32 11 chrUextra 9699426 9699861 -19304795 - SAR_DM Satellite Satellite -683 443 1 8 659 2654 101 4 29 chrUextra 9699961 9700728 -19303928 + DMSAT6 Satellite Satellite 1 747 -29 8 659 534 119 36 0 chrUextra 9701122 9701206 -19303450 - NTS_DM Other Other -150 90 4 8 659 1389 6 0 18 chrUextra 9701316 9701481 -19303175 - NTS_DM Other Other -78 162 1 8 659 872 17 33 25 chrUextra 9701481 9701603 -19303053 - NTS_DM Other Other 0 240 118 8 659 6949 4 3 1 chrUextra 9701703 9702474 -19302182 - BS LINE Jockey -2628 2498 1727 8 659 6426 21 84 0 chrUextra 9702574 9703345 -19301311 - R1_DM LINE R1 -170 5186 4351 8 659 5963 50 9 8 chrUextra 9703445 9704212 -19300444 - MDG1_I LTR Gypsy -428 6168 5401 8 659 2321 55 10 3 chrUextra 9704332 9704640 -19300016 + IDEFIX_I LTR Gypsy 5319 5628 0 8 659 3850 25 0 0 chrUextra 9704640 9705087 -19299569 + IDEFIX_LTR LTR Gypsy 1 447 -147 8 659 1810 10 5 0 chrUextra 9705187 9705391 -19299265 + FW_DM LINE Jockey 1989 2193 -2499 8 659 5013 9 9 0 chrUextra 9705390 9705958 -19298698 + FW_DM LINE Jockey 2600 3172 -1520 8 659 7043 1 1 4 chrUextra 9706058 9706829 -19297827 - SSU-rRNA_Dme rRNA rRNA -625 1370 602 8 659 5933 53 25 14 chrUextra 9706929 9707700 -19296956 + TART LINE telomeric 94 872 -13605 8 659 468 0 0 0 chrUextra 9707800 9707852 -19296804 + (CACAA)n Simple_repeat Simple_repeat 5 56 0 8 659 6458 7 0 0 chrUextra 9707852 9708571 -19296085 - DMRT1B LINE R1 -140 5043 4325 8 659 7187 0 1 1 chrUextra 9708671 9709442 -19295214 + LSU-rRNA_Dme rRNA rRNA 2817 3587 -313 8 659 6989 1 3 0 chrUextra 9709542 9710312 -19294344 - ACCORD2_I LTR Gypsy -968 6244 5473 8 659 1440 0 0 0 chrUextra 9711284 9711444 -19293212 + (TCTA)n Simple_repeat Simple_repeat 3 162 0 8 659 4298 0 0 0 chrUextra 9712155 9712613 -19292043 + TABOR_LTR LTR Gypsy 49 506 0 8 659 1821 89 93 0 chrUextra 9712613 9712926 -19291730 - TART_B1 LINE telomeric -8141 2513 2172 8 659 3689 59 2 4 chrUextra 9713026 9713486 -19291170 - R1_DM LINE R1 -4818 538 80 8 659 2355 22 15 0 chrUextra 9713528 9713797 -19290859 - R1_DM LINE R1 0 5356 5084 8 659 623 292 44 82 chrUextra 9713898 9714466 -19290190 + BURDOCK_I LTR Gypsy 3147 4198 -2374 8 659 2412 101 22 30 chrUextra 9714770 9715539 -19289117 + DMSAT6 Satellite Satellite 1 763 -256 8 659 2923 12 0 3 chrUextra 9715639 9715969 -19288687 + DM176_LTR LTR Gypsy 179 507 0 8 659 3839 12 0 0 chrUextra 9715980 9716410 -19288246 + DM176_LTR LTR Gypsy 1 430 -77 8 659 4830 11 0 0 chrUextra 9716513 9717053 -19287603 + PROTOP_A DNA P 566 1105 0 8 659 264 176 0 19 chrUextra 9717091 9717143 -19287513 - HMSBEAGLE_I LTR Gypsy -6308 221 171 8 659 376 49 65 16 chrUextra 9717157 9717219 -19287437 - HMSBEAGLE_I LTR Gypsy -6464 65 1 8 659 286 130 0 18 chrUextra 9717218 9717273 -19287383 - DMLTR5 LTR Gypsy 0 266 213 8 659 754 209 6 19 chrUextra 9717513 9717669 -19286987 - HETRP_DM Satellite Satellite -190 1682 1529 8 659 684 197 13 32 chrUextra 9717823 9717980 -19286676 - HETRP_DM Satellite Satellite -190 1682 1529 8 659 268 196 0 19 chrUextra 9718325 9718377 -19286279 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 659 268 196 0 19 chrUextra 9718417 9718469 -19286187 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 659 268 196 0 19 chrUextra 9718509 9718561 -19286095 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 659 278 176 0 19 chrUextra 9718592 9718644 -19286012 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 659 22 56 0 0 chrUextra 9718657 9718693 -19285963 + AT_rich Low_complexity Low_complexity 1 36 0 8 659 915 18 0 27 chrUextra 9718719 9718831 -19285825 + NTS_DM Other Other 25 133 -107 8 659 1284 37 0 6 chrUextra 9718831 9718996 -19285660 + NTS_DM Other Other 38 201 -39 8 659 3146 60 5 17 chrUextra 9720113 9720519 -19284137 - Baggins1 LINE LOA -262 5191 4791 8 659 6519 30 3 1 chrUextra 9720865 9721636 -19283020 - R1_DM LINE R1 -1513 3843 3072 8 659 1118 0 8 0 chrUextra 9721736 9721864 -19282792 - R1_DM LINE R1 -1202 4154 4026 8 659 5443 34 5 0 chrUextra 9721866 9722507 -19282149 - R1_DM LINE R1 -1679 3677 3034 8 659 6447 17 0 0 chrUextra 9722608 9723378 -19281278 - R2_DM LINE R2 -2314 1293 524 8 659 6465 19 0 0 chrUextra 9723478 9724249 -19280407 - R1_DM LINE R1 -637 4719 3949 8 659 2055 4 0 0 chrUextra 9724349 9724586 -19280070 - SSU-rRNA_Dme rRNA rRNA -1758 237 1 8 659 32 0 0 0 chrUextra 9724718 9724750 -19279906 + AT_rich Low_complexity Low_complexity 1 32 0 8 659 28 48 0 0 chrUextra 9725078 9725120 -19279536 + AT_rich Low_complexity Low_complexity 1 42 0 8 659 2549 176 5 12 chrUextra 9725229 9725991 -19278665 - SAR_DM Satellite Satellite -396 756 1 8 659 2550 7 3 0 chrUextra 9726091 9726390 -19278266 - Invader1_LTR LTR Gypsy -123 300 1 8 659 3924 8 2 0 chrUextra 9726390 9726861 -19277795 - Invader1_I LTR Gypsy 0 3186 2715 8 659 2274 221 48 10 chrUextra 9726964 9727658 -19276998 - DM297_I LTR Gypsy -2257 3910 3191 8 659 3340 12 12 0 chrUextra 9727831 9728233 -19276423 - PROTOP_A DNA P -698 407 1 8 659 2471 88 22 6 chrUextra 9728233 9728598 -19276058 - Gypsy2_I LTR Gypsy -338 5797 5427 8 659 1597 343 5 5 chrUextra 9728702 9729469 -19275187 + GTWIN_I LTR Gypsy 3200 3966 -2455 8 659 6026 42 8 1 chrUextra 9729571 9730341 -19274315 + R1_DM LINE R1 2760 3534 -1822 8 659 2498 101 5 17 chrUextra 9731326 9732081 -19272575 + DMSAT6 Satellite Satellite 1 745 -74 8 659 817 0 0 0 chrUextra 9732181 9732277 -19272379 - NTS_DM Other Other -107 133 38 8 659 832 9 9 27 chrUextra 9732277 9732388 -19272268 - NTS_DM Other Other -107 133 25 8 659 21 57 0 0 chrUextra 9732414 9732449 -19272207 + AT_rich Low_complexity Low_complexity 1 35 0 8 659 1252 18 0 6 chrUextra 9732449 9732614 -19272042 - NTS_DM Other Other -39 201 38 8 659 852 18 0 27 chrUextra 9732614 9732726 -19271930 - NTS_DM Other Other -107 133 25 8 659 1215 18 6 6 chrUextra 9732778 9732942 -19271714 - NTS_DM Other Other -39 201 38 8 659 321 264 6 15 chrUextra 9733569 9733699 -19270957 - Gypsy4_I LTR Gypsy -2980 3308 3232 8 659 3235 182 22 12 chrUextra 9733923 9734691 -19269965 - SAR_DM Satellite Satellite -435 1037 262 8 659 3032 190 7 11 chrUextra 9734794 9735529 -19269127 - SAR_DM Satellite Satellite -549 923 192 8 659 751 103 0 16 chrUextra 9735433 9735561 -19269095 + ARS406_DM Unknown Unknown 1 126 -227 8 659 6077 27 1 4 chrUextra 9735661 9736431 -19268225 - R1_DM LINE R1 -1295 4061 3294 8 659 27 29 0 0 chrUextra 9736688 9736722 -19267934 + AT_rich Low_complexity Low_complexity 1 34 0 8 659 752 37 0 115 chrUextra 9737045 9737167 -19267489 + Baggins1 LINE LOA 5346 5453 0 8 659 1503 72 3 0 chrUextra 9737661 9738030 -19266626 + (CAAGA)n Simple_repeat Simple_repeat 1 370 0 8 659 347 283 0 0 chrUextra 9738317 9738423 -19266233 + Copia2_I LTR Copia 567 672 -3490 8 659 2979 67 0 9 chrUextra 9739142 9739565 -19265091 + R1_DM LINE R1 193 611 -4745 8 659 1631 66 0 0 chrUextra 9739567 9739780 -19264876 + R1_DM LINE R1 1247 1459 -3897 8 659 911 25 8 0 chrUextra 9739791 9739911 -19264745 + R1_DM LINE R1 1556 1676 -3680 8 659 2776 165 20 8 chrUextra 9740011 9740621 -19264035 + SAR_DM Satellite Satellite 287 903 -569 8 659 884 93 53 0 chrUextra 9740628 9740778 -19263878 - ARS406_DM Unknown Unknown -195 158 1 8 659 21 95 0 0 chrUextra 9740883 9740946 -19263710 + AT_rich Low_complexity Low_complexity 1 63 0 8 659 34 24 0 0 chrUextra 9741159 9741200 -19263456 + AT_rich Low_complexity Low_complexity 1 41 0 8 659 4540 55 43 0 chrUextra 9741861 9742513 -19262143 + PROTOP DNA P 74 753 -3727 8 659 3113 180 10 18 chrUextra 9742621 9743391 -19261265 - SAR_DM Satellite Satellite -1033 763 1 8 659 3181 183 10 12 chrUextra 9743493 9744261 -19260395 + SAR_DM Satellite Satellite 234 1000 -472 8 659 6480 0 1 0 chrUextra 9744368 9745131 -19259525 + MDG3_I LTR Gypsy 3297 4060 -926 8 659 6105 12 47 9 chrUextra 9745231 9746001 -19258655 - R2_DM LINE R2 -2382 1225 427 8 659 2267 189 13 108 chrUextra 9746105 9746871 -19257785 - SAR_DM Satellite Satellite -281 1191 499 8 659 3443 205 21 0 chrUextra 9747013 9747741 -19256915 + HETA LINE telomeric 1130 1872 -4209 8 659 4764 2 0 0 chrUextra 9747841 9748386 -19256270 - DOC LINE Jockey -4180 545 1 8 659 1656 9 27 0 chrUextra 9748387 9748611 -19256045 + PROTOP_A DNA P 629 858 -247 8 659 5864 29 0 17 chrUextra 9748711 9749481 -19255175 - CIRCE LINE Composite -1483 4873 4117 8 659 3361 2 2 0 chrUextra 9749581 9750027 -19254629 - QUASIMODO_I LTR Gypsy -57 6003 5557 8 659 2632 3 0 3 chrUextra 9750025 9750351 -19254305 - QUASIMODO_I LTR Gypsy -1356 4704 4380 8 659 6519 9 5 0 chrUextra 9750451 9751221 -19253435 + R2_DM LINE R2 282 1055 -2552 8 659 21 89 0 0 chrUextra 9751802 9751858 -19252798 + AT_rich Low_complexity Low_complexity 1 56 0 8 659 1856 0 5 0 chrUextra 9751877 9752091 -19252565 - SSU-rRNA_Dme rRNA rRNA 0 1995 1781 8 659 3116 210 23 23 chrUextra 9752191 9753816 -19250840 - SAR_DM Satellite Satellite -1082 1624 1 8 659 977 117 6 12 chrUextra 9753931 9754104 -19250552 + SAR_DM Satellite Satellite 732 903 -569 8 659 2327 196 9 7 chrUextra 9754119 9754699 -19249957 + SAR_DM Satellite Satellite 496 1076 -396 8 659 4994 111 0 1 chrUextra 9754801 9755569 -19249087 - HETA LINE telomeric -3282 2799 2033 8 659 5929 31 5 3 chrUextra 9755671 9756441 -19248215 - NINJA_I LTR Pao -4958 1053 282 8 659 2623 136 18 10 chrUextra 9756541 9757308 -19247348 - G2_DM LINE Jockey -2794 308 4 8 659 4518 129 48 1 chrUextra 9757411 9758179 -19246477 - DMRT1B LINE R1 -4345 838 35 8 659 201 121 0 0 chrUextra 9758506 9758539 -19246117 + (TC)n Simple_repeat Simple_repeat 1 33 0 8 659 28 48 0 0 chrUextra 9759417 9759459 -19245197 + AT_rich Low_complexity Low_complexity 1 42 0 8 659 488 119 36 0 chrUextra 9759731 9759815 -19244841 - NTS_DM Other Other -150 90 4 8 659 6593 1 0 0 chrUextra 9760021 9760791 -19243865 + ROO_I LTR Pao 1311 2080 -6176 8 659 930 75 8 20 chrUextra 9760895 9761642 -19243014 + RSP Satellite Satellite 1 738 0 8 659 4386 25 0 5 chrUextra 9761761 9762320 -19242336 + CIRCE LINE Composite 4425 4980 -1376 8 659 569 338 23 16 chrUextra 9762651 9763019 -19241637 + GTWIN_I LTR Gypsy 3254 3538 -2883 8 659 6325 29 0 1 chrUextra 9764373 9765141 -19239515 - MAX_I LTR Pao -3125 4789 4023 8 659 840 9 0 35 chrUextra 9765244 9765357 -19239299 - NTS_DM Other Other -107 133 25 8 659 22 56 0 0 chrUextra 9765383 9765419 -19239237 + AT_rich Low_complexity Low_complexity 1 36 0 8 659 255 125 0 0 chrUextra 9765432 9765472 -19239184 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 659 246 150 0 0 chrUextra 9765515 9765555 -19239101 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 659 246 150 0 0 chrUextra 9765607 9765647 -19239009 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 659 246 150 0 0 chrUextra 9765699 9765739 -19238917 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 659 246 150 0 0 chrUextra 9765791 9765831 -19238825 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 659 29 28 0 0 chrUextra 9765836 9765872 -19238784 + AT_rich Low_complexity Low_complexity 1 36 0 8 659 551 0 15 0 chrUextra 9765944 9766011 -19238645 - LSU-rRNA_Dme rRNA rRNA 0 3900 3833 8 659 28 48 0 0 chrUextra 9766156 9766198 -19238458 + AT_rich Low_complexity Low_complexity 1 42 0 8 659 2044 142 85 22 chrUextra 9766205 9766831 -19237825 + Stalker2_I LTR Gypsy 291 999 -5531 8 659 4238 44 66 5 chrUextra 9766981 9767751 -19236905 - BATUMI_I LTR Pao -2502 5461 4645 8 659 1422 0 0 0 chrUextra 9767851 9768009 -19236647 + (CACAA)n Simple_repeat Simple_repeat 4 161 0 8 659 5907 35 21 4 chrUextra 9768721 9769491 -19235165 + IDEFIX_I LTR Gypsy 2441 3223 -2405 8 659 1620 43 0 3 chrUextra 9769803 9770151 -19234505 + (CAAGA)n Simple_repeat Simple_repeat 1 346 0 8 659 5584 21 0 4 chrUextra 9770523 9771231 -19233425 - CIRCE LINE Composite -1376 4980 4276 8 659 6114 8 5 1 chrUextra 9771331 9772101 -19232555 + STALKER4_I LTR Gypsy 5643 6415 -115 8 659 4525 61 11 26 chrUextra 9772201 9772859 -19231797 - DMCR1A LINE CR1 -1000 3470 2823 8 659 877 36 0 0 chrUextra 9772859 9772970 -19231686 - DMCR1A LINE CR1 -1870 2600 2490 8 659 6225 32 0 0 chrUextra 9773071 9773841 -19230815 + MAX_I LTR Pao 5048 5817 -2097 8 659 2250 132 41 12 chrUextra 9773944 9774700 -19229956 + DMSAT6 Satellite Satellite 1 777 -97 8 659 3203 186 11 8 chrUextra 9774813 9775578 -19229078 - SAR_DM Satellite Satellite -411 1061 295 8 659 668 179 7 14 chrUextra 9775693 9775835 -19228821 + HETRP_DM Satellite Satellite 1529 1669 -203 8 659 655 186 7 14 chrUextra 9775998 9776140 -19228516 + HETRP_DM Satellite Satellite 1529 1669 -203 8 659 643 186 7 14 chrUextra 9776282 9776424 -19228232 + HETRP_DM Satellite Satellite 1529 1669 -203 8 659 3467 166 13 13 chrUextra 9776551 9777321 -19227335 + SAR_DM Satellite Satellite 268 1037 -435 8 659 3624 176 13 10 chrUextra 9777422 9778191 -19226465 - SAR_DM Satellite Satellite -435 1037 267 8 659 3829 170 9 9 chrUextra 9778291 9779061 -19225595 + SAR_DM Satellite Satellite 256 1025 -447 8 659 6381 39 36 0 chrUextra 9779161 9779931 -19224725 - Baggins1 LINE LOA -3802 1651 854 8 659 7060 5 0 1 chrUextra 9780031 9780801 -19223855 + FW_DM LINE Jockey 3492 4260 -432 8 659 6596 30 9 1 chrUextra 9780901 9781671 -19222985 - NINJA_I LTR Pao -2385 3626 2851 8 659 21 0 0 0 chrUextra 9781924 9781945 -19222711 + AT_rich Low_complexity Low_complexity 1 21 0 8 659 2311 100 9 5 chrUextra 9782195 9782541 -19222115 + IDEFIX_I LTR Gypsy 13 300 -5328 8 659 6304 24 3 1 chrUextra 9782687 9783411 -19221245 - R1_DM LINE R1 0 5356 4632 8 659 6919 10 0 0 chrUextra 9783511 9784281 -19220375 - Invader2_I LTR Gypsy -2994 1598 829 8 659 7207 1 0 0 chrUextra 9784381 9785151 -19219505 - LSU-rRNA_Dme rRNA rRNA -418 3482 2713 8 659 6689 30 0 0 chrUextra 9785251 9786021 -19218635 - R1_DM LINE R1 -2046 3310 2541 8 659 1445 35 223 0 chrUextra 9786122 9786319 -19218337 - PROTOP DNA P -4239 241 1 8 659 2556 95 31 23 chrUextra 9786993 9787761 -19216895 + DMSAT6 Satellite Satellite 1 773 -71 8 659 237 108 0 0 chrUextra 9787960 9787997 -19216659 + (TC)n Simple_repeat Simple_repeat 1 37 0 8 659 6528 1 0 34 chrUextra 9788731 9789501 -19215155 + LSU-rRNA_Dme rRNA rRNA 108 851 -3049 8 659 1237 73 6 0 chrUextra 9789601 9789765 -19214891 - R1_DM LINE R1 -5191 165 1 8 659 4980 25 2 3 chrUextra 9789798 9790367 -19214289 - R1_DM LINE R1 0 5356 4789 8 659 253 202 12 23 chrUextra 9790517 9790603 -19214053 + (TAA)n Simple_repeat Simple_repeat 2 86 0 8 659 544 244 45 12 chrUextra 9790610 9790773 -19213883 + Gypsy_I LTR Gypsy 859 983 -5524 8 659 4002 2 0 0 chrUextra 9790773 9791201 -19213455 - ROO_LTR LTR Pao 0 428 1 8 659 347 0 25 0 chrUextra 9791201 9791241 -19213415 - ROO_I LTR Pao 0 8256 8216 8 659 1572 0 0 0 chrUextra 9791341 9791512 -19213144 - ROO_LTR LTR Pao -257 171 1 8 659 5480 5 0 0 chrUextra 9791512 9792111 -19212545 + DOC LINE Jockey 2341 2939 -1786 8 659 6846 9 3 3 chrUextra 9792211 9792981 -19211675 + Invader2_I LTR Gypsy 672 1441 -3151 8 659 6392 35 44 1 chrUextra 9793081 9793850 -19210806 + R1_DM LINE R1 1297 2098 -3258 8 659 6691 21 0 0 chrUextra 9793950 9794719 -19209937 - NINJA_I LTR Pao -4846 1165 397 8 659 811 330 34 65 chrUextra 9794824 9795587 -19209069 - MICROPIA_I LTR Gypsy -3331 1145 407 8 659 6971 8 1 0 chrUextra 9795688 9796457 -19208199 + TART LINE telomeric 11797 12566 -1911 8 659 637 0 0 0 chrUextra 9796557 9796630 -19208026 - Copia2_LTR_DM LTR Copia -124 74 2 8 659 1448 18 0 5 chrUextra 9796630 9796851 -19207805 + (TTA)n Simple_repeat Simple_repeat 1 220 0 8 659 1589 134 45 36 chrUextra 9796872 9797099 -19207557 + Jockey2 LINE Jockey 3089 3318 -110 8 659 987 32 0 0 chrUextra 9797099 9797222 -19207434 + (TTA)n Simple_repeat Simple_repeat 3 125 0 8 659 1589 134 45 36 chrUextra 9797222 9797326 -19207330 + Jockey2 LINE Jockey 3319 3423 -5 8 659 2749 191 55 26 chrUextra 9797426 9798195 -19206461 + SAR_DM Satellite Satellite 458 1248 -224 8 659 3054 145 131 13 chrUextra 9798298 9798849 -19205807 - DMRT1C LINE R1 -70 5373 4758 8 659 783 147 8 0 chrUextra 9798865 9798994 -19205662 - DMRT1C LINE R1 -796 4647 4518 8 659 361 65 0 0 chrUextra 9798995 9799041 -19205615 + DMCR1A LINE CR1 777 822 -3648 8 659 3218 190 16 22 chrUextra 9800033 9800802 -19203854 + SAR_DM Satellite Satellite 444 1207 -265 8 659 5555 17 2 5 chrUextra 9800902 9801539 -19203117 + R1_DM LINE R1 3648 4282 -1074 8 659 1016 18 0 0 chrUextra 9801559 9801671 -19202985 + R1_DM LINE R1 4407 4518 -838 8 659 6880 19 3 1 chrUextra 9801771 9802540 -19202116 - Copia2_I LTR Copia -1626 2536 1767 8 659 6622 35 0 3 chrUextra 9802640 9803409 -19201247 - DMCR1A LINE CR1 -2233 2237 1471 8 659 3378 181 12 24 chrUextra 9803523 9804277 -19200379 + SAR_DM Satellite Satellite 369 1113 -359 8 659 3420 49 7 10 chrUextra 9804378 9805147 -19199509 + MICROPIA_I LTR Gypsy 1410 2145 -2331 8 659 624 26 13 0 chrUextra 9805247 9805325 -19199331 - ARS406_DM Unknown Unknown -185 168 90 8 659 3063 188 18 25 chrUextra 9805322 9806016 -19198640 + SAR_DM Satellite Satellite 1 689 -203 8 659 201 132 0 0 chrUextra 9806325 9806363 -19198293 + (TG)n Simple_repeat Simple_repeat 1 38 0 8 659 7192 3 0 0 chrUextra 9806985 9807754 -19196902 - SSU-rRNA_Dme rRNA rRNA -1029 966 198 8 659 1620 0 0 0 chrUextra 9808382 9808621 -19196035 + (TAGA)n Simple_repeat Simple_repeat 1 239 0 8 659 479 0 0 0 chrUextra 9808724 9808777 -19195879 - R1_DM LINE R1 -5303 53 1 8 659 260 30 30 0 chrUextra 9808777 9808810 -19195846 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2599 8 659 6413 1 0 0 chrUextra 9808805 9809492 -19195164 - LSU-rRNA_Dme rRNA rRNA -1247 2653 1967 8 659 3232 0 0 0 chrUextra 9809592 9809937 -19194719 + LSU-rRNA_Dme rRNA rRNA 2288 2632 -1268 8 659 3866 5 5 0 chrUextra 9809937 9810361 -19194295 + R1_DM LINE R1 1 426 -4930 8 659 319 197 101 38 chrUextra 9810461 9810540 -19194116 - DNAREP1_DM LINE Penelope -135 459 376 8 659 2927 69 71 2 chrUextra 9810758 9811151 -19193505 - Gypsy6A_LTR LTR Gypsy 0 420 1 8 659 6840 10 1 3 chrUextra 9812199 9812968 -19191688 + G_DM LINE Jockey 1342 2109 -2237 8 659 491 238 8 24 chrUextra 9813068 9813193 -19191463 + HETRP_DM Satellite Satellite 1560 1682 -190 8 659 707 190 11 69 chrUextra 9813296 9813471 -19191185 + HETRP_DM Satellite Satellite 1518 1682 -190 8 659 282 29 0 0 chrUextra 9813588 9813623 -19191033 + (GA)n Simple_repeat Simple_repeat 2 36 0 8 659 542 220 15 22 chrUextra 9813623 9813758 -19190898 + HETRP_DM Satellite Satellite 1549 1682 -190 8 659 3132 19 33 0 chrUextra 9813937 9814298 -19190358 + DMRT1B LINE R1 4572 4944 -239 8 659 3669 10 2 2 chrUextra 9814296 9814706 -19189950 + DMRT1A LINE R1 1684 2093 -3090 8 659 6871 9 1 1 chrUextra 9815676 9816444 -19188212 - R1_DM LINE R1 -1175 4181 3414 8 659 3280 194 18 25 chrUextra 9817413 9818181 -19186475 + SAR_DM Satellite Satellite 1 762 -225 8 659 3244 179 20 24 chrUextra 9818283 9819046 -19185610 + SAR_DM Satellite Satellite 352 1111 -361 8 659 6976 7 1 0 chrUextra 9819151 9819920 -19184736 - IVK_DM LINE I -2326 3076 2307 8 659 3648 177 12 10 chrUextra 9820020 9820789 -19183867 - SAR_DM Satellite Satellite -447 1025 256 8 659 4661 92 105 3 chrUextra 9820889 9821591 -19183065 + TART LINE telomeric 6897 7670 -6807 8 659 21 0 0 0 chrUextra 9821815 9821836 -19182820 + AT_rich Low_complexity Low_complexity 1 21 0 8 659 1207 149 106 32 chrUextra 9821836 9822174 -19182482 + Invader1_LTR LTR Gypsy 1 423 0 8 659 289 271 55 47 chrUextra 9822174 9822302 -19182354 + MICROPIA_I LTR Gypsy 1 129 -4347 8 659 251 365 6 6 chrUextra 9822348 9822527 -19182129 + MICROPIA_I LTR Gypsy 910 1088 -3388 8 659 255 150 0 0 chrUextra 9822637 9822677 -19181979 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 659 266 196 0 19 chrUextra 9822717 9822769 -19181887 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 659 255 196 0 19 chrUextra 9822809 9822861 -19181795 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 659 265 150 0 0 chrUextra 9822913 9822953 -19181703 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 659 266 196 0 19 chrUextra 9822993 9823045 -19181611 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 659 266 196 0 19 chrUextra 9823180 9823232 -19181424 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 659 6919 21 0 0 chrUextra 9823496 9824265 -19180391 + DIVER_I LTR Pao 1720 2488 -3155 8 659 970 0 0 0 chrUextra 9824365 9824468 -19180188 - ROO_I LTR Pao -8153 103 1 8 659 3955 2 0 5 chrUextra 9824468 9824898 -19179758 - ROO_LTR LTR Pao 0 428 1 8 659 1263 50 0 14 chrUextra 9824912 9825134 -19179522 + (CTTAT)n Simple_repeat Simple_repeat 1 219 0 8 659 554 0 0 16 chrUextra 9825234 9825298 -19179358 + IDEFIX_I LTR Gypsy 5566 5628 0 8 659 4741 7 61 0 chrUextra 9825298 9825858 -19178798 + IDEFIX_LTR LTR Gypsy 1 594 0 8 659 3664 162 14 27 chrUextra 9826103 9826870 -19177786 + SAR_DM Satellite Satellite 334 1090 -382 8 659 6942 13 0 0 chrUextra 9826972 9827741 -19176915 + Gypsy4_I LTR Gypsy 481 1249 -5039 8 659 3182 172 11 61 chrUextra 9827841 9828594 -19176062 + SAR_DM Satellite Satellite 405 1119 -353 8 659 401 200 0 20 chrUextra 9828508 9828610 -19176046 - XDMR_DM Unknown Unknown 0 360 261 8 659 3299 176 7 19 chrUextra 9828710 9829337 -19175319 + SAR_DM Satellite Satellite 1 720 -393 8 659 438 220 0 9 chrUextra 9829337 9829447 -19175209 - XDMR_DM Unknown Unknown 0 360 252 8 659 3299 176 7 19 chrUextra 9829447 9829479 -19175177 + SAR_DM Satellite Satellite 721 759 -354 8 659 6967 8 1 1 chrUextra 9829579 9830348 -19174308 - R1_DM LINE R1 -866 4490 3722 8 660 4064 83 112 33 chrUextra 9831318 9831976 -19172680 - Gypsy12_I LTR Gypsy -4836 710 1 8 660 641 138 18 0 chrUextra 9831976 9832085 -19172571 - Gypsy12A_LTR LTR Gypsy 0 2280 2170 8 660 1234 24 0 6 chrUextra 9833075 9833240 -19171416 - NTS_DM Other Other -39 201 38 8 660 870 9 0 27 chrUextra 9833240 9833352 -19171304 - NTS_DM Other Other -107 133 25 8 660 22 56 0 0 chrUextra 9833378 9833414 -19171242 + AT_rich Low_complexity Low_complexity 1 36 0 8 660 230 150 0 0 chrUextra 9833427 9833467 -19171189 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 660 246 150 0 0 chrUextra 9833510 9833550 -19171106 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 660 246 150 0 0 chrUextra 9833602 9833642 -19171014 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 660 246 150 0 0 chrUextra 9833694 9833734 -19170922 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 660 22 56 0 0 chrUextra 9833739 9833775 -19170881 + AT_rich Low_complexity Low_complexity 1 36 0 8 660 2133 0 4 0 chrUextra 9833924 9834177 -19170479 - Copia_I LTR Copia -4339 254 1 8 660 232 0 0 0 chrUextra 9834177 9834211 -19170445 - Copia_LTR LTR Copia 0 276 243 8 660 2286 4 0 0 chrUextra 9834211 9834487 -19170169 - Copia_LTR LTR Copia 0 276 1 8 660 333 68 0 0 chrUextra 9834793 9834837 -19169819 + (GAAAA)n Simple_repeat Simple_repeat 2 45 0 8 660 1620 0 0 0 chrUextra 9834837 9835017 -19169639 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 8 660 2176 159 49 180 chrUextra 9835662 9836431 -19168225 - TAHRE LINE telomeric -2715 7748 7044 8 660 6725 0 3 0 chrUextra 9836531 9837300 -19167356 - LSU-rRNA_Dme rRNA rRNA -73 3827 3057 8 660 205 191 0 0 chrUextra 9837463 9837505 -19167151 + A-rich Low_complexity Low_complexity 1 42 0 8 660 275 260 9 71 chrUextra 9837633 9837745 -19166911 + MDG1_I LTR Gypsy 1358 1462 -5134 8 660 669 199 133 21 chrUextra 9837859 9838169 -19166487 + MDG1_I LTR Gypsy 1661 2076 -4520 8 660 3151 40 32 9 chrUextra 9838273 9838714 -19165942 + QUASIMODO_LTR LTR Gypsy 49 658 0 8 660 2233 42 16 0 chrUextra 9838727 9839038 -19165618 + IDEFIX_I LTR Gypsy 4442 4757 -871 8 660 34 24 0 0 chrUextra 9839713 9839754 -19164902 + AT_rich Low_complexity Low_complexity 1 41 0 8 660 6003 27 1 1 chrUextra 9840037 9840776 -19163880 + R1_DM LINE R1 4583 5321 -35 8 660 6354 19 1 1 chrUextra 9840876 9841645 -19163011 - DMRT1A LINE R1 -598 4585 3817 8 660 6036 0 4 7 chrUextra 9841745 9842514 -19162142 - DM412 LTR Gypsy -5300 1597 831 8 660 6497 8 1 1 chrUextra 9842614 9843383 -19161273 - R1_DM LINE R1 -866 4490 3722 8 660 1891 4 4 0 chrUextra 9843483 9843708 -19160948 + R1_DM LINE R1 4841 5066 -290 8 660 934 35 0 0 chrUextra 9843705 9843819 -19160837 + R1_DM LINE R1 5243 5356 0 8 660 2190 65 7 7 chrUextra 9843852 9844161 -19160495 + R1_DM LINE R1 1 309 -5047 8 660 708 64 0 0 chrUextra 9844158 9844252 -19160404 + R1_DM LINE R1 1503 1596 -3760 8 660 2687 96 128 28 chrUextra 9844356 9845120 -19159536 - Gypsy12_I LTR Gypsy -4557 989 149 8 660 1278 35 12 0 chrUextra 9845221 9845393 -19159263 + TART LINE telomeric 3455 3628 -7026 8 660 4063 61 42 0 chrUextra 9845391 9845990 -19158666 + TART LINE telomeric 1 558 -13919 8 660 5280 27 0 0 chrUextra 9846090 9846730 -19157926 + R1_DM LINE R1 4194 4833 -523 8 660 1062 16 0 0 chrUextra 9846730 9846858 -19157798 - Stalker3_LTR LTR Gypsy 0 372 245 8 660 324 179 0 0 chrUextra 9846963 9847041 -19157615 + (AATAG)n Simple_repeat Simple_repeat 2 79 0 8 660 2025 0 0 0 chrUextra 9848126 9848366 -19156290 - ALUII_DM Unknown Unknown 0 240 1 8 660 21 57 0 0 chrUextra 9848366 9848401 -19156255 + AT_rich Low_complexity Low_complexity 1 35 0 8 660 1679 0 0 0 chrUextra 9849566 9849768 -19154888 - QUASIMODO_LTR LTR Gypsy -455 203 2 8 660 401 103 15 0 chrUextra 9849768 9849836 -19154820 + (TA)n Simple_repeat Simple_repeat 2 70 0 8 660 276 231 0 0 chrUextra 9849912 9849990 -19154666 + (TA)n Simple_repeat Simple_repeat 2 79 0 8 660 22 0 0 0 chrUextra 9850084 9850106 -19154550 + AT_rich Low_complexity Low_complexity 1 22 0 8 660 236 253 90 50 chrUextra 9850179 9850279 -19154377 + DNAREP1_DM LINE Penelope 489 592 -2 8 660 6318 19 1 1 chrUextra 9850435 9851203 -19153453 - R1_DM LINE R1 -765 4591 3824 8 660 3076 194 15 23 chrUextra 9851307 9852064 -19152592 + SAR_DM Satellite Satellite 1 750 -208 8 660 34 24 0 0 chrUextra 9852421 9852462 -19152194 + AT_rich Low_complexity Low_complexity 1 41 0 8 660 3508 167 19 10 chrUextra 9853042 9853811 -19150845 + SAR_DM Satellite Satellite 248 1023 -449 8 660 2979 184 48 16 chrUextra 9853911 9854678 -19149978 - SAR_DM Satellite Satellite -399 1073 282 8 660 5135 21 86 1 chrUextra 9854780 9855549 -19149107 - MAX_I LTR Pao -613 7301 6468 8 660 6673 0 0 0 chrUextra 9855649 9856418 -19148238 + G_DM LINE Jockey 1067 1835 -2511 8 660 1641 10 0 0 chrUextra 9856518 9856717 -19147939 - IDEFIX_LTR LTR Gypsy -395 199 1 8 660 4254 21 9 7 chrUextra 9856717 9857287 -19147369 - IDEFIX_I LTR Gypsy 0 5628 5058 8 660 6105 3 0 33 chrUextra 9858255 9859023 -19145633 - LSU-rRNA_Dme rRNA rRNA -3031 869 127 8 660 5928 21 0 5 chrUextra 9859139 9859891 -19144765 - CIRCE LINE Composite -1376 4980 4233 8 660 6583 4 0 5 chrUextra 9859991 9860759 -19143897 - MICROPIA_I LTR Gypsy -1224 3252 2489 8 660 6159 27 0 3 chrUextra 9860859 9861627 -19143029 - R1_DM LINE R1 -2021 3335 2570 8 660 3837 22 137 0 chrUextra 9861727 9862489 -19142167 + STALKER4_I LTR Gypsy 3925 4790 -1740 8 660 5089 60 4 13 chrUextra 9862595 9863362 -19141294 + I_DM LINE I 835 1594 -4637 8 660 1453 234 36 55 chrUextra 9863465 9864224 -19140432 + SAR_DM Satellite Satellite 1 744 -396 8 660 954 0 0 0 chrUextra 9864331 9864440 -19140216 + SSU-rRNA_Dme rRNA rRNA 1887 1995 0 8 660 21 89 0 0 chrUextra 9864459 9864515 -19140141 + AT_rich Low_complexity Low_complexity 1 56 0 8 660 3402 159 23 25 chrUextra 9865199 9865967 -19138689 - SAR_DM Satellite Satellite -439 1033 267 8 660 5935 4 4 7 chrUextra 9866067 9866768 -19137888 + DM1731_I LTR Copia 3278 3976 0 8 660 553 15 0 0 chrUextra 9866768 9866835 -19137821 + DM1731_LTR LTR Copia 1 67 -269 8 660 3309 171 10 19 chrUextra 9866935 9867703 -19136953 - SAR_DM Satellite Satellite -1095 760 1 8 660 5954 14 31 0 chrUextra 9867803 9868571 -19136085 - IDEFIX_I LTR Gypsy -144 5484 4693 8 660 5152 97 30 1 chrUextra 9868671 9869437 -19135219 + R1_DM LINE R1 1169 1956 -3400 8 660 21 0 0 0 chrUextra 9869886 9869907 -19134749 + AT_rich Low_complexity Low_complexity 1 21 0 8 660 3557 24 0 0 chrUextra 9870407 9870865 -19133791 - PROTOP DNA P -221 4259 3802 8 660 1999 45 54 0 chrUextra 9870860 9871174 -19133482 - PROTOP DNA P -3657 823 493 8 660 2318 194 50 14 chrUextra 9871299 9872042 -19132614 + Gypsy8_I LTR Gypsy 1035 1404 -2943 8 660 2726 3 0 9 chrUextra 9872143 9872469 -19132187 - SSU-rRNA_Dme rRNA rRNA -1672 323 1 8 660 32 0 0 0 chrUextra 9872601 9872633 -19132023 + AT_rich Low_complexity Low_complexity 1 32 0 8 660 6594 0 3 4 chrUextra 9873011 9873779 -19130877 - SSU-rRNA_Dme rRNA rRNA -116 1879 1113 8 660 2433 3 10 0 chrUextra 9873879 9874168 -19130488 + Invader2_I LTR Gypsy 591 882 -3710 8 660 4153 8 0 0 chrUextra 9874168 9874647 -19130009 - GTWIN_LTR LTR Gypsy 0 495 17 8 660 6537 4 0 1 chrUextra 9874747 9875515 -19129141 - DOC LINE Jockey -1469 3256 2490 8 660 2442 3 0 3 chrUextra 9875615 9875903 -19128753 + QUASIMODO_LTR LTR Gypsy 372 658 0 8 660 3786 9 15 19 chrUextra 9875903 9876379 -19128277 + QUASIMODO_I LTR Gypsy 1 474 -5586 8 660 3554 10 0 0 chrUextra 9876483 9876896 -19127760 - Copia2_I LTR Copia -224 3938 3526 8 660 643 0 0 0 chrUextra 9877049 9877124 -19127532 - Copia2_LTR_DM LTR Copia -95 103 29 8 660 1063 16 0 0 chrUextra 9877124 9877251 -19127405 - Invader1_LTR LTR Gypsy 0 423 297 8 660 6624 0 0 0 chrUextra 9877351 9878119 -19126537 + DOC LINE Jockey 392 1159 -3566 8 660 335 102 17 0 chrUextra 9878219 9878278 -19126378 - ARS406_DM Unknown Unknown -221 132 73 8 660 2182 170 11 7 chrUextra 9878278 9878977 -19125679 + SAR_DM Satellite Satellite 1 702 -539 8 660 1396 25 20 20 chrUextra 9879105 9879308 -19125348 - NTS_DM Other Other 0 240 38 8 660 870 9 0 27 chrUextra 9879308 9879420 -19125236 - NTS_DM Other Other -107 133 25 8 660 1252 18 0 6 chrUextra 9879472 9879637 -19125019 - NTS_DM Other Other -39 201 38 8 660 818 18 0 35 chrUextra 9879637 9879750 -19124906 - NTS_DM Other Other -107 133 25 8 660 21 57 0 0 chrUextra 9879776 9879811 -19124845 + AT_rich Low_complexity Low_complexity 1 35 0 8 660 329 23 0 0 chrUextra 9879811 9879855 -19124801 - NTS_DM Other Other -39 201 158 8 660 2979 189 26 13 chrUextra 9879971 9880720 -19123936 + SAR_DM Satellite Satellite 1 758 -396 8 660 3843 4 0 0 chrUextra 9880823 9881283 -19123373 - DM412 LTR Gypsy -815 6082 5623 8 660 2675 9 0 3 chrUextra 9881271 9881591 -19123065 - DM412 LTR Gypsy -1845 5052 4734 8 660 1094 149 13 9 chrUextra 9881691 9881915 -19122741 + SAR_DM Satellite Satellite 376 600 -872 8 660 2057 35 3 31 chrUextra 9881915 9882209 -19122447 + BATUMI_I LTR Pao 7000 7285 -678 8 660 244 130 0 0 chrUextra 9882208 9882254 -19122402 - ARS406_DM Unknown Unknown -306 47 2 8 660 1233 163 8 0 chrUextra 9882214 9882459 -19122197 + SAR_DM Satellite Satellite 604 850 -622 8 660 2649 137 82 37 chrUextra 9882562 9883327 -19121329 + STALKER4_I LTR Gypsy 348 1195 -5335 8 660 6093 39 1 7 chrUextra 9883427 9884195 -19120461 - BATUMI_I LTR Pao -1806 6157 5394 8 660 6305 17 1 1 chrUextra 9884295 9885063 -19119593 - R1_DM LINE R1 -964 4392 3625 8 660 5215 31 5 3 chrUextra 9885165 9885820 -19118836 - R1_DM LINE R1 -294 5062 4407 8 660 699 33 0 0 chrUextra 9885840 9885931 -19118725 - R1_DM LINE R1 -1074 4282 4192 8 660 34 24 0 0 chrUextra 9886257 9886298 -19118358 + AT_rich Low_complexity Low_complexity 1 41 0 8 660 21 95 0 0 chrUextra 9886511 9886574 -19118082 + AT_rich Low_complexity Low_complexity 1 63 0 8 660 1815 0 5 0 chrUextra 9886586 9886799 -19117857 + LSU-rRNA_Dme rRNA rRNA 1 214 -3686 8 660 2405 126 80 48 chrUextra 9886992 9887516 -19117140 + Gypsy12_LTR LTR Gypsy 1796 2336 0 8 660 5587 62 7 5 chrUextra 9887767 9888535 -19116121 - IDEFIX_I LTR Gypsy -2372 3256 2488 8 660 6612 0 1 3 chrUextra 9888637 9889403 -19115253 - SSU-rRNA_Dme rRNA rRNA -393 1602 838 8 660 1301 6 0 18 chrUextra 9889541 9889706 -19114950 + NTS_DM Other Other 1 162 -78 8 660 488 119 36 0 chrUextra 9889816 9889900 -19114756 + NTS_DM Other Other 4 90 -150 8 660 28 48 0 0 chrUextra 9890174 9890216 -19114440 + AT_rich Low_complexity Low_complexity 1 42 0 8 660 5596 64 1 0 chrUextra 9891239 9892007 -19112649 - STALKER4_I LTR Gypsy -868 5662 4894 8 660 1900 0 0 5 chrUextra 9892131 9892354 -19112302 - LSU-rRNA_Dme rRNA rRNA -3678 222 1 8 660 21 95 0 0 chrUextra 9892366 9892429 -19112227 + AT_rich Low_complexity Low_complexity 1 63 0 8 660 34 24 0 0 chrUextra 9892642 9892683 -19111973 + AT_rich Low_complexity Low_complexity 1 41 0 8 660 228 78 78 0 chrUextra 9893017 9893068 -19111588 + (TA)n Simple_repeat Simple_repeat 2 56 0 8 660 25 31 0 0 chrUextra 9893697 9893729 -19110927 + AT_rich Low_complexity Low_complexity 1 32 0 8 660 3471 61 2 6 chrUextra 9893845 9894324 -19110332 + BATUMI_I LTR Pao 7487 7963 0 8 660 1574 48 4 45 chrUextra 9894331 9894573 -19110083 + BATUMI_LTR LTR Pao 41 272 0 8 660 314 0 0 0 chrUextra 9894573 9894610 -19110046 - Invader2_LTR LTR Gypsy -211 55 19 8 660 3026 179 18 26 chrUextra 9894714 9895477 -19109179 - SAR_DM Satellite Satellite -291 1181 425 8 660 1150 92 7 3 chrUextra 9895618 9895903 -19108753 + (CAATA)n Simple_repeat Simple_repeat 1 286 0 8 660 6418 12 0 0 chrUextra 9896447 9897215 -19107441 + STALKER4_I LTR Gypsy 1483 2250 -4280 8 660 4013 101 71 0 chrUextra 9897315 9897967 -19106689 - Invader1_I LTR Gypsy -591 2595 1898 8 660 751 52 233 0 chrUextra 9897967 9898083 -19106573 + PROTOP_B DNA P 1 143 -1010 8 660 3220 3 5 0 chrUextra 9898183 9898558 -19106098 + ROO_LTR LTR Pao 52 428 0 8 660 3365 0 2 0 chrUextra 9898558 9898951 -19105705 + ROO_I LTR Pao 1 394 -7862 8 660 990 41 0 0 chrUextra 9899051 9899174 -19105482 - DMRT1B LINE R1 -5060 123 1 8 660 4163 2 2 0 chrUextra 9899334 9899815 -19104841 - DM412B_LTR LTR Gypsy -89 482 1 8 660 6161 1 26 1 chrUextra 9899919 9900687 -19103969 - ROO_I LTR Pao -7194 1062 276 8 660 360 0 0 0 chrUextra 9900929 9900969 -19103687 + (TAA)n Simple_repeat Simple_repeat 3 42 0 8 660 417 95 0 0 chrUextra 9901124 9901187 -19103469 + (CA)n Simple_repeat Simple_repeat 1 63 0 8 660 4466 4 2 0 chrUextra 9902523 9903047 -19101609 - R1_DM LINE R1 -1561 3795 3271 8 660 2181 0 0 0 chrUextra 9903044 9903291 -19101365 - LSU-rRNA_Dme rRNA rRNA -1250 2650 2404 8 660 21 89 0 0 chrUextra 9903398 9903454 -19101202 + AT_rich Low_complexity Low_complexity 1 56 0 8 660 5949 1 3 0 chrUextra 9903473 9904159 -19100497 - SSU-rRNA_Dme rRNA rRNA 0 1995 1308 8 660 5000 17 61 0 chrUextra 9904386 9905027 -19099629 + PROTOP_A DNA P 1 680 -425 8 660 21 57 0 0 chrUextra 9905698 9905733 -19098923 + AT_rich Low_complexity Low_complexity 1 35 0 8 660 6562 3 0 0 chrUextra 9905995 9906763 -19097893 - FW_DM LINE Jockey -3721 971 204 8 660 5568 44 25 14 chrUextra 9906863 9907631 -19097025 - R1_DM LINE R1 -4187 1169 394 8 660 22 35 0 0 chrUextra 9907807 9907836 -19096820 + AT_rich Low_complexity Low_complexity 1 29 0 8 660 37 39 0 0 chrUextra 9907918 9907969 -19096687 + AT_rich Low_complexity Low_complexity 1 51 0 8 660 28 48 0 0 chrUextra 9908324 9908366 -19096290 + AT_rich Low_complexity Low_complexity 1 42 0 8 660 6619 3 1 0 chrUextra 9908599 9909367 -19095289 + FW_DM LINE Jockey 3721 4489 -203 8 660 6050 39 1 0 chrUextra 9910335 9911103 -19093553 - IDEFIX_I LTR Gypsy -3712 1916 1148 8 660 2739 194 18 29 chrUextra 9911205 9911970 -19092686 - SAR_DM Satellite Satellite -291 1181 425 8 660 1692 5 0 0 chrUextra 9912071 9912275 -19092381 - NTS_DM Other Other -36 204 1 8 660 1734 21 17 17 chrUextra 9912275 9912515 -19092141 - NTS_DM Other Other 0 240 1 8 660 1756 17 17 17 chrUextra 9912515 9912755 -19091901 - NTS_DM Other Other 0 240 1 8 660 536 12 48 36 chrUextra 9912755 9912838 -19091818 - NTS_DM Other Other 0 240 157 8 660 3462 107 75 68 chrUextra 9912981 9913703 -19090953 - HETA LINE telomeric -4944 1137 411 8 660 5076 7 0 0 chrUextra 9913807 9914406 -19090250 + G2_DM LINE Jockey 2501 3099 -3 8 660 772 0 0 0 chrUextra 9914487 9914575 -19090081 + SSU-rRNA_Dme rRNA rRNA 1 88 -1907 8 660 2520 16 128 0 chrUextra 9914675 9915104 -19089552 + R1_DM LINE R1 4873 5356 0 8 660 2177 63 7 0 chrUextra 9915137 9915436 -19089220 + R1_DM LINE R1 1 301 -5055 8 660 3512 14 0 0 chrUextra 9915543 9915961 -19088695 + R1_DM LINE R1 3242 3659 -1697 8 660 2786 34 3 0 chrUextra 9915959 9916311 -19088345 + R1_DM LINE R1 4833 5185 -171 8 660 5621 1 0 1 chrUextra 9916411 9917066 -19087590 + Copia_I LTR Copia 3940 4593 0 8 660 938 0 0 0 chrUextra 9917066 9917179 -19087477 + Copia_LTR LTR Copia 1 113 -163 8 660 3986 73 5 9 chrUextra 9917279 9917848 -19086808 - R1_DM LINE R1 -4767 589 23 8 660 1488 22 0 0 chrUextra 9917869 9918047 -19086609 - R1_DM LINE R1 0 5356 5179 8 660 6543 0 1 0 chrUextra 9918147 9918915 -19085741 + LSU-rRNA_Dme rRNA rRNA 411 1179 -2721 8 660 991 16 16 0 chrUextra 9919015 9919141 -19085515 + ROO_LTR LTR Pao 301 428 0 8 660 5341 0 26 0 chrUextra 9919141 9919783 -19084873 + ROO_I LTR Pao 1 659 -7597 8 660 2545 188 5 3 chrUextra 9919883 9920651 -19084005 + SAR_DM Satellite Satellite 1 769 -545 8 660 26 0 0 0 chrUextra 9920768 9920794 -19083862 + AT_rich Low_complexity Low_complexity 1 26 0 8 660 2368 154 59 110 chrUextra 9920818 9921518 -19083138 - HOBO DNA hAT 0 3016 2353 8 660 6493 14 0 0 chrUextra 9921618 9922385 -19082271 - DMRT1B LINE R1 -2565 2618 1852 8 660 4491 69 53 22 chrUextra 9922485 9923252 -19081404 + STALKER4_I LTR Gypsy 800 1590 -4940 8 660 1112 28 7 0 chrUextra 9923352 9923496 -19081160 - QUASIMODO_I LTR Gypsy -4095 1965 1821 8 660 4022 69 3 13 chrUextra 9923505 9924118 -19080538 - QUASIMODO_I LTR Gypsy -4450 1610 1004 8 660 2423 126 10 5 chrUextra 9924221 9924882 -19079774 + Gypsy3_I LTR Gypsy 5648 6177 0 8 660 492 25 0 221 chrUextra 9924882 9924986 -19079670 + Gypsy3_LTR LTR Gypsy 1 81 -317 8 660 6540 1 1 0 chrUextra 9925086 9925853 -19078803 + FW_DM LINE Jockey 2660 3427 -1265 8 660 6413 13 1 0 chrUextra 9925953 9926720 -19077936 - Copia2_I LTR Copia -2392 1770 1003 8 660 4482 96 22 1 chrUextra 9926900 9927587 -19077069 + DMRT1C LINE R1 2635 3335 -2108 8 660 23 68 0 0 chrUextra 9928044 9928088 -19076568 + AT_rich Low_complexity Low_complexity 1 44 0 8 660 27 81 0 0 chrUextra 9928134 9928196 -19076460 + AT_rich Low_complexity Low_complexity 1 62 0 8 660 245 125 46 15 chrUextra 9928873 9928938 -19075718 + (TAA)n Simple_repeat Simple_repeat 2 68 0 8 660 22 35 0 0 chrUextra 9929132 9929161 -19075495 + AT_rich Low_complexity Low_complexity 1 29 0 8 660 783 107 53 0 chrUextra 9930019 9930188 -19074468 + CT-rich Low_complexity Low_complexity 2 179 0 8 660 268 291 131 13 chrUextra 9930439 9930592 -19074064 + MICROPIA_I LTR Gypsy 3668 3838 -638 8 660 460 176 392 0 chrUextra 9930732 9930941 -19073715 - PROTOP DNA P -232 4248 3959 8 660 228 122 24 0 chrUextra 9930940 9930981 -19073675 - PROTOP DNA P -3565 915 874 8 660 2694 196 68 10 chrUextra 9931155 9931917 -19072739 - SAR_DM Satellite Satellite -589 806 1 8 660 2684 117 115 0 chrUextra 9932023 9932618 -19072038 + TART_B1 LINE telomeric 983 1632 -9022 8 660 1436 23 0 0 chrUextra 9932618 9932789 -19071867 - PROTOP DNA P 0 4480 4310 8 660 2402 183 21 10 chrUextra 9932910 9933485 -19071171 - SAR_DM Satellite Satellite -396 1076 496 8 660 650 63 53 0 chrUextra 9933490 9933585 -19071071 + ARS406_DM Unknown Unknown 90 189 -164 8 660 727 149 39 13 chrUextra 9933500 9933656 -19071000 - SAR_DM Satellite Satellite -569 903 744 8 660 1925 0 0 0 chrUextra 9933756 9933987 -19070669 + Copia_LTR LTR Copia 46 276 0 8 660 21 0 0 0 chrUextra 9934011 9934032 -19070624 + AT_rich Low_complexity Low_complexity 1 21 0 8 660 185 0 40 0 chrUextra 9934354 9934379 -19070277 + (CATAT)n Simple_repeat Simple_repeat 5 30 0 8 660 445 66 16 0 chrUextra 9934427 9934488 -19070168 + ROVER-LTR_DM LTR Gypsy 185 246 -121 8 660 237 164 0 32 chrUextra 9934623 9934686 -19069970 + XDMR_DM Unknown Unknown 300 360 0 8 660 2469 189 5 7 chrUextra 9934651 9935233 -19069423 - SAR_DM Satellite Satellite -396 1076 496 8 660 766 50 0 0 chrUextra 9935238 9935338 -19069318 + ARS406_DM Unknown Unknown 90 189 -164 8 660 763 136 0 14 chrUextra 9935248 9935390 -19069266 - SAR_DM Satellite Satellite -569 903 764 8 660 3089 11 3 0 chrUextra 9935490 9935857 -19068799 + DM412B_LTR LTR Gypsy 204 571 0 8 660 1174 14 0 7 chrUextra 9935857 9935990 -19068666 + DM412B_LTR LTR Gypsy 311 442 -6455 8 660 1517 16 5 5 chrUextra 9935980 9936174 -19068482 + DM412B_LTR LTR Gypsy 687 880 -6017 8 660 564 49 0 12 chrUextra 9936175 9936257 -19068399 + DM412 LTR Gypsy 820 900 -5997 8 660 306 0 0 0 chrUextra 9937090 9937124 -19067532 + (GAGAA)n Simple_repeat Simple_repeat 4 37 0 8 660 3333 22 17 9 chrUextra 9937224 9937643 -19067013 - Transib5 DNA Transib -1618 1383 962 8 660 2551 51 9 0 chrUextra 9937642 9937974 -19066682 + DMRT1A LINE R1 4837 5171 -12 8 660 775 278 53 35 chrUextra 9938091 9938598 -19066058 + QUASIMODO_I LTR Gypsy 1170 1729 -4331 8 660 612 124 0 0 chrUextra 9938958 9939063 -19065593 - ARS406_DM Unknown Unknown -248 105 1 8 660 3098 189 9 7 chrUextra 9938970 9939711 -19064945 + SAR_DM Satellite Satellite 195 937 -535 8 660 853 81 7 0 chrUextra 9939589 9939725 -19064931 - ARS406_DM Unknown Unknown -164 189 53 8 660 1628 39 5 0 chrUextra 9940386 9940592 -19064064 - DIVER2_LTR LTR Pao 0 385 179 8 660 6097 3 0 33 chrUextra 9940692 9941459 -19063197 + LSU-rRNA_Dme rRNA rRNA 143 884 -3016 8 660 1346 217 58 44 chrUextra 9941561 9942322 -19062334 - SAR_DM Satellite Satellite -224 1248 496 8 660 1433 0 0 0 chrUextra 9942426 9942594 -19062062 - Copia_LTR LTR Copia -108 168 1 8 660 1238 35 4 127 chrUextra 9943295 9943520 -19061136 - BATUMI_I LTR Pao -765 7198 7002 8 660 2357 0 0 7 chrUextra 9943520 9943802 -19060854 - BATUMI_I LTR Pao 0 7963 7684 8 660 1871 28 12 12 chrUextra 9943806 9944060 -19060596 + BATUMI_I LTR Pao 6497 6750 -1213 8 660 1147 53 0 0 chrUextra 9944160 9944311 -19060345 + DM1731_LTR LTR Copia 186 336 0 8 660 5277 7 2 0 chrUextra 9944311 9944927 -19059729 + DM1731_I LTR Copia 1 617 -3359 8 660 47 0 0 0 chrUextra 9945089 9945136 -19059520 + AT_rich Low_complexity Low_complexity 1 47 0 8 660 1777 14 0 0 chrUextra 9945152 9945364 -19059292 - STALKER4_LTR LTR Gypsy -190 212 1 8 660 3159 12 53 0 chrUextra 9945364 9945794 -19058862 - STALKER4_I LTR Gypsy 0 6530 6078 8 660 6392 18 1 0 chrUextra 9945894 9946661 -19057995 - R1_DM LINE R1 -2981 2375 1608 8 660 3152 183 17 26 chrUextra 9946763 9947505 -19057151 + SAR_DM Satellite Satellite 1 735 -227 8 660 2505 185 52 16 chrUextra 9947629 9948395 -19056261 + SAR_DM Satellite Satellite 1 793 -208 8 660 3208 172 14 24 chrUextra 9948497 9949254 -19055402 - SAR_DM Satellite Satellite -354 1118 369 8 660 6654 1 4 0 chrUextra 9949362 9950129 -19054527 - LSU-rRNA_Dme rRNA rRNA -240 3660 2891 8 660 4690 11 0 0 chrUextra 9950229 9950779 -19053877 + R1_DM LINE R1 4364 4913 -443 8 660 1936 0 0 0 chrUextra 9950777 9950996 -19053660 - LSU-rRNA_Dme rRNA rRNA -1245 2655 2437 8 660 2384 95 7 46 chrUextra 9951096 9951863 -19052793 - DMSAT6 Satellite Satellite -108 736 1 8 660 403 88 179 8 chrUextra 9952104 9952232 -19052424 - TART LINE telomeric -3998 10479 10370 8 660 640 193 39 48 chrUextra 9952311 9952518 -19052138 + Gypsy3_LTR LTR Gypsy 31 235 -163 8 660 1297 12 0 0 chrUextra 9952830 9952992 -19051664 + TART LINE telomeric 7876 8037 -6440 8 660 3840 57 150 16 chrUextra 9952992 9953597 -19051059 + TART LINE telomeric 6797 7482 -6995 8 660 4304 145 13 3 chrUextra 9953697 9954460 -19050196 - HETA LINE telomeric -3941 2140 1370 8 660 6555 1 3 0 chrUextra 9954564 9955331 -19049325 + DOC LINE Jockey 2836 3604 -1121 8 660 5421 50 73 11 chrUextra 9955433 9956198 -19048458 + R1_DM LINE R1 148 960 -4396 8 660 6677 0 0 0 chrUextra 9956298 9957065 -19047591 + FW_DM LINE Jockey 1945 2711 -1981 8 660 1142 0 7 0 chrUextra 9957165 9957303 -19047353 + R1_DM LINE R1 4928 5066 -290 8 660 904 53 0 0 chrUextra 9957300 9957414 -19047242 + R1_DM LINE R1 5243 5356 0 8 660 3431 69 8 6 chrUextra 9957449 9957932 -19046724 + R1_DM LINE R1 3 486 -4870 8 660 6224 24 10 0 chrUextra 9958032 9958799 -19045857 - R1_DM LINE R1 -1723 3633 2859 8 660 6279 25 1 0 chrUextra 9958899 9959666 -19044990 - HETA LINE telomeric -3164 2917 2150 8 660 5381 55 29 3 chrUextra 9959766 9960533 -19044123 - DM297_I LTR Gypsy -1830 4337 3551 8 660 5063 44 72 35 chrUextra 9960633 9961393 -19043263 + TRANSIB2 DNA Transib 1433 2220 -624 8 661 3846 0 0 0 chrUextra 9961500 9961939 -19042717 + LSU-rRNA_Dme rRNA rRNA 722 1160 -2740 8 661 2823 9 0 0 chrUextra 9961939 9962267 -19042389 + TRANSPAC_LTR LTR Gypsy 1 328 -2 8 661 21 89 0 0 chrUextra 9962646 9962702 -19041954 + AT_rich Low_complexity Low_complexity 1 56 0 8 661 3595 2 2 0 chrUextra 9962721 9963134 -19041522 - SSU-rRNA_Dme rRNA rRNA 0 1995 1582 8 661 1231 173 18 0 chrUextra 9963251 9963476 -19041180 - DMRT1B LINE R1 -987 4196 3968 8 661 3773 49 0 8 chrUextra 9963479 9963997 -19040659 + TRANSIB2 DNA Transib 10 523 -2321 8 661 693 103 241 0 chrUextra 9964390 9964535 -19040121 + FB4_DM DNA Tc1 3 182 -3907 8 661 250 33 0 0 chrUextra 9964543 9964573 -19040083 - Baggins1 LINE LOA -697 4756 4727 8 661 27 29 0 0 chrUextra 9964812 9964846 -19039810 + AT_rich Low_complexity Low_complexity 1 34 0 8 661 2270 4 0 0 chrUextra 9964968 9965237 -19039419 - ACCORD_LTR LTR Gypsy -289 269 1 8 661 3024 44 24 93 chrUextra 9965237 9965734 -19038922 - NINJA_I LTR Pao -5342 669 207 8 661 2333 82 0 24 chrUextra 9965835 9966172 -19038484 - Gypsy12_I LTR Gypsy -561 4985 4657 8 661 1080 21 107 0 chrUextra 9966170 9966310 -19038346 - PROTOP_B DNA P -998 155 1 8 661 3419 162 16 21 chrUextra 9966703 9967466 -19037190 + SAR_DM Satellite Satellite 332 1090 -382 8 661 6557 13 0 0 chrUextra 9967569 9968332 -19036324 + R2_DM LINE R2 1909 2671 -936 8 661 3066 185 21 9 chrUextra 9968440 9969203 -19035453 + SAR_DM Satellite Satellite 246 1017 -455 8 661 2744 15 0 0 chrUextra 9969303 9969627 -19035029 - PROTOP_A DNA P -781 324 1 8 661 6362 7 0 0 chrUextra 9970170 9970935 -19033721 + STALKER4_I LTR Gypsy 3093 3857 -2673 8 661 23 0 0 0 chrUextra 9971558 9971581 -19033075 + AT_rich Low_complexity Low_complexity 1 23 0 8 661 6617 1 0 0 chrUextra 9971904 9972671 -19031985 + FW_DM LINE Jockey 2079 2845 -1847 8 661 1114 134 64 5 chrUextra 9973276 9973478 -19031178 - DNAREP1_DM LINE Penelope -358 236 23 8 661 3185 170 26 22 chrUextra 9973640 9974404 -19030252 - SAR_DM Satellite Satellite -354 1118 352 8 661 599 43 0 132 chrUextra 9974505 9974611 -19030045 + Baggins1 LINE LOA 5362 5453 0 8 661 1506 74 5 0 chrUextra 9975056 9975272 -19029384 + Baggins1 LINE LOA 4791 5007 -446 8 661 6386 21 0 0 chrUextra 9975372 9976139 -19028517 + ACCORD2_I LTR Gypsy 4430 5196 -2016 8 661 2999 187 36 9 chrUextra 9976241 9977001 -19027655 - SAR_DM Satellite Satellite -1061 780 1 8 661 3293 176 12 9 chrUextra 9977107 9977873 -19026783 + SAR_DM Satellite Satellite 287 1054 -418 8 661 4588 21 2 2 chrUextra 9978180 9978740 -19025916 + PROTOP DNA P 1 560 -3920 8 661 3323 176 10 10 chrUextra 9978840 9979607 -19025049 + SAR_DM Satellite Satellite 256 1022 -450 8 661 5504 0 3 0 chrUextra 9979707 9980346 -19024310 + IVK_DM LINE I 4762 5402 0 8 661 1131 8 0 0 chrUextra 9980346 9980474 -19024182 + (TTA)n Simple_repeat Simple_repeat 1 128 0 8 661 749 0 35 26 chrUextra 9980574 9980687 -19023969 + NTS_DM Other Other 126 239 -1 8 661 1825 8 17 13 chrUextra 9980688 9980927 -19023729 + NTS_DM Other Other 1 240 0 8 661 1693 30 17 17 chrUextra 9980927 9981167 -19023489 + NTS_DM Other Other 1 240 0 8 661 1319 6 0 17 chrUextra 9981167 9981341 -19023315 + NTS_DM Other Other 1 171 -69 8 661 726 117 0 0 chrUextra 9981441 9981552 -19023104 + (TA)n Simple_repeat Simple_repeat 2 112 0 8 661 4212 12 0 2 chrUextra 9981555 9982062 -19022594 + DM176_LTR LTR Gypsy 2 507 0 8 661 1081 15 0 0 chrUextra 9982073 9982208 -19022448 + DM176_LTR LTR Gypsy 1 135 -372 8 661 1714 0 0 0 chrUextra 9982308 9982506 -19022150 - LSU-rRNA_Dme rRNA rRNA -3702 198 1 8 661 21 95 0 0 chrUextra 9982518 9982581 -19022075 + AT_rich Low_complexity Low_complexity 1 63 0 8 661 34 24 0 0 chrUextra 9982794 9982835 -19021821 + AT_rich Low_complexity Low_complexity 1 41 0 8 661 2650 55 0 3 chrUextra 9983595 9983942 -19020714 + DIVER2_I LTR Pao 901 1246 -2901 8 661 6108 36 16 0 chrUextra 9984042 9984809 -19019847 - R1_DM LINE R1 -3342 2014 1236 8 661 2954 178 20 24 chrUextra 9984909 9985657 -19018999 + SAR_DM Satellite Satellite 415 1159 -313 8 661 276 338 0 0 chrUextra 9985831 9985982 -19018674 + GA-rich Low_complexity Low_complexity 4 154 0 8 661 296 329 0 0 chrUextra 9985994 9986070 -19018586 + polypurine Low_complexity Low_complexity 4 79 0 8 661 629 181 3 33 chrUextra 9986070 9986443 -19018213 + GA-rich Low_complexity Low_complexity 1 361 0 8 661 5687 45 0 4 chrUextra 9986643 9987410 -19017246 + IDEFIX_I LTR Gypsy 3206 3969 -1659 8 661 757 21 0 0 chrUextra 9987510 9987604 -19017052 + QUASIMODO_I LTR Gypsy 4234 4327 -1733 8 661 5781 1 0 0 chrUextra 9987603 9988277 -19016379 + QUASIMODO_I LTR Gypsy 426 1099 -4961 8 661 721 125 8 0 chrUextra 9988377 9988505 -19016151 - ARS406_DM Unknown Unknown -224 129 1 8 661 3087 186 14 9 chrUextra 9988409 9989144 -19015512 + SAR_DM Satellite Satellite 192 929 -543 8 661 3368 176 8 9 chrUextra 9989244 9990010 -19014646 - SAR_DM Satellite Satellite -484 988 224 8 661 6079 8 37 0 chrUextra 9990111 9990877 -19013779 + DM176_I LTR Gypsy 1269 2062 -4358 8 661 831 250 86 25 chrUextra 9990977 9991338 -19013318 + TAHRE LINE telomeric 9707 10089 -374 8 661 551 140 18 0 chrUextra 9991338 9991452 -19013204 + HETA LINE telomeric 5795 5910 -171 8 661 28 0 0 0 chrUextra 9991475 9991503 -19013153 + AT_rich Low_complexity Low_complexity 1 28 0 8 661 24 0 0 0 chrUextra 9992536 9992560 -19012096 + AT_rich Low_complexity Low_complexity 1 24 0 8 661 6562 1 0 0 chrUextra 9992709 9993475 -19011181 + ROO_I LTR Pao 1348 2113 -6143 8 661 6153 22 4 5 chrUextra 9993575 9994341 -19010315 - FW_DM LINE Jockey -662 4030 3266 8 661 6596 9 0 0 chrUextra 9994441 9995207 -19009449 - Gypsy6_I LTR Gypsy -2986 4026 3261 8 661 2876 185 47 22 chrUextra 9995307 9996069 -19008587 - TART LINE telomeric -4753 9724 8944 8 661 33 112 0 0 chrUextra 9996781 9996933 -19007723 + AT_rich Low_complexity Low_complexity 1 152 0 8 661 5461 63 18 3 chrUextra 9997039 9997804 -19006852 + QUASIMODO_I LTR Gypsy 125 901 -5159 8 661 1300 58 5 50 chrUextra 9997980 9998180 -19006476 + ROVER-LTR_DM LTR Gypsy 177 367 0 8 661 2939 0 2 149 chrUextra 9998180 9998669 -19005987 + ROVER-I_DM LTR Gypsy 1 417 -6167 8 661 6481 0 4 0 chrUextra 9998773 9999537 -19005119 + DOC LINE Jockey 1060 1826 -2899 8 661 207 0 0 0 chrUextra 9999890 9999913 -19004743 + (T)n Simple_repeat Simple_repeat 1 23 0 8 661 605 0 0 46 chrUextra 9999913 10000000 -19004656 - LINEJ1_DM LINE Jockey 0 5020 4938 8 661 2282 0 0 4 chrUextra 10000000 10000270 -19004386 - LINEJ1_DM LINE Jockey -83 4937 4669 8 661 519 16 0 0 chrUextra 10000503 10000565 -19004091 + CIRCE LINE Composite 4919 4980 -1376 8 661 3966 39 8 2 chrUextra 10000757 10001269 -19003387 - R1_DM LINE R1 -4037 1319 805 8 661 795 89 59 0 chrUextra 10002236 10002371 -19002285 + ARS406_DM Unknown Unknown 2 144 -209 8 661 3313 246 11 34 chrUextra 10002376 10003865 -19000791 - SAR_DM Satellite Satellite -514 1455 1 8 661 6342 3 0 18 chrUextra 10003967 10004733 -18999923 - QUASIMODO_I LTR Gypsy -5016 1044 293 8 661 3039 3 0 3 chrUextra 10006565 10006920 -18997736 - LSU-rRNA_Dme rRNA rRNA -907 2993 2640 8 661 3585 2 0 0 chrUextra 10006918 10007331 -18997325 - R1_DM LINE R1 0 5356 4944 8 661 6431 13 1 0 chrUextra 10007431 10008197 -18996459 - Gypsy6_I LTR Gypsy -4813 2199 1433 8 661 2042 162 19 8 chrUextra 10008301 10009063 -18995593 + SAR_DM Satellite Satellite 1 770 -476 8 661 1314 85 0 0 chrUextra 10009607 10009926 -18994730 + (CTTAT)n Simple_repeat Simple_repeat 1 319 0 8 661 5992 26 29 0 chrUextra 10010029 10010795 -18993861 - MDG1_I LTR Gypsy -3581 3015 2228 8 661 6497 3 3 1 chrUextra 10010895 10011661 -18992995 + LSU-rRNA_Dme rRNA rRNA 574 1340 -2560 8 661 600 203 21 14 chrUextra 10011763 10011903 -18992753 + HETRP_DM Satellite Satellite 1529 1669 -203 8 661 3666 2 2 0 chrUextra 10011920 10012342 -18992314 - Invader1_LTR LTR Gypsy 0 423 1 8 661 1446 5 11 5 chrUextra 10012342 10012527 -18992129 - Invader1_I LTR Gypsy 0 3186 3001 8 661 1114 13 0 0 chrUextra 10012627 10012778 -18991878 + FW_DM LINE Jockey 4542 4692 0 8 661 801 68 0 0 chrUextra 10012780 10012897 -18991759 + ARS406_DM Unknown Unknown 42 158 -195 8 661 2274 156 29 14 chrUextra 10012904 10013393 -18991263 - SAR_DM Satellite Satellite -569 903 408 8 661 3238 174 16 21 chrUextra 10014360 10015124 -18989532 - SAR_DM Satellite Satellite -361 1111 352 8 661 2823 193 35 31 chrUextra 10015225 10015989 -18988667 + SAR_DM Satellite Satellite 415 1181 -291 8 661 6456 7 3 7 chrUextra 10016091 10016857 -18987799 + CIRCE LINE Composite 1830 2592 -3764 8 661 2321 21 0 0 chrUextra 10016957 10017241 -18987415 - DMRT1A LINE R1 -2455 2728 2445 8 661 1569 80 0 49 chrUextra 10017254 10017518 -18987138 - Gypsy7_LTR LTR Gypsy 0 251 1 8 661 723 85 0 28 chrUextra 10017518 10017627 -18987029 - Gypsy7_I LTR Gypsy 0 4984 4879 8 661 4797 0 0 2 chrUextra 10017823 10018378 -18986278 - R1_DM LINE R1 -3 5353 4800 8 661 1792 0 0 0 chrUextra 10018385 10018589 -18986067 - R1_DM LINE R1 0 5356 5153 8 661 3429 2 0 7 chrUextra 10018689 10019107 -18985549 - DOC LINE Jockey -2670 2055 1641 8 661 2275 36 72 0 chrUextra 10019111 10019233 -18985423 - Stalker3_LTR LTR Gypsy -26 346 225 8 661 207 0 0 0 chrUextra 10019233 10019256 -18985400 + (CTTAT)n Simple_repeat Simple_repeat 2 24 0 8 661 2275 36 72 0 chrUextra 10019256 10019437 -18985219 - Stalker3_LTR LTR Gypsy -148 224 22 8 661 5778 29 90 0 chrUextra 10019555 10020321 -18984335 + R1_DM LINE R1 2598 3432 -1924 8 661 34 24 0 0 chrUextra 10021060 10021101 -18983555 + AT_rich Low_complexity Low_complexity 1 41 0 8 661 3656 201 0 3 chrUextra 10021288 10022053 -18982603 + ROVER-I_DM LTR Gypsy 3011 3773 -2811 8 661 6509 8 10 1 chrUextra 10022153 10022919 -18981737 + DM1731_I LTR Copia 970 1742 -2234 8 661 21 0 0 0 chrUextra 10023189 10023210 -18981446 + AT_rich Low_complexity Low_complexity 1 21 0 8 661 2506 79 9 42 chrUextra 10023886 10024651 -18980005 - DMSAT6 Satellite Satellite -43 739 1 8 661 35 24 0 0 chrUextra 10024930 10024972 -18979684 + AT_rich Low_complexity Low_complexity 1 42 0 8 661 352 0 42 0 chrUextra 10025191 10025239 -18979417 + (TA)n Simple_repeat Simple_repeat 2 51 0 8 661 1510 6 0 6 chrUextra 10025336 10025517 -18979139 + SSU-rRNA_Dme rRNA rRNA 1 180 -1815 8 661 3214 184 32 13 chrUextra 10025617 10026374 -18978282 + SAR_DM Satellite Satellite 1 771 -208 8 661 6553 1 3 0 chrUextra 10027349 10028114 -18976542 + DOC LINE Jockey 1729 2495 -2230 8 661 2267 120 38 31 chrUextra 10028215 10028978 -18975678 + DMSAT6 Satellite Satellite 1 767 -69 8 661 995 0 0 0 chrUextra 10029082 10029197 -18975459 - NTS_DM Other Other -125 115 1 8 661 1847 4 17 13 chrUextra 10029197 10029436 -18975220 - NTS_DM Other Other 0 240 1 8 661 1861 0 17 13 chrUextra 10029436 10029675 -18974981 - NTS_DM Other Other 0 240 1 8 661 1183 12 23 17 chrUextra 10029675 10029847 -18974809 - NTS_DM Other Other 0 240 68 8 661 390 21 0 0 chrUextra 10029948 10029995 -18974661 + (TC)n Simple_repeat Simple_repeat 2 48 0 8 661 681 179 7 14 chrUextra 10030125 10030267 -18974389 - HETRP_DM Satellite Satellite -203 1669 1529 8 661 468 209 8 17 chrUextra 10030434 10030551 -18974105 - HETRP_DM Satellite Satellite -208 1664 1549 8 661 276 30 0 0 chrUextra 10030551 10030584 -18974072 + (TC)n Simple_repeat Simple_repeat 2 34 0 8 661 6169 21 5 7 chrUextra 10030813 10031579 -18973077 - R1_DM LINE R1 -296 5060 4296 8 661 5365 58 60 11 chrUextra 10031681 10032445 -18972211 + R1_DM LINE R1 60 861 -4495 8 661 768 267 94 29 chrUextra 10032561 10033040 -18971616 + QUASIMODO_I LTR Gypsy 5551 6060 0 8 661 1573 50 4 31 chrUextra 10033411 10033638 -18971018 + BATUMI_LTR LTR Pao 52 272 0 8 661 807 11 0 0 chrUextra 10033638 10033730 -18970926 + (TTA)n Simple_repeat Simple_repeat 3 94 0 8 661 540 124 25 61 chrUextra 10033747 10033910 -18970746 - MDG1_I LTR Gypsy 0 6596 6440 8 661 1706 50 15 4 chrUextra 10033910 10034173 -18970483 - MDG1_I LTR Gypsy -299 6297 6032 8 661 2689 145 33 112 chrUextra 10034277 10035039 -18969617 + Gypsy12A_LTR LTR Gypsy 1510 2211 -69 8 661 4338 80 65 21 chrUextra 10035143 10035909 -18968747 + STALKER4_I LTR Gypsy 616 1415 -5115 8 661 6177 3 65 0 chrUextra 10036016 10036775 -18967881 - LSU-rRNA_Dme rRNA rRNA -1268 2632 1825 8 661 2289 103 16 30 chrUextra 10037741 10038507 -18966149 + DMSAT6 Satellite Satellite 1 754 -37 8 661 6573 3 0 1 chrUextra 10038607 10039373 -18965283 - FW_DM LINE Jockey -807 3885 3121 8 661 428 119 24 0 chrUextra 10039483 10039567 -18965089 + SAR_DM Satellite Satellite 337 422 -1050 8 661 1324 154 37 0 chrUextra 10039579 10039851 -18964805 + SAR_DM Satellite Satellite 533 814 -658 8 661 565 129 13 28 chrUextra 10039887 10040062 -18964594 + FB4_DM DNA Tc1 2887 3070 -1019 8 661 708 188 34 0 chrUextra 10040060 10040236 -18964420 + SAR_DM Satellite Satellite 585 766 -706 8 661 2684 160 9 9 chrUextra 10040346 10041105 -18963551 + SAR_DM Satellite Satellite 1 759 -542 8 661 485 285 185 32 chrUextra 10041374 10041945 -18962711 + BLOOD_I LTR Gypsy 1822 2441 -4172 8 661 6610 5 0 0 chrUextra 10042071 10042837 -18961819 - ROO_I LTR Pao -497 7759 6994 8 661 4203 2 0 2 chrUextra 10042937 10043424 -18961232 - LSU-rRNA_Dme rRNA rRNA -775 3125 2640 8 661 2427 7 0 0 chrUextra 10043422 10043703 -18960953 - R1_DM LINE R1 0 5356 5076 8 661 2717 197 37 18 chrUextra 10043804 10044569 -18960087 + SAR_DM Satellite Satellite 452 1230 -242 8 661 4738 19 0 0 chrUextra 10044673 10045240 -18959416 - R1_DM LINE R1 -1664 3692 3126 8 661 1688 0 0 0 chrUextra 10045240 10045435 -18959221 - ACCORD_LTR LTR Gypsy 0 558 364 8 661 4202 14 2 0 chrUextra 10045556 10046062 -18958594 - DM176_LTR LTR Gypsy 0 507 1 8 661 1023 26 75 50 chrUextra 10046062 10046203 -18958453 + STALKER4_LTR LTR Gypsy 258 402 0 8 661 330 25 0 0 chrUextra 10046203 10046230 -18958426 + STALKER4_I LTR Gypsy 1 27 -6503 8 661 289 96 0 37 chrUextra 10046230 10046284 -18958372 + Stalker2_I LTR Gypsy 1 52 -7350 8 661 6592 8 0 0 chrUextra 10046401 10047167 -18957489 + DOC LINE Jockey 3050 3815 -910 8 661 616 106 10 0 chrUextra 10047267 10047371 -18957285 - ARS406_DM Unknown Unknown -248 105 1 8 661 3100 172 16 15 chrUextra 10047279 10048024 -18956632 + SAR_DM Satellite Satellite 195 940 -532 8 661 21 95 0 0 chrUextra 10048232 10048295 -18956361 + AT_rich Low_complexity Low_complexity 1 63 0 8 661 4594 2 0 46 chrUextra 10048307 10048899 -18955757 + LSU-rRNA_Dme rRNA rRNA 1 565 -3335 8 661 359 138 92 0 chrUextra 10049051 10049116 -18955540 - G3_DM LINE Jockey -4026 579 509 8 661 470 138 0 11 chrUextra 10049211 10049299 -18955357 - G3_DM LINE Jockey -4416 189 103 8 661 819 123 8 18 chrUextra 10049865 10050609 -18954047 + RSP Satellite Satellite 1 736 0 8 661 2128 231 2 2 chrUextra 10050731 10051239 -18953417 - ROVER-I_DM LTR Gypsy -4021 2563 2056 8 661 491 308 8 8 chrUextra 10051243 10051495 -18953161 - ROVER-I_DM LTR Gypsy -4949 1635 1384 8 661 6100 32 1 0 chrUextra 10051597 10052351 -18952305 - FW_DM LINE Jockey -3937 755 1 8 661 6510 12 0 0 chrUextra 10052464 10053229 -18951427 + FW_DM LINE Jockey 3419 4183 -509 8 661 6249 30 0 0 chrUextra 10053329 10054095 -18950561 - DIVER_I LTR Pao -1983 3660 2895 8 661 3121 28 5 5 chrUextra 10055061 10055450 -18949206 + R1_DM LINE R1 4968 5356 0 8 661 2532 58 6 6 chrUextra 10055483 10055827 -18948829 + R1_DM LINE R1 1 344 -5012 8 661 5325 2 19 9 chrUextra 10055927 10056560 -18948096 + HMSBEAGLE_I LTR Gypsy 158 796 -5733 8 661 697 31 54 15 chrUextra 10056560 10056690 -18947966 + (TTA)n Simple_repeat Simple_repeat 3 137 0 8 661 5516 11 1 2 chrUextra 10056793 10057559 -18947097 - R1_DM LINE R1 -3822 1534 739 8 661 2420 103 43 35 chrUextra 10057659 10058425 -18946231 + DMSAT6 Satellite Satellite 1 771 -110 8 661 5401 33 0 0 chrUextra 10058525 10059156 -18945500 - NINJA_I LTR Pao -3914 2097 1467 8 661 1211 38 12 25 chrUextra 10059129 10059291 -18945365 - NINJA_I LTR Pao -5204 807 648 8 661 1940 23 0 0 chrUextra 10059940 10060157 -18944499 - DIVER2_LTR LTR Pao 0 385 169 8 661 3448 191 9 8 chrUextra 10060257 10061023 -18943633 - SAR_DM Satellite Satellite -439 1033 267 8 661 5446 89 28 14 chrUextra 10061123 10061888 -18942768 - Gypsy12_I LTR Gypsy -3294 2252 1478 8 661 6996 4 0 0 chrUextra 10061989 10062755 -18941901 + DM176_I LTR Gypsy 2341 3106 -3314 8 661 3987 54 41 2 chrUextra 10062855 10063397 -18941259 - I_DM LINE I -5569 662 100 8 661 6198 9 76 0 chrUextra 10063721 10064487 -18940169 + DM176_I LTR Gypsy 1110 1933 -4487 8 661 2831 112 21 57 chrUextra 10064631 10065161 -18939495 - BATUMI_I LTR Pao -6646 1317 807 8 661 1579 87 0 0 chrUextra 10065145 10065353 -18939303 - DMRT1B LINE R1 -2562 2621 2414 8 661 6998 9 0 0 chrUextra 10065453 10066219 -18938437 + R1_DM LINE R1 3898 4663 -693 8 661 6608 29 1 0 chrUextra 10066319 10067085 -18937571 - R1_DM LINE R1 -2389 2967 2201 8 661 1981 236 132 12 chrUextra 10067198 10067780 -18936876 + Invader3_I LTR Gypsy 198 849 -4039 8 661 256 111 0 0 chrUextra 10067776 10067812 -18936844 + Invader3_I LTR Gypsy 1436 1471 -3417 8 661 693 78 47 37 chrUextra 10067813 10067920 -18936736 + PROTOP_B DNA P 1046 1153 0 8 661 913 143 137 15 chrUextra 10068051 10068254 -18936402 + TART_B1 LINE telomeric 3913 4185 -6469 8 661 2999 65 54 0 chrUextra 10068254 10068641 -18936015 + TART LINE telomeric 1452 1859 -12618 8 661 1548 32 16 0 chrUextra 10068632 10068817 -18935839 + TART LINE telomeric 2045 2232 -12245 8 661 34 24 0 0 chrUextra 10069221 10069262 -18935394 + AT_rich Low_complexity Low_complexity 1 41 0 8 661 21 95 0 0 chrUextra 10069475 10069538 -18935118 + AT_rich Low_complexity Low_complexity 1 63 0 8 661 1201 0 8 0 chrUextra 10069550 10069683 -18934973 + LSU-rRNA_Dme rRNA rRNA 1 134 -3766 8 661 5822 54 29 1 chrUextra 10070649 10071413 -18933243 + TART LINE telomeric 2182 2966 -11511 8 661 22 0 0 0 chrUextra 10072217 10072239 -18932417 + AT_rich Low_complexity Low_complexity 1 22 0 8 661 3372 182 11 14 chrUextra 10072379 10073144 -18931512 - SAR_DM Satellite Satellite -505 967 206 8 661 6540 33 20 0 chrUextra 10073244 10074009 -18930647 + MAX_I LTR Pao 3834 4613 -3301 8 661 6917 1 1 1 chrUextra 10074109 10074874 -18929782 + FW_DM LINE Jockey 1099 1863 -2829 8 661 3215 182 13 6 chrUextra 10074974 10075739 -18928917 - SAR_DM Satellite Satellite -667 769 1 8 661 3179 41 160 0 chrUextra 10075839 10076513 -18928143 + PROTOP DNA P 42 823 -3657 8 661 756 21 0 0 chrUextra 10076508 10076604 -18928052 + PROTOP DNA P 3802 3897 -583 8 661 1272 61 0 0 chrUextra 10076722 10077020 -18927636 + (ATAAG)n Simple_repeat Simple_repeat 1 298 0 8 661 4017 0 0 0 chrUextra 10077020 10077448 -18927208 - ROO_LTR LTR Pao 0 428 1 8 661 3064 0 0 0 chrUextra 10077569 10077897 -18926759 + LSU-rRNA_Dme rRNA rRNA 3573 3900 0 8 661 266 196 0 19 chrUextra 10077998 10078050 -18926606 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 661 266 196 0 19 chrUextra 10078090 10078142 -18926514 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 661 266 196 0 19 chrUextra 10078182 10078234 -18926422 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 661 277 176 0 19 chrUextra 10078265 10078317 -18926339 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 661 645 272 91 20 chrUextra 10078801 10079199 -18925457 - QUASIMODO_I LTR Gypsy 0 6060 5635 8 661 2567 94 30 33 chrUextra 10079300 10080064 -18924592 - DMSAT6 Satellite Satellite -28 762 1 8 661 3210 197 11 11 chrUextra 10080164 10080903 -18923753 - SAR_DM Satellite Satellite -554 918 180 8 661 888 98 0 0 chrUextra 10080797 10080929 -18923727 + ARS406_DM Unknown Unknown 1 132 -221 8 661 2759 90 18 16 chrUextra 10081031 10081791 -18922865 + DMSAT6 Satellite Satellite 1 761 -97 8 661 4215 123 43 12 chrUextra 10082775 10083524 -18921132 + TART LINE telomeric 8950 9721 -4756 8 661 6401 41 5 3 chrUextra 10083624 10084389 -18920267 - R1_DM LINE R1 -3491 1865 1099 8 661 3429 19 40 0 chrUextra 10084489 10085254 -18919402 + R1_DM LINE R1 2047 2842 -2514 8 661 6868 11 1 1 chrUextra 10085355 10086119 -18918537 + R1_DM LINE R1 3546 4309 -1047 8 661 6757 9 0 0 chrUextra 10086219 10086984 -18917672 + Invader2_I LTR Gypsy 2260 3024 -1568 8 661 1620 0 1 7 chrUextra 10087084 10087849 -18916807 + (TAGA)n Simple_repeat Simple_repeat 1 760 0 8 661 3536 170 9 20 chrUextra 10087949 10088698 -18915958 + SAR_DM Satellite Satellite 379 1119 -353 8 661 334 180 32 43 chrUextra 10088621 10088714 -18915942 - XDMR_DM Unknown Unknown -9 351 260 8 661 3424 138 229 13 chrUextra 10088814 10089579 -18915077 - TART LINE telomeric -3819 10658 9729 8 661 6852 14 3 0 chrUextra 10090544 10091307 -18913349 - DOC2_DM LINE Jockey -2199 2594 1830 8 661 6806 16 1 1 chrUextra 10091409 10092174 -18912482 - R1_DM LINE R1 -1464 3892 3128 8 82 1553 276 66 75 chrUextra 10092274 10092925 -18911731 - ROVER-I_DM LTR Gypsy -5266 1318 330 8 662 5001 30 19 2 chrUextra 10093139 10093904 -18910752 - ROO_I LTR Pao -4875 3381 2567 8 662 6879 11 14 0 chrUextra 10094004 10094765 -18909891 - Invader1_I LTR Gypsy -1368 1818 1047 8 662 1456 12 6 6 chrUextra 10094880 10095048 -18909608 - TLD3 Unknown Unknown -3 169 2 8 662 1847 272 18 15 chrUextra 10095026 10095634 -18909022 + ROVER-I_DM LTR Gypsy 2576 3185 -3399 8 662 5151 33 3 0 chrUextra 10095734 10096333 -18908323 - DOC3_DM LINE Jockey -1941 2799 2199 8 662 1324 48 12 0 chrUextra 10096332 10096499 -18908157 - DOC3_DM LINE Jockey -2845 1895 1727 8 662 240 155 32 65 chrUextra 10098167 10098229 -18906427 + Gypsy_LTR LTR Gypsy 1 60 -422 8 662 3619 183 9 7 chrUextra 10098329 10099093 -18905563 + SAR_DM Satellite Satellite 229 994 -478 8 662 6446 28 44 3 chrUextra 10099194 10099959 -18904697 - R1_DM LINE R1 -2115 3241 2445 8 662 3004 3 0 69 chrUextra 10100059 10100434 -18904222 - LSU-rRNA_Dme rRNA rRNA -3551 349 1 8 662 21 95 0 0 chrUextra 10100446 10100509 -18904147 + AT_rich Low_complexity Low_complexity 1 63 0 8 662 34 24 0 0 chrUextra 10100722 10100763 -18903893 + AT_rich Low_complexity Low_complexity 1 41 0 8 662 6652 30 0 0 chrUextra 10100924 10101689 -18902967 + R1_DM LINE R1 2498 3262 -2094 8 662 4865 28 51 11 chrUextra 10101798 10102407 -18902249 - DOC3_DM LINE Jockey -1103 3637 3005 8 662 1207 34 40 0 chrUextra 10102406 10102554 -18902102 - DOC3_DM LINE Jockey -1886 2854 2701 8 662 7043 1 0 1 chrUextra 10102654 10103419 -18901237 + FW_DM LINE Jockey 1831 2594 -2098 8 662 1027 45 41 6 chrUextra 10103519 10103705 -18900951 + BLOOD_I LTR Gypsy 6350 6613 0 8 662 2004 47 8 45 chrUextra 10103705 10103973 -18900683 + BLOOD_LTR LTR Gypsy 1 258 -141 8 662 1488 33 33 0 chrUextra 10104101 10104284 -18900372 + BLOOD_I LTR Gypsy 32 220 -6393 8 662 6492 44 3 0 chrUextra 10104384 10105149 -18899507 - DIVER_I LTR Pao -4729 914 148 8 662 251 139 0 0 chrUextra 10105274 10105317 -18899339 + G6_DM LINE Jockey 1 43 -1999 8 662 844 115 0 0 chrUextra 10106114 10106244 -18898412 - ARS406_DM Unknown Unknown -223 130 1 8 662 3311 182 23 14 chrUextra 10106138 10106879 -18897777 + SAR_DM Satellite Satellite 180 927 -545 8 662 532 119 36 0 chrUextra 10107104 10107188 -18897468 + NTS_DM Other Other 4 90 -150 8 662 28 48 0 0 chrUextra 10107461 10107503 -18897153 + AT_rich Low_complexity Low_complexity 1 42 0 8 662 3702 171 9 18 chrUextra 10107846 10108609 -18896047 - SAR_DM Satellite Satellite -382 1090 335 8 662 248 174 0 128 chrUextra 10109134 10109338 -18895318 + (TTG)n Simple_repeat Simple_repeat 3 180 0 8 662 7035 11 1 0 chrUextra 10109574 10110339 -18894317 + BEL_I LTR Pao 2888 3653 -1751 8 662 2892 6 0 0 chrUextra 10110439 10110750 -18893906 + Gypsy4_I LTR Gypsy 5978 6288 0 8 662 2586 21 0 0 chrUextra 10110750 10111037 -18893619 + Gypsy4_LTR LTR Gypsy 1 287 0 8 662 278 59 0 0 chrUextra 10111305 10111339 -18893317 + ARS406_DM Unknown Unknown 156 189 -164 8 662 3094 193 16 24 chrUextra 10111315 10112069 -18892587 - SAR_DM Satellite Satellite -281 1191 444 8 662 6613 18 1 5 chrUextra 10112169 10112934 -18891722 - FW_DM LINE Jockey -565 4127 3366 8 662 3350 231 34 33 chrUextra 10113057 10115529 -18889127 - SAR_DM Satellite Satellite -396 2474 1 8 662 2120 20 0 0 chrUextra 10115629 10115875 -18888781 + DOC2_DM LINE Jockey 505 750 -4043 8 662 2861 12 0 0 chrUextra 10115875 10116196 -18888460 + MAX_LTR LTR Pao 1 321 0 8 662 1751 46 130 8 chrUextra 10116494 10116893 -18887763 + IDEFIX_I LTR Gypsy 2698 3145 -2483 8 662 2806 60 0 0 chrUextra 10116891 10117259 -18887397 + IDEFIX_I LTR Gypsy 3540 3907 -1721 8 662 996 151 25 106 chrUextra 10117378 10117615 -18887041 + DMLTR5 LTR Gypsy 49 266 0 8 662 200 167 69 0 chrUextra 10117646 10117718 -18886938 + (TA)n Simple_repeat Simple_repeat 1 77 0 8 662 22 35 0 0 chrUextra 10117720 10117749 -18886907 + AT_rich Low_complexity Low_complexity 1 29 0 8 662 285 216 0 0 chrUextra 10118225 10118276 -18886380 + Gypsy12A_LTR LTR Gypsy 414 464 -1816 8 662 773 273 36 79 chrUextra 10118385 10118803 -18885853 + Gypsy12_LTR LTR Gypsy 679 1078 -1258 8 662 852 179 35 6 chrUextra 10118815 10118989 -18885667 + Gypsy12_LTR LTR Gypsy 1158 1336 -1000 8 662 1705 58 16 0 chrUextra 10119101 10119358 -18885298 + QUASIMODO_I LTR Gypsy 5467 5727 -333 8 662 2148 122 43 33 chrUextra 10119452 10119854 -18884802 + QUASIMODO_LTR LTR Gypsy 63 602 -56 8 662 6024 25 30 18 chrUextra 10119954 10120719 -18883937 - MDG3_I LTR Gypsy -713 4273 3500 8 662 3664 5 0 0 chrUextra 10120819 10121223 -18883433 + R1_DM LINE R1 4953 5356 0 8 662 3273 3 0 0 chrUextra 10121221 10121584 -18883072 + LSU-rRNA_Dme rRNA rRNA 2640 3002 -898 8 662 6623 21 1 0 chrUextra 10122549 10123314 -18881342 - FW_DM LINE Jockey -644 4048 3283 8 662 6419 9 0 12 chrUextra 10123414 10124179 -18880477 - Gypsy4_I LTR Gypsy -5443 845 90 8 662 1097 183 72 0 chrUextra 10124279 10124514 -18880142 - Stalker2_I LTR Gypsy -6909 493 242 8 662 306 105 0 50 chrUextra 10124682 10124742 -18879914 - Stalker2_I LTR Gypsy -7345 57 1 8 662 345 25 0 0 chrUextra 10124742 10124769 -18879887 - STALKER4_I LTR Gypsy -6503 27 1 8 662 2451 7 0 4 chrUextra 10124769 10125044 -18879612 - STALKER4_LTR LTR Gypsy 0 402 129 8 662 6625 16 1 4 chrUextra 10125144 10125909 -18878747 + Gypsy4_I LTR Gypsy 984 1746 -4542 8 662 364 190 10 20 chrUextra 10126009 10126111 -18878545 + XDMR_DM Unknown Unknown 260 360 0 8 662 3396 177 8 17 chrUextra 10126025 10126774 -18877882 - SAR_DM Satellite Satellite -354 1118 377 8 662 3516 229 29 26 chrUextra 10126879 10128492 -18876164 - SAR_DM Satellite Satellite -577 1617 1 8 662 6652 11 9 1 chrUextra 10128604 10129369 -18875287 - Copia2_I LTR Copia -3161 1001 231 8 662 2074 126 139 0 chrUextra 10129481 10130118 -18874538 - HMSBEAGLE_I LTR Gypsy -741 5788 5063 8 662 654 117 0 0 chrUextra 10130130 10130224 -18874432 - HMSBEAGLE_I LTR Gypsy -1817 4712 4619 8 662 6908 0 1 3 chrUextra 10130334 10131099 -18873557 + SSU-rRNA_Dme rRNA rRNA 458 1221 -774 8 662 1622 348 8 8 chrUextra 10131199 10131963 -18872693 - GTWIN_I LTR Gypsy -2329 4092 3329 8 662 6673 4 0 1 chrUextra 10132064 10132828 -18871828 - ROO_I LTR Pao -3335 4921 4159 8 662 232 148 82 0 chrUextra 10132928 10132989 -18871667 - QUASIMODO_I LTR Gypsy -528 5532 5467 8 662 5083 45 59 13 chrUextra 10132979 10133692 -18870964 - QUASIMODO_I LTR Gypsy -886 5174 4429 8 662 2461 163 9 9 chrUextra 10133792 10134556 -18870100 + SAR_DM Satellite Satellite 1 763 -444 8 662 886 162 0 0 chrUextra 10134656 10134798 -18869858 - MDG1_I LTR Gypsy -2779 3817 3676 8 662 5221 8 0 2 chrUextra 10134822 10135420 -18869236 + DOC2_DM LINE Jockey 2676 3272 -1521 8 662 6241 19 1 7 chrUextra 10135520 10136151 -18868505 - ROO_I LTR Pao -2137 6119 5490 8 662 216 0 0 0 chrUextra 10136151 10136175 -18868481 + (CATAA)n Simple_repeat Simple_repeat 2 25 0 8 662 6241 19 1 7 chrUextra 10136175 10136284 -18868372 - ROO_I LTR Pao -2767 5489 5383 8 662 6869 9 0 0 chrUextra 10136384 10137148 -18867508 - MICROPIA_I LTR Gypsy -3265 1211 448 8 662 2146 111 13 48 chrUextra 10137248 10137625 -18867031 - Gypsy12_I LTR Gypsy -5156 390 27 8 662 1731 186 36 28 chrUextra 10137595 10137987 -18866669 - Gypsy12_LTR LTR Gypsy -1938 398 4 8 662 21 89 0 0 chrUextra 10138115 10138171 -18866485 + AT_rich Low_complexity Low_complexity 1 56 0 8 662 6199 4 1 0 chrUextra 10138190 10138876 -18865780 - SSU-rRNA_Dme rRNA rRNA 0 1995 1309 8 662 3222 169 25 43 chrUextra 10138976 10139739 -18864917 + SAR_DM Satellite Satellite 410 1158 -314 8 662 4026 26 43 2 chrUextra 10139840 10140604 -18864052 + R1_DM LINE R1 2152 2946 -2410 8 662 3390 183 11 11 chrUextra 10141571 10142332 -18862324 - SAR_DM Satellite Satellite -514 958 198 8 662 1376 35 0 9 chrUextra 10143301 10143619 -18861037 + (TTATA)n Simple_repeat Simple_repeat 1 314 0 8 662 383 120 0 26 chrUextra 10143619 10143644 -18861012 + (GGAGA)n Simple_repeat Simple_repeat 2 25 0 8 662 1400 39 0 6 chrUextra 10143644 10143824 -18860832 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 8 662 383 120 0 26 chrUextra 10143824 10143875 -18860781 + (GGAGA)n Simple_repeat Simple_repeat 1 51 0 8 662 1095 96 0 27 chrUextra 10143876 10144059 -18860597 + (GAGAA)n Simple_repeat Simple_repeat 2 179 0 8 662 439 315 79 30 chrUextra 10144474 10144859 -18859797 - Gypsy6_I LTR Gypsy -3888 3124 2788 8 662 3434 176 37 12 chrUextra 10145025 10145788 -18858868 - SAR_DM Satellite Satellite -435 1037 256 8 662 6870 1 3 3 chrUextra 10145888 10146652 -18858004 + SSU-rRNA_Dme rRNA rRNA 1010 1773 -222 8 662 281 154 19 19 chrUextra 10146753 10146806 -18857850 + HETRP_DM Satellite Satellite 1623 1675 -197 8 662 238 208 0 19 chrUextra 10146858 10146912 -18857744 + HETRP_DM Satellite Satellite 1580 1632 -240 8 662 328 174 250 42 chrUextra 10146959 10147055 -18857601 + HETRP_DM Satellite Satellite 1519 1634 -238 8 662 838 171 12 19 chrUextra 10147103 10147264 -18857392 + HETRP_DM Satellite Satellite 1516 1675 -197 8 662 238 208 0 19 chrUextra 10147316 10147370 -18857286 + HETRP_DM Satellite Satellite 1580 1632 -240 8 662 241 198 263 42 chrUextra 10147417 10147512 -18857144 + HETRP_DM Satellite Satellite 1519 1634 -238 8 662 6859 0 3 4 chrUextra 10147616 10148380 -18856276 - SSU-rRNA_Dme rRNA rRNA -116 1879 1117 8 662 1224 160 37 60 chrUextra 10148480 10148804 -18855852 - QUASIMODO_LTR LTR Gypsy -174 484 26 8 662 1760 34 0 0 chrUextra 10148847 10149084 -18855572 - QUASIMODO_I LTR Gypsy -333 5727 5491 8 662 995 82 34 0 chrUextra 10149093 10149240 -18855416 - QUASIMODO_I LTR Gypsy -885 5175 5024 8 662 4590 2 0 0 chrUextra 10149344 10149848 -18854808 - LSU-rRNA_Dme rRNA rRNA -757 3143 2640 8 662 2375 0 4 0 chrUextra 10149846 10150108 -18854548 - R1_DM LINE R1 0 5356 5094 8 662 1887 14 0 0 chrUextra 10150208 10150420 -18854236 - PROTOP_A DNA P -50 1055 844 8 662 4626 22 22 0 chrUextra 10150420 10150970 -18853686 + PROTOP_A DNA P 1 562 -543 8 662 1500 31 0 11 chrUextra 10151072 10151332 -18853324 + (TATAA)n Simple_repeat Simple_repeat 1 257 0 8 662 938 53 23 23 chrUextra 10151348 10151522 -18853134 + (TATAA)n Simple_repeat Simple_repeat 5 178 0 8 662 1620 0 0 0 chrUextra 10151522 10151834 -18852822 + (GAGAA)n Simple_repeat Simple_repeat 1 312 0 8 662 6546 18 1 3 chrUextra 10151936 10152700 -18851956 - R1_DM LINE R1 -973 4383 3621 8 662 6507 5 3 0 chrUextra 10152800 10153564 -18851092 - Invader2_I LTR Gypsy -2524 2068 1303 8 662 2550 102 23 8 chrUextra 10153664 10154396 -18850260 - DMSAT6 Satellite Satellite -45 743 1 8 662 6602 17 21 0 chrUextra 10154528 10155292 -18849364 + Gypsy4_I LTR Gypsy 2206 2985 -3303 8 662 6924 1 0 3 chrUextra 10155392 10156156 -18848500 + SSU-rRNA_Dme rRNA rRNA 301 1062 -933 8 662 3754 106 107 32 chrUextra 10156257 10156909 -18847747 + Gypsy12_I LTR Gypsy 404 1104 -4442 8 662 885 183 350 64 chrUextra 10157120 10157810 -18846846 + TART LINE telomeric 9195 10491 -3986 8 662 34 24 0 0 chrUextra 10157821 10157862 -18846794 + AT_rich Low_complexity Low_complexity 1 41 0 8 662 735 98 0 0 chrUextra 10157984 10158096 -18846560 - ARS406_DM Unknown Unknown -240 113 2 8 662 3290 188 8 9 chrUextra 10158001 10158748 -18845908 + SAR_DM Satellite Satellite 192 937 -535 8 662 6541 26 0 0 chrUextra 10158848 10159612 -18845044 - MDG1_I LTR Gypsy -1840 4756 3993 8 662 6954 4 0 0 chrUextra 10159712 10160476 -18844180 - DM1731_I LTR Copia -484 3492 2729 8 662 524 126 0 11 chrUextra 10160858 10160946 -18843710 + G3_DM LINE Jockey 103 189 -4416 8 662 384 185 75 101 chrUextra 10160937 10161106 -18843550 + G3_DM LINE Jockey 364 579 -4026 8 662 6592 11 8 0 chrUextra 10161440 10162204 -18842452 - QUASIMODO_I LTR Gypsy -3005 3055 2286 8 662 28 48 0 0 chrUextra 10162704 10162746 -18841910 + AT_rich Low_complexity Low_complexity 1 42 0 8 662 962 108 0 0 chrUextra 10163175 10163323 -18841333 - NTS_DM Other Other -86 154 7 8 662 282 179 18 0 chrUextra 10163403 10163459 -18841197 - NTS_DM Other Other -183 57 1 8 662 1059 159 29 21 chrUextra 10163459 10163697 -18840959 - NTS_DM Other Other 0 240 1 8 662 305 161 18 0 chrUextra 10163771 10163827 -18840829 - NTS_DM Other Other -183 57 1 8 662 302 153 68 48 chrUextra 10163827 10163930 -18840726 - NTS_DM Other Other 0 240 136 8 662 26 30 0 0 chrUextra 10164178 10164211 -18840445 + AT_rich Low_complexity Low_complexity 1 33 0 8 662 5076 51 62 8 chrUextra 10164896 10165625 -18839031 - PROTOP_B DNA P -162 991 224 8 662 234 26 308 0 chrUextra 10165621 10165660 -18838996 - PROTOP_B DNA P -1059 94 44 8 662 5524 99 7 0 chrUextra 10165765 10166524 -18838132 + Gypsy12_I LTR Gypsy 3485 4248 -1298 8 662 1884 40 0 0 chrUextra 10166624 10166850 -18837806 - FW_DM LINE Jockey -4466 226 1 8 662 4433 36 17 2 chrUextra 10166858 10167388 -18837268 + R1_DM LINE R1 1377 1914 -3442 8 662 1734 0 0 0 chrUextra 10167488 10167672 -18836984 + SSU-rRNA_Dme rRNA rRNA 1812 1995 0 8 662 21 89 0 0 chrUextra 10167691 10167747 -18836909 + AT_rich Low_complexity Low_complexity 1 56 0 8 662 2162 4 8 0 chrUextra 10168354 10168599 -18836057 - DOC LINE Jockey -4473 252 6 8 662 1433 52 156 0 chrUextra 10168612 10168823 -18835833 + PROTOP DNA P 2991 3234 -1246 8 662 1126 34 0 58 chrUextra 10169216 10169371 -18835285 - DM1731_I LTR Copia -84 3892 3747 8 662 5728 8 0 2 chrUextra 10169351 10169980 -18834676 - DM1731_I LTR Copia -364 3612 2985 8 662 2269 129 11 49 chrUextra 10170081 10170841 -18833815 - DMSAT6 Satellite Satellite -120 731 1 8 662 2030 5 0 0 chrUextra 10170944 10171164 -18833492 - DMRT1A LINE R1 -3684 1499 1280 8 662 4761 15 2 2 chrUextra 10171169 10171707 -18832949 + FW_DM LINE Jockey 3229 3766 -926 8 662 6891 4 1 0 chrUextra 10171808 10172571 -18832085 - Invader3_I LTR Gypsy -1849 3039 2276 8 662 6768 9 25 0 chrUextra 10172674 10173436 -18831220 + Gypsy4_I LTR Gypsy 2996 3776 -2512 8 662 1658 11 0 0 chrUextra 10173536 10173716 -18830940 + R1_DM LINE R1 5177 5356 0 8 662 4228 65 33 4 chrUextra 10173749 10174300 -18830356 + R1_DM LINE R1 1 567 -4789 8 662 326 0 23 0 chrUextra 10174400 10174443 -18830213 + NTS_DM Other Other 158 201 -39 8 662 898 9 0 35 chrUextra 10174495 10174608 -18830048 + NTS_DM Other Other 25 133 -107 8 662 1332 18 0 6 chrUextra 10174608 10174773 -18829883 + NTS_DM Other Other 38 201 -39 8 662 21 57 0 0 chrUextra 10174773 10174808 -18829848 + AT_rich Low_complexity Low_complexity 1 35 0 8 662 928 9 0 27 chrUextra 10174834 10174946 -18829710 + NTS_DM Other Other 25 133 -107 8 662 1530 20 20 20 chrUextra 10174946 10175149 -18829507 + NTS_DM Other Other 38 240 0 8 662 1800 75 3 29 chrUextra 10175264 10175524 -18829132 + STALKER4_LTR LTR Gypsy 151 399 -3 8 662 1187 40 7 13 chrUextra 10176130 10176283 -18828373 - DMCR1A LINE CR1 -4061 409 258 8 662 777 57 0 9 chrUextra 10176288 10176395 -18828261 - DMCR1A LINE CR1 -4364 106 1 8 662 25 31 0 0 chrUextra 10176673 10176705 -18827951 + AT_rich Low_complexity Low_complexity 1 32 0 8 662 3336 60 2 5 chrUextra 10176992 10177413 -18827243 - R1_DM LINE R1 -4761 595 176 8 662 3150 9 0 0 chrUextra 10177409 10177756 -18826900 + DMRT1B LINE R1 4251 4597 -586 8 662 3429 201 9 20 chrUextra 10177856 10178611 -18826045 + SAR_DM Satellite Satellite 1 746 -216 8 662 3217 180 21 29 chrUextra 10178720 10179481 -18825175 + SAR_DM Satellite Satellite 410 1164 -308 8 662 6662 21 9 1 chrUextra 10179584 10180348 -18824308 - G2_DM LINE Jockey -1806 1296 527 8 662 6735 14 0 0 chrUextra 10180448 10181212 -18823444 - Gypsy4_I LTR Gypsy -605 5683 4920 8 662 6890 7 1 1 chrUextra 10181312 10182076 -18822580 - TART LINE telomeric -34 14443 13680 8 662 1434 86 0 5 chrUextra 10182176 10182373 -18822283 + MDG1_LTR LTR Gypsy 217 412 -30 8 662 2320 95 34 11 chrUextra 10182373 10182726 -18821930 + MDG1_I LTR Gypsy 1 361 -6235 8 662 1249 84 32 14 chrUextra 10182723 10182940 -18821716 + MDG1_I LTR Gypsy 672 892 -5704 8 662 476 202 0 0 chrUextra 10183040 10183129 -18821527 - Gypsy_I LTR Gypsy -325 6182 6094 8 662 2324 45 3 37 chrUextra 10183257 10183554 -18821102 - Gypsy4_LTR LTR Gypsy 0 287 1 8 662 2326 4 0 0 chrUextra 10183554 10183804 -18820852 - Gypsy4_I LTR Gypsy 0 6288 6039 8 662 21 89 0 0 chrUextra 10184115 10184171 -18820485 + AT_rich Low_complexity Low_complexity 1 56 0 8 662 27 62 0 0 chrUextra 10184209 10184257 -18820399 + AT_rich Low_complexity Low_complexity 1 48 0 8 662 26 30 0 0 chrUextra 10184297 10184330 -18820326 + AT_rich Low_complexity Low_complexity 1 33 0 8 662 1273 40 7 0 chrUextra 10184768 10184917 -18819739 + DMRT1B LINE R1 3462 3611 -1572 8 662 5512 19 0 0 chrUextra 10184911 10185532 -18819124 + DMRT1B LINE R1 3718 4338 -845 8 662 51 31 0 0 chrUextra 10185983 10186048 -18818608 + AT_rich Low_complexity Low_complexity 1 65 0 8 662 22 35 0 0 chrUextra 10186223 10186252 -18818404 + AT_rich Low_complexity Low_complexity 1 29 0 8 662 4502 16 86 0 chrUextra 10186496 10187260 -18817396 - QUASIMODO_I LTR Gypsy -4489 1571 742 8 662 532 119 36 0 chrUextra 10187482 10187566 -18817090 - NTS_DM Other Other -150 90 4 8 662 1388 6 0 18 chrUextra 10187676 10187841 -18816815 - NTS_DM Other Other -78 162 1 8 662 1915 4 17 21 chrUextra 10187841 10188082 -18816574 - NTS_DM Other Other 0 240 1 8 662 225 0 95 71 chrUextra 10188082 10188124 -18816532 - NTS_DM Other Other 0 240 198 8 662 6445 13 24 0 chrUextra 10188224 10188988 -18815668 + STALKER4_I LTR Gypsy 2934 3715 -2815 8 662 3307 187 16 28 chrUextra 10189089 10189852 -18814804 - SAR_DM Satellite Satellite -587 753 1 8 662 3342 181 16 21 chrUextra 10189954 10190715 -18813941 + SAR_DM Satellite Satellite 425 1181 -291 8 662 3092 63 5 20 chrUextra 10190867 10191274 -18813382 + Baggins1 LINE LOA 4791 5191 -262 8 662 1248 14 0 0 chrUextra 10191680 10191824 -18812832 + DM176_I LTR Gypsy 6277 6420 0 8 662 3953 16 9 104 chrUextra 10191824 10192384 -18812272 + DM176_LTR LTR Gypsy 1 507 0 8 662 5530 85 73 12 chrUextra 10192544 10193308 -18811348 + Gypsy12_I LTR Gypsy 4666 5476 -70 8 662 4053 26 90 0 chrUextra 10193408 10194073 -18810583 + R1_DM LINE R1 4632 5356 0 8 662 546 31 0 0 chrUextra 10194106 10194171 -18810485 + R1_DM LINE R1 1 65 -5291 8 662 1077 50 50 0 chrUextra 10194272 10194413 -18810243 - MDG1_I LTR Gypsy -1048 5548 5401 8 662 4716 47 34 3 chrUextra 10194419 10195036 -18809620 - DM297_I LTR Gypsy -1816 4351 3716 8 662 3307 191 18 22 chrUextra 10195136 10195894 -18808762 - SAR_DM Satellite Satellite -596 754 1 8 662 353 158 19 56 chrUextra 10196000 10196107 -18808549 + XDMR_DM Unknown Unknown 258 360 0 8 662 3452 168 12 25 chrUextra 10196017 10196764 -18807892 - SAR_DM Satellite Satellite -354 1118 382 8 662 5829 99 0 0 chrUextra 10196864 10197628 -18807028 - HMSBEAGLE_I LTR Gypsy -1885 4644 3881 8 662 6928 3 1 1 chrUextra 10197730 10198491 -18806165 - R1_DM LINE R1 -897 4459 3699 8 662 2814 207 15 17 chrUextra 10198593 10199356 -18805300 + SAR_DM Satellite Satellite 1 761 -258 8 662 6268 3 14 0 chrUextra 10199456 10200220 -18804436 - QUASIMODO_I LTR Gypsy -165 5895 5121 8 662 4139 68 17 0 chrUextra 10200320 10200899 -18803757 + BS3_DM LINE Jockey 360 1044 -746 8 662 1520 87 0 0 chrUextra 10200889 10201084 -18803572 + BS3_DM LINE Jockey 1311 1505 -285 8 662 6251 34 17 11 chrUextra 10201184 10201948 -18802708 + BATUMI_I LTR Pao 1425 2193 -5770 8 662 1890 47 0 8 chrUextra 10202048 10202283 -18802373 + BATUMI_I LTR Pao 7731 7963 0 8 662 1895 38 4 28 chrUextra 10202305 10202552 -18802104 + BATUMI_LTR LTR Pao 32 272 0 8 662 37 0 0 0 chrUextra 10202552 10202589 -18802067 + AT_rich Low_complexity Low_complexity 1 37 0 8 662 1438 24 6 0 chrUextra 10202647 10202812 -18801844 - PROTOP_A DNA P 0 1105 940 8 662 3105 180 41 28 chrUextra 10202912 10203673 -18800983 + SAR_DM Satellite Satellite 402 1172 -300 8 662 286 262 12 0 chrUextra 10203887 10203971 -18800685 + G-rich Low_complexity Low_complexity 4 88 0 8 662 222 118 0 0 chrUextra 10203997 10204031 -18800625 + (CTG)n Simple_repeat Simple_repeat 3 36 0 8 662 237 108 0 0 chrUextra 10204075 10204112 -18800544 + (CTG)n Simple_repeat Simple_repeat 3 39 0 8 662 409 151 32 0 chrUextra 10204395 10204488 -18800168 - ROO_I LTR Pao -7521 735 640 8 662 3384 0 0 63 chrUextra 10204640 10205055 -18799601 - LSU-rRNA_Dme rRNA rRNA -3511 389 1 8 662 21 95 0 0 chrUextra 10205067 10205130 -18799526 + AT_rich Low_complexity Low_complexity 1 63 0 8 662 34 24 0 0 chrUextra 10205343 10205384 -18799272 + AT_rich Low_complexity Low_complexity 1 41 0 8 662 6614 22 3 3 chrUextra 10205504 10206268 -18798388 + R1_DM LINE R1 3990 4753 -603 8 662 6585 28 3 0 chrUextra 10206368 10207132 -18797524 - R1_DM LINE R1 -1847 3509 2744 8 662 1494 110 68 0 chrUextra 10207232 10207496 -18797160 + DMSAT6 Satellite Satellite 189 470 0 8 662 2683 97 8 39 chrUextra 10207513 10207995 -18796661 + DMSAT6 Satellite Satellite 1 467 -3 8 662 4499 2 2 0 chrUextra 10208096 10208582 -18796074 - SSU-rRNA_Dme rRNA rRNA -1056 939 453 8 662 1619 92 45 30 chrUextra 10208589 10208858 -18795798 + STALKER4_I LTR Gypsy 564 836 -5694 8 662 4359 6 0 22 chrUextra 10208958 10209456 -18795200 - QUASIMODO_I LTR Gypsy -5573 487 1 8 662 2327 4 34 4 chrUextra 10209456 10209721 -18794935 - QUASIMODO_LTR LTR Gypsy 0 658 386 8 662 1821 0 0 10 chrUextra 10209821 10210026 -18794630 + BATUMI_I LTR Pao 7761 7963 0 8 662 2413 17 0 27 chrUextra 10210026 10210319 -18794337 + BATUMI_I LTR Pao 7002 7286 -677 8 662 2154 16 0 0 chrUextra 10210309 10210558 -18794098 + G_DM LINE Jockey 638 886 -3460 8 662 1885 23 0 0 chrUextra 10210684 10210898 -18793758 - R1_DM LINE R1 -1000 4356 4143 8 662 4556 15 79 2 chrUextra 10210901 10211447 -18793209 - R1_DM LINE R1 -1469 3887 3300 8 662 6120 38 90 1 chrUextra 10211547 10212310 -18792346 + Baggins1 LINE LOA 3596 4426 -1027 8 662 228 183 33 16 chrUextra 10212410 10212471 -18792185 - Stalker2_I LTR Gypsy -7050 352 291 8 662 28 48 0 0 chrUextra 10212478 10212520 -18792136 + AT_rich Low_complexity Low_complexity 1 42 0 8 662 3420 48 1 14 chrUextra 10212608 10213047 -18791609 - STALKER4_LTR LTR Gypsy -3 399 1 8 662 1061 24 8 0 chrUextra 10213047 10213170 -18791486 - DMCR1A LINE CR1 -562 3908 3785 8 662 6549 21 48 0 chrUextra 10213273 10214036 -18790620 + R1_DM LINE R1 3968 4767 -589 8 662 661 13 13 0 chrUextra 10214136 10214213 -18790443 - STALKER4_LTR LTR Gypsy -324 78 1 8 662 5639 12 4 3 chrUextra 10214213 10214899 -18789757 - STALKER4_I LTR Gypsy 0 6530 5844 8 662 2594 97 34 32 chrUextra 10215000 10215760 -18788896 + DMSAT6 Satellite Satellite 1 762 -119 8 662 2580 73 249 21 chrUextra 10215862 10216463 -18788193 - MAX_I LTR Pao -5960 1954 1217 8 662 580 93 341 13 chrUextra 10216447 10216599 -18788057 - MAX_I LTR Pao -6560 1354 1153 8 662 6481 35 1 0 chrUextra 10216725 10217488 -18787168 - R1_DM LINE R1 -1802 3554 2791 8 662 3204 194 13 21 chrUextra 10217589 10218351 -18786305 - SAR_DM Satellite Satellite -281 1191 436 8 662 22 35 0 0 chrUextra 10218554 10218583 -18786073 + AT_rich Low_complexity Low_complexity 1 29 0 8 662 37 39 0 0 chrUextra 10218684 10218735 -18785921 + AT_rich Low_complexity Low_complexity 1 51 0 8 662 28 48 0 0 chrUextra 10219090 10219132 -18785524 + AT_rich Low_complexity Low_complexity 1 42 0 8 662 6811 3 1 4 chrUextra 10219325 10220077 -18784579 - R1_DM LINE R1 0 5356 4607 8 662 6792 13 1 5 chrUextra 10221040 10221803 -18782853 - LSU-rRNA_Dme rRNA rRNA -2399 1501 742 8 662 5728 26 9 60 chrUextra 10221903 10222666 -18781990 - NINJA_I LTR Pao -5057 954 231 8 82 3620 224 19 37 chrUextra 10222766 10224392 -18780264 - SAR_DM Satellite Satellite -853 1595 1 8 663 6292 14 4 0 chrUextra 10224492 10225255 -18779401 + FW_DM LINE Jockey 1004 1769 -2923 8 663 5739 49 25 3 chrUextra 10225355 10226118 -18778538 - R1_DM LINE R1 -3560 1796 1017 8 663 5042 108 3 7 chrUextra 10226218 10226981 -18777675 + Gypsy12_I LTR Gypsy 1623 2382 -3164 8 663 6660 3 0 0 chrUextra 10227081 10227844 -18776812 + LSU-rRNA_Dme rRNA rRNA 1862 2624 -1276 8 663 2838 109 14 48 chrUextra 10227961 10228461 -18776195 + Gypsy12_LTR LTR Gypsy 1831 2313 -23 8 663 623 249 21 56 chrUextra 10228473 10228707 -18775949 + TAHRE LINE telomeric 9807 10032 -431 8 663 2449 180 25 75 chrUextra 10228809 10229570 -18775086 + SAR_DM Satellite Satellite 296 1018 -454 8 663 994 110 0 0 chrUextra 10229673 10229818 -18774838 - Gypsy12_I LTR Gypsy -1693 3853 3709 8 663 3138 55 1 14 chrUextra 10229818 10230257 -18774399 - STALKER4_LTR LTR Gypsy -3 399 1 8 663 1291 11 17 0 chrUextra 10230257 10230433 -18774223 - STALKER4_I LTR Gypsy 0 6530 6352 8 663 945 34 0 0 chrUextra 10230533 10230652 -18774004 + DMCR1A LINE CR1 1754 1872 -2598 8 663 1916 94 45 0 chrUextra 10230663 10230951 -18773705 + DMCR1A LINE CR1 3220 3520 -950 8 663 2565 57 26 6 chrUextra 10230944 10231296 -18773360 + DMCR1A LINE CR1 3655 4013 -457 8 663 2865 37 45 0 chrUextra 10231396 10231776 -18772880 - IDEFIX_I LTR Gypsy -3904 1724 1328 8 663 1875 23 234 0 chrUextra 10231775 10232159 -18772497 - IDEFIX_I LTR Gypsy -4558 1070 597 8 663 1319 312 55 8 chrUextra 10232313 10233017 -18771639 + MICROPIA_I LTR Gypsy 1211 1947 -2529 8 663 1657 296 17 19 chrUextra 10233127 10233826 -18770830 + Invader1_I LTR Gypsy 1867 2564 -622 8 663 4980 107 5 3 chrUextra 10233986 10234748 -18769908 + HETA LINE telomeric 1654 2417 -3664 8 663 2777 166 21 11 chrUextra 10234853 10235611 -18769045 - BATUMI_I LTR Pao -3112 4802 3964 8 663 3733 32 80 3 chrUextra 10235711 10236474 -18768182 - R1_DM LINE R1 -149 5207 4386 8 663 6303 17 0 0 chrUextra 10236574 10237337 -18767319 + ROO_I LTR Pao 2568 3330 -4926 8 663 888 43 0 0 chrUextra 10238083 10238200 -18766456 + (TATTG)n Simple_repeat Simple_repeat 3 119 0 8 663 1282 13 0 0 chrUextra 10238300 10238456 -18766200 + ALUII_DM Unknown Unknown 85 240 0 8 663 6617 8 0 0 chrUextra 10239163 10239926 -18764730 + Invader1_I LTR Gypsy 517 1279 -1907 8 663 6022 1 4 1 chrUextra 10240026 10240789 -18763867 + DM412 LTR Gypsy 943 1707 -5190 8 663 312 259 0 0 chrUextra 10240893 10240978 -18763678 + (CTATG)n Simple_repeat Simple_repeat 1 85 0 8 663 573 115 106 29 chrUextra 10241011 10241181 -18763475 + NTS_DM Other Other 58 240 0 8 663 285 104 21 0 chrUextra 10241181 10241229 -18763427 + NTS_DM Other Other 1 49 -191 8 663 651 124 0 0 chrUextra 10241311 10241416 -18763240 + NTS_DM Other Other 1 105 -135 8 663 447 229 0 0 chrUextra 10241476 10241651 -18763005 + T-rich Low_complexity Low_complexity 4 178 0 8 663 5402 0 143 31 chrUextra 10241752 10242515 -18762141 - ROO_I LTR Pao -7190 1066 219 8 663 6547 9 1 0 chrUextra 10242615 10243378 -18761278 - Gypsy6_I LTR Gypsy -3624 3388 2625 8 663 1725 165 19 9 chrUextra 10243478 10244241 -18760415 + SAR_DM Satellite Satellite 1 770 -749 8 663 6416 8 0 0 chrUextra 10244341 10245104 -18759552 + DMRT1B LINE R1 801 1563 -3620 8 663 1435 310 33 14 chrUextra 10245204 10245967 -18758689 - ROVER-I_DM LTR Gypsy -1993 4591 3815 8 663 2977 172 16 51 chrUextra 10246069 10246828 -18757828 + SAR_DM Satellite Satellite 192 923 -549 8 663 803 117 9 14 chrUextra 10246932 10247690 -18756966 - RSP Satellite Satellite -54 753 1 8 663 6591 4 3 0 chrUextra 10247793 10248556 -18756100 + Copia2_I LTR Copia 3308 4072 -90 8 663 1266 70 5 36 chrUextra 10248656 10248850 -18755806 + BATUMI_LTR LTR Pao 84 271 -1 8 663 1443 28 0 0 chrUextra 10248850 10249026 -18755630 + (TTATA)n Simple_repeat Simple_repeat 1 176 0 8 663 1395 45 0 0 chrUextra 10249043 10249222 -18755434 + (TTATA)n Simple_repeat Simple_repeat 2 180 0 8 663 655 154 45 56 chrUextra 10249240 10249419 -18755237 - ROVER-LTR_DM LTR Gypsy -11 356 180 8 663 2781 45 37 0 chrUextra 10249519 10249900 -18754756 + ZAM_I LTR Gypsy 7092 7486 -4 8 663 2280 85 45 3 chrUextra 10249903 10250258 -18754398 + ZAM_LTR LTR Gypsy 1 370 -102 8 663 6321 3 0 0 chrUextra 10250382 10251145 -18753511 + QUASIMODO_I LTR Gypsy 4602 5364 -696 8 663 2933 187 44 11 chrUextra 10251248 10252003 -18752653 - SAR_DM Satellite Satellite -464 1008 229 8 663 3392 168 9 9 chrUextra 10252971 10253722 -18750934 - SAR_DM Satellite Satellite -396 1076 326 8 663 1160 204 31 36 chrUextra 10253834 10254271 -18750385 + Gypsy12A_LTR LTR Gypsy 139 550 -1786 8 663 588 180 57 13 chrUextra 10254304 10254590 -18750066 + Gypsy12A_LTR LTR Gypsy 819 1151 -1129 8 663 245 133 0 0 chrUextra 10254697 10254742 -18749914 - ARS406_DM Unknown Unknown -308 45 1 8 663 3452 163 13 14 chrUextra 10254702 10255460 -18749196 + SAR_DM Satellite Satellite 246 1002 -470 8 663 1731 267 44 36 chrUextra 10255570 10256323 -18748333 + ROVER-I_DM LTR Gypsy 1352 2110 -4474 8 663 3072 196 9 9 chrUextra 10256427 10257183 -18747473 - SAR_DM Satellite Satellite -435 1037 282 8 663 1041 8 0 8 chrUextra 10257286 10257416 -18747240 + ROVER-I_DM LTR Gypsy 6456 6584 0 8 663 3054 3 0 24 chrUextra 10257416 10257792 -18746864 + ROVER-LTR_DM LTR Gypsy 1 367 0 8 663 1233 205 0 0 chrUextra 10257792 10258049 -18746607 + ROVER-I_DM LTR Gypsy 3862 4118 -2466 8 663 2553 170 13 7 chrUextra 10258151 10258912 -18745744 + SAR_DM Satellite Satellite 1 765 -610 8 663 2322 91 28 32 chrUextra 10259012 10259775 -18744881 + DMSAT6 Satellite Satellite 1 759 -264 8 663 6371 18 0 0 chrUextra 10259875 10260638 -18744018 + R1_DM LINE R1 1685 2447 -2909 8 663 5703 45 18 1 chrUextra 10260738 10261501 -18743155 - R1_DM LINE R1 -3956 1400 625 8 663 999 0 0 0 chrUextra 10261601 10261718 -18742938 + NOMAD_I LTR Gypsy 6456 6572 0 8 663 3448 10 0 0 chrUextra 10261718 10262123 -18742533 + NOMAD_LTR LTR Gypsy 114 518 0 8 663 212 0 0 35 chrUextra 10262256 10262285 -18742371 + (TTA)n Simple_repeat Simple_repeat 2 29 0 8 663 317 104 0 0 chrUextra 10262316 10262364 -18742292 - DNAREP1_DM LINE Penelope -358 236 189 8 663 6601 1 0 1 chrUextra 10262464 10263225 -18741431 + DOC LINE Jockey 3417 4176 -549 8 663 6476 7 16 0 chrUextra 10263327 10264090 -18740566 - Gypsy4_I LTR Gypsy -2793 3495 2721 8 663 920 68 6 17 chrUextra 10264190 10264950 -18739706 - RSP Satellite Satellite -56 752 1 8 663 3919 112 89 31 chrUextra 10265053 10265816 -18738840 - R1_DM LINE R1 -3218 2138 1332 8 663 2237 111 22 17 chrUextra 10265916 10266678 -18737978 + DMSAT6 Satellite Satellite 1 765 -108 8 663 3015 189 16 25 chrUextra 10266780 10267540 -18737116 - SAR_DM Satellite Satellite -587 753 1 8 663 454 119 12 0 chrUextra 10267643 10267727 -18736929 - DMSAT6 Satellite Satellite -251 219 135 8 663 2371 106 35 11 chrUextra 10267743 10268402 -18736254 - DMSAT6 Satellite Satellite 0 675 1 8 663 6169 35 1 0 chrUextra 10268502 10269264 -18735392 + DMCR1A LINE CR1 838 1600 -2870 8 663 4678 16 11 0 chrUextra 10269365 10269915 -18734741 + R1_DM LINE R1 1870 2425 -2931 8 663 1724 10 0 19 chrUextra 10269915 10270126 -18734530 + ACCORD2_LTR LTR Gypsy 1 207 -8 8 663 786 184 35 15 chrUextra 10270226 10270425 -18734231 - SAR_DM Satellite Satellite -727 745 543 8 663 2152 191 9 19 chrUextra 10270436 10270975 -18733681 - SAR_DM Satellite Satellite -396 1076 543 8 663 2853 183 44 28 chrUextra 10271095 10271849 -18732807 - SAR_DM Satellite Satellite -255 1217 452 8 663 3362 172 9 9 chrUextra 10271950 10272700 -18731956 + SAR_DM Satellite Satellite 284 1033 -439 8 663 22 0 0 0 chrUextra 10273450 10273472 -18731184 + AT_rich Low_complexity Low_complexity 1 22 0 8 663 3163 176 9 25 chrUextra 10273674 10274421 -18730235 + SAR_DM Satellite Satellite 384 1118 -354 8 663 250 161 16 31 chrUextra 10274365 10274429 -18730227 - XDMR Unknown Unknown 0 361 299 8 663 1620 29 20 20 chrUextra 10274543 10274902 -18729754 + (TTCTC)n Simple_repeat Simple_repeat 1 359 0 8 663 5896 1 1 60 chrUextra 10275398 10276160 -18728496 + LSU-rRNA_Dme rRNA rRNA 1711 2427 -1473 8 663 1620 0 0 0 chrUextra 10276260 10276492 -18728164 + (GAGAA)n Simple_repeat Simple_repeat 1 232 0 8 663 3063 197 12 21 chrUextra 10277122 10277884 -18726772 - SAR_DM Satellite Satellite -587 755 1 8 663 450 108 40 0 chrUextra 10278850 10278924 -18725732 - DMCR1A LINE CR1 -4387 83 7 8 663 235 146 0 0 chrUextra 10278991 10279032 -18725624 + DMCR1A LINE CR1 744 784 -3686 8 663 252 208 0 0 chrUextra 10279170 10279223 -18725433 + NOMAD_I LTR Gypsy 6520 6572 0 8 663 3212 5 8 8 chrUextra 10279708 10280103 -18724553 - DM297_LTR LTR Gypsy -18 396 2 8 663 180 0 0 0 chrUextra 10280103 10280123 -18724533 + (TA)n Simple_repeat Simple_repeat 1 20 0 8 663 2988 0 0 0 chrUextra 10280123 10280470 -18724186 + ROVER-LTR_DM LTR Gypsy 2 348 -19 8 663 793 31 45 23 chrUextra 10280570 10280702 -18723954 + NTS_DM Other Other 106 240 0 8 663 1850 4 17 13 chrUextra 10280702 10280941 -18723715 + NTS_DM Other Other 1 240 0 8 663 1847 4 17 13 chrUextra 10280941 10281180 -18723476 + NTS_DM Other Other 1 240 0 8 663 1147 20 13 0 chrUextra 10281180 10281332 -18723324 + NTS_DM Other Other 1 154 -86 8 663 248 170 0 0 chrUextra 10281475 10281522 -18723134 - GTWIN_I LTR Gypsy -1444 4977 4931 8 663 244 125 0 0 chrUextra 10281585 10281625 -18723031 - BARI1 DNA Tc1 -1708 42 3 8 663 4353 29 3 38 chrUextra 10281593 10282194 -18722462 + IDEFIX_LTR LTR Gypsy 1 580 -14 8 663 246 150 0 0 chrUextra 10282334 10282374 -18722282 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 663 5088 0 16 2 chrUextra 10282447 10283056 -18721600 + G_DM LINE Jockey 1 618 -3728 8 663 2186 202 62 2 chrUextra 10283156 10283640 -18721016 + TIRANT_I LTR Gypsy 2209 2721 -4971 8 663 2283 22 4 0 chrUextra 10283640 10283918 -18720738 + PROTOP_A DNA P 1 279 -826 8 663 6015 0 28 4 chrUextra 10284040 10284780 -18719876 + ROO_I LTR Pao 1 758 -7498 8 663 6119 24 5 1 chrUextra 10284880 10285642 -18719014 + R1_DM LINE R1 2336 3100 -2256 8 663 1934 213 44 24 chrUextra 10285742 10286504 -18718152 - SAR_DM Satellite Satellite -1042 777 1 8 663 284 276 91 95 chrUextra 10286604 10286868 -18717788 + Invader1_LTR LTR Gypsy 106 368 -55 8 663 6474 3 0 0 chrUextra 10287466 10288228 -18716428 - STALKER4_I LTR Gypsy -4293 2237 1476 8 663 21 36 0 0 chrUextra 10288654 10288682 -18715974 + AT_rich Low_complexity Low_complexity 1 28 0 8 663 23 0 0 0 chrUextra 10288720 10288743 -18715913 + AT_rich Low_complexity Low_complexity 1 23 0 8 663 6289 3 1 0 chrUextra 10289190 10289951 -18714705 - STALKER4_I LTR Gypsy -4996 1534 773 8 663 6673 0 0 0 chrUextra 10290052 10290814 -18713842 - DOC LINE Jockey -685 4040 3279 8 663 4358 55 9 4 chrUextra 10290914 10291667 -18712989 - TART LINE telomeric -5618 8859 8328 8 663 6235 11 0 1 chrUextra 10291776 10292538 -18712118 - Invader2_I LTR Gypsy -1636 2956 2196 8 663 3241 176 8 18 chrUextra 10292639 10293399 -18711257 + SAR_DM Satellite Satellite 352 1103 -369 8 663 6335 20 0 0 chrUextra 10293500 10294262 -18710394 + G2_DM LINE Jockey 233 994 -2108 8 663 4296 2 2 0 chrUextra 10294362 10294858 -18709798 - LSU-rRNA_Dme rRNA rRNA -764 3136 2640 8 663 2265 11 0 4 chrUextra 10294856 10295124 -18709532 - R1_DM LINE R1 0 5356 5090 8 663 1386 0 0 0 chrUextra 10295224 10295378 -18709278 + (TCTTG)n Simple_repeat Simple_repeat 2 155 0 8 663 2971 183 43 11 chrUextra 10296087 10296834 -18707822 - SAR_DM Satellite Satellite -478 994 224 8 663 442 99 0 0 chrUextra 10296772 10296843 -18707813 + ARS406_DM Unknown Unknown 1 71 -282 8 663 745 119 58 68 chrUextra 10296948 10297138 -18707518 + ROVER-LTR_DM LTR Gypsy 180 367 0 8 663 331 93 19 0 chrUextra 10297138 10297192 -18707464 + ROVER-I_DM LTR Gypsy 1 55 -6529 8 663 220 252 26 26 chrUextra 10297560 10297674 -18706982 + (CTAAA)n Simple_repeat Simple_repeat 3 116 0 8 663 22 0 0 0 chrUextra 10297844 10297866 -18706790 + AT_rich Low_complexity Low_complexity 1 22 0 8 663 1090 61 0 0 chrUextra 10299535 10299682 -18704974 + FW2_DM LINE Jockey 825 971 -2990 8 663 4238 71 48 5 chrUextra 10299661 10300287 -18704369 + FW2_DM LINE Jockey 1328 1980 -1981 8 663 6260 12 7 5 chrUextra 10300396 10301158 -18703498 + ACCORD2_I LTR Gypsy 3875 4637 -2575 8 663 6403 16 0 0 chrUextra 10301258 10302020 -18702636 + DOC2_DM LINE Jockey 3902 4663 -130 8 663 1029 312 35 40 chrUextra 10302182 10302810 -18701846 - MICROPIA_I LTR Gypsy -3850 626 2 8 663 6483 1 1 0 chrUextra 10302982 10303744 -18700912 - LSU-rRNA_Dme rRNA rRNA -2774 1126 364 8 663 313 0 0 0 chrUextra 10303844 10303883 -18700773 - Copia2_LTR_DM LTR Copia -131 67 29 8 663 3528 12 7 0 chrUextra 10303883 10304303 -18700353 - Invader1_LTR LTR Gypsy 0 423 1 8 663 2123 19 0 0 chrUextra 10304335 10304606 -18700050 - Copia2_I LTR Copia 0 4162 3892 8 663 1749 22 57 0 chrUextra 10304706 10304933 -18699723 + DOC2_DM LINE Jockey 1455 1694 -3099 8 663 4304 14 0 0 chrUextra 10304951 10305468 -18699188 + DOC2_DM LINE Jockey 2538 3054 -1739 8 663 6372 4 0 0 chrUextra 10305568 10306330 -18698326 + STALKER4_I LTR Gypsy 3075 3836 -2694 8 663 2232 116 17 46 chrUextra 10306430 10307192 -18697464 + DMSAT6 Satellite Satellite 1 739 -74 8 663 3370 236 40 19 chrUextra 10307292 10308916 -18695740 - SAR_DM Satellite Satellite -451 1658 1 8 663 2234 104 5 58 chrUextra 10309033 10309775 -18694881 + DMSAT6 Satellite Satellite 1 703 -3 8 663 1329 28 11 6 chrUextra 10309878 10310057 -18694599 + IDEFIX_I LTR Gypsy 5449 5628 0 8 663 3296 35 211 4 chrUextra 10310057 10310549 -18694107 + IDEFIX_LTR LTR Gypsy 1 594 0 8 663 616 47 0 0 chrUextra 10310555 10310640 -18694016 - DM412 LTR Gypsy -3153 3744 3660 8 663 2253 158 151 48 chrUextra 10310741 10311502 -18693154 + TART LINE telomeric 9171 10196 -4281 8 663 4763 60 0 5 chrUextra 10311647 10312311 -18692345 + BATUMI_I LTR Pao 7303 7963 0 8 663 312 59 0 56 chrUextra 10312311 10312362 -18692294 + BATUMI_I LTR Pao 7002 7049 -914 8 663 3381 170 7 8 chrUextra 10312490 10313226 -18691430 - SAR_DM Satellite Satellite -396 1076 342 8 663 24 53 0 0 chrUextra 10313723 10313761 -18690895 + AT_rich Low_complexity Low_complexity 1 38 0 8 663 1717 5 0 0 chrUextra 10314188 10314407 -18690249 + STALKER4_I LTR Gypsy 6312 6530 0 8 663 2223 4 0 0 chrUextra 10314407 10314664 -18689992 + STALKER4_LTR LTR Gypsy 1 257 -145 8 663 1294 58 5 50 chrUextra 10314664 10314864 -18689792 - ROVER-LTR_DM LTR Gypsy 0 367 177 8 663 972 17 0 0 chrUextra 10315050 10315167 -18689489 + 5S_DM RNA RNA 19 135 0 8 663 1176 0 0 0 chrUextra 10315408 10315543 -18689113 + 5S_DM RNA RNA 1 135 0 8 663 227 0 0 0 chrUextra 10315784 10315812 -18688844 + 5S_DM RNA RNA 1 28 -107 8 663 3167 171 7 14 chrUextra 10315913 10316627 -18688029 + SAR_DM Satellite Satellite 195 903 -569 8 663 794 20 0 0 chrUextra 10316539 10316637 -18688019 - ARS406_DM Unknown Unknown -166 187 90 8 663 283 50 0 0 chrUextra 10316634 10316674 -18687982 - ARS406_DM Unknown Unknown -195 158 119 8 663 6536 1 0 0 chrUextra 10316774 10317536 -18687120 - FW_DM LINE Jockey -1743 2949 2188 8 663 6646 3 0 0 chrUextra 10317638 10318398 -18686258 - Invader1_I LTR Gypsy -673 2513 1754 8 663 3379 201 11 7 chrUextra 10318498 10319260 -18685396 - Stalker2_I LTR Gypsy -2748 4654 3890 8 663 2512 65 3 0 chrUextra 10319360 10319715 -18684941 - XDMR Unknown Unknown -5 356 1 8 663 2498 64 6 0 chrUextra 10319715 10320074 -18684582 - XDMR Unknown Unknown 0 361 1 8 663 513 200 41 61 chrUextra 10319915 10320112 -18684544 + SAR_DM Satellite Satellite 200 392 -1080 8 663 422 34 0 17 chrUextra 10320062 10320122 -18684534 - XDMR_DM Unknown Unknown -18 342 284 8 663 1193 65 0 6 chrUextra 10320224 10320393 -18684263 + (TATTG)n Simple_repeat Simple_repeat 2 169 0 8 663 5124 86 64 11 chrUextra 10321084 10321846 -18682810 + Gypsy12_I LTR Gypsy 4445 5247 -299 8 663 3431 0 2 0 chrUextra 10321946 10322339 -18682317 - LSU-rRNA_Dme rRNA rRNA -1719 2181 1788 8 663 2729 0 6 3 chrUextra 10322383 10322708 -18681948 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1463 8 663 504 88 0 0 chrUextra 10322808 10322888 -18681768 - ROO_I LTR Pao -2745 5511 5432 8 663 5333 24 41 0 chrUextra 10322870 10323570 -18681086 - ROO_I LTR Pao -2970 5286 4558 8 663 2827 45 5 16 chrUextra 10323670 10324058 -18680598 + BATUMI_I LTR Pao 6618 7001 -962 8 663 2779 78 20 8 chrUextra 10324018 10324432 -18680224 - BATUMI_I LTR Pao -1543 6420 6068 8 663 6505 11 0 0 chrUextra 10324532 10325294 -18679362 - Copia2_I LTR Copia -23 4139 3378 8 663 6328 7 0 0 chrUextra 10325394 10326156 -18678500 + Invader2_I LTR Gypsy 1849 2610 -1982 8 663 991 71 49 103 chrUextra 10326256 10326459 -18678197 + Gypsy6_LTR LTR Gypsy 213 404 -3 8 663 1536 0 0 0 chrUextra 10326459 10326631 -18678025 + SSU-rRNA_Dme rRNA rRNA 1824 1995 0 8 663 21 89 0 0 chrUextra 10326650 10326706 -18677950 + AT_rich Low_complexity Low_complexity 1 56 0 8 663 6596 3 0 0 chrUextra 10327118 10327880 -18676776 + Gypsy4_I LTR Gypsy 1425 2186 -4102 8 663 1134 29 0 0 chrUextra 10327980 10328118 -18676538 + (TATAA)n Simple_repeat Simple_repeat 1 138 0 8 663 2208 25 0 27 chrUextra 10328118 10328409 -18676247 - BATUMI_I LTR Pao -679 7284 7002 8 663 2783 3 0 6 chrUextra 10328409 10328742 -18675914 - BATUMI_I LTR Pao 0 7963 7633 8 663 6439 3 4 1 chrUextra 10328842 10329604 -18675052 - LSU-rRNA_Dme rRNA rRNA -2552 1348 585 8 663 2027 279 16 16 chrUextra 10329713 10330464 -18674192 + FROGGER_I LTR Copia 1148 1898 -179 8 663 6124 21 4 1 chrUextra 10330566 10331328 -18673328 - R1_DM LINE R1 -1325 4031 3268 8 663 200 0 100 0 chrUextra 10331819 10331859 -18672797 + (TA)n Simple_repeat Simple_repeat 1 44 0 8 663 3298 171 12 8 chrUextra 10332293 10333041 -18671615 + SAR_DM Satellite Satellite 326 1076 -396 8 663 40 21 0 0 chrUextra 10333365 10333412 -18671244 + AT_rich Low_complexity Low_complexity 1 47 0 8 663 1414 23 140 32 chrUextra 10333428 10333678 -18670978 - Gypsy4_I LTR Gypsy -5911 377 1 8 663 1607 53 8 47 chrUextra 10333678 10333914 -18670742 - Gypsy4_LTR LTR Gypsy 0 287 61 8 663 240 100 0 0 chrUextra 10334389 10334429 -18670227 + (A)n Simple_repeat Simple_repeat 1 40 0 8 663 1834 301 10 10 chrUextra 10334934 10335638 -18669018 - MICROPIA_I LTR Gypsy -1828 2648 1945 8 663 5834 22 7 29 chrUextra 10335738 10336500 -18668156 - Gypsy12_LTR LTR Gypsy -31 2305 1561 8 663 1135 149 67 13 chrUextra 10336600 10336824 -18667832 + Gypsy12_LTR LTR Gypsy 2101 2336 0 8 663 3005 100 43 30 chrUextra 10336824 10337362 -18667294 + Gypsy12_I LTR Gypsy 1 545 -5001 8 663 2405 103 13 11 chrUextra 10337469 10338224 -18666432 + DMSAT6 Satellite Satellite 1 756 -74 8 663 6554 5 0 0 chrUextra 10338325 10339086 -18665570 - R1_DM LINE R1 -571 4785 4025 8 663 6525 0 3 0 chrUextra 10339186 10339948 -18664708 - Stalker2_I LTR Gypsy -6636 766 3 8 663 1625 5 0 0 chrUextra 10340048 10340234 -18664422 + PROTOP_A DNA P 920 1105 0 8 663 4326 25 59 23 chrUextra 10340234 10340810 -18663846 + CIRCE LINE Composite 2424 3020 -3336 8 663 2952 3 3 3 chrUextra 10340910 10341258 -18663398 - LSU-rRNA_Dme rRNA rRNA -913 2987 2640 8 663 3601 2 0 0 chrUextra 10341256 10341672 -18662984 - R1_DM LINE R1 0 5356 4941 8 663 3354 108 0 9 chrUextra 10341772 10342296 -18662360 - DMRT1B LINE R1 -1531 3652 3134 8 663 477 285 67 0 chrUextra 10342327 10342492 -18662164 + Gypsy12_I LTR Gypsy 3154 3329 -2217 8 663 497 126 0 11 chrUextra 10342736 10342824 -18661832 + G3_DM LINE Jockey 103 189 -4416 8 663 359 138 92 0 chrUextra 10342919 10342984 -18661672 + G3_DM LINE Jockey 509 579 -4026 8 663 572 81 115 0 chrUextra 10343496 10343583 -18661073 + ACCORD2_I LTR Gypsy 7108 7204 -8 8 663 585 195 76 19 chrUextra 10343644 10343801 -18660855 + ACCORD2_LTR LTR Gypsy 45 210 -5 8 663 46 0 0 0 chrUextra 10343991 10344037 -18660619 + AT_rich Low_complexity Low_complexity 1 46 0 8 663 1371 24 0 0 chrUextra 10344358 10344525 -18660131 + (TATAA)n Simple_repeat Simple_repeat 2 168 0 8 663 2690 30 0 0 chrUextra 10344525 10344856 -18659800 - DM1731_LTR LTR Copia -1 335 5 8 663 1538 23 0 4 chrUextra 10344856 10345120 -18659536 + (TATAA)n Simple_repeat Simple_repeat 1 262 0 8 663 3264 24 15 0 chrUextra 10346081 10346490 -18658166 + DMCR1A LINE CR1 2930 3344 -1126 8 663 2482 33 91 0 chrUextra 10346512 10346842 -18657814 + DMCR1A LINE CR1 3411 3770 -700 8 663 2259 85 10 0 chrUextra 10346942 10347322 -18657334 - HETA LINE telomeric -9 6072 5745 8 663 385 109 86 11 chrUextra 10347315 10347408 -18657248 - TART LINE telomeric -4851 9626 9527 8 663 208 200 31 0 chrUextra 10347591 10347656 -18657000 + (TAA)n Simple_repeat Simple_repeat 2 68 0 8 663 3391 172 9 7 chrUextra 10347803 10348552 -18656104 - SAR_DM Satellite Satellite -396 1076 326 8 663 5755 14 3 8 chrUextra 10348664 10349391 -18655265 - STALKER4_I LTR Gypsy -4744 1786 1064 8 663 3360 163 9 20 chrUextra 10349527 10350286 -18654370 - SAR_DM Satellite Satellite -353 1119 369 8 663 1915 171 5 5 chrUextra 10350395 10351147 -18653509 + SAR_DM Satellite Satellite 1 752 -581 8 663 6413 1 3 5 chrUextra 10351247 10352005 -18652651 + LSU-rRNA_Dme rRNA rRNA 884 1639 -2261 8 663 6488 5 0 0 chrUextra 10352108 10352869 -18651787 + DM176_I LTR Gypsy 3787 4547 -1873 8 663 888 80 0 0 chrUextra 10352971 10353109 -18651547 + ARS406_DM Unknown Unknown 22 159 -194 8 663 1773 166 25 10 chrUextra 10353115 10353728 -18650928 - SAR_DM Satellite Satellite -569 622 1 8 663 28 48 0 0 chrUextra 10353983 10354025 -18650631 + AT_rich Low_complexity Low_complexity 1 42 0 8 663 486 129 24 0 chrUextra 10354298 10354383 -18650273 - NTS_DM Other Other -150 90 4 8 663 667 11 0 31 chrUextra 10354493 10354591 -18650065 - NTS_DM Other Other -78 162 68 8 664 6243 17 3 0 chrUextra 10354691 10355452 -18649204 + DOC2_DM LINE Jockey 2684 3446 -1347 8 664 5271 2 0 0 chrUextra 10355552 10356159 -18648497 - Copia_I LTR Copia -3986 607 1 8 664 1280 0 0 0 chrUextra 10356159 10356313 -18648343 - Copia_LTR LTR Copia 0 276 123 8 664 6102 16 8 5 chrUextra 10357275 10358035 -18646621 - LSU-rRNA_Dme rRNA rRNA -2132 1768 1007 8 664 5659 3 0 0 chrUextra 10358135 10358783 -18645873 - MICROPIA_I LTR Gypsy -3828 648 1 8 664 925 0 0 9 chrUextra 10358783 10358893 -18645763 - MICROPIA_LTR LTR Gypsy 0 476 368 8 664 2025 0 0 0 chrUextra 10359056 10359296 -18645360 - ALUII_DM Unknown Unknown 0 240 1 8 664 21 57 0 0 chrUextra 10359296 10359331 -18645325 + AT_rich Low_complexity Low_complexity 1 35 0 8 664 22 35 0 0 chrUextra 10359528 10359557 -18645099 + AT_rich Low_complexity Low_complexity 1 29 0 8 664 36 40 0 0 chrUextra 10359658 10359708 -18644948 + AT_rich Low_complexity Low_complexity 1 50 0 8 664 6041 17 21 0 chrUextra 10359857 10360616 -18644040 - DM176_I LTR Gypsy -4280 2140 1366 8 664 2969 185 17 27 chrUextra 10360718 10361474 -18643182 + SAR_DM Satellite Satellite 1 748 -216 8 664 2274 184 11 9 chrUextra 10361579 10362335 -18642321 - SAR_DM Satellite Satellite -691 756 1 8 664 285 236 45 45 chrUextra 10362565 10362698 -18641958 - Invader6_I LTR Gypsy -3027 1072 940 8 664 324 282 30 8 chrUextra 10362805 10362937 -18641719 - Invader4_I LTR Gypsy -2278 135 1 8 664 2762 165 44 24 chrUextra 10364264 10364923 -18639733 + TART LINE telomeric 8869 9540 -4937 8 664 21 89 0 0 chrUextra 10365130 10365186 -18639470 + AT_rich Low_complexity Low_complexity 1 56 0 8 664 5004 0 3 2 chrUextra 10365205 10365784 -18638872 - SSU-rRNA_Dme rRNA rRNA 0 1995 1416 8 664 411 244 112 4 chrUextra 10365910 10366151 -18638505 - Gypsy8_I LTR Gypsy -4570 2083 1857 8 664 1403 88 15 0 chrUextra 10366146 10366350 -18638306 - Gypsy8_I LTR Gypsy -3867 480 274 8 664 1267 101 16 53 chrUextra 10366318 10366641 -18638015 + DMSAT6 Satellite Satellite 99 409 -61 8 664 34 24 0 0 chrUextra 10367138 10367179 -18637477 + AT_rich Low_complexity Low_complexity 1 41 0 8 664 21 95 0 0 chrUextra 10367392 10367455 -18637201 + AT_rich Low_complexity Low_complexity 1 63 0 8 664 327 0 0 0 chrUextra 10367467 10367506 -18637150 + LSU-rRNA_Dme rRNA rRNA 1 39 -3861 8 664 3130 188 14 22 chrUextra 10367606 10368367 -18636289 + SAR_DM Satellite Satellite 1 755 -227 8 664 6392 7 4 7 chrUextra 10368467 10369228 -18635428 - DM1731_I LTR Copia -36 3940 3182 8 664 6022 4 0 0 chrUextra 10369328 10370024 -18634632 + Copia2_I LTR Copia 3467 4162 0 8 664 496 0 0 0 chrUextra 10370024 10370089 -18634567 + Copia2_LTR_DM LTR Copia 1 65 -133 8 664 3359 17 0 0 chrUextra 10371050 10371453 -18633203 - PROTOP_A DNA P -702 403 1 8 664 2245 85 30 55 chrUextra 10371453 10371811 -18632845 + Gypsy12_I LTR Gypsy 4568 4916 -630 8 664 3362 32 214 2 chrUextra 10372176 10372672 -18631984 - DIVER2_I LTR Pao -1705 2442 1842 8 664 6492 17 1 0 chrUextra 10372772 10373533 -18631123 + R2_DM LINE R2 1050 1811 -1796 8 664 5754 25 26 0 chrUextra 10373633 10374394 -18630262 + IVK_DM LINE I 984 1764 -3638 8 664 6079 25 50 0 chrUextra 10374494 10375255 -18629401 - MAX_I LTR Pao -1577 6337 5539 8 664 25 31 0 0 chrUextra 10375508 10375540 -18629116 + AT_rich Low_complexity Low_complexity 1 32 0 8 664 4408 18 39 0 chrUextra 10375572 10376116 -18628540 + G2_DM LINE Jockey 1523 2087 -1015 8 664 1837 0 0 0 chrUextra 10376216 10376425 -18628231 - LSU-rRNA_Dme rRNA rRNA -1904 1996 1788 8 664 4208 2 6 6 chrUextra 10376469 10376977 -18627679 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1281 8 664 719 287 66 49 chrUextra 10377177 10377836 -18626820 + TABOR_I LTR Gypsy 2344 3432 -3465 8 664 2832 173 11 9 chrUextra 10377938 10378584 -18626072 - SAR_DM Satellite Satellite -500 972 326 8 664 736 0 0 0 chrUextra 10378612 10378699 -18625957 + FW_DM LINE Jockey 515 601 -4091 8 664 32 0 0 0 chrUextra 10378864 10378896 -18625760 + AT_rich Low_complexity Low_complexity 1 32 0 8 664 4677 2 0 0 chrUextra 10379028 10379560 -18625096 + SSU-rRNA_Dme rRNA rRNA 1 532 -1463 8 664 362 0 0 0 chrUextra 10379660 10379701 -18624955 - NTS_DM Other Other -162 78 38 8 664 870 9 0 27 chrUextra 10379701 10379813 -18624843 - NTS_DM Other Other -107 133 25 8 664 22 56 0 0 chrUextra 10379839 10379875 -18624781 + AT_rich Low_complexity Low_complexity 1 36 0 8 664 230 150 0 0 chrUextra 10379888 10379928 -18624728 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 664 246 150 0 0 chrUextra 10379971 10380011 -18624645 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 664 246 150 0 0 chrUextra 10380063 10380103 -18624553 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 664 246 150 0 0 chrUextra 10380155 10380195 -18624461 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 664 22 56 0 0 chrUextra 10380200 10380236 -18624420 + AT_rich Low_complexity Low_complexity 1 36 0 8 664 951 0 0 0 chrUextra 10380313 10380421 -18624235 - LSU-rRNA_Dme rRNA rRNA 0 3900 3793 8 664 2960 67 26 0 chrUextra 10380521 10380938 -18623718 + R1_DM LINE R1 306 733 -4623 8 664 2723 55 0 0 chrUextra 10380934 10381282 -18623374 + R1_DM LINE R1 1224 1571 -3785 8 664 6526 9 3 0 chrUextra 10381382 10382143 -18622513 - Gypsy6_I LTR Gypsy -3223 3789 3027 8 664 6265 8 4 0 chrUextra 10382243 10383004 -18621652 + STALKER4_I LTR Gypsy 4732 5495 -1035 8 664 2898 63 5 17 chrUextra 10383458 10383864 -18620792 + Baggins1 LINE LOA 4791 5191 -262 8 664 6282 11 17 7 chrUextra 10383965 10384723 -18619933 - Gypsy4_I LTR Gypsy -3990 2298 1533 8 664 895 252 135 34 chrUextra 10384827 10385530 -18619126 - ROVER-I_DM LTR Gypsy -5413 1171 398 8 664 5947 35 0 0 chrUextra 10385687 10386429 -18618227 + TART_B1 LINE telomeric 3030 3771 -6883 8 664 1779 119 37 28 chrUextra 10386548 10386901 -18617755 + Stalker2_I LTR Gypsy 538 893 -6509 8 664 2441 153 104 0 chrUextra 10387545 10387995 -18616661 + Gypsy_I LTR Gypsy 3936 4432 -2075 8 664 592 174 52 40 chrUextra 10387996 10388170 -18616486 - G_DM LINE Jockey -9 4337 4162 8 664 1669 0 0 10 chrUextra 10388270 10388472 -18616184 - BATUMI_I LTR Pao -5 7958 7759 8 664 3305 44 25 0 chrUextra 10388480 10388915 -18615741 - ROO_I LTR Pao -337 7919 7474 8 664 881 27 9 0 chrUextra 10388908 10389019 -18615637 - ROO_I LTR Pao -1000 7256 7145 8 664 957 0 9 0 chrUextra 10389132 10389246 -18615410 - NTS_DM Other Other -125 115 1 8 664 1825 8 17 13 chrUextra 10389246 10389485 -18615171 - NTS_DM Other Other 0 240 1 8 664 1756 17 17 17 chrUextra 10389485 10389725 -18614931 - NTS_DM Other Other 0 240 1 8 664 1082 18 24 24 chrUextra 10389725 10389892 -18614764 - NTS_DM Other Other 0 240 74 8 664 6446 3 1 3 chrUextra 10389992 10390753 -18613903 - R1_DM LINE R1 -860 4496 3737 8 664 6319 17 3 0 chrUextra 10390853 10391614 -18613042 + DMRT1B LINE R1 2709 3471 -1712 8 664 28 48 0 0 chrUextra 10391936 10391978 -18612678 + AT_rich Low_complexity Low_complexity 1 42 0 8 664 488 119 36 0 chrUextra 10392251 10392335 -18612321 - NTS_DM Other Other -150 90 4 8 664 6273 20 8 0 chrUextra 10392575 10393334 -18611322 + Copia2_I LTR Copia 2134 2898 -1264 8 664 686 269 0 0 chrUextra 10393556 10393738 -18610918 + Gypsy3_I LTR Gypsy 2578 2759 -3418 8 664 820 182 0 0 chrUextra 10393733 10393887 -18610769 + Gypsy6_I LTR Gypsy 4549 4702 -2310 8 664 672 273 0 0 chrUextra 10393889 10394072 -18610584 + Gypsy3_I LTR Gypsy 2577 2759 -3418 8 664 606 215 0 0 chrUextra 10394067 10394197 -18610459 + Gypsy6_I LTR Gypsy 4549 4678 -2334 8 664 3418 164 14 13 chrUextra 10394297 10395056 -18609600 - SAR_DM Satellite Satellite -441 1031 272 8 664 321 109 0 18 chrUextra 10395338 10395394 -18609262 + SAR_DM Satellite Satellite 444 498 -974 8 664 350 44 0 0 chrUextra 10395350 10395395 -18609261 - ARS406_DM Unknown Unknown -164 189 145 8 664 1350 23 0 0 chrUextra 10395414 10395587 -18609069 - ARS406_DM Unknown Unknown -180 173 1 8 664 282 252 0 18 chrUextra 10395491 10395604 -18609052 + SAR_DM Satellite Satellite 192 302 -1170 8 664 6527 3 0 3 chrUextra 10396019 10396780 -18607876 + G_DM LINE Jockey 2546 3304 -1042 8 664 4389 6 0 8 chrUextra 10396880 10397410 -18607246 + LINEJ1_DM LINE Jockey 4482 5007 -13 8 664 28 71 0 0 chrUextra 10397488 10397544 -18607112 + AT_rich Low_complexity Low_complexity 1 56 0 8 664 29 47 0 0 chrUextra 10397582 10397625 -18607031 + AT_rich Low_complexity Low_complexity 1 43 0 8 664 492 311 21 18 chrUextra 10398220 10398502 -18606154 - Gypsy4_I LTR Gypsy -2815 3473 3191 8 664 671 64 0 0 chrUextra 10398602 10398696 -18605960 + ROO_LTR LTR Pao 335 428 0 8 664 249 133 44 0 chrUextra 10398729 10398774 -18605882 + ROO_I LTR Pao 114 160 -8096 8 664 4900 7 5 0 chrUextra 10398773 10399362 -18605294 - DOC LINE Jockey 0 4725 4134 8 664 5548 0 1 0 chrUextra 10399463 10400134 -18604522 + ROO_I LTR Pao 7585 8256 0 8 664 767 0 0 0 chrUextra 10400134 10400224 -18604432 + ROO_LTR LTR Pao 1 90 -338 8 664 29 0 0 0 chrUextra 10400612 10400641 -18604015 + AT_rich Low_complexity Low_complexity 1 29 0 8 664 21 0 0 0 chrUextra 10400662 10400683 -18603973 + AT_rich Low_complexity Low_complexity 1 21 0 8 664 37 23 0 0 chrUextra 10400774 10400818 -18603838 + AT_rich Low_complexity Low_complexity 1 44 0 8 664 21 0 0 0 chrUextra 10400839 10400860 -18603796 + AT_rich Low_complexity Low_complexity 1 21 0 8 664 1276 193 11 24 chrUextra 10401194 10401481 -18603175 - Gypsy12_LTR LTR Gypsy -2041 295 13 8 664 2954 80 108 7 chrUextra 10401493 10401946 -18602710 - Gypsy12_I LTR Gypsy 0 5546 5048 8 664 5231 2 3 0 chrUextra 10402046 10402650 -18602006 - LSU-rRNA_Dme rRNA rRNA -655 3245 2640 8 664 1401 0 0 0 chrUextra 10402648 10402807 -18601849 - R1_DM LINE R1 0 5356 5198 8 664 693 103 241 0 chrUextra 10403134 10403279 -18601377 + FB4_DM DNA Tc1 3 182 -3907 8 664 250 33 0 0 chrUextra 10403287 10403317 -18601339 - Baggins1 LINE LOA -697 4756 4727 8 664 27 29 0 0 chrUextra 10403556 10403590 -18601066 + AT_rich Low_complexity Low_complexity 1 34 0 8 664 6242 17 3 0 chrUextra 10403768 10404529 -18600127 + PROTOP DNA P 1968 2730 -1750 8 664 2824 182 61 23 chrUextra 10404629 10405380 -18599276 + SAR_DM Satellite Satellite 438 1217 -255 8 664 457 67 0 0 chrUextra 10405330 10405390 -18599266 - ARS406_DM Unknown Unknown -164 189 130 8 664 1359 38 22 5 chrUextra 10405490 10405674 -18598982 - TART LINE telomeric -12246 2231 2045 8 664 3936 60 131 0 chrUextra 10405665 10406251 -18598405 - TART LINE telomeric -12618 1859 1197 8 664 2361 67 37 6 chrUextra 10406351 10406699 -18597957 - CIRCE LINE Composite -1017 5339 4981 8 664 506 17 0 0 chrUextra 10407053 10407112 -18597544 - CIRCE LINE Composite -1376 4980 4922 8 664 649 234 79 0 chrUextra 10407216 10407430 -18597226 + Invader5_I LTR Gypsy 1435 1665 -1669 8 664 889 146 135 3 chrUextra 10407428 10407615 -18597041 + Invader1_I LTR Gypsy 1429 1623 -1563 8 664 3594 0 0 0 chrUextra 10408073 10408497 -18596159 + HMSBEAGLE_I LTR Gypsy 6106 6529 0 8 664 2291 11 0 0 chrUextra 10408497 10408763 -18595893 + DMLTR5 LTR Gypsy 1 266 0 8 664 207 225 0 0 chrUextra 10408763 10408834 -18595822 + (TA)n Simple_repeat Simple_repeat 2 72 0 8 664 3792 95 70 105 chrUextra 10408934 10409695 -18594961 - Gypsy12_I LTR Gypsy -3789 1757 1024 8 664 6304 11 0 0 chrUextra 10409795 10410556 -18594100 - Invader2_I LTR Gypsy -1325 3267 2507 8 664 6646 0 1 1 chrUextra 10410656 10411417 -18593239 + LSU-rRNA_Dme rRNA rRNA 3066 3826 -74 8 664 4364 19 0 0 chrUextra 10411517 10412043 -18592613 - PROTOP_A DNA P -579 526 1 8 664 2904 189 24 14 chrUextra 10412379 10413139 -18591517 + SAR_DM Satellite Satellite 191 957 -515 8 664 2856 189 13 17 chrUextra 10413240 10413999 -18590657 + SAR_DM Satellite Satellite 1 756 -255 8 664 6246 24 0 0 chrUextra 10414100 10414861 -18589795 + R1_DM LINE R1 2068 2828 -2528 8 664 5466 14 21 22 chrUextra 10414961 10415685 -18588971 - ROO_I LTR Pao -7533 723 1 8 664 278 54 0 0 chrUextra 10415685 10415722 -18588934 - ROO_LTR LTR Pao 0 428 392 8 664 335 296 19 19 chrUextra 10415867 10416029 -18588627 - MDG3_I LTR Gypsy -1562 3424 3263 8 664 296 321 7 7 chrUextra 10416315 10416456 -18588200 - Invader2_I LTR Gypsy -1843 2749 2624 8 664 6466 11 0 0 chrUextra 10417544 10418305 -18586351 - DMRT1A LINE R1 -2281 2902 2142 8 664 572 176 55 21 chrUextra 10419266 10419411 -18585245 + TART LINE telomeric 9417 9566 -4911 8 664 3340 104 154 15 chrUextra 10419410 10420027 -18584629 + HETA LINE telomeric 7123 7825 -6652 8 664 6439 3 0 0 chrUextra 10420127 10420888 -18583768 + STALKER4_I LTR Gypsy 2487 3247 -3283 8 664 6159 0 28 0 chrUextra 10421849 10422610 -18582046 - ROO_I LTR Pao -7293 963 182 8 664 6242 8 0 0 chrUextra 10422714 10423470 -18581186 + STALKER4_I LTR Gypsy 2685 3440 -3090 8 664 4741 32 28 34 chrUextra 10423597 10424330 -18580326 + HETA LINE telomeric 3808 4386 -1695 8 664 2349 27 3 23 chrUextra 10424430 10424738 -18579918 + G5_DM LINE Jockey 4555 4856 0 8 664 774 76 0 18 chrUextra 10424742 10425190 -18579466 - RSP Satellite Satellite -13 440 1 8 664 2290 101 55 15 chrUextra 10425291 10426035 -18578621 + DMSAT6 Satellite Satellite 1 774 -40 8 664 4682 95 108 17 chrUextra 10426150 10426910 -18577746 + Gypsy12_I LTR Gypsy 4624 5452 -94 8 664 1077 265 40 6 chrUextra 10427010 10427333 -18577323 - BS2 LINE Jockey -1667 3054 2721 8 664 1164 167 104 20 chrUextra 10427334 10427633 -18577023 - MDG1_LTR LTR Gypsy -30 412 89 8 664 1031 23 0 22 chrUextra 10427635 10427770 -18576886 + (TTA)n Simple_repeat Simple_repeat 1 132 0 8 664 6394 3 5 0 chrUextra 10427870 10428630 -18576026 + ROO_I LTR Pao 1323 2086 -6170 8 664 6359 1 18 0 chrUextra 10428730 10429490 -18575166 + ROO_I LTR Pao 5812 6585 -1671 8 664 6484 3 1 4 chrUextra 10429590 10430350 -18574306 - SSU-rRNA_Dme rRNA rRNA -535 1460 703 8 664 5712 29 34 16 chrUextra 10431310 10432070 -18572586 - DIVER2_I LTR Pao -1582 2565 1792 8 664 6431 1 0 1 chrUextra 10432174 10432930 -18571726 - ROO_I LTR Pao -6265 1991 1237 8 664 25 0 0 0 chrUextra 10433166 10433191 -18571465 + AT_rich Low_complexity Low_complexity 1 25 0 8 664 1827 5 5 0 chrUextra 10433572 10433790 -18570866 + IDEFIX_I LTR Gypsy 1 219 -5409 8 664 945 0 0 0 chrUextra 10433890 10434000 -18570656 - LSU-rRNA_Dme rRNA rRNA -3790 110 1 8 664 34 24 0 0 chrUextra 10434289 10434330 -18570326 + AT_rich Low_complexity Low_complexity 1 41 0 8 664 774 142 45 0 chrUextra 10434750 10434884 -18569772 - DNAREP1_DM LINE Penelope -151 443 304 8 664 1109 22 0 0 chrUextra 10435610 10435747 -18568909 + R1_DM LINE R1 4930 5066 -290 8 664 954 26 0 0 chrUextra 10435744 10435858 -18568798 + R1_DM LINE R1 5243 5356 0 8 664 3107 67 5 7 chrUextra 10435891 10436327 -18568329 + R1_DM LINE R1 1 435 -4921 8 664 337 21 42 0 chrUextra 10436322 10436370 -18568286 + R1_DM LINE R1 1101 1150 -4206 8 664 4838 70 70 0 chrUextra 10436470 10437230 -18567426 + STALKER4_I LTR Gypsy 4614 5426 -1104 8 664 6167 16 0 0 chrUextra 10437330 10438090 -18566566 + ROO_I LTR Pao 2774 3533 -4723 8 664 2996 189 9 13 chrUextra 10438195 10438945 -18565711 - SAR_DM Satellite Satellite -514 958 212 8 664 1930 0 0 0 chrUextra 10439074 10439296 -18565360 - LSU-rRNA_Dme rRNA rRNA -3678 222 1 8 664 21 95 0 0 chrUextra 10439308 10439371 -18565285 + AT_rich Low_complexity Low_complexity 1 63 0 8 664 34 24 0 0 chrUextra 10439585 10439626 -18565030 + AT_rich Low_complexity Low_complexity 1 41 0 8 664 1754 128 22 0 chrUextra 10439910 10440268 -18564388 - TART_B1 LINE telomeric -8438 2216 1851 8 664 3298 20 2 0 chrUextra 10440268 10440670 -18563986 + PROTOP_A DNA P 1 403 -702 8 664 21 0 0 0 chrUextra 10440898 10440919 -18563737 + AT_rich Low_complexity Low_complexity 1 21 0 8 664 1262 48 0 0 chrUextra 10440950 10441116 -18563540 + Gypsy10_LTR LTR Gypsy 1 166 -198 8 664 2867 201 20 22 chrUextra 10441638 10442388 -18562268 - SAR_DM Satellite Satellite -569 748 1 8 664 30 45 0 0 chrUextra 10442533 10442577 -18562079 + AT_rich Low_complexity Low_complexity 1 44 0 8 664 690 50 60 0 chrUextra 10442726 10442826 -18561830 - DNAREP1_DM LINE Penelope -488 106 1 8 664 50 80 0 0 chrUextra 10442899 10443012 -18561644 + AT_rich Low_complexity Low_complexity 1 113 0 8 664 2606 92 28 46 chrUextra 10443350 10444101 -18560555 - DMSAT6 Satellite Satellite -85 737 1 8 664 2180 164 33 12 chrUextra 10444210 10444703 -18559953 - TART LINE telomeric -5095 9382 8954 8 664 22 56 0 0 chrUextra 10444847 10444883 -18559773 + AT_rich Low_complexity Low_complexity 1 36 0 8 664 5544 99 1 3 chrUextra 10445070 10445830 -18558826 + HETA LINE telomeric 1729 2487 -3594 8 664 3403 33 22 20 chrUextra 10445957 10446690 -18557966 - HETRP_DM Satellite Satellite -916 734 1 8 664 3560 186 8 8 chrUextra 10446792 10447550 -18557106 - SAR_DM Satellite Satellite -443 1029 272 8 664 3343 175 15 23 chrUextra 10447652 10448393 -18556263 + SAR_DM Satellite Satellite 425 1159 -313 8 664 6698 18 21 0 chrUextra 10448510 10449270 -18555386 - R1_DM LINE R1 -2639 2717 1942 8 664 3633 181 13 9 chrUextra 10449371 10450130 -18554526 + SAR_DM Satellite Satellite 257 1018 -454 8 664 236 0 0 0 chrUextra 10450230 10450256 -18554400 - LSU-rRNA_Dme rRNA rRNA -3874 26 1 8 664 21 95 0 0 chrUextra 10450268 10450331 -18554325 + AT_rich Low_complexity Low_complexity 1 63 0 8 664 34 24 0 0 chrUextra 10450544 10450585 -18554071 + AT_rich Low_complexity Low_complexity 1 41 0 8 664 7007 0 0 0 chrUextra 10451090 10451850 -18552806 + DOC LINE Jockey 264 1023 -3702 8 664 6744 12 1 1 chrUextra 10451950 10452710 -18551946 - Gypsy4_I LTR Gypsy -496 5792 5033 8 664 6217 3 3 60 chrUextra 10452810 10453570 -18551086 - LSU-rRNA_Dme rRNA rRNA -1647 2253 1538 8 664 6384 19 88 0 chrUextra 10453670 10454430 -18550226 - R1_DM LINE R1 -144 5212 4386 8 664 342 211 105 0 chrUextra 10454632 10454727 -18549929 - ROVER-I_DM LTR Gypsy -6479 105 1 8 664 2043 81 51 70 chrUextra 10454727 10455101 -18549555 - ROVER-LTR_DM LTR Gypsy 0 367 1 8 664 1649 26 0 0 chrUextra 10455101 10455290 -18549366 - CIRCE LINE Composite -1983 4373 4185 8 664 2921 215 26 9 chrUextra 10455390 10456146 -18548510 + SAR_DM Satellite Satellite 438 1206 -266 8 664 4798 4 70 3 chrUextra 10456250 10457010 -18547646 - BS2 LINE Jockey -996 3725 2915 8 664 3739 128 1 1 chrUextra 10457111 10457870 -18546786 + Gypsy2_I LTR Gypsy 4097 5281 -1731 8 664 1084 77 22 196 chrUextra 10457970 10458246 -18546410 + FB4_DM DNA Tc1 842 1069 -3020 8 664 983 146 93 43 chrUextra 10458300 10458558 -18546098 + FB4_DM DNA Tc1 2775 3045 -1044 8 664 269 61 0 0 chrUextra 10458553 10458586 -18546070 - FB4_DM DNA Tc1 -4020 69 37 8 664 1484 6 0 63 chrUextra 10458839 10459028 -18545628 - CIRCE LINE Composite -2228 4128 3952 8 664 2291 12 0 8 chrUextra 10459023 10459282 -18545374 - CIRCE LINE Composite -2584 3772 3516 8 664 452 125 14 0 chrUextra 10459374 10459446 -18545210 - Gypsy8_LTR LTR Gypsy -231 73 1 8 664 893 82 7 49 chrUextra 10459448 10459590 -18545066 - Invader2_I LTR Gypsy -567 4025 3890 8 664 6955 0 0 0 chrUextra 10459690 10460450 -18544206 - QUASIMODO_I LTR Gypsy -3521 2539 1780 8 664 6895 11 0 0 chrUextra 10460550 10461309 -18543347 - R1_DM LINE R1 -1549 3807 3049 8 664 6584 24 1 1 chrUextra 10461410 10462170 -18542486 - R1_DM LINE R1 -1170 4186 3427 8 664 6500 30 0 3 chrUextra 10462270 10463030 -18541626 + R1_DM LINE R1 2198 2955 -2401 8 664 5312 5 62 4 chrUextra 10463130 10463890 -18540766 + STALKER4_I LTR Gypsy 2970 3773 -2757 8 664 3687 25 22 5 chrUextra 10463990 10464437 -18540219 - BATUMI_I LTR Pao -7508 455 1 8 664 2118 26 30 15 chrUextra 10464437 10464705 -18539951 - BATUMI_LTR LTR Pao 0 272 1 8 664 31 0 0 0 chrUextra 10464870 10464901 -18539755 + AT_rich Low_complexity Low_complexity 1 31 0 8 664 453 82 0 0 chrUextra 10465193 10465252 -18539404 - PROTOP DNA P -1 4479 4420 8 664 1574 59 45 0 chrUextra 10465252 10465454 -18539202 + PROTOP_B DNA P 1 211 -942 8 664 1138 31 0 0 chrUextra 10465481 10465610 -18539046 - PROTOP DNA P -76 4404 4276 8 664 6738 22 0 0 chrUextra 10465710 10466470 -18538186 - R1_DM LINE R1 -2832 2524 1765 8 664 3619 112 96 30 chrUextra 10466578 10467330 -18537326 + TAHRE LINE telomeric 9843 10452 -11 8 664 369 171 0 0 chrUextra 10467432 10467520 -18537136 + GA-rich Low_complexity Low_complexity 1 88 0 8 664 1602 0 0 0 chrUextra 10467522 10467700 -18536956 + (GAGAA)n Simple_repeat Simple_repeat 1 178 0 8 664 6017 48 0 1 chrUextra 10468290 10469050 -18535606 - IDEFIX_I LTR Gypsy -1105 4523 3765 8 664 1859 94 0 15 chrUextra 10469150 10469419 -18535237 + IDEFIX_I LTR Gypsy 2845 3109 -2519 8 664 3235 84 8 6 chrUextra 10469433 10469910 -18534746 + IDEFIX_I LTR Gypsy 3381 3858 -1770 8 664 4180 0 2 0 chrUextra 10470010 10470511 -18534145 - DM176_I LTR Gypsy -324 6096 5595 8 664 2238 4 0 0 chrUextra 10470510 10470770 -18533886 - DM176_I LTR Gypsy -1464 4956 4697 8 664 228 292 85 0 chrUextra 10470873 10470979 -18533677 - QUASIMODO_I LTR Gypsy -3008 3052 2938 8 664 22 35 0 0 chrUextra 10471035 10471064 -18533592 + AT_rich Low_complexity Low_complexity 1 29 0 8 664 181 77 0 71 chrUextra 10471096 10471138 -18533518 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 8 664 6500 7 14 0 chrUextra 10471730 10472490 -18532166 + QUASIMODO_I LTR Gypsy 3710 4480 -1580 8 664 6746 8 0 0 chrUextra 10472590 10473350 -18531306 - PROTOP DNA P -689 3791 3032 8 664 5866 42 0 4 chrUextra 10473450 10474151 -18530505 - MAX_I LTR Pao -4749 3165 2468 8 664 684 25 0 0 chrUextra 10474129 10474210 -18530446 - MAX_I LTR Pao -5870 2044 1964 8 664 6565 20 40 1 chrUextra 10475170 10475930 -18528726 - R1_DM LINE R1 -738 4618 3830 8 664 6380 43 4 1 chrUextra 10476030 10476790 -18527866 - R1_DM LINE R1 -3806 1550 789 8 664 4483 33 26 0 chrUextra 10476890 10477434 -18527222 + FW_DM LINE Jockey 4135 4692 0 8 664 273 29 0 0 chrUextra 10477442 10477476 -18527180 - R1_DM LINE R1 -3966 1390 1357 8 664 1430 40 6 6 chrUextra 10477476 10477650 -18527006 - R1_DM LINE R1 -4150 1206 1033 8 664 352 45 0 0 chrUextra 10477750 10477794 -18526862 - ARS406_DM Unknown Unknown -220 133 90 8 664 2871 194 29 27 chrUextra 10477791 10478509 -18526147 + SAR_DM Satellite Satellite 1 719 -203 8 664 1566 26 0 0 chrUextra 10478814 10479123 -18525533 + (CAAGA)n Simple_repeat Simple_repeat 1 309 0 8 664 4766 13 0 0 chrUextra 10479470 10480004 -18524652 + FW_DM LINE Jockey 4158 4691 -1 8 664 670 172 96 38 chrUextra 10480024 10480214 -18524442 + TART LINE telomeric 9364 9542 -4935 8 664 7043 4 0 0 chrUextra 10480330 10481090 -18523566 - DM1731_I LTR Copia -363 3613 2854 8 664 2777 0 0 7 chrUextra 10481190 10481490 -18523166 + BLOOD_LTR LTR Gypsy 102 399 0 8 664 889 44 9 0 chrUextra 10481490 10481589 -18523067 + DM297_I LTR Gypsy 1993 2092 -4075 8 664 2114 8 0 0 chrUextra 10481584 10481826 -18522830 + DM297_I LTR Gypsy 5926 6167 0 8 664 1049 16 8 8 chrUextra 10481827 10481950 -18522706 + DM297_LTR LTR Gypsy 1 123 -291 8 664 1088 180 25 15 chrUextra 10482070 10482810 -18521846 - SAR_DM Satellite Satellite -396 747 1 8 664 2403 19 0 0 chrUextra 10482910 10483181 -18521475 + MDG1_LTR LTR Gypsy 172 442 0 8 664 4482 2 0 0 chrUextra 10483181 10483669 -18520987 + MDG1_I LTR Gypsy 1 488 -6108 8 664 6915 0 3 0 chrUextra 10483773 10484530 -18520126 + DOC LINE Jockey 1101 1859 -2866 8 664 331 323 49 20 chrUextra 10484986 10485180 -18519476 + BLASTOPIA_I LTR Gypsy 3541 3925 -1061 8 10 6905 1 0 0 chrUextra 10485490 10486250 -18518406 + ACCORD2_I LTR Gypsy 2487 3246 -3966 8 665 6890 7 0 1 chrUextra 10486350 10487110 -18517546 - STALKER4_I LTR Gypsy -1688 4842 4084 8 665 6206 44 12 1 chrUextra 10487216 10487970 -18516686 + R1_DM LINE R1 614 1375 -3981 8 665 1478 192 31 63 chrUextra 10488096 10488541 -18516115 + Gypsy_LTR LTR Gypsy 1 431 -51 8 665 597 73 0 12 chrUextra 10488672 10488755 -18515901 + Jockey2 LINE Jockey 1 82 -3346 8 665 357 118 28 42 chrUextra 10488759 10488830 -18515826 + Gypsy5_LTR LTR Gypsy 77 146 -284 8 665 3738 113 42 70 chrUextra 10488930 10489690 -18514966 - PROTOP_B DNA P -183 970 232 8 665 3924 16 0 22 chrUextra 10489790 10490251 -18514405 - DM176_LTR LTR Gypsy -56 451 1 8 665 2328 57 0 0 chrUextra 10490252 10490550 -18514106 - MDG1_I LTR Gypsy -836 5760 5463 8 665 6942 12 0 1 chrUextra 10490650 10491410 -18513246 + Invader1_I LTR Gypsy 3 761 -2425 8 665 3437 166 46 22 chrUextra 10491510 10492270 -18512386 + SAR_DM Satellite Satellite 256 1033 -439 8 665 1221 36 6 6 chrUextra 10492370 10492539 -18512117 - HETRP_DM Satellite Satellite -1691 181 13 8 665 3364 47 34 28 chrUextra 10492651 10493116 -18511540 - HETRP_DM Satellite Satellite -916 956 489 8 665 4143 113 108 14 chrUextra 10493230 10493990 -18510666 - TART LINE telomeric -6799 7678 6960 8 665 814 37 0 115 chrUextra 10494224 10494346 -18510310 + Baggins1 LINE LOA 5346 5453 0 8 665 489 79 0 0 chrUextra 10494786 10494849 -18509807 + Baggins1 LINE LOA 4791 4853 -600 8 665 6740 4 17 12 chrUextra 10494950 10495710 -18508946 + MAX_I LTR Pao 902 1665 -6249 8 665 499 133 100 0 chrUextra 10496453 10496543 -18508113 + DNAREP1_DM LINE Penelope 496 594 0 8 665 6489 33 21 0 chrUextra 10496670 10497430 -18507226 - R1_DM LINE R1 -2013 3343 2568 8 665 2646 162 139 19 chrUextra 10497554 10498253 -18506403 - TART LINE telomeric -4745 9732 8950 8 665 5026 84 60 8 chrUextra 10498390 10499112 -18505544 + HETA LINE telomeric 5199 5957 -124 8 665 258 62 0 0 chrUextra 10499118 10499150 -18505506 + Invader4_LTR LTR Gypsy 1 32 -314 8 665 6853 12 0 0 chrUextra 10499250 10500000 -18504656 - Gypsy6_I LTR Gypsy -1762 5250 4501 8 665 2632 203 17 18 chrUextra 10500128 10500837 -18503819 - SAR_DM Satellite Satellite -396 1076 369 8 665 46 0 0 0 chrUextra 10501663 10501709 -18502947 + AT_rich Low_complexity Low_complexity 1 46 0 8 665 5188 2 2 0 chrUextra 10501827 10502420 -18502236 - SSU-rRNA_Dme rRNA rRNA -1401 594 1 8 665 32 0 0 0 chrUextra 10502552 10502584 -18502072 + AT_rich Low_complexity Low_complexity 1 32 0 8 665 6585 3 0 0 chrUextra 10502686 10503445 -18501211 + FW_DM LINE Jockey 3353 4111 -581 8 665 1416 136 185 26 chrUextra 10503847 10504150 -18500506 - DMRT1B LINE R1 -18 5165 4815 8 665 2665 3 10 0 chrUextra 10504404 10504715 -18499941 - Invader1_LTR LTR Gypsy -109 314 1 8 665 315 49 0 0 chrUextra 10504833 10504874 -18499782 + (GA)n Simple_repeat Simple_repeat 2 42 0 8 665 445 233 8 16 chrUextra 10504874 10504996 -18499660 + HETRP_DM Satellite Satellite 1549 1669 -203 8 665 282 56 0 0 chrUextra 10505127 10505163 -18499493 + (GA)n Simple_repeat Simple_repeat 2 37 0 8 665 1266 45 11 6 chrUextra 10505267 10505446 -18499210 + (TTATA)n Simple_repeat Simple_repeat 1 180 0 8 665 195 69 0 0 chrUextra 10505464 10505493 -18499163 + (TTATA)n Simple_repeat Simple_repeat 1 29 0 8 665 579 180 21 21 chrUextra 10505757 10505899 -18498757 + TAHRE LINE telomeric 10304 10445 -18 8 665 4481 53 2 12 chrUextra 10506122 10506767 -18497889 + MDG1_I LTR Gypsy 5567 6204 -392 8 665 437 109 59 0 chrUextra 10506760 10506879 -18497777 + MDG1_I LTR Gypsy 6395 6520 -76 8 665 28 48 0 0 chrUextra 10507140 10507182 -18497474 + AT_rich Low_complexity Low_complexity 1 42 0 8 665 32 0 0 0 chrUextra 10507510 10507542 -18497114 + AT_rich Low_complexity Low_complexity 1 32 0 8 665 555 15 0 0 chrUextra 10507674 10507740 -18496916 + SSU-rRNA_Dme rRNA rRNA 1 66 -1929 8 665 1288 30 0 0 chrUextra 10507841 10508007 -18496649 - NTS_DM Other Other -74 166 1 8 665 1408 20 20 20 chrUextra 10508007 10508210 -18496446 - NTS_DM Other Other 0 240 38 8 665 817 0 0 0 chrUextra 10508210 10508306 -18496350 - NTS_DM Other Other -107 133 38 8 665 832 9 9 27 chrUextra 10508306 10508417 -18496239 - NTS_DM Other Other -107 133 25 8 665 21 57 0 0 chrUextra 10508443 10508478 -18496178 + AT_rich Low_complexity Low_complexity 1 35 0 8 665 818 25 0 8 chrUextra 10508478 10508599 -18496057 - NTS_DM Other Other -39 201 82 8 665 3205 167 12 23 chrUextra 10508702 10509455 -18495201 - SAR_DM Satellite Satellite -359 1113 369 8 665 3255 167 16 21 chrUextra 10509559 10510317 -18494339 + SAR_DM Satellite Satellite 246 999 -473 8 665 5261 10 2 5 chrUextra 10510417 10511044 -18493612 - QUASIMODO_I LTR Gypsy -5435 625 1 8 665 1028 8 0 15 chrUextra 10511044 10511176 -18493480 - QUASIMODO_LTR LTR Gypsy 0 658 529 8 665 1368 32 0 5 chrUextra 10511276 10511465 -18493191 + FW_DM LINE Jockey 4505 4692 0 8 665 254 29 0 0 chrUextra 10511472 10511506 -18493150 - R1_DM LINE R1 -3966 1390 1357 8 665 3822 38 68 2 chrUextra 10511506 10512033 -18492623 - R1_DM LINE R1 -4150 1206 645 8 665 2773 200 18 9 chrUextra 10512157 10512894 -18491762 - SAR_DM Satellite Satellite -396 1076 334 8 665 555 118 0 0 chrUextra 10513668 10513753 -18490903 + (TA)n Simple_repeat Simple_repeat 2 86 0 8 665 6503 8 1 0 chrUextra 10513856 10514612 -18490044 - LINEJ1_DM LINE Jockey -95 4925 4169 8 665 6423 9 1 1 chrUextra 10514712 10515471 -18489185 - DOC2_DM LINE Jockey -966 3827 3069 8 665 4218 58 81 27 chrUextra 10515572 10516212 -18488444 - CIRCE LINE Composite -3479 2877 2203 8 665 633 23 139 0 chrUextra 10516241 10516327 -18488329 - CIRCE LINE Composite -4474 1882 1785 8 665 6057 33 0 4 chrUextra 10516430 10517187 -18487469 - R1_DM LINE R1 -717 4639 3886 8 665 3331 160 15 14 chrUextra 10517292 10518022 -18486634 + SAR_DM Satellite Satellite 346 1076 -396 8 665 1587 14 0 0 chrUextra 10518148 10518504 -18486152 + (TAGA)n Simple_repeat Simple_repeat 1 356 0 8 665 456 72 0 0 chrUextra 10518505 10518574 -18486082 + (ATCG)n Simple_repeat Simple_repeat 3 71 0 8 665 1177 56 0 30 chrUextra 10518574 10518907 -18485749 + (TAGA)n Simple_repeat Simple_repeat 1 322 0 8 665 965 50 0 92 chrUextra 10519104 10519257 -18485399 - Baggins1 LINE LOA 0 5453 5315 8 665 1699 33 124 0 chrUextra 10519253 10519494 -18485162 - Baggins1 LINE LOA -456 4997 4727 8 665 26 30 0 0 chrUextra 10519733 10519766 -18484890 + AT_rich Low_complexity Low_complexity 1 33 0 8 665 2719 32 0 39 chrUextra 10520267 10520625 -18484031 - Baggins1 LINE LOA 0 5453 5110 8 665 3922 103 104 34 chrUextra 10520728 10521484 -18483172 + BATUMI_I LTR Pao 821 1629 -6334 8 665 4281 62 3 5 chrUextra 10521584 10522165 -18482491 - R1_DM LINE R1 -4776 580 1 8 665 1198 28 0 0 chrUextra 10522198 10522343 -18482313 - R1_DM LINE R1 0 5356 5212 8 665 569 29 0 0 chrUextra 10522443 10522513 -18482143 - NTS_DM Other Other -133 107 38 8 665 817 0 0 0 chrUextra 10522513 10522609 -18482047 - NTS_DM Other Other -107 133 38 8 665 819 19 9 27 chrUextra 10522609 10522720 -18481936 - NTS_DM Other Other -107 133 25 8 665 21 57 0 0 chrUextra 10522746 10522781 -18481875 + AT_rich Low_complexity Low_complexity 1 35 0 8 665 1195 25 6 6 chrUextra 10522781 10522945 -18481711 - NTS_DM Other Other -39 201 38 8 665 848 18 0 27 chrUextra 10522945 10523057 -18481599 - NTS_DM Other Other -107 133 25 8 665 480 85 0 12 chrUextra 10523119 10523202 -18481454 - NTS_DM Other Other -39 201 120 8 665 4998 3 0 0 chrUextra 10523302 10523919 -18480737 + Invader2_I LTR Gypsy 3973 4589 -3 8 665 1196 0 7 0 chrUextra 10523922 10524061 -18480595 + Invader2_LTR LTR Gypsy 1 140 -126 8 665 3301 73 51 38 chrUextra 10524161 10524920 -18479736 + PROTOP_A DNA P 403 1134 -19 8 665 3448 22 92 11 chrUextra 10525020 10525477 -18479179 + R1_DM LINE R1 3173 3666 -1690 8 665 2484 7 0 0 chrUextra 10525487 10525779 -18478877 + R1_DM LINE R1 4026 4317 -1039 8 665 6484 1 1 1 chrUextra 10525879 10526638 -18478018 + FW_DM LINE Jockey 1652 2410 -2282 8 665 3151 181 9 19 chrUextra 10526739 10527494 -18477162 + SAR_DM Satellite Satellite 371 1118 -354 8 665 6577 1 0 0 chrUextra 10527597 10528356 -18476300 + DOC LINE Jockey 2350 3108 -1617 8 665 2209 78 95 6 chrUextra 10528456 10528803 -18475853 - DMRT1A LINE R1 -4805 378 1 8 665 3147 49 0 0 chrUextra 10528805 10529215 -18475441 - DOC3_DM LINE Jockey -4110 630 221 8 665 235 186 0 0 chrUextra 10529479 10529522 -18475134 + LSU-rRNA_Dme rRNA rRNA 2578 2620 -1280 8 665 4030 2 0 0 chrUextra 10529602 10530074 -18474582 - G_DM LINE Jockey -3 4343 3872 8 665 3329 71 7 4 chrUextra 10530174 10530638 -18474018 - R1_DM LINE R1 -4891 465 1 8 665 2212 19 0 0 chrUextra 10530671 10530933 -18473723 - R1_DM LINE R1 0 5356 5095 8 665 575 40 0 0 chrUextra 10531033 10531109 -18473547 - ARS406_DM Unknown Unknown -188 165 90 8 665 2605 207 14 20 chrUextra 10531108 10531790 -18472866 + SAR_DM Satellite Satellite 1 677 -216 8 665 6349 3 1 1 chrUextra 10531892 10532651 -18472005 - ROO_I LTR Pao -1166 7090 6332 8 665 1625 24 14 0 chrUextra 10532751 10532963 -18471693 - BATUMI_I LTR Pao -1322 6641 6427 8 665 4272 13 0 2 chrUextra 10532986 10533510 -18471146 + BATUMI_I LTR Pao 7303 7825 -138 8 665 6263 24 0 0 chrUextra 10533610 10534369 -18470287 - R1_DM LINE R1 -3147 2209 1451 8 665 734 11 0 0 chrUextra 10535133 10535228 -18469428 - ALUII_DM Unknown Unknown 0 240 146 8 665 5182 26 30 3 chrUextra 10535328 10536087 -18468569 - STALKER4_I LTR Gypsy -2650 3880 3047 8 665 5053 2 3 7 chrUextra 10536187 10536788 -18467868 - G2_DM LINE Jockey -1305 1797 1199 8 665 1494 0 0 0 chrUextra 10536774 10536946 -18467710 - G2_DM LINE Jockey -2340 762 591 8 665 6415 1 4 4 chrUextra 10537046 10537805 -18466851 + LSU-rRNA_Dme rRNA rRNA 807 1565 -2335 8 665 3174 3 0 0 chrUextra 10537905 10538277 -18466379 + DOC LINE Jockey 1648 2019 -2706 8 665 9744 71 0 14 chrUextra 10538271 10539523 -18465133 + DOC LINE Jockey 3124 4357 -368 8 665 5700 4 0 7 chrUextra 10539623 10540301 -18464355 + DM412 LTR Gypsy 208 880 -6017 8 665 519 13 50 12 chrUextra 10540302 10540382 -18464274 + DM412 LTR Gypsy 820 902 -5995 8 665 5617 20 132 1 chrUextra 10540482 10541239 -18463417 + R1_DM LINE R1 3604 4459 -897 8 665 286 265 47 39 chrUextra 10541498 10541744 -18462912 + IDEFIX_I LTR Gypsy 3729 3858 -1770 8 665 327 137 0 0 chrUextra 10541746 10541797 -18462859 + DNAREP1_DM LINE Penelope 1 51 -543 8 665 356 85 0 0 chrUextra 10541796 10541855 -18462801 - IDEFIX_I LTR Gypsy -4618 1010 952 8 665 39 22 0 0 chrUextra 10541866 10541912 -18462744 + AT_rich Low_complexity Low_complexity 1 46 0 8 665 5903 28 70 0 chrUextra 10542200 10542959 -18461697 - R1_DM LINE R1 -2448 2908 2097 8 665 3531 7 0 0 chrUextra 10543059 10543475 -18461181 - Copia2_I LTR Copia -3746 416 1 8 665 1665 5 0 0 chrUextra 10543475 10543672 -18460984 - Copia2_LTR_DM LTR Copia 0 198 2 8 665 1182 27 0 0 chrUextra 10543672 10543818 -18460838 + (TTA)n Simple_repeat Simple_repeat 2 147 0 8 665 4101 14 13 4 chrUextra 10543918 10544611 -18460045 - ACCORD_I LTR Gypsy -5765 523 1 8 665 505 30 0 0 chrUextra 10544611 10544677 -18459979 - ACCORD_LTR LTR Gypsy 0 558 493 8 665 2025 150 16 7 chrUextra 10544777 10545200 -18459456 - SAR_DM Satellite Satellite -666 806 380 8 665 2163 37 183 3 chrUextra 10545213 10545536 -18459120 + DOC2_DM LINE Jockey 10 390 -4403 8 665 244 128 0 21 chrUextra 10545640 10545688 -18458968 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 8 665 244 128 0 21 chrUextra 10545933 10545981 -18458675 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 8 665 6374 13 0 1 chrUextra 10546495 10547254 -18457402 + DOC2_DM LINE Jockey 3877 4634 -159 8 665 5475 46 25 4 chrUextra 10547355 10548113 -18456543 - R1_DM LINE R1 -4312 1044 271 8 665 4376 152 0 0 chrUextra 10548213 10548970 -18455686 + HETA LINE telomeric 2590 3346 -2735 8 665 3334 169 42 8 chrUextra 10549072 10549831 -18454825 - SAR_DM Satellite Satellite -435 1037 253 8 665 6284 15 3 0 chrUextra 10549931 10550674 -18453982 + Copia2_I LTR Copia 1846 2590 -1572 8 665 422 0 19 0 chrUextra 10550790 10550842 -18453814 - SSU-rRNA_Dme rRNA rRNA -1942 53 1 8 665 32 0 0 0 chrUextra 10550974 10551006 -18453650 + AT_rich Low_complexity Low_complexity 1 32 0 8 665 28 48 0 0 chrUextra 10551334 10551376 -18453280 + AT_rich Low_complexity Low_complexity 1 42 0 8 665 779 72 24 8 chrUextra 10552009 10552135 -18452521 - STALKER4_I LTR Gypsy -5645 885 758 8 665 672 180 39 54 chrUextra 10552201 10552406 -18452250 - ROVER-LTR_DM LTR Gypsy 0 367 166 8 665 2194 99 121 30 chrUextra 10552517 10553055 -18451601 - TART LINE telomeric -7157 7320 6734 8 665 225 277 20 74 chrUextra 10553117 10553265 -18451391 - TART LINE telomeric -1492 12985 12846 8 665 6185 30 0 0 chrUextra 10553367 10554126 -18450530 + R1_DM LINE R1 2713 3471 -1885 8 665 5298 93 0 1 chrUextra 10554226 10554983 -18449673 - HETA LINE telomeric -3319 2762 2007 8 665 700 42 32 32 chrUextra 10555085 10555209 -18449447 + NTS_DM Other Other 117 240 0 8 665 1734 21 17 17 chrUextra 10555209 10555449 -18449207 + NTS_DM Other Other 1 240 0 8 665 1836 8 17 13 chrUextra 10555449 10555688 -18448968 + NTS_DM Other Other 1 240 0 8 665 1285 0 6 0 chrUextra 10555688 10555844 -18448812 + NTS_DM Other Other 1 157 -83 8 665 471 16 78 0 chrUextra 10555948 10556012 -18448644 - Invader2_LTR LTR Gypsy -197 69 1 8 665 674 142 306 13 chrUextra 10556012 10556302 -18448354 - HMSBEAGLE_I LTR Gypsy -356 6173 5797 8 665 2024 108 29 0 chrUextra 10556313 10556627 -18448029 - HMSBEAGLE_I LTR Gypsy -901 5628 5306 8 665 368 119 0 0 chrUextra 10556644 10556703 -18447953 - HMSBEAGLE_I LTR Gypsy -3360 3169 3111 8 665 3650 175 7 8 chrUextra 10556803 10557562 -18447094 + SAR_DM Satellite Satellite 298 1055 -417 8 665 3059 183 57 22 chrUextra 10558521 10559275 -18445381 - SAR_DM Satellite Satellite -361 1111 332 8 665 988 180 80 90 chrUextra 10559498 10559810 -18444846 - TIRANT_LTR LTR Gypsy -108 309 1 8 665 2715 174 46 12 chrUextra 10560239 10560996 -18443660 + SAR_DM Satellite Satellite 326 1264 -208 8 665 1891 17 17 21 chrUextra 10561124 10561360 -18443296 - BATUMI_I LTR Pao -679 7284 7050 8 665 90 10 0 0 chrUextra 10561360 10561457 -18443199 + AT_rich Low_complexity Low_complexity 1 97 0 8 665 215 157 42 14 chrUextra 10561457 10561528 -18443128 + (TA)n Simple_repeat Simple_repeat 1 73 0 8 665 2481 35 3 22 chrUextra 10561534 10561857 -18442799 - BATUMI_I LTR Pao -5889 2074 1758 8 665 6331 38 1 0 chrUextra 10561957 10562712 -18441944 + TAHRE LINE telomeric 5102 5857 -4606 8 665 28 48 0 0 chrUextra 10562938 10562980 -18441676 + AT_rich Low_complexity Low_complexity 1 42 0 8 665 276 111 0 0 chrUextra 10563200 10563245 -18441411 + (CA)n Simple_repeat Simple_repeat 1 45 0 8 665 6670 1 1 0 chrUextra 10563675 10564434 -18440222 - BLOOD_I LTR Gypsy -2757 3856 3097 8 665 3446 178 8 12 chrUextra 10564543 10565293 -18439363 - SAR_DM Satellite Satellite -514 958 212 8 665 3322 236 51 18 chrUextra 10565400 10566993 -18437663 + SAR_DM Satellite Satellite 1 1644 -396 8 665 3577 175 9 8 chrUextra 10567972 10568727 -18435929 + SAR_DM Satellite Satellite 282 1037 -435 8 665 2196 4 0 0 chrUextra 10568829 10569090 -18435566 + ROO_I LTR Pao 7996 8256 0 8 665 3906 2 0 0 chrUextra 10569090 10569518 -18435138 + ROO_LTR LTR Pao 1 428 0 8 665 2381 25 28 0 chrUextra 10569688 10569973 -18434683 - R1_DM LINE R1 -1573 3783 3491 8 665 3917 32 2 0 chrUextra 10569975 10570447 -18434209 - R1_DM LINE R1 -2388 2968 2496 8 665 5854 41 32 11 chrUextra 10570547 10571305 -18433351 - R1_DM LINE R1 -4105 1251 478 8 665 426 20 0 0 chrUextra 10571405 10571456 -18433200 + (TTCTC)n Simple_repeat Simple_repeat 5 55 0 8 665 3201 200 12 21 chrUextra 10572268 10573016 -18431640 + SAR_DM Satellite Satellite 1 741 -216 8 665 5668 29 0 0 chrUextra 10573121 10573777 -18430879 - CIRCE LINE Composite -273 6083 5428 8 665 3296 177 9 20 chrUextra 10573992 10574737 -18429919 - SAR_DM Satellite Satellite -354 1118 382 8 665 3046 0 0 0 chrUextra 10574837 10575167 -18429489 - ROO_LTR LTR Pao -98 330 1 8 665 3625 14 0 0 chrUextra 10575167 10575595 -18429061 - DM297_I LTR Gypsy -4430 1737 1310 8 665 2969 174 56 27 chrUextra 10575695 10576409 -18428247 - HETA LINE telomeric -706 5375 4641 8 665 6574 11 0 0 chrUextra 10576553 10577311 -18427345 - IDEFIX_I LTR Gypsy -4087 1541 784 8 665 3576 172 11 9 chrUextra 10577411 10578164 -18426492 + SAR_DM Satellite Satellite 303 1056 -416 8 665 6019 4 4 61 chrUextra 10579127 10579885 -18424771 - LSU-rRNA_Dme rRNA rRNA -1606 2294 1580 8 665 6822 7 0 0 chrUextra 10579985 10580743 -18423913 + R1_DM LINE R1 3929 4686 -670 8 665 3204 32 3 0 chrUextra 10580843 10581223 -18423433 - R1_DM LINE R1 -417 4939 4559 8 665 3232 16 3 3 chrUextra 10581221 10581601 -18423055 - R1_DM LINE R1 -1270 4086 3707 8 665 3436 179 21 14 chrUextra 10581701 10582447 -18422209 + SAR_DM Satellite Satellite 1 750 -411 8 665 362 94 412 0 chrUextra 10583232 10583317 -18421339 + FB4_DM DNA Tc1 3 122 -3967 8 665 599 0 0 0 chrUextra 10583417 10583482 -18421174 - NTS_DM Other Other -175 65 1 8 665 1910 0 17 17 chrUextra 10583482 10583722 -18420934 - NTS_DM Other Other 0 240 1 8 665 1930 4 17 13 chrUextra 10583722 10583961 -18420695 - NTS_DM Other Other 0 240 1 8 665 1583 19 19 19 chrUextra 10583961 10584175 -18420481 - NTS_DM Other Other 0 240 27 8 665 4696 4 2 0 chrUextra 10584280 10584796 -18419860 + SSU-rRNA_Dme rRNA rRNA 1479 1995 0 8 665 2111 294 16 16 chrUextra 10585134 10585891 -18418765 - FROGGER_I LTR Copia -349 1728 972 8 665 5071 70 34 17 chrUextra 10585991 10586749 -18417907 + HETA LINE telomeric 4600 5370 -711 8 665 2719 32 20 0 chrUextra 10586849 10587196 -18417460 - PROTOP DNA P -2465 2015 1662 8 665 3299 25 5 0 chrUextra 10587205 10587607 -18417049 - PROTOP DNA P -3893 587 184 8 665 2871 133 83 36 chrUextra 10587707 10588465 -18416191 + STALKER4_I LTR Gypsy 354 1195 -5335 8 665 5355 22 53 0 chrUextra 10588565 10589323 -18415333 - DMRT1B LINE R1 -1944 3239 2442 8 665 385 261 114 96 chrUextra 10589825 10590105 -18414551 - Invader1_LTR LTR Gypsy -55 368 84 8 665 2691 80 30 12 chrUextra 10590281 10591038 -18413618 - DMSAT6 Satellite Satellite -100 771 1 8 665 6817 4 1 0 chrUextra 10591139 10591897 -18412759 + R1_DM LINE R1 4505 5263 -93 8 665 944 88 7 0 chrUextra 10591997 10592134 -18412522 + DIVER2_LTR LTR Pao 248 385 0 8 665 3197 171 19 38 chrUextra 10592857 10593612 -18411044 + SAR_DM Satellite Satellite 425 1164 -308 8 665 6626 13 1 3 chrUextra 10593713 10594471 -18410185 - R1_DM LINE R1 -169 5187 4431 8 665 3530 247 22 43 chrUextra 10594579 10596137 -18408519 + SAR_DM Satellite Satellite 1 1525 -261 8 665 1147 65 0 0 chrUextra 10596034 10596187 -18408469 - ARS406_DM Unknown Unknown -164 189 37 8 665 378 135 33 33 chrUextra 10596304 10596396 -18408260 + XDMR_DM Unknown Unknown 259 350 -10 8 665 1049 291 26 27 chrUextra 10596320 10597026 -18407630 - SAR_DM Satellite Satellite -351 1121 260 8 665 6063 28 1 16 chrUextra 10597145 10597903 -18406753 + ROO_I LTR Pao 1552 2298 -5958 8 665 3236 185 8 7 chrUextra 10598003 10598727 -18405929 - SAR_DM Satellite Satellite -581 891 167 8 665 1053 78 7 0 chrUextra 10598608 10598761 -18405895 + ARS406_DM Unknown Unknown 1 154 -199 8 665 1795 297 14 18 chrUextra 10598954 10599613 -18405043 - Invader1_I LTR Gypsy -618 2568 1913 8 665 719 67 19 0 chrUextra 10599719 10599824 -18404832 - ARS406_DM Unknown Unknown -246 107 1 8 665 2988 195 23 11 chrUextra 10599730 10600467 -18404189 + SAR_DM Satellite Satellite 192 937 -535 8 665 1620 0 0 0 chrUextra 10600580 10600760 -18403896 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 8 665 240 307 64 59 chrUextra 10600786 10600990 -18403666 - OSVALDO_I LTR Gypsy -3733 2920 2716 8 665 1558 93 83 4 chrUextra 10601064 10601335 -18403321 - BS4_DM LINE Jockey -177 577 337 8 665 6345 19 3 1 chrUextra 10601435 10602193 -18402463 + G_DM LINE Jockey 1918 2676 -1670 8 665 614 73 0 0 chrUextra 10602299 10602381 -18402275 - Jockey2 LINE Jockey -3346 82 1 8 665 1478 194 29 59 chrUextra 10602512 10602956 -18401700 - Gypsy_LTR LTR Gypsy -51 431 1 8 665 492 131 36 0 chrUextra 10603370 10603454 -18401202 - NTS_DM Other Other -150 90 4 8 665 1355 6 0 18 chrUextra 10603564 10603729 -18400927 - NTS_DM Other Other -78 162 1 8 665 1243 6 33 22 chrUextra 10603729 10603909 -18400747 - NTS_DM Other Other 0 240 59 8 665 625 79 8 137 chrUextra 10604009 10604126 -18400530 + Gypsy12_I LTR Gypsy 3773 3874 -1672 8 665 4866 92 0 0 chrUextra 10604124 10604767 -18399889 + Gypsy12_I LTR Gypsy 4206 4848 -698 8 665 295 51 0 0 chrUextra 10604867 10604906 -18399750 - ARS406_DM Unknown Unknown -225 128 90 8 665 3077 192 19 25 chrUextra 10604905 10605624 -18399032 + SAR_DM Satellite Satellite 1 715 -203 8 665 489 250 21 16 chrUextra 10605726 10605917 -18398739 - XDMR_DM Unknown Unknown -151 209 18 8 665 2798 194 11 18 chrUextra 10605755 10606481 -18398175 + SAR_DM Satellite Satellite 151 871 -601 8 665 6645 0 1 1 chrUextra 10606583 10607341 -18397315 - ROO_I LTR Pao -2753 5503 4746 8 665 4369 10 0 0 chrUextra 10607441 10607930 -18396726 + TABOR_LTR LTR Gypsy 18 506 0 8 665 2376 0 0 0 chrUextra 10607930 10608199 -18396457 + TABOR_I LTR Gypsy 1 269 -6067 8 665 3352 192 7 11 chrUextra 10608299 10609057 -18395599 + SAR_DM Satellite Satellite 282 1036 -436 8 665 4825 21 0 2 chrUextra 10609157 10609763 -18394893 - ROO_I LTR Pao -43 8213 7609 8 665 1346 7 0 0 chrUextra 10609763 10609915 -18394741 - ROO_I LTR Pao -1677 6579 6428 8 665 3455 180 6 8 chrUextra 10610015 10610739 -18393917 - SAR_DM Satellite Satellite -559 913 192 8 665 847 100 0 0 chrUextra 10610643 10610773 -18393883 + ARS406_DM Unknown Unknown 1 130 -223 8 665 3226 188 15 21 chrUextra 10610873 10611628 -18393028 - SAR_DM Satellite Satellite -594 750 1 8 665 3561 170 7 21 chrUextra 10611731 10612487 -18392169 + SAR_DM Satellite Satellite 346 1090 -382 8 665 6480 29 3 0 chrUextra 10612589 10613347 -18391309 - R1_DM LINE R1 -420 4936 4177 8 665 6909 1 0 1 chrUextra 10613447 10614205 -18390451 + DOC LINE Jockey 3599 4355 -370 8 665 6718 0 4 0 chrUextra 10614305 10615063 -18389593 + DOC LINE Jockey 1414 2174 -2551 8 665 1028 24 0 8 chrUextra 10615163 10615288 -18389368 + MICROPIA_I LTR Gypsy 4353 4476 0 8 665 4093 6 0 61 chrUextra 10615288 10615795 -18388861 + MICROPIA_LTR LTR Gypsy 1 476 0 8 665 1108 16 0 0 chrUextra 10615795 10615921 -18388735 + MICROPIA_I LTR Gypsy 1 126 -4350 8 665 6433 25 3 0 chrUextra 10616021 10616779 -18387877 + R1_DM LINE R1 2051 2810 -2546 8 666 21 95 0 0 chrUextra 10616945 10617008 -18387648 + AT_rich Low_complexity Low_complexity 1 63 0 8 666 5083 0 0 42 chrUextra 10617020 10617637 -18387019 + LSU-rRNA_Dme rRNA rRNA 1 591 -3309 8 666 678 143 250 7 chrUextra 10617989 10618137 -18386519 - DNAREP1_DM LINE Penelope -388 206 23 8 666 213 39 0 0 chrUextra 10618137 10618163 -18386493 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 8 666 2504 178 21 7 chrUextra 10618595 10619111 -18385545 + SAR_DM Satellite Satellite 1 661 -660 8 666 1055 95 0 0 chrUextra 10619111 10619269 -18385387 - ARS406_DM Unknown Unknown -195 158 1 8 666 2504 178 21 7 chrUextra 10619269 10619347 -18385309 + SAR_DM Satellite Satellite 662 763 -558 8 666 4672 9 0 0 chrUextra 10619453 10619982 -18384674 - Copia2_I LTR Copia -3633 529 1 8 666 1770 0 0 0 chrUextra 10619982 10620180 -18384476 - Copia2_LTR_DM LTR Copia 0 198 1 8 666 240 0 0 0 chrUextra 10620180 10620209 -18384447 - Copia2_I LTR Copia 0 4162 4134 8 666 3140 186 19 26 chrUextra 10620312 10621068 -18383588 + SAR_DM Satellite Satellite 1 750 -216 8 666 1776 13 17 17 chrUextra 10621173 10621405 -18383251 + NTS_DM Other Other 9 240 0 8 666 1813 21 17 17 chrUextra 10621405 10621645 -18383011 + NTS_DM Other Other 1 240 0 8 666 1930 4 17 13 chrUextra 10621645 10621884 -18382772 + NTS_DM Other Other 1 240 0 8 666 369 23 0 0 chrUextra 10621884 10621927 -18382729 + NTS_DM Other Other 1 43 -197 8 666 3569 167 9 19 chrUextra 10622885 10623643 -18381013 - SAR_DM Satellite Satellite -376 1096 346 8 666 3014 108 18 44 chrUextra 10623743 10624292 -18380364 - BATUMI_I LTR Pao -6680 1283 749 8 666 377 151 87 56 chrUextra 10624337 10624498 -18380158 - BATUMI_I LTR Pao -7194 769 604 8 666 6719 3 1 1 chrUextra 10624601 10625359 -18379297 - ROO_I LTR Pao -2525 5731 4974 8 666 4527 2 2 4 chrUextra 10625459 10625968 -18378688 - LSU-rRNA_Dme rRNA rRNA -2327 1573 1066 8 666 2299 0 0 0 chrUextra 10625968 10626217 -18378439 - ROO_LTR LTR Pao 0 428 180 8 666 259 70 0 0 chrUextra 10626317 10626360 -18378296 + PROTOP DNA P 678 720 -3760 8 666 3684 49 47 0 chrUextra 10626409 10626903 -18377753 + PROTOP_A DNA P 589 1105 0 8 666 3431 167 14 14 chrUextra 10627176 10627912 -18376744 - SAR_DM Satellite Satellite -411 1061 326 8 666 242 174 22 0 chrUextra 10628034 10628080 -18376576 - DMCR1A LINE CR1 -3183 1287 1241 8 666 235 191 0 0 chrUextra 10628343 10628390 -18376266 + DNAREP1_DM LINE Penelope 439 485 -109 8 666 611 209 158 13 chrUextra 10628407 10628635 -18376021 - DM412 LTR Gypsy -2420 4477 4217 8 666 360 207 34 11 chrUextra 10628659 10628747 -18375909 - Stalker2_I LTR Gypsy -3348 4054 3965 8 666 970 9 0 0 chrUextra 10628891 10629007 -18375649 - NTS_DM Other Other -87 153 38 8 666 907 9 0 27 chrUextra 10629007 10629119 -18375537 - NTS_DM Other Other -107 133 25 8 666 22 56 0 0 chrUextra 10629145 10629181 -18375475 + AT_rich Low_complexity Low_complexity 1 36 0 8 666 268 119 203 0 chrUextra 10629181 10629240 -18375416 - LSU-rRNA_Dme rRNA rRNA -1249 2651 2581 8 666 262 150 0 0 chrUextra 10629283 10629323 -18375333 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 666 262 150 0 0 chrUextra 10629375 10629415 -18375241 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 666 262 150 0 0 chrUextra 10629467 10629507 -18375149 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 666 22 56 0 0 chrUextra 10629512 10629548 -18375108 + AT_rich Low_complexity Low_complexity 1 36 0 8 666 257 0 0 0 chrUextra 10629620 10629649 -18375007 - LSU-rRNA_Dme rRNA rRNA 0 3900 3872 8 666 2143 85 0 28 chrUextra 10629749 10630074 -18374582 + TART LINE telomeric 894 1209 -13268 8 666 2240 29 42 24 chrUextra 10630074 10630361 -18374295 + PROTOP_A DNA P 1 292 -813 8 666 1271 27 0 7 chrUextra 10630356 10630507 -18374149 + TART LINE telomeric 9784 9933 -4544 8 666 5246 18 0 0 chrUextra 10631465 10632070 -18372586 + FW_DM LINE Jockey 1303 1907 -2785 8 666 1334 13 0 6 chrUextra 10632066 10632223 -18372433 + FW_DM LINE Jockey 2282 2437 -2255 8 666 22 0 0 0 chrUextra 10632323 10632345 -18372311 + AT_rich Low_complexity Low_complexity 1 22 0 8 666 250 278 109 34 chrUextra 10632846 10632965 -18371691 + T412LTR LTR LTR 62 189 -292 8 666 247 314 36 22 chrUextra 10632857 10632994 -18371662 + Gypsy11_LTR LTR Gypsy 100 238 -214 8 666 1616 89 93 0 chrUextra 10633183 10633419 -18371237 + Gypsy12_I LTR Gypsy 1297 1554 -3992 8 666 2205 111 12 12 chrUextra 10633426 10633745 -18370911 + Gypsy12_I LTR Gypsy 1503 1821 -3725 8 666 1346 81 132 0 chrUextra 10633742 10633939 -18370717 + Gypsy12_I LTR Gypsy 4465 4687 -859 8 666 5827 52 25 14 chrUextra 10634039 10634797 -18369859 - DMCR1A LINE CR1 -2249 2221 1456 8 666 746 44 0 0 chrUextra 10634897 10634988 -18369668 - CIRCE LINE Composite -838 5518 5428 8 666 2658 81 67 30 chrUextra 10635068 10635499 -18369157 - CIRCE LINE Composite -929 5427 4981 8 666 2801 6 0 0 chrUextra 10635755 10636066 -18368590 - SSU-rRNA_Dme rRNA rRNA -1684 311 1 8 666 32 0 0 0 chrUextra 10636198 10636230 -18368426 + AT_rich Low_complexity Low_complexity 1 32 0 8 666 4710 69 37 22 chrUextra 10636613 10637371 -18367285 + STALKER4_I LTR Gypsy 830 1598 -4932 8 666 4688 0 0 0 chrUextra 10637471 10637991 -18366665 + FW_DM LINE Jockey 4173 4692 0 8 666 1839 0 10 0 chrUextra 10638329 10638536 -18366120 + R1_DM LINE R1 5148 5356 0 8 666 4999 2 0 2 chrUextra 10638534 10639086 -18365570 + LSU-rRNA_Dme rRNA rRNA 2640 3190 -710 8 666 6398 29 0 1 chrUextra 10639187 10639945 -18364711 - R1_DM LINE R1 -1664 3692 2936 8 666 713 43 0 21 chrUextra 10640045 10640141 -18364515 - NTS_DM Other Other -146 94 1 8 666 1835 17 17 17 chrUextra 10640141 10640381 -18364275 - NTS_DM Other Other 0 240 1 8 666 1813 21 17 17 chrUextra 10640381 10640621 -18364035 - NTS_DM Other Other 0 240 1 8 666 1233 22 22 22 chrUextra 10640621 10640803 -18363853 - NTS_DM Other Other 0 240 59 8 666 2647 160 29 34 chrUextra 10640903 10641651 -18363005 - TAHRE LINE telomeric -3 10460 10012 8 666 651 0 43 32 chrUextra 10641761 10641854 -18362802 + NTS_DM Other Other 147 240 0 8 666 1908 8 17 13 chrUextra 10641854 10642093 -18362563 + NTS_DM Other Other 1 240 0 8 666 1355 6 0 18 chrUextra 10642093 10642258 -18362398 + NTS_DM Other Other 1 162 -78 8 666 514 119 36 0 chrUextra 10642368 10642452 -18362204 + NTS_DM Other Other 4 90 -150 8 666 6664 8 0 0 chrUextra 10642619 10643377 -18361279 - QUASIMODO_I LTR Gypsy -2777 3283 2526 8 666 5050 44 59 1 chrUextra 10643477 10644230 -18360426 - PROTOP DNA P -3727 753 20 8 666 3241 31 3 3 chrUextra 10644650 10645035 -18359621 - DIVER2_LTR LTR Pao 0 385 1 8 666 465 69 0 0 chrUextra 10645035 10645093 -18359563 - DIVER2_I LTR Pao 0 4147 4090 8 666 1663 11 0 0 chrUextra 10645193 10645384 -18359272 + ROVER-I_DM LTR Gypsy 6394 6584 0 8 666 3283 0 0 0 chrUextra 10645384 10645750 -18358906 + ROVER-LTR_DM LTR Gypsy 1 366 -1 8 666 198 0 0 0 chrUextra 10645750 10645772 -18358884 + (TA)n Simple_repeat Simple_repeat 1 22 0 8 666 3335 192 7 9 chrUextra 10646052 10646809 -18357847 + SAR_DM Satellite Satellite 230 984 -488 8 666 4717 88 96 4 chrUextra 10646913 10647667 -18356989 - TART LINE telomeric -13123 1354 532 8 666 6870 1 0 0 chrUextra 10647767 10648525 -18356131 + DMRT1A LINE R1 1626 2383 -2800 8 666 3014 9 3 0 chrUextra 10648625 10648964 -18355692 + LSU-rRNA_Dme rRNA rRNA 2293 2632 -1268 8 666 3743 5 5 0 chrUextra 10648964 10649383 -18355273 + R1_DM LINE R1 1 421 -4935 8 666 3737 24 50 0 chrUextra 10649483 10650241 -18354415 - R1_DM LINE R1 -347 5009 4214 8 666 1037 183 30 13 chrUextra 10650342 10651098 -18353558 - SAR_DM Satellite Satellite -800 768 1 8 666 2439 109 1 45 chrUextra 10651204 10651955 -18352701 - DMSAT6 Satellite Satellite 0 717 1 8 666 2051 4 0 0 chrUextra 10652055 10652304 -18352352 + DM176_I LTR Gypsy 1005 1253 -5167 8 666 4400 10 0 2 chrUextra 10652300 10652812 -18351844 + DM176_I LTR Gypsy 5201 5711 -709 8 666 259 128 0 21 chrUextra 10653120 10653168 -18351488 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 8 666 259 128 0 21 chrUextra 10653394 10653442 -18351214 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 8 666 6590 9 1 3 chrUextra 10653769 10654524 -18350132 + STALKER4_I LTR Gypsy 3435 4188 -2342 8 666 3921 26 2 0 chrUextra 10654626 10655089 -18349567 - NINJA_I LTR Pao -1430 4581 4118 8 666 2425 17 31 0 chrUextra 10655089 10655383 -18349273 - NINJA_I LTR Pao -3200 2811 2509 8 666 514 119 36 0 chrUextra 10655713 10655797 -18348859 - NTS_DM Other Other -150 90 4 8 666 1355 6 0 18 chrUextra 10655907 10656072 -18348584 - NTS_DM Other Other -78 162 1 8 666 1234 6 24 18 chrUextra 10656072 10656240 -18348416 - NTS_DM Other Other 0 240 72 8 666 1048 299 110 33 chrUextra 10656341 10657016 -18347640 - ROVER-I_DM LTR Gypsy -5173 1411 341 8 666 5997 26 1 4 chrUextra 10657197 10657954 -18346702 - Invader2_I LTR Gypsy -70 4522 3768 8 666 5263 116 0 0 chrUextra 10658054 10658811 -18345845 + HETA LINE telomeric 2194 2950 -3131 8 666 3265 0 0 63 chrUextra 10658911 10659321 -18345335 - LSU-rRNA_Dme rRNA rRNA -3516 384 1 8 666 21 95 0 0 chrUextra 10659333 10659396 -18345260 + AT_rich Low_complexity Low_complexity 1 63 0 8 666 34 24 0 0 chrUextra 10659609 10659650 -18345006 + AT_rich Low_complexity Low_complexity 1 41 0 8 666 6759 4 8 0 chrUextra 10659768 10660525 -18344131 + Copia2_I LTR Copia 310 1072 -3090 8 666 22 0 0 0 chrUextra 10660625 10660647 -18344009 + AT_rich Low_complexity Low_complexity 1 22 0 8 666 305 240 23 76 chrUextra 10660765 10660896 -18343760 - ROVER-I_DM LTR Gypsy -6460 124 1 8 666 412 113 0 27 chrUextra 10660896 10660960 -18343696 - DMTOM1_LTR LTR Gypsy 0 410 349 8 666 608 148 40 16 chrUextra 10660960 10661084 -18343572 - DMTOM1_LTR LTR Gypsy 0 410 284 8 666 273 191 59 0 chrUextra 10661101 10661169 -18343487 - DM176_LTR LTR Gypsy -141 366 295 8 666 272 140 20 20 chrUextra 10661278 10661329 -18343327 - DM176_LTR LTR Gypsy -238 269 219 8 666 3558 166 14 19 chrUextra 10661482 10662239 -18342417 - SAR_DM Satellite Satellite -365 1107 354 8 666 3846 0 0 0 chrUextra 10662339 10662759 -18341897 + LSU-rRNA_Dme rRNA rRNA 2236 2655 -1245 8 666 2871 24 0 0 chrUextra 10662759 10663096 -18341560 + R1_DM LINE R1 4805 5141 -215 8 666 2586 101 21 5 chrUextra 10663200 10663953 -18340703 - DMSAT6 Satellite Satellite -64 764 1 8 666 701 329 46 23 chrUextra 10664055 10664726 -18339930 + GTWIN_I LTR Gypsy 3254 4467 -2062 8 666 3413 8 0 0 chrUextra 10664910 10665297 -18339359 - BARI_DM DNA Tc1 -1338 390 4 8 666 3256 0 0 0 chrUextra 10665297 10665667 -18338989 - BARI_DM DNA Tc1 -1 1727 1358 8 666 819 0 0 0 chrUextra 10666433 10666524 -18338132 + (TTCTC)n Simple_repeat Simple_repeat 2 92 0 8 666 5972 24 14 11 chrUextra 10666624 10667381 -18337275 + PROTOP_A DNA P 70 829 -276 8 666 4583 4 9 0 chrUextra 10667481 10668019 -18336637 + QUASIMODO_LTR LTR Gypsy 116 658 0 8 666 1809 14 0 5 chrUextra 10668019 10668238 -18336418 + QUASIMODO_I LTR Gypsy 1 218 -5842 8 666 746 124 94 6 chrUextra 10668338 10668508 -18336148 + DNAREP1_DM LINE Penelope 113 297 -297 8 666 4931 74 3 16 chrUextra 10669195 10669952 -18334704 + BATUMI_I LTR Pao 2014 2793 -5121 8 666 3022 161 55 25 chrUextra 10670052 10670785 -18333871 - TART LINE telomeric -4779 9698 8944 8 666 218 284 0 43 chrUextra 10671058 10671150 -18333506 + A-rich Low_complexity Low_complexity 1 88 0 8 666 22 0 0 0 chrUextra 10671192 10671214 -18333442 + AT_rich Low_complexity Low_complexity 1 22 0 8 666 26 30 0 0 chrUextra 10671256 10671289 -18333367 + AT_rich Low_complexity Low_complexity 1 33 0 8 666 28 48 0 0 chrUextra 10671973 10672015 -18332641 + AT_rich Low_complexity Low_complexity 1 42 0 8 666 488 119 36 0 chrUextra 10672289 10672373 -18332283 - NTS_DM Other Other -150 90 4 8 666 6430 3 1 4 chrUextra 10672623 10673380 -18331276 + LSU-rRNA_Dme rRNA rRNA 835 1589 -2311 8 666 4972 27 1 8 chrUextra 10673480 10674150 -18330506 + IDEFIX_I LTR Gypsy 4963 5628 0 8 666 575 35 23 0 chrUextra 10674150 10674237 -18330419 + IDEFIX_LTR LTR Gypsy 1 89 -505 8 666 2113 0 7 3 chrUextra 10674337 10674625 -18330031 + HMSBEAGLE_I LTR Gypsy 499 787 -5742 8 666 764 38 45 15 chrUextra 10674641 10674775 -18329881 + (TTA)n Simple_repeat Simple_repeat 3 140 0 8 666 2608 9 0 0 chrUextra 10674775 10675094 -18329562 + HMSBEAGLE_I LTR Gypsy 976 1294 -5235 8 666 1622 288 45 12 chrUextra 10675210 10675937 -18328719 + MICROPIA_I LTR Gypsy 2535 3285 -1191 8 666 5617 55 7 11 chrUextra 10676051 10676808 -18327848 + R1_DM LINE R1 988 1741 -3615 8 666 2802 180 28 28 chrUextra 10676908 10677658 -18326998 + SAR_DM Satellite Satellite 439 1188 -284 8 666 5441 34 1 0 chrUextra 10677765 10678444 -18326212 + R1_DM LINE R1 2463 3142 -2214 8 666 622 13 0 0 chrUextra 10678447 10678522 -18326134 + R1_DM LINE R1 3275 3349 -2007 8 666 2660 199 27 46 chrUextra 10678623 10679365 -18325291 + TAHRE LINE telomeric 7222 7949 -2514 8 666 1207 84 0 0 chrUextra 10679500 10679703 -18324953 - Stalker2_LTR LTR Gypsy -152 272 52 8 666 249 29 0 0 chrUextra 10679726 10679761 -18324895 - STALKER4_I LTR Gypsy -5 6525 6491 8 666 32 0 0 0 chrUextra 10679761 10679793 -18324863 + AT_rich Low_complexity Low_complexity 1 32 0 8 666 583 282 3 10 chrUextra 10679939 10680236 -18324420 - Gypsy11_I LTR Gypsy -137 3387 3093 8 666 1281 48 0 0 chrUextra 10680562 10680728 -18323928 + G2_DM LINE Jockey 2680 2845 -257 8 666 1361 217 34 17 chrUextra 10680732 10681084 -18323572 - G_DM LINE Jockey -2998 1348 991 8 666 2037 26 4 14 chrUextra 10681193 10681469 -18323187 + FW_DM LINE Jockey 4420 4692 0 8 666 4155 10 2 0 chrUextra 10681439 10681950 -18322706 + NOMAD_I LTR Gypsy 5661 6172 -400 8 666 6071 25 1 4 chrUextra 10682050 10682807 -18321849 + R1_DM LINE R1 3163 3917 -1439 8 666 288 319 32 40 chrUextra 10683196 10683594 -18321062 + BLASTOPIA_I LTR Gypsy 2180 2586 -2302 8 666 5186 12 0 1 chrUextra 10683764 10684424 -18320232 + IDEFIX_I LTR Gypsy 4970 5628 0 8 666 787 10 0 0 chrUextra 10684424 10684521 -18320135 + IDEFIX_LTR LTR Gypsy 1 97 -497 8 666 421 227 77 14 chrUextra 10684657 10684800 -18319856 + HETRP_DM Satellite Satellite 1518 1669 -203 8 666 599 207 7 14 chrUextra 10684948 10685090 -18319566 + HETRP_DM Satellite Satellite 1529 1669 -203 8 666 276 30 0 0 chrUextra 10685221 10685254 -18319402 + (GA)n Simple_repeat Simple_repeat 2 34 0 8 666 427 237 17 9 chrUextra 10685254 10685369 -18319287 + HETRP_DM Satellite Satellite 1549 1664 -208 8 666 946 55 11 18 chrUextra 10685490 10686235 -18318421 + RSP Satellite Satellite 1 739 0 8 666 225 0 0 0 chrUextra 10686335 10686360 -18318296 + (TTGTG)n Simple_repeat Simple_repeat 1 25 0 8 666 6207 8 7 0 chrUextra 10686360 10687092 -18317564 + DMRT1B LINE R1 3536 4272 -911 8 666 6319 3 0 0 chrUextra 10687192 10687949 -18316707 + STALKER4_I LTR Gypsy 2975 3731 -2799 8 666 2032 186 9 5 chrUextra 10688049 10688802 -18315854 + SAR_DM Satellite Satellite 1 755 -677 8 666 1753 187 4 13 chrUextra 10688910 10689346 -18315310 - STALKER4_I LTR Gypsy -6676 726 235 8 666 25 0 0 0 chrUextra 10689370 10689395 -18315261 + AT_rich Low_complexity Low_complexity 1 25 0 8 666 913 77 15 0 chrUextra 10689533 10689663 -18314993 - STALKER4_LTR LTR Gypsy -23 379 248 8 666 2325 18 0 0 chrUextra 10689763 10690044 -18314612 + R1_DM LINE R1 4002 4282 -1074 8 666 3729 29 2 0 chrUextra 10690064 10690520 -18314136 + R1_DM LINE R1 4407 4863 -493 8 666 6224 25 14 0 chrUextra 10690620 10691377 -18313279 - DMCR1A LINE CR1 -2901 1569 802 8 666 3401 140 70 3 chrUextra 10691479 10692226 -18312430 - TART_B1 LINE telomeric -8152 2502 1706 8 666 6121 11 0 9 chrUextra 10692334 10693091 -18311565 + MDG1_I LTR Gypsy 116 865 -5731 8 666 4155 0 4 4 chrUextra 10693191 10693682 -18310974 + LSU-rRNA_Dme rRNA rRNA 1298 1788 -2112 8 666 1906 9 0 0 chrUextra 10693726 10693948 -18310708 + LSU-rRNA_Dme rRNA rRNA 1788 2009 -1891 8 666 5184 14 3 42 chrUextra 10694048 10694538 -18310118 - DM176_I LTR Gypsy -5414 1006 537 8 666 208 28 26 53 chrUextra 10694538 10694576 -18310080 + (TTA)n Simple_repeat Simple_repeat 3 39 0 8 666 5184 14 3 42 chrUextra 10694576 10694804 -18309852 - DM176_I LTR Gypsy -5884 536 316 8 666 660 115 9 0 chrUextra 10694908 10695021 -18309635 - SAR_DM Satellite Satellite -820 652 539 8 666 2812 216 51 25 chrUextra 10695032 10696518 -18308138 - SAR_DM Satellite Satellite -683 1524 1 8 666 231 61 0 0 chrUextra 10696629 10696662 -18307994 + (TC)n Simple_repeat Simple_repeat 2 34 0 8 666 655 186 7 14 chrUextra 10696793 10696935 -18307721 - HETRP_DM Satellite Satellite -203 1669 1529 8 666 512 200 8 16 chrUextra 10697070 10697192 -18307464 - HETRP_DM Satellite Satellite -203 1669 1549 8 666 210 37 0 0 chrUextra 10697192 10697219 -18307437 + (TC)n Simple_repeat Simple_repeat 2 28 0 8 666 3043 181 8 10 chrUextra 10697476 10698185 -18306471 - SAR_DM Satellite Satellite -570 902 195 8 666 605 135 0 0 chrUextra 10698092 10698203 -18306453 + ARS406_DM Unknown Unknown 1 111 -242 8 666 262 0 0 0 chrUextra 10698203 10698233 -18306423 + Gypsy6_LTR LTR Gypsy 1 30 -377 8 666 3105 170 19 28 chrUextra 10698333 10699090 -18305566 - SAR_DM Satellite Satellite -316 1156 407 8 666 6480 0 0 3 chrUextra 10699190 10699947 -18304709 + R1_DM LINE R1 1565 2319 -3037 8 666 6214 11 1 4 chrUextra 10700048 10700803 -18303853 - IDEFIX_I LTR Gypsy -2715 2913 2161 8 666 4505 15 2 0 chrUextra 10700904 10701442 -18303214 + R1_DM LINE R1 4818 5356 0 8 666 1326 71 5 0 chrUextra 10701475 10701659 -18302997 + R1_DM LINE R1 1 185 -5171 8 666 2208 15 0 0 chrUextra 10702618 10702877 -18301779 - MICROPIA_I LTR Gypsy -4217 259 1 8 666 3030 11 2 75 chrUextra 10702877 10703291 -18301365 - MICROPIA_LTR LTR Gypsy 0 476 93 8 666 633 0 0 12 chrUextra 10703294 10703375 -18301281 + ACCORD2_I LTR Gypsy 1081 1160 -6052 8 666 650 97 71 7 chrUextra 10703488 10703643 -18301013 + PROTOP DNA P 542 707 -3773 8 666 402 108 0 0 chrUextra 10703644 10703709 -18300947 + PROTOP DNA P 1009 1073 -3407 8 666 2730 94 113 6 chrUextra 10703705 10704174 -18300482 + PROTOP DNA P 3960 4478 -2 8 666 344 57 38 0 chrUextra 10704176 10704229 -18300427 - DOC LINE Jockey -1054 3671 3617 8 666 2147 4 0 0 chrUextra 10704332 10704582 -18300074 + BLASTOPIA_I LTR Gypsy 4232 4481 0 8 666 2034 15 22 8 chrUextra 10704582 10704849 -18299807 + BLASTOPIA_LTR LTR Gypsy 1 271 -4 8 666 1161 118 0 0 chrUextra 10704849 10705027 -18299629 + (CATA)n Simple_repeat Simple_repeat 3 180 0 8 666 362 115 16 0 chrUextra 10705027 10705088 -18299568 + (TA)n Simple_repeat Simple_repeat 1 62 0 8 666 3553 11 62 0 chrUextra 10705189 10705946 -18298710 + STALKER4_I LTR Gypsy 3142 3945 -2585 8 666 1273 19 0 18 chrUextra 10706083 10706248 -18298408 - NTS_DM Other Other -78 162 1 8 666 1674 38 17 17 chrUextra 10706248 10706488 -18298168 - NTS_DM Other Other 0 240 1 8 666 1488 24 18 32 chrUextra 10706488 10706707 -18297949 - NTS_DM Other Other 0 240 25 8 666 5833 45 8 0 chrUextra 10706903 10707659 -18296997 + R1_DM LINE R1 2710 3471 -1885 8 666 6595 3 0 0 chrUextra 10707760 10708517 -18296139 + BEL_I LTR Pao 3135 3891 -1513 8 666 28 48 0 0 chrUextra 10708659 10708701 -18295955 + AT_rich Low_complexity Low_complexity 1 42 0 8 666 476 131 36 0 chrUextra 10708974 10709058 -18295598 - NTS_DM Other Other -150 90 4 8 666 1301 6 0 18 chrUextra 10709168 10709333 -18295323 - NTS_DM Other Other -78 162 1 8 666 262 358 0 0 chrUextra 10709667 10709878 -18294778 - Invader3_I LTR Gypsy -695 4193 4059 8 666 3012 178 12 9 chrUextra 10710331 10711088 -18293568 - SAR_DM Satellite Satellite -514 758 1 8 666 2965 177 9 9 chrUextra 10712045 10712802 -18291854 - SAR_DM Satellite Satellite -264 1208 195 8 666 4883 105 0 0 chrUextra 10712936 10713659 -18290997 + DMRT1B LINE R1 3134 3856 -1327 8 666 1388 20 20 20 chrUextra 10713759 10713959 -18290697 + NTS_DM Other Other 41 240 0 8 666 1850 4 17 13 chrUextra 10713959 10714198 -18290458 + NTS_DM Other Other 1 240 0 8 666 1831 0 17 17 chrUextra 10714198 10714438 -18290218 + NTS_DM Other Other 1 240 0 8 666 688 0 0 0 chrUextra 10714438 10714516 -18290140 + NTS_DM Other Other 1 78 -162 8 666 3965 0 2 0 chrUextra 10714921 10715373 -18289283 - SSU-rRNA_Dme rRNA rRNA 0 1995 1543 8 666 2747 3 3 0 chrUextra 10715473 10715790 -18288866 + QUASIMODO_I LTR Gypsy 443 760 -5300 8 666 3680 2 0 0 chrUextra 10715790 10716230 -18288426 + QUASIMODO_I LTR Gypsy 4580 5019 -1041 8 666 6576 1 0 1 chrUextra 10716332 10717087 -18287569 + LSU-rRNA_Dme rRNA rRNA 2676 3429 -471 8 666 21 89 0 0 chrUextra 10717778 10717834 -18286822 + AT_rich Low_complexity Low_complexity 1 56 0 8 666 23 68 0 0 chrUextra 10717872 10717916 -18286740 + AT_rich Low_complexity Low_complexity 1 44 0 8 666 5836 48 0 8 chrUextra 10718044 10718801 -18285855 - Jockey2 LINE Jockey -129 3299 2549 8 666 6468 4 0 0 chrUextra 10718901 10719658 -18284998 - R1_DM LINE R1 -1763 3593 2837 8 666 2037 289 11 6 chrUextra 10719776 10720486 -18284170 - ROVER-I_DM LTR Gypsy -4933 1651 938 8 666 252 0 0 0 chrUextra 10721110 10721139 -18283517 - SSU-rRNA_Dme rRNA rRNA 0 1995 1967 8 666 1884 4 9 0 chrUextra 10721146 10721372 -18283284 - SSU-rRNA_Dme rRNA rRNA -347 1648 1421 8 666 6057 5 1 0 chrUextra 10721472 10722229 -18282427 + DM297_I LTR Gypsy 5158 5915 -252 8 666 1203 7 0 0 chrUextra 10722333 10722469 -18282187 + (TTTTG)n Simple_repeat Simple_repeat 2 137 0 8 666 262 111 200 40 chrUextra 10723189 10723390 -18281266 + (CTAAA)n Simple_repeat Simple_repeat 1 233 0 8 666 478 276 0 0 chrUextra 10723394 10723749 -18280907 + (ACTG)n Simple_repeat Simple_repeat 1 355 0 8 666 3046 182 6 10 chrUextra 10724051 10724763 -18279893 - SAR_DM Satellite Satellite -569 903 195 8 666 795 108 0 0 chrUextra 10724670 10724800 -18279856 + ARS406_DM Unknown Unknown 1 130 -223 8 666 1560 11 0 0 chrUextra 10725479 10725657 -18278999 + (TTCTC)n Simple_repeat Simple_repeat 2 179 0 8 666 506 225 70 0 chrUextra 10725862 10726004 -18278652 - HETRP_DM Satellite Satellite -203 1669 1518 8 666 373 194 87 10 chrUextra 10726138 10726242 -18278414 + DNAREP1_DM LINE Penelope 67 178 -416 8 666 1543 41 0 5 chrUextra 10727174 10727371 -18277285 + PROTOP_A DNA P 1 196 -909 8 666 6521 3 0 0 chrUextra 10727471 10728228 -18276428 - R2_DM LINE R2 -2366 1241 485 8 666 1690 113 13 37 chrUextra 10728328 10728650 -18276006 - QUASIMODO_LTR LTR Gypsy -118 540 91 8 666 229 220 0 0 chrUextra 10728805 10728864 -18275792 - TIRANT_I LTR Gypsy -660 7032 6974 8 666 2779 201 16 24 chrUextra 10729188 10729942 -18274714 - SAR_DM Satellite Satellite -593 747 1 8 666 6035 1 1 0 chrUextra 10730103 10730795 -18273861 - SSU-rRNA_Dme rRNA rRNA 0 1995 1303 8 666 6404 11 3 0 chrUextra 10730899 10731656 -18273000 + DOC2_DM LINE Jockey 1960 2718 -2075 8 666 2464 96 29 6 chrUextra 10731782 10732513 -18272143 - DMSAT6 Satellite Satellite -3 747 1 8 666 2247 8 0 0 chrUextra 10732613 10732873 -18271783 + DMRT1B LINE R1 4924 5183 0 8 666 484 83 135 0 chrUextra 10732878 10732974 -18271682 + TART_B1 LINE telomeric 2231 2339 -8315 8 666 3308 28 0 0 chrUextra 10732972 10733370 -18271286 + DMRT1A LINE R1 3602 3999 -1184 8 666 2569 98 7 31 chrUextra 10733470 10733904 -18270752 + QUASIMODO_LTR LTR Gypsy 98 656 -2 8 666 6405 5 0 4 chrUextra 10735184 10735941 -18268715 + G2_DM LINE Jockey 960 1713 -1389 8 666 712 114 7 18 chrUextra 10736053 10736338 -18268318 + RSP Satellite Satellite 1 281 0 8 666 742 124 11 18 chrUextra 10736364 10736798 -18267858 + RSP Satellite Satellite 1 431 0 8 666 2856 191 15 21 chrUextra 10736898 10737652 -18267004 + SAR_DM Satellite Satellite 462 1210 -262 8 666 3414 26 7 7 chrUextra 10737755 10738187 -18266469 + DMRT1A LINE R1 4740 5171 -12 8 666 509 68 0 0 chrUextra 10738190 10738263 -18266393 + CIRCE LINE Composite 4291 4363 -1993 8 666 887 64 8 0 chrUextra 10738261 10738386 -18266270 + CIRCE LINE Composite 4855 4980 -1376 8 666 6433 12 8 0 chrUextra 10738612 10739368 -18265288 + Gypsy4_I LTR Gypsy 624 1385 -4903 8 666 327 85 0 0 chrUextra 10739676 10739723 -18264933 + (TC)n Simple_repeat Simple_repeat 1 47 0 8 666 4872 21 52 0 chrUextra 10740324 10741077 -18263579 - DMRT1B LINE R1 -2393 2790 1999 8 666 4049 2 0 0 chrUextra 10741180 10741647 -18263009 + LSU-rRNA_Dme rRNA rRNA 2113 2579 -1321 8 666 2513 0 0 3 chrUextra 10741647 10741936 -18262720 + R2_DM LINE R2 1 288 -3319 8 666 316 200 0 23 chrUextra 10742038 10742125 -18262531 + XDMR_DM Unknown Unknown 267 351 -9 8 666 2998 172 21 24 chrUextra 10742048 10742791 -18261865 - SAR_DM Satellite Satellite -354 1118 378 8 666 2905 186 10 11 chrUextra 10743755 10744468 -18260188 - SAR_DM Satellite Satellite -569 903 192 8 666 776 121 0 0 chrUextra 10744372 10744504 -18260152 + ARS406_DM Unknown Unknown 1 132 -221 8 666 1105 92 6 33 chrUextra 10744604 10744784 -18259872 - TART LINE telomeric -10619 3858 3684 8 666 3100 101 22 60 chrUextra 10744780 10745360 -18259296 - TART LINE telomeric -11115 3362 2805 8 666 2286 102 17 47 chrUextra 10745461 10746216 -18258440 - DMSAT6 Satellite Satellite -64 732 1 8 666 6056 7 11 13 chrUextra 10746316 10747072 -18257584 + MDG1_I LTR Gypsy 305 1058 -5538 8 666 730 0 0 0 chrUextra 10747172 10747260 -18257396 + ROO_LTR LTR Pao 341 428 0 8 666 3771 4 203 24 chrUextra 10747260 10747803 -18256853 + ROO_I LTR Pao 1 640 -7616 8 666 552 130 0 0 chrUextra 10747803 10747895 -18256761 + (CAG)n Simple_repeat Simple_repeat 1 92 0 8 83 270 0 0 0 chrUextra 10747896 10747928 -18256728 + ROO_I LTR Pao 734 765 -7491 8 667 2726 180 31 28 chrUextra 10748029 10748784 -18255872 + SAR_DM Satellite Satellite 1 757 -261 8 667 1941 0 0 4 chrUextra 10748884 10749116 -18255540 - Copia_I LTR Copia -4362 231 1 8 667 2297 0 0 0 chrUextra 10749116 10749392 -18255264 - Copia_LTR LTR Copia 0 276 1 8 667 3839 2 0 0 chrUextra 10749743 10750186 -18254470 - LSU-rRNA_Dme rRNA rRNA -818 3082 2640 8 667 2643 10 3 0 chrUextra 10750184 10750496 -18254160 - R1_DM LINE R1 0 5356 5044 8 667 2645 209 27 19 chrUextra 10750603 10751348 -18253308 - SAR_DM Satellite Satellite -580 751 1 8 667 1449 0 0 0 chrUextra 10751457 10751618 -18253038 + (CTATT)n Simple_repeat Simple_repeat 3 163 0 8 667 2019 0 0 0 chrUextra 10752308 10752541 -18252115 + R2_DM LINE R2 3375 3607 0 8 667 556 30 0 0 chrUextra 10752545 10752611 -18252045 + LSU-rRNA_Dme rRNA rRNA 2578 2643 -1257 8 667 3867 2 0 0 chrUextra 10752612 10753064 -18251592 + R1_DM LINE R1 2555 3006 -2350 8 667 6419 7 15 0 chrUextra 10753164 10753920 -18250736 - Gypsy4_I LTR Gypsy -2596 3692 2926 8 667 3037 174 34 10 chrUextra 10754040 10754772 -18249884 + SAR_DM Satellite Satellite 326 1075 -397 8 667 6051 29 11 0 chrUextra 10754876 10755632 -18249024 + R1_DM LINE R1 2488 3251 -2105 8 667 3497 123 7 10 chrUextra 10755732 10756488 -18248168 - BATUMI_I LTR Pao -2904 5010 4182 8 667 4242 46 54 0 chrUextra 10756588 10757344 -18247312 + DMCR1A LINE CR1 2312 3108 -1362 8 667 6380 17 0 0 chrUextra 10757444 10758200 -18246456 + FW_DM LINE Jockey 3284 4039 -653 8 667 903 90 11 21 chrUextra 10758308 10759056 -18245600 + RSP Satellite Satellite 1 740 0 8 667 2197 0 0 8 chrUextra 10759156 10759419 -18245237 - Copia_I LTR Copia -4332 261 1 8 667 2297 0 0 0 chrUextra 10759419 10759695 -18244961 - Copia_LTR LTR Copia 0 276 1 8 667 414 49 98 0 chrUextra 10759695 10759777 -18244879 + STALKER4_I LTR Gypsy 6204 6293 -237 8 667 826 28 0 0 chrUextra 10759806 10759912 -18244744 + STALKER4_LTR LTR Gypsy 1 106 -296 8 667 622 26 0 0 chrUextra 10760012 10760090 -18244566 - TLD1 Unknown Unknown -74 122 45 8 667 2756 199 15 25 chrUextra 10760020 10760741 -18243915 - Stalker2_I LTR Gypsy -1626 5776 5063 8 667 5037 87 9 16 chrUextra 10760868 10761624 -18243032 + Gypsy12_I LTR Gypsy 1311 2061 -3485 8 667 4950 3 70 0 chrUextra 10761724 10762480 -18242176 + R1_DM LINE R1 2415 3223 -2133 8 667 2995 182 17 23 chrUextra 10762580 10763332 -18241324 + SAR_DM Satellite Satellite 425 1172 -300 8 667 3933 2 0 2 chrUextra 10764292 10764747 -18239909 - LSU-rRNA_Dme rRNA rRNA -1659 2241 1788 8 667 2099 0 8 4 chrUextra 10764791 10765048 -18239608 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1531 8 667 3222 87 129 25 chrUextra 10765148 10765903 -18238753 - Gypsy12_I LTR Gypsy -4580 966 134 8 667 5359 7 42 0 chrUextra 10766004 10766760 -18237896 + DOC2_DM LINE Jockey 2450 3237 -1556 8 667 1928 4 0 4 chrUextra 10766860 10767097 -18237559 + Copia_LTR LTR Copia 41 276 0 8 667 232 0 0 0 chrUextra 10767097 10767131 -18237525 + Copia_LTR LTR Copia 243 276 0 8 667 4190 0 0 2 chrUextra 10767131 10767616 -18237040 + Copia_I LTR Copia 1 484 -4109 8 667 1613 180 12 18 chrUextra 10768575 10769318 -18235338 - SAR_DM Satellite Satellite -595 738 1 8 667 1129 0 7 0 chrUextra 10769430 10769571 -18235085 + Copia_LTR LTR Copia 135 276 0 8 667 5309 2 0 2 chrUextra 10769571 10770184 -18234472 - DOC LINE Jockey -869 3856 3245 8 667 259 333 102 14 chrUextra 10771534 10771829 -18232827 + BLASTOPIA_I LTR Gypsy 4160 4480 -1 8 667 3184 181 8 8 chrUextra 10772017 10772752 -18231904 - SAR_DM Satellite Satellite -396 1076 342 8 667 870 9 0 27 chrUextra 10772885 10772997 -18231659 + NTS_DM Other Other 25 133 -107 8 667 1252 18 0 6 chrUextra 10772997 10773162 -18231494 + NTS_DM Other Other 38 201 -39 8 667 21 57 0 0 chrUextra 10773162 10773197 -18231459 + AT_rich Low_complexity Low_complexity 1 35 0 8 667 832 9 9 27 chrUextra 10773223 10773334 -18231322 + NTS_DM Other Other 25 133 -107 8 667 817 0 0 0 chrUextra 10773334 10773430 -18231226 + NTS_DM Other Other 38 133 -107 8 667 1260 29 17 6 chrUextra 10773430 10773606 -18231050 + NTS_DM Other Other 38 215 -25 8 667 3603 159 74 5 chrUextra 10773710 10774463 -18230193 + IDEFIX_I LTR Gypsy 2866 3670 -1958 8 667 2117 0 3 86 chrUextra 10774564 10774856 -18229800 - LSU-rRNA_Dme rRNA rRNA -3632 268 1 8 667 21 95 0 0 chrUextra 10774868 10774931 -18229725 + AT_rich Low_complexity Low_complexity 1 63 0 8 667 34 24 0 0 chrUextra 10775144 10775185 -18229471 + AT_rich Low_complexity Low_complexity 1 41 0 8 667 3314 181 8 5 chrUextra 10775421 10776170 -18228486 - SAR_DM Satellite Satellite -396 1076 326 8 667 6316 17 1 0 chrUextra 10776276 10777032 -18227624 + R1_DM LINE R1 1913 2669 -2687 8 667 25 0 0 0 chrUextra 10777227 10777252 -18227404 + AT_rich Low_complexity Low_complexity 1 25 0 8 667 2122 152 52 23 chrUextra 10777276 10777875 -18226781 + Stalker2_I LTR Gypsy 291 954 -5576 8 667 261 149 11 75 chrUextra 10777988 10778082 -18226574 - DNAREP1_DM LINE Penelope -308 286 199 8 667 683 126 112 13 chrUextra 10778080 10778270 -18226386 - DNAREP1_DM LINE Penelope -272 322 90 8 667 1127 94 0 28 chrUextra 10778246 10778422 -18226234 - DNAREP1_DM LINE Penelope -420 174 4 8 667 26 0 0 0 chrUextra 10778487 10778513 -18226143 + AT_rich Low_complexity Low_complexity 1 26 0 8 667 680 233 29 24 chrUextra 10778537 10778744 -18225912 - HOBO DNA hAT 0 3016 2809 8 667 5973 33 0 0 chrUextra 10778844 10779600 -18225056 + MDG1_I LTR Gypsy 3006 3761 -2835 8 667 31 26 0 0 chrUextra 10779738 10779776 -18224880 + AT_rich Low_complexity Low_complexity 1 38 0 8 667 27 29 0 0 chrUextra 10780800 10780834 -18223822 + AT_rich Low_complexity Low_complexity 1 34 0 8 667 250 33 0 0 chrUextra 10781074 10781104 -18223552 + Baggins1 LINE LOA 4727 4756 -697 8 667 693 103 241 0 chrUextra 10781112 10781257 -18223399 + FB4_DM DNA Tc1 3908 4087 -2 8 667 5400 33 56 0 chrUextra 10781412 10782168 -18222488 - R1_DM LINE R1 -1816 3540 2743 8 667 23 0 0 0 chrUextra 10782613 10782636 -18222020 + AT_rich Low_complexity Low_complexity 1 23 0 8 667 599 268 0 0 chrUextra 10783132 10783315 -18221341 - ROVER-I_DM LTR Gypsy -5345 1239 1057 8 667 24 0 0 0 chrUextra 10783430 10783454 -18221202 + AT_rich Low_complexity Low_complexity 1 24 0 8 667 262 191 43 43 chrUextra 10783527 10783642 -18221014 + T-rich Low_complexity Low_complexity 3 117 0 8 667 5309 3 2 2 chrUextra 10783980 10784596 -18220060 - R2_DM LINE R2 -2989 618 3 8 667 1240 0 0 0 chrUextra 10784595 10784736 -18219920 - LSU-rRNA_Dme rRNA rRNA -1319 2581 2441 8 667 2191 190 28 14 chrUextra 10784836 10785385 -18219271 - SAR_DM Satellite Satellite -1093 556 1 8 667 240 23 67 22 chrUextra 10785388 10785433 -18219223 + (TTTAA)n Simple_repeat Simple_repeat 3 49 0 8 667 554 179 65 26 chrUextra 10785433 10785588 -18219068 - SAR_DM Satellite Satellite -430 1042 882 8 667 660 93 68 0 chrUextra 10785474 10785592 -18219064 + ARS406_DM Unknown Unknown 2 127 -226 8 667 3970 106 103 29 chrUextra 10785692 10786448 -18218208 + BATUMI_I LTR Pao 824 1635 -6328 8 667 6170 13 19 9 chrUextra 10786548 10787304 -18217352 - CIRCE LINE Composite -2227 4129 3367 8 667 5057 33 80 3 chrUextra 10787404 10788095 -18216561 - ROOA_I LTR Pao -734 6115 5372 8 667 5883 19 5 4 chrUextra 10789116 10789872 -18214784 - PROTOP_A DNA P -265 840 84 8 667 4063 59 4 4 chrUextra 10789972 10790514 -18214142 - R1_DM LINE R1 -4814 542 1 8 667 1408 34 0 11 chrUextra 10790547 10790728 -18213928 - R1_DM LINE R1 0 5356 5178 8 667 2423 7 0 79 chrUextra 10790828 10791158 -18213498 - LSU-rRNA_Dme rRNA rRNA -3596 304 1 8 667 21 95 0 0 chrUextra 10791170 10791233 -18213423 + AT_rich Low_complexity Low_complexity 1 63 0 8 667 34 24 0 0 chrUextra 10791446 10791487 -18213169 + AT_rich Low_complexity Low_complexity 1 41 0 8 667 5630 49 8 0 chrUextra 10791684 10792437 -18212219 + IDEFIX_I LTR Gypsy 707 1465 -4163 8 667 2932 182 21 27 chrUextra 10792541 10793293 -18211363 + SAR_DM Satellite Satellite 425 1172 -300 8 667 5839 24 26 3 chrUextra 10794252 10795008 -18209648 + PROTOP_A DNA P 106 879 -226 8 667 6505 4 0 0 chrUextra 10795108 10795864 -18208792 + DMRT1B LINE R1 1595 2350 -2833 8 667 3462 241 42 17 chrUextra 10795966 10797576 -18207080 + SAR_DM Satellite Satellite 1 1649 -219 8 667 6111 9 3 5 chrUextra 10797676 10798430 -18206226 + ROO_I LTR Pao 3636 4387 -3869 8 667 28 48 0 0 chrUextra 10798739 10798781 -18205875 + AT_rich Low_complexity Low_complexity 1 42 0 8 667 2988 175 16 19 chrUextra 10799389 10800130 -18204526 - SAR_DM Satellite Satellite -539 933 195 8 667 507 62 41 10 chrUextra 10800045 10800142 -18204514 + ARS406_DM Unknown Unknown 6 105 -248 8 667 1413 44 0 0 chrUextra 10800485 10800763 -18203893 + (CTATT)n Simple_repeat Simple_repeat 1 278 0 8 667 3066 176 14 19 chrUextra 10801956 10802696 -18201960 + SAR_DM Satellite Satellite 383 1118 -354 8 667 324 188 35 12 chrUextra 10802626 10802712 -18201944 - XDMR_DM Unknown Unknown -12 348 261 8 667 3358 170 12 8 chrUextra 10802820 10803568 -18201088 + SAR_DM Satellite Satellite 287 1037 -435 8 667 441 77 0 0 chrUextra 10803668 10803733 -18200923 + ARS406_DM Unknown Unknown 125 189 -164 8 667 2823 203 17 22 chrUextra 10803686 10804424 -18200232 - SAR_DM Satellite Satellite -610 734 1 8 667 226 252 33 26 chrUextra 10804525 10804676 -18199980 + (CTAAA)n Simple_repeat Simple_repeat 3 154 0 8 667 210 259 33 26 chrUextra 10804704 10804855 -18199801 + (CTAAA)n Simple_repeat Simple_repeat 3 154 0 8 667 210 259 33 26 chrUextra 10804883 10805034 -18199622 + (CTAAA)n Simple_repeat Simple_repeat 3 154 0 8 667 203 202 19 66 chrUextra 10805062 10805168 -18199488 + (CTAAA)n Simple_repeat Simple_repeat 3 103 0 8 667 284 139 0 0 chrUextra 10806239 10806282 -18198374 + Gypsy12_I LTR Gypsy 1779 1821 -3725 8 667 3856 82 147 11 chrUextra 10806279 10806992 -18197664 + Gypsy12_I LTR Gypsy 4465 5274 -272 8 667 3233 181 8 8 chrUextra 10807102 10807848 -18196808 + SAR_DM Satellite Satellite 195 940 -532 8 667 515 0 0 0 chrUextra 10807948 10808008 -18196648 - Copia2_I LTR Copia -3951 211 152 8 667 323 291 39 8 chrUextra 10808057 10808185 -18196471 - Copia2_I LTR Copia -3464 698 567 8 667 6622 3 0 0 chrUextra 10808804 10809560 -18195096 - SSU-rRNA_Dme rRNA rRNA -1085 910 155 8 667 4117 0 6 4 chrUextra 10809660 10810150 -18194506 + LSU-rRNA_Dme rRNA rRNA 1298 1788 -2112 8 667 1923 0 5 0 chrUextra 10810194 10810416 -18194240 + LSU-rRNA_Dme rRNA rRNA 1788 2010 -1890 8 667 4293 23 6 0 chrUextra 10811372 10811896 -18192760 + PROTOP DNA P 1076 1602 -2878 8 667 1748 44 8 12 chrUextra 10811876 10812128 -18192528 + PROTOP DNA P 3589 3839 -641 8 667 2112 0 0 0 chrUextra 10812231 10812483 -18192173 - TABOR_I LTR Gypsy -5073 1263 1012 8 667 1945 106 59 64 chrUextra 10812483 10812887 -18191769 + Gypsy6_LTR LTR Gypsy 1 402 -5 8 667 213 39 0 0 chrUextra 10813785 10813811 -18190845 + (GA)n Simple_repeat Simple_repeat 1 26 0 8 667 405 0 0 0 chrUextra 10813940 10813985 -18190671 + (TTGTG)n Simple_repeat Simple_repeat 1 45 0 8 667 5868 11 27 0 chrUextra 10813985 10814696 -18189960 + DMRT1B LINE R1 3536 4265 -918 8 667 5560 20 34 19 chrUextra 10814796 10815552 -18189104 - ROO_I LTR Pao -7163 1093 326 8 667 4129 30 111 9 chrUextra 10815652 10816408 -18188248 - Gypsy12_LTR LTR Gypsy -219 2117 1285 8 667 26 101 0 0 chrUextra 10817173 10817262 -18187394 + AT_rich Low_complexity Low_complexity 1 89 0 8 667 3313 0 0 0 chrUextra 10817364 10817740 -18186916 - LSU-rRNA_Dme rRNA rRNA -1737 2163 1788 8 667 2770 3 9 3 chrUextra 10817784 10818120 -18186536 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1451 8 667 28 48 0 0 chrUextra 10818464 10818506 -18186150 + AT_rich Low_complexity Low_complexity 1 42 0 8 667 446 119 35 35 chrUextra 10818779 10818866 -18185790 - NTS_DM Other Other -150 90 4 8 667 5463 11 0 53 chrUextra 10819076 10819832 -18184824 + LSU-rRNA_Dme rRNA rRNA 39 754 -3146 8 667 2773 193 20 15 chrUextra 10819932 10820688 -18183968 + SAR_DM Satellite Satellite 1 760 -255 8 667 201 74 0 0 chrUextra 10821065 10821092 -18183564 + (CAAAAA)n Simple_repeat Simple_repeat 6 32 0 8 667 2690 185 40 32 chrUextra 10821650 10822400 -18182256 - SAR_DM Satellite Satellite -281 1191 436 8 667 6324 5 0 1 chrUextra 10822500 10823256 -18181400 - STALKER4_I LTR Gypsy -4454 2076 1322 8 667 6597 0 0 0 chrUextra 10824211 10824966 -18179690 + MDG3_I LTR Gypsy 302 1056 -3930 8 667 2991 185 101 20 chrUextra 10825074 10825819 -18178837 + TAHRE LINE telomeric 9536 10340 -123 8 667 2847 89 5 4 chrUextra 10825921 10826676 -18177980 + G_DM LINE Jockey 532 1274 -768 8 667 2272 127 8 12 chrUextra 10826776 10827531 -18177125 + DMSAT6 Satellite Satellite 1 751 -130 8 667 462 194 0 61 chrUextra 10827632 10827747 -18176909 - HETRP_DM Satellite Satellite -247 1625 1518 8 667 655 186 7 14 chrUextra 10827891 10828033 -18176623 - HETRP_DM Satellite Satellite -203 1669 1529 8 667 642 193 7 14 chrUextra 10828169 10828311 -18176345 - HETRP_DM Satellite Satellite -203 1669 1529 8 667 511 31 0 0 chrUextra 10829343 10829408 -18175248 - R1_DM LINE R1 -5291 65 1 8 667 954 26 0 0 chrUextra 10829441 10829555 -18175101 - R1_DM LINE R1 0 5356 5243 8 667 4380 22 4 7 chrUextra 10829552 10830096 -18174560 - R1_DM LINE R1 -290 5066 4525 8 667 5293 22 0 0 chrUextra 10831084 10831721 -18172935 - Copia2_I LTR Copia 0 4162 3526 8 667 1884 39 8 45 chrUextra 10831994 10832260 -18172396 - BLOOD_LTR LTR Gypsy -143 256 1 8 667 2515 15 199 15 chrUextra 10832260 10832661 -18171995 - BLOOD_I LTR Gypsy 0 6613 6139 8 667 1439 226 39 47 chrUextra 10832762 10833515 -18171141 + SAR_DM Satellite Satellite 1 746 -414 8 667 6113 17 20 7 chrUextra 10833616 10834371 -18170285 + SSU-rRNA_Dme rRNA rRNA 439 1203 -792 8 667 242 96 38 19 chrUextra 10834471 10834524 -18170132 - ARS406_DM Unknown Unknown -205 148 95 8 667 3258 179 7 7 chrUextra 10834486 10835221 -18169435 + SAR_DM Satellite Satellite 203 937 -535 8 667 2837 172 38 28 chrUextra 10835338 10836081 -18168575 - SAR_DM Satellite Satellite -313 1159 410 8 667 6195 9 0 0 chrUextra 10836181 10836936 -18167720 + Invader2_I LTR Gypsy 2594 3348 -1244 8 667 6353 17 7 0 chrUextra 10837036 10837791 -18166865 - Gypsy12_I LTR Gypsy -2099 3447 2688 8 667 2930 202 15 23 chrUextra 10837896 10838645 -18166011 + SAR_DM Satellite Satellite 1 743 -208 8 667 1948 184 7 7 chrUextra 10838751 10839501 -18165155 + SAR_DM Satellite Satellite 1 750 -656 8 667 5969 32 1 0 chrUextra 10839601 10840356 -18164300 - STALKER4_I LTR Gypsy -1178 5352 4597 8 667 6182 0 11 0 chrUextra 10840456 10841211 -18163445 + ROO_I LTR Pao 311 1073 -7183 8 667 3859 42 55 12 chrUextra 10841311 10841823 -18162833 - BATUMI_I LTR Pao -1982 5981 5448 8 667 367 40 0 0 chrUextra 10842016 10842066 -18162590 - DMCR1A LINE CR1 0 4470 4421 8 667 322 24 0 0 chrUextra 10842166 10842207 -18162449 + PROTOP_B DNA P 1113 1153 0 8 667 29 60 0 0 chrUextra 10842549 10842599 -18162057 + AT_rich Low_complexity Low_complexity 1 50 0 8 667 23 68 0 0 chrUextra 10842645 10842689 -18161967 + AT_rich Low_complexity Low_complexity 1 44 0 8 667 21 89 0 0 chrUextra 10842727 10842783 -18161873 + AT_rich Low_complexity Low_complexity 1 56 0 8 667 1400 37 0 9 chrUextra 10843262 10843598 -18161058 + (CTTAT)n Simple_repeat Simple_repeat 1 332 0 8 667 21 0 0 0 chrUextra 10844393 10844414 -18160242 + AT_rich Low_complexity Low_complexity 1 21 0 8 667 2960 192 17 24 chrUextra 10844731 10845486 -18159170 + SAR_DM Satellite Satellite 1 749 -208 8 667 1340 6 0 0 chrUextra 10845586 10845743 -18158913 + R2_DM LINE R2 2857 3013 -594 8 667 3462 2 0 0 chrUextra 10845736 10846132 -18158524 + R2_DM LINE R2 3201 3596 -11 8 667 1842 9 0 0 chrUextra 10846128 10846341 -18158315 + LSU-rRNA_Dme rRNA rRNA 2578 2790 -1110 8 667 2955 192 17 23 chrUextra 10846441 10847196 -18157460 + SAR_DM Satellite Satellite 1 750 -208 8 667 6414 0 0 1 chrUextra 10847296 10848051 -18156605 + MDG3_I LTR Gypsy 3828 4581 -405 8 667 2976 198 15 22 chrUextra 10848155 10848906 -18155750 - SAR_DM Satellite Satellite -581 745 1 8 667 6232 8 15 0 chrUextra 10849006 10849759 -18154897 - Gypsy4_I LTR Gypsy -898 5390 4627 8 667 5888 28 4 12 chrUextra 10849861 10850616 -18154040 - BATUMI_I LTR Pao -5656 2307 1559 8 667 6542 1 0 3 chrUextra 10850716 10851471 -18153185 + LSU-rRNA_Dme rRNA rRNA 2735 3487 -413 8 667 3000 178 17 23 chrUextra 10851573 10852326 -18152330 + SAR_DM Satellite Satellite 409 1157 -315 8 667 2546 205 43 9 chrUextra 10852430 10853179 -18151477 + SAR_DM Satellite Satellite 457 1230 -242 8 667 6491 1 0 0 chrUextra 10853281 10854036 -18150620 - DM176_I LTR Gypsy -3383 3037 2283 8 667 351 167 0 23 chrUextra 10854136 10854222 -18150434 + XDMR_DM Unknown Unknown 268 351 -9 8 667 3071 172 50 19 chrUextra 10854145 10854890 -18149766 - SAR_DM Satellite Satellite -353 1119 352 8 667 6367 11 8 0 chrUextra 10854991 10855746 -18148910 - R1_DM LINE R1 -300 5056 4296 8 667 6423 5 8 0 chrUextra 10855846 10856601 -18148055 + Copia2_I LTR Copia 325 1085 -3077 8 667 835 46 8 8 chrUextra 10856701 10856832 -18147824 + IDEFIX_LTR LTR Gypsy 464 594 0 8 667 25 0 0 0 chrUextra 10857024 10857049 -18147607 + AT_rich Low_complexity Low_complexity 1 25 0 8 667 901 44 0 0 chrUextra 10857342 10857456 -18147200 + IDEFIX_I LTR Gypsy 1 114 -5514 8 667 2582 176 9 12 chrUextra 10857563 10858169 -18146487 - SAR_DM Satellite Satellite -514 744 31 8 667 850 60 0 0 chrUextra 10858169 10858286 -18146370 + ARS406_DM Unknown Unknown 73 189 -164 8 667 2582 176 9 12 chrUextra 10858286 10858310 -18146346 - SAR_DM Satellite Satellite -514 30 1 8 667 6343 4 1 0 chrUextra 10858411 10859166 -18145490 + STALKER4_I LTR Gypsy 4827 5582 -948 8 667 28 48 0 0 chrUextra 10859570 10859612 -18145044 + AT_rich Low_complexity Low_complexity 1 42 0 8 667 476 131 36 0 chrUextra 10859885 10859969 -18144687 - NTS_DM Other Other -150 90 4 8 667 5980 31 5 4 chrUextra 10860122 10860872 -18143784 + CIRCE LINE Composite 2879 3629 -2727 8 667 3105 170 11 11 chrUextra 10860983 10861692 -18142964 - SAR_DM Satellite Satellite -569 903 195 8 667 827 98 0 0 chrUextra 10861599 10861731 -18142925 + ARS406_DM Unknown Unknown 1 132 -221 8 667 3176 25 2 0 chrUextra 10861831 10862224 -18142432 + R1_DM LINE R1 4673 5066 -290 8 667 897 53 0 0 chrUextra 10862221 10862335 -18142321 + R1_DM LINE R1 5243 5356 0 8 667 1510 73 18 0 chrUextra 10862368 10862586 -18142070 + R1_DM LINE R1 1 222 -5134 8 667 6512 1 0 0 chrUextra 10862688 10863441 -18141215 + R1_DM LINE R1 1239 1991 -3365 8 667 2614 0 3 48 chrUextra 10863541 10863872 -18140784 + LSU-rRNA_Dme rRNA rRNA 2317 2632 -1268 8 667 3656 0 5 0 chrUextra 10863872 10864296 -18140360 + R1_DM LINE R1 1 426 -4930 8 667 2540 64 0 0 chrUextra 10864686 10865043 -18139613 + IDEFIX_I LTR Gypsy 3829 4185 -1443 8 667 833 19 9 0 chrUextra 10865043 10865151 -18139505 + IDEFIX_LTR LTR Gypsy 1 109 -485 8 667 3355 201 8 3 chrUextra 10865253 10865995 -18138661 - Stalker2_I LTR Gypsy -2858 4544 3799 8 667 5431 33 36 1 chrUextra 10866109 10866861 -18137795 + Gypsy6_I LTR Gypsy 2656 3951 -3061 8 667 6214 26 1 0 chrUextra 10866961 10867715 -18136941 - R1_DM LINE R1 -1572 3784 3030 8 667 27 29 0 0 chrUextra 10868112 10868146 -18136510 + AT_rich Low_complexity Low_complexity 1 34 0 8 667 250 33 0 0 chrUextra 10868385 10868415 -18136241 + Baggins1 LINE LOA 4727 4756 -697 8 667 689 103 240 7 chrUextra 10868423 10868569 -18136087 + FB4_DM DNA Tc1 3908 4087 -2 8 667 6212 11 25 0 chrUextra 10868671 10869426 -18135230 + DMRT1B LINE R1 3889 4662 -521 8 667 6474 1 0 1 chrUextra 10869526 10870281 -18134375 - R1_DM LINE R1 -1664 3692 2939 8 667 374 307 0 0 chrUextra 10870506 10870633 -18134023 + MICROPIA_I LTR Gypsy 3668 3794 -682 8 667 314 299 101 9 chrUextra 10870719 10870932 -18133724 + MICROPIA_I LTR Gypsy 3434 3850 -626 8 667 470 156 22 0 chrUextra 10871041 10871131 -18133525 - PROTOP_B DNA P -200 953 862 8 667 2699 181 11 3 chrUextra 10871236 10871991 -18132665 + SAR_DM Satellite Satellite 1 760 -677 8 667 1829 39 3 96 chrUextra 10872092 10872404 -18132252 + BATUMI_I LTR Pao 7002 7284 -679 8 667 2381 83 82 32 chrUextra 10872404 10872841 -18131815 + BATUMI_I LTR Pao 1 459 -7504 8 667 6495 11 0 0 chrUextra 10872946 10873701 -18130955 + Invader1_I LTR Gypsy 381 1135 -2051 8 667 6562 0 0 3 chrUextra 10873801 10874556 -18130100 + LSU-rRNA_Dme rRNA rRNA 2679 3431 -469 8 667 6105 21 4 1 chrUextra 10875511 10876266 -18128390 - R1_DM LINE R1 -990 4366 3610 8 667 1599 9 0 0 chrUextra 10876584 10876809 -18127847 + (CTTAT)n Simple_repeat Simple_repeat 1 225 0 8 667 329 176 50 100 chrUextra 10877384 10877504 -18127152 - Copia_I LTR Copia -80 4513 4400 8 667 977 198 84 4 chrUextra 10877737 10877975 -18126681 + HETA LINE telomeric 4020 4276 -1805 8 667 6400 1 1 1 chrUextra 10878076 10878831 -18125825 + MDG3_I LTR Gypsy 2757 3511 -1475 8 668 4859 67 59 3 chrUextra 10878995 10879686 -18124970 + Baggins1 LINE LOA 4205 4934 -519 8 668 780 327 51 35 chrUextra 10879815 10880537 -18124119 - HMSBEAGLE_I LTR Gypsy -1747 4782 4049 8 668 335 296 19 19 chrUextra 10880812 10880974 -18123682 - MDG3_I LTR Gypsy -1562 3424 3263 8 668 291 293 32 8 chrUextra 10881260 10881384 -18123272 - Invader3_I LTR Gypsy -1859 3029 2903 8 668 6412 4 1 1 chrUextra 10881496 10882251 -18122405 - R1_DM LINE R1 -1522 3834 3080 8 668 6579 1 0 1 chrUextra 10882351 10883106 -18121550 + SSU-rRNA_Dme rRNA rRNA 379 1132 -863 8 668 915 99 24 42 chrUextra 10883206 10883374 -18121282 - Invader1_LTR LTR Gypsy -257 166 2 8 668 3010 86 78 102 chrUextra 10883375 10883961 -18120695 - Invader1_I LTR Gypsy 0 3186 2615 8 668 6466 5 0 5 chrUextra 10884061 10884816 -18119840 + MICROPIA_I LTR Gypsy 2579 3329 -1147 8 668 3289 170 13 15 chrUextra 10884917 10885668 -18118988 - SAR_DM Satellite Satellite -435 1037 288 8 668 271 0 0 0 chrUextra 10885771 10885802 -18118854 - DM1731_LTR LTR Copia -305 31 1 8 668 1491 170 14 6 chrUextra 10885805 10886526 -18118130 + SAR_DM Satellite Satellite 1 726 -645 8 668 2287 108 21 26 chrUextra 10886658 10887379 -18117277 - DMSAT6 Satellite Satellite -4 716 1 8 668 2861 68 5 17 chrUextra 10887691 10888097 -18116559 + Baggins1 LINE LOA 4791 5191 -262 8 668 1620 0 0 0 chrUextra 10888336 10888653 -18116003 + (GAGAA)n Simple_repeat Simple_repeat 1 317 0 8 668 3252 3 6 3 chrUextra 10889191 10889555 -18115101 + LSU-rRNA_Dme rRNA rRNA 1427 1791 -2109 8 668 3262 0 3 0 chrUextra 10889596 10889946 -18114710 + LSU-rRNA_Dme rRNA rRNA 1788 2138 -1762 8 668 618 26 13 0 chrUextra 10890046 10890122 -18114534 + MDG3_I LTR Gypsy 2427 2503 -2483 8 668 5870 5 0 29 chrUextra 10890121 10890801 -18113855 + DOC6_DM LINE Jockey 1 660 -3562 8 668 528 188 0 0 chrUextra 10890904 10891042 -18113614 + (CATAA)n Simple_repeat Simple_repeat 2 139 0 8 668 3999 2 0 0 chrUextra 10891043 10891471 -18113185 - ROO_LTR LTR Pao 0 428 1 8 668 1602 11 0 0 chrUextra 10891471 10891656 -18113000 - ROO_I LTR Pao 0 8256 8072 8 668 3744 176 7 7 chrUextra 10891756 10892509 -18112147 + SAR_DM Satellite Satellite 304 1056 -416 8 668 1634 43 5 28 chrUextra 10892611 10892828 -18111828 + BATUMI_I LTR Pao 7073 7284 -679 8 668 3083 87 88 28 chrUextra 10892828 10893361 -18111295 + BATUMI_I LTR Pao 1 565 -7398 8 668 2496 97 11 24 chrUextra 10893466 10894221 -18110435 - DMSAT6 Satellite Satellite -37 745 1 8 668 6835 3 5 0 chrUextra 10894321 10895076 -18109580 + FW_DM LINE Jockey 405 1163 -3529 8 668 1292 0 0 0 chrUextra 10895176 10895314 -18109342 - TABOR_LTR LTR Gypsy -368 138 1 8 668 4424 35 4 18 chrUextra 10895314 10895929 -18108727 - TABOR_I LTR Gypsy -108 6789 5603 8 668 5867 38 61 17 chrUextra 10896031 10896786 -18107870 - Baggins1 LINE LOA -37 5416 4629 8 668 6859 3 0 0 chrUextra 10896887 10897641 -18107015 + ROO_I LTR Pao 6063 6816 -1440 8 668 594 143 105 0 chrUextra 10898391 10898496 -18106160 + DNAREP1_DM LINE Penelope 22 137 -457 8 668 1579 128 57 3 chrUextra 10898863 10899145 -18105511 + DNAREP1_DM LINE Penelope 1 297 -297 8 668 257 335 0 16 chrUextra 10899499 10899681 -18104975 + (CAG)n Simple_repeat Simple_repeat 2 180 0 8 668 267 335 0 0 chrUextra 10899862 10900014 -18104642 + (CAG)n Simple_repeat Simple_repeat 2 153 0 8 668 204 349 0 0 chrUextra 10900060 10900206 -18104450 + (CAG)n Simple_repeat Simple_repeat 2 147 0 8 668 1751 170 31 23 chrUextra 10900306 10900692 -18103964 - SAR_DM Satellite Satellite -525 947 559 8 668 3411 3 0 0 chrUextra 10900688 10901061 -18103595 + DOC LINE Jockey 2441 2813 -1912 8 668 1808 141 13 101 chrUextra 10901161 10901539 -18103117 - TART LINE telomeric -7475 7002 6658 8 668 3097 40 0 3 chrUextra 10901536 10901916 -18102740 - TART LINE telomeric -13721 756 378 8 668 5196 31 0 114 chrUextra 10902017 10902771 -18101885 - CIRCE LINE Composite -4580 1776 1109 8 668 3538 10 0 0 chrUextra 10902871 10903258 -18101398 + TABOR_LTR LTR Gypsy 120 506 0 8 668 1620 0 0 0 chrUextra 10903261 10903621 -18101035 + (TTGTG)n Simple_repeat Simple_repeat 1 360 0 8 668 6771 7 0 0 chrUextra 10903726 10904481 -18100175 + STALKER4_I LTR Gypsy 5324 6078 -452 8 668 195 42 0 0 chrUextra 10905163 10905187 -18099469 + (TC)n Simple_repeat Simple_repeat 1 24 0 8 668 6377 27 1 8 chrUextra 10906291 10907045 -18097611 + R1_DM LINE R1 2261 3009 -2347 8 668 302 140 0 0 chrUextra 10908576 10908626 -18096030 - DM297_LTR LTR Gypsy -364 50 1 8 668 700 71 278 0 chrUextra 10908626 10908752 -18095904 - DM297_I LTR Gypsy 0 6167 6007 8 668 267 51 51 0 chrUextra 10908853 10908892 -18095764 - R1_DM LINE R1 -5315 41 1 8 668 5908 28 1 0 chrUextra 10908925 10909607 -18095049 - R1_DM LINE R1 0 5356 4674 8 668 5929 32 8 8 chrUextra 10909707 10910461 -18094195 - DM176_I LTR Gypsy -5446 974 221 8 668 5521 10 2 2 chrUextra 10910561 10911172 -18093484 - LSU-rRNA_Dme rRNA rRNA -1502 2398 1788 8 668 857 10 0 10 chrUextra 10911213 10911315 -18093341 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1691 8 668 1572 216 34 0 chrUextra 10911426 10911745 -18092911 + TIRANT_I LTR Gypsy 2392 2721 -4971 8 668 3753 14 16 0 chrUextra 10911745 10912169 -18092487 + PROTOP_A DNA P 1 431 -674 8 668 5711 60 3 24 chrUextra 10912269 10913019 -18091637 + CIRCE LINE Composite 2100 2833 -3523 8 668 6575 20 21 0 chrUextra 10913123 10913877 -18090779 - R1_DM LINE R1 -2674 2682 1913 8 668 6276 1 0 61 chrUextra 10913977 10914731 -18089925 + LSU-rRNA_Dme rRNA rRNA 1724 2431 -1469 8 668 3293 195 20 11 chrUextra 10914831 10915581 -18089075 + SAR_DM Satellite Satellite 403 1159 -313 8 668 6531 27 0 3 chrUextra 10915692 10916439 -18088217 + BATUMI_I LTR Pao 4315 5059 -2904 8 668 583 293 93 49 chrUextra 10916724 10917292 -18087364 - ROVER-I_DM LTR Gypsy -4702 1882 1290 8 668 3646 172 15 19 chrUextra 10917393 10918147 -18086509 - SAR_DM Satellite Satellite -466 1006 256 8 668 6716 17 0 0 chrUextra 10918247 10919001 -18085655 - DMRT1A LINE R1 -1390 3793 3040 8 668 4553 92 152 1 chrUextra 10919101 10919855 -18084801 - Stalker2_I LTR Gypsy -3592 3810 2943 8 668 3707 28 62 15 chrUextra 10919955 10920419 -18084237 - ROO_I LTR Pao -3578 4678 4193 8 668 2442 28 3 0 chrUextra 10920426 10920709 -18083947 + FW_DM LINE Jockey 1748 2031 -2661 8 668 7035 0 3 0 chrUextra 10920809 10921563 -18083093 + LSU-rRNA_Dme rRNA rRNA 3073 3828 -72 8 668 5311 14 49 41 chrUextra 10921663 10922322 -18082334 + CIRCE LINE Composite 307 970 -5386 8 668 1507 204 3 6 chrUextra 10922538 10922893 -18081763 + DM297_I LTR Gypsy 4381 4734 -1433 8 668 1124 151 0 0 chrUextra 10922891 10923083 -18081573 + DM297_I LTR Gypsy 5490 5681 -486 8 668 936 128 0 0 chrUextra 10923082 10923223 -18081433 + DM176_I LTR Gypsy 6278 6418 -2 8 668 2436 17 0 7 chrUextra 10923371 10923667 -18080989 + TART LINE telomeric 14183 14476 -1 8 668 1247 194 249 15 chrUextra 10923667 10923997 -18080659 + TART LINE telomeric 3623 4029 -10448 8 668 495 207 29 40 chrUextra 10923972 10924125 -18080531 + TART_B1 LINE telomeric 8329 8453 -2201 8 668 791 139 0 0 chrUextra 10924225 10924369 -18080287 - TART_B1 LINE telomeric -8989 1665 1522 8 668 2856 98 4 57 chrUextra 10924390 10924846 -18079810 - TART LINE telomeric -8723 5754 5323 8 668 993 137 0 0 chrUextra 10924826 10924979 -18079677 - TART LINE telomeric -10594 3883 3731 8 668 813 75 75 8 chrUextra 10925079 10925213 -18079443 + R1_DM LINE R1 591 733 -4623 8 668 5318 42 0 0 chrUextra 10925209 10925833 -18078823 + R1_DM LINE R1 1224 1847 -3509 8 668 7040 3 0 0 chrUextra 10925933 10926687 -18077969 + LSU-rRNA_Dme rRNA rRNA 2460 3213 -687 8 668 996 17 0 0 chrUextra 10926787 10926905 -18077751 + (GAGAA)n Simple_repeat Simple_repeat 2 119 0 8 668 3990 2 0 0 chrUextra 10926905 10927332 -18077324 + ROO_LTR LTR Pao 1 427 -1 8 668 1620 0 0 0 chrUextra 10927332 10927539 -18077117 + (GAGAA)n Simple_repeat Simple_repeat 1 207 0 8 668 639 0 0 0 chrUextra 10928495 10928566 -18076090 + (CAAGA)n Simple_repeat Simple_repeat 1 71 0 8 668 7046 0 1 0 chrUextra 10929350 10930103 -18074553 - LSU-rRNA_Dme rRNA rRNA -400 3500 2747 8 668 6849 7 15 0 chrUextra 10930203 10930957 -18073699 - Gypsy4_I LTR Gypsy -2662 3626 2862 8 668 265 235 0 0 chrUextra 10931058 10931109 -18073547 + Gypsy12A_LTR LTR Gypsy 414 464 -1816 8 668 1518 269 29 73 chrUextra 10931121 10931776 -18072880 + Gypsy12_LTR LTR Gypsy 524 1149 -1187 8 668 27 0 0 0 chrUextra 10931782 10931809 -18072847 + AT_rich Low_complexity Low_complexity 1 27 0 8 668 6689 7 0 1 chrUextra 10931924 10932665 -18071991 - DMRT1B LINE R1 -2785 2398 1659 8 668 1752 307 45 19 chrUextra 10932768 10933501 -18071155 + MICROPIA_I LTR Gypsy 1910 2661 -1815 8 668 922 18 0 27 chrUextra 10933624 10933736 -18070920 + NTS_DM Other Other 25 133 -107 8 668 1325 30 0 6 chrUextra 10933736 10933901 -18070755 + NTS_DM Other Other 38 201 -39 8 668 21 57 0 0 chrUextra 10933901 10933936 -18070720 + AT_rich Low_complexity Low_complexity 1 35 0 8 668 870 28 9 27 chrUextra 10933962 10934073 -18070583 + NTS_DM Other Other 25 133 -107 8 668 876 0 0 0 chrUextra 10934073 10934169 -18070487 + NTS_DM Other Other 38 133 -107 8 668 1488 20 25 20 chrUextra 10934169 10934371 -18070285 + NTS_DM Other Other 38 240 0 8 668 2084 184 8 5 chrUextra 10934473 10935209 -18069447 - SAR_DM Satellite Satellite -673 737 1 8 668 6693 7 0 3 chrUextra 10935327 10936081 -18068575 - MDG3_I LTR Gypsy -1642 3344 2593 8 668 876 30 30 30 chrUextra 10936181 10936316 -18068340 + NTS_DM Other Other 106 240 0 8 668 1995 4 17 13 chrUextra 10936316 10936555 -18068101 + NTS_DM Other Other 1 240 0 8 668 1992 4 17 13 chrUextra 10936555 10936794 -18067862 + NTS_DM Other Other 1 240 0 8 668 1219 14 7 0 chrUextra 10936794 10936935 -18067721 + NTS_DM Other Other 1 142 -98 8 668 201 121 0 0 chrUextra 10937692 10937725 -18066931 + (GA)n Simple_repeat Simple_repeat 1 33 0 8 668 3502 187 13 9 chrUextra 10937889 10938643 -18066013 - SAR_DM Satellite Satellite -495 977 221 8 668 4815 6 0 0 chrUextra 10938977 10939497 -18065159 - Invader1_I LTR Gypsy -1349 1837 1318 8 668 385 179 0 23 chrUextra 10939597 10939683 -18064973 + XDMR_DM Unknown Unknown 268 351 -9 8 668 3130 173 11 63 chrUextra 10939606 10940348 -18064308 - SAR_DM Satellite Satellite -354 1118 416 8 668 3024 193 32 24 chrUextra 10940451 10941199 -18063457 + SAR_DM Satellite Satellite 428 1181 -291 8 668 6513 33 0 0 chrUextra 10941305 10942059 -18062597 - BATUMI_I LTR Pao -2704 5259 4506 8 668 1173 73 0 0 chrUextra 10942162 10942340 -18062316 + (CTTAT)n Simple_repeat Simple_repeat 1 178 0 8 668 186 43 0 0 chrUextra 10942340 10942363 -18062293 + (TTTTC)n Simple_repeat Simple_repeat 1 23 0 8 668 225 295 43 43 chrUextra 10943451 10943568 -18061088 - Copia2_I LTR Copia -1948 2214 2098 8 668 288 311 53 13 chrUextra 10943598 10943748 -18060908 - Copia_I LTR Copia -2477 2116 1961 8 668 5076 53 1 50 chrUextra 10943867 10944621 -18060035 + BATUMI_I LTR Pao 2423 3139 -4824 8 668 6617 0 1 0 chrUextra 10944721 10945475 -18059181 + R2_DM LINE R2 1874 2628 -979 8 668 2051 295 12 12 chrUextra 10945575 10946323 -18058333 + FROGGER_I LTR Copia 783 1530 -547 8 668 3456 0 0 2 chrUextra 10946430 10946829 -18057827 + LSU-rRNA_Dme rRNA rRNA 2235 2632 -1268 8 668 3050 0 6 0 chrUextra 10946829 10947183 -18057473 + R1_DM LINE R1 1 356 -5000 8 668 6473 0 1 4 chrUextra 10947283 10948037 -18056619 - SSU-rRNA_Dme rRNA rRNA -516 1479 728 8 668 1491 6 0 0 chrUextra 10948137 10948316 -18056340 - NTS_DM Other Other -61 179 1 8 668 1826 8 17 13 chrUextra 10948316 10948555 -18056101 - NTS_DM Other Other 0 240 1 8 668 2473 7 0 0 chrUextra 10948605 10948891 -18055765 - R1_DM LINE R1 -775 4581 4296 8 668 6506 0 0 0 chrUextra 10948991 10949745 -18054911 - BLOOD_I LTR Gypsy -1687 4926 4173 8 668 6511 3 0 3 chrUextra 10950699 10951453 -18053203 - LSU-rRNA_Dme rRNA rRNA -518 3382 2631 8 668 381 259 0 9 chrUextra 10951553 10951662 -18052994 + Invader1_I LTR Gypsy 1988 2095 -1091 8 668 559 235 7 7 chrUextra 10951662 10951816 -18052840 + Invader1_I LTR Gypsy 2416 2569 -617 8 668 3276 179 16 9 chrUextra 10952407 10953161 -18051495 + SAR_DM Satellite Satellite 247 1005 -467 8 668 6410 3 0 0 chrUextra 10954115 10954869 -18049787 - ROO_I LTR Pao -1769 6487 5734 8 668 3387 150 12 17 chrUextra 10954971 10955622 -18049034 + TAHRE LINE telomeric 9807 10454 -9 8 668 213 109 0 52 chrUextra 10955625 10955683 -18048973 + (TAAA)n Simple_repeat Simple_repeat 3 57 0 8 668 239 154 0 0 chrUextra 10955823 10955862 -18048794 - LSU-rRNA_Dme rRNA rRNA -1281 2619 2581 8 668 22 56 0 0 chrUextra 10955867 10955903 -18048753 + AT_rich Low_complexity Low_complexity 1 36 0 8 668 5226 2 2 2 chrUextra 10955975 10956577 -18048079 - LSU-rRNA_Dme rRNA rRNA 0 3900 3299 8 668 1064 30 0 0 chrUextra 10956677 10956810 -18047846 - DMRT1B LINE R1 -2136 3047 2915 8 668 5311 10 0 0 chrUextra 10956804 10957431 -18047225 - DMRT1B LINE R1 -2373 2810 2184 8 668 332 25 0 0 chrUextra 10959239 10959279 -18045377 - NTS_DM Other Other -200 40 1 8 668 1731 21 17 17 chrUextra 10959279 10959519 -18045137 - NTS_DM Other Other 0 240 1 8 668 1756 17 17 17 chrUextra 10959519 10959759 -18044897 - NTS_DM Other Other 0 240 1 8 668 820 11 365 17 chrUextra 10959759 10959937 -18044719 - NTS_DM Other Other 0 240 1 8 668 318 0 71 54 chrUextra 10959937 10959993 -18044663 - NTS_DM Other Other 0 240 184 8 668 4869 42 88 5 chrUextra 10960093 10960847 -18043809 + IDEFIX_I LTR Gypsy 1418 2233 -3395 8 668 2476 151 43 35 chrUextra 10960947 10961546 -18043110 + SAR_DM Satellite Satellite 195 798 -674 8 668 320 260 46 33 chrUextra 10961543 10961694 -18042962 - XDMR_DM Unknown Unknown 0 360 208 8 668 645 113 26 0 chrUextra 10961586 10961701 -18042955 + SAR_DM Satellite Satellite 369 486 -986 8 668 1289 137 85 0 chrUextra 10961801 10962049 -18042607 + MAX_LTR LTR Pao 53 321 0 8 668 33 0 0 0 chrUextra 10962126 10962159 -18042497 + AT_rich Low_complexity Low_complexity 1 33 0 8 668 23 68 0 0 chrUextra 10962205 10962249 -18042407 + AT_rich Low_complexity Low_complexity 1 44 0 8 668 27 81 0 0 chrUextra 10962280 10962342 -18042314 + AT_rich Low_complexity Low_complexity 1 62 0 8 668 545 320 63 6 chrUextra 10962986 10963319 -18041337 + Gypsy5_I LTR Gypsy 2195 2546 -3963 8 668 268 238 0 0 chrUextra 10963323 10963386 -18041270 + Gypsy5_I LTR Gypsy 2747 2809 -3700 8 668 3164 0 0 11 chrUextra 10963509 10963884 -18040772 - TART LINE telomeric -3051 11426 11056 8 668 462 230 32 38 chrUextra 10963886 10964044 -18040612 - TART LINE telomeric -2169 8485 8329 8 668 864 176 270 13 chrUextra 10964019 10964249 -18040407 - TART LINE telomeric -10448 4029 3741 8 668 6596 3 0 0 chrUextra 10964365 10965117 -18039539 - R2_DM LINE R2 -1308 2299 1548 8 668 6026 16 16 12 chrUextra 10965217 10965971 -18038685 + FW_DM LINE Jockey 1412 2168 -2524 8 668 6081 3 16 4 chrUextra 10966071 10966825 -18037831 - MAX_I LTR Pao -6416 1498 736 8 668 362 97 0 16 chrUextra 10966925 10966988 -18037668 - ARS406_DM Unknown Unknown -291 62 1 8 668 3097 179 12 10 chrUextra 10966948 10967679 -18036977 + SAR_DM Satellite Satellite 246 978 -494 8 668 3650 0 0 0 chrUextra 10967779 10968192 -18036464 - HOBO DNA hAT -2603 413 1 8 668 2826 24 0 0 chrUextra 10968192 10968533 -18036123 + Invader3_I LTR Gypsy 3656 3996 -892 8 668 4935 0 0 2 chrUextra 10968633 10969216 -18035440 - MICROPIA_I LTR Gypsy -12 4464 3883 8 668 1518 11 0 0 chrUextra 10969211 10969387 -18035269 - MICROPIA_I LTR Gypsy -1066 3410 3235 8 668 407 280 12 12 chrUextra 10969955 10970125 -18034531 + Copia_I LTR Copia 2054 2223 -2370 8 668 2984 192 21 10 chrUextra 10970354 10971095 -18033561 + SAR_DM Satellite Satellite 1 749 -396 8 668 6071 9 44 0 chrUextra 10972049 10972803 -18031853 + Gypsy4_I LTR Gypsy 4560 5346 -942 8 668 5233 0 0 0 chrUextra 10972903 10973506 -18031150 + QUASIMODO_LTR LTR Gypsy 56 658 0 8 668 1294 0 7 0 chrUextra 10973506 10973657 -18030999 + QUASIMODO_I LTR Gypsy 1 152 -5908 8 668 6263 16 0 7 chrUextra 10973757 10974511 -18030145 - DOC2_DM LINE Jockey -470 4323 3575 8 668 1449 0 0 0 chrUextra 10975204 10975365 -18029291 + (TTCTC)n Simple_repeat Simple_repeat 2 162 0 8 668 5151 51 6 3 chrUextra 10975465 10976219 -18028437 - G2_DM LINE Jockey -2499 603 4 8 668 4617 106 49 7 chrUextra 10976323 10977073 -18027583 - TART LINE telomeric -8252 6225 5444 8 668 3043 44 3 0 chrUextra 10977460 10977844 -18026812 - DIVER2_LTR LTR Pao 0 385 1 8 668 653 36 0 0 chrUextra 10977844 10977927 -18026729 - DIVER2_I LTR Pao 0 4147 4065 8 668 6421 0 0 0 chrUextra 10978027 10978781 -18025875 + DOC LINE Jockey 595 1348 -3377 8 668 6407 1 1 7 chrUextra 10978881 10979635 -18025021 + LSU-rRNA_Dme rRNA rRNA 794 1543 -2357 8 668 2193 181 93 12 chrUextra 10979737 10980340 -18024316 + SAR_DM Satellite Satellite 425 1076 -396 8 668 597 162 0 15 chrUextra 10980353 10980485 -18024171 + SAR_DM Satellite Satellite 766 895 -577 8 668 6119 30 1 0 chrUextra 10981443 10982197 -18022459 + R1_DM LINE R1 2656 3410 -1946 8 668 667 23 0 34 chrUextra 10982299 10982388 -18022268 - NTS_DM Other Other -130 110 25 8 668 1252 18 0 6 chrUextra 10982440 10982605 -18022051 - NTS_DM Other Other -39 201 38 8 668 870 9 0 27 chrUextra 10982605 10982717 -18021939 - NTS_DM Other Other -107 133 25 8 668 1252 18 0 6 chrUextra 10982769 10982934 -18021722 - NTS_DM Other Other -39 201 38 8 668 833 9 9 27 chrUextra 10982934 10983045 -18021611 - NTS_DM Other Other -107 133 25 8 668 2762 21 179 0 chrUextra 10983151 10983284 -18021372 + TART LINE telomeric 7583 7722 -6755 8 668 549 55 0 0 chrUextra 10983284 10983357 -18021299 + (TAAAG)n Simple_repeat Simple_repeat 3 75 0 8 668 2762 21 179 0 chrUextra 10983357 10983609 -18021047 + TART LINE telomeric 7723 8035 -6442 8 668 1504 27 37 0 chrUextra 10983608 10983796 -18020860 + TART LINE telomeric 7528 7722 -6755 8 668 549 55 0 0 chrUextra 10983796 10983869 -18020787 + (TAAAG)n Simple_repeat Simple_repeat 3 75 0 8 668 257 0 0 0 chrUextra 10983869 10983905 -18020751 + TART LINE telomeric 7786 7821 -6656 8 668 6184 15 0 4 chrUextra 10984005 10984759 -18019897 + STALKER4_I LTR Gypsy 1568 2318 -4212 8 668 6454 0 0 0 chrUextra 10984859 10985613 -18019043 + BLOOD_I LTR Gypsy 5286 6039 -574 8 668 28 48 0 0 chrUextra 10986266 10986308 -18018348 + AT_rich Low_complexity Low_complexity 1 42 0 8 668 5800 1 4 6 chrUextra 10986628 10987321 -18017335 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1097 8 668 1000 53 0 0 chrUextra 10987421 10987553 -18017103 + CIRCE LINE Composite 4849 4980 -1376 8 668 1803 64 19 11 chrUextra 10987907 10988175 -18016481 + CIRCE LINE Composite 4981 5250 -1106 8 668 6389 0 0 1 chrUextra 10988278 10989029 -18015627 - LSU-rRNA_Dme rRNA rRNA -2690 1210 461 8 668 3733 164 1 3 chrUextra 10989198 10989883 -18014773 - ROVER-I_DM LTR Gypsy -1276 5308 4625 8 668 3770 191 1 0 chrUextra 10989983 10990735 -18013921 + ROVER-I_DM LTR Gypsy 3277 4029 -2555 8 668 5830 50 1 1 chrUextra 10990837 10991591 -18013065 - R1_DM LINE R1 -3585 1771 1018 8 668 719 12 0 0 chrUextra 10991691 10991776 -18012880 + DM176_LTR LTR Gypsy 199 283 -224 8 668 2020 20 16 0 chrUextra 10991777 10992030 -18012626 + DM176_LTR LTR Gypsy 251 507 0 8 668 1124 25 0 0 chrUextra 10992032 10992193 -18012463 + ACCORD2_I LTR Gypsy 1862 2022 -5190 8 668 2151 8 0 0 chrUextra 10992194 10992445 -18012211 + ACCORD2_I LTR Gypsy 2450 2700 -4512 8 668 802 62 62 14 chrUextra 10992545 10992691 -18011965 + IDEFIX_LTR LTR Gypsy 442 594 0 8 668 25 0 0 0 chrUextra 10992882 10992907 -18011749 + AT_rich Low_complexity Low_complexity 1 25 0 8 668 315 50 0 0 chrUextra 10993177 10993217 -18011439 + IDEFIX_I LTR Gypsy 1 40 -5588 8 668 595 49 0 0 chrUextra 10993217 10993299 -18011357 + DMCR1A LINE CR1 4237 4318 -152 8 668 946 29 51 0 chrUextra 10993399 10993536 -18011120 + DOC2_DM LINE Jockey 1304 1447 -3346 8 668 4791 14 20 2 chrUextra 10993520 10994106 -18010550 + DOC2_DM LINE Jockey 1556 2152 -2641 8 668 293 0 0 0 chrUextra 10994119 10994153 -18010503 + DOC2_DM LINE Jockey 2223 2256 -2537 8 668 1229 20 0 0 chrUextra 10994253 10994402 -18010254 - FW_DM LINE Jockey -4543 149 1 8 668 653 76 76 0 chrUextra 10995112 10995217 -18009439 - DM176_I LTR Gypsy -3948 2472 2360 8 668 339 105 0 0 chrUextra 10995245 10995302 -18009354 + (TAA)n Simple_repeat Simple_repeat 3 59 0 8 668 1906 88 74 3 chrUextra 10995304 10995602 -18009054 + MDG1_LTR LTR Gypsy 94 412 -30 8 668 1870 31 16 12 chrUextra 10995603 10995861 -18008795 + DMCR1A LINE CR1 1 259 -4211 8 668 5233 28 49 9 chrUextra 10996023 10996715 -18007941 - BATUMI_I LTR Pao -5356 2607 1888 8 668 1281 7 0 0 chrUextra 10996818 10996967 -18007689 + ROO_LTR LTR Pao 280 428 0 8 668 5027 0 15 0 chrUextra 10996967 10997568 -18007088 + ROO_I LTR Pao 1 610 -7646 8 668 6341 7 3 1 chrUextra 10997668 10998421 -18006235 - R1_DM LINE R1 -848 4508 3755 8 668 268 125 0 0 chrUextra 10998521 10998569 -18006087 - ARS406_DM Unknown Unknown -305 48 1 8 668 3269 171 12 11 chrUextra 10998529 10999274 -18005382 + SAR_DM Satellite Satellite 246 991 -481 8 668 597 156 16 24 chrUextra 10999384 10999509 -18005147 + HETRP_DM Satellite Satellite 1546 1669 -203 8 668 296 174 250 42 chrUextra 10999667 10999763 -18004893 + HETRP_DM Satellite Satellite 1519 1634 -238 8 668 787 170 6 19 chrUextra 10999811 10999967 -18004689 + HETRP_DM Satellite Satellite 1516 1669 -203 8 668 950 67 0 0 chrUextra 11000227 11000361 -18004295 + TART LINE telomeric 1726 1859 -12618 8 668 4739 48 11 0 chrUextra 11000352 11000980 -18003676 + TART LINE telomeric 2045 2679 -11798 8 668 332 304 0 0 chrUextra 11001110 11001222 -18003434 - G5_DM LINE Jockey -4077 779 668 8 668 1506 123 25 0 chrUextra 11001585 11001828 -18002828 + BS2 LINE Jockey 1332 1580 -3141 8 668 6255 20 12 0 chrUextra 11001933 11002686 -18001970 - CIRCE LINE Composite -16 6340 5579 8 668 5794 52 1 4 chrUextra 11002786 11003539 -18001117 + MAX_I LTR Pao 2328 3078 -4836 8 668 3255 179 8 15 chrUextra 11003642 11004390 -18000266 + SAR_DM Satellite Satellite 369 1111 -361 8 668 21 89 0 0 chrUextra 11004723 11004779 -17999877 + AT_rich Low_complexity Low_complexity 1 56 0 8 668 23 68 0 0 chrUextra 11004817 11004861 -17999795 + AT_rich Low_complexity Low_complexity 1 44 0 8 668 29 60 0 0 chrUextra 11004907 11004957 -17999699 + AT_rich Low_complexity Low_complexity 1 50 0 8 668 692 31 21 0 chrUextra 11005345 11005441 -17999215 - BATUMI_I LTR Pao -1285 6678 6581 8 668 2732 67 127 5 chrUextra 11005491 11006068 -17998588 + BATUMI_I LTR Pao 7303 7949 -14 8 668 5727 35 5 11 chrUextra 11007051 11007804 -17996852 + BATUMI_I LTR Pao 3042 3790 -4173 8 668 1309 146 22 18 chrUextra 11008759 11009032 -17995624 + MDG1_LTR LTR Gypsy 139 412 -30 8 668 1828 163 37 6 chrUextra 11009033 11009510 -17995146 + BS3_DM LINE Jockey 1 278 -1512 8 83 5947 44 0 0 chrUextra 11009612 11010360 -17994296 + BATUMI_I LTR Pao 4406 5153 -2810 8 669 2628 20 3 0 chrUextra 11010463 11010804 -17993852 - PROTOP DNA P -337 4143 3802 8 669 2776 39 43 10 chrUextra 11010799 11011216 -17993440 - PROTOP DNA P -3657 823 393 8 669 1546 74 0 0 chrUextra 11011317 11011533 -17993123 - MAX_LTR LTR Pao -105 216 1 8 669 4014 45 0 0 chrUextra 11011539 11012069 -17992587 - MAX_I LTR Pao -2 7912 7383 8 669 655 186 7 14 chrUextra 11012210 11012352 -17992304 - HETRP_DM Satellite Satellite -203 1669 1529 8 669 629 193 7 14 chrUextra 11012487 11012629 -17992027 - HETRP_DM Satellite Satellite -203 1669 1529 8 669 662 200 6 19 chrUextra 11012753 11012911 -17991745 - HETRP_DM Satellite Satellite -188 1684 1529 8 669 6308 16 1 0 chrUextra 11013022 11013775 -17990881 + DMRT1A LINE R1 3229 3982 -1201 8 669 237 172 15 15 chrUextra 11013875 11013940 -17990716 + XDMR Unknown Unknown 297 361 0 8 669 3080 176 16 19 chrUextra 11013884 11014627 -17990029 - SAR_DM Satellite Satellite -354 1118 378 8 669 6600 1 0 0 chrUextra 11014728 11015481 -17989175 + LSU-rRNA_Dme rRNA rRNA 2709 3461 -439 8 669 5549 46 47 1 chrUextra 11015588 11016334 -17988322 - R1_DM LINE R1 -3897 1459 680 8 669 1039 16 0 0 chrUextra 11016434 11016563 -17988093 - Copia_LTR LTR Copia -147 129 1 8 669 1850 4 17 13 chrUextra 11016583 11016822 -17987834 + NTS_DM Other Other 1 240 0 8 669 1861 0 17 13 chrUextra 11016822 11017061 -17987595 + NTS_DM Other Other 1 240 0 8 669 1034 0 8 0 chrUextra 11017061 11017184 -17987472 + NTS_DM Other Other 1 124 -116 8 669 37 39 0 0 chrUextra 11017333 11017384 -17987272 + AT_rich Low_complexity Low_complexity 1 51 0 8 669 22 35 0 0 chrUextra 11017485 11017514 -17987142 + AT_rich Low_complexity Low_complexity 1 29 0 8 669 21 57 0 0 chrUextra 11017704 11017739 -17986917 + AT_rich Low_complexity Low_complexity 1 35 0 8 669 2025 0 0 0 chrUextra 11017739 11017979 -17986677 + ALUII_DM Unknown Unknown 1 240 0 8 669 3618 0 0 0 chrUextra 11018140 11018553 -17986103 + LSU-rRNA_Dme rRNA rRNA 2226 2638 -1262 8 669 2943 6 0 0 chrUextra 11018550 11018893 -17985763 + R1_DM LINE R1 4840 5182 -174 8 669 6311 11 1 7 chrUextra 11018993 11019746 -17984910 - MICROPIA_I LTR Gypsy -952 3524 2776 8 669 229 143 20 0 chrUextra 11019913 11019962 -17984694 - RSP Satellite Satellite -9 109 60 8 669 229 143 20 0 chrUextra 11020078 11020127 -17984529 - RSP Satellite Satellite -9 109 60 8 669 229 143 20 0 chrUextra 11020244 11020293 -17984363 - RSP Satellite Satellite -9 109 60 8 669 229 143 20 0 chrUextra 11020410 11020459 -17984197 - RSP Satellite Satellite -9 109 60 8 669 5507 1 0 37 chrUextra 11020699 11021395 -17983261 - LSU-rRNA_Dme rRNA rRNA -3230 670 1 8 669 34 24 0 0 chrUextra 11021920 11021961 -17982695 + AT_rich Low_complexity Low_complexity 1 41 0 8 669 21 95 0 0 chrUextra 11022174 11022237 -17982419 + AT_rich Low_complexity Low_complexity 1 63 0 8 669 421 0 0 18 chrUextra 11022250 11022305 -17982351 + LSU-rRNA_Dme rRNA rRNA 2 55 -3845 8 669 272 208 149 106 chrUextra 11022405 11022566 -17982090 + HETA LINE telomeric 5556 5723 -358 8 669 518 108 81 0 chrUextra 11022566 11022677 -17981979 + TART LINE telomeric 10370 10489 -3988 8 669 34 24 0 0 chrUextra 11022690 11022731 -17981925 + AT_rich Low_complexity Low_complexity 1 41 0 8 669 432 125 0 0 chrUextra 11023258 11023330 -17981326 - DNAREP1_DM LINE Penelope -522 72 1 8 669 22 56 0 0 chrUextra 11023917 11023953 -17980703 + AT_rich Low_complexity Low_complexity 1 36 0 8 669 6431 8 0 0 chrUextra 11024111 11024864 -17979792 - DM1731_I LTR Copia -3183 793 41 8 669 3364 182 5 7 chrUextra 11025817 11026568 -17978088 - SAR_DM Satellite Satellite -486 986 237 8 669 6122 12 3 0 chrUextra 11026671 11027423 -17977233 + DM176_I LTR Gypsy 1927 2680 -3740 8 669 4818 2 0 0 chrUextra 11027524 11028075 -17976581 - LSU-rRNA_Dme rRNA rRNA -710 3190 2640 8 669 1693 10 0 5 chrUextra 11028073 11028276 -17976380 - R1_DM LINE R1 0 5356 5155 8 669 3029 178 19 23 chrUextra 11028376 11029127 -17975529 + SAR_DM Satellite Satellite 412 1159 -313 8 669 6451 1 0 0 chrUextra 11030082 11030835 -17973821 + ROO_I LTR Pao 5980 6732 -1524 8 669 488 119 36 0 chrUextra 11031207 11031291 -17973365 - NTS_DM Other Other -150 90 4 8 669 1301 6 0 18 chrUextra 11031401 11031566 -17973090 - NTS_DM Other Other -78 162 1 8 669 804 17 33 25 chrUextra 11031566 11031688 -17972968 - NTS_DM Other Other 0 240 118 8 669 3295 167 49 17 chrUextra 11031788 11032535 -17972121 - SAR_DM Satellite Satellite -436 770 1 8 669 256 128 0 0 chrUextra 11032494 11032541 -17972115 + ARS406_DM Unknown Unknown 1 47 -306 8 669 5603 48 3 4 chrUextra 11032641 11033387 -17971269 + STALKER4_I LTR Gypsy 4432 5176 -1354 8 669 6095 9 7 0 chrUextra 11033512 11034247 -17970409 + FW_DM LINE Jockey 2600 3339 -1353 8 669 3314 171 32 7 chrUextra 11034348 11035100 -17969556 - SAR_DM Satellite Satellite -435 1037 267 8 669 305 279 107 89 chrUextra 11035470 11035750 -17968906 - Invader1_LTR LTR Gypsy -55 368 84 8 669 5860 41 25 0 chrUextra 11036054 11036806 -17967850 - DMCR1A LINE CR1 -2654 1816 1046 8 669 657 104 0 0 chrUextra 11036906 11037012 -17967644 - ARS406_DM Unknown Unknown -247 106 1 8 669 3227 179 8 9 chrUextra 11036919 11037659 -17966997 + SAR_DM Satellite Satellite 195 933 -539 8 669 6024 17 23 0 chrUextra 11037763 11038512 -17966144 + ROO_I LTR Pao 1048 1813 -6443 8 669 6283 15 0 7 chrUextra 11038612 11039365 -17965291 - BATUMI_I LTR Pao -1557 6406 5659 8 669 6554 3 0 1 chrUextra 11039465 11040218 -17964438 + SSU-rRNA_Dme rRNA rRNA 14 765 -1230 8 669 522 0 0 0 chrUextra 11041013 11041071 -17963585 + (TTTTG)n Simple_repeat Simple_repeat 2 59 0 8 669 3504 25 0 5 chrUextra 11041171 11041616 -17963040 - Invader2_I LTR Gypsy -2277 2315 1873 8 669 2178 32 122 37 chrUextra 11041603 11041924 -17962732 - Invader2_I LTR Gypsy -3373 1219 872 8 669 5292 23 0 0 chrUextra 11042131 11042777 -17961879 + DOC2_DM LINE Jockey 2535 3180 -1613 8 669 2038 185 22 9 chrUextra 11042878 11043630 -17961026 + SAR_DM Satellite Satellite 1 761 -749 8 669 2176 8 0 0 chrUextra 11043730 11043986 -17960670 + DOC LINE Jockey 1764 2019 -2706 8 669 4326 2 0 0 chrUextra 11043980 11044483 -17960173 + DOC LINE Jockey 3124 3626 -1099 8 669 4295 45 9 0 chrUextra 11044583 11045160 -17959496 + IDEFIX_I LTR Gypsy 283 864 -4764 8 669 1215 31 0 0 chrUextra 11045177 11045336 -17959320 + IDEFIX_I LTR Gypsy 2190 2348 -3280 8 669 5505 40 0 24 chrUextra 11045436 11046187 -17958469 + R1_DM LINE R1 321 1053 -4303 8 669 2299 78 13 56 chrUextra 11046289 11046682 -17957974 - Gypsy12_I LTR Gypsy -5170 376 1 8 669 2004 116 28 14 chrUextra 11046682 11047039 -17957617 - Gypsy12A_LTR LTR Gypsy 0 2280 1919 8 669 6155 5 1 1 chrUextra 11047142 11047895 -17956761 + MDG1_I LTR Gypsy 4506 5258 -1338 8 669 6510 4 0 1 chrUextra 11047995 11048748 -17955908 + R2_DM LINE R2 2176 2927 -680 8 669 2982 6 3 0 chrUextra 11048848 11049199 -17955457 + NOMAD_LTR LTR Gypsy 167 518 0 8 669 21 36 0 0 chrUextra 11049199 11049227 -17955429 + AT_rich Low_complexity Low_complexity 1 28 0 8 669 425 20 0 0 chrUextra 11049550 11049601 -17955055 + Baggins1 LINE LOA 5346 5396 -57 8 669 744 71 0 0 chrUextra 11050168 11050267 -17954389 + (GAGAA)n Simple_repeat Simple_repeat 2 100 0 8 669 1557 17 0 0 chrUextra 11050267 11050447 -17954209 + (GAAAA)n Simple_repeat Simple_repeat 1 180 0 8 669 2972 188 23 7 chrUextra 11050567 11051300 -17953356 - SAR_DM Satellite Satellite -396 1076 332 8 669 3319 181 7 8 chrUextra 11051408 11052159 -17952497 + SAR_DM Satellite Satellite 230 979 -493 8 669 5819 11 4 0 chrUextra 11052260 11052849 -17951807 - DM176_I LTR Gypsy -5303 1117 529 8 669 181 30 29 57 chrUextra 11052849 11052884 -17951772 + (TTA)n Simple_repeat Simple_repeat 3 36 0 8 669 5819 11 4 0 chrUextra 11052884 11053013 -17951643 - DM176_I LTR Gypsy -5892 528 397 8 669 1411 12 0 0 chrUextra 11053113 11053282 -17951374 + R1_DM LINE R1 4898 5066 -290 8 669 897 53 0 0 chrUextra 11053279 11053393 -17951263 + R1_DM LINE R1 5243 5356 0 8 669 3159 65 5 5 chrUextra 11053426 11053861 -17950795 + R1_DM LINE R1 1 435 -4921 8 669 718 160 0 4 chrUextra 11054004 11054242 -17950414 - SAR_DM Satellite Satellite -801 237 1 8 669 1936 172 28 17 chrUextra 11054253 11054719 -17949937 - SAR_DM Satellite Satellite -396 1076 606 8 669 21 89 0 0 chrUextra 11055335 11055391 -17949265 + AT_rich Low_complexity Low_complexity 1 56 0 8 669 1345 0 0 12 chrUextra 11055410 11055572 -17949084 - SSU-rRNA_Dme rRNA rRNA 0 1995 1836 8 669 943 200 64 0 chrUextra 11056048 11056298 -17948358 + DNAREP1_DM LINE Penelope 1 266 -328 8 669 1620 4 0 2 chrUextra 11056525 11057278 -17947378 + (ATAAG)n Simple_repeat Simple_repeat 1 751 0 8 669 1055 8 0 0 chrUextra 11057380 11057506 -17947150 - ROO_LTR LTR Pao -302 126 1 8 669 4640 34 0 6 chrUextra 11057506 11058131 -17946525 - ROO_I LTR Pao 0 8256 7636 8 669 3160 183 16 9 chrUextra 11058231 11058981 -17945675 - SAR_DM Satellite Satellite -436 1036 282 8 669 3443 169 16 8 chrUextra 11059085 11059837 -17944819 - SAR_DM Satellite Satellite -464 1008 251 8 669 1522 74 5 31 chrUextra 11060466 11060690 -17943966 - Baggins1 LINE LOA -262 5191 4974 8 669 2310 80 3 6 chrUextra 11060790 11061131 -17943525 - HOBO DNA hAT -2347 669 330 8 669 1973 112 189 17 chrUextra 11061108 11061515 -17943141 - PROTOP DNA P -4003 477 1 8 669 230 94 0 0 chrUextra 11061515 11061543 -17943113 - HOBO DNA hAT -2704 312 285 8 669 2541 101 9 30 chrUextra 11061653 11062396 -17942260 - DMSAT6 Satellite Satellite -64 727 1 8 669 6452 1 0 1 chrUextra 11062496 11063249 -17941407 - R2_DM LINE R2 -2409 1198 447 8 669 6029 29 0 0 chrUextra 11063349 11064102 -17940554 + MDG1_I LTR Gypsy 3223 3975 -2621 8 669 6047 25 3 3 chrUextra 11064202 11064955 -17939701 - R1_DM LINE R1 -303 5053 4301 8 669 6555 1 0 0 chrUextra 11065055 11065808 -17938848 + BS2 LINE Jockey 3687 4439 -282 8 669 5639 45 43 1 chrUextra 11065908 11066660 -17937996 - R1_DM LINE R1 -3928 1428 646 8 669 22 56 0 0 chrUextra 11066810 11066846 -17937810 + AT_rich Low_complexity Low_complexity 1 36 0 8 669 840 9 0 35 chrUextra 11066872 11066985 -17937671 + NTS_DM Other Other 25 133 -107 8 669 1252 18 0 6 chrUextra 11066985 11067150 -17937506 + NTS_DM Other Other 38 201 -39 8 669 870 9 0 27 chrUextra 11067202 11067314 -17937342 + NTS_DM Other Other 25 133 -107 8 669 1252 18 0 6 chrUextra 11067314 11067479 -17937177 + NTS_DM Other Other 38 201 -39 8 669 351 24 0 0 chrUextra 11067614 11067656 -17937000 - LSU-rRNA_Dme rRNA rRNA -1219 2681 2640 8 669 531 0 0 0 chrUextra 11067654 11067715 -17936941 - R1_DM LINE R1 0 5356 5296 8 669 5736 1 0 0 chrUextra 11067712 11068367 -17936289 - LSU-rRNA_Dme rRNA rRNA -1249 2651 1997 8 669 4711 76 74 4 chrUextra 11068467 11069220 -17935436 + IDEFIX_I LTR Gypsy 4038 4843 -785 8 669 6318 17 7 0 chrUextra 11069320 11070073 -17934583 - Gypsy6_I LTR Gypsy -5440 1572 815 8 669 3333 179 7 8 chrUextra 11070173 11070924 -17933732 - SAR_DM Satellite Satellite -493 979 230 8 669 2521 116 39 2 chrUextra 11071026 11071533 -17933123 + TART_B1 LINE telomeric 1880 2405 -8249 8 669 227 32 0 0 chrUextra 11071533 11071564 -17933092 + PROTOP_B DNA P 1 31 -1122 8 669 1554 10 0 69 chrUextra 11071562 11071779 -17932877 + PROTOP_A DNA P 728 929 -176 8 669 2244 18 4 4 chrUextra 11071879 11072156 -17932500 - ACCORD2_I LTR Gypsy -6094 1118 842 8 669 3735 8 40 2 chrUextra 11072154 11072632 -17932024 - ACCORD2_I LTR Gypsy -2904 4308 3813 8 669 632 193 7 14 chrUextra 11072771 11072913 -17931743 - HETRP_DM Satellite Satellite -203 1669 1529 8 669 477 217 8 16 chrUextra 11073046 11073168 -17931488 - HETRP_DM Satellite Satellite -203 1669 1549 8 669 192 40 0 0 chrUextra 11073168 11073193 -17931463 + (TC)n Simple_repeat Simple_repeat 2 26 0 8 669 655 186 7 14 chrUextra 11073324 11073466 -17931190 - HETRP_DM Satellite Satellite -203 1669 1529 8 669 6402 1 0 0 chrUextra 11073585 11074338 -17930318 + STALKER4_I LTR Gypsy 5035 5787 -743 8 669 6568 1 0 0 chrUextra 11074438 11075190 -17929466 + MICROPIA_I LTR Gypsy 2630 3381 -1095 8 669 6199 1 1 0 chrUextra 11075290 11076002 -17928654 + LSU-rRNA_Dme rRNA rRNA 1926 2638 -1262 8 669 356 23 0 0 chrUextra 11075999 11076042 -17928614 + R1_DM LINE R1 4840 4882 -474 8 669 5933 29 12 0 chrUextra 11076144 11076894 -17927762 - MDG1_I LTR Gypsy -756 5840 5082 8 669 6348 13 0 0 chrUextra 11076994 11077746 -17926910 + G_DM LINE Jockey 2754 3505 -841 8 669 2876 207 14 23 chrUextra 11077850 11078598 -17926058 - SAR_DM Satellite Satellite -577 741 1 8 669 5896 15 19 1 chrUextra 11078698 11079450 -17925206 + Invader3_I LTR Gypsy 4071 4835 -53 8 669 6473 1 0 0 chrUextra 11079550 11080302 -17924354 + ACCORD2_I LTR Gypsy 576 1327 -5885 8 669 6421 0 0 0 chrUextra 11080402 11081154 -17923502 - DMRT1B LINE R1 -4230 953 202 8 669 21 57 0 0 chrUextra 11081405 11081440 -17923216 + AT_rich Low_complexity Low_complexity 1 35 0 8 669 1985 8 0 0 chrUextra 11081440 11081680 -17922976 + ALUII_DM Unknown Unknown 1 240 0 8 669 373 56 19 0 chrUextra 11082124 11082178 -17922478 - DNAREP1_DM LINE Penelope -532 62 8 8 669 559 149 15 7 chrUextra 11082250 11082385 -17922271 + PROTOP_B DNA P 313 448 -705 8 669 328 87 0 0 chrUextra 11082424 11082470 -17922186 - DNAREP1_DM LINE Penelope -199 395 350 8 669 396 167 62 0 chrUextra 11082499 11082595 -17922061 - DNAREP1_DM LINE Penelope -317 277 176 8 669 27 0 0 0 chrUextra 11082696 11082723 -17921933 + AT_rich Low_complexity Low_complexity 1 27 0 8 669 410 63 32 0 chrUextra 11082795 11082858 -17921798 + IDEFIX_LTR LTR Gypsy 3 67 -527 8 669 5262 64 23 3 chrUextra 11082973 11083710 -17920946 + R1_DM LINE R1 1 752 -4604 8 669 2490 79 19 18 chrUextra 11083826 11084562 -17920094 - DMSAT6 Satellite Satellite 0 737 1 8 669 6581 1 1 0 chrUextra 11085514 11086266 -17918390 - LSU-rRNA_Dme rRNA rRNA -305 3595 2843 8 669 34 24 0 0 chrUextra 11086687 11086728 -17917928 + AT_rich Low_complexity Low_complexity 1 41 0 8 669 21 95 0 0 chrUextra 11086941 11087004 -17917652 + AT_rich Low_complexity Low_complexity 1 63 0 8 669 890 0 0 0 chrUextra 11087016 11087118 -17917538 + LSU-rRNA_Dme rRNA rRNA 1 102 -3798 8 669 2644 192 57 16 chrUextra 11087218 11087968 -17916688 - SAR_DM Satellite Satellite -267 1205 425 8 669 315 0 0 0 chrUextra 11088071 11088107 -17916549 - NTS_DM Other Other -204 36 1 8 669 1861 0 17 13 chrUextra 11088107 11088346 -17916310 - NTS_DM Other Other 0 240 1 8 669 1252 18 0 6 chrUextra 11088428 11088593 -17916063 - NTS_DM Other Other -39 201 38 8 669 870 9 0 27 chrUextra 11088593 11088705 -17915951 - NTS_DM Other Other -107 133 25 8 669 22 56 0 0 chrUextra 11088731 11088767 -17915889 + AT_rich Low_complexity Low_complexity 1 36 0 8 669 255 125 0 0 chrUextra 11088780 11088820 -17915836 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 669 2967 183 29 17 chrUextra 11088925 11089672 -17914984 + SAR_DM Satellite Satellite 1 755 -396 8 669 4399 43 15 13 chrUextra 11089774 11090459 -17914197 - PROTOP DNA P -464 641 1 8 669 1006 53 118 7 chrUextra 11090626 11090779 -17913877 - PROTOP_A DNA P -935 170 1 8 669 451 153 70 12 chrUextra 11090897 11091038 -17913618 - TAHRE LINE telomeric -3988 10489 10371 8 669 664 260 103 19 chrUextra 11091032 11091295 -17913361 - TAHRE LINE telomeric -372 10091 9807 8 669 366 184 13 0 chrUextra 11091302 11091378 -17913278 - Gypsy12A_LTR LTR Gypsy -18 2262 2186 8 669 6448 1 1 0 chrUextra 11091478 11092230 -17912426 + DM176_I LTR Gypsy 2242 2994 -3426 8 669 6182 23 5 0 chrUextra 11092330 11093082 -17911574 - R1_DM LINE R1 -750 4606 3851 8 669 832 9 9 27 chrUextra 11093224 11093335 -17911321 + NTS_DM Other Other 25 133 -107 8 669 817 0 0 0 chrUextra 11093335 11093431 -17911225 + NTS_DM Other Other 38 133 -107 8 669 1408 20 20 20 chrUextra 11093431 11093634 -17911022 + NTS_DM Other Other 38 240 0 8 669 1734 21 17 17 chrUextra 11093634 11093874 -17910782 + NTS_DM Other Other 1 240 0 8 669 458 33 17 0 chrUextra 11093874 11093934 -17910722 + NTS_DM Other Other 1 61 -179 8 669 2540 195 13 19 chrUextra 11094034 11094786 -17909870 + SAR_DM Satellite Satellite 1 747 -836 8 669 4686 9 6 13 chrUextra 11095738 11096373 -17908283 + STALKER4_I LTR Gypsy 5900 6530 0 8 669 919 8 8 0 chrUextra 11096373 11096490 -17908166 + STALKER4_LTR LTR Gypsy 1 118 -284 8 669 6136 19 0 0 chrUextra 11096606 11097342 -17907314 - R1_DM LINE R1 -2953 2403 1668 8 669 5564 54 1 9 chrUextra 11097442 11098188 -17906468 - BATUMI_I LTR Pao -3888 4075 3336 8 669 2942 160 139 11 chrUextra 11098295 11099045 -17905611 - TART LINE telomeric -4606 9871 9026 8 669 6336 1 0 0 chrUextra 11099149 11099869 -17904787 - SSU-rRNA_Dme rRNA rRNA -1275 720 1 8 669 1727 10 0 0 chrUextra 11099998 11100205 -17904451 - MICROPIA_LTR LTR Gypsy -38 438 232 8 669 1988 4 0 0 chrUextra 11100234 11100466 -17904190 - MICROPIA_LTR LTR Gypsy -244 232 1 8 669 2260 14 0 3 chrUextra 11100466 11100750 -17903906 - MICROPIA_I LTR Gypsy 0 4476 4194 8 669 2945 182 18 19 chrUextra 11100852 11101586 -17903070 + SAR_DM Satellite Satellite 387 1119 -353 8 669 306 210 10 20 chrUextra 11101500 11101602 -17903054 - XDMR_DM Unknown Unknown 0 360 260 8 669 6520 1 0 0 chrUextra 11101702 11102454 -17902202 + DOC LINE Jockey 3844 4595 -130 8 669 6381 4 3 3 chrUextra 11102554 11103306 -17901350 - LSU-rRNA_Dme rRNA rRNA -2248 1652 901 8 669 3060 181 22 30 chrUextra 11103406 11104158 -17900498 - SAR_DM Satellite Satellite -1087 746 1 8 669 729 127 8 0 chrUextra 11104258 11104384 -17900272 - ARS406_DM Unknown Unknown -226 127 1 8 669 3059 181 10 11 chrUextra 11104288 11105009 -17899647 + SAR_DM Satellite Satellite 192 911 -561 8 669 266 347 16 28 chrUextra 11105563 11105854 -17898802 - Gypsy3_I LTR Gypsy -5228 1784 1242 8 669 2929 202 17 27 chrUextra 11105964 11106714 -17897942 - SAR_DM Satellite Satellite -587 742 1 8 669 6425 1 1 0 chrUextra 11106814 11107566 -17897090 - LSU-rRNA_Dme rRNA rRNA -2657 1243 491 8 669 478 286 27 27 chrUextra 11108098 11108396 -17896260 + DM176_I LTR Gypsy 1831 2128 -4292 8 669 365 0 20 20 chrUextra 11108368 11108418 -17896238 - TLD3 Unknown Unknown -3 169 120 8 669 3059 169 13 23 chrUextra 11108518 11109270 -17895386 - SAR_DM Satellite Satellite -353 1119 375 8 669 6191 12 4 1 chrUextra 11109370 11110122 -17894534 - R1_DM LINE R1 -1268 4088 3335 8 669 4055 0 2 2 chrUextra 11110222 11110701 -17893955 + FW_DM LINE Jockey 4210 4688 -4 8 669 2369 0 0 0 chrUextra 11110700 11110974 -17893682 - DOC LINE Jockey -1928 2797 2524 8 669 388 78 0 0 chrUextra 11111074 11111125 -17893531 - HETRP_DM Satellite Satellite -293 1579 1529 8 669 662 200 6 19 chrUextra 11111249 11111407 -17893249 - HETRP_DM Satellite Satellite -188 1684 1529 8 669 491 208 8 16 chrUextra 11111576 11111698 -17892958 - HETRP_DM Satellite Satellite -203 1669 1549 8 669 210 37 0 0 chrUextra 11111698 11111725 -17892931 + (TC)n Simple_repeat Simple_repeat 2 28 0 8 669 4083 2 0 0 chrUextra 11111926 11112390 -17892266 - SSU-rRNA_Dme rRNA rRNA -1531 464 1 8 669 32 0 0 0 chrUextra 11112522 11112554 -17892102 + AT_rich Low_complexity Low_complexity 1 32 0 8 669 21 0 0 0 chrUextra 11113367 11113388 -17891268 + AT_rich Low_complexity Low_complexity 1 21 0 8 669 807 63 0 0 chrUextra 11113419 11113530 -17891126 + Gypsy10_LTR LTR Gypsy 1 111 -253 8 669 914 72 5 16 chrUextra 11113645 11114382 -17890274 + RSP Satellite Satellite 1 729 0 8 669 2772 179 68 12 chrUextra 11114482 11115202 -17889454 + SAR_DM Satellite Satellite 253 1012 -460 8 669 1080 24 24 24 chrUextra 11115334 11115502 -17889154 + NTS_DM Other Other 73 240 0 8 669 1850 4 17 13 chrUextra 11115502 11115741 -17888915 + NTS_DM Other Other 1 240 0 8 669 1861 0 17 13 chrUextra 11115741 11115980 -17888676 + NTS_DM Other Other 1 240 0 8 669 861 0 19 0 chrUextra 11115980 11116086 -17888570 + NTS_DM Other Other 1 108 -132 8 669 5609 47 8 0 chrUextra 11116186 11116938 -17887718 + IDEFIX_I LTR Gypsy 83 840 -4788 8 669 6625 0 0 0 chrUextra 11117038 11117790 -17886866 + HMSBEAGLE_I LTR Gypsy 1156 1907 -4622 8 669 6059 12 3 5 chrUextra 11117890 11118642 -17886014 - STALKER4_I LTR Gypsy -4594 1936 1187 8 669 3179 228 21 29 chrUextra 11118742 11119772 -17884884 + SAR_DM Satellite Satellite 1 1021 -262 8 669 333 213 21 0 chrUextra 11119698 11119792 -17884864 - XDMR_DM Unknown Unknown -8 352 257 8 669 465 205 8 0 chrUextra 11119790 11119907 -17884749 - ARS406_DM Unknown Unknown -235 118 1 8 669 978 198 48 18 chrUextra 11119802 11120302 -17884354 + SAR_DM Satellite Satellite 1 514 -680 8 669 2690 177 10 8 chrUextra 11120446 11121067 -17883589 - SAR_DM Satellite Satellite -558 914 293 8 669 520 142 18 0 chrUextra 11121079 11121192 -17883464 - SAR_DM Satellite Satellite -678 794 680 8 669 4115 32 262 17 chrUextra 11121298 11122000 -17882656 + MDG1_I LTR Gypsy 5723 6596 0 8 669 231 88 0 0 chrUextra 11122016 11122050 -17882606 + (TAA)n Simple_repeat Simple_repeat 3 36 0 8 669 27 29 0 0 chrUextra 11122204 11122238 -17882418 + AT_rich Low_complexity Low_complexity 1 34 0 8 669 752 37 0 115 chrUextra 11122561 11122683 -17881973 + Baggins1 LINE LOA 5346 5453 0 8 669 4858 88 12 4 chrUextra 11123002 11123754 -17880902 - DM297_I LTR Gypsy -3085 3082 2325 8 669 3039 166 47 12 chrUextra 11123860 11124586 -17880070 + SAR_DM Satellite Satellite 326 1076 -396 8 669 252 0 0 0 chrUextra 11125314 11125343 -17879313 - SSU-rRNA_Dme rRNA rRNA 0 1995 1967 8 669 951 0 0 0 chrUextra 11125350 11125458 -17879198 - SSU-rRNA_Dme rRNA rRNA -347 1648 1541 8 669 1401 287 24 14 chrUextra 11125664 11126309 -17878347 + ROVER-I_DM LTR Gypsy 341 1346 -5238 8 669 1013 185 48 9 chrUextra 11126412 11127095 -17877561 + SAR_DM Satellite Satellite 1 709 -680 8 669 6522 1 0 0 chrUextra 11127262 11128014 -17876642 - Invader3_I LTR Gypsy -811 4077 3326 8 669 1132 0 0 0 chrUextra 11128114 11128250 -17876406 - ROVER-LTR_DM LTR Gypsy -231 136 1 8 669 3368 5 7 7 chrUextra 11128256 11128670 -17875986 - DM297_LTR LTR Gypsy 0 414 1 8 669 1592 15 0 0 chrUextra 11128670 11128866 -17875790 - DM297_I LTR Gypsy 0 6167 5972 8 669 1305 233 2 8 chrUextra 11128966 11129273 -17875383 + GTWIN_I LTR Gypsy 6153 6421 0 8 669 639 240 156 46 chrUextra 11129276 11129604 -17875052 + GTWIN_LTR LTR Gypsy 42 405 -90 8 669 5531 47 39 1 chrUextra 11129818 11130570 -17874086 - IDEFIX_I LTR Gypsy -2989 2639 1860 8 669 1491 19 10 5 chrUextra 11130670 11130878 -17873778 - DOC5_DM LINE Jockey -495 4187 3979 8 669 541 137 11 0 chrUextra 11130897 11130992 -17873664 - DMCR1A LINE CR1 -4010 460 365 8 669 558 127 36 0 chrUextra 11130987 11131097 -17873559 - DMCR1A LINE CR1 -4350 120 7 8 669 235 146 0 0 chrUextra 11131164 11131205 -17873451 + DMCR1A LINE CR1 744 784 -3686 8 669 252 208 0 0 chrUextra 11131343 11131396 -17873260 + NOMAD_I LTR Gypsy 6520 6572 0 8 669 4048 96 171 5 chrUextra 11132374 11133126 -17871530 - TART LINE telomeric -3844 10633 9757 8 669 4671 21 3 2 chrUextra 11133226 11133805 -17870851 + R1_DM LINE R1 3670 4249 -1107 8 669 1250 47 58 0 chrUextra 11133800 11133972 -17870684 + R1_DM LINE R1 458 639 -4717 8 669 2263 95 22 39 chrUextra 11134084 11134830 -17869826 + DMSAT6 Satellite Satellite 1 732 -61 8 669 1609 37 5 14 chrUextra 11134930 11135150 -17869506 + IDEFIX_LTR LTR Gypsy 377 594 0 8 669 25 0 0 0 chrUextra 11135341 11135366 -17869290 + AT_rich Low_complexity Low_complexity 1 25 0 8 669 22 56 0 0 chrUextra 11135404 11135440 -17869216 + AT_rich Low_complexity Low_complexity 1 36 0 8 669 1063 44 0 0 chrUextra 11135545 11135682 -17868974 + IDEFIX_I LTR Gypsy 1 137 -5491 8 669 1861 0 17 13 chrUextra 11135815 11136054 -17868602 + NTS_DM Other Other 1 240 0 8 669 1847 0 17 13 chrUextra 11136056 11136294 -17868362 + NTS_DM Other Other 2 240 0 8 669 1766 8 21 17 chrUextra 11136294 11136533 -17868123 + NTS_DM Other Other 1 240 0 8 669 2010 19 15 4 chrUextra 11136637 11137064 -17867592 + MDG3_I LTR Gypsy 4488 4986 0 8 669 2065 30 8 0 chrUextra 11137064 11137329 -17867327 + MDG3_LTR LTR Gypsy 1 267 0 8 669 493 0 0 0 chrUextra 11137328 11137386 -17867270 + MDG3_I LTR Gypsy 1 58 -4928 8 669 4240 113 105 0 chrUextra 11137495 11138221 -17866435 + TART_B1 LINE telomeric 5536 6337 -4317 8 669 6064 32 1 1 chrUextra 11138338 11139090 -17865566 - R1_DM LINE R1 -3377 1979 1228 8 669 2819 54 0 10 chrUextra 11139190 11139580 -17865076 + PROTOP_A DNA P 720 1105 0 8 669 759 126 154 0 chrUextra 11139580 11139723 -17864933 - DNAREP1_DM LINE Penelope -20 574 410 8 669 479 100 0 0 chrUextra 11139717 11139787 -17864869 - DNAREP1_DM LINE Penelope -490 104 35 8 669 1438 15 20 20 chrUextra 11140068 11140271 -17864385 + NTS_DM Other Other 38 240 0 8 669 1731 21 17 17 chrUextra 11140271 11140511 -17864145 + NTS_DM Other Other 1 240 0 8 669 1756 17 17 17 chrUextra 11140511 11140751 -17863905 + NTS_DM Other Other 1 240 0 8 669 358 23 0 0 chrUextra 11140751 11140794 -17863862 + NTS_DM Other Other 1 43 -197 8 83 3928 53 78 66 chrUextra 11140894 11141646 -17863010 - ROO_I LTR Pao -6874 1382 200 8 670 6300 1 3 0 chrUextra 11141746 11142485 -17862171 - R1_DM LINE R1 -1759 3597 2857 8 670 1734 21 17 17 chrUextra 11142622 11142862 -17861794 + NTS_DM Other Other 1 240 0 8 670 1734 21 17 17 chrUextra 11142862 11143102 -17861554 + NTS_DM Other Other 1 240 0 8 670 1828 8 17 13 chrUextra 11143102 11143341 -17861315 + NTS_DM Other Other 1 240 0 8 670 2819 65 7 17 chrUextra 11143624 11144029 -17860627 - Baggins1 LINE LOA -262 5191 4791 8 670 2465 79 38 14 chrUextra 11144302 11145044 -17859612 - DMSAT6 Satellite Satellite -50 759 1 8 670 2302 107 8 39 chrUextra 11145154 11145906 -17858750 + DMSAT6 Satellite Satellite 1 728 -33 8 670 1102 0 14 7 chrUextra 11146008 11146148 -17858508 + LSU-rRNA_Dme rRNA rRNA 1648 1788 -2112 8 670 4939 2 0 0 chrUextra 11146192 11146758 -17857898 + LSU-rRNA_Dme rRNA rRNA 1788 2353 -1547 8 670 6544 1 0 0 chrUextra 11146858 11147610 -17857046 + DMRT1A LINE R1 3200 3951 -1232 8 670 2946 35 0 22 chrUextra 11147710 11148115 -17856541 - TART LINE telomeric -13452 1025 630 8 670 1760 132 11 17 chrUextra 11148114 11148462 -17856194 - TAHRE LINE telomeric -12 10451 10106 8 670 6543 1 0 0 chrUextra 11148562 11149314 -17855342 - MAX_I LTR Pao -4427 3487 2736 8 670 3100 179 10 12 chrUextra 11149415 11150146 -17854510 - SAR_DM Satellite Satellite -549 923 195 8 670 636 125 0 0 chrUextra 11150053 11150165 -17854491 + ARS406_DM Unknown Unknown 1 112 -241 8 670 6512 1 0 3 chrUextra 11150268 11151018 -17853638 + SSU-rRNA_Dme rRNA rRNA 154 901 -1094 8 670 1100 291 7 7 chrUextra 11151441 11151869 -17852787 + Gypsy9_I LTR Gypsy 882 1629 -5383 8 670 28 48 0 0 chrUextra 11152288 11152330 -17852326 + AT_rich Low_complexity Low_complexity 1 42 0 8 670 30 27 0 0 chrUextra 11152684 11152721 -17851935 + AT_rich Low_complexity Low_complexity 1 37 0 8 670 799 30 0 10 chrUextra 11152822 11152922 -17851734 + R1_DM LINE R1 5258 5356 0 8 670 4447 62 24 3 chrUextra 11152957 11153574 -17851082 + R1_DM LINE R1 2 631 -4725 8 670 6366 12 1 0 chrUextra 11153674 11154426 -17850230 - DM1731_I LTR Copia -2545 1431 679 8 670 3161 173 25 13 chrUextra 11154526 11155275 -17849381 + SAR_DM Satellite Satellite 298 1055 -417 8 670 881 54 0 0 chrUextra 11155379 11155491 -17849165 + PROTOP DNA P 4369 4480 0 8 670 26 30 0 0 chrUextra 11155850 11155883 -17848773 + AT_rich Low_complexity Low_complexity 1 33 0 8 670 23 68 0 0 chrUextra 11155929 11155973 -17848683 + AT_rich Low_complexity Low_complexity 1 44 0 8 670 21 89 0 0 chrUextra 11156011 11156067 -17848589 + AT_rich Low_complexity Low_complexity 1 56 0 8 670 5046 2 2 2 chrUextra 11156230 11156813 -17847843 - R2_DM LINE R2 -3023 584 2 8 670 1487 6 0 0 chrUextra 11156810 11156982 -17847674 - LSU-rRNA_Dme rRNA rRNA -1319 2581 2410 8 670 5553 0 2 0 chrUextra 11157082 11157716 -17846940 + SSU-rRNA_Dme rRNA rRNA 1361 1995 0 8 670 4765 13 60 1 chrUextra 11157934 11158686 -17845970 - R1_DM LINE R1 -1319 4037 3242 8 670 684 179 54 0 chrUextra 11158818 11158986 -17845670 - SAR_DM Satellite Satellite -749 723 547 8 670 2168 183 15 15 chrUextra 11159001 11159538 -17845118 - SAR_DM Satellite Satellite -396 1076 540 8 670 6430 1 3 3 chrUextra 11159638 11160390 -17844266 - LSU-rRNA_Dme rRNA rRNA -2249 1651 900 8 670 450 334 39 36 chrUextra 11160491 11160995 -17843661 - GTWIN_I LTR Gypsy -2937 3484 2640 8 670 1504 28 19 0 chrUextra 11160995 11161209 -17843447 - TLD2 Unknown Unknown 0 218 1 8 670 450 334 39 36 chrUextra 11161209 11161235 -17843421 - GTWIN_I LTR Gypsy -2937 2639 2593 8 670 3693 30 100 3 chrUextra 11161342 11161942 -17842714 + R1_DM LINE R1 4699 5356 0 8 670 820 69 9 0 chrUextra 11161975 11162091 -17842565 + R1_DM LINE R1 1 117 -5239 8 670 3528 0 5 0 chrUextra 11162193 11162632 -17842024 + ROO_I LTR Pao 7816 8256 0 8 670 2744 3 0 0 chrUextra 11162632 11162944 -17841712 + ROO_LTR LTR Pao 1 312 -116 8 670 919 32 0 8 chrUextra 11163044 11163171 -17841485 - NTS_DM Other Other -77 163 38 8 670 870 9 0 27 chrUextra 11163171 11163283 -17841373 - NTS_DM Other Other -107 133 25 8 670 1252 18 0 6 chrUextra 11163335 11163500 -17841156 - NTS_DM Other Other -39 201 38 8 670 870 9 0 27 chrUextra 11163500 11163612 -17841044 - NTS_DM Other Other -107 133 25 8 670 22 56 0 0 chrUextra 11163638 11163674 -17840982 + AT_rich Low_complexity Low_complexity 1 36 0 8 670 265 173 0 19 chrUextra 11163687 11163740 -17840916 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2569 8 670 4071 10 2 2 chrUextra 11163895 11164386 -17840270 + R1_DM LINE R1 3397 3887 -1469 8 670 2067 28 0 0 chrUextra 11164389 11164644 -17840012 + R1_DM LINE R1 4143 4397 -959 8 670 6133 8 5 0 chrUextra 11164746 11165497 -17839159 + DM297_I LTR Gypsy 3149 3903 -2264 8 670 1326 71 0 0 chrUextra 11165597 11165779 -17838877 - ROOA_I LTR Pao -2248 4601 4420 8 670 4303 42 29 12 chrUextra 11165769 11166348 -17838308 - ROOA_I LTR Pao -2581 4268 3680 8 670 6386 0 1 1 chrUextra 11166449 11167199 -17837457 + R1_DM LINE R1 2392 3141 -2215 8 670 6500 5 0 0 chrUextra 11167299 11168050 -17836606 + IVK_DM LINE I 3912 4662 -740 8 670 22 56 0 0 chrUextra 11168326 11168362 -17836294 + AT_rich Low_complexity Low_complexity 1 36 0 8 670 3084 28 0 8 chrUextra 11168511 11168901 -17835755 + G2_DM LINE Jockey 1411 1797 -1305 8 670 641 172 68 68 chrUextra 11169853 11170059 -17834597 - DNAREP1_DM LINE Penelope -262 332 83 8 670 489 33 0 0 chrUextra 11170148 11170209 -17834447 - DNAREP1_DM LINE Penelope -532 62 2 8 670 6355 11 0 1 chrUextra 11170703 11171454 -17833202 + BLOOD_I LTR Gypsy 3933 4682 -1931 8 670 6390 0 1 0 chrUextra 11171554 11172305 -17832351 + ROO_I LTR Pao 7314 8065 -191 8 670 246 150 0 0 chrUextra 11172405 11172445 -17832211 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 670 22 56 0 0 chrUextra 11172450 11172486 -17832170 + AT_rich Low_complexity Low_complexity 1 36 0 8 670 5224 2 2 0 chrUextra 11172558 11173156 -17831500 - LSU-rRNA_Dme rRNA rRNA 0 3900 3302 8 670 6482 0 0 0 chrUextra 11173256 11174007 -17830649 + Invader2_I LTR Gypsy 861 1611 -2981 8 670 5196 45 53 33 chrUextra 11174107 11174858 -17829798 - DIVER2_I LTR Pao -2336 1811 1046 8 670 6420 9 0 0 chrUextra 11174958 11175709 -17828947 - Gypsy4_I LTR Gypsy -1573 4715 3965 8 670 363 145 0 80 chrUextra 11175826 11175901 -17828755 - HETRP_DM Satellite Satellite -286 1586 1518 8 670 655 186 7 14 chrUextra 11176018 11176160 -17828496 - HETRP_DM Satellite Satellite -203 1669 1529 8 670 477 217 8 16 chrUextra 11176293 11176415 -17828241 - HETRP_DM Satellite Satellite -203 1669 1549 8 670 192 40 0 0 chrUextra 11176415 11176440 -17828216 + (TC)n Simple_repeat Simple_repeat 2 26 0 8 670 7768 151 38 55 chrUextra 11176660 11178261 -17826395 + R1_DM LINE R1 3139 4712 -644 8 670 6459 1 1 0 chrUextra 11178362 11179113 -17825543 + FW_DM LINE Jockey 2885 3636 -1056 8 670 957 57 0 0 chrUextra 11179298 11179438 -17825218 - G4_DM LINE Jockey 0 3856 3717 8 670 1140 21 0 0 chrUextra 11179436 11179576 -17825080 - G4_DM LINE Jockey -267 3589 3450 8 670 719 281 3 22 chrUextra 11179596 11179964 -17824692 + DM297_I LTR Gypsy 1891 2251 -3916 8 670 6525 0 0 0 chrUextra 11180064 11180815 -17823841 + DOC LINE Jockey 2342 3092 -1633 8 670 1412 307 19 52 chrUextra 11180919 11181645 -17823011 - MICROPIA_I LTR Gypsy -2662 1814 1113 8 670 51 31 0 0 chrUextra 11181874 11181939 -17822717 + AT_rich Low_complexity Low_complexity 1 65 0 8 670 22 35 0 0 chrUextra 11182115 11182144 -17822512 + AT_rich Low_complexity Low_complexity 1 29 0 8 670 224 185 31 0 chrUextra 11182370 11182435 -17822221 + (TAA)n Simple_repeat Simple_repeat 2 68 0 8 670 749 18 35 26 chrUextra 11182617 11182733 -17821923 + NTS_DM Other Other 124 240 0 8 670 1820 4 17 17 chrUextra 11182733 11182973 -17821683 + NTS_DM Other Other 1 240 0 8 670 1778 8 17 17 chrUextra 11182973 11183213 -17821443 + NTS_DM Other Other 1 240 0 8 670 1287 7 0 0 chrUextra 11183213 11183368 -17821288 + NTS_DM Other Other 1 155 -85 8 670 6197 19 15 0 chrUextra 11183468 11184219 -17820437 - R1_DM LINE R1 -2943 2413 1652 8 670 2275 108 7 43 chrUextra 11184319 11185066 -17819590 - DMSAT6 Satellite Satellite -68 719 1 8 670 6461 1 1 3 chrUextra 11185170 11185921 -17818735 + SSU-rRNA_Dme rRNA rRNA 679 1428 -567 8 670 262 250 12 23 chrUextra 11186404 11186490 -17818166 + (CATA)n Simple_repeat Simple_repeat 1 85 0 8 670 25 48 0 46 chrUextra 11187084 11187149 -17817507 + AT_rich Low_complexity Low_complexity 1 62 0 8 670 1994 57 19 0 chrUextra 11187723 11187985 -17816671 + Baggins1 LINE LOA 1595 1861 -3592 8 670 3920 40 0 0 chrUextra 11187980 11188474 -17816182 + Baggins1 LINE LOA 4316 4809 -644 8 670 4491 14 2 0 chrUextra 11188574 11189115 -17815541 - NINJA_I LTR Pao -4805 1206 665 8 670 1821 0 0 0 chrUextra 11189115 11189325 -17815331 - ACCORD_LTR LTR Gypsy 0 558 349 8 670 3200 180 12 8 chrUextra 11190276 11191027 -17813629 + SAR_DM Satellite Satellite 230 983 -489 8 670 22 56 0 0 chrUextra 11191140 11191176 -17813480 + AT_rich Low_complexity Low_complexity 1 36 0 8 670 255 125 0 0 chrUextra 11191189 11191229 -17813427 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 670 246 150 0 0 chrUextra 11191365 11191405 -17813251 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 670 246 150 0 0 chrUextra 11191457 11191497 -17813159 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 670 22 56 0 0 chrUextra 11191502 11191538 -17813118 + AT_rich Low_complexity Low_complexity 1 36 0 8 670 2333 0 0 0 chrUextra 11191610 11191878 -17812778 - LSU-rRNA_Dme rRNA rRNA 0 3900 3633 8 670 6361 12 7 0 chrUextra 11191978 11192729 -17811927 + FW_DM LINE Jockey 3376 4131 -561 8 670 3597 72 30 24 chrUextra 11192829 11193560 -17811096 - PROTOP_A DNA P -65 1088 360 8 670 6171 21 1 0 chrUextra 11193680 11194431 -17810225 - FW_DM LINE Jockey -1732 2960 2209 8 670 1050 0 0 0 chrUextra 11194531 11194651 -17810005 + SSU-rRNA_Dme rRNA rRNA 1876 1995 0 8 670 986 156 27 14 chrUextra 11195390 11195611 -17809045 + SAR_DM Satellite Satellite 680 903 -569 8 670 657 53 53 0 chrUextra 11195526 11195621 -17809035 - ARS406_DM Unknown Unknown -164 189 90 8 670 1691 185 17 7 chrUextra 11195626 11196030 -17808626 + SAR_DM Satellite Satellite 496 903 -569 8 670 634 72 10 0 chrUextra 11196036 11196133 -17808523 - ARS406_DM Unknown Unknown -194 159 62 8 670 5405 0 0 38 chrUextra 11196302 11196984 -17807672 + LSU-rRNA_Dme rRNA rRNA 1 656 -3244 8 670 2866 53 3 0 chrUextra 11197461 11197835 -17806821 + Baggins1 LINE LOA 4791 5165 -288 8 670 802 20 0 10 chrUextra 11197935 11198038 -17806618 + NTS_DM Other Other 32 133 -107 8 670 1438 15 20 20 chrUextra 11198038 11198241 -17806415 + NTS_DM Other Other 38 240 0 8 670 1726 17 17 21 chrUextra 11198241 11198482 -17806174 + NTS_DM Other Other 1 240 0 8 670 1646 10 0 0 chrUextra 11198482 11198684 -17805972 + NTS_DM Other Other 1 202 -38 8 670 5948 5 15 15 chrUextra 11198786 11199537 -17805119 + MDG1_I LTR Gypsy 880 1630 -4966 8 670 6354 8 15 0 chrUextra 11199637 11200388 -17804268 - TAHRE LINE telomeric -61 10402 9641 8 670 6115 29 1 0 chrUextra 11200488 11201239 -17803417 + DMRT1B LINE R1 2949 3700 -1483 8 670 3205 178 19 9 chrUextra 11201339 11202088 -17802568 - SAR_DM Satellite Satellite -439 1033 278 8 670 826 62 13 65 chrUextra 11202190 11202344 -17802312 - Copia2_I LTR Copia -112 4050 3905 8 670 5020 16 12 0 chrUextra 11202336 11202941 -17801715 - Copia2_I LTR Copia -1572 2590 1979 8 670 21 89 0 0 chrUextra 11203088 11203144 -17801512 + AT_rich Low_complexity Low_complexity 1 56 0 8 670 5428 0 2 3 chrUextra 11203163 11203792 -17800864 - SSU-rRNA_Dme rRNA rRNA 0 1995 1368 8 670 6456 1 1 3 chrUextra 11203892 11204643 -17800013 - SSU-rRNA_Dme rRNA rRNA -427 1568 819 8 670 2278 4 0 0 chrUextra 11205594 11205857 -17798799 - SSU-rRNA_Dme rRNA rRNA -1732 263 1 8 670 32 0 0 0 chrUextra 11205989 11206021 -17798635 + AT_rich Low_complexity Low_complexity 1 32 0 8 670 2927 170 11 14 chrUextra 11206445 11207196 -17797460 - SAR_DM Satellite Satellite -259 1213 195 8 670 5909 28 0 12 chrUextra 11207296 11208047 -17796609 + FW_DM LINE Jockey 1046 1787 -2905 8 670 688 188 87 12 chrUextra 11208147 11208319 -17796337 - HETA LINE telomeric -1866 4215 4031 8 670 22 56 0 0 chrUextra 11208473 11208509 -17796147 + AT_rich Low_complexity Low_complexity 1 36 0 8 670 322 178 50 101 chrUextra 11208554 11208673 -17795983 + Copia_I LTR Copia 4401 4513 -80 8 670 6423 7 1 4 chrUextra 11208998 11209749 -17794907 - MICROPIA_I LTR Gypsy -721 3755 3007 8 670 6501 0 0 0 chrUextra 11209852 11210600 -17794056 + BARI_DM DNA Tc1 143 890 -838 8 670 6528 5 1 0 chrUextra 11210700 11211451 -17793205 + MICROPIA_I LTR Gypsy 1913 2664 -1812 8 670 2552 25 0 0 chrUextra 11211551 11211876 -17792780 + Invader2_I LTR Gypsy 2391 2715 -1877 8 670 3547 2 0 0 chrUextra 11211876 11212302 -17792354 - DOC LINE Jockey 0 4725 4300 8 670 5097 27 80 0 chrUextra 11212405 11213153 -17791503 + R1_DM LINE R1 4222 5029 -327 8 670 1016 146 22 0 chrUextra 11214108 11214320 -17790336 + DNAREP1_DM LINE Penelope 123 332 -262 8 670 795 103 145 6 chrUextra 11214328 11214494 -17790162 - PROTOP DNA P -566 3914 3726 8 670 1809 60 147 7 chrUextra 11214532 11214832 -17789824 - PROTOP DNA P -1006 3474 3133 8 670 3248 0 0 0 chrUextra 11214955 11215325 -17789331 + LSU-rRNA_Dme rRNA rRNA 3531 3900 0 8 670 22 56 0 0 chrUextra 11215397 11215433 -17789223 + AT_rich Low_complexity Low_complexity 1 36 0 8 670 246 150 0 0 chrUextra 11215531 11215571 -17789085 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 670 246 150 0 0 chrUextra 11215623 11215663 -17788993 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 670 2470 81 19 18 chrUextra 11216659 11217408 -17787248 + DMSAT6 Satellite Satellite 1 750 -80 8 670 6186 7 0 0 chrUextra 11218359 11219110 -17785546 + DM297_I LTR Gypsy 1327 2077 -4090 8 670 761 100 8 8 chrUextra 11219210 11219341 -17785315 - ARS406_DM Unknown Unknown -222 131 1 8 670 2919 180 10 13 chrUextra 11219244 11219958 -17784698 + SAR_DM Satellite Satellite 192 903 -569 8 670 6102 19 0 0 chrUextra 11220061 11220812 -17783844 + STALKER4_I LTR Gypsy 3166 3916 -2614 8 670 6026 1 0 33 chrUextra 11220912 11221663 -17782993 - LSU-rRNA_Dme rRNA rRNA -3096 804 79 8 670 5517 60 40 37 chrUextra 11221763 11222514 -17782142 + CIRCE LINE Composite 118 870 -5486 8 670 1679 0 0 21 chrUextra 11222614 11222803 -17781853 - ACCORD2_LTR LTR Gypsy -30 185 1 8 670 332 58 0 161 chrUextra 11222803 11222865 -17781791 - Invader1_LTR LTR Gypsy -371 52 1 8 670 2748 101 59 5 chrUextra 11222865 11223291 -17781365 - Invader1_I LTR Gypsy 0 3186 2738 8 670 23 54 0 0 chrUextra 11223328 11223365 -17781291 + AT_rich Low_complexity Low_complexity 1 37 0 8 670 6786 3 0 0 chrUextra 11223469 11224216 -17780440 - DM176_I LTR Gypsy -2006 4414 3668 8 670 577 208 0 0 chrUextra 11224319 11224444 -17780212 - ROVER-I_DM LTR Gypsy -470 6114 5990 8 670 3273 161 36 5 chrUextra 11224479 11225064 -17779592 - ROVER-I_DM LTR Gypsy -1276 5308 4706 8 670 411 39 0 19 chrUextra 11225168 11225220 -17779436 + ARS406_DM Unknown Unknown 139 189 -164 8 670 3169 188 19 25 chrUextra 11225176 11225918 -17778738 - SAR_DM Satellite Satellite -614 737 1 8 670 62 26 0 0 chrUextra 11226045 11226121 -17778535 + AT_rich Low_complexity Low_complexity 1 76 0 8 670 298 178 439 8 chrUextra 11226267 11226397 -17778259 - PROTOP DNA P -4295 185 1 8 670 236 139 0 0 chrUextra 11226425 11226468 -17778188 + DM176_I LTR Gypsy 4724 4766 -1654 8 670 1031 121 19 0 chrUextra 11226475 11226632 -17778024 + DNAREP1_DM LINE Penelope 6 165 -429 8 670 375 161 123 0 chrUextra 11226688 11226769 -17777887 + DNAREP1_DM LINE Penelope 120 210 -384 8 670 3220 200 11 8 chrUextra 11226869 11227606 -17777050 - SAR_DM Satellite Satellite -495 977 239 8 670 362 83 33 0 chrUextra 11227560 11227620 -17777036 + ARS406_DM Unknown Unknown 1 62 -291 8 670 34 24 0 0 chrUextra 11227788 11227829 -17776827 + AT_rich Low_complexity Low_complexity 1 41 0 8 670 21 95 0 0 chrUextra 11228042 11228105 -17776551 + AT_rich Low_complexity Low_complexity 1 63 0 8 670 2858 0 3 71 chrUextra 11228117 11228471 -17776185 + LSU-rRNA_Dme rRNA rRNA 1 330 -3570 8 670 4438 2 0 0 chrUextra 11228571 11229048 -17775608 + LSU-rRNA_Dme rRNA rRNA 2161 2637 -1263 8 670 2458 18 0 14 chrUextra 11229034 11229322 -17775334 + R1_DM LINE R1 4813 5096 -260 8 670 3817 2 0 2 chrUextra 11229422 11229839 -17774817 - LSU-rRNA_Dme rRNA rRNA -845 3055 2640 8 670 3123 0 0 0 chrUextra 11229837 11230173 -17774483 - R1_DM LINE R1 0 5356 5021 8 670 6914 1 0 0 chrUextra 11230273 11231024 -17773632 - R1_DM LINE R1 -2836 2520 1770 8 670 277 253 90 50 chrUextra 11231442 11231542 -17773114 - DNAREP1_DM LINE Penelope -2 592 489 8 670 21 0 0 0 chrUextra 11231615 11231636 -17773020 + AT_rich Low_complexity Low_complexity 1 21 0 8 670 206 200 0 44 chrUextra 11231738 11231806 -17772850 + (TA)n Simple_repeat Simple_repeat 1 65 0 8 670 6638 7 5 3 chrUextra 11231975 11232726 -17771930 - R1_DM LINE R1 -942 4414 3662 8 670 2328 283 9 9 chrUextra 11232918 11233577 -17771079 + Gypsy_I LTR Gypsy 2375 3033 -3474 8 670 2665 84 12 17 chrUextra 11234528 11235279 -17769377 - DMSAT6 Satellite Satellite -66 746 1 8 670 5529 100 0 0 chrUextra 11235380 11236130 -17768526 + HETA LINE telomeric 2179 2928 -3153 8 670 21 95 0 0 chrUextra 11236419 11236482 -17768174 + AT_rich Low_complexity Low_complexity 1 63 0 8 670 4041 2 0 53 chrUextra 11236494 11236981 -17767675 + LSU-rRNA_Dme rRNA rRNA 1 461 -3439 8 670 6577 27 1 0 chrUextra 11237081 11237832 -17766824 - DMCR1A LINE CR1 -1702 2768 2017 8 670 235 213 0 0 chrUextra 11238025 11238072 -17766584 + (CAAAG)n Simple_repeat Simple_repeat 3 49 0 8 670 6835 1 1 0 chrUextra 11238784 11239534 -17765122 - R1_DM LINE R1 -3287 2069 1319 8 670 27 49 0 0 chrUextra 11239694 11239735 -17764921 + AT_rich Low_complexity Low_complexity 1 41 0 8 670 2017 179 209 38 chrUextra 11239746 11240384 -17764272 - TART LINE telomeric -3986 10491 9745 8 670 2565 103 12 21 chrUextra 11240485 11241236 -17763420 - DMSAT6 Satellite Satellite -81 743 1 8 670 3625 176 9 8 chrUextra 11241338 11242073 -17762583 - SAR_DM Satellite Satellite -411 1061 326 8 670 810 0 0 0 chrUextra 11242187 11242277 -17762379 + (CACAA)n Simple_repeat Simple_repeat 4 93 0 8 670 5262 8 6 8 chrUextra 11242317 11242938 -17761718 + DMRT1B LINE R1 403 1022 -4161 8 670 1117 293 44 33 chrUextra 11243038 11243699 -17760957 - BLOOD_I LTR Gypsy -4174 2439 1772 8 670 5446 80 11 0 chrUextra 11243889 11244640 -17760016 + TART LINE telomeric 410 1168 -13309 8 670 4078 0 5 0 chrUextra 11245591 11246035 -17758621 - R1_DM LINE R1 -4910 446 1 8 670 2877 0 0 0 chrUextra 11246035 11246342 -17758314 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2326 8 670 6647 19 1 0 chrUextra 11246442 11247193 -17757463 + FW_DM LINE Jockey 3723 4474 -218 8 670 813 10 10 10 chrUextra 11247293 11247393 -17757263 + LSU-rRNA_Dme rRNA rRNA 1692 1791 -2109 8 670 5639 2 0 2 chrUextra 11247434 11248044 -17756612 + LSU-rRNA_Dme rRNA rRNA 1788 2396 -1504 8 670 388 0 19 19 chrUextra 11248144 11248197 -17756459 - R2_DM LINE R2 -3552 55 3 8 670 693 71 41 0 chrUextra 11248177 11248275 -17756381 - R2B_DM LINE R2 -3426 102 1 8 670 6356 14 0 0 chrUextra 11248195 11248895 -17755761 - LSU-rRNA_Dme rRNA rRNA -1319 2581 1882 8 670 2121 166 30 25 chrUextra 11248995 11249741 -17754915 - SAR_DM Satellite Satellite -684 749 1 8 670 208 200 31 0 chrUextra 11250122 11250187 -17754469 + (TTA)n Simple_repeat Simple_repeat 2 68 0 8 670 21 36 0 0 chrUextra 11250510 11250538 -17754118 + AT_rich Low_complexity Low_complexity 1 28 0 8 670 208 200 31 0 chrUextra 11251144 11251209 -17753447 + (TTA)n Simple_repeat Simple_repeat 2 68 0 8 670 930 108 0 28 chrUextra 11251545 11251743 -17752913 + TART LINE telomeric 7598 7839 -6638 8 670 722 83 46 0 chrUextra 11251746 11251855 -17752801 + TART LINE telomeric 10224 10337 -4140 8 670 1915 64 0 47 chrUextra 11251851 11252130 -17752526 + TAHRE LINE telomeric 10186 10451 -12 8 670 880 174 31 0 chrUextra 11252129 11252290 -17752366 + TAHRE LINE telomeric 7044 7209 -3254 8 670 6388 28 7 3 chrUextra 11252395 11253145 -17751511 - MDG1_I LTR Gypsy -4256 2340 1588 8 670 2048 21 0 4 chrUextra 11253245 11253479 -17751177 + R1_DM LINE R1 5122 5354 -2 8 670 3584 81 4 4 chrUextra 11253514 11253995 -17750661 + R1_DM LINE R1 1 481 -4875 8 670 6959 1 1 0 chrUextra 11254097 11254845 -17749811 - LSU-rRNA_Dme rRNA rRNA -1324 2576 1828 8 670 3011 220 0 8 chrUextra 11254945 11255572 -17749084 - ROVER-I_DM LTR Gypsy -3756 2828 2207 8 670 4190 2 0 0 chrUextra 11255795 11256244 -17748412 + TABOR_LTR LTR Gypsy 58 506 0 8 670 2757 0 0 0 chrUextra 11256244 11256545 -17748111 + DMRT1B LINE R1 4825 5125 -58 8 670 1598 0 0 0 chrUextra 11256645 11256815 -17747841 + LSU-rRNA_Dme rRNA rRNA 3731 3900 0 8 670 268 196 0 19 chrUextra 11256916 11256968 -17747688 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 670 268 196 0 19 chrUextra 11257008 11257060 -17747596 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 670 268 196 0 19 chrUextra 11257100 11257152 -17747504 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 670 278 176 0 19 chrUextra 11257183 11257235 -17747421 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 670 22 56 0 0 chrUextra 11257248 11257284 -17747372 + AT_rich Low_complexity Low_complexity 1 36 0 8 670 705 12 0 35 chrUextra 11257310 11257395 -17747261 + NTS_DM Other Other 25 106 -134 8 670 6487 4 0 0 chrUextra 11257522 11258245 -17746411 + IDEFIX_I LTR Gypsy 1 723 -4905 8 670 21 89 0 0 chrUextra 11258388 11258444 -17746212 + AT_rich Low_complexity Low_complexity 1 56 0 8 670 5861 2 2 0 chrUextra 11258463 11259093 -17745563 - SSU-rRNA_Dme rRNA rRNA 0 1995 1365 8 670 21 89 0 0 chrUextra 11259337 11259393 -17745263 + AT_rich Low_complexity Low_complexity 1 56 0 8 670 26 30 0 0 chrUextra 11259521 11259554 -17745102 + AT_rich Low_complexity Low_complexity 1 33 0 8 670 6462 29 0 0 chrUextra 11260045 11260795 -17743861 - R1_DM LINE R1 -1669 3687 2938 8 670 586 53 0 13 chrUextra 11260895 11260971 -17743685 - R1_DM LINE R1 -3011 2345 2271 8 670 442 20 0 0 chrUextra 11260964 11261014 -17743642 + CIRCE LINE Composite 4931 4980 -1376 8 670 2091 45 7 11 chrUextra 11261372 11261645 -17743011 + CIRCE LINE Composite 4981 5252 -1104 8 670 342 350 38 6 chrUextra 11261745 11261903 -17742753 + GA-rich Low_complexity Low_complexity 1 163 0 8 670 6584 3 4 5 chrUextra 11262608 11263345 -17741311 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1056 8 670 1894 172 30 8 chrUextra 11263459 11264195 -17740461 - SAR_DM Satellite Satellite -796 752 1 8 670 6685 0 0 5 chrUextra 11264295 11265045 -17739611 - R1_DM LINE R1 -1933 3423 2678 8 670 6418 1 0 33 chrUextra 11265145 11265895 -17738761 + LSU-rRNA_Dme rRNA rRNA 173 897 -3003 8 670 3409 40 40 0 chrUextra 11266325 11266745 -17737911 + PROTOP DNA P 1 437 -4043 8 670 465 50 0 0 chrUextra 11266845 11266905 -17737751 + (TATTG)n Simple_repeat Simple_repeat 1 60 0 8 670 1936 43 3 97 chrUextra 11266905 11267212 -17737444 - BATUMI_I LTR Pao -684 7279 7002 8 670 3363 0 5 5 chrUextra 11267212 11267595 -17737061 - BATUMI_I LTR Pao 0 7963 7581 8 670 3888 62 96 28 chrUextra 11267695 11268260 -17736396 - CIRCE LINE Composite -3551 2805 2203 8 670 1281 44 75 0 chrUextra 11268286 11268445 -17736211 - CIRCE LINE Composite -4471 1885 1715 8 670 6536 27 9 0 chrUextra 11268545 11269295 -17735361 - LSU-rRNA_Dme rRNA rRNA -73 3827 3071 8 670 3622 176 11 8 chrUextra 11269396 11270142 -17734514 - SAR_DM Satellite Satellite -432 1040 293 8 670 1414 167 359 8 chrUextra 11270477 11270967 -17733689 + MAX_I LTR Pao 557 1218 -6696 8 670 6899 8 0 0 chrUextra 11271097 11271845 -17732811 - Invader4_I LTR Gypsy -1369 1044 297 8 670 295 138 35 0 chrUextra 11271945 11272003 -17732653 - ARS406_DM Unknown Unknown -293 60 1 8 83 3404 185 18 8 chrUextra 11271965 11272694 -17731962 + SAR_DM Satellite Satellite 247 982 -490 8 671 6509 25 21 0 chrUextra 11272795 11273545 -17731111 - IDEFIX_I LTR Gypsy -3541 2087 1322 8 671 6349 28 27 1 chrUextra 11273645 11274395 -17730261 - FW_DM LINE Jockey -3721 971 203 8 671 6399 28 3 3 chrUextra 11274495 11275245 -17729411 - R1_DM LINE R1 -186 5170 4421 8 671 2040 186 15 13 chrUextra 11275345 11276093 -17728563 - SAR_DM Satellite Satellite -838 748 1 8 671 6677 12 19 0 chrUextra 11276195 11276945 -17727711 + FW_DM LINE Jockey 633 1396 -3296 8 671 454 55 0 0 chrUextra 11277045 11277100 -17727556 + DM176_LTR LTR Gypsy 453 507 0 8 671 4479 32 18 27 chrUextra 11277100 11277795 -17726861 + DM176_I LTR Gypsy 1 632 -5788 8 671 3132 190 25 25 chrUextra 11277895 11278645 -17726011 - SAR_DM Satellite Satellite -305 1167 418 8 671 4197 111 6 1 chrUextra 11278745 11279488 -17725168 + Gypsy2_I LTR Gypsy 3647 5111 -1901 8 671 5205 3 0 2 chrUextra 11279595 11280183 -17724473 - STALKER4_I LTR Gypsy -3079 3451 2865 8 671 1383 6 0 0 chrUextra 11280188 11280345 -17724311 - STALKER4_I LTR Gypsy -3795 2735 2579 8 671 1150 7 14 7 chrUextra 11280445 11280585 -17724071 + LSU-rRNA_Dme rRNA rRNA 1651 1791 -2109 8 671 5261 2 0 2 chrUextra 11280626 11281195 -17723461 + LSU-rRNA_Dme rRNA rRNA 1788 2355 -1545 8 671 3756 176 8 8 chrUextra 11281295 11282045 -17722611 + SAR_DM Satellite Satellite 284 1033 -439 8 671 324 25 25 0 chrUextra 11282145 11282185 -17722471 + ARS406_DM Unknown Unknown 149 189 -164 8 671 3234 188 18 25 chrUextra 11282153 11282895 -17721761 - SAR_DM Satellite Satellite -625 736 1 8 671 4379 30 270 8 chrUextra 11282995 11283666 -17720990 + MDG1_I LTR Gypsy 5750 6596 0 8 671 391 67 0 39 chrUextra 11283666 11283744 -17720912 + MDG1_LTR LTR Gypsy 1 75 -367 8 671 6675 16 1 1 chrUextra 11283845 11284595 -17720061 - DMCR1A LINE CR1 -1042 3428 2679 8 671 3836 26 0 0 chrUextra 11285545 11285998 -17718658 + Invader2_I LTR Gypsy 1978 2430 -2162 8 671 2661 7 0 0 chrUextra 11285996 11286293 -17718363 + Invader2_I LTR Gypsy 2710 3006 -1586 8 671 2133 8 0 0 chrUextra 11286395 11286631 -17718025 - G_DM LINE Jockey -228 4118 3883 8 671 4617 10 0 0 chrUextra 11286629 11287145 -17717511 - G_DM LINE Jockey -712 3634 3119 8 671 3475 180 8 11 chrUextra 11287246 11287991 -17716665 + SAR_DM Satellite Satellite 195 937 -535 8 671 4154 15 17 0 chrUextra 11288095 11288568 -17716088 - DOC LINE Jockey -4241 484 4 8 671 23 33 0 0 chrUextra 11288593 11288623 -17716033 + AT_rich Low_complexity Low_complexity 1 30 0 8 671 2993 23 0 0 chrUextra 11288945 11289292 -17715364 + FW_DM LINE Jockey 4345 4691 -1 8 671 895 138 66 32 chrUextra 11289312 11289624 -17715032 + HETA LINE telomeric 5965 6076 -5 8 671 21 36 0 0 chrUextra 11289667 11289695 -17714961 + AT_rich Low_complexity Low_complexity 1 28 0 8 671 7007 0 1 0 chrUextra 11290645 11291395 -17713261 - Gypsy2_I LTR Gypsy -1265 4870 4120 8 671 6720 11 3 1 chrUextra 11291495 11292245 -17712411 + DOC2_DM LINE Jockey 1930 2680 -2113 8 671 6370 28 12 0 chrUextra 11292345 11293095 -17711561 - R1_DM LINE R1 -2033 3323 2565 8 671 6851 3 1 0 chrUextra 11293195 11293945 -17710711 + ROO_I LTR Pao 6677 7427 -829 8 671 1483 213 52 37 chrUextra 11294897 11295639 -17709017 + SAR_DM Satellite Satellite 1 753 -749 8 671 976 0 0 9 chrUextra 11295745 11295853 -17708803 + LSU-rRNA_Dme rRNA rRNA 3794 3900 0 8 671 268 196 0 19 chrUextra 11295954 11296006 -17708650 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 671 268 196 0 19 chrUextra 11296046 11296098 -17708558 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 671 268 196 0 19 chrUextra 11296138 11296190 -17708466 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 671 278 176 0 19 chrUextra 11296221 11296273 -17708383 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 8 671 22 56 0 0 chrUextra 11296286 11296322 -17708334 + AT_rich Low_complexity Low_complexity 1 36 0 8 671 936 9 0 27 chrUextra 11296348 11296460 -17708196 + NTS_DM Other Other 25 133 -107 8 671 330 0 0 0 chrUextra 11296460 11296495 -17708161 + NTS_DM Other Other 38 72 -168 8 671 6510 24 1 0 chrUextra 11296595 11297345 -17707311 + R1_DM LINE R1 2181 2931 -2425 8 671 480 154 0 0 chrUextra 11297445 11297568 -17707088 + (CA)n Simple_repeat Simple_repeat 2 124 0 8 671 5561 11 0 0 chrUextra 11297571 11298195 -17706461 + DMRT1B LINE R1 1108 1731 -3452 8 671 6678 15 0 0 chrUextra 11298295 11299045 -17705611 + STALKER4_I LTR Gypsy 3341 4090 -2440 8 671 21 89 0 0 chrUextra 11299337 11299393 -17705263 + AT_rich Low_complexity Low_complexity 1 56 0 8 671 23 68 0 0 chrUextra 11299431 11299475 -17705181 + AT_rich Low_complexity Low_complexity 1 44 0 8 671 26 30 0 0 chrUextra 11299521 11299554 -17705102 + AT_rich Low_complexity Low_complexity 1 33 0 8 671 1888 32 0 14 chrUextra 11299995 11300217 -17704439 - DIVER2_LTR LTR Pao -166 219 1 8 671 3512 40 9 0 chrUextra 11300217 11300642 -17704014 - DIVER2_I LTR Pao 0 4147 3719 8 671 705 29 0 182 chrUextra 11300619 11300745 -17703911 - DIVER2_I LTR Pao -2572 1575 1473 8 671 6567 3 0 0 chrUextra 11300845 11301547 -17703109 - SSU-rRNA_Dme rRNA rRNA -1293 702 1 8 671 3481 168 19 28 chrUextra 11301697 11302444 -17702212 - SAR_DM Satellite Satellite -308 1164 425 8 671 6794 5 3 3 chrUextra 11302545 11303295 -17701361 - LSU-rRNA_Dme rRNA rRNA -2261 1639 890 8 671 3773 28 0 31 chrUextra 11304327 11304778 -17699878 - Baggins1 LINE LOA 0 5453 5017 8 671 1824 28 9 0 chrUextra 11304782 11304995 -17699661 - Baggins1 LINE LOA -97 5356 5142 8 671 7000 0 1 0 chrUextra 11305095 11305845 -17698811 - R2_DM LINE R2 -1348 2259 1509 8 671 382 17 0 133 chrUextra 11306560 11306695 -17697961 + T-rich Low_complexity Low_complexity 2 118 0 8 671 6467 23 1 0 chrUextra 11306795 11307545 -17697111 - G2_DM LINE Jockey -514 2588 1838 8 671 21 89 0 0 chrUextra 11308146 11308202 -17696454 + AT_rich Low_complexity Low_complexity 1 56 0 8 671 29 47 0 0 chrUextra 11308240 11308283 -17696373 + AT_rich Low_complexity Low_complexity 1 43 0 8 671 27 81 0 0 chrUextra 11308329 11308391 -17696265 + AT_rich Low_complexity Low_complexity 1 62 0 8 671 6911 1 1 1 chrUextra 11308495 11309245 -17695411 + R2_DM LINE R2 41 790 -2817 8 671 3424 67 55 0 chrUextra 11309345 11309796 -17694860 - TART LINE telomeric -12717 1760 1285 8 671 1986 108 62 0 chrUextra 11309772 11310095 -17694561 - TART_B1 LINE telomeric -4902 5752 5410 8 671 5135 99 60 1 chrUextra 11310195 11310945 -17693711 + Invader1_I LTR Gypsy 1893 2686 -500 8 671 1579 311 59 20 chrUextra 11311050 11311792 -17692864 + Invader6_I LTR Gypsy 1828 2598 -1501 8 671 21 57 0 0 chrUextra 11311912 11311947 -17692709 + AT_rich Low_complexity Low_complexity 1 35 0 8 671 1350 18 0 6 chrUextra 11311947 11312112 -17692544 - NTS_DM Other Other -39 201 38 8 671 936 9 0 27 chrUextra 11312112 11312224 -17692432 - NTS_DM Other Other -107 133 25 8 671 1350 18 0 6 chrUextra 11312276 11312441 -17692215 - NTS_DM Other Other -39 201 38 8 671 936 9 0 27 chrUextra 11312441 11312553 -17692103 - NTS_DM Other Other -107 133 25 8 671 331 25 0 0 chrUextra 11312605 11312645 -17692011 - NTS_DM Other Other -39 201 162 8 671 3208 184 31 28 chrUextra 11313599 11314344 -17690312 + SAR_DM Satellite Satellite 465 1211 -261 8 671 995 35 0 0 chrUextra 11314466 11314580 -17690076 - R1_DM LINE R1 0 5356 5243 8 671 5374 23 3 0 chrUextra 11314577 11315195 -17689461 - R1_DM LINE R1 -290 5066 4447 8 671 2728 16 5 17 chrUextra 11316145 11316895 -17687761 - HETRP_DM Satellite Satellite -1259 741 1 8 671 288 0 0 0 chrUextra 11317005 11317039 -17687617 - PROTOP_B DNA P -1119 34 1 8 671 3586 186 20 25 chrUextra 11318695 11319440 -17685216 - SAR_DM Satellite Satellite -1078 741 1 8 671 5369 66 3 15 chrUextra 11319551 11320295 -17684361 - BATUMI_I LTR Pao -5170 2744 1979 8 671 6647 21 1 0 chrUextra 11320395 11321145 -17683511 + STALKER4_I LTR Gypsy 3995 4745 -1785 8 671 3602 179 7 8 chrUextra 11321246 11321988 -17682668 + SAR_DM Satellite Satellite 218 958 -514 8 671 2561 116 7 36 chrUextra 11322095 11322845 -17681811 + DMSAT6 Satellite Satellite 1 728 -3 8 671 2771 184 11 5 chrUextra 11322945 11323669 -17680987 - SAR_DM Satellite Satellite -728 727 1 8 671 574 138 45 9 chrUextra 11323583 11323693 -17680963 + ARS406_DM Unknown Unknown 1 114 -239 8 671 6440 29 0 1 chrUextra 11324645 11325395 -17679261 + R1_DM LINE R1 2866 3614 -1742 8 671 6936 0 0 0 chrUextra 11325495 11326245 -17678411 + Copia_I LTR Copia 35 784 -3809 8 671 6516 17 1 3 chrUextra 11326345 11327095 -17677561 + R1_DM LINE R1 3689 4437 -919 8 671 3858 0 2 0 chrUextra 11327196 11327616 -17677040 - DM1731_I LTR Copia -3555 421 1 8 671 2728 34 34 0 chrUextra 11327616 11327941 -17676715 - DM1731_LTR LTR Copia 0 336 1 8 671 1401 6 0 18 chrUextra 11328120 11328285 -17676371 - NTS_DM Other Other -78 162 1 8 671 2006 0 17 13 chrUextra 11328285 11328524 -17676132 - NTS_DM Other Other 0 240 1 8 671 2006 0 17 13 chrUextra 11328524 11328763 -17675893 - NTS_DM Other Other 0 240 1 8 671 6854 1 1 0 chrUextra 11328895 11329645 -17675011 + FW_DM LINE Jockey 874 1624 -3068 8 671 28 48 0 0 chrUextra 11330016 11330058 -17674598 + AT_rich Low_complexity Low_complexity 1 42 0 8 671 532 129 24 0 chrUextra 11330331 11330416 -17674240 - NTS_DM Other Other -150 90 4 8 671 6404 27 24 0 chrUextra 11330595 11331345 -17673311 - FW_DM LINE Jockey -1032 3660 2893 8 671 6792 1 1 1 chrUextra 11331445 11332195 -17672461 + DOC LINE Jockey 1330 2079 -2646 8 671 4264 0 0 2 chrUextra 11332295 11332753 -17671903 + LSU-rRNA_Dme rRNA rRNA 2230 2686 -1214 8 671 2523 7 3 0 chrUextra 11332750 11333045 -17671611 + R1_DM LINE R1 852 1147 -4209 8 671 250 33 0 0 chrUextra 11333233 11333263 -17671393 + Baggins1 LINE LOA 4727 4756 -697 8 671 664 73 324 0 chrUextra 11333271 11333407 -17671249 - FB4_DM DNA Tc1 -3907 182 3 8 671 2922 182 19 24 chrUextra 11333997 11334745 -17669911 - SAR_DM Satellite Satellite -281 1191 448 8 671 3338 169 12 9 chrUextra 11334848 11335595 -17669061 + SAR_DM Satellite Satellite 282 1030 -442 8 671 1680 0 0 0 chrUextra 11335695 11335913 -17668743 + HMSBEAGLE_I LTR Gypsy 570 787 -5742 8 671 677 33 49 16 chrUextra 11335928 11336050 -17668606 + (TTA)n Simple_repeat Simple_repeat 3 128 0 8 671 3373 0 0 0 chrUextra 11336050 11336445 -17668211 + HMSBEAGLE_I LTR Gypsy 976 1370 -5159 8 671 5031 33 13 0 chrUextra 11336545 11337182 -17667474 + IDEFIX_I LTR Gypsy 1562 2206 -3422 8 671 840 20 0 0 chrUextra 11337195 11337295 -17667361 - HMSBEAGLE_I LTR Gypsy -4422 2107 2008 8 671 26 30 0 0 chrUextra 11337412 11337445 -17667211 + AT_rich Low_complexity Low_complexity 1 33 0 8 671 2542 32 3 0 chrUextra 11337821 11338137 -17666519 - PROTOP DNA P 0 4480 4164 8 671 6286 17 1 0 chrUextra 11338245 11338995 -17665661 - DMRT1A LINE R1 -2491 2692 1942 8 671 365 284 147 5 chrUextra 11339095 11339293 -17665363 + Gypsy7_I LTR Gypsy 1442 1667 -3317 8 671 1314 29 6 39 chrUextra 11339319 11339501 -17665155 - G5A_DM LINE Jockey -3 2838 2663 8 671 329 305 0 0 chrUextra 11339502 11339630 -17665026 + Gypsy7_I LTR Gypsy 1239 1366 -3618 8 671 2720 0 0 0 chrUextra 11339945 11340253 -17664403 + ROO_LTR LTR Pao 121 428 0 8 671 3108 14 15 26 chrUextra 11340253 11340695 -17663961 + ROO_I LTR Pao 1 531 -7725 8 671 6005 15 1 0 chrUextra 11340795 11341545 -17663111 - Invader2_I LTR Gypsy -1082 3510 2760 8 671 2924 195 15 20 chrUextra 11342495 11343245 -17661411 + SAR_DM Satellite Satellite 1 746 -208 8 671 2166 220 39 26 chrUextra 11343401 11344093 -17660563 - TAHRE LINE telomeric -374 10089 9389 8 671 3876 7 0 0 chrUextra 11344195 11344647 -17660009 + DMRT1B LINE R1 3256 3707 -1476 8 671 1620 0 0 0 chrUextra 11344647 11344930 -17659726 + (CACAA)n Simple_repeat Simple_repeat 1 283 0 8 671 5950 9 19 0 chrUextra 11345045 11345795 -17658861 + ROO_I LTR Pao 318 1081 -7175 8 671 2856 181 16 25 chrUextra 11345895 11346643 -17658013 + SAR_DM Satellite Satellite 1 740 -261 8 671 6020 31 1 1 chrUextra 11346745 11347495 -17657161 - MDG1_I LTR Gypsy -2232 4364 3615 8 671 1148 24 0 116 chrUextra 11347595 11347784 -17656872 - CIRCE LINE Composite -4885 1471 1305 8 671 543 335 22 22 chrUextra 11347627 11347938 -17656718 - Gypsy12_I LTR Gypsy -2177 3369 3059 8 671 2261 62 0 75 chrUextra 11347850 11348196 -17656460 - CIRCE LINE Composite -5064 1292 973 8 671 6413 3 0 4 chrUextra 11348445 11349195 -17655461 + G2_DM LINE Jockey 769 1515 -1587 8 671 3181 182 17 8 chrUextra 11349295 11350041 -17654615 - SAR_DM Satellite Satellite -453 1019 267 8 671 1640 319 15 16 chrUextra 11350147 11350892 -17653764 - MICROPIA_I LTR Gypsy -1583 2893 2150 8 671 1966 162 26 3 chrUextra 11351006 11351396 -17653260 - TART LINE telomeric -5127 9350 8952 8 671 2987 178 27 54 chrUextra 11351843 11352590 -17652066 + SAR_DM Satellite Satellite 1 726 -208 8 671 2794 122 119 8 chrUextra 11352728 11353440 -17651216 - TART LINE telomeric -6799 7678 7096 8 671 6184 11 1 0 chrUextra 11354390 11355139 -17649517 - STALKER4_I LTR Gypsy -4493 2037 1288 8 671 2776 191 18 22 chrUextra 11355242 11355981 -17648675 - SAR_DM Satellite Satellite -300 1172 437 8 671 6094 20 8 5 chrUextra 11356088 11356837 -17647819 + FW_DM LINE Jockey 3498 4248 -444 8 671 21 95 0 0 chrUextra 11356966 11357029 -17647627 + AT_rich Low_complexity Low_complexity 1 63 0 8 671 34 24 0 0 chrUextra 11357242 11357283 -17647373 + AT_rich Low_complexity Low_complexity 1 41 0 8 671 47 0 0 0 chrUextra 11358225 11358272 -17646384 + AT_rich Low_complexity Low_complexity 1 47 0 8 671 30 69 0 0 chrUextra 11358322 11358380 -17646276 + AT_rich Low_complexity Low_complexity 1 58 0 8 671 6423 3 0 1 chrUextra 11358635 11359384 -17645272 + R1_DM LINE R1 3063 3810 -1546 8 671 779 72 24 8 chrUextra 11360548 11360674 -17643982 - STALKER4_I LTR Gypsy -5645 885 758 8 671 977 171 94 79 chrUextra 11360740 11361082 -17643574 - ROVER-LTR_DM LTR Gypsy 0 367 21 8 671 28 48 0 0 chrUextra 11361391 11361433 -17643223 + AT_rich Low_complexity Low_complexity 1 42 0 8 671 32 0 0 0 chrUextra 11361762 11361794 -17642862 + AT_rich Low_complexity Low_complexity 1 32 0 8 671 1514 38 0 0 chrUextra 11362031 11362217 -17642439 + PROTOP DNA P 4295 4480 0 8 671 26 30 0 0 chrUextra 11362567 11362600 -17642056 + AT_rich Low_complexity Low_complexity 1 33 0 8 671 1644 9 18 18 chrUextra 11363729 11363954 -17640702 + NTS_DM Other Other 16 240 0 8 671 1756 17 17 17 chrUextra 11363954 11364194 -17640462 + NTS_DM Other Other 1 240 0 8 671 1683 34 17 13 chrUextra 11364194 11364433 -17640223 + NTS_DM Other Other 1 240 0 8 671 376 22 0 0 chrUextra 11364433 11364478 -17640178 + NTS_DM Other Other 1 45 -195 8 671 3703 200 0 4 chrUextra 11364578 11365326 -17639330 - ROVER-I_DM LTR Gypsy -3231 3353 2609 8 671 244 128 0 21 chrUextra 11365779 11365827 -17638829 - HMSBEAGLE_I LTR Gypsy -6308 221 175 8 671 244 128 0 21 chrUextra 11366053 11366101 -17638555 - HMSBEAGLE_I LTR Gypsy -6308 221 175 8 671 6124 7 9 0 chrUextra 11366276 11367025 -17637631 + STALKER4_I LTR Gypsy 4904 5659 -871 8 671 2411 0 3 0 chrUextra 11367125 11367416 -17637240 - ROVER-I_DM LTR Gypsy -985 5599 5308 8 671 3109 17 5 0 chrUextra 11367465 11367874 -17636782 - ROVER-I_DM LTR Gypsy -1253 5331 4921 8 671 6532 1 3 0 chrUextra 11367974 11368723 -17635933 - R2_DM LINE R2 -1652 1955 1205 8 671 733 99 0 22 chrUextra 11368823 11368957 -17635699 - ARS406_DM Unknown Unknown -222 131 1 8 671 2927 174 14 16 chrUextra 11368862 11369572 -17635084 + SAR_DM Satellite Satellite 195 903 -569 8 671 6182 24 1 0 chrUextra 11369672 11370421 -17634235 - R1_DM LINE R1 -201 5155 4406 8 671 2973 3 0 0 chrUextra 11370521 11370864 -17633792 - LSU-rRNA_Dme rRNA rRNA -918 2982 2640 8 671 3511 2 0 0 chrUextra 11370866 11371270 -17633386 - R1_DM LINE R1 0 5356 4953 8 671 6506 4 0 0 chrUextra 11371370 11372119 -17632537 + LINEJ1_DM LINE Jockey 4024 4772 -248 8 671 4944 101 17 5 chrUextra 11372219 11372968 -17631688 - R1_DM LINE R1 -3854 1502 745 8 671 3138 170 11 13 chrUextra 11373108 11373817 -17630839 - SAR_DM Satellite Satellite -396 1076 369 8 671 4913 72 13 30 chrUextra 11373920 11374666 -17629990 - CIRCE LINE Composite -2431 3925 3192 8 671 3070 184 26 9 chrUextra 11374770 11375515 -17629141 + SAR_DM Satellite Satellite 1 758 -396 8 671 943 8 0 24 chrUextra 11375615 11375740 -17628916 + NTS_DM Other Other 41 162 -78 8 671 488 119 36 0 chrUextra 11375850 11375934 -17628722 + NTS_DM Other Other 4 90 -150 8 671 28 48 0 0 chrUextra 11376207 11376249 -17628407 + AT_rich Low_complexity Low_complexity 1 42 0 8 671 34 24 0 0 chrUextra 11376994 11377035 -17627621 + AT_rich Low_complexity Low_complexity 1 41 0 8 671 1645 325 9 15 chrUextra 11377313 11378056 -17626600 - MICROPIA_I LTR Gypsy -656 3820 3082 8 671 3336 174 12 13 chrUextra 11378164 11378911 -17625745 + SAR_DM Satellite Satellite 246 991 -481 8 671 6333 3 29 0 chrUextra 11379011 11379760 -17624896 - STALKER4_I LTR Gypsy -2142 4388 3618 8 671 6076 20 0 0 chrUextra 11379860 11380609 -17624047 + FW_DM LINE Jockey 2710 3458 -1234 8 671 4998 20 53 19 chrUextra 11380709 11381355 -17623301 - CIRCE LINE Composite -3265 3091 2424 8 671 894 10 0 0 chrUextra 11381355 11381458 -17623198 - PROTOP_A DNA P 0 1105 1003 8 671 946 78 6 19 chrUextra 11381610 11382291 -17622365 - RSP Satellite Satellite 0 672 1 8 671 714 286 119 10 chrUextra 11382408 11382796 -17621860 + Gypsy7_I LTR Gypsy 1238 1667 -3317 8 671 2485 43 6 21 chrUextra 11382823 11383156 -17621500 - G5A_DM LINE Jockey -3 2838 2511 8 671 2107 111 21 40 chrUextra 11383256 11383782 -17620874 + QUASIMODO_LTR LTR Gypsy 64 643 -15 8 671 5619 1 3 65 chrUextra 11384959 11385703 -17618953 + LSU-rRNA_Dme rRNA rRNA 1517 2214 -1686 8 671 6286 7 0 0 chrUextra 11386652 11387401 -17617255 + STALKER4_I LTR Gypsy 5373 6121 -409 8 671 34 24 0 0 chrUextra 11387588 11387629 -17617027 + AT_rich Low_complexity Low_complexity 1 41 0 8 671 21 95 0 0 chrUextra 11387842 11387905 -17616751 + AT_rich Low_complexity Low_complexity 1 63 0 8 671 2493 3 0 75 chrUextra 11387917 11388250 -17616406 + LSU-rRNA_Dme rRNA rRNA 1 308 -3592 8 671 1567 47 25 41 chrUextra 11388373 11388618 -17616038 - BATUMI_LTR LTR Pao 0 272 32 8 671 3141 73 0 5 chrUextra 11388642 11389080 -17615576 - BATUMI_I LTR Pao -14 7949 7514 8 671 3633 0 0 56 chrUextra 11390048 11390516 -17614140 - LSU-rRNA_Dme rRNA rRNA -3458 442 1 8 671 21 95 0 0 chrUextra 11390528 11390591 -17614065 + AT_rich Low_complexity Low_complexity 1 63 0 8 671 5361 19 0 0 chrUextra 11390897 11391535 -17613121 - R1_DM LINE R1 -693 4663 4026 8 671 759 20 20 10 chrUextra 11391545 11391646 -17613010 - R1_DM LINE R1 -1690 3666 3565 8 671 276 77 0 0 chrUextra 11392844 11392883 -17611773 + (TA)n Simple_repeat Simple_repeat 1 39 0 8 671 2401 203 82 28 chrUextra 11393448 11394193 -17610463 + Gypsy12_LTR LTR Gypsy 1395 2179 -157 8 671 4654 0 0 43 chrUextra 11394293 11394880 -17609776 - LSU-rRNA_Dme rRNA rRNA -3338 562 1 8 671 21 95 0 0 chrUextra 11394892 11394955 -17609701 + AT_rich Low_complexity Low_complexity 1 63 0 8 671 3149 179 12 21 chrUextra 11395143 11395891 -17608765 - SAR_DM Satellite Satellite -428 1044 304 8 671 3015 169 23 19 chrUextra 11396002 11396734 -17607922 + SAR_DM Satellite Satellite 321 1055 -417 8 671 6175 15 1 0 chrUextra 11396840 11397589 -17607067 + ROO_I LTR Pao 5672 6421 -1835 8 671 407 69 0 0 chrUextra 11398220 11398278 -17606378 - DNAREP1_DM LINE Penelope -9 585 528 8 671 622 143 0 50 chrUextra 11398278 11398418 -17606238 - DNAREP1_DM LINE Penelope -263 331 199 8 671 5032 55 1 49 chrUextra 11398538 11399287 -17605369 - BATUMI_I LTR Pao -4867 3096 2384 8 671 653 0 0 23 chrUextra 11399387 11399474 -17605182 + BATUMI_I LTR Pao 7879 7963 0 8 671 2148 28 0 30 chrUextra 11399474 11399767 -17604889 + BATUMI_I LTR Pao 7002 7285 -678 8 671 2696 24 3 3 chrUextra 11399766 11400136 -17604520 - ACCORD2_I LTR Gypsy -235 6977 6608 8 671 5864 9 36 1 chrUextra 11400236 11400985 -17603671 + DM176_I LTR Gypsy 847 1621 -4799 8 671 6277 12 3 1 chrUextra 11401934 11402683 -17601973 - Gypsy4_I LTR Gypsy -3164 3124 2375 8 671 655 111 0 0 chrUextra 11402784 11402892 -17601764 - ARS406_DM Unknown Unknown -245 108 1 8 83 3185 178 7 11 chrUextra 11402799 11403531 -17601125 + SAR_DM Satellite Satellite 195 923 -549 8 672 5607 33 83 1 chrUextra 11403632 11404381 -17600275 + IDEFIX_I LTR Gypsy 1442 2251 -3377 8 672 4856 9 0 0 chrUextra 11404481 11405048 -17599608 - DMRT1B LINE R1 -1402 3781 3215 8 672 1560 11 0 0 chrUextra 11405049 11405227 -17599429 + (TTGTG)n Simple_repeat Simple_repeat 1 178 0 8 672 294 297 104 86 chrUextra 11405535 11405815 -17598841 - Invader1_LTR LTR Gypsy -55 368 84 8 672 256 151 0 36 chrUextra 11406024 11406079 -17598577 + DMLTR5 LTR Gypsy 44 96 -170 8 672 3644 7 2 2 chrUextra 11406179 11406617 -17598039 + IDEFIX_LTR LTR Gypsy 157 594 0 8 672 491 107 0 0 chrUextra 11406622 11406697 -17597959 + ROVER-LTR_DM LTR Gypsy 73 147 -220 8 672 297 192 25 13 chrUextra 11406783 11406862 -17597794 + ROVER-I_DM LTR Gypsy 1 80 -6504 8 672 2851 35 5 5 chrUextra 11407053 11407421 -17597235 + PROTOP_A DNA P 737 1104 -1 8 672 2834 28 0 0 chrUextra 11407422 11407777 -17596879 - DOC3_DM LINE Jockey -1670 3070 2716 8 672 244 128 0 21 chrUextra 11408083 11408131 -17596525 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 8 672 351 85 661 14 chrUextra 11409105 11409237 -17595419 - HMSBEAGLE_I LTR Gypsy -6308 221 1 8 672 742 185 0 7 chrUextra 11409236 11409383 -17595273 - DMLTR5 LTR Gypsy 0 266 121 8 672 1302 56 0 0 chrUextra 11409575 11409755 -17594901 + (ACATG)n Simple_repeat Simple_repeat 1 180 0 8 672 1620 3 2 2 chrUextra 11409755 11410324 -17594332 + (AGATG)n Simple_repeat Simple_repeat 1 569 0 8 672 4141 71 23 0 chrUextra 11410424 11411000 -17593656 + MICROPIA_I LTR Gypsy 2215 2803 -1673 8 672 1181 102 0 6 chrUextra 11410996 11411173 -17593483 + MICROPIA_I LTR Gypsy 3356 3531 -945 8 672 3377 93 2 2 chrUextra 11411273 11411790 -17592866 + S_DM DNA Tc1 1220 1736 0 8 672 994 61 0 0 chrUextra 11413001 11413133 -17591523 - HETA LINE telomeric -4584 1497 1366 8 672 2586 92 5 38 chrUextra 11413132 11413551 -17591105 - HETA LINE telomeric -106 5975 5571 8 672 1112 84 6 12 chrUextra 11413552 11413720 -17590936 - TART LINE telomeric -4500 9977 9811 8 672 1144 129 10 19 chrUextra 11413821 11414027 -17590629 + Gypsy12A_LTR LTR Gypsy 2059 2262 -18 8 672 664 208 218 23 chrUextra 11414034 11414432 -17590224 + TAHRE LINE telomeric 9807 10489 -3988 8 672 591 108 153 0 chrUextra 11415307 11415418 -17589238 - DNAREP1_DM LINE Penelope 0 594 467 8 672 6326 16 0 0 chrUextra 11415518 11416267 -17588389 - DM1731_I LTR Copia -328 3648 2900 8 672 1602 25 0 3 chrUextra 11416387 11417013 -17587643 + (TTATA)n Simple_repeat Simple_repeat 1 623 0 8 672 211 200 29 58 chrUextra 11417028 11417097 -17587559 + (CCTAT)n Simple_repeat Simple_repeat 3 69 0 8 672 5066 53 1 49 chrUextra 11417216 11417965 -17586691 + BATUMI_I LTR Pao 2298 3010 -4953 8 672 925 94 0 0 chrUextra 11418067 11418216 -17586440 + ARS406_DM Unknown Unknown 10 158 -195 8 672 2731 164 10 5 chrUextra 11418223 11418798 -17585858 - SAR_DM Satellite Satellite -569 903 326 8 672 4044 144 4 5 chrUextra 11418914 11419654 -17585002 - TART_B1 LINE telomeric -9069 1585 847 8 672 2777 197 11 18 chrUextra 11419763 11420512 -17584144 + SAR_DM Satellite Satellite 1 744 -281 8 672 477 0 0 0 chrUextra 11421304 11421357 -17583299 + (GAGAA)n Simple_repeat Simple_repeat 2 54 0 8 672 1730 150 2 5 chrUextra 11422310 11422716 -17581940 + SAR_DM Satellite Satellite 1 404 -987 8 672 1486 187 3 3 chrUextra 11422731 11423059 -17581597 + SAR_DM Satellite Satellite 496 823 -649 8 672 2369 31 0 0 chrUextra 11423161 11423449 -17581207 + R1_DM LINE R1 5069 5356 0 8 672 3083 66 5 5 chrUextra 11423482 11423908 -17580748 + R1_DM LINE R1 1 426 -4930 8 672 204 40 0 0 chrUextra 11424490 11424515 -17580141 + (TA)n Simple_repeat Simple_repeat 1 25 0 8 672 259 185 12 36 chrUextra 11424583 11424667 -17579989 + T-rich Low_complexity Low_complexity 3 84 0 8 672 3074 32 2 5 chrUextra 11424857 11425262 -17579394 + CIRCE LINE Composite 4577 4980 -1376 8 672 1164 53 0 0 chrUextra 11425454 11425606 -17579050 - R1_DM LINE R1 -4037 1319 1168 8 672 6432 0 1 4 chrUextra 11426555 11427304 -17577352 + SSU-rRNA_Dme rRNA rRNA 903 1649 -346 8 672 4147 48 24 70 chrUextra 11427404 11428145 -17576511 + BATUMI_I LTR Pao 60 766 -7197 8 672 6575 1 0 0 chrUextra 11428253 11429002 -17575654 - SSU-rRNA_Dme rRNA rRNA -992 1003 255 8 672 239 236 28 0 chrUextra 11429102 11429174 -17575482 + Gypsy12A_LTR LTR Gypsy 310 383 -1953 8 672 270 232 0 0 chrUextra 11429238 11429294 -17575362 + Gypsy12A_LTR LTR Gypsy 409 464 -1816 8 672 1083 263 22 72 chrUextra 11429306 11429851 -17574805 + Gypsy12_LTR LTR Gypsy 524 1041 -1295 8 672 6541 0 1 1 chrUextra 11429951 11430700 -17573956 - LSU-rRNA_Dme rRNA rRNA -6 3894 3146 8 672 1833 201 109 42 chrUextra 11430803 11431547 -17573109 - HETA LINE telomeric -358 5723 5062 8 672 6449 5 0 0 chrUextra 11431650 11432398 -17572258 + R1_DM LINE R1 4239 4986 -370 8 672 6334 7 1 1 chrUextra 11432498 11433247 -17571409 - R1_DM LINE R1 -1489 3867 3119 8 672 2196 8 19 7 chrUextra 11434196 11434465 -17570191 + QUASIMODO_LTR LTR Gypsy 387 658 0 8 672 3713 38 6 2 chrUextra 11434465 11434944 -17569712 + QUASIMODO_I LTR Gypsy 1 481 -5579 8 672 2495 20 10 0 chrUextra 11435044 11435347 -17569309 + PROTOP_A DNA P 800 1105 0 8 672 243 299 59 70 chrUextra 11436397 11436584 -17568072 - Invader1_LTR LTR Gypsy -55 368 184 8 672 394 0 0 0 chrUextra 11436740 11436785 -17567871 - NTS_DM Other Other -158 82 38 8 672 870 9 0 27 chrUextra 11436785 11436897 -17567759 - NTS_DM Other Other -107 133 25 8 672 1252 18 0 6 chrUextra 11436949 11437114 -17567542 - NTS_DM Other Other -39 201 38 8 672 870 9 0 27 chrUextra 11437114 11437226 -17567430 - NTS_DM Other Other -107 133 25 8 672 1252 18 0 6 chrUextra 11437278 11437443 -17567213 - NTS_DM Other Other -39 201 38 8 672 336 0 0 0 chrUextra 11437443 11437488 -17567168 - NTS_DM Other Other -107 133 89 8 672 324 273 116 83 chrUextra 11437937 11438213 -17566443 - Invader1_LTR LTR Gypsy -55 368 84 8 672 6277 11 8 0 chrUextra 11438436 11439184 -17565472 + Copia2_I LTR Copia 773 1526 -2636 8 672 673 111 8 0 chrUextra 11439284 11439401 -17565255 - ARS406_DM Unknown Unknown -235 118 1 8 672 3109 180 10 11 chrUextra 11439309 11440032 -17564624 + SAR_DM Satellite Satellite 195 916 -556 8 672 3026 172 19 27 chrUextra 11440138 11440880 -17563776 - SAR_DM Satellite Satellite -308 1164 429 8 672 1497 22 0 0 chrUextra 11440980 11441159 -17563497 - R1_DM LINE R1 -3500 1856 1678 8 672 1502 40 62 13 chrUextra 11441156 11441383 -17563273 - R1_DM LINE R1 -4389 967 730 8 672 2728 53 0 6 chrUextra 11441365 11441726 -17562930 - R1_DM LINE R1 -4741 615 257 8 672 3329 101 112 36 chrUextra 11441962 11442576 -17562080 - Gypsy12_I LTR Gypsy -4442 1104 444 8 672 1584 82 77 12 chrUextra 11442676 11442924 -17561732 + Gypsy12_I LTR Gypsy 5283 5546 0 8 672 1628 187 23 26 chrUextra 11442941 11443326 -17561330 + Gypsy12_LTR LTR Gypsy 15 398 -1938 8 672 424 81 42 95 chrUextra 11443323 11443418 -17561238 + Gypsy12_I LTR Gypsy 47 136 -5410 8 672 3666 129 28 38 chrUextra 11443552 11444271 -17560385 - TART LINE telomeric -4301 10176 9465 8 672 3141 194 19 21 chrUextra 11444374 11445118 -17559538 - SAR_DM Satellite Satellite -577 742 1 8 672 3967 11 86 1 chrUextra 11445220 11445968 -17558688 - DOC2_DM LINE Jockey -587 4206 3396 8 672 4394 116 2 3 chrUextra 11446068 11446816 -17557840 + BATUMI_I LTR Pao 3795 4617 -3297 8 672 1944 0 5 5 chrUextra 11446929 11447151 -17557505 - LSU-rRNA_Dme rRNA rRNA -3678 222 1 8 672 21 95 0 0 chrUextra 11447163 11447226 -17557430 + AT_rich Low_complexity Low_complexity 1 63 0 8 672 34 24 0 0 chrUextra 11447439 11447480 -17557176 + AT_rich Low_complexity Low_complexity 1 41 0 8 672 180 239 0 0 chrUextra 11447870 11448033 -17556623 + (TTTG)n Simple_repeat Simple_repeat 4 166 0 8 672 687 156 0 0 chrUextra 11448042 11448221 -17556435 + (TG)n Simple_repeat Simple_repeat 2 180 0 8 672 2615 0 0 0 chrUextra 11448227 11448512 -17556144 - DMRT1B LINE R1 0 5183 4899 8 672 2877 171 17 15 chrUextra 11448613 11449358 -17555298 + SAR_DM Satellite Satellite 1 746 -378 8 672 1695 38 0 0 chrUextra 11449460 11449695 -17554961 - QUASIMODO_I LTR Gypsy -335 5725 5491 8 672 3560 52 44 10 chrUextra 11449704 11450208 -17554448 - QUASIMODO_I LTR Gypsy -885 5175 4655 8 672 594 181 214 45 chrUextra 11450308 11450528 -17554128 - STALKER4_I LTR Gypsy -5389 1141 885 8 672 821 72 24 8 chrUextra 11450874 11451000 -17553656 - STALKER4_I LTR Gypsy -5645 885 758 8 672 2481 7 0 0 chrUextra 11451156 11451434 -17553222 - R1_DM LINE R1 -1053 4303 4026 8 672 3887 36 6 0 chrUextra 11451436 11451904 -17552752 - R1_DM LINE R1 -1679 3677 3207 8 672 1890 18 5 0 chrUextra 11452004 11452223 -17552433 + DOC2_DM LINE Jockey 2289 2508 -2285 8 672 4656 19 0 0 chrUextra 11452221 11452752 -17551904 + DOC2_DM LINE Jockey 3436 3966 -827 8 672 2550 91 20 11 chrUextra 11452852 11453595 -17551061 + DMSAT6 Satellite Satellite 1 750 -57 8 672 3248 179 39 12 chrUextra 11453700 11454448 -17550208 + SAR_DM Satellite Satellite 256 1023 -449 8 672 600 84 0 0 chrUextra 11454548 11454631 -17550025 - G2_DM LINE Jockey -769 2333 2251 8 672 4769 42 51 7 chrUextra 11454631 11455235 -17549421 - G2_DM LINE Jockey -1061 2041 1411 8 672 3104 192 11 12 chrUextra 11455397 11456144 -17548512 + SAR_DM Satellite Satellite 212 957 -515 8 672 3257 193 15 21 chrUextra 11456244 11456988 -17547668 + SAR_DM Satellite Satellite 1 739 -216 8 672 369 258 118 100 chrUextra 11457107 11457387 -17547269 + Invader1_LTR LTR Gypsy 84 368 -55 8 672 6531 19 4 0 chrUextra 11457940 11458688 -17545968 + Copia2_I LTR Copia 1858 2608 -1554 8 672 3027 3 0 0 chrUextra 11458788 11459126 -17545530 - Stalker2_LTR LTR Gypsy -86 338 1 8 672 2794 23 12 27 chrUextra 11459126 11459536 -17545120 - Stalker2_I LTR Gypsy 0 7402 6999 8 672 1512 0 0 0 chrUextra 11460216 11460384 -17544272 + (TTCTC)n Simple_repeat Simple_repeat 4 171 0 8 672 6005 0 1 50 chrUextra 11460484 11461232 -17543424 - Invader3_I LTR Gypsy -2458 2430 1719 8 672 6547 12 1 0 chrUextra 11461332 11462080 -17542576 + IVK_DM LINE I 1615 2363 -3039 8 672 6619 15 0 0 chrUextra 11462180 11462926 -17541730 + BATUMI_I LTR Pao 4781 5526 -2437 8 672 261 234 26 26 chrUextra 11463569 11463683 -17540973 + (CTAAA)n Simple_repeat Simple_repeat 3 116 0 8 672 6859 3 0 0 chrUextra 11463876 11464624 -17540032 + R2_DM LINE R2 1217 1964 -1643 8 672 1992 190 181 46 chrUextra 11464724 11465398 -17539258 + TART LINE telomeric 9727 10491 -3986 8 672 34 24 0 0 chrUextra 11465409 11465450 -17539206 + AT_rich Low_complexity Low_complexity 1 41 0 8 672 3136 191 15 23 chrUextra 11465572 11466320 -17538336 + SAR_DM Satellite Satellite 1 741 -203 8 672 3396 155 39 8 chrUextra 11466421 11467135 -17537521 + SAR_DM Satellite Satellite 376 1111 -361 8 672 232 103 0 0 chrUextra 11467125 11467164 -17537492 - XDMR Unknown Unknown -16 345 307 8 672 6587 1 0 0 chrUextra 11467268 11468016 -17536640 - ROO_I LTR Pao -4510 3746 2999 8 672 6720 3 0 0 chrUextra 11468116 11468864 -17535792 - FW_DM LINE Jockey -3153 1539 792 8 672 262 150 0 0 chrUextra 11469007 11469047 -17535609 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 672 262 150 0 0 chrUextra 11469099 11469139 -17535517 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 672 244 150 0 0 chrUextra 11469182 11469222 -17535434 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 672 22 56 0 0 chrUextra 11469235 11469271 -17535385 + AT_rich Low_complexity Low_complexity 1 36 0 8 672 907 9 0 27 chrUextra 11469297 11469409 -17535247 + NTS_DM Other Other 25 133 -107 8 672 1304 18 0 6 chrUextra 11469409 11469574 -17535082 + NTS_DM Other Other 38 201 -39 8 672 696 12 0 35 chrUextra 11469626 11469712 -17534944 + NTS_DM Other Other 25 107 -133 8 672 663 26 0 0 chrUextra 11469812 11469888 -17534768 - Baggins1 LINE LOA -63 5390 5315 8 672 1793 33 124 0 chrUextra 11469884 11470125 -17534531 - Baggins1 LINE LOA -456 4997 4727 8 672 27 29 0 0 chrUextra 11470328 11470362 -17534294 + AT_rich Low_complexity Low_complexity 1 34 0 8 672 3042 14 25 6 chrUextra 11470660 11471023 -17533633 - PROTOP DNA P -4110 370 1 8 672 2965 37 5 5 chrUextra 11471023 11471408 -17533248 - Gypsy12_LTR LTR Gypsy -304 2032 1648 8 672 2767 164 16 8 chrUextra 11471513 11472256 -17532400 - SAR_DM Satellite Satellite -569 748 1 8 672 435 19 0 0 chrUextra 11472356 11472408 -17532248 + Gypsy12_I LTR Gypsy 5495 5546 0 8 672 6361 3 0 0 chrUextra 11472408 11473104 -17531552 + Gypsy12_LTR LTR Gypsy 1 696 -1640 8 672 6779 4 0 0 chrUextra 11473204 11473952 -17530704 - R1_DM LINE R1 -381 4975 4228 8 672 304 161 18 18 chrUextra 11474053 11474110 -17530546 + HETRP_DM Satellite Satellite 1619 1675 -197 8 672 238 208 0 19 chrUextra 11474162 11474216 -17530440 + HETRP_DM Satellite Satellite 1580 1632 -240 8 672 307 185 250 42 chrUextra 11474263 11474359 -17530297 + HETRP_DM Satellite Satellite 1519 1634 -238 8 672 838 171 12 19 chrUextra 11474407 11474568 -17530088 + HETRP_DM Satellite Satellite 1516 1675 -197 8 672 228 159 0 83 chrUextra 11474722 11474770 -17529886 + HETRP_DM Satellite Satellite 1519 1562 -310 8 672 710 47 0 0 chrUextra 11474900 11474986 -17529670 + Gypsy6A_LTR LTR Gypsy 335 420 0 8 672 863 63 16 16 chrUextra 11474992 11475121 -17529535 + PROTOP DNA P 3346 3474 -1006 8 672 843 103 145 6 chrUextra 11475159 11475325 -17529331 + PROTOP DNA P 3726 3914 -566 8 672 1081 146 26 2 chrUextra 11475333 11475642 -17529014 - DNAREP1_DM LINE Penelope -262 332 123 8 672 6213 0 0 35 chrUextra 11475748 11476496 -17528160 - LSU-rRNA_Dme rRNA rRNA -3062 838 117 8 672 21 89 0 0 chrUextra 11476700 11476756 -17527900 + AT_rich Low_complexity Low_complexity 1 56 0 8 672 5195 2 2 0 chrUextra 11476775 11477344 -17527312 - SSU-rRNA_Dme rRNA rRNA 0 1995 1426 8 672 6030 48 8 3 chrUextra 11477444 11478192 -17526464 + DIVER_I LTR Pao 212 963 -4680 8 672 3568 173 9 11 chrUextra 11478292 11479040 -17525616 + SAR_DM Satellite Satellite 256 1002 -470 8 672 6546 7 0 1 chrUextra 11479140 11479888 -17524768 - PROTOP DNA P -906 3574 2828 8 672 6812 3 0 0 chrUextra 11479988 11480736 -17523920 + DOC LINE Jockey 3631 4378 -347 8 672 3618 7 2 2 chrUextra 11480836 11481252 -17523404 - ACCORD_I LTR Gypsy -5872 416 1 8 672 3017 0 0 0 chrUextra 11481252 11481584 -17523072 - ACCORD_LTR LTR Gypsy 0 558 227 8 672 6825 0 1 1 chrUextra 11481684 11482432 -17522224 - LSU-rRNA_Dme rRNA rRNA -268 3632 2885 8 672 3030 213 56 20 chrUextra 11482540 11483278 -17521378 + HETA LINE telomeric 594 1357 -4724 8 672 3140 185 7 14 chrUextra 11483380 11484094 -17520562 - SAR_DM Satellite Satellite -572 900 192 8 672 838 92 0 8 chrUextra 11483997 11484128 -17520528 + ARS406_DM Unknown Unknown 1 130 -223 8 672 3243 168 14 20 chrUextra 11484233 11484942 -17519714 - SAR_DM Satellite Satellite -577 895 191 8 672 47 0 0 0 chrUextra 11485403 11485450 -17519206 + AT_rich Low_complexity Low_complexity 1 47 0 8 672 606 28 0 14 chrUextra 11485924 11485997 -17518659 + PROTOP DNA P 4407 4479 -1 8 672 26 30 0 0 chrUextra 11486379 11486412 -17518244 + AT_rich Low_complexity Low_complexity 1 33 0 8 672 29 60 0 0 chrUextra 11486452 11486502 -17518154 + AT_rich Low_complexity Low_complexity 1 50 0 8 672 3125 179 24 26 chrUextra 11486772 11487514 -17517142 + SAR_DM Satellite Satellite 432 1172 -300 8 672 2412 0 0 0 chrUextra 11487620 11487889 -17516767 + HMSBEAGLE_I LTR Gypsy 6261 6529 0 8 672 2421 8 0 0 chrUextra 11487889 11488155 -17516501 + DMLTR5 LTR Gypsy 1 266 0 8 672 1002 143 0 0 chrUextra 11488155 11488330 -17516326 + (TA)n Simple_repeat Simple_repeat 2 176 0 8 672 5768 58 3 4 chrUextra 11488469 11489216 -17515440 - IDEFIX_I LTR Gypsy -2639 2989 2244 8 672 6597 16 0 0 chrUextra 11489316 11490064 -17514592 + R1_DM LINE R1 4007 4754 -602 8 672 6507 5 1 0 chrUextra 11490164 11490912 -17513744 + QUASIMODO_I LTR Gypsy 2839 3587 -2473 8 672 1384 0 0 0 chrUextra 11491012 11491167 -17513489 - ALUII_DM Unknown Unknown -85 155 1 8 672 21 57 0 0 chrUextra 11491167 11491202 -17513454 + AT_rich Low_complexity Low_complexity 1 35 0 8 672 22 35 0 0 chrUextra 11491396 11491425 -17513231 + AT_rich Low_complexity Low_complexity 1 29 0 8 672 37 39 0 0 chrUextra 11491526 11491577 -17513079 + AT_rich Low_complexity Low_complexity 1 51 0 8 672 2554 98 40 27 chrUextra 11491874 11492607 -17512049 + DMSAT6 Satellite Satellite 1 742 0 8 672 6753 5 0 0 chrUextra 11492708 11493456 -17511200 + R1_DM LINE R1 1979 2726 -2630 8 672 2111 4 0 0 chrUextra 11493556 11493791 -17510865 + R2_DM LINE R2 3369 3603 -4 8 672 4606 8 2 0 chrUextra 11493787 11494304 -17510352 + LSU-rRNA_Dme rRNA rRNA 2578 3095 -805 8 672 5433 48 38 0 chrUextra 11494404 11495149 -17509507 - DM297_I LTR Gypsy -2044 4123 3351 8 672 6658 1 0 0 chrUextra 11495252 11496000 -17508656 - DM176_I LTR Gypsy -3064 3356 2609 8 672 34 24 0 0 chrUextra 11496506 11496547 -17508109 + AT_rich Low_complexity Low_complexity 1 41 0 8 672 21 95 0 0 chrUextra 11496760 11496823 -17507833 + AT_rich Low_complexity Low_complexity 1 63 0 8 672 6817 3 1 0 chrUextra 11496948 11497696 -17506960 - LSU-rRNA_Dme rRNA rRNA -3 3897 3149 8 672 253 0 0 86 chrUextra 11497796 11497831 -17506825 - NTS_DM Other Other -184 56 25 8 672 22 56 0 0 chrUextra 11497857 11497893 -17506763 + AT_rich Low_complexity Low_complexity 1 36 0 8 672 239 125 0 24 chrUextra 11497906 11497947 -17506709 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 672 262 150 0 0 chrUextra 11497990 11498030 -17506626 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 672 262 150 0 0 chrUextra 11498082 11498122 -17506534 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 672 262 150 0 0 chrUextra 11498174 11498214 -17506442 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 672 22 56 0 0 chrUextra 11498219 11498255 -17506401 + AT_rich Low_complexity Low_complexity 1 36 0 8 672 1959 5 0 0 chrUextra 11498327 11498544 -17506112 - LSU-rRNA_Dme rRNA rRNA 0 3900 3684 8 672 1834 0 0 0 chrUextra 11498644 11498843 -17505813 + ROO_LTR LTR Pao 230 428 0 8 672 982 307 3 8 chrUextra 11499492 11499873 -17504783 - MDG3_I LTR Gypsy -915 4071 3693 8 672 381 248 0 0 chrUextra 11499888 11499989 -17504667 - MDG3_I LTR Gypsy -1347 3639 3539 8 672 464 301 6 11 chrUextra 11500018 11500196 -17504460 - MDG3_I LTR Gypsy -1478 3508 3332 8 672 2532 103 28 18 chrUextra 11500340 11501082 -17503574 + DMSAT6 Satellite Satellite 1 750 -108 8 672 6420 16 7 1 chrUextra 11501188 11501936 -17502720 - DOC2_DM LINE Jockey -1091 3702 2951 8 672 4640 13 0 2 chrUextra 11502036 11502570 -17502086 + FW_DM LINE Jockey 4150 4682 -10 8 672 28 48 0 0 chrUextra 11502895 11502937 -17501719 + AT_rich Low_complexity Low_complexity 1 42 0 8 672 514 119 36 0 chrUextra 11503211 11503295 -17501361 - NTS_DM Other Other -150 90 4 8 672 1355 6 0 18 chrUextra 11503405 11503570 -17501086 - NTS_DM Other Other -78 162 1 8 672 388 0 65 48 chrUextra 11503570 11503632 -17501024 - NTS_DM Other Other 0 240 178 8 672 2990 79 65 15 chrUextra 11503732 11504480 -17500176 + Gypsy12_I LTR Gypsy 4753 5538 -8 8 672 28 48 0 0 chrUextra 11504787 11504829 -17499827 + AT_rich Low_complexity Low_complexity 1 42 0 8 672 514 119 36 0 chrUextra 11505102 11505186 -17499470 - NTS_DM Other Other -150 90 4 8 672 3537 172 21 9 chrUextra 11505428 11506173 -17498483 + SAR_DM Satellite Satellite 284 1037 -435 8 672 808 307 37 29 chrUextra 11506277 11506652 -17498004 + Gypsy4_I LTR Gypsy 2372 3148 -3424 8 672 1556 24 19 0 chrUextra 11506652 11506864 -17497792 + TLD2 Unknown Unknown 1 216 -2 8 672 808 307 37 29 chrUextra 11506864 11506982 -17497674 + Gypsy4_I LTR Gypsy 3149 3397 -3175 8 672 3753 151 11 8 chrUextra 11507142 11507871 -17496785 + SAR_DM Satellite Satellite 326 1056 -416 8 672 6717 1 0 1 chrUextra 11507972 11508720 -17495936 - DOC LINE Jockey -2050 2675 1929 8 672 28 48 0 0 chrUextra 11508906 11508948 -17495708 + AT_rich Low_complexity Low_complexity 1 42 0 8 672 513 129 24 0 chrUextra 11509221 11509306 -17495350 - NTS_DM Other Other -150 90 4 8 672 1200 7 7 20 chrUextra 11509416 11509568 -17495088 - NTS_DM Other Other -78 162 13 8 672 3812 9 0 0 chrUextra 11509668 11510096 -17494560 + FW_DM LINE Jockey 606 1033 -3659 8 672 2780 22 0 0 chrUextra 11510094 11510416 -17494240 + FW_DM LINE Jockey 1271 1592 -3100 8 672 4755 2 0 2 chrUextra 11510516 11511042 -17493614 + R1_DM LINE R1 4832 5356 0 8 672 2018 9 0 0 chrUextra 11511040 11511264 -17493392 + LSU-rRNA_Dme rRNA rRNA 2640 2863 -1037 8 672 6729 3 1 0 chrUextra 11511364 11512112 -17492544 + ROO_I LTR Pao 7074 7822 -434 8 672 3727 270 16 28 chrUextra 11512221 11513808 -17490848 + SAR_DM Satellite Satellite 1 1567 -216 8 672 6131 12 0 40 chrUextra 11513908 11514656 -17490000 - CIRCE LINE Composite -2014 4342 3625 8 672 1582 108 0 91 chrUextra 11514756 11515042 -17489614 - R1_DM LINE R1 -4523 833 574 8 672 819 120 83 60 chrUextra 11515043 11515211 -17489445 - R1_DM LINE R1 -5184 172 1 8 672 1953 64 4 36 chrUextra 11515229 11515504 -17489152 + Gypsy6A_LTR LTR Gypsy 71 336 -84 8 672 6694 1 1 1 chrUextra 11515604 11516345 -17488311 + LSU-rRNA_Dme rRNA rRNA 1892 2632 -1268 8 672 6723 4 0 0 chrUextra 11516452 11517200 -17487456 + DOC LINE Jockey 1841 2588 -2137 8 672 293 172 16 0 chrUextra 11517303 11517367 -17487289 + XDMR Unknown Unknown 297 361 0 8 672 3294 178 9 20 chrUextra 11517312 11518048 -17486608 - SAR_DM Satellite Satellite -354 1118 391 8 672 4449 2 0 0 chrUextra 11518148 11518637 -17486019 + LSU-rRNA_Dme rRNA rRNA 2158 2646 -1254 8 672 2355 0 0 0 chrUextra 11518635 11518896 -17485760 + R1_DM LINE R1 2994 3254 -2102 8 672 3237 184 7 10 chrUextra 11518996 11519717 -17484939 - SAR_DM Satellite Satellite -559 913 195 8 672 836 83 0 0 chrUextra 11519624 11519744 -17484912 + ARS406_DM Unknown Unknown 1 120 -233 8 672 6027 0 0 0 chrUextra 11519844 11520514 -17484142 + BARI_DM DNA Tc1 1058 1727 -1 8 672 678 0 13 0 chrUextra 11520514 11520592 -17484064 + BARI_DM DNA Tc1 4 82 -1646 8 672 6650 0 0 3 chrUextra 11520692 11521440 -17483216 + ROO_I LTR Pao 1955 2700 -5556 8 672 3378 185 8 9 chrUextra 11521540 11522286 -17482370 - SAR_DM Satellite Satellite -446 1026 282 8 672 6630 1 13 0 chrUextra 11522388 11523136 -17481520 - DMRT1B LINE R1 -2261 2922 2165 8 672 3501 169 10 8 chrUextra 11523252 11523982 -17480674 + SAR_DM Satellite Satellite 326 1056 -416 8 672 6581 18 0 4 chrUextra 11524084 11524832 -17479824 - BATUMI_I LTR Pao -1986 5977 5233 8 672 1000 0 0 0 chrUextra 11524932 11525042 -17479614 - DOC LINE Jockey -4614 111 2 8 672 703 248 36 73 chrUextra 11525128 11525458 -17479198 + Gypsy12_LTR LTR Gypsy 832 1149 -1187 8 672 402 244 79 30 chrUextra 11525479 11525679 -17478977 + Gypsy12_LTR LTR Gypsy 1643 1883 -453 8 672 1017 86 40 0 chrUextra 11525780 11525931 -17478725 - ROVER-LTR_DM LTR Gypsy -210 157 1 8 672 1705 158 55 13 chrUextra 11525939 11526336 -17478320 - ROVER-I_DM LTR Gypsy -18 6566 6153 8 672 3214 189 8 16 chrUextra 11526628 11527367 -17477289 + SAR_DM Satellite Satellite 387 1119 -353 8 672 283 175 32 0 chrUextra 11527313 11527376 -17477280 - XDMR Unknown Unknown 0 361 297 8 672 311 0 0 0 chrUextra 11527476 11527511 -17477145 + STALKER4_I LTR Gypsy 6496 6530 0 8 672 3164 51 25 15 chrUextra 11527511 11527940 -17476716 + STALKER4_LTR LTR Gypsy 1 391 -11 8 672 854 139 12 146 chrUextra 11527968 11528221 -17476435 - Gypsy12_LTR LTR Gypsy -845 1491 1273 8 672 2964 3 0 0 chrUextra 11528323 11528653 -17476003 - Invader3_I LTR Gypsy -4558 330 1 8 672 2487 7 42 0 chrUextra 11528653 11528939 -17475717 - Invader3_LTR LTR Gypsy 0 298 1 8 672 1025 15 23 0 chrUextra 11528939 11529070 -17475586 - Invader3_I LTR Gypsy 0 4888 4755 8 672 6488 1 1 0 chrUextra 11529170 11529917 -17474739 + DM176_I LTR Gypsy 1784 2531 -3889 8 672 6571 9 8 0 chrUextra 11530017 11530764 -17473892 + Copia2_I LTR Copia 203 955 -3207 8 672 5800 22 16 4 chrUextra 11530867 11531611 -17473045 + MDG1_I LTR Gypsy 619 1371 -5225 8 672 974 73 5 14 chrUextra 11531711 11532450 -17472206 + RSP Satellite Satellite 1 732 0 8 672 21 95 0 0 chrUextra 11533645 11533708 -17470948 + AT_rich Low_complexity Low_complexity 1 63 0 8 672 3407 2 0 62 chrUextra 11533720 11534152 -17470504 + LSU-rRNA_Dme rRNA rRNA 1 405 -3495 8 10 1335 24 0 6 chrUextra 11534254 11534424 -17470232 - NTS_DM Other Other -34 206 38 8 673 851 0 0 0 chrUextra 11534424 11534520 -17470136 - NTS_DM Other Other -107 133 38 8 673 840 9 9 36 chrUextra 11534520 11534632 -17470024 - NTS_DM Other Other -107 133 25 8 673 21 57 0 0 chrUextra 11534658 11534693 -17469963 + AT_rich Low_complexity Low_complexity 1 35 0 8 673 1304 18 0 6 chrUextra 11534693 11534858 -17469798 - NTS_DM Other Other -39 201 38 8 673 907 9 0 27 chrUextra 11534858 11534970 -17469686 - NTS_DM Other Other -107 133 25 8 673 1134 0 0 0 chrUextra 11535101 11535225 -17469431 - DOC LINE Jockey -4599 126 3 8 673 721 60 0 0 chrUextra 11535221 11535321 -17469335 + ARS406_DM Unknown Unknown 59 158 -195 8 673 2550 175 17 6 chrUextra 11535318 11535846 -17468810 - SAR_DM Satellite Satellite -558 914 381 8 673 1323 124 0 14 chrUextra 11535947 11536167 -17468489 + DMSAT6 Satellite Satellite 254 470 0 8 673 2519 100 8 61 chrUextra 11536188 11536680 -17467976 + DMSAT6 Satellite Satellite 5 470 0 8 673 6551 7 0 0 chrUextra 11536793 11537540 -17467116 + Invader2_I LTR Gypsy 946 1692 -2900 8 673 6440 3 0 1 chrUextra 11537640 11538387 -17466269 - STALKER4_I LTR Gypsy -3090 3440 2695 8 673 6172 42 4 0 chrUextra 11538487 11539234 -17465422 + R1_DM LINE R1 1169 1918 -3438 8 673 624 133 0 9 chrUextra 11539334 11539448 -17465208 - ARS406_DM Unknown Unknown -240 113 1 8 673 3173 185 28 11 chrUextra 11539354 11540081 -17464575 + SAR_DM Satellite Satellite 195 933 -539 8 673 3093 186 16 30 chrUextra 11540181 11540928 -17463728 + SAR_DM Satellite Satellite 436 1172 -300 8 673 307 25 25 0 chrUextra 11541041 11541081 -17463575 + TART LINE telomeric 10628 10668 -3809 8 673 2663 203 44 43 chrUextra 11541075 11541775 -17462881 + TAHRE LINE telomeric 7171 7871 -2592 8 673 25 48 0 46 chrUextra 11542938 11543003 -17461653 + AT_rich Low_complexity Low_complexity 1 62 0 8 673 3279 16 3 0 chrUextra 11543569 11543946 -17460710 + R1_DM LINE R1 4979 5356 0 8 673 2586 60 6 6 chrUextra 11543979 11544316 -17460340 + R1_DM LINE R1 1 337 -5019 8 673 6578 1 0 0 chrUextra 11544416 11545163 -17459493 + TABOR_I LTR Gypsy 1546 2292 -4044 8 673 2894 6 47 0 chrUextra 11545263 11545606 -17459050 + IDEFIX_LTR LTR Gypsy 236 594 0 8 673 229 270 67 67 chrUextra 11545709 11545919 -17458737 + TIRANT_I LTR Gypsy 5093 5302 -2390 8 673 3199 183 39 12 chrUextra 11546112 11546857 -17457799 + SAR_DM Satellite Satellite 259 1023 -449 8 673 710 192 175 52 chrUextra 11546980 11547314 -17457342 + TART LINE telomeric 10116 10491 -3986 8 673 2083 33 96 4 chrUextra 11547432 11547704 -17456952 + PROTOP DNA P 1 297 -4183 8 673 2096 40 0 0 chrUextra 11547805 11548052 -17456604 + PROTOP DNA P 4234 4480 0 8 673 6318 23 7 1 chrUextra 11548651 11549398 -17455258 - R1_DM LINE R1 -2141 3215 2465 8 673 3642 76 45 25 chrUextra 11549514 11550186 -17454470 + PROTOP_A DNA P 520 1153 0 8 673 6597 1 0 0 chrUextra 11550345 11551088 -17453568 + DM176_I LTR Gypsy 3620 4362 -2058 8 673 3714 100 69 36 chrUextra 11551192 11551925 -17452731 - STALKER4_I LTR Gypsy -5225 1305 485 8 673 6430 20 4 1 chrUextra 11552039 11552786 -17451870 - R1_DM LINE R1 -1513 3843 3095 8 673 3548 3 0 0 chrUextra 11552886 11553274 -17451382 + ROO_LTR LTR Pao 41 428 0 8 673 2101 192 74 31 chrUextra 11553900 11554480 -17450176 + STALKER4_I LTR Gypsy 885 1489 -5041 8 673 485 0 0 0 chrUextra 11554580 11554633 -17450023 - NTS_DM Other Other -150 90 38 8 673 907 9 0 27 chrUextra 11554633 11554745 -17449911 - NTS_DM Other Other -107 133 25 8 673 1304 18 0 6 chrUextra 11554797 11554962 -17449694 - NTS_DM Other Other -39 201 38 8 673 907 9 0 27 chrUextra 11554962 11555074 -17449582 - NTS_DM Other Other -107 133 25 8 673 22 56 0 0 chrUextra 11555100 11555136 -17449520 + AT_rich Low_complexity Low_complexity 1 36 0 8 673 269 125 0 0 chrUextra 11555149 11555189 -17449467 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 673 239 175 0 0 chrUextra 11555232 11555272 -17449384 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 673 514 119 36 0 chrUextra 11555631 11555715 -17448941 - NTS_DM Other Other -150 90 4 8 673 1355 6 0 18 chrUextra 11555825 11555990 -17448666 - NTS_DM Other Other -78 162 1 8 673 1377 6 22 16 chrUextra 11555990 11556174 -17448482 - NTS_DM Other Other 0 240 56 8 673 3652 23 0 11 chrUextra 11556274 11556707 -17447949 - BATUMI_I LTR Pao -1864 6099 5672 8 673 2745 3 0 0 chrUextra 11556705 11557021 -17447635 - BATUMI_I LTR Pao -2648 5315 5000 8 673 6044 12 1 1 chrUextra 11557121 11557868 -17446788 - ROO_I LTR Pao -4579 3677 2931 8 673 5278 51 44 1 chrUextra 11558815 11559562 -17445094 + I_DM LINE I 261 1039 -5192 8 673 6180 18 0 12 chrUextra 11559662 11560409 -17444247 - Gypsy12_I LTR Gypsy -43 5503 4766 8 673 3923 14 27 0 chrUextra 11560509 11560996 -17443660 - IDEFIX_LTR LTR Gypsy -94 500 1 8 673 1748 77 0 0 chrUextra 11560996 11561255 -17443401 - IDEFIX_I LTR Gypsy -1443 4185 3927 8 673 3039 184 23 8 chrUextra 11561360 11562103 -17442553 - SAR_DM Satellite Satellite -435 1037 284 8 673 521 324 13 42 chrUextra 11562409 11562715 -17441941 + HMSBEAGLE_I LTR Gypsy 2650 2946 -3583 8 673 266 178 0 0 chrUextra 11562905 11562950 -17441706 + HMSBEAGLE_I LTR Gypsy 3177 3221 -3308 8 673 6173 12 7 0 chrUextra 11563897 11564644 -17440012 - QUASIMODO_I LTR Gypsy -2789 3271 2520 8 673 5047 22 5 6 chrUextra 11564850 11565491 -17439165 - PROTOP_A DNA P 0 1105 466 8 673 5699 29 10 7 chrUextra 11565613 11566338 -17438318 - CIRCE LINE Composite -3619 2737 2011 8 673 469 321 18 18 chrUextra 11566903 11567185 -17437471 - Gypsy4_I LTR Gypsy -2815 3473 3192 8 673 654 309 41 39 chrUextra 11567290 11567930 -17436726 + SAR_DM Satellite Satellite 269 909 -563 8 673 508 272 29 26 chrUextra 11567712 11568021 -17436635 - XDMR_DM Unknown Unknown -9 351 42 8 673 5613 31 56 16 chrUextra 11568132 11568879 -17435777 + CIRCE LINE Composite 2275 3051 -3305 8 673 6505 0 0 0 chrUextra 11568979 11569726 -17434930 - FW_DM LINE Jockey -2010 2682 1936 8 673 1252 18 0 6 chrUextra 11569856 11570021 -17434635 - NTS_DM Other Other -39 201 38 8 673 852 18 0 27 chrUextra 11570021 11570133 -17434523 - NTS_DM Other Other -107 133 25 8 673 1252 18 0 6 chrUextra 11570185 11570350 -17434306 - NTS_DM Other Other -39 201 38 8 673 870 9 0 27 chrUextra 11570350 11570462 -17434194 - NTS_DM Other Other -107 133 25 8 673 385 35 0 17 chrUextra 11570514 11570573 -17434083 - NTS_DM Other Other -39 201 144 8 673 5794 45 0 0 chrUextra 11570673 11571420 -17433236 - IDEFIX_I LTR Gypsy -2766 2862 2116 8 673 5214 92 3 5 chrUextra 11571520 11572267 -17432389 - Gypsy12_I LTR Gypsy -3479 2067 1323 8 673 6291 0 0 1 chrUextra 11572367 11573114 -17431542 - ROO_I LTR Pao -4321 3935 3190 8 673 1748 0 5 0 chrUextra 11573214 11573422 -17431234 - BLOOD_I LTR Gypsy -6404 209 1 8 673 3466 8 0 0 chrUextra 11573422 11573821 -17430835 - BLOOD_LTR LTR Gypsy 0 399 1 8 673 426 237 0 0 chrUextra 11573822 11573961 -17430695 + (TTTG)n Simple_repeat Simple_repeat 4 142 0 8 673 5952 0 0 35 chrUextra 11574061 11574808 -17429848 + LSU-rRNA_Dme rRNA rRNA 108 828 -3072 8 673 21 89 0 0 chrUextra 11575355 11575411 -17429245 + AT_rich Low_complexity Low_complexity 1 56 0 8 673 23 68 0 0 chrUextra 11575449 11575493 -17429163 + AT_rich Low_complexity Low_complexity 1 44 0 8 673 26 30 0 0 chrUextra 11575536 11575569 -17429087 + AT_rich Low_complexity Low_complexity 1 33 0 8 673 6461 3 0 0 chrUextra 11575755 11576502 -17428154 - R1_DM LINE R1 -523 4833 4087 8 673 1266 37 0 0 chrUextra 11576602 11576763 -17427893 - R1_DM LINE R1 -3640 1716 1556 8 673 1664 56 0 0 chrUextra 11576774 11576987 -17427669 - R1_DM LINE R1 -3897 1459 1247 8 673 2619 56 0 8 chrUextra 11576989 11577347 -17427309 - R1_DM LINE R1 -4745 611 257 8 673 2878 155 29 28 chrUextra 11577481 11578196 -17426460 + Gypsy8_I LTR Gypsy 1035 1489 -2858 8 673 1599 45 3 0 chrUextra 11578296 11578608 -17426048 + (CTATT)n Simple_repeat Simple_repeat 1 312 0 8 673 608 56 11 0 chrUextra 11578624 11578713 -17425943 + (CTATT)n Simple_repeat Simple_repeat 3 92 0 8 673 1287 63 0 0 chrUextra 11578760 11578934 -17425722 + (CTATT)n Simple_repeat Simple_repeat 4 177 0 8 673 687 44 0 0 chrUextra 11578952 11579043 -17425613 + (CTATT)n Simple_repeat Simple_repeat 2 92 0 8 673 1937 248 21 70 chrUextra 11579144 11579890 -17424766 - Gypsy12_LTR LTR Gypsy -1447 889 180 8 673 549 0 0 0 chrUextra 11579990 11580051 -17424605 + (CACAA)n Simple_repeat Simple_repeat 2 62 0 8 673 5730 6 32 0 chrUextra 11580051 11580731 -17423925 + DMRT1B LINE R1 4482 5183 0 8 673 5444 24 91 0 chrUextra 11580837 11581584 -17423072 - R1_DM LINE R1 -1562 3794 2980 8 673 6362 0 1 0 chrUextra 11581687 11582431 -17422225 + BLOOD_I LTR Gypsy 2240 2984 -3629 8 673 6472 1 0 0 chrUextra 11582534 11583278 -17421378 - STALKER4_I LTR Gypsy -2043 4487 3744 8 673 22 35 0 0 chrUextra 11583727 11583756 -17420900 + AT_rich Low_complexity Low_complexity 1 29 0 8 673 268 329 19 25 chrUextra 11583949 11584111 -17420545 + HMSBEAGLE_I LTR Gypsy 1451 1611 -4918 8 673 2881 174 31 27 chrUextra 11584225 11584968 -17419688 + SAR_DM Satellite Satellite 445 1190 -282 8 673 3070 186 8 19 chrUextra 11585075 11585819 -17418837 + SAR_DM Satellite Satellite 282 1017 -455 8 673 6214 20 1 0 chrUextra 11585919 11586666 -17417990 - R1_DM LINE R1 -318 5038 4291 8 673 3689 2 5 0 chrUextra 11586768 11587201 -17417455 - LSU-rRNA_Dme rRNA rRNA -826 3074 2640 8 673 2673 0 0 6 chrUextra 11587199 11587513 -17417143 - R1_DM LINE R1 0 5356 5045 8 673 446 343 30 24 chrUextra 11587615 11587985 -17416671 - DIVER2_I LTR Pao -1811 2336 1965 8 673 319 343 21 25 chrUextra 11588089 11588325 -17416331 - DIVER2_I LTR Pao -2321 1826 1592 8 673 6471 1 0 0 chrUextra 11588460 11589207 -17415449 - Invader3_I LTR Gypsy -652 4236 3490 8 673 3813 9 0 0 chrUextra 11589309 11589751 -17414905 - Copia2_I LTR Copia -195 3967 3526 8 673 893 0 0 0 chrUextra 11590154 11590256 -17414400 - R1_DM LINE R1 -2024 3332 3231 8 673 3301 3 0 0 chrUextra 11590268 11590649 -17414007 - R1_DM LINE R1 0 5356 4976 8 673 666 12 0 35 chrUextra 11590645 11590731 -17413925 - NTS_DM Other Other -133 107 25 8 673 22 56 0 0 chrUextra 11590757 11590793 -17413863 + AT_rich Low_complexity Low_complexity 1 36 0 8 673 243 125 0 0 chrUextra 11590806 11590846 -17413810 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 673 3610 7 0 0 chrUextra 11591001 11591426 -17413230 - FW_DM LINE Jockey -2997 1695 1271 8 673 2736 12 3 0 chrUextra 11591424 11591748 -17412908 - FW_DM LINE Jockey -3659 1033 709 8 673 2073 171 12 9 chrUextra 11591848 11592584 -17412072 - SAR_DM Satellite Satellite -419 737 1 8 673 1284 86 0 0 chrUextra 11592695 11592869 -17411787 + BS3_DM LINE Jockey 248 421 -1369 8 673 3855 66 4 0 chrUextra 11592869 11593386 -17411270 + BS3_DM LINE Jockey 526 1044 -746 8 673 346 167 15 0 chrUextra 11593376 11593442 -17411214 + BS3_DM LINE Jockey 1311 1377 -413 8 673 228 122 24 0 chrUextra 11593907 11593948 -17410708 + PROTOP DNA P 874 915 -3565 8 673 460 176 392 0 chrUextra 11593947 11594156 -17410500 + PROTOP DNA P 3959 4248 -232 8 673 3221 152 15 31 chrUextra 11594398 11595117 -17409539 - SAR_DM Satellite Satellite -396 1076 369 8 673 455 0 0 18 chrUextra 11595236 11595293 -17409363 + STALKER4_LTR LTR Gypsy 347 402 0 8 673 589 39 0 0 chrUextra 11595312 11595389 -17409267 + ROOA_I LTR Pao 2393 2469 -4380 8 673 2063 16 0 0 chrUextra 11595414 11595661 -17408995 + ROOA_I LTR Pao 2551 2797 -4052 8 673 2580 26 0 0 chrUextra 11595673 11595983 -17408673 + ROOA_I LTR Pao 2869 3178 -3671 8 673 1048 65 0 0 chrUextra 11596083 11596222 -17408434 + R1_DM LINE R1 1321 1459 -3897 8 673 4140 22 4 0 chrUextra 11596233 11596741 -17407915 + R1_DM LINE R1 1556 2065 -3291 8 673 677 35 0 0 chrUextra 11596743 11596830 -17407826 + R1_DM LINE R1 2394 2480 -2876 8 673 3442 236 17 16 chrUextra 11596934 11598497 -17406159 + SAR_DM Satellite Satellite 1 1565 -208 8 673 5939 9 1 0 chrUextra 11598681 11599371 -17405285 - LSU-rRNA_Dme rRNA rRNA -7 3893 3203 8 673 644 186 7 14 chrUextra 11599550 11599692 -17404964 - HETRP_DM Satellite Satellite -203 1669 1529 8 673 657 186 7 14 chrUextra 11599830 11599972 -17404684 - HETRP_DM Satellite Satellite -203 1669 1529 8 673 404 252 0 9 chrUextra 11600110 11600218 -17404438 - HETRP_DM Satellite Satellite -203 1669 1563 8 673 811 53 0 0 chrUextra 11600318 11600431 -17404225 - IVK_DM LINE I -1373 4029 3917 8 673 3143 144 27 29 chrUextra 11600435 11601065 -17403591 + Gypsy12_LTR LTR Gypsy 1706 2334 -2 8 673 3304 154 47 24 chrUextra 11601165 11601910 -17402746 - TART LINE telomeric -4764 9713 8952 8 673 6343 12 0 0 chrUextra 11602012 11602759 -17401897 - R1_DM LINE R1 -3294 2062 1316 8 673 2876 193 11 10 chrUextra 11602861 11603593 -17401063 + SAR_DM Satellite Satellite 205 937 -535 8 673 2849 188 18 14 chrUextra 11603706 11604451 -17400205 + SAR_DM Satellite Satellite 1 747 -262 8 673 5948 38 1 0 chrUextra 11604556 11605299 -17399357 + R1_DM LINE R1 1157 1900 -3456 8 673 3188 174 11 12 chrUextra 11605399 11606145 -17398511 - SAR_DM Satellite Satellite -444 1028 284 8 673 6123 7 0 3 chrUextra 11606245 11606991 -17397665 + DM176_I LTR Gypsy 1533 2276 -4144 8 673 1411 0 0 0 chrUextra 11607091 11607252 -17397404 + NOMAD_I LTR Gypsy 6412 6572 0 8 673 4527 0 0 0 chrUextra 11607252 11607770 -17396886 + NOMAD_LTR LTR Gypsy 1 518 0 8 673 243 0 134 0 chrUextra 11607770 11607837 -17396819 + (TA)n Simple_repeat Simple_repeat 1 76 0 8 673 5638 3 1 3 chrUextra 11607937 11608594 -17396062 + SSU-rRNA_Dme rRNA rRNA 1329 1984 -11 8 673 1120 236 0 21 chrUextra 11608783 11609073 -17395583 - Gypsy5_I LTR Gypsy -1329 5180 4897 8 673 539 251 50 18 chrUextra 11609093 11609312 -17395344 - Gypsy5_I LTR Gypsy -1672 4837 4612 8 673 951 174 0 0 chrUextra 11609312 11609490 -17395166 + CT-rich Low_complexity Low_complexity 1 178 0 8 673 3149 46 24 0 chrUextra 11609629 11610040 -17394616 + TART_B1 LINE telomeric 3208 3628 -7026 8 673 2275 98 45 0 chrUextra 11610038 11610375 -17394281 + TART_B1 LINE telomeric 4415 4766 -5888 8 673 908 70 7 19 chrUextra 11610485 11611070 -17393586 - RSP Satellite Satellite 0 578 1 8 673 579 26 0 25 chrUextra 11611141 11611221 -17393435 - RSP Satellite Satellite 0 118 41 8 673 6007 25 1 1 chrUextra 11611321 11612067 -17392589 + R1_DM LINE R1 3696 4441 -915 8 673 1151 15 0 0 chrUextra 11612167 11612302 -17392354 - R2_DM LINE R2 -3471 136 2 8 673 5211 2 0 0 chrUextra 11612315 11612913 -17391743 - LSU-rRNA_Dme rRNA rRNA -1382 2518 1921 8 673 2260 0 4 0 chrUextra 11613061 11613336 -17391320 - Copia_LTR LTR Copia 0 276 1 8 673 2399 0 0 0 chrUextra 11613336 11613613 -17391043 - Copia_I LTR Copia 0 4593 4317 8 673 1144 0 7 0 chrUextra 11613613 11613759 -17390897 - Copia_I LTR Copia -2805 1788 1642 8 673 602 313 59 43 chrUextra 11613863 11614590 -17390066 + MDG1_I LTR Gypsy 2180 2918 -3678 8 673 1456 231 73 90 chrUextra 11614707 11615451 -17389205 + Gypsy12A_LTR LTR Gypsy 1348 2078 -202 8 673 6212 4 17 1 chrUextra 11615551 11616297 -17388359 + DOC2_DM LINE Jockey 2425 3182 -1611 8 673 6067 3 0 0 chrUextra 11616397 11617095 -17387561 - ROO_I LTR Pao -529 7727 7030 8 673 409 67 50 0 chrUextra 11617083 11617143 -17387513 - ROO_I LTR Pao -2475 5781 5719 8 673 572 0 0 0 chrUextra 11617243 11617309 -17387347 - LSU-rRNA_Dme rRNA rRNA -3834 66 1 8 673 21 95 0 0 chrUextra 11617321 11617384 -17387272 + AT_rich Low_complexity Low_complexity 1 63 0 8 673 34 24 0 0 chrUextra 11617597 11617638 -17387018 + AT_rich Low_complexity Low_complexity 1 41 0 8 673 1469 121 57 3 chrUextra 11618309 11618591 -17386065 - DNAREP1_DM LINE Penelope -297 297 1 8 673 5604 47 15 0 chrUextra 11618935 11619681 -17384975 + R1_DM LINE R1 368 1124 -4232 8 673 2694 204 10 12 chrUextra 11619786 11620504 -17384152 - SAR_DM Satellite Satellite -577 895 180 8 673 637 140 0 23 chrUextra 11620395 11620527 -17384129 + ARS406_DM Unknown Unknown 1 129 -224 8 673 876 24 0 8 chrUextra 11620627 11620755 -17383901 + NTS_DM Other Other 75 201 -39 8 673 870 9 0 27 chrUextra 11620807 11620919 -17383737 + NTS_DM Other Other 25 133 -107 8 673 1252 18 0 6 chrUextra 11620919 11621084 -17383572 + NTS_DM Other Other 38 201 -39 8 673 870 9 0 27 chrUextra 11621137 11621249 -17383407 + NTS_DM Other Other 25 133 -107 8 673 866 9 17 0 chrUextra 11621249 11621364 -17383292 + NTS_DM Other Other 38 154 -86 8 673 28 48 0 0 chrUextra 11621524 11621566 -17383090 + AT_rich Low_complexity Low_complexity 1 42 0 8 673 32 0 0 0 chrUextra 11621894 11621926 -17382730 + AT_rich Low_complexity Low_complexity 1 32 0 8 673 1382 6 0 0 chrUextra 11622058 11622219 -17382437 + SSU-rRNA_Dme rRNA rRNA 1 161 -1834 8 673 207 0 0 0 chrUextra 11623165 11623188 -17381468 + (TC)n Simple_repeat Simple_repeat 2 24 0 8 673 640 193 7 14 chrUextra 11623319 11623461 -17381195 - HETRP_DM Satellite Satellite -203 1669 1529 8 673 629 193 7 14 chrUextra 11623596 11623738 -17380918 - HETRP_DM Satellite Satellite -203 1669 1529 8 673 6034 20 1 0 chrUextra 11624015 11624753 -17379903 - Gypsy4_I LTR Gypsy -759 5529 4791 8 673 741 11 0 31 chrUextra 11625703 11625799 -17378857 - NTS_DM Other Other -123 117 25 8 673 22 56 0 0 chrUextra 11625825 11625861 -17378795 + AT_rich Low_complexity Low_complexity 1 36 0 8 673 255 125 0 0 chrUextra 11625874 11625914 -17378742 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 673 246 150 0 0 chrUextra 11625957 11625997 -17378659 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 673 246 150 0 0 chrUextra 11626049 11626089 -17378567 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 673 246 150 0 0 chrUextra 11626141 11626181 -17378475 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 673 246 150 0 0 chrUextra 11626233 11626273 -17378383 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 673 29 28 0 0 chrUextra 11626278 11626314 -17378342 + AT_rich Low_complexity Low_complexity 1 36 0 8 673 553 0 0 0 chrUextra 11626386 11626449 -17378207 - LSU-rRNA_Dme rRNA rRNA 0 3900 3838 8 673 2796 0 0 0 chrUextra 11626549 11626874 -17377782 - R1_DM LINE R1 -2175 3181 2857 8 673 6838 51 0 61 chrUextra 11626869 11627792 -17376864 - LSU-rRNA_Dme rRNA rRNA -1246 2654 1788 8 673 2535 0 7 3 chrUextra 11627836 11628141 -17376515 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1483 8 673 2965 172 14 21 chrUextra 11628241 11628987 -17375669 + SAR_DM Satellite Satellite 1 740 -281 8 673 6297 3 1 0 chrUextra 11629087 11629833 -17374823 + ROO_I LTR Pao 3571 4317 -3939 8 673 1527 0 0 0 chrUextra 11629933 11630107 -17374549 + R1_DM LINE R1 5183 5356 0 8 673 5025 2 0 0 chrUextra 11630105 11630679 -17373977 + LSU-rRNA_Dme rRNA rRNA 2640 3213 -687 8 673 360 78 188 0 chrUextra 11630779 11630843 -17373813 - Gypsy12_I LTR Gypsy -1076 4470 4395 8 673 701 154 4 42 chrUextra 11630827 11631011 -17373645 - Gypsy12_I LTR Gypsy -4853 693 459 8 673 1772 90 20 17 chrUextra 11631024 11631317 -17373339 - Gypsy12_I LTR Gypsy -5206 340 47 8 673 789 193 24 24 chrUextra 11631314 11631521 -17373135 - Gypsy12_LTR LTR Gypsy -1938 398 192 8 673 2823 70 5 17 chrUextra 11631626 11632032 -17372624 - Baggins1 LINE LOA -262 5191 4791 8 673 364 102 0 0 chrUextra 11632471 11632530 -17372126 + HETA LINE telomeric 1499 1557 -4524 8 673 1739 73 50 8 chrUextra 11632529 11632791 -17371865 + HETA LINE telomeric 1894 2166 -3915 8 673 2768 101 16 5 chrUextra 11632789 11633217 -17371439 + HETA LINE telomeric 2429 2861 -3220 8 673 344 185 42 100 chrUextra 11633469 11633589 -17371067 - Copia_I LTR Copia -80 4513 4401 8 673 22 56 0 0 chrUextra 11633634 11633670 -17370986 + AT_rich Low_complexity Low_complexity 1 36 0 8 673 1079 186 60 12 chrUextra 11633813 11634063 -17370593 + HETA LINE telomeric 4031 4292 -1789 8 673 6406 0 1 4 chrUextra 11634163 11634909 -17369747 + SSU-rRNA_Dme rRNA rRNA 747 1490 -505 8 673 846 10 0 0 chrUextra 11635855 11635954 -17368702 + BATUMI_I LTR Pao 7188 7286 -677 8 673 2643 143 1 2 chrUextra 11635945 11636601 -17368055 + G_DM LINE Jockey 622 1274 -768 8 673 6376 1 1 0 chrUextra 11636701 11637447 -17367209 + ROO_I LTR Pao 5249 5995 -2261 8 673 346 44 0 0 chrUextra 11638247 11638292 -17366364 + PROTOP_B DNA P 1 45 -1108 8 673 4417 2 0 2 chrUextra 11638395 11638905 -17365751 - LSU-rRNA_Dme rRNA rRNA -1604 2296 1788 8 673 1534 0 11 5 chrUextra 11638949 11639139 -17365517 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1598 8 673 6286 5 0 7 chrUextra 11639239 11639985 -17364671 - DM412 LTR Gypsy -6083 814 74 8 673 5922 16 1 3 chrUextra 11640085 11640831 -17363825 + Invader2_I LTR Gypsy 3077 3821 -771 8 673 2907 187 26 20 chrUextra 11640939 11641675 -17362981 - SAR_DM Satellite Satellite -308 1164 425 8 673 6117 25 3 0 chrUextra 11641777 11642522 -17362134 - R1_DM LINE R1 -1561 3795 3049 8 673 5336 57 39 0 chrUextra 11642623 11643339 -17361317 + Baggins1 LINE LOA 4710 5453 0 8 673 706 265 34 81 chrUextra 11643527 11643934 -17360722 + Gypsy12_LTR LTR Gypsy 679 1066 -1270 8 673 988 166 28 9 chrUextra 11643957 11644170 -17360486 + Gypsy12_LTR LTR Gypsy 1158 1374 -962 8 673 3429 5 0 0 chrUextra 11644315 11644713 -17359943 + LSU-rRNA_Dme rRNA rRNA 2185 2582 -1318 8 673 2985 3 0 0 chrUextra 11644717 11645061 -17359595 + R2_DM LINE R2 985 1328 -2279 8 673 2472 113 10 10 chrUextra 11645193 11645907 -17358749 + DMSAT6 Satellite Satellite 1 714 0 8 673 2316 98 20 14 chrUextra 11646010 11646723 -17357933 - DMSAT6 Satellite Satellite -71 716 1 8 673 5657 50 0 0 chrUextra 11646853 11647599 -17357057 + STALKER4_I LTR Gypsy 4978 5723 -807 8 673 28 48 0 0 chrUextra 11648035 11648077 -17356579 + AT_rich Low_complexity Low_complexity 1 42 0 8 673 427 132 48 0 chrUextra 11648350 11648433 -17356223 - NTS_DM Other Other -150 90 4 8 673 4061 75 23 1 chrUextra 11648554 11649291 -17355365 + STALKER4_I LTR Gypsy 3626 4456 -2441 8 673 898 86 35 58 chrUextra 11649409 11649581 -17355075 + DNAREP1_DM LINE Penelope 210 377 -217 8 673 239 184 289 0 chrUextra 11649579 11649655 -17355001 + DM176_I LTR Gypsy 4527 4624 -1796 8 673 1443 136 5 94 chrUextra 11649754 11650115 -17354541 + Gypsy8_LTR LTR Gypsy 1 304 0 8 673 335 62 0 0 chrUextra 11650089 11650137 -17354519 + Gypsy8_I LTR Gypsy 1 48 -4299 8 673 6344 3 1 1 chrUextra 11650237 11650983 -17353673 + FW_DM LINE Jockey 1316 2061 -2631 8 673 307 173 0 0 chrUextra 11651083 11651135 -17353521 - HETRP_DM Satellite Satellite -305 1567 1516 8 673 276 185 250 42 chrUextra 11651183 11651279 -17353377 - HETRP_DM Satellite Satellite -238 1634 1519 8 673 787 170 6 19 chrUextra 11651437 11651593 -17353063 - HETRP_DM Satellite Satellite -203 1669 1516 8 673 242 195 293 0 chrUextra 11651641 11651723 -17352933 - HETRP_DM Satellite Satellite -238 1634 1529 8 673 2263 75 18 41 chrUextra 11651932 11652673 -17351983 - DMSAT6 Satellite Satellite -151 723 1 8 673 3203 172 26 12 chrUextra 11652779 11653521 -17351135 + SAR_DM Satellite Satellite 267 1018 -454 8 673 3056 33 26 3 chrUextra 11653629 11654019 -17350637 - STALKER4_LTR LTR Gypsy -3 399 1 8 673 2484 9 11 14 chrUextra 11654019 11654367 -17350289 - STALKER4_I LTR Gypsy 0 6530 6184 8 673 27 29 0 0 chrUextra 11654501 11654535 -17350121 + AT_rich Low_complexity Low_complexity 1 34 0 8 673 21 0 0 0 chrUextra 11655067 11655088 -17349568 + AT_rich Low_complexity Low_complexity 1 21 0 8 673 687 32 0 50 chrUextra 11655113 11655213 -17349443 + NINJA_LTR LTR Pao 1 95 -222 8 673 2347 10 0 0 chrUextra 11655313 11655611 -17349045 - Invader2_I LTR Gypsy -4294 298 1 8 673 2319 4 0 0 chrUextra 11655611 11655877 -17348779 - Invader2_LTR LTR Gypsy 0 266 1 8 673 3220 52 2 0 chrUextra 11656159 11656585 -17348071 + R2_DM LINE R2 374 800 -2807 8 673 421 108 0 0 chrUextra 11656581 11656646 -17348010 + R2_DM LINE R2 1199 1263 -2344 8 673 2110 41 0 0 chrUextra 11656638 11656905 -17347751 + R2_DM LINE R2 796 1062 -2545 8 673 1157 15 0 0 chrUextra 11657147 11657282 -17347374 - 5S_DM RNA RNA 0 135 1 8 673 1157 15 0 0 chrUextra 11657520 11657655 -17347001 - 5S_DM RNA RNA 0 135 1 8 673 204 40 0 0 chrUextra 11659089 11659114 -17345542 + (TTG)n Simple_repeat Simple_repeat 2 26 0 8 673 978 47 8 0 chrUextra 11659314 11659441 -17345215 + PROTOP_B DNA P 74 201 -952 8 673 6410 0 3 3 chrUextra 11659543 11660289 -17344367 + SSU-rRNA_Dme rRNA rRNA 904 1649 -346 8 673 1554 11 0 0 chrUextra 11660635 11660815 -17343841 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 8 673 6360 5 1 0 chrUextra 11661235 11661981 -17342675 + R1_DM LINE R1 4346 5092 -264 8 673 1316 189 3 13 chrUextra 11662081 11662392 -17342264 + SAR_DM Satellite Satellite 408 715 -757 8 673 1669 184 10 12 chrUextra 11662405 11662817 -17341839 + SAR_DM Satellite Satellite 666 1076 -396 8 673 21 0 0 0 chrUextra 11663090 11663111 -17341545 + AT_rich Low_complexity Low_complexity 1 21 0 8 673 594 158 9 144 chrUextra 11663415 11663630 -17341026 - Gypsy2_I LTR Gypsy -5457 678 493 8 673 2789 0 0 0 chrUextra 11663773 11664092 -17340564 + R2_DM LINE R2 3289 3607 0 8 673 3691 5 0 0 chrUextra 11664093 11664519 -17340137 + LSU-rRNA_Dme rRNA rRNA 2578 3003 -897 8 673 2899 183 35 20 chrUextra 11664625 11665365 -17339291 - SAR_DM Satellite Satellite -255 1217 467 8 674 3766 0 0 0 chrUextra 11665658 11666086 -17338570 - ROO_LTR LTR Pao 0 428 1 8 674 1027 16 0 0 chrUextra 11666086 11666211 -17338445 - ROO_I LTR Pao 0 8256 8132 8 674 1944 306 16 15 chrUextra 11666331 11667057 -17337599 + MICROPIA_I LTR Gypsy 2407 3133 -1343 8 674 695 104 9 0 chrUextra 11667157 11667263 -17337393 - BS2 LINE Jockey -4601 120 14 8 674 36 0 0 0 chrUextra 11667515 11667551 -17337105 + AT_rich Low_complexity Low_complexity 1 36 0 8 674 192 40 0 0 chrUextra 11667669 11667694 -17336962 + (TAA)n Simple_repeat Simple_repeat 1 25 0 8 674 21 36 0 0 chrUextra 11667694 11667722 -17336934 + AT_rich Low_complexity Low_complexity 1 28 0 8 674 6200 1 0 34 chrUextra 11668003 11668749 -17335907 + LSU-rRNA_Dme rRNA rRNA 141 861 -3039 8 674 6113 43 0 1 chrUextra 11668849 11669593 -17335063 - R1_DM LINE R1 -3488 1868 1126 8 674 6692 4 0 1 chrUextra 11669695 11670441 -17334215 - DOC LINE Jockey -956 3769 3025 8 674 3504 18 2 0 chrUextra 11670541 11670942 -17333714 + PROTOP_A DNA P 704 1105 0 8 674 2021 61 70 0 chrUextra 11670942 11671287 -17333369 + PROTOP_B DNA P 420 754 -399 8 674 46 0 0 0 chrUextra 11671602 11671648 -17333008 + AT_rich Low_complexity Low_complexity 1 46 0 8 674 6388 7 4 3 chrUextra 11672233 11672979 -17331677 + Invader2_I LTR Gypsy 2260 3006 -1586 8 674 1668 20 0 5 chrUextra 11673079 11673284 -17331372 - NTS_DM Other Other -36 204 1 8 674 1824 21 17 17 chrUextra 11673284 11673524 -17331132 - NTS_DM Other Other 0 240 1 8 674 1835 17 17 17 chrUextra 11673524 11673764 -17330892 - NTS_DM Other Other 0 240 1 8 674 382 0 66 49 chrUextra 11673764 11673825 -17330831 - NTS_DM Other Other 0 240 179 8 674 511 33 0 0 chrUextra 11674008 11674069 -17330587 - DNAREP1_DM LINE Penelope -532 62 2 8 674 6510 4 3 1 chrUextra 11674771 11675517 -17329139 + R1_DM LINE R1 659 1405 -3951 8 674 2609 0 0 3 chrUextra 11675617 11675904 -17328752 - ROO_LTR LTR Pao -142 286 1 8 674 228 35 0 0 chrUextra 11675906 11675935 -17328721 + (GAGAA)n Simple_repeat Simple_repeat 4 32 0 8 674 1269 63 0 7 chrUextra 11675935 11676363 -17328293 + (ATAAG)n Simple_repeat Simple_repeat 1 425 0 8 674 249 128 0 0 chrUextra 11676465 11676504 -17328152 + ARS406_DM Unknown Unknown 91 129 -224 8 674 500 146 0 0 chrUextra 11676497 11676586 -17328070 - SAR_DM Satellite Satellite -841 631 543 8 674 2772 181 10 16 chrUextra 11676597 11677209 -17327447 - SAR_DM Satellite Satellite -396 1076 469 8 674 3201 40 46 23 chrUextra 11677385 11677823 -17326833 + PROTOP DNA P 1 448 -4032 8 674 1930 4 4 4 chrUextra 11677823 11678055 -17326601 - Copia_LTR LTR Copia 0 276 45 8 674 331 160 0 26 chrUextra 11678157 11678234 -17326422 + XDMR_DM Unknown Unknown 277 351 -9 8 674 3389 173 9 19 chrUextra 11678166 11678901 -17325755 - SAR_DM Satellite Satellite -361 1111 384 8 674 516 32 0 0 chrUextra 11679001 11679063 -17325593 - QUASIMODO_I LTR Gypsy -5998 62 1 8 674 4741 6 0 4 chrUextra 11679064 11679600 -17325056 - QUASIMODO_LTR LTR Gypsy -2 656 123 8 674 228 0 119 0 chrUextra 11679602 11679644 -17325012 + (TATAG)n Simple_repeat Simple_repeat 4 50 0 8 674 255 105 0 0 chrUextra 11679651 11679689 -17324967 - BARI1 DNA Tc1 -1710 40 3 8 674 737 11 0 0 chrUextra 11679657 11679747 -17324909 + IDEFIX_LTR LTR Gypsy 1 90 -504 8 674 766 0 0 0 chrUextra 11679847 11679933 -17324723 - NTS_DM Other Other -117 123 38 8 674 888 18 0 27 chrUextra 11679933 11680045 -17324611 - NTS_DM Other Other -107 133 25 8 674 22 56 0 0 chrUextra 11680071 11680107 -17324549 + AT_rich Low_complexity Low_complexity 1 36 0 8 674 269 125 0 0 chrUextra 11680120 11680160 -17324496 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 674 262 150 0 0 chrUextra 11680203 11680243 -17324413 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 674 262 150 0 0 chrUextra 11680295 11680335 -17324321 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 674 262 150 0 0 chrUextra 11680387 11680427 -17324229 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 8 674 22 56 0 0 chrUextra 11680432 11680468 -17324188 + AT_rich Low_complexity Low_complexity 1 36 0 8 674 487 0 0 0 chrUextra 11680540 11680593 -17324063 - LSU-rRNA_Dme rRNA rRNA 0 3900 3848 8 674 2752 0 0 0 chrUextra 11680708 11681016 -17323640 + LSU-rRNA_Dme rRNA rRNA 218 525 -3375 8 674 3843 5 0 0 chrUextra 11681012 11681439 -17323217 + LSU-rRNA_Dme rRNA rRNA 676 1102 -2798 8 674 4007 54 2 0 chrUextra 11681539 11682079 -17322577 - QUASIMODO_I LTR Gypsy -2352 3708 3168 8 674 1685 38 0 0 chrUextra 11682073 11682285 -17322371 - QUASIMODO_I LTR Gypsy -3158 2902 2691 8 674 369 183 66 80 chrUextra 11682389 11682526 -17322130 + Gypsy_LTR LTR Gypsy 328 462 -20 8 674 244 220 0 0 chrUextra 11682646 11682705 -17321951 + TIRANT_I LTR Gypsy 6974 7032 -660 8 674 1335 134 12 44 chrUextra 11682860 11683131 -17321525 + QUASIMODO_LTR LTR Gypsy 91 488 -170 8 674 3029 176 17 14 chrUextra 11683231 11683977 -17320679 + SAR_DM Satellite Satellite 195 1205 -267 8 674 1529 37 0 0 chrUextra 11684077 11684268 -17320388 + TART_B1 LINE telomeric 3462 3652 -7002 8 674 3731 102 34 20 chrUextra 11684265 11684823 -17319833 + TART_B1 LINE telomeric 4297 4862 -5792 8 674 2932 40 0 3 chrUextra 11684923 11685277 -17319379 + STALKER4_LTR LTR Gypsy 47 399 -3 8 674 3114 19 0 0 chrUextra 11685310 11685669 -17318987 - R1_DM LINE R1 -957 4399 4041 8 674 3083 180 13 18 chrUextra 11685770 11686515 -17318141 - SAR_DM Satellite Satellite -625 741 1 8 674 1318 75 11 0 chrUextra 11686615 11686803 -17317853 - DM297_I LTR Gypsy -3271 2896 2707 8 674 3443 97 6 19 chrUextra 11686832 11687358 -17317298 - DM297_I LTR Gypsy -3400 2767 2249 8 674 5209 83 21 13 chrUextra 11688307 11689053 -17315603 + TART_B1 LINE telomeric 2397 3148 -7506 8 674 3294 179 7 10 chrUextra 11689153 11689862 -17314794 - SAR_DM Satellite Satellite -571 901 195 8 674 728 108 31 0 chrUextra 11689770 11689899 -17314757 + ARS406_DM Unknown Unknown 1 133 -220 8 674 6543 4 3 0 chrUextra 11690845 11691591 -17313065 + DM176_I LTR Gypsy 3064 3811 -2609 8 674 2996 181 17 18 chrUextra 11691691 11692437 -17312219 - SAR_DM Satellite Satellite -620 744 1 8 674 21 89 0 0 chrUextra 11693194 11693250 -17311406 + AT_rich Low_complexity Low_complexity 1 56 0 8 674 1643 25 5 0 chrUextra 11693382 11693586 -17311070 - NTS_DM Other Other -35 205 1 8 674 1835 17 17 17 chrUextra 11693586 11693826 -17310830 - NTS_DM Other Other 0 240 1 8 674 1813 21 17 17 chrUextra 11693826 11694066 -17310590 - NTS_DM Other Other 0 240 1 8 674 382 0 66 49 chrUextra 11694066 11694127 -17310529 - NTS_DM Other Other 0 240 179 8 674 386 283 0 0 chrUextra 11694866 11694972 -17309684 + Copia2_I LTR Copia 567 672 -3490 8 674 2996 198 17 24 chrUextra 11695072 11695815 -17308841 + SAR_DM Satellite Satellite 1 737 -203 8 674 21 89 0 0 chrUextra 11696110 11696166 -17308490 + AT_rich Low_complexity Low_complexity 1 56 0 8 674 21 57 0 0 chrUextra 11696204 11696239 -17308417 + AT_rich Low_complexity Low_complexity 1 35 0 8 674 1877 211 20 101 chrUextra 11696762 11697507 -17307149 + HETA LINE telomeric 3390 4074 -2007 8 674 6613 1 1 0 chrUextra 11697607 11698352 -17306304 + DM176_I LTR Gypsy 2580 3325 -3095 8 674 514 119 36 0 chrUextra 11698503 11698587 -17306069 - NTS_DM Other Other -150 90 4 8 674 1355 6 0 18 chrUextra 11698698 11698863 -17305793 - NTS_DM Other Other -78 162 1 8 674 1926 4 17 13 chrUextra 11698863 11699102 -17305554 - NTS_DM Other Other 0 240 1 8 674 665 0 42 32 chrUextra 11699102 11699197 -17305459 - NTS_DM Other Other 0 240 145 8 674 6669 3 1 3 chrUextra 11699297 11700042 -17304614 - LSU-rRNA_Dme rRNA rRNA -2399 1501 758 8 674 6379 24 24 0 chrUextra 11700142 11700887 -17303769 - R1_DM LINE R1 -2748 2608 1846 8 674 2328 192 39 4 chrUextra 11700987 11701731 -17302925 - SAR_DM Satellite Satellite -707 769 1 8 674 5085 55 7 15 chrUextra 11701832 11702577 -17302079 - I_DM LINE I -4578 1653 915 8 674 6623 11 0 0 chrUextra 11702677 11703422 -17301234 - R1_DM LINE R1 -145 5211 4467 8 674 1182 13 20 13 chrUextra 11703522 11703673 -17300983 - DM297_LTR LTR Gypsy -262 152 1 8 674 2780 215 20 13 chrUextra 11704367 11705112 -17299544 - SAR_DM Satellite Satellite -277 1195 446 8 674 6544 3 1 0 chrUextra 11705212 11705957 -17298699 + DOC LINE Jockey 583 1328 -3397 8 674 3426 181 8 8 chrUextra 11706057 11706788 -17297868 - SAR_DM Satellite Satellite -470 1002 272 8 674 1792 189 59 27 chrUextra 11706902 11707515 -17297141 - SAR_DM Satellite Satellite -865 632 1 8 674 853 79 0 0 chrUextra 11707520 11707647 -17297009 + ARS406_DM Unknown Unknown 4 130 -223 8 674 1497 169 21 27 chrUextra 11707758 11708489 -17296167 + SAR_DM Satellite Satellite 1 726 -1044 8 674 6161 8 0 23 chrUextra 11708592 11709337 -17295319 - STALKER4_I LTR Gypsy -4588 1942 1215 8 674 5805 32 1 0 chrUextra 11709437 11710134 -17294522 - FW_DM LINE Jockey -3937 755 58 8 674 252 57 0 28 chrUextra 11710137 11710173 -17294483 + BATUMI_I LTR Pao 6717 6751 -1212 8 674 1362 297 26 19 chrUextra 11710497 11711025 -17293631 + Gypsy5_I LTR Gypsy 2189 2720 -3789 8 674 6442 19 1 0 chrUextra 11711127 11711872 -17292784 + FW_DM LINE Jockey 2390 3135 -1557 8 674 864 26 17 0 chrUextra 11711972 11712089 -17292567 - DOC5_DM LINE Jockey -585 4097 3979 8 674 613 134 43 17 chrUextra 11712108 11712308 -17292348 - DMCR1A LINE CR1 -4010 460 365 8 674 246 191 0 0 chrUextra 11712375 11712422 -17292234 + DMCR1A LINE CR1 744 790 -3680 8 674 270 208 0 0 chrUextra 11712554 11712607 -17292049 + NOMAD_I LTR Gypsy 6520 6572 0 8 674 6570 1 0 0 chrUextra 11712817 11713562 -17291094 - STALKER4_I LTR Gypsy -2609 3921 3177 8 674 6422 11 0 0 chrUextra 11713662 11714407 -17290249 - STALKER4_I LTR Gypsy -4606 1924 1180 8 674 3116 189 15 21 chrUextra 11714507 11715252 -17289404 - SAR_DM Satellite Satellite -300 1172 433 8 674 5796 16 20 20 chrUextra 11715352 11716097 -17288559 - ROO_I LTR Pao -7393 863 119 8 674 6681 5 1 0 chrUextra 11716197 11716942 -17287714 - R1_DM LINE R1 -44 5312 4567 8 674 5700 36 97 0 chrUextra 11717042 11717787 -17286869 + IDEFIX_I LTR Gypsy 633 1449 -4179 8 674 5820 21 0 40 chrUextra 11717887 11718632 -17286024 - MDG3_I LTR Gypsy -3082 1904 1190 8 674 3796 2 2 0 chrUextra 11718732 11719151 -17285505 + LSU-rRNA_Dme rRNA rRNA 3481 3900 0 8 674 22 56 0 0 chrUextra 11719223 11719259 -17285397 + AT_rich Low_complexity Low_complexity 1 36 0 8 674 262 150 0 0 chrUextra 11719264 11719304 -17285352 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 674 262 150 0 0 chrUextra 11719356 11719396 -17285260 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 674 251 132 0 0 chrUextra 11719439 11719477 -17285179 + LSU-rRNA_Dme rRNA rRNA 2581 2618 -1282 8 674 6030 34 50 4 chrUextra 11720422 11721167 -17283489 + Baggins1 LINE LOA 894 1672 -3781 8 674 6590 7 0 0 chrUextra 11721267 11722012 -17282644 + DMRT1B LINE R1 681 1425 -3758 8 674 2821 5 196 9 chrUextra 11722112 11722530 -17282126 + BLOOD_I LTR Gypsy 6118 6613 0 8 674 1862 43 8 45 chrUextra 11722530 11722796 -17281860 + BLOOD_LTR LTR Gypsy 1 256 -143 8 674 618 282 68 8 chrUextra 11722965 11723201 -17281455 + Invader1_I LTR Gypsy 1846 2095 -1091 8 674 556 230 7 7 chrUextra 11723201 11723350 -17281306 + Invader1_I LTR Gypsy 2416 2564 -622 8 674 4013 0 0 0 chrUextra 11723802 11724256 -17280400 - HOBO DNA hAT -2562 454 1 8 674 6234 20 0 0 chrUextra 11724647 11725392 -17279264 + Gypsy4_I LTR Gypsy 3756 4500 -1788 8 674 2784 23 0 6 chrUextra 11725887 11726237 -17278419 - CIRCE LINE Composite -1376 4980 4633 8 674 6342 3 3 3 chrUextra 11726337 11727082 -17277574 + LSU-rRNA_Dme rRNA rRNA 908 1652 -2248 8 674 27 29 0 0 chrUextra 11727272 11727306 -17277350 + AT_rich Low_complexity Low_complexity 1 34 0 8 674 620 93 41 0 chrUextra 11727545 11727642 -17277014 + Baggins1 LINE LOA 4727 4827 -626 8 674 765 97 227 0 chrUextra 11727635 11727789 -17276867 - FB4_DM DNA Tc1 -3898 191 3 8 674 4871 109 28 0 chrUextra 11728027 11728771 -17275885 - Gypsy12_I LTR Gypsy -1522 4024 3260 8 674 2599 7 0 0 chrUextra 11728872 11729174 -17275482 + MAX_LTR LTR Pao 20 321 0 8 674 841 287 64 17 chrUextra 11729174 11729599 -17275057 - MICROPIA_I LTR Gypsy -1702 2774 2350 8 674 6374 0 30 0 chrUextra 11729717 11730462 -17274194 + STALKER4_I LTR Gypsy 3713 4479 -2051 8 674 5761 20 1 15 chrUextra 11730562 11731307 -17273349 + ROO_I LTR Pao 2846 3580 -4676 8 674 3782 2 0 0 chrUextra 11731407 11731838 -17272818 - SSU-rRNA_Dme rRNA rRNA -1564 431 1 8 674 32 0 0 0 chrUextra 11731970 11732002 -17272654 + AT_rich Low_complexity Low_complexity 1 32 0 8 674 6128 3 1 1 chrUextra 11732255 11732997 -17271659 - ROO_I LTR Pao -4752 3504 2763 8 674 6380 9 4 0 chrUextra 11733097 11733842 -17270814 - BS LINE Jockey -1518 3608 2861 8 674 239 122 41 0 chrUextra 11733942 11733991 -17270665 + ARS406_DM Unknown Unknown 139 189 -164 8 674 2881 181 8 9 chrUextra 11733949 11734687 -17269969 - SAR_DM Satellite Satellite -262 1210 195 8 674 3022 189 16 25 chrUextra 11734789 11735527 -17269129 - SAR_DM Satellite Satellite -587 731 1 8 674 1554 25 75 0 chrUextra 11736178 11736377 -17268279 + PROTOP_B DNA P 1 214 -939 8 674 2974 184 52 18 chrUextra 11736477 11737222 -17267434 + SAR_DM Satellite Satellite 1 770 -208 8 674 37 39 0 0 chrUextra 11737497 11737548 -17267108 + AT_rich Low_complexity Low_complexity 1 51 0 8 674 22 35 0 0 chrUextra 11737649 11737678 -17266978 + AT_rich Low_complexity Low_complexity 1 29 0 8 674 21 57 0 0 chrUextra 11737875 11737910 -17266746 + AT_rich Low_complexity Low_complexity 1 35 0 8 674 1302 13 0 0 chrUextra 11737910 11738067 -17266589 + ALUII_DM Unknown Unknown 1 157 -83 8 674 257 287 58 84 chrUextra 11738195 11738385 -17266271 + Invader1_LTR LTR Gypsy 184 368 -55 8 674 4627 9 0 0 chrUextra 11739012 11739566 -17265090 + IDEFIX_I LTR Gypsy 2134 2687 -2941 8 674 1444 37 0 16 chrUextra 11739560 11739753 -17264903 + IDEFIX_I LTR Gypsy 2814 3003 -2625 8 674 1170 130 0 5 chrUextra 11739857 11740058 -17264598 + ROVER-I_DM LTR Gypsy 5109 5308 -1276 8 674 2072 171 25 10 chrUextra 11740093 11740602 -17264054 + ROVER-I_DM LTR Gypsy 5990 6506 -78 8 674 1653 30 0 0 chrUextra 11740702 11740905 -17263751 - PROTOP_A DNA P -902 203 1 8 674 2040 101 68 3 chrUextra 11740905 11741272 -17263384 - S2_DM DNA Tc1 -1296 439 49 8 674 6476 3 0 0 chrUextra 11741547 11742292 -17262364 - LSU-rRNA_Dme rRNA rRNA -1047 2853 2109 8 674 326 0 0 0 chrUextra 11742392 11742430 -17262226 - R1_DM LINE R1 -2088 3268 3231 8 674 6162 1 0 1 chrUextra 11742429 11743137 -17261519 - LSU-rRNA_Dme rRNA rRNA -1246 2654 1948 8 674 6092 21 18 0 chrUextra 11743237 11743981 -17260675 + R1_DM LINE R1 4000 4756 -600 8 674 3500 0 0 2 chrUextra 11744085 11744487 -17260169 + LSU-rRNA_Dme rRNA rRNA 3500 3900 0 8 674 22 56 0 0 chrUextra 11744559 11744595 -17260061 + AT_rich Low_complexity Low_complexity 1 36 0 8 674 246 150 0 0 chrUextra 11744600 11744640 -17260016 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 674 246 150 0 0 chrUextra 11744692 11744732 -17259924 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 8 674 1255 67 0 0 chrUextra 11744934 11745099 -17259557 + CIRCE LINE Composite 2735 2899 -3457 8 674 2263 87 43 79 chrUextra 11745099 11745506 -17259150 - Gypsy6A_LTR LTR Gypsy 0 420 1 8 674 1339 30 0 0 chrUextra 11745506 11745672 -17258984 - Gypsy3_I LTR Gypsy 0 6177 6012 8 674 4660 65 24 17 chrUextra 11745772 11746517 -17258139 + TART LINE telomeric 1 651 -13826 8 674 659 180 13 51 chrUextra 11746778 11746936 -17257720 + HETRP_DM Satellite Satellite 1518 1669 -203 8 674 699 179 6 38 chrUextra 11747080 11747237 -17257419 + HETRP_DM Satellite Satellite 1518 1669 -203 8 674 6097 7 4 0 chrUextra 11747462 11748207 -17256449 + DM297_I LTR Gypsy 1581 2328 -3839 8 674 1083 285 32 59 chrUextra 11749249 11749896 -17254760 - Invader4_I LTR Gypsy -3052 1047 422 8 674 2683 192 25 8 chrUextra 11750001 11750742 -17253914 - SAR_DM Satellite Satellite -396 753 1 8 674 3540 40 130 1 chrUextra 11750842 11751587 -17253069 - R1_DM LINE R1 -3779 1577 737 8 674 382 209 26 43 chrUextra 11752317 11752432 -17252224 + Gypsy_LTR LTR Gypsy 1 113 -369 8 674 6451 4 0 0 chrUextra 11753377 11754122 -17250534 + FW_DM LINE Jockey 3572 4316 -376 8 674 6124 14 0 4 chrUextra 11755067 11755812 -17248844 - MICROPIA_I LTR Gypsy -56 4420 3679 8 674 349 269 0 0 chrUextra 11756117 11756225 -17248431 + Gypsy7_I LTR Gypsy 1560 1667 -3317 8 674 3058 45 2 17 chrUextra 11756253 11756657 -17247999 - G5A_DM LINE Jockey -3 2838 2441 8 674 767 0 0 0 chrUextra 11756757 11756852 -17247804 + ROO_I LTR Pao 7911 8005 -251 8 674 2649 13 9 0 chrUextra 11757602 11757918 -17246738 + Invader1_LTR LTR Gypsy 105 423 0 8 674 487 240 0 16 chrUextra 11757935 11758058 -17246598 - HETRP_DM Satellite Satellite -203 1669 1549 8 674 426 20 0 0 chrUextra 11758058 11758109 -17246547 + (TC)n Simple_repeat Simple_repeat 2 52 0 8 674 430 208 9 19 chrUextra 11758239 11758347 -17246309 - HETRP_DM Satellite Satellite -203 1669 1563 8 674 23 0 0 0 chrUextra 11758472 11758495 -17246161 + AT_rich Low_complexity Low_complexity 1 23 0 8 674 593 79 11 0 chrUextra 11758495 11758584 -17246072 - BS3_DM LINE Jockey -1 1789 1700 8 674 300 132 12 24 chrUextra 11759051 11759136 -17245520 + A-rich Low_complexity Low_complexity 1 84 0 8 674 2487 180 12 19 chrUextra 11759292 11759906 -17244750 - SAR_DM Satellite Satellite -372 739 38 8 674 742 60 0 0 chrUextra 11759906 11760006 -17244650 + ARS406_DM Unknown Unknown 90 189 -164 8 674 2487 180 12 19 chrUextra 11760006 11760037 -17244619 - SAR_DM Satellite Satellite -372 37 1 8 674 1038 190 0 0 chrUextra 11760137 11760337 -17244319 + Gypsy3_I LTR Gypsy 5957 6156 -21 8 674 842 198 119 89 chrUextra 11760340 11760711 -17243945 + Gypsy3_LTR LTR Gypsy 1 382 -16 8 674 5541 24 46 1 chrUextra 11760982 11761727 -17242929 - R1_DM LINE R1 -2637 2719 1942 8 674 6298 7 0 3 chrUextra 11761828 11762572 -17242084 + FW_DM LINE Jockey 3758 4499 -193 8 674 6391 0 0 4 chrUextra 11762672 11763417 -17241239 + G2_DM LINE Jockey 802 1543 -1559 8 674 6189 8 0 5 chrUextra 11763517 11764262 -17240394 + FW_DM LINE Jockey 1224 1964 -2728 8 674 5987 24 7 4 chrUextra 11764362 11765107 -17239549 + CIRCE LINE Composite 3040 3786 -2570 8 674 6193 5 3 4 chrUextra 11765207 11765952 -17238704 - R1_DM LINE R1 -1413 3943 3200 8 674 6032 12 0 0 chrUextra 11766054 11766797 -17237859 + QUASIMODO_I LTR Gypsy 1016 1758 -4302 8 674 6136 8 0 0 chrUextra 11766897 11767642 -17237014 + QUASIMODO_I LTR Gypsy 1097 1841 -4219 8 674 1847 62 292 2 chrUextra 11767743 11768195 -17236461 + PROTOP_B DNA P 229 856 -297 8 674 1980 92 0 3 chrUextra 11768203 11768487 -17236169 - Jockey2 LINE Jockey -1608 1820 1538 8 674 1236 73 17 6 chrUextra 11768587 11768765 -17235891 + Gypsy10_LTR LTR Gypsy 185 364 0 8 674 3049 86 34 53 chrUextra 11768765 11769332 -17235324 + Gypsy10_I LTR Gypsy 1 556 -4722 8 674 425 326 5 5 chrUextra 11769972 11770166 -17234490 + GTWIN_I LTR Gypsy 725 918 -5503 8 674 1914 177 18 7 chrUextra 11770279 11770723 -17233933 - SAR_DM Satellite Satellite -731 741 293 8 674 1146 195 21 3 chrUextra 11770739 11770819 -17233837 - SAR_DM Satellite Satellite -748 724 497 8 674 1201 76 27 0 chrUextra 11770819 11771003 -17233653 + ARS406_DM Unknown Unknown 1 189 -164 8 674 1146 195 21 3 chrUextra 11771003 11771022 -17233634 - SAR_DM Satellite Satellite -748 496 437 8 674 6119 4 28 0 chrUextra 11771122 11771867 -17232789 + STALKER4_I LTR Gypsy 4792 5557 -973 8 674 6241 3 0 3 chrUextra 11771967 11772712 -17231944 + LSU-rRNA_Dme rRNA rRNA 341 1083 -2817 8 674 4724 4 0 0 chrUextra 11772812 11773371 -17231285 + DOC LINE Jockey 4163 4721 -4 8 674 730 231 0 0 chrUextra 11773371 11773553 -17231103 + ROVER-I_DM LTR Gypsy 2592 2773 -3811 8 674 5446 35 3 3 chrUextra 11773717 11774402 -17230254 - R1_DM LINE R1 0 5356 4672 8 674 5745 18 4 7 chrUextra 11774502 11775231 -17229425 - STALKER4_I LTR Gypsy -4747 1783 1057 8 674 2405 102 24 39 chrUextra 11775347 11776092 -17228564 + DMSAT6 Satellite Satellite 1 734 -97 9 674 2812 181 16 18 chrUextra 11776192 11776937 -17227719 + SAR_DM Satellite Satellite 1 743 -291 9 674 6659 16 1 1 chrUextra 11777037 11777782 -17226874 - R2_DM LINE R2 -446 3161 2417 9 674 6399 36 3 0 chrUextra 11777882 11778627 -17226029 + R1_DM LINE R1 4176 4922 -434 9 674 3627 22 0 5 chrUextra 11778727 11779138 -17225518 + R1_DM LINE R1 4948 5356 0 9 674 2283 80 6 6 chrUextra 11779159 11779472 -17225184 + R1_DM LINE R1 23 335 -5021 9 674 782 94 0 0 chrUextra 11779572 11779689 -17224967 - ARS406_DM Unknown Unknown -206 147 31 9 674 2043 186 63 20 chrUextra 11779675 11780317 -17224339 + SAR_DM Satellite Satellite 1 669 -774 9 674 6951 3 0 0 chrUextra 11780418 11781162 -17223494 + NOMAD_I LTR Gypsy 2794 3537 -3035 9 674 540 188 0 0 chrUextra 11781262 11781400 -17223256 + (AATAG)n Simple_repeat Simple_repeat 2 139 0 9 674 2479 127 24 31 chrUextra 11782110 11782851 -17221805 + DMSAT6 Satellite Satellite 1 735 -74 9 674 3329 168 22 27 chrUextra 11782952 11783694 -17220962 + SAR_DM Satellite Satellite 444 1181 -291 9 674 3244 123 79 43 chrUextra 11783797 11784542 -17220114 + STALKER4_I LTR Gypsy 410 1232 -5298 9 674 5741 3 2 2 chrUextra 11784642 11785264 -17219392 + LSU-rRNA_Dme rRNA rRNA 3279 3900 0 9 674 29 28 0 0 chrUextra 11785336 11785372 -17219284 + AT_rich Low_complexity Low_complexity 1 36 0 9 674 340 318 44 44 chrUextra 11785487 11785780 -17218876 - GTWIN_I LTR Gypsy -3809 2612 2320 9 674 385 355 21 54 chrUextra 11786682 11787077 -17217579 - Gypsy6_I LTR Gypsy -5228 1784 1351 9 674 228 86 0 0 chrUextra 11787197 11787232 -17217424 + (TTA)n Simple_repeat Simple_repeat 2 36 0 9 674 5367 22 14 17 chrUextra 11787232 11787857 -17216799 - ACCORD2_I LTR Gypsy -6069 1143 520 9 674 467 16 0 15 chrUextra 11787856 11787921 -17216735 - ACCORD2_I LTR Gypsy -6814 398 335 9 674 6824 5 3 0 chrUextra 11788021 11788765 -17215891 - DIVER_I LTR Pao -2482 3161 2416 9 674 6623 12 1 0 chrUextra 11788865 11789609 -17215047 + DMRT1B LINE R1 1025 1769 -3414 9 674 1042 25 0 8 chrUextra 11789709 11789830 -17214826 + LSU-rRNA_Dme rRNA rRNA 2536 2655 -1245 9 674 5057 7 0 0 chrUextra 11789830 11790382 -17214274 + R1_DM LINE R1 4805 5356 0 9 674 662 14 0 0 chrUextra 11790380 11790453 -17214203 + LSU-rRNA_Dme rRNA rRNA 2640 2712 -1188 9 674 6889 5 0 0 chrUextra 11790553 11791297 -17213359 + R2_DM LINE R2 2125 2868 -739 9 674 2763 213 24 13 chrUextra 11791397 11792141 -17212515 - SAR_DM Satellite Satellite -599 752 1 9 674 656 155 0 10 chrUextra 11792241 11792345 -17212311 - HETA LINE telomeric -1431 4650 4548 9 674 1357 148 129 27 chrUextra 11792335 11792678 -17211978 + TART LINE telomeric 9260 9604 -4873 9 674 988 191 36 88 chrUextra 11792678 11792983 -17211673 + HETA LINE telomeric 5334 5622 -459 9 674 1605 11 0 0 chrUextra 11793085 11793273 -17211383 + ROO_I LTR Pao 3886 4073 -4183 9 674 5124 2 0 0 chrUextra 11793264 11793829 -17210827 + ROO_I LTR Pao 4206 4770 -3486 9 674 6738 7 1 0 chrUextra 11793929 11794673 -17209983 + MDG1_I LTR Gypsy 3454 4198 -2398 9 674 6644 11 1 3 chrUextra 11794773 11795517 -17209139 - R1_DM LINE R1 -942 4414 3672 9 674 5540 37 11 18 chrUextra 11795617 11796361 -17208295 + IDEFIX_I LTR Gypsy 4742 5480 -148 9 84 2014 5 0 0 chrUextra 11796461 11796680 -17207976 - FW_DM LINE Jockey -4473 219 1 9 675 2460 166 31 14 chrUextra 11796687 11797205 -17207451 + SAR_DM Satellite Satellite 273 799 -673 9 675 532 119 36 0 chrUextra 11797516 11797600 -17207056 - NTS_DM Other Other -150 90 4 9 675 1388 6 0 18 chrUextra 11797710 11797875 -17206781 - NTS_DM Other Other -78 162 1 9 675 1303 12 23 17 chrUextra 11797875 11798049 -17206607 - NTS_DM Other Other 0 240 66 9 675 6703 5 0 0 chrUextra 11798149 11798893 -17205763 + DMRT1A LINE R1 694 1437 -3746 9 675 279 147 51 139 chrUextra 11798993 11799072 -17205584 + Copia_I LTR Copia 4442 4513 -80 9 675 1252 170 110 25 chrUextra 11799418 11799737 -17204919 - TAHRE LINE telomeric -973 9490 9145 9 675 1439 226 44 2 chrUextra 11799846 11800262 -17204394 - Gypsy10_I LTR Gypsy -2599 2679 1895 9 675 2710 19 3 9 chrUextra 11800259 11800577 -17204079 + CIRCE LINE Composite 3515 3830 -2526 9 675 6661 4 4 4 chrUextra 11800682 11801425 -17203231 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1049 9 675 1367 54 6 0 chrUextra 11801525 11801692 -17202964 - DOC3_DM LINE Jockey -2053 2687 2520 9 675 4571 28 9 6 chrUextra 11801678 11802215 -17202441 - DOC3_DM LINE Jockey -2439 2301 1763 9 675 592 14 0 0 chrUextra 11802200 11802269 -17202387 - DMRT1B LINE R1 0 5183 5115 9 675 6933 1 1 0 chrUextra 11802369 11803113 -17201543 - DIVER_I LTR Pao -4031 1612 868 9 675 6443 28 3 0 chrUextra 11803213 11803957 -17200699 - R1_DM LINE R1 -224 5132 4387 9 675 6924 0 0 0 chrUextra 11804901 11805645 -17199011 - DM1731_I LTR Copia -999 2977 2234 9 675 6883 0 0 0 chrUextra 11805745 11806489 -17198167 + BS2 LINE Jockey 2634 3377 -1344 9 675 762 251 62 0 chrUextra 11806589 11806800 -17197856 - QUASIMODO_I LTR Gypsy -4022 2038 1815 9 675 269 305 83 41 chrUextra 11806939 11807301 -17197355 - QUASIMODO_I LTR Gypsy -4569 1491 1115 9 675 3762 96 42 4 chrUextra 11808277 11809021 -17195635 - TART LINE telomeric -13015 1462 655 9 675 3163 117 65 89 chrUextra 11809121 11809865 -17194791 + PROTOP_B DNA P 266 991 -162 9 675 6605 8 0 0 chrUextra 11809965 11810709 -17193947 + MDG1_I LTR Gypsy 2734 3477 -3119 9 675 6555 15 1 0 chrUextra 11810809 11811553 -17193103 - STALKER4_I LTR Gypsy -4263 2267 1523 9 675 6577 21 0 0 chrUextra 11811653 11812397 -17192259 - R1_DM LINE R1 -783 4573 3830 9 675 5623 10 0 0 chrUextra 11812624 11813241 -17191415 + Gypsy4_I LTR Gypsy 374 990 -5298 9 675 754 12 0 0 chrUextra 11813341 11813423 -17191233 - NTS_DM Other Other -158 82 1 9 675 1858 21 17 17 chrUextra 11813423 11813663 -17190993 - NTS_DM Other Other 0 240 1 9 675 1880 17 17 17 chrUextra 11813663 11813903 -17190753 - NTS_DM Other Other 0 240 1 9 675 1252 28 22 22 chrUextra 11813903 11814085 -17190571 - NTS_DM Other Other 0 240 59 9 675 2149 21 0 0 chrUextra 11814185 11814425 -17190231 - FW_DM LINE Jockey -2264 2428 2189 9 675 790 74 83 0 chrUextra 11814411 11814519 -17190137 + TART LINE telomeric 3913 4029 -10448 9 675 1772 157 58 55 chrUextra 11814490 11814929 -17189727 + TART LINE telomeric 4698 5043 -9434 9 675 1407 29 0 6 chrUextra 11815029 11815204 -17189452 - NTS_DM Other Other -66 174 1 9 675 1540 15 20 20 chrUextra 11815204 11815407 -17189249 - NTS_DM Other Other 0 240 38 9 675 928 9 0 27 chrUextra 11815407 11815519 -17189137 - NTS_DM Other Other -107 133 25 9 675 1309 24 0 6 chrUextra 11815571 11815736 -17188920 - NTS_DM Other Other -39 201 38 9 675 268 0 0 0 chrUextra 11815736 11815773 -17188883 - NTS_DM Other Other -107 133 97 9 675 6517 20 9 0 chrUextra 11815873 11816617 -17188039 - FW_DM LINE Jockey -1612 3080 2330 9 675 6700 11 0 5 chrUextra 11816717 11817461 -17187195 + CIRCE LINE Composite 3604 4343 -2013 9 675 266 196 0 19 chrUextra 11817679 11817731 -17186925 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 675 266 196 0 19 chrUextra 11817771 11817823 -17186833 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 675 266 196 0 19 chrUextra 11817863 11817915 -17186741 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 675 277 176 0 19 chrUextra 11817946 11817998 -17186658 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 675 22 56 0 0 chrUextra 11818011 11818047 -17186609 + AT_rich Low_complexity Low_complexity 1 36 0 9 675 928 9 0 27 chrUextra 11818073 11818185 -17186471 + NTS_DM Other Other 25 133 -107 9 675 949 17 0 8 chrUextra 11818185 11818303 -17186353 + NTS_DM Other Other 38 154 -86 9 675 258 30 30 0 chrUextra 11818405 11818438 -17186218 - NTS_DM Other Other -206 34 1 9 675 1507 20 20 20 chrUextra 11818438 11818641 -17186015 - NTS_DM Other Other 0 240 38 9 675 870 0 0 0 chrUextra 11818641 11818737 -17185919 - NTS_DM Other Other -107 133 38 9 675 890 9 9 27 chrUextra 11818737 11818848 -17185808 - NTS_DM Other Other -107 133 25 9 675 21 57 0 0 chrUextra 11818874 11818909 -17185747 + AT_rich Low_complexity Low_complexity 1 35 0 9 675 1332 18 0 6 chrUextra 11818909 11819074 -17185582 - NTS_DM Other Other -39 201 38 9 675 613 13 0 0 chrUextra 11819074 11819149 -17185507 - NTS_DM Other Other -107 133 59 9 675 6575 30 0 0 chrUextra 11819249 11819993 -17184663 + MAX_I LTR Pao 5418 6161 -1753 9 675 430 324 34 38 chrUextra 11821030 11821426 -17183230 + Gypsy3_I LTR Gypsy 1179 1784 -5228 9 675 5103 38 3 8 chrUextra 11822625 11823242 -17181414 + DMRT1B LINE R1 4570 5183 0 9 675 1078 34 20 7 chrUextra 11823222 11823369 -17181287 + DOC3_DM LINE Jockey 1751 1899 -2841 9 675 3117 74 17 16 chrUextra 11823469 11823984 -17180672 - HETA LINE telomeric -5444 637 1 9 675 2010 4 4 0 chrUextra 11823981 11824213 -17180443 - TAHRE LINE telomeric -11 10452 10220 9 675 6934 1 1 0 chrUextra 11824313 11825057 -17179599 + R2_DM LINE R2 2794 3538 -69 9 675 2838 156 75 24 chrUextra 11825293 11825877 -17178779 + Stalker2_I LTR Gypsy 242 855 -6547 9 675 2468 276 9 3 chrUextra 11826001 11826742 -17177914 + ROVER-I_DM LTR Gypsy 3413 4158 -2426 9 675 2990 123 6 8 chrUextra 11826845 11827589 -17177067 - BATUMI_I LTR Pao -3151 4763 3975 9 675 6373 12 51 0 chrUextra 11827689 11828433 -17176223 + STALKER4_I LTR Gypsy 1951 2732 -3798 9 675 2925 213 26 15 chrUextra 11828533 11829275 -17175381 + SAR_DM Satellite Satellite 1 750 -203 9 675 6185 30 1 11 chrUextra 11829377 11830121 -17174535 + BATUMI_I LTR Pao 2780 3516 -4447 9 675 6806 3 0 0 chrUextra 11830221 11830965 -17173691 - FW_DM LINE Jockey -2926 1766 1023 9 675 6831 4 0 0 chrUextra 11831065 11831809 -17172847 - R1_DM LINE R1 -2333 3023 2280 9 675 6329 44 0 0 chrUextra 11831909 11832653 -17172003 - BATUMI_I LTR Pao -2818 5145 4402 9 675 195 42 0 0 chrUextra 11833391 11833415 -17171241 + (TC)n Simple_repeat Simple_repeat 1 24 0 9 675 2735 3 3 0 chrUextra 11833597 11833894 -17170762 - SSU-rRNA_Dme rRNA rRNA -1697 298 1 9 675 32 0 0 0 chrUextra 11834026 11834058 -17170598 + AT_rich Low_complexity Low_complexity 1 32 0 9 675 6423 25 0 0 chrUextra 11834441 11835185 -17169471 - MDG1_I LTR Gypsy -3099 3497 2754 9 675 6689 8 0 3 chrUextra 11835285 11836029 -17168627 + R1_DM LINE R1 4144 4885 -471 9 675 1901 5 18 13 chrUextra 11836129 11836358 -17168298 - NTS_DM Other Other -10 230 1 9 675 1878 21 17 17 chrUextra 11836358 11836598 -17168058 - NTS_DM Other Other 0 240 1 9 675 1862 17 21 17 chrUextra 11836598 11836837 -17167819 - NTS_DM Other Other 0 240 1 9 675 1005 435 4 16 chrUextra 11836837 11837080 -17167576 - NTS_DM Other Other 0 240 1 9 675 1536 30 10 15 chrUextra 11837080 11837284 -17167372 - NTS_DM Other Other 0 240 38 9 675 936 9 0 27 chrUextra 11837284 11837396 -17167260 - NTS_DM Other Other -107 133 25 9 675 1270 24 0 18 chrUextra 11837448 11837615 -17167041 - NTS_DM Other Other -39 201 38 9 675 929 0 0 0 chrUextra 11837615 11837717 -17166939 - NTS_DM Other Other -107 133 32 9 675 27 29 0 0 chrUextra 11838062 11838096 -17166560 + AT_rich Low_complexity Low_complexity 1 34 0 9 675 265 91 0 0 chrUextra 11838335 11838368 -17166288 + Baggins1 LINE LOA 4727 4759 -694 9 675 769 103 241 0 chrUextra 11838373 11838518 -17166138 - FB4_DM DNA Tc1 -3907 182 3 9 675 6137 35 9 3 chrUextra 11838661 11839405 -17165251 + MDG1_I LTR Gypsy 1273 2021 -4575 9 675 402 257 114 96 chrUextra 11839929 11840209 -17164447 - Invader1_LTR LTR Gypsy -55 368 84 9 675 6746 1 1 5 chrUextra 11840349 11841093 -17163563 - LSU-rRNA_Dme rRNA rRNA -2552 1348 608 9 675 1156 25 251 0 chrUextra 11841194 11841357 -17163299 - R1_DM LINE R1 -1806 3550 3347 9 675 4888 41 2 0 chrUextra 11841353 11841937 -17162719 - R1_DM LINE R1 -2696 2660 2076 9 675 6658 11 0 0 chrUextra 11842037 11842781 -17161875 - DOC2_DM LINE Jockey -1291 3502 2759 9 675 3393 177 15 21 chrUextra 11842881 11843625 -17161031 - SAR_DM Satellite Satellite -321 1151 413 9 675 6721 3 0 1 chrUextra 11843725 11844469 -17160187 + R1_DM LINE R1 2520 3262 -2094 9 675 339 65 0 0 chrUextra 11844570 11844616 -17160040 + (TTCTC)n Simple_repeat Simple_repeat 3 48 0 9 675 786 262 22 18 chrUextra 11845444 11845720 -17158936 - QUASIMODO_I LTR Gypsy -257 5803 5527 9 675 2323 106 64 11 chrUextra 11845712 11846151 -17158505 + PROTOP_B DNA P 176 637 -516 9 675 3276 196 13 27 chrUextra 11846258 11847001 -17157655 + SAR_DM Satellite Satellite 1 732 -203 9 675 21 0 0 0 chrUextra 11847425 11847446 -17157210 + AT_rich Low_complexity Low_complexity 1 21 0 9 675 2127 13 4 0 chrUextra 11847945 11848182 -17156474 - DM176_I LTR Gypsy -6182 238 1 9 675 3110 47 57 74 chrUextra 11848182 11848684 -17155972 - DM176_LTR LTR Gypsy -27 480 1 9 675 426 71 0 0 chrUextra 11848789 11848845 -17155811 + R1_DM LINE R1 4778 4833 -523 9 675 2971 20 57 0 chrUextra 11848845 11848993 -17155663 - Stalker3_LTR LTR Gypsy 0 372 225 9 675 189 0 0 0 chrUextra 11848993 11849014 -17155642 + (CTTAT)n Simple_repeat Simple_repeat 2 22 0 9 675 2971 20 57 0 chrUextra 11849014 11849217 -17155439 - Stalker3_LTR LTR Gypsy -148 224 2 9 675 362 0 0 0 chrUextra 11849217 11849257 -17155399 - STALKER4_I LTR Gypsy 0 6530 6491 9 675 211 82 19 58 chrUextra 11849273 11849325 -17155331 + T-rich Low_complexity Low_complexity 2 51 0 9 675 23 0 0 0 chrUextra 11849325 11849348 -17155308 + AT_rich Low_complexity Low_complexity 1 23 0 9 675 284 48 24 0 chrUextra 11849359 11849401 -17155255 + (TTTTA)n Simple_repeat Simple_repeat 4 46 0 9 675 25 31 0 0 chrUextra 11849500 11849532 -17155124 + AT_rich Low_complexity Low_complexity 1 32 0 9 675 6361 34 0 0 chrUextra 11849633 11850377 -17154279 - ACCORD2_I LTR Gypsy -1722 5490 4747 9 675 5502 3 0 0 chrUextra 11850477 11851067 -17153589 - LSU-rRNA_Dme rRNA rRNA -733 3167 2578 9 675 1455 6 0 0 chrUextra 11851063 11851221 -17153435 - R2_DM LINE R2 -9 3598 3441 9 675 1044 0 0 0 chrUextra 11851949 11852065 -17152591 + (TTCTC)n Simple_repeat Simple_repeat 4 119 0 9 675 6426 28 0 0 chrUextra 11852165 11852909 -17151747 - R1_DM LINE R1 -2195 3161 2418 9 675 1212 59 0 0 chrUextra 11853009 11853161 -17151495 - DMTOM1_LTR LTR Gypsy -98 312 161 9 675 811 183 10 61 chrUextra 11853291 11853489 -17151167 + Gypsy5_LTR LTR Gypsy 1 188 -242 9 675 345 87 22 0 chrUextra 11853612 11853658 -17150998 + Gypsy5_I LTR Gypsy 1 47 -6462 9 675 4534 111 62 28 chrUextra 11853853 11854597 -17150059 + HETA LINE telomeric 5266 6034 -47 9 675 341 0 0 0 chrUextra 11854697 11854734 -17149922 - DM1731_LTR LTR Copia -295 41 5 9 675 1500 25 0 0 chrUextra 11854734 11855089 -17149567 + (TATAA)n Simple_repeat Simple_repeat 1 355 0 9 675 2892 33 0 0 chrUextra 11855089 11855424 -17149232 - DM1731_LTR LTR Copia -1 335 1 9 675 5536 84 39 12 chrUextra 11855541 11856285 -17148371 + Gypsy12_I LTR Gypsy 4708 5471 -75 9 675 990 41 25 0 chrUextra 11856385 11856506 -17148150 - BLOOD_I LTR Gypsy -6458 155 32 9 675 2013 47 8 45 chrUextra 11856634 11856902 -17147754 - BLOOD_LTR LTR Gypsy -141 258 1 9 675 309 28 0 0 chrUextra 11856902 11856938 -17147718 - FW_DM LINE Jockey -334 4358 4323 9 675 705 159 206 0 chrUextra 11856939 11857128 -17147528 - FW_DM LINE Jockey -3901 791 564 9 675 26 50 0 0 chrUextra 11857286 11857326 -17147330 + AT_rich Low_complexity Low_complexity 1 40 0 9 675 5332 15 3 2 chrUextra 11857380 11857973 -17146683 + LINEJ1_DM LINE Jockey 4 597 -4423 9 675 6849 1 3 1 chrUextra 11858073 11858817 -17145839 + LSU-rRNA_Dme rRNA rRNA 1805 2549 -1351 9 675 2012 285 18 33 chrUextra 11858938 11859656 -17145000 - FROGGER_I LTR Copia -856 1221 515 9 675 6274 26 0 12 chrUextra 11859761 11860505 -17144151 + FW_DM LINE Jockey 996 1730 -2962 9 675 2664 82 62 16 chrUextra 11860605 11861349 -17143307 - DMSAT6 Satellite Satellite -50 778 1 9 675 6400 9 1 1 chrUextra 11861449 11862193 -17142463 + IDEFIX_I LTR Gypsy 4460 5203 -425 9 675 6096 1 3 3 chrUextra 11862294 11862960 -17141696 + SSU-rRNA_Dme rRNA rRNA 1319 1984 -11 9 675 5987 28 4 12 chrUextra 11863157 11863881 -17140775 - BATUMI_I LTR Pao -5356 2607 1890 9 675 3099 194 17 22 chrUextra 11863981 11864705 -17139951 + SAR_DM Satellite Satellite 462 1181 -291 9 675 225 88 29 0 chrUextra 11864691 11864725 -17139931 - ARS406_DM Unknown Unknown -164 189 155 9 675 4344 27 27 0 chrUextra 11864827 11865343 -17139313 + FW_DM LINE Jockey 4159 4688 -4 9 675 1837 53 0 0 chrUextra 11865344 11865569 -17139087 - R1_DM LINE R1 -3966 1390 1166 9 675 5375 10 0 0 chrUextra 11865669 11866272 -17138384 + PROTOP_A DNA P 503 1105 0 9 675 1126 84 13 0 chrUextra 11866272 11866413 -17138243 + DOC3_DM LINE Jockey 1740 1882 -2858 9 675 6645 5 42 3 chrUextra 11866513 11867257 -17137399 + Gypsy4_I LTR Gypsy 2394 3166 -3122 9 675 3313 203 10 20 chrUextra 11867357 11868099 -17136557 + SAR_DM Satellite Satellite 1 734 -198 9 675 3556 97 0 50 chrUextra 11868201 11868779 -17135877 - R1_DM LINE R1 -4234 1122 574 9 675 988 107 30 30 chrUextra 11868780 11868944 -17135712 - R1_DM LINE R1 -5184 172 9 9 675 1146 52 39 0 chrUextra 11869045 11869200 -17135456 + QUASIMODO_I LTR Gypsy 5014 5174 -886 9 675 1773 58 16 0 chrUextra 11869190 11869447 -17135209 + QUASIMODO_I LTR Gypsy 5467 5727 -333 9 675 787 196 65 75 chrUextra 11869498 11869785 -17134871 + QUASIMODO_LTR LTR Gypsy 29 443 -215 9 675 6734 3 1 0 chrUextra 11869889 11870633 -17134023 + ROO_I LTR Pao 5599 6343 -1913 9 675 3456 182 22 14 chrUextra 11870737 11871471 -17133185 + SAR_DM Satellite Satellite 373 1112 -360 9 675 3652 0 0 0 chrUextra 11871933 11872321 -17132335 - ROO_LTR LTR Pao 0 428 41 9 675 1093 163 102 15 chrUextra 11872454 11872659 -17131997 + DMLTR5 LTR Gypsy 40 262 -4 9 675 2480 108 95 22 chrUextra 11872660 11873124 -17131532 + HMSBEAGLE_I LTR Gypsy 2 499 -6030 9 675 5882 22 5 36 chrUextra 11873266 11874009 -17130647 - DOC2_DM LINE Jockey -3259 1534 815 9 675 6444 27 1 0 chrUextra 11874109 11874853 -17129803 - R1_DM LINE R1 -2362 2994 2250 9 675 6819 3 1 1 chrUextra 11874953 11875697 -17128959 + DOC LINE Jockey 3716 4459 -266 9 675 6080 17 4 0 chrUextra 11875797 11876494 -17128162 - DOC2_DM LINE Jockey -3203 1590 891 9 675 2098 0 0 0 chrUextra 11878005 11878229 -17126427 + ROO_LTR LTR Pao 1 224 -204 9 675 6491 25 1 0 chrUextra 11878329 11879073 -17125583 + G5_DM LINE Jockey 586 1330 -3526 9 675 3446 189 7 7 chrUextra 11879173 11879907 -17124749 - SAR_DM Satellite Satellite -518 954 221 9 675 471 120 0 0 chrUextra 11879842 11879917 -17124739 + ARS406_DM Unknown Unknown 1 75 -278 9 675 254 306 103 30 chrUextra 11880240 11880405 -17124251 - Gypsy6_I LTR Gypsy -2298 4714 4538 9 675 4392 0 0 0 chrUextra 11880861 11881337 -17123319 - ROO_I LTR Pao -7780 476 1 9 675 2500 4 0 0 chrUextra 11881337 11881605 -17123051 - ROO_LTR LTR Pao 0 428 161 9 675 4979 7 0 0 chrUextra 11881705 11882251 -17122405 + R1_DM LINE R1 4811 5356 0 9 675 1811 5 0 10 chrUextra 11882249 11882449 -17122207 + LSU-rRNA_Dme rRNA rRNA 2640 2837 -1063 9 675 6629 0 1 1 chrUextra 11883393 11884137 -17120519 + R1_DM LINE R1 643 1386 -3970 9 675 1416 13 0 6 chrUextra 11884822 11884981 -17119675 - SSU-rRNA_Dme rRNA rRNA 0 1995 1838 9 675 5360 3 0 10 chrUextra 11885081 11885678 -17118978 + Invader1_I LTR Gypsy 2596 3186 0 9 675 1340 7 0 0 chrUextra 11885678 11885825 -17118831 + Invader1_LTR LTR Gypsy 1 147 -276 9 675 6735 3 0 1 chrUextra 11886769 11887513 -17117143 + DOC LINE Jockey 1126 1868 -2857 9 675 1343 26 0 0 chrUextra 11887613 11887766 -17116890 - PROTOP DNA P -4180 300 148 9 675 2572 48 6 0 chrUextra 11888018 11888333 -17116323 - PROTOP DNA P 0 4480 4164 9 675 1533 309 88 21 chrUextra 11888466 11889194 -17115462 - MICROPIA_I LTR Gypsy -1718 2758 1982 9 675 3085 197 19 20 chrUextra 11889305 11890045 -17114611 - SAR_DM Satellite Satellite -291 1181 443 9 675 268 196 0 19 chrUextra 11890157 11890209 -17114447 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 675 25 0 0 0 chrUextra 11890211 11890236 -17114420 + AT_rich Low_complexity Low_complexity 1 25 0 9 675 241 163 0 58 chrUextra 11890255 11890307 -17114349 - LSU-rRNA_Dme rRNA rRNA -1282 2618 2570 9 675 241 163 0 58 chrUextra 11890355 11890407 -17114249 - LSU-rRNA_Dme rRNA rRNA -1282 2618 2570 9 675 25 0 0 0 chrUextra 11890409 11890434 -17114222 + AT_rich Low_complexity Low_complexity 1 25 0 9 675 3594 0 0 0 chrUextra 11890506 11890889 -17113767 - LSU-rRNA_Dme rRNA rRNA 0 3900 3518 9 675 1657 6 0 0 chrUextra 11890989 11891168 -17113488 - LSU-rRNA_Dme rRNA rRNA -1082 2818 2640 9 675 5158 7 0 0 chrUextra 11891166 11891733 -17112923 - R1_DM LINE R1 0 5356 4790 9 675 753 12 0 0 chrUextra 11891833 11891915 -17112741 - NTS_DM Other Other -158 82 1 9 675 1899 17 17 17 chrUextra 11891915 11892155 -17112501 - NTS_DM Other Other 0 240 1 9 675 1887 21 17 17 chrUextra 11892155 11892395 -17112261 - NTS_DM Other Other 0 240 1 9 675 1286 28 22 22 chrUextra 11892395 11892577 -17112079 - NTS_DM Other Other 0 240 59 9 675 1248 7 0 0 chrUextra 11892677 11892816 -17111840 - G6_DM LINE Jockey -1903 139 1 9 675 786 0 0 11 chrUextra 11892816 11892904 -17111752 - NTS_DM Other Other -153 87 1 9 675 1995 4 17 13 chrUextra 11892904 11893143 -17111513 - NTS_DM Other Other 0 240 1 9 675 1881 21 17 17 chrUextra 11893143 11893383 -17111273 - NTS_DM Other Other 0 240 1 9 675 617 101 48 39 chrUextra 11893521 11893624 -17111032 - PROTOP_B DNA P -4 1149 1046 9 675 248 94 0 0 chrUextra 11893625 11893657 -17110999 - Invader3_I LTR Gypsy -3417 1471 1440 9 675 2001 238 118 14 chrUextra 11893661 11894248 -17110408 - Invader3_I LTR Gypsy -4043 845 198 9 675 2893 175 9 11 chrUextra 11894365 11894986 -17109670 - SAR_DM Satellite Satellite -444 742 1 9 675 765 107 8 8 chrUextra 11894986 11895109 -17109547 + ARS406_DM Unknown Unknown 1 123 -230 9 675 1755 317 14 14 chrUextra 11895236 11895952 -17108704 + Invader6_I LTR Gypsy 1366 2081 -2018 9 675 6337 20 1 5 chrUextra 11896052 11896795 -17107861 + R1_DM LINE R1 3772 4511 -845 9 675 6394 9 1 0 chrUextra 11896896 11897638 -17107018 - R1_DM LINE R1 -4242 1114 372 9 675 348 328 0 0 chrUextra 11897738 11897872 -17106784 + (TCG)n Simple_repeat Simple_repeat 2 135 0 9 675 6213 35 51 0 chrUextra 11898581 11899323 -17105333 - DMCR1A LINE CR1 -3036 1434 655 9 675 4140 2 2 0 chrUextra 11899427 11899900 -17104756 - I_DM LINE I -5658 573 100 9 675 1620 4 0 0 chrUextra 11899900 11900167 -17104489 + (CTTAT)n Simple_repeat Simple_repeat 1 267 0 9 675 6746 0 3 5 chrUextra 11900269 11901010 -17103646 - SSU-rRNA_Dme rRNA rRNA -140 1855 1117 9 675 1915 48 0 0 chrUextra 11901110 11901340 -17103316 + DM1731_LTR LTR Copia 107 336 0 9 675 1715 59 32 0 chrUextra 11901953 11902174 -17102482 + R1_DM LINE R1 5060 5287 -69 9 675 4443 24 0 0 chrUextra 11902196 11902692 -17101964 + R2_DM LINE R2 1932 2427 -1180 9 675 386 0 22 0 chrUextra 11902796 11902841 -17101815 - SSU-rRNA_Dme rRNA rRNA -1949 46 1 9 675 293 0 27 0 chrUextra 11902938 11902975 -17101681 + (TA)n Simple_repeat Simple_repeat 2 39 0 9 675 28 48 0 0 chrUextra 11903203 11903245 -17101411 + AT_rich Low_complexity Low_complexity 1 42 0 9 675 6696 1 0 0 chrUextra 11903639 11904382 -17100274 + QUASIMODO_I LTR Gypsy 1407 2149 -3911 9 675 3260 6 0 3 chrUextra 11904482 11904847 -17099809 - R1_DM LINE R1 -193 5163 4800 9 675 3397 8 0 0 chrUextra 11904854 11905225 -17099431 - R1_DM LINE R1 0 5356 4986 9 675 1002 273 3 8 chrUextra 11905326 11905714 -17098942 + Gypsy11_I LTR Gypsy 3002 3387 -137 9 675 186 71 0 0 chrUextra 11905883 11905911 -17098745 + (A)n Simple_repeat Simple_repeat 1 28 0 9 675 284 48 24 0 chrUextra 11906013 11906055 -17098601 + (TAAAA)n Simple_repeat Simple_repeat 4 46 0 9 675 6557 8 0 0 chrUextra 11906168 11906911 -17097745 + DM297_I LTR Gypsy 3294 4036 -2131 9 675 1460 12 0 0 chrUextra 11907011 11907173 -17097483 + FW_DM LINE Jockey 872 1033 -3659 9 675 4767 25 37 0 chrUextra 11907171 11907742 -17096914 + FW_DM LINE Jockey 1271 1862 -2830 9 675 6626 4 0 0 chrUextra 11907854 11908597 -17096059 + ROO_I LTR Pao 672 1414 -6842 9 675 978 17 0 0 chrUextra 11908697 11908813 -17095843 + (CACAA)n Simple_repeat Simple_repeat 2 117 0 9 675 5548 13 2 0 chrUextra 11908814 11909440 -17095216 + DMRT1B LINE R1 2292 2918 -2265 9 675 687 0 31 31 chrUextra 11909540 11909635 -17095021 + NTS_DM Other Other 130 224 -16 9 675 3999 2 0 0 chrUextra 11909635 11910063 -17094593 - ROO_LTR LTR Pao 0 428 1 9 675 1717 0 0 10 chrUextra 11910083 11910283 -17094373 + NTS_DM Other Other 1 198 -42 9 675 330 213 133 0 chrUextra 11911047 11911122 -17093534 - Gypsy12_I LTR Gypsy -2217 3329 3245 9 675 563 279 67 0 chrUextra 11911749 11911914 -17092742 - Gypsy12_I LTR Gypsy -2217 3329 3154 9 675 25 75 0 0 chrUextra 11912336 11912389 -17092267 + AT_rich Low_complexity Low_complexity 1 53 0 9 675 2130 8 0 0 chrUextra 11912432 11912672 -17091984 - ALUII_DM Unknown Unknown 0 240 1 9 675 21 57 0 0 chrUextra 11912672 11912707 -17091949 + AT_rich Low_complexity Low_complexity 1 35 0 9 675 6101 43 0 0 chrUextra 11912940 11913655 -17091001 + BATUMI_I LTR Pao 3603 4317 -3646 9 675 6474 24 1 0 chrUextra 11914598 11915341 -17089315 + R1_DM LINE R1 2105 2848 -2508 9 675 6738 3 0 0 chrUextra 11915441 11916184 -17088472 - DMRT1B LINE R1 -188 4995 4253 9 675 6564 8 3 0 chrUextra 11916284 11917027 -17087629 + STALKER4_I LTR Gypsy 5342 6086 -444 9 675 3368 182 12 11 chrUextra 11917128 11917857 -17086799 - SAR_DM Satellite Satellite -514 958 229 9 675 423 103 15 0 chrUextra 11917802 11917870 -17086786 + ARS406_DM Unknown Unknown 1 69 -284 9 675 2453 182 14 23 chrUextra 11918814 11919495 -17085161 - SAR_DM Satellite Satellite -798 675 1 9 675 6643 7 1 0 chrUextra 11919656 11920399 -17084257 + STALKER4_I LTR Gypsy 5432 6175 -355 9 675 1676 0 0 10 chrUextra 11920499 11920696 -17083960 - TIRANT_I LTR Gypsy -7497 195 1 9 675 3418 15 48 0 chrUextra 11920696 11921094 -17083562 - TIRANT_LTR LTR Gypsy 0 417 1 9 675 3772 57 65 0 chrUextra 11921388 11922085 -17082571 - PROTOP_A DNA P 0 1105 499 9 675 6564 16 3 0 chrUextra 11922185 11922928 -17081728 - R1_DM LINE R1 -2951 2405 1661 9 675 693 0 0 0 chrUextra 11923028 11923105 -17081551 + (GAGAA)n Simple_repeat Simple_repeat 2 78 0 9 675 2155 8 4 35 chrUextra 11923871 11924128 -17080528 + ROVER-LTR_DM LTR Gypsy 119 367 0 9 675 3198 0 0 150 chrUextra 11924128 11924614 -17080042 + ROVER-I_DM LTR Gypsy 1 413 -6171 9 675 1418 37 0 0 chrUextra 11924714 11924878 -17079778 + R1_DM LINE R1 5075 5238 -118 9 675 1381 62 0 17 chrUextra 11924861 11925042 -17079614 + R1_DM LINE R1 224 401 -4955 9 675 3173 40 62 0 chrUextra 11925053 11925457 -17079199 + R1_DM LINE R1 721 1149 -4207 9 675 6454 23 1 0 chrUextra 11925557 11926300 -17078356 - R1_DM LINE R1 -1679 3677 2934 9 675 2705 110 20 15 chrUextra 11926405 11927143 -17077513 - DMSAT6 Satellite Satellite -48 741 1 9 84 6642 20 0 0 chrUextra 11927243 11927986 -17076670 + MDG1_I LTR Gypsy 3855 4597 -1999 9 676 6944 1 0 0 chrUextra 11928086 11928829 -17075827 - R2_DM LINE R2 -1876 1731 989 9 676 6920 0 3 0 chrUextra 11928929 11929672 -17074984 + SSU-rRNA_Dme rRNA rRNA 280 1024 -971 9 676 268 196 0 19 chrUextra 11929840 11929892 -17074764 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 676 268 196 0 19 chrUextra 11929932 11929984 -17074672 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 676 278 176 0 19 chrUextra 11930015 11930067 -17074589 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 676 22 56 0 0 chrUextra 11930080 11930116 -17074540 + AT_rich Low_complexity Low_complexity 1 36 0 9 676 936 9 0 27 chrUextra 11930142 11930254 -17074402 + NTS_DM Other Other 25 133 -107 9 676 1297 37 0 6 chrUextra 11930254 11930419 -17074237 + NTS_DM Other Other 38 201 -39 9 676 293 26 0 93 chrUextra 11930472 11930515 -17074141 + NTS_DM Other Other 25 63 -177 9 676 5412 39 3 9 chrUextra 11930615 11931270 -17073386 + BATUMI_I LTR Pao 1957 2607 -5356 9 676 377 133 83 0 chrUextra 11931296 11931356 -17073300 + BATUMI_I LTR Pao 2599 2663 -5300 9 676 434 285 72 63 chrUextra 11931460 11931718 -17072938 - MICROPIA_I LTR Gypsy -3080 254 1 9 676 314 321 24 89 chrUextra 11931745 11931991 -17072665 - ACCORD2_I LTR Gypsy -6457 755 526 9 676 3193 198 12 21 chrUextra 11933144 11933886 -17070770 + SAR_DM Satellite Satellite 1 735 -203 9 676 5446 40 0 44 chrUextra 11933987 11934730 -17069926 - MAX_I LTR Pao -183 7731 7022 9 676 6604 12 0 1 chrUextra 11934830 11935573 -17069083 + QUASIMODO_I LTR Gypsy 2587 3328 -2732 9 676 940 0 0 0 chrUextra 11935673 11935776 -17068880 - NOMAD_I LTR Gypsy -6469 103 1 9 676 4709 8 0 0 chrUextra 11935776 11936294 -17068362 - NOMAD_LTR LTR Gypsy 0 518 1 9 676 422 0 136 0 chrUextra 11936294 11936412 -17068244 + (TA)n Simple_repeat Simple_repeat 1 134 0 9 676 4256 6 4 0 chrUextra 11936516 11936998 -17067658 + Invader4_I LTR Gypsy 1930 2413 0 9 676 2410 4 0 0 chrUextra 11936998 11937259 -17067397 + Invader4_LTR LTR Gypsy 1 261 -85 9 676 3228 186 19 25 chrUextra 11937359 11938098 -17066558 + SAR_DM Satellite Satellite 1 734 -203 9 676 371 35 69 17 chrUextra 11938202 11938260 -17066396 - HMSBEAGLE_I LTR Gypsy -6468 61 1 9 676 766 193 0 7 chrUextra 11938259 11938405 -17066251 - DMLTR5 LTR Gypsy 0 266 122 9 676 356 257 118 99 chrUextra 11938673 11938945 -17065711 + Invader1_LTR LTR Gypsy 84 360 -63 9 676 2610 17 0 0 chrUextra 11939045 11939335 -17065321 + DMRT1B LINE R1 4894 5183 0 9 676 471 105 133 0 chrUextra 11939342 11939447 -17065209 + TART_B1 LINE telomeric 2221 2339 -8315 9 676 3017 29 0 0 chrUextra 11939445 11939788 -17064868 + DMRT1A LINE R1 3602 3944 -1239 9 676 6717 5 1 0 chrUextra 11939889 11940631 -17064025 + FW_DM LINE Jockey 2195 2937 -1755 9 676 813 37 0 115 chrUextra 11941041 11941163 -17063493 - Baggins1 LINE LOA 0 5453 5346 9 676 6961 1 0 0 chrUextra 11941574 11942317 -17062339 + SSU-rRNA_Dme rRNA rRNA 224 966 -1029 9 676 23 0 0 0 chrUextra 11942818 11942841 -17061815 + AT_rich Low_complexity Low_complexity 1 23 0 9 676 6933 1 0 1 chrUextra 11943260 11944003 -17060653 + SSU-rRNA_Dme rRNA rRNA 175 916 -1079 9 676 1252 18 0 6 chrUextra 11944119 11944284 -17060372 - NTS_DM Other Other -39 201 38 9 676 843 18 0 27 chrUextra 11944284 11944396 -17060260 - NTS_DM Other Other -107 133 25 9 676 1252 18 0 6 chrUextra 11944448 11944613 -17060043 - NTS_DM Other Other -39 201 38 9 676 870 9 0 27 chrUextra 11944613 11944725 -17059931 - NTS_DM Other Other -107 133 25 9 676 22 56 0 0 chrUextra 11944751 11944787 -17059869 + AT_rich Low_complexity Low_complexity 1 36 0 9 676 255 125 0 0 chrUextra 11944800 11944840 -17059816 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 676 6434 3 1 0 chrUextra 11944946 11945689 -17058967 + DOC LINE Jockey 3189 3932 -793 9 676 6408 4 0 0 chrUextra 11945789 11946532 -17058124 + DMRT1A LINE R1 1428 2170 -3013 9 676 5564 1 5 65 chrUextra 11946632 11947375 -17057281 - LSU-rRNA_Dme rRNA rRNA -1938 1962 1264 9 676 647 239 56 60 chrUextra 11947488 11947773 -17056883 + GTWIN_LTR LTR Gypsy 122 405 -90 9 676 26 88 0 0 chrUextra 11948051 11948119 -17056537 + AT_rich Low_complexity Low_complexity 1 68 0 9 676 22 0 0 0 chrUextra 11948161 11948183 -17056473 + AT_rich Low_complexity Low_complexity 1 22 0 9 676 1441 30 81 29 chrUextra 11948318 11948524 -17056132 - BATUMI_I LTR Pao -745 7218 7002 9 676 4402 11 0 6 chrUextra 11948524 11949061 -17055595 - BATUMI_I LTR Pao 0 7963 7430 9 676 5869 8 0 3 chrUextra 11949161 11949904 -17054752 - QUASIMODO_I LTR Gypsy -600 5460 4720 9 676 6400 0 3 0 chrUextra 11950004 11950747 -17053909 - BLOOD_I LTR Gypsy -1910 4703 3959 9 676 366 307 50 46 chrUextra 11951350 11951589 -17053067 - Gypsy4_I LTR Gypsy -2815 3473 3234 9 676 2605 46 4 110 chrUextra 11951691 11952155 -17052501 - NINJA_I LTR Pao -5596 415 1 9 676 2175 36 0 7 chrUextra 11952156 11952433 -17052223 - NINJA_LTR LTR Pao -1 316 42 9 676 2882 183 8 9 chrUextra 11952533 11953276 -17051380 - SAR_DM Satellite Satellite -265 1207 192 9 676 1232 24 0 6 chrUextra 11953399 11953564 -17051092 - NTS_DM Other Other -39 201 38 9 676 870 9 0 27 chrUextra 11953564 11953676 -17050980 - NTS_DM Other Other -107 133 25 9 676 1252 18 0 6 chrUextra 11953728 11953893 -17050763 - NTS_DM Other Other -39 201 38 9 676 870 9 0 27 chrUextra 11953893 11954005 -17050651 - NTS_DM Other Other -107 133 25 9 676 22 56 0 0 chrUextra 11954031 11954067 -17050589 + AT_rich Low_complexity Low_complexity 1 36 0 9 676 245 128 0 0 chrUextra 11954080 11954119 -17050537 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2582 9 676 4806 22 72 0 chrUextra 11954222 11954962 -17049694 + R1_DM LINE R1 3862 4654 -702 9 676 4026 11 0 0 chrUextra 11955062 11955532 -17049124 - G2_DM LINE Jockey -2464 638 169 9 676 2241 32 0 0 chrUextra 11955527 11955804 -17048852 + STALKER4_I LTR Gypsy 3657 3933 -2597 9 676 31 26 0 0 chrUextra 11957015 11957053 -17047603 + AT_rich Low_complexity Low_complexity 1 38 0 9 676 3434 15 0 0 chrUextra 11957591 11957998 -17046658 + R1_DM LINE R1 4950 5356 0 9 676 2146 63 7 0 chrUextra 11958031 11958330 -17046326 + R1_DM LINE R1 1 301 -5055 9 676 6170 5 1 4 chrUextra 11958435 11959177 -17045479 + Gypsy4_I LTR Gypsy 4791 5530 -758 9 676 204 40 0 0 chrUextra 11959556 11959581 -17045075 + (TTG)n Simple_repeat Simple_repeat 2 26 0 9 676 1742 53 0 0 chrUextra 11959781 11960007 -17044649 + PROTOP DNA P 74 299 -4181 9 676 5928 1 46 7 chrUextra 11960120 11960863 -17043793 - ROO_I LTR Pao -7469 787 16 9 676 246 125 0 0 chrUextra 11960996 11961036 -17043620 - HMSBEAGLE_I LTR Gypsy -6315 214 175 9 676 244 128 0 21 chrUextra 11961259 11961307 -17043349 - HMSBEAGLE_I LTR Gypsy -6308 221 175 9 676 244 128 0 21 chrUextra 11961552 11961600 -17043056 - HMSBEAGLE_I LTR Gypsy -6308 221 175 9 676 327 66 65 16 chrUextra 11961619 11961681 -17042975 - HMSBEAGLE_I LTR Gypsy -6464 65 1 9 676 1835 23 0 0 chrUextra 11962654 11962874 -17041782 - STALKER4_LTR LTR Gypsy -182 220 1 9 676 2926 8 10 5 chrUextra 11962874 11963271 -17041385 - STALKER4_I LTR Gypsy 0 6530 6132 9 676 914 27 0 0 chrUextra 11963271 11963382 -17041274 - PROTOP_A DNA P 0 1105 995 9 676 2713 0 3 3 chrUextra 11963492 11963807 -17040849 + SSU-rRNA_Dme rRNA rRNA 1681 1995 0 9 676 21 89 0 0 chrUextra 11963826 11963882 -17040774 + AT_rich Low_complexity Low_complexity 1 56 0 9 676 6245 15 3 0 chrUextra 11964335 11965078 -17039578 + DM1731_I LTR Copia 2491 3235 -741 9 676 389 189 18 18 chrUextra 11965187 11965300 -17039356 + XDMR_DM Unknown Unknown 248 360 0 9 676 2986 176 7 21 chrUextra 11965215 11965921 -17038735 - SAR_DM Satellite Satellite -355 1117 422 9 676 3759 191 0 0 chrUextra 11966864 11967606 -17037050 + ROVER-I_DM LTR Gypsy 2838 3579 -3005 9 676 810 102 0 0 chrUextra 11968551 11968688 -17035968 + ARS406_DM Unknown Unknown 22 158 -195 9 676 2770 162 7 7 chrUextra 11968695 11969273 -17035383 - SAR_DM Satellite Satellite -569 903 326 9 676 695 40 61 0 chrUextra 11969415 11969514 -17035142 + DNAREP1_DM LINE Penelope 2 106 -488 9 676 30 45 0 0 chrUextra 11969660 11969704 -17034952 + AT_rich Low_complexity Low_complexity 1 44 0 9 676 30 45 0 0 chrUextra 11970306 11970350 -17034306 + AT_rich Low_complexity Low_complexity 1 44 0 9 676 6219 1 1 0 chrUextra 11971079 11971822 -17032834 + DM176_I LTR Gypsy 4480 5223 -1197 9 676 2936 187 52 26 chrUextra 11971933 11972665 -17031991 + Gypsy12_LTR LTR Gypsy 1503 2253 -83 9 676 3127 5 2 18 chrUextra 11972765 11973158 -17031498 + Invader1_I LTR Gypsy 2800 3186 0 9 676 3034 3 3 0 chrUextra 11973158 11973508 -17031148 + Invader1_LTR LTR Gypsy 1 351 -72 9 676 359 0 0 0 chrUextra 11973608 11973652 -17031004 + ARS406_DM Unknown Unknown 104 147 -206 9 676 2986 180 7 11 chrUextra 11973652 11974348 -17030308 - SAR_DM Satellite Satellite -498 974 282 9 676 3225 162 15 23 chrUextra 11974453 11975194 -17029462 - SAR_DM Satellite Satellite -361 1111 377 9 676 369 261 94 16 chrUextra 11975419 11975663 -17028993 + Gypsy7_I LTR Gypsy 1560 1852 -4008 9 676 2579 47 3 23 chrUextra 11975689 11976037 -17028619 - G5A_DM LINE Jockey -3 2838 2498 9 676 6417 1 3 0 chrUextra 11976137 11976880 -17027776 + R1_DM LINE R1 3891 4635 -721 9 676 247 21 80 60 chrUextra 11976980 11977030 -17027626 + NTS_DM Other Other 190 240 0 9 676 1726 17 17 21 chrUextra 11977030 11977271 -17027385 + NTS_DM Other Other 1 240 0 9 676 1828 8 17 13 chrUextra 11977271 11977510 -17027146 + NTS_DM Other Other 1 240 0 9 676 1721 5 14 0 chrUextra 11977510 11977722 -17026934 + NTS_DM Other Other 1 215 -25 9 676 4673 0 0 0 chrUextra 11977823 11978370 -17026286 + BARI_DM DNA Tc1 1181 1727 -1 9 676 1607 5 10 0 chrUextra 11978370 11978566 -17026090 + BARI_DM DNA Tc1 4 201 -1527 9 676 6105 18 3 1 chrUextra 11978666 11979409 -17025247 - R1_DM LINE R1 -839 4517 3774 9 676 2883 177 22 29 chrUextra 11979518 11980252 -17024404 - SAR_DM Satellite Satellite -314 1158 430 9 676 22 56 0 0 chrUextra 11980485 11980521 -17024135 + AT_rich Low_complexity Low_complexity 1 36 0 9 676 3522 5 5 0 chrUextra 11981195 11981606 -17023050 + NOMAD_LTR LTR Gypsy 106 518 0 9 676 2874 0 0 0 chrUextra 11981606 11981938 -17022718 + NOMAD_I LTR Gypsy 1 332 -6240 9 676 34 24 0 0 chrUextra 11982245 11982286 -17022370 + AT_rich Low_complexity Low_complexity 1 41 0 9 676 21 95 0 0 chrUextra 11982499 11982562 -17022094 + AT_rich Low_complexity Low_complexity 1 63 0 9 676 1796 0 0 0 chrUextra 11982574 11982781 -17021875 + LSU-rRNA_Dme rRNA rRNA 1 207 -3693 9 676 6237 7 1 1 chrUextra 11982881 11983624 -17021032 + R1_DM LINE R1 3387 4129 -1227 9 676 2957 181 15 20 chrUextra 11983736 11984467 -17020189 - SAR_DM Satellite Satellite -308 1164 438 9 676 6218 7 0 0 chrUextra 11984567 11985309 -17019347 - R1_DM LINE R1 -4385 971 230 9 676 3151 172 9 15 chrUextra 11985412 11986148 -17018508 - SAR_DM Satellite Satellite -549 923 192 9 676 2974 196 14 26 chrUextra 11986253 11986990 -17017666 + SAR_DM Satellite Satellite 1 728 -208 9 676 1610 52 217 10 chrUextra 11987093 11987498 -17017158 + DMCR1A LINE CR1 930 1418 -3052 9 676 883 280 27 50 chrUextra 11987495 11987833 -17016823 - TOM_I LTR Gypsy -1199 4913 4584 9 676 5080 47 3 44 chrUextra 11987953 11988673 -17015983 - BATUMI_I LTR Pao -5196 2767 2078 9 676 23 50 0 48 chrUextra 11989164 11989227 -17015429 + AT_rich Low_complexity Low_complexity 1 60 0 9 676 6173 11 1 0 chrUextra 11989619 11990361 -17014295 + STALKER4_I LTR Gypsy 1426 2168 -4362 9 676 4308 74 5 3 chrUextra 11990461 11991070 -17013586 - R1_DM LINE R1 -4746 610 1 9 676 758 41 0 10 chrUextra 11991105 11991203 -17013453 - R1_DM LINE R1 -2 5354 5258 9 676 2230 174 11 4 chrUextra 11991305 11992041 -17012615 + SAR_DM Satellite Satellite 1 740 -677 9 676 6154 9 3 1 chrUextra 11992145 11992887 -17011769 + R1_DM LINE R1 3339 4081 -1275 9 676 1964 8 0 0 chrUextra 11992987 11993225 -17011431 - ALUII_DM Unknown Unknown -2 238 1 9 676 21 57 0 0 chrUextra 11993225 11993260 -17011396 + AT_rich Low_complexity Low_complexity 1 35 0 9 676 22 35 0 0 chrUextra 11993457 11993486 -17011170 + AT_rich Low_complexity Low_complexity 1 29 0 9 676 37 39 0 0 chrUextra 11993587 11993638 -17011018 + AT_rich Low_complexity Low_complexity 1 51 0 9 676 365 21 21 0 chrUextra 11994523 11994571 -17010085 - SSU-rRNA_Dme rRNA rRNA 0 1995 1947 9 676 6387 3 0 0 chrUextra 11994671 11995413 -17009243 - R1_DM LINE R1 -3141 2215 1474 9 676 3183 177 9 12 chrUextra 11996355 11997097 -17007559 - SAR_DM Satellite Satellite -398 1074 335 9 676 31 0 0 0 chrUextra 11997199 11997230 -17007426 + AT_rich Low_complexity Low_complexity 1 31 0 9 676 28 48 0 0 chrUextra 11997558 11997600 -17007056 + AT_rich Low_complexity Low_complexity 1 42 0 9 676 401 106 45 0 chrUextra 11997873 11997939 -17006717 - NTS_DM Other Other -150 90 22 9 676 1228 117 75 44 chrUextra 11998044 11998374 -17006282 - TAHRE LINE telomeric -10145 318 6 9 676 994 61 0 0 chrUextra 11998372 11998504 -17006152 - HETA LINE telomeric -4584 1497 1366 9 676 1870 93 7 0 chrUextra 11998503 11998781 -17005875 - HETA LINE telomeric -106 5975 5696 9 676 6499 4 0 0 chrUextra 11998881 11999623 -17005033 + MICROPIA_I LTR Gypsy 1999 2740 -1736 9 676 957 37 7 49 chrUextra 11999723 11999865 -17004791 + G5A_DM LINE Jockey 2703 2838 -3 9 676 349 269 0 0 chrUextra 11999892 12000000 -17004656 - Gypsy7_I LTR Gypsy -3317 1667 1560 9 676 324 310 76 17 chrUextra 12000043 12000279 -17004377 - Gypsy7_I LTR Gypsy -3496 1488 1239 9 676 1314 29 6 39 chrUextra 12000280 12000462 -17004194 + G5A_DM LINE Jockey 2663 2838 -3 9 676 5536 3 5 65 chrUextra 12000565 12001307 -17003349 + LSU-rRNA_Dme rRNA rRNA 1174 1871 -2029 9 676 6212 12 1 3 chrUextra 12001407 12002148 -17002508 + IVK_DM LINE I 3474 4213 -1189 9 676 5427 53 0 0 chrUextra 12002249 12002991 -17001665 + QUASIMODO_I LTR Gypsy 3273 4014 -2046 9 676 2996 165 21 11 chrUextra 12003092 12003832 -17000824 - SAR_DM Satellite Satellite -261 1211 195 9 676 488 119 36 0 chrUextra 12004023 12004107 -17000549 + NTS_DM Other Other 4 90 -150 9 676 28 48 0 0 chrUextra 12004380 12004422 -17000234 + AT_rich Low_complexity Low_complexity 1 42 0 9 676 4533 63 3 3 chrUextra 12004793 12005409 -16999247 + R1_DM LINE R1 1 616 -4740 9 676 766 103 87 0 chrUextra 12005391 12005517 -16999139 + R1_DM LINE R1 935 1071 -4285 9 676 6388 0 0 1 chrUextra 12005617 12006359 -16998297 + R1_DM LINE R1 1403 2143 -3213 9 676 29 60 0 0 chrUextra 12006722 12006772 -16997884 + AT_rich Low_complexity Low_complexity 1 50 0 9 676 479 122 100 0 chrUextra 12006888 12006978 -16997678 + DNAREP1_DM LINE Penelope 496 594 0 9 676 26 50 0 0 chrUextra 12007032 12007072 -16997584 + AT_rich Low_complexity Low_complexity 1 40 0 9 676 21 71 0 0 chrUextra 12007096 12007138 -16997518 + AT_rich Low_complexity Low_complexity 1 42 0 9 676 6216 11 9 0 chrUextra 12007303 12008043 -16996613 + DOC2_DM LINE Jockey 1727 2473 -2320 9 676 5708 9 101 0 chrUextra 12008143 12008885 -16995771 + DM176_I LTR Gypsy 4388 5204 -1216 9 676 697 193 0 7 chrUextra 12009338 12009484 -16995172 + DMLTR5 LTR Gypsy 122 266 0 9 676 351 49 65 16 chrUextra 12009483 12009545 -16995111 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 9 676 244 128 0 21 chrUextra 12009567 12009615 -16995041 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 9 676 4913 108 0 0 chrUextra 12009827 12010541 -16994115 - Gypsy12_I LTR Gypsy -1003 4543 3830 9 676 6426 4 0 0 chrUextra 12010669 12011411 -16993245 - DOC2_DM LINE Jockey -781 4012 3271 9 676 6200 18 0 0 chrUextra 12011511 12012253 -16992403 + R1_DM LINE R1 3864 4605 -751 9 676 28 48 0 0 chrUextra 12012557 12012599 -16992057 + AT_rich Low_complexity Low_complexity 1 42 0 9 676 32 0 0 0 chrUextra 12012927 12012959 -16991697 + AT_rich Low_complexity Low_complexity 1 32 0 9 676 6489 0 0 0 chrUextra 12013195 12013937 -16990719 - BEL_I LTR Pao -3740 1664 923 9 676 6226 16 1 4 chrUextra 12014037 12014779 -16989877 + BATUMI_I LTR Pao 5256 5995 -1968 9 676 274 314 0 0 chrUextra 12014880 12015087 -16989569 + QUASIMODO_I LTR Gypsy 5737 5943 -117 9 676 34 24 0 0 chrUextra 12015851 12015892 -16988764 + AT_rich Low_complexity Low_complexity 1 41 0 9 676 2892 232 4 1 chrUextra 12016570 12017305 -16987351 + Stalker2_I LTR Gypsy 5229 5965 -1437 9 676 6359 1 0 0 chrUextra 12017405 12018147 -16986509 + STALKER4_I LTR Gypsy 3384 4125 -2405 9 676 2747 198 20 14 chrUextra 12018247 12018981 -16985675 + SAR_DM Satellite Satellite 434 1172 -300 9 676 4196 98 2 2 chrUextra 12019092 12019694 -16984962 - R1_DM LINE R1 -3656 1700 1099 9 676 291 160 74 118 chrUextra 12019694 12019829 -16984827 - R1_DM LINE R1 -4651 705 577 9 676 740 172 0 0 chrUextra 12019931 12020076 -16984580 - ARS406_DM Unknown Unknown -208 145 1 9 676 2840 184 14 20 chrUextra 12019973 12020672 -16983984 + SAR_DM Satellite Satellite 185 879 -593 9 676 3025 163 13 15 chrUextra 12020773 12021515 -16983141 - BATUMI_I LTR Pao -3014 4900 4209 9 676 492 151 11 0 chrUextra 12021629 12021722 -16982934 + DM176_LTR LTR Gypsy 131 224 -283 9 676 203 175 0 73 chrUextra 12021983 12022051 -16982605 + A-rich Low_complexity Low_complexity 2 64 0 9 676 496 169 0 0 chrUextra 12022052 12022141 -16982515 + DNAREP1_DM LINE Penelope 1 89 -505 9 676 1806 14 0 0 chrUextra 12022145 12022357 -16982299 + PROTOP_A DNA P 1 212 -893 9 676 656 136 4 45 chrUextra 12022457 12022606 -16982050 + STALKER4_LTR LTR Gypsy 249 399 -3 9 676 35 41 0 0 chrUextra 12022694 12022743 -16981913 + AT_rich Low_complexity Low_complexity 1 49 0 9 676 1847 182 29 22 chrUextra 12022743 12023197 -16981459 + Stalker2_I LTR Gypsy 291 747 -6655 9 676 1469 0 0 0 chrUextra 12023631 12023801 -16980855 - Copia2_LTR_DM LTR Copia 0 198 29 9 676 2076 4 0 0 chrUextra 12023801 12024041 -16980615 - Invader1_LTR LTR Gypsy 0 423 184 9 676 21 89 0 0 chrUextra 12024562 12024618 -16980038 + AT_rich Low_complexity Low_complexity 1 56 0 9 676 2142 0 4 0 chrUextra 12024637 12024883 -16979773 - SSU-rRNA_Dme rRNA rRNA 0 1995 1749 9 676 2925 178 13 17 chrUextra 12024984 12025724 -16978932 + SAR_DM Satellite Satellite 1 736 -397 9 676 2210 35 0 3 chrUextra 12025829 12026113 -16978543 - NINJA_I LTR Pao -260 5751 5469 9 676 3759 20 0 0 chrUextra 12026113 12026567 -16978089 + PROTOP_A DNA P 1 454 -651 9 676 246 150 0 0 chrUextra 12026671 12026711 -16977945 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 676 22 56 0 0 chrUextra 12026716 12026752 -16977904 + AT_rich Low_complexity Low_complexity 1 36 0 9 676 5092 0 2 2 chrUextra 12026824 12027409 -16977247 - LSU-rRNA_Dme rRNA rRNA 0 3900 3316 9 676 5690 3 1 1 chrUextra 12027509 12028170 -16976486 - R2_DM LINE R2 -2944 663 3 9 676 727 0 0 0 chrUextra 12028168 12028251 -16976405 - LSU-rRNA_Dme rRNA rRNA -1345 2555 2473 9 676 5973 11 0 3 chrUextra 12028351 12029082 -16975574 - STALKER4_I LTR Gypsy -4723 1807 1079 9 676 2605 3 0 0 chrUextra 12029193 12029492 -16975164 + DMRT1A LINE R1 4883 5181 -2 9 676 2996 11 0 0 chrUextra 12029491 12029843 -16974813 + ACCORD_LTR LTR Gypsy 207 558 0 9 676 786 22 0 0 chrUextra 12029843 12029935 -16974721 + ACCORD_I LTR Gypsy 1 92 -6196 9 676 3326 169 14 8 chrUextra 12030037 12030777 -16973879 + SAR_DM Satellite Satellite 282 1025 -447 9 676 2917 191 17 19 chrUextra 12030877 12031611 -16973045 + SAR_DM Satellite Satellite 1 732 -208 9 676 389 55 0 18 chrUextra 12031564 12031619 -16973037 - ARS406_DM Unknown Unknown -164 189 136 9 676 5104 73 15 18 chrUextra 12031719 12032458 -16972198 - R1_DM LINE R1 -4574 782 46 9 676 2315 99 9 29 chrUextra 12032561 12033299 -16971357 - DMSAT6 Satellite Satellite -41 723 1 9 676 6111 23 3 0 chrUextra 12033403 12034145 -16970511 + R1_DM LINE R1 4247 4990 -366 9 676 6210 20 0 0 chrUextra 12034245 12034987 -16969669 - DMRT1A LINE R1 -2433 2750 2009 9 676 3011 182 12 20 chrUextra 12035087 12035828 -16968828 + SAR_DM Satellite Satellite 438 1172 -300 9 676 382 200 80 64 chrUextra 12035951 12036138 -16968518 + DNAREP1_DM LINE Penelope 104 293 -301 9 676 504 77 0 0 chrUextra 12036115 12036191 -16968465 + DNAREP1_DM LINE Penelope 181 256 -338 9 676 507 99 312 6 chrUextra 12036191 12036382 -16968274 + DNAREP1_DM LINE Penelope 1 248 -346 9 676 1742 64 64 0 chrUextra 12036404 12036671 -16967985 - G4_DM LINE Jockey -1 3855 3572 9 676 6373 1 1 1 chrUextra 12036771 12037511 -16967145 + R2_DM LINE R2 107 846 -2761 9 676 543 326 30 29 chrUextra 12037626 12038001 -16966655 - GTWIN_I LTR Gypsy -2883 3538 2950 9 676 243 278 11 11 chrUextra 12038115 12038206 -16966450 - TIRANT_I LTR Gypsy -3464 4228 4138 9 676 528 42 0 0 chrUextra 12038283 12038355 -16966301 - TLD2 Unknown Unknown 0 218 147 9 676 397 0 16 0 chrUextra 12038455 12038516 -16966140 + IDEFIX_LTR LTR Gypsy 533 594 0 9 676 25 0 0 0 chrUextra 12038706 12038731 -16965925 + AT_rich Low_complexity Low_complexity 1 25 0 9 676 1061 0 8 0 chrUextra 12039072 12039197 -16965459 + IDEFIX_I LTR Gypsy 1 126 -5502 9 676 1311 31 12 0 chrUextra 12039297 12039459 -16965197 + DMCR1A LINE CR1 4307 4470 0 9 676 4588 28 21 0 chrUextra 12039458 12040039 -16964617 + DOC3_DM LINE Jockey 811 1403 -3337 9 676 5306 6 0 0 chrUextra 12040139 12040771 -16963885 + STALKER4_I LTR Gypsy 1398 2029 -4501 9 676 840 27 9 0 chrUextra 12040771 12040881 -16963775 + STALKER4_I LTR Gypsy 2334 2444 -4086 9 676 310 200 0 0 chrUextra 12040981 12041051 -16963605 - STALKER4_I LTR Gypsy -6226 304 235 9 676 33 56 0 0 chrUextra 12041052 12041106 -16963550 + AT_rich Low_complexity Low_complexity 1 54 0 9 676 3161 53 1 14 chrUextra 12041192 12041631 -16963025 - STALKER4_LTR LTR Gypsy -3 399 1 9 676 782 0 11 0 chrUextra 12041631 12041723 -16962933 + FW_DM LINE Jockey 3240 3332 -1360 9 676 5850 43 0 1 chrUextra 12041823 12042565 -16962091 + R1_DM LINE R1 1130 1870 -3486 9 676 6497 0 0 1 chrUextra 12042665 12043407 -16961249 + LSU-rRNA_Dme rRNA rRNA 2763 3503 -397 9 676 604 295 28 65 chrUextra 12043515 12044148 -16960508 + GTWIN_I LTR Gypsy 3088 4207 -2365 9 676 6324 4 1 0 chrUextra 12044349 12045091 -16959565 + R1_DM LINE R1 107 849 -4507 9 676 3062 178 27 20 chrUextra 12045193 12045931 -16958725 - SAR_DM Satellite Satellite -361 1111 369 9 676 5685 7 13 0 chrUextra 12046034 12046439 -16958217 - QUASIMODO_I LTR Gypsy -1922 4138 3734 9 676 243 0 0 0 chrUextra 12046439 12046466 -16958190 + (TTAGG)n Simple_repeat Simple_repeat 2 28 0 9 676 5685 7 13 0 chrUextra 12046466 12046775 -16957881 - QUASIMODO_I LTR Gypsy -2327 3733 3416 9 676 1716 5 5 5 chrUextra 12046876 12047082 -16957574 - SSU-rRNA_Dme rRNA rRNA -1789 206 1 9 676 32 0 0 0 chrUextra 12047215 12047247 -16957409 + AT_rich Low_complexity Low_complexity 1 32 0 9 676 28 48 0 0 chrUextra 12047575 12047617 -16957039 + AT_rich Low_complexity Low_complexity 1 42 0 9 676 6102 9 7 1 chrUextra 12048559 12049301 -16955355 + Gypsy4_I LTR Gypsy 4192 4937 -1351 9 676 3046 193 12 21 chrUextra 12049402 12050143 -16954513 + SAR_DM Satellite Satellite 1 734 -208 9 676 1985 8 0 0 chrUextra 12051553 12051793 -16952863 - ALUII_DM Unknown Unknown 0 240 1 9 676 2589 203 14 29 chrUextra 12051928 12052659 -16951997 + SAR_DM Satellite Satellite 399 1118 -354 9 676 255 261 11 0 chrUextra 12052577 12052669 -16951987 - XDMR_DM Unknown Unknown -1 359 267 9 676 339 144 62 0 chrUextra 12052769 12052866 -16951790 + GA-rich Low_complexity Low_complexity 2 104 0 9 676 1429 23 11 0 chrUextra 12052866 12053043 -16951613 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 9 676 3954 44 0 0 chrUextra 12053611 12054110 -16950546 + R1_DM LINE R1 1343 1841 -3515 9 676 1997 28 0 0 chrUextra 12054106 12054353 -16950303 + R1_DM LINE R1 2087 2333 -3023 9 676 6014 1 1 1 chrUextra 12054453 12055195 -16949461 - QUASIMODO_I LTR Gypsy -2076 3984 3243 9 676 4242 25 92 0 chrUextra 12055295 12055960 -16948696 - R1_DM LINE R1 -2657 2699 1974 9 676 639 26 0 0 chrUextra 12055960 12056037 -16948619 - R1_DM LINE R1 -3577 1779 1703 9 676 3130 201 77 5 chrUextra 12056137 12056879 -16947777 + Stalker2_I LTR Gypsy 3653 4447 -2955 9 676 34 24 0 0 chrUextra 12057654 12057695 -16946961 + AT_rich Low_complexity Low_complexity 1 41 0 9 676 959 185 235 0 chrUextra 12058051 12058281 -16946375 - DM412 LTR Gypsy -5045 1852 1569 9 676 24 0 0 0 chrUextra 12058392 12058416 -16946240 + AT_rich Low_complexity Low_complexity 1 24 0 9 676 428 96 169 0 chrUextra 12058480 12058563 -16946093 - DM412B_LTR LTR Gypsy -316 255 159 9 677 3271 208 16 8 chrUextra 12058665 12059391 -16945265 + TABOR_I LTR Gypsy 4183 4914 -1422 9 677 368 303 14 43 chrUextra 12060651 12060858 -16943798 + BLASTOPIA_I LTR Gypsy 3541 3741 -740 9 677 205 179 58 91 chrUextra 12061760 12061914 -16942742 + (CTATT)n Simple_repeat Simple_repeat 5 153 0 9 677 6385 12 7 0 chrUextra 12062031 12062773 -16941883 + QUASIMODO_I LTR Gypsy 2352 3098 -2962 9 677 4726 0 21 0 chrUextra 12062873 12063438 -16941218 + ROO_I LTR Pao 7680 8256 0 9 677 1592 0 0 0 chrUextra 12063438 12063615 -16941041 + ROO_LTR LTR Pao 1 177 -251 9 677 4154 172 57 0 chrUextra 12063722 12064456 -16940200 - Gypsy12_I LTR Gypsy -1799 3747 2972 9 677 510 48 0 0 chrUextra 12064557 12064619 -16940037 - BATUMI_I LTR Pao -3722 4241 4180 9 677 5524 48 1 6 chrUextra 12064615 12065299 -16939357 - BATUMI_I LTR Pao -3907 4056 3376 9 677 3309 184 9 11 chrUextra 12065399 12066140 -16938516 - SAR_DM Satellite Satellite -487 985 246 9 677 4756 11 0 4 chrUextra 12066241 12066801 -16937855 + TART LINE telomeric 13920 14477 0 9 677 1564 11 0 0 chrUextra 12066801 12066983 -16937673 + TART LINE telomeric 14101 14282 -195 9 677 5555 34 12 13 chrUextra 12067086 12067825 -16936831 - G2_DM LINE Jockey -2332 770 142 9 677 3345 44 7 0 chrUextra 12067925 12068331 -16936325 + DIVER2_I LTR Pao 529 937 -3210 9 677 769 78 0 10 chrUextra 12068300 12068404 -16936252 + DIVER2_I LTR Pao 4045 4147 0 9 677 2352 11 0 0 chrUextra 12068404 12068667 -16935989 + DIVER2_LTR LTR Pao 1 263 -122 9 677 1110 29 0 0 chrUextra 12069370 12069508 -16935148 + (CAAGA)n Simple_repeat Simple_repeat 2 139 0 9 677 2780 6 0 3 chrUextra 12069609 12069929 -16934727 - FW_DM LINE Jockey -1191 3501 3183 9 677 3081 92 31 2 chrUextra 12069926 12070351 -16934305 + HMSBEAGLE_I LTR Gypsy 4936 5372 -1157 9 677 6476 20 0 0 chrUextra 12070451 12071193 -16933463 + R1_DM LINE R1 1939 2680 -2676 9 677 3224 187 20 22 chrUextra 12072136 12072877 -16931779 + SAR_DM Satellite Satellite 1 739 -217 9 677 792 37 0 115 chrUextra 12073317 12073439 -16931217 - Baggins1 LINE LOA 0 5453 5346 9 677 2050 223 99 37 chrUextra 12073828 12074556 -16930100 - Gypsy12_LTR LTR Gypsy -529 1807 1035 9 677 6327 9 40 0 chrUextra 12074661 12075403 -16929253 + DOC2_DM LINE Jockey 2637 3408 -1385 9 677 6407 1 3 3 chrUextra 12075503 12076245 -16928411 + ROO_I LTR Pao 2692 3433 -4823 9 677 435 165 23 12 chrUextra 12076399 12076485 -16928171 + NTS_DM Other Other 4 90 -150 9 677 28 48 0 0 chrUextra 12076760 12076802 -16927854 + AT_rich Low_complexity Low_complexity 1 42 0 9 677 3910 83 10 29 chrUextra 12077220 12077814 -16926842 - Gypsy12_I LTR Gypsy -4963 583 1 9 677 297 186 34 34 chrUextra 12077828 12077917 -16926739 - Gypsy12A_LTR LTR Gypsy -553 1727 1639 9 677 3009 189 17 14 chrUextra 12078032 12078769 -16925887 - SAR_DM Satellite Satellite -625 738 1 9 677 6529 1 0 0 chrUextra 12078871 12079613 -16925043 + DM176_I LTR Gypsy 4089 4830 -1590 9 677 2456 101 12 32 chrUextra 12079713 12080309 -16924347 - DMSAT6 Satellite Satellite -80 583 1 9 677 1210 7 0 7 chrUextra 12080314 12080455 -16924201 + FW_DM LINE Jockey 1524 1663 -3029 9 677 989 54 6 20 chrUextra 12080598 12081296 -16923360 - RSP Satellite Satellite 0 688 1 9 677 3565 176 8 9 chrUextra 12081396 12082137 -16922519 + SAR_DM Satellite Satellite 298 1037 -435 9 677 6708 1 0 0 chrUextra 12082237 12082978 -16921678 + R1_DM LINE R1 1352 2092 -3264 9 677 6686 4 0 1 chrUextra 12083078 12083819 -16920837 + R2_DM LINE R2 7 746 -2861 9 677 6465 27 0 0 chrUextra 12083919 12084660 -16919996 - DMCR1A LINE CR1 -3066 1404 664 9 677 198 0 0 0 chrUextra 12084852 12084874 -16919782 + (TA)n Simple_repeat Simple_repeat 1 22 0 9 677 3515 5 7 7 chrUextra 12084874 12085287 -16919369 + DM297_LTR LTR Gypsy 2 414 0 9 677 1720 19 0 9 chrUextra 12085287 12085501 -16919155 + DM297_I LTR Gypsy 1 212 -5955 9 677 3495 172 10 8 chrUextra 12085601 12086329 -16918327 + SAR_DM Satellite Satellite 348 1076 -396 9 677 6461 9 1 1 chrUextra 12086442 12087183 -16917473 + ACCORD2_I LTR Gypsy 5616 6356 -856 9 677 220 141 46 15 chrUextra 12087782 12087847 -16916809 + (TTA)n Simple_repeat Simple_repeat 2 68 0 9 677 514 220 7 14 chrUextra 12088124 12088267 -16916389 + XDMR_DM Unknown Unknown 219 360 0 9 677 3299 280 34 54 chrUextra 12088145 12089703 -16914953 - SAR_DM Satellite Satellite -313 1526 1 9 677 6280 12 1 1 chrUextra 12089807 12090547 -16914109 + QUASIMODO_I LTR Gypsy 586 1325 -4735 9 677 1243 146 101 16 chrUextra 12090647 12090904 -16913752 - MDG1_LTR LTR Gypsy -75 367 89 9 677 1587 16 0 12 chrUextra 12090906 12091158 -16913498 + (TTA)n Simple_repeat Simple_repeat 1 249 0 9 677 792 62 101 0 chrUextra 12091158 12091287 -16913369 - MDG1_I LTR Gypsy -1720 4876 4735 9 677 607 21 21 0 chrUextra 12091292 12091388 -16913268 - FW_DM LINE Jockey 0 4692 4595 9 677 1699 55 36 0 chrUextra 12091520 12091739 -16912917 + PROTOP DNA P 1 227 -4253 9 677 3050 40 0 8 chrUextra 12091726 12092109 -16912547 - PROTOP_A DNA P -76 1029 650 9 677 819 37 398 0 chrUextra 12092106 12092229 -16912427 - PROTOP DNA P -3069 1411 1240 9 677 1231 0 0 0 chrUextra 12092546 12092681 -16911975 + 5S_DM RNA RNA 1 135 0 9 677 1231 0 0 0 chrUextra 12092905 12093040 -16911616 + 5S_DM RNA RNA 1 135 0 9 677 6617 0 1 0 chrUextra 12093170 12093908 -16910748 + ROO_I LTR Pao 1082 1820 -6436 9 677 3240 186 16 26 chrUextra 12094013 12094752 -16909904 - SAR_DM Satellite Satellite -593 731 1 9 677 201 121 0 0 chrUextra 12094995 12095028 -16909628 + (TC)n Simple_repeat Simple_repeat 1 33 0 9 677 6796 0 0 0 chrUextra 12095693 12096434 -16908222 - MAX_I LTR Pao -4112 3802 3062 9 677 3215 220 30 20 chrUextra 12096539 12098116 -16906540 + SAR_DM Satellite Satellite 1 1592 -396 9 677 6465 1 0 1 chrUextra 12098216 12098956 -16905700 + DM297_I LTR Gypsy 198 936 -5231 9 677 2026 174 14 7 chrUextra 12099057 12099782 -16904874 + SAR_DM Satellite Satellite 1 730 -558 9 677 4386 7 77 0 chrUextra 12099898 12100639 -16904017 - QUASIMODO_I LTR Gypsy -5204 856 59 9 677 273 57 0 0 chrUextra 12101445 12101480 -16903176 + (TAA)n Simple_repeat Simple_repeat 2 36 0 9 677 259 128 0 21 chrUextra 12101706 12101754 -16902902 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 9 677 259 128 0 21 chrUextra 12101980 12102028 -16902628 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 9 677 259 128 0 21 chrUextra 12102272 12102320 -16902336 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 9 677 3635 31 116 0 chrUextra 12103293 12103759 -16900897 - PROTOP DNA P -3069 1411 892 9 677 1610 51 0 4 chrUextra 12103747 12104003 -16900653 - PROTOP DNA P -3648 832 578 9 677 3410 176 9 11 chrUextra 12104107 12104844 -16899812 + SAR_DM Satellite Satellite 198 933 -539 9 677 359 200 0 12 chrUextra 12104947 12105033 -16899623 + XDMR_DM Unknown Unknown 267 351 -9 9 677 3173 177 11 22 chrUextra 12104957 12105685 -16898971 - SAR_DM Satellite Satellite -354 1118 399 9 677 274 29 0 0 chrUextra 12105785 12105819 -16898837 + QUASIMODO_LTR LTR Gypsy 574 607 -51 9 677 5189 65 17 7 chrUextra 12105826 12106523 -16898133 + QUASIMODO_I LTR Gypsy 30 733 -5327 9 677 185 0 0 39 chrUextra 12106626 12106652 -16898004 + (TTA)n Simple_repeat Simple_repeat 2 26 0 9 677 1144 144 64 5 chrUextra 12106703 12106906 -16897750 - DNAREP1_DM LINE Penelope -358 236 22 9 677 4547 106 12 6 chrUextra 12107468 12108145 -16896511 + HETA LINE telomeric 2507 3187 -2894 9 677 6607 1 0 3 chrUextra 12108308 12109049 -16895607 + R1_DM LINE R1 2552 3290 -2066 9 677 5481 28 2 0 chrUextra 12109149 12109789 -16894867 - R1_DM LINE R1 -1582 3774 3134 9 677 878 53 0 9 chrUextra 12109775 12109890 -16894766 - R1_DM LINE R1 -3063 2293 2180 9 677 1295 33 0 0 chrUextra 12109990 12110143 -16894513 + CIRCE LINE Composite 4828 4980 -1376 9 677 1698 35 4 26 chrUextra 12110500 12110731 -16893925 + CIRCE LINE Composite 4981 5206 -1150 9 677 1410 187 57 35 chrUextra 12111199 12111571 -16893085 + STALKER4_I LTR Gypsy 885 1264 -5266 9 677 6000 9 1 11 chrUextra 12111672 12112413 -16892243 + STALKER4_I LTR Gypsy 5301 6034 -496 9 677 2053 184 10 8 chrUextra 12113354 12114069 -16890587 + SAR_DM Satellite Satellite 1 715 -677 9 677 1200 120 10 15 chrUextra 12115036 12115239 -16889417 - Gypsy12_I LTR Gypsy -5122 424 223 9 677 1183 183 88 24 chrUextra 12115376 12115707 -16888949 - Gypsy12_LTR LTR Gypsy -827 1509 1158 9 677 459 232 145 73 chrUextra 12115879 12116237 -16888419 - TV1I LTR Gypsy -1146 4914 4666 9 677 1119 226 40 15 chrUextra 12116206 12116617 -16888039 - TV1I LTR Gypsy -1677 4383 3874 9 677 201 260 0 0 chrUextra 12116748 12116825 -16887831 + (TA)n Simple_repeat Simple_repeat 2 78 0 9 677 22 0 0 0 chrUextra 12116919 12116941 -16887715 + AT_rich Low_complexity Low_complexity 1 22 0 9 677 236 253 90 50 chrUextra 12117014 12117114 -16887542 + DNAREP1_DM LINE Penelope 489 592 -2 9 677 320 161 10 147 chrUextra 12117353 12117455 -16887201 - DNAREP1_DM LINE Penelope -6 588 501 9 677 3223 245 23 45 chrUextra 12117559 12118972 -16885684 + SAR_DM Satellite Satellite 1 1382 -354 9 677 570 186 0 0 chrUextra 12118996 12119114 -16885542 - ARS406_DM Unknown Unknown -235 118 1 9 677 563 203 0 7 chrUextra 12119114 12119134 -16885522 + SAR_DM Satellite Satellite 528 664 -808 9 677 706 148 30 61 chrUextra 12119601 12119766 -16884890 - Gypsy5_LTR LTR Gypsy -194 236 77 9 677 583 73 0 0 chrUextra 12119770 12119852 -16884804 - Jockey2 LINE Jockey -3346 82 1 9 677 6372 3 0 0 chrUextra 12120082 12120823 -16883833 + FW_DM LINE Jockey 1224 1964 -2728 9 677 6212 20 0 0 chrUextra 12120923 12121664 -16882992 + Gypsy4_I LTR Gypsy 3230 3970 -2318 9 677 6487 1 1 0 chrUextra 12121764 12122505 -16882151 - LSU-rRNA_Dme rRNA rRNA -155 3745 3004 9 677 1836 184 31 23 chrUextra 12122605 12123341 -16881315 + SAR_DM Satellite Satellite 1 741 -678 9 677 6039 32 0 0 chrUextra 12123446 12124187 -16880469 + DIVER_I LTR Pao 2977 3717 -1926 9 677 5960 24 16 0 chrUextra 12124287 12125028 -16879628 + DOC2_DM LINE Jockey 1004 1756 -3037 9 677 6153 9 38 0 chrUextra 12125128 12125869 -16878787 + DOC2_DM LINE Jockey 3867 4635 -158 9 677 3536 209 0 4 chrUextra 12125969 12126710 -16877946 + ROVER-I_DM LTR Gypsy 2260 2997 -3587 9 677 6214 8 4 0 chrUextra 12126810 12127551 -16877105 + Invader3_I LTR Gypsy 3830 4573 -315 9 677 6244 5 3 1 chrUextra 12127651 12128392 -16876264 - R1_DM LINE R1 -963 4393 3652 9 677 2141 147 36 17 chrUextra 12128493 12128963 -16875693 + SAR_DM Satellite Satellite 425 903 -569 9 677 936 108 0 6 chrUextra 12128970 12129129 -16875527 - ARS406_DM Unknown Unknown -195 158 1 9 677 933 217 4 8 chrUextra 12128978 12129233 -16875423 + SAR_DM Satellite Satellite 496 749 -723 9 677 34 24 0 0 chrUextra 12130391 12130432 -16874224 + AT_rich Low_complexity Low_complexity 1 41 0 9 677 1105 188 238 47 chrUextra 12130445 12130915 -16873741 - TART LINE telomeric -3988 10489 9930 9 677 5491 35 1 23 chrUextra 12131856 12132597 -16872059 - BATUMI_I LTR Pao -4483 3480 2756 9 677 3564 58 91 12 chrUextra 12132697 12133270 -16871386 + PROTOP_A DNA P 488 1105 0 9 677 726 0 10 10 chrUextra 12133548 12133651 -16871005 + IDEFIX_LTR LTR Gypsy 492 594 0 9 677 25 0 0 0 chrUextra 12133841 12133866 -16870790 + AT_rich Low_complexity Low_complexity 1 25 0 9 677 1452 5 25 15 chrUextra 12134379 12134577 -16870079 + NTS_DM Other Other 41 240 0 9 677 1301 6 0 18 chrUextra 12134577 12134742 -16869914 + NTS_DM Other Other 1 162 -78 9 677 458 119 35 12 chrUextra 12134852 12134937 -16869719 + NTS_DM Other Other 4 90 -150 9 677 648 0 0 0 chrUextra 12135228 12135300 -16869356 + (TTCTC)n Simple_repeat Simple_repeat 4 75 0 9 677 4715 24 10 0 chrUextra 12136902 12137487 -16867169 + NINJA_I LTR Pao 2631 3221 -2790 9 677 1394 0 0 0 chrUextra 12137482 12137643 -16867013 + NINJA_I LTR Pao 3439 3599 -2412 9 677 6292 8 1 5 chrUextra 12137745 12138484 -16866172 - MICROPIA_I LTR Gypsy -681 3795 3060 9 677 6170 12 0 5 chrUextra 12139431 12140166 -16864490 + MICROPIA_I LTR Gypsy 3219 3949 -527 9 677 1263 65 54 0 chrUextra 12140268 12140452 -16864204 - QUASIMODO_I LTR Gypsy -5837 223 30 9 677 2272 98 8 31 chrUextra 12140459 12140849 -16863807 - QUASIMODO_LTR LTR Gypsy -51 607 91 9 677 1476 93 85 238 chrUextra 12141948 12142569 -16862087 - MAX_I LTR Pao -6457 1457 932 9 677 242 219 12 88 chrUextra 12142569 12142649 -16862007 - MAX_I LTR Pao -6760 1154 1081 9 677 255 125 0 0 chrUextra 12142801 12142841 -16861815 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 677 246 150 0 0 chrUextra 12142884 12142924 -16861732 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 677 246 150 0 0 chrUextra 12142976 12143016 -16861640 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 677 246 150 0 0 chrUextra 12143068 12143108 -16861548 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 677 246 150 0 0 chrUextra 12143160 12143200 -16861456 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 677 29 28 0 0 chrUextra 12143205 12143241 -16861415 + AT_rich Low_complexity Low_complexity 1 36 0 9 677 1903 0 0 0 chrUextra 12143313 12143530 -16861126 - LSU-rRNA_Dme rRNA rRNA 0 3900 3684 9 677 3621 40 11 4 chrUextra 12143630 12144101 -16860555 + DMRT1B LINE R1 4710 5183 0 9 677 546 28 106 0 chrUextra 12144119 12144261 -16860395 + (CAGAC)n Simple_repeat Simple_repeat 1 157 0 9 677 728 41 10 0 chrUextra 12144273 12144371 -16860285 + DMRT1A LINE R1 1 99 -5084 9 677 5489 49 24 0 chrUextra 12144473 12145212 -16859444 - R1_DM LINE R1 -4247 1109 353 9 677 6199 0 0 0 chrUextra 12145312 12146053 -16858603 + DM176_I LTR Gypsy 4563 5303 -1117 9 677 1404 108 0 9 chrUextra 12146181 12146396 -16858260 - BS2 LINE Jockey -4259 462 250 9 677 360 274 20 0 chrUextra 12146407 12146509 -16858147 - GTWIN_I LTR Gypsy -4772 1649 1546 9 677 1624 159 24 0 chrUextra 12146598 12146894 -16857762 - GTWIN_I LTR Gypsy -5149 1272 970 9 677 911 78 193 0 chrUextra 12146994 12147160 -16857496 - TART LINE telomeric -10683 3794 3597 9 677 3580 75 147 3 chrUextra 12147148 12147735 -16856921 - TART LINE telomeric -6479 7998 7328 9 677 6340 7 0 0 chrUextra 12147835 12148576 -16856080 - DMRT1B LINE R1 -74 5109 4369 9 677 6184 11 0 0 chrUextra 12148676 12149417 -16855239 + MDG1_I LTR Gypsy 2491 3231 -3365 9 677 5566 44 5 11 chrUextra 12149517 12150258 -16854398 + BATUMI_I LTR Pao 1810 2546 -5417 9 677 3115 185 8 11 chrUextra 12150359 12151098 -16853558 - SAR_DM Satellite Satellite -464 1008 272 9 677 2533 178 60 35 chrUextra 12151201 12151935 -16852721 - TART LINE telomeric -4813 9664 8466 9 677 2934 192 6 17 chrUextra 12152040 12152781 -16851875 + SAR_DM Satellite Satellite 1 733 -353 9 677 37 39 0 0 chrUextra 12153148 12153199 -16851457 + AT_rich Low_complexity Low_complexity 1 51 0 9 677 22 35 0 0 chrUextra 12153300 12153329 -16851327 + AT_rich Low_complexity Low_complexity 1 29 0 9 677 21 57 0 0 chrUextra 12153526 12153561 -16851095 + AT_rich Low_complexity Low_complexity 1 35 0 9 677 499 0 0 0 chrUextra 12153561 12153622 -16851034 + ALUII_DM Unknown Unknown 1 61 -179 9 677 6151 7 0 0 chrUextra 12153722 12154463 -16850193 + Invader2_I LTR Gypsy 2348 3088 -1504 9 677 5787 28 50 0 chrUextra 12154563 12155304 -16849352 + FW_DM LINE Jockey 1163 1940 -2752 9 677 4894 97 4 1 chrUextra 12155404 12156145 -16848511 - S_DM DNA Tc1 -226 1510 768 9 677 2993 0 0 0 chrUextra 12157488 12157827 -16846829 - ROO_LTR LTR Pao 0 428 90 9 677 3342 170 9 11 chrUextra 12157930 12158668 -16845988 - SAR_DM Satellite Satellite -435 1037 301 9 677 4169 152 29 0 chrUextra 12158770 12159506 -16845150 + Gypsy5_I LTR Gypsy 2914 3670 -2839 9 677 1215 18 6 6 chrUextra 12159621 12159785 -16844871 - NTS_DM Other Other -39 201 38 9 677 870 9 0 27 chrUextra 12159785 12159897 -16844759 - NTS_DM Other Other -107 133 25 9 677 1252 18 0 6 chrUextra 12159949 12160114 -16844542 - NTS_DM Other Other -39 201 38 9 677 870 9 0 27 chrUextra 12160114 12160226 -16844430 - NTS_DM Other Other -107 133 25 9 677 429 28 14 14 chrUextra 12160278 12160350 -16844306 - NTS_DM Other Other -39 201 130 9 677 2706 40 34 0 chrUextra 12160528 12160878 -16843778 - Baggins1 LINE LOA -202 5251 4890 9 677 1260 72 25 10 chrUextra 12161291 12161487 -16843169 - CIRCE LINE Composite -1177 5179 4981 9 677 1292 84 5 0 chrUextra 12161841 12162032 -16842624 - CIRCE LINE Composite -1376 4980 4789 9 677 244 128 0 21 chrUextra 12162244 12162292 -16842364 - HMSBEAGLE_I LTR Gypsy -6308 221 175 9 677 244 128 0 21 chrUextra 12162522 12162570 -16842086 - HMSBEAGLE_I LTR Gypsy -6308 221 175 9 677 351 49 65 16 chrUextra 12162592 12162654 -16842002 - HMSBEAGLE_I LTR Gypsy -6464 65 1 9 677 697 193 0 7 chrUextra 12162653 12162799 -16841857 - DMLTR5 LTR Gypsy 0 266 122 9 677 6349 0 1 4 chrUextra 12163814 12164555 -16840101 - SSU-rRNA_Dme rRNA rRNA -473 1522 784 9 677 6447 1 1 1 chrUextra 12164655 12165396 -16839260 - SSU-rRNA_Dme rRNA rRNA -1057 938 198 9 677 6507 1 0 0 chrUextra 12165496 12166237 -16838419 - SSU-rRNA_Dme rRNA rRNA -1029 966 226 9 677 6774 4 3 0 chrUextra 12166337 12167078 -16837578 + DMRT1B LINE R1 1445 2187 -2996 9 677 1782 300 44 7 chrUextra 12167192 12167917 -16836739 - MICROPIA_I LTR Gypsy -1261 3215 2464 9 677 5306 92 22 0 chrUextra 12168021 12168759 -16835897 + DMRT1C LINE R1 2828 3581 -1862 9 677 2611 119 15 12 chrUextra 12168860 12169601 -16835055 - DMSAT6 Satellite Satellite -41 743 1 9 677 3256 177 16 13 chrUextra 12169705 12170416 -16834240 - SAR_DM Satellite Satellite -593 879 167 9 677 964 103 0 0 chrUextra 12170297 12170442 -16834214 + ARS406_DM Unknown Unknown 1 145 -208 9 677 1714 5 5 0 chrUextra 12170542 12170736 -16833920 - Copia2_LTR_DM LTR Copia -3 195 1 9 677 4922 11 0 0 chrUextra 12170736 12171283 -16833373 - Copia2_I LTR Copia 0 4162 3616 9 677 1526 54 9 33 chrUextra 12171383 12171595 -16833061 + BATUMI_LTR LTR Pao 66 272 0 9 677 2367 150 73 3 chrUextra 12171597 12172124 -16832532 + IDEFIX_I LTR Gypsy 1978 2658 -3402 9 677 6601 12 1 0 chrUextra 12172224 12172961 -16831695 - FW_DM LINE Jockey -1888 2804 2067 9 677 1607 288 54 4 chrUextra 12173066 12173806 -16830850 - Gypsy4_I LTR Gypsy -2719 3569 2735 9 677 6236 12 57 0 chrUextra 12173906 12174647 -16830009 + Gypsy4_I LTR Gypsy 4383 5165 -1123 9 677 5133 23 50 3 chrUextra 12174748 12175395 -16829261 - Invader2_I LTR Gypsy -3915 677 1 9 677 681 66 22 0 chrUextra 12175395 12175486 -16829170 - Invader2_LTR LTR Gypsy 0 266 174 9 677 4652 45 2 2 chrUextra 12175766 12176329 -16828327 - R1_DM LINE R1 -4037 1319 757 9 677 6572 16 0 1 chrUextra 12176429 12177170 -16827486 - FW_DM LINE Jockey -1047 3645 2906 9 677 3560 174 8 9 chrUextra 12177273 12178011 -16826645 + SAR_DM Satellite Satellite 282 1018 -454 9 677 6181 39 0 0 chrUextra 12178111 12178852 -16825804 + IDEFIX_I LTR Gypsy 960 1700 -3928 9 677 208 200 31 0 chrUextra 12178985 12179050 -16825606 + (TTA)n Simple_repeat Simple_repeat 2 68 0 9 677 21 36 0 0 chrUextra 12179373 12179401 -16825255 + AT_rich Low_complexity Low_complexity 1 28 0 9 677 58 15 0 0 chrUextra 12179575 12179640 -16825016 + AT_rich Low_complexity Low_complexity 1 65 0 9 677 920 94 14 0 chrUextra 12179793 12179931 -16824725 - SAR_DM Satellite Satellite -604 868 729 9 677 2934 173 7 9 chrUextra 12179949 12180532 -16824124 - SAR_DM Satellite Satellite -466 1006 425 9 677 5331 62 22 2 chrUextra 12180633 12181371 -16823285 - TART LINE telomeric -4898 9579 8863 9 677 5876 53 3 5 chrUextra 12181473 12182213 -16822443 + IDEFIX_I LTR Gypsy 2533 3270 -2358 9 677 775 11 0 21 chrUextra 12182314 12182407 -16822249 - NTS_DM Other Other -149 91 1 9 677 1540 15 20 20 chrUextra 12182407 12182610 -16822046 - NTS_DM Other Other 0 240 38 9 677 841 18 0 44 chrUextra 12182610 12182724 -16821932 - NTS_DM Other Other -107 133 25 9 677 1302 18 0 12 chrUextra 12182776 12182942 -16821714 - NTS_DM Other Other -39 201 38 9 677 921 9 0 27 chrUextra 12182942 12183053 -16821603 - NTS_DM Other Other -107 133 26 9 677 1324 14 0 0 chrUextra 12183153 12183298 -16821358 + R1_DM LINE R1 5212 5356 0 9 677 4439 61 12 4 chrUextra 12183331 12183893 -16820763 + R1_DM LINE R1 1 567 -4789 9 677 6035 35 0 0 chrUextra 12183993 12184733 -16819923 + MDG1_I LTR Gypsy 4744 5483 -1113 9 677 730 0 0 0 chrUextra 12184833 12184913 -16819743 - NTS_DM Other Other -123 117 38 9 677 928 9 0 27 chrUextra 12184913 12185025 -16819631 - NTS_DM Other Other -107 133 25 9 677 22 56 0 0 chrUextra 12185052 12185088 -16819568 + AT_rich Low_complexity Low_complexity 1 36 0 9 677 277 176 0 19 chrUextra 12185101 12185153 -16819503 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 677 266 196 0 19 chrUextra 12185184 12185236 -16819420 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 677 266 196 0 19 chrUextra 12185276 12185328 -16819328 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 677 266 196 0 19 chrUextra 12185368 12185420 -16819236 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 677 486 0 0 0 chrUextra 12185521 12185573 -16819083 - LSU-rRNA_Dme rRNA rRNA 0 3900 3849 9 677 6315 32 3 1 chrUextra 12185673 12186413 -16818243 - R1_DM LINE R1 -2408 2948 2208 9 677 6727 8 0 0 chrUextra 12186513 12187253 -16817403 - R1_DM LINE R1 -1570 3786 3047 9 677 6788 5 1 1 chrUextra 12187353 12188093 -16816563 + Gypsy6_I LTR Gypsy 4027 4766 -2246 9 677 664 42 0 30 chrUextra 12188815 12188914 -16815742 - ALUII_DM Unknown Unknown 0 240 145 9 677 23 0 0 0 chrUextra 12189289 12189312 -16815344 + AT_rich Low_complexity Low_complexity 1 23 0 9 678 5258 5 3 0 chrUextra 12189873 12190460 -16814196 - MAX_I LTR Pao -7325 589 1 9 678 1429 7 0 0 chrUextra 12190460 12190613 -16814043 - MAX_LTR LTR Pao 0 321 169 9 678 6624 3 0 12 chrUextra 12190713 12191453 -16813203 + DOC LINE Jockey 290 1020 -3705 9 678 5344 92 34 0 chrUextra 12191553 12192292 -16812364 + Invader1_I LTR Gypsy 2097 2860 -326 9 678 2982 254 14 5 chrUextra 12192397 12193133 -16811523 + Gypsy6_I LTR Gypsy 2349 3090 -3922 9 678 736 98 9 0 chrUextra 12193233 12193345 -16811311 - ARS406_DM Unknown Unknown -240 113 1 9 678 3347 179 8 11 chrUextra 12193252 12193973 -16810683 + SAR_DM Satellite Satellite 195 913 -559 9 678 405 189 30 40 chrUextra 12195552 12195651 -16809005 + Gypsy_LTR LTR Gypsy 1 98 -384 9 678 1658 332 9 20 chrUextra 12195753 12196490 -16808166 - MICROPIA_I LTR Gypsy -583 3893 3165 9 678 2575 0 0 0 chrUextra 12197060 12197333 -16807323 - ROO_LTR LTR Pao 0 428 156 9 678 6207 14 5 1 chrUextra 12197433 12198173 -16806483 + PROTOP DNA P 3409 4151 -329 9 678 6324 11 42 1 chrUextra 12198273 12199013 -16805643 + R1_DM LINE R1 462 1231 -4125 9 678 5390 2 0 0 chrUextra 12199113 12199690 -16804966 - LSU-rRNA_Dme rRNA rRNA -684 3216 2640 9 678 1554 0 0 0 chrUextra 12199688 12199853 -16804803 - R1_DM LINE R1 0 5356 5192 9 678 2775 158 17 12 chrUextra 12199953 12200482 -16804174 - SAR_DM Satellite Satellite -550 741 67 9 678 1082 94 0 0 chrUextra 12200482 12200641 -16804015 + ARS406_DM Unknown Unknown 31 189 -164 9 678 2775 158 17 12 chrUextra 12200641 12200691 -16803965 - SAR_DM Satellite Satellite -550 66 1 9 678 6819 3 0 1 chrUextra 12200793 12201533 -16803123 - DOC LINE Jockey -238 4487 3749 9 678 6753 7 0 0 chrUextra 12201633 12202373 -16802283 + R1_DM LINE R1 2219 2958 -2398 9 678 6403 23 0 9 chrUextra 12202476 12203213 -16801443 + R1_DM LINE R1 1590 2319 -3037 9 678 5676 43 16 19 chrUextra 12203313 12204053 -16800603 - NOMAD_I LTR Gypsy -270 6302 5565 9 678 6454 28 1 0 chrUextra 12204153 12204893 -16799763 - R1_DM LINE R1 -149 5207 4467 9 678 4291 0 0 2 chrUextra 12204993 12205455 -16799201 - DOC LINE Jockey -4248 477 17 9 678 5699 0 0 37 chrUextra 12205833 12206504 -16798152 - LSU-rRNA_Dme rRNA rRNA -3254 646 1 9 678 360 48 0 0 chrUextra 12206673 12206715 -16797941 - R1_DM LINE R1 -72 5284 5243 9 678 6078 29 1 1 chrUextra 12206712 12207413 -16797243 - R1_DM LINE R1 -290 5066 4366 9 678 6523 22 8 0 chrUextra 12207513 12208253 -16796403 + R1_DM LINE R1 1610 2355 -3001 9 678 6508 19 3 1 chrUextra 12208353 12209093 -16795563 + R1_DM LINE R1 3769 4509 -847 9 678 6273 30 0 8 chrUextra 12210873 12211613 -16793043 + STALKER4_I LTR Gypsy 4140 4873 -1657 9 678 858 0 11 0 chrUextra 12211713 12211808 -16792848 + LSU-rRNA_Dme rRNA rRNA 3805 3900 0 9 678 25 0 0 0 chrUextra 12211880 12211905 -16792751 + AT_rich Low_complexity Low_complexity 1 25 0 9 678 241 163 0 58 chrUextra 12211907 12211959 -16792697 + LSU-rRNA_Dme rRNA rRNA 2570 2618 -1282 9 678 241 163 0 58 chrUextra 12212007 12212059 -16792597 + LSU-rRNA_Dme rRNA rRNA 2570 2618 -1282 9 678 25 0 0 0 chrUextra 12212078 12212103 -16792553 + AT_rich Low_complexity Low_complexity 1 25 0 9 678 266 196 0 19 chrUextra 12212105 12212157 -16792499 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 678 255 196 0 19 chrUextra 12212197 12212249 -16792407 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 678 266 196 0 19 chrUextra 12212289 12212341 -16792315 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 678 276 154 273 15 chrUextra 12212372 12212438 -16792218 + LSU-rRNA_Dme rRNA rRNA 2570 2652 -1248 9 678 4317 4 0 0 chrUextra 12212553 12213023 -16791633 + LSU-rRNA_Dme rRNA rRNA 2113 2582 -1318 9 678 2466 4 0 0 chrUextra 12213026 12213293 -16791363 + R2_DM LINE R2 2081 2347 -1260 9 678 6576 4 3 0 chrUextra 12213393 12214133 -16790523 + DM297_I LTR Gypsy 4697 5438 -729 9 678 487 108 26 13 chrUextra 12214233 12214381 -16790275 - RSP Satellite Satellite -64 149 1 9 678 6452 19 11 5 chrUextra 12215074 12215813 -16788843 - Gypsy2_I LTR Gypsy -3381 2754 2012 9 678 993 122 0 0 chrUextra 12215913 12216060 -16788596 + TART LINE telomeric 3723 3869 -10608 9 678 3758 108 3 36 chrUextra 12216069 12216653 -16788003 + TART LINE telomeric 5332 5896 -8581 9 678 2510 7 0 3 chrUextra 12216753 12217053 -16787603 + DOC LINE Jockey 4427 4725 0 9 678 596 329 16 16 chrUextra 12217054 12217440 -16787216 + HMSBEAGLE_I LTR Gypsy 5000 5385 -1144 9 678 435 90 0 29 chrUextra 12217593 12217662 -16786994 + BATUMI_I LTR Pao 6685 6751 -1212 9 678 4645 35 2 12 chrUextra 12217655 12218227 -16786429 - BATUMI_I LTR Pao -4489 3474 2909 9 678 932 9 9 9 chrUextra 12218225 12218333 -16786323 - BATUMI_I LTR Pao -5715 2248 2141 9 678 3409 184 9 11 chrUextra 12218433 12219173 -16785483 + SAR_DM Satellite Satellite 268 1006 -466 9 678 22 35 0 0 chrUextra 12219273 12219302 -16785354 + AT_rich Low_complexity Low_complexity 1 29 0 9 678 802 186 23 125 chrUextra 12219360 12219624 -16785032 - Gypsy3_LTR LTR Gypsy -161 237 1 9 678 1650 214 1 1 chrUextra 12219627 12219961 -16784695 - Gypsy3_I LTR Gypsy -21 6156 5821 9 678 6607 16 1 0 chrUextra 12220113 12220853 -16783803 - DIVER_I LTR Pao -1061 4582 3842 9 678 3244 181 11 17 chrUextra 12220953 12221668 -16782988 - SAR_DM Satellite Satellite -571 901 191 9 678 636 180 0 8 chrUextra 12221570 12221693 -16782963 + ARS406_DM Unknown Unknown 1 122 -231 9 678 1332 18 0 6 chrUextra 12221840 12222005 -16782651 - NTS_DM Other Other -39 201 38 9 678 928 9 0 27 chrUextra 12222005 12222117 -16782539 - NTS_DM Other Other -107 133 25 9 678 22 56 0 0 chrUextra 12222143 12222179 -16782477 + AT_rich Low_complexity Low_complexity 1 36 0 9 678 277 176 0 19 chrUextra 12222192 12222244 -16782412 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 678 266 196 0 19 chrUextra 12222275 12222327 -16782329 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 678 262 150 0 0 chrUextra 12222367 12222407 -16782249 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 678 27 29 0 0 chrUextra 12222412 12222446 -16782210 + AT_rich Low_complexity Low_complexity 1 34 0 9 678 232 143 0 0 chrUextra 12222655 12222690 -16781966 + HETRP_DM Satellite Satellite 1600 1634 -238 9 678 838 171 12 19 chrUextra 12222738 12222899 -16781757 + HETRP_DM Satellite Satellite 1516 1675 -197 9 678 238 208 0 19 chrUextra 12222951 12223005 -16781651 + HETRP_DM Satellite Satellite 1580 1632 -240 9 678 328 174 250 42 chrUextra 12223052 12223148 -16781508 + HETRP_DM Satellite Satellite 1519 1634 -238 9 678 838 171 12 19 chrUextra 12223196 12223357 -16781299 + HETRP_DM Satellite Satellite 1516 1675 -197 9 678 2299 118 11 48 chrUextra 12223477 12224193 -16780463 - DMSAT6 Satellite Satellite -37 690 1 9 678 21 57 0 0 chrUextra 12224535 12224570 -16780086 + AT_rich Low_complexity Low_complexity 1 35 0 9 678 827 10 0 0 chrUextra 12225153 12225249 -16779407 - Copia_I LTR Copia -4497 96 1 9 678 2377 4 0 0 chrUextra 12225249 12225525 -16779131 - Copia_LTR LTR Copia 0 276 1 9 678 2498 75 133 18 chrUextra 12225525 12225893 -16778763 + TART LINE telomeric 7300 7711 -6766 9 678 2067 8 0 0 chrUextra 12226099 12226339 -16778317 - ALUII_DM Unknown Unknown 0 240 1 9 678 21 57 0 0 chrUextra 12226339 12226374 -16778282 + AT_rich Low_complexity Low_complexity 1 35 0 9 678 22 35 0 0 chrUextra 12226571 12226600 -16778056 + AT_rich Low_complexity Low_complexity 1 29 0 9 678 25 31 0 0 chrUextra 12226701 12226733 -16777923 + AT_rich Low_complexity Low_complexity 1 32 0 9 678 2904 210 16 15 chrUextra 12226834 12227573 -16777083 - SAR_DM Satellite Satellite -677 739 1 9 678 6759 3 1 0 chrUextra 12227673 12228413 -16776243 + Copia2_I LTR Copia 3060 3800 -362 9 678 6507 3 0 0 chrUextra 12228513 12229253 -16775403 - ROVER-I_DM LTR Gypsy -1836 4748 4009 9 678 1621 236 45 54 chrUextra 12229357 12230093 -16774563 + SAR_DM Satellite Satellite 1 729 -396 9 678 2381 207 28 55 chrUextra 12230193 12230933 -16773723 + TAHRE LINE telomeric 7185 7904 -2559 9 678 1906 23 0 0 chrUextra 12231033 12231253 -16773403 - BATUMI_I LTR Pao -7743 220 1 9 678 1871 53 37 26 chrUextra 12231253 12231522 -16773134 - BATUMI_LTR LTR Pao 0 272 1 9 678 1510 47 42 5 chrUextra 12232715 12232928 -16771728 + TART_B1 LINE telomeric 3418 3638 -7016 9 678 3765 103 0 2 chrUextra 12232928 12233452 -16771204 + TART_B1 LINE telomeric 4264 4786 -5868 9 678 700 167 0 14 chrUextra 12233553 12233693 -16770963 - ARS406_DM Unknown Unknown -215 138 1 9 678 2964 182 17 24 chrUextra 12233584 12234293 -16770363 + SAR_DM Satellite Satellite 180 883 -589 9 678 6134 4 3 0 chrUextra 12234393 12235076 -16769580 - R1_DM LINE R1 -4671 685 1 9 678 254 30 30 0 chrUextra 12235076 12235109 -16769547 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2599 9 678 255 0 0 0 chrUextra 12235104 12235133 -16769523 - LSU-rRNA_Dme rRNA rRNA -1247 2653 2625 9 678 25 48 0 46 chrUextra 12235471 12235536 -16769120 + AT_rich Low_complexity Low_complexity 1 62 0 9 678 1041 310 75 19 chrUextra 12236080 12236653 -16768003 - Invader3_I LTR Gypsy -915 3973 3369 9 678 233 256 11 55 chrUextra 12236648 12236739 -16767917 - PROTOP_B DNA P -605 548 462 9 678 5715 23 1 0 chrUextra 12236913 12237573 -16767083 - R1_DM LINE R1 -3018 2338 1678 9 678 652 24 0 0 chrUextra 12237570 12237653 -16767003 - R1_DM LINE R1 -4389 967 885 9 678 1121 15 0 62 chrUextra 12237784 12237928 -16766728 + 5S_DM RNA RNA 1 135 0 9 678 1231 0 0 0 chrUextra 12238152 12238287 -16766369 + 5S_DM RNA RNA 1 135 0 9 678 6273 22 27 0 chrUextra 12238593 12239333 -16765323 - FW_DM LINE Jockey -685 4007 3248 9 678 5973 46 4 1 chrUextra 12239433 12240173 -16764483 - Stalker2_I LTR Gypsy -2866 4536 3795 9 678 3873 0 23 2 chrUextra 12240273 12240715 -16763941 - G_DM LINE Jockey -3895 451 1 9 678 242 103 25 25 chrUextra 12240788 12240828 -16763828 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 678 237 175 0 0 chrUextra 12240880 12240920 -16763736 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 678 251 186 0 0 chrUextra 12240969 12241012 -16763644 + LSU-rRNA_Dme rRNA rRNA 2578 2620 -1280 9 678 3531 164 11 12 chrUextra 12241113 12241853 -16762803 - SAR_DM Satellite Satellite -435 1037 299 9 678 3317 174 14 26 chrUextra 12241953 12242686 -16761970 + SAR_DM Satellite Satellite 380 1103 -369 9 678 230 111 0 62 chrUextra 12242645 12242693 -16761963 - XDMR Unknown Unknown 0 361 317 9 678 6594 9 8 0 chrUextra 12242793 12243533 -16761123 + Gypsy4_I LTR Gypsy 545 1290 -4998 9 678 6676 7 0 0 chrUextra 12243633 12244373 -16760283 - DIVER_I LTR Pao -1778 3865 3126 9 678 6410 3 7 0 chrUextra 12244473 12245213 -16759443 + BLOOD_I LTR Gypsy 2592 3336 -3277 9 678 954 0 0 0 chrUextra 12245313 12245423 -16759233 - Copia_I LTR Copia -4483 110 1 9 678 2377 4 0 0 chrUextra 12245423 12245699 -16758957 - Copia_LTR LTR Copia 0 276 1 9 678 3127 3 0 0 chrUextra 12245707 12246053 -16758603 + MDG3_I LTR Gypsy 807 1152 -3834 9 678 6689 4 1 0 chrUextra 12246153 12246893 -16757763 - DM1731_I LTR Copia -725 3251 2511 9 678 3046 182 18 26 chrUextra 12247001 12247733 -16756923 - SAR_DM Satellite Satellite -300 1172 447 9 678 6586 1 1 4 chrUextra 12247835 12248573 -16756083 + LSU-rRNA_Dme rRNA rRNA 773 1508 -2392 9 678 273 98 0 0 chrUextra 12249205 12249246 -16755410 + (TC)n Simple_repeat Simple_repeat 1 41 0 9 678 6159 30 3 1 chrUextra 12249513 12250253 -16754403 - R1_DM LINE R1 -1409 3947 3207 9 678 6609 3 18 0 chrUextra 12250353 12251093 -16753563 + MDG3_I LTR Gypsy 200 952 -4034 9 678 723 116 0 8 chrUextra 12251193 12251315 -16753341 - ARS406_DM Unknown Unknown -232 121 1 9 678 3226 176 17 8 chrUextra 12251221 12251924 -16752732 + SAR_DM Satellite Satellite 195 903 -569 9 678 6754 3 1 0 chrUextra 12252033 12252773 -16751883 + SSU-rRNA_Dme rRNA rRNA 173 913 -1082 9 678 3617 171 6 6 chrUextra 12252878 12253600 -16751056 - SAR_DM Satellite Satellite -425 1047 326 9 678 2269 0 4 0 chrUextra 12253713 12253962 -16750694 + SSU-rRNA_Dme rRNA rRNA 1746 1995 0 9 678 21 89 0 0 chrUextra 12253981 12254037 -16750619 + AT_rich Low_complexity Low_complexity 1 56 0 9 678 6157 9 3 0 chrUextra 12254556 12255293 -16749363 + IDEFIX_I LTR Gypsy 3686 4424 -1204 9 678 6182 3 0 4 chrUextra 12255393 12256081 -16748575 + LSU-rRNA_Dme rRNA rRNA 1979 2663 -1237 9 678 291 0 0 0 chrUextra 12256099 12256133 -16748523 + R1_DM LINE R1 1 34 -5322 9 678 607 283 45 24 chrUextra 12256628 12256971 -16747685 - Invader1_I LTR Gypsy -617 2569 2310 9 678 1399 16 134 0 chrUextra 12257073 12257267 -16747389 - PROTOP_B DNA P -463 690 471 9 678 3310 57 117 0 chrUextra 12257266 12257813 -16746843 - PROTOP_B DNA P -404 749 158 9 678 5383 0 0 2 chrUextra 12257913 12258529 -16746127 - ROO_I LTR Pao -2905 5351 4737 9 678 1056 0 0 0 chrUextra 12258529 12258653 -16746003 - ROO_I LTR Pao -4126 4130 4007 9 678 820 0 0 0 chrUextra 12258753 12258845 -16745811 - NTS_DM Other Other -111 129 38 9 678 907 9 0 27 chrUextra 12258845 12258957 -16745699 - NTS_DM Other Other -107 133 25 9 678 22 56 0 0 chrUextra 12258983 12259019 -16745637 + AT_rich Low_complexity Low_complexity 1 36 0 9 678 269 125 0 0 chrUextra 12259032 12259072 -16745584 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 678 262 150 0 0 chrUextra 12259115 12259155 -16745501 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 678 231 140 233 50 chrUextra 12259194 12259254 -16745402 - LSU-rRNA_Dme rRNA rRNA -1249 2651 2581 9 678 262 150 0 0 chrUextra 12259306 12259346 -16745310 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 678 27 29 0 0 chrUextra 12259351 12259385 -16745271 + AT_rich Low_complexity Low_complexity 1 34 0 9 678 231 105 0 50 chrUextra 12259404 12259444 -16745212 - LSU-rRNA_Dme rRNA rRNA -1282 2618 2581 9 678 22 56 0 0 chrUextra 12259449 12259485 -16745171 + AT_rich Low_complexity Low_complexity 1 36 0 9 678 6518 0 0 4 chrUextra 12259593 12260333 -16744323 + LSU-rRNA_Dme rRNA rRNA 462 1198 -2702 9 678 6720 4 0 0 chrUextra 12260433 12261173 -16743483 - DMRT1B LINE R1 -1164 4019 3280 9 678 263 106 21 0 chrUextra 12261273 12261320 -16743336 - ARS406_DM Unknown Unknown -305 48 1 9 678 3307 178 11 12 chrUextra 12261281 12262010 -16742646 + SAR_DM Satellite Satellite 246 973 -499 9 678 6026 1 0 36 chrUextra 12262113 12262843 -16741813 - LSU-rRNA_Dme rRNA rRNA -3196 704 1 9 678 32 0 0 0 chrUextra 12263027 12263059 -16741597 + AT_rich Low_complexity Low_complexity 1 32 0 9 678 4481 6 0 4 chrUextra 12263191 12263693 -16740963 + SSU-rRNA_Dme rRNA rRNA 1 500 -1495 9 678 1964 173 220 45 chrUextra 12263793 12264460 -16740196 + TART LINE telomeric 9696 10479 -3998 9 678 34 24 0 0 chrUextra 12264479 12264520 -16740136 + AT_rich Low_complexity Low_complexity 1 41 0 9 678 1971 182 5 7 chrUextra 12264633 12265372 -16739284 + SAR_DM Satellite Satellite 1 737 -558 9 678 3155 187 17 21 chrUextra 12265474 12266211 -16738445 + SAR_DM Satellite Satellite 1 734 -207 9 678 6599 1 4 3 chrUextra 12266311 12267048 -16737608 - SSU-rRNA_Dme rRNA rRNA -703 1292 555 9 678 259 128 0 21 chrUextra 12267455 12267503 -16737153 - HMSBEAGLE_I LTR Gypsy -6308 221 175 9 678 241 149 0 21 chrUextra 12267748 12267796 -16736860 - HMSBEAGLE_I LTR Gypsy -6308 221 175 9 678 684 13 0 0 chrUextra 12267989 12268065 -16736591 - NTS_DM Other Other -164 76 1 9 678 1835 17 17 17 chrUextra 12268065 12268305 -16736351 - NTS_DM Other Other 0 240 1 9 678 1835 17 17 17 chrUextra 12268305 12268545 -16736111 - NTS_DM Other Other 0 240 1 9 678 1228 28 22 22 chrUextra 12268545 12268728 -16735928 - NTS_DM Other Other 0 240 58 9 678 809 11 0 0 chrUextra 12268828 12268918 -16735738 - NTS_DM Other Other -150 90 1 9 678 1764 25 17 21 chrUextra 12268918 12269159 -16735497 - NTS_DM Other Other 0 240 1 9 678 1835 17 17 17 chrUextra 12269159 12269399 -16735257 - NTS_DM Other Other 0 240 1 9 678 1059 31 30 24 chrUextra 12269399 12269565 -16735091 - NTS_DM Other Other 0 240 74 9 678 2364 168 123 20 chrUextra 12269697 12270288 -16734368 - HETA LINE telomeric -564 5517 4866 9 678 543 90 8 160 chrUextra 12270287 12270406 -16734250 - TAHRE LINE telomeric -3269 7194 7094 9 678 3619 164 9 11 chrUextra 12270506 12271245 -16733411 + SAR_DM Satellite Satellite 296 1033 -439 9 678 1840 176 50 19 chrUextra 12272184 12272923 -16731733 - SAR_DM Satellite Satellite -673 762 1 9 678 6686 0 0 0 chrUextra 12273024 12273762 -16730894 + FW_DM LINE Jockey 2951 3688 -1004 9 678 6071 45 1 3 chrUextra 12274701 12275440 -16729216 - R1_DM LINE R1 -3555 1801 1064 9 678 6576 1 0 0 chrUextra 12275540 12276279 -16728377 + ROO_I LTR Pao 5450 6188 -2068 9 678 6586 8 0 0 chrUextra 12276379 12277118 -16727538 - IDEFIX_I LTR Gypsy -3485 2143 1405 9 678 2964 185 31 16 chrUextra 12277219 12277928 -16726728 - SAR_DM Satellite Satellite -558 914 195 9 678 689 139 0 8 chrUextra 12277834 12277957 -16726699 + ARS406_DM Unknown Unknown 1 122 -231 9 678 3222 174 19 24 chrUextra 12278058 12278796 -16725860 - SAR_DM Satellite Satellite -493 979 246 9 678 28 48 0 0 chrUextra 12279554 12279596 -16725060 + AT_rich Low_complexity Low_complexity 1 42 0 9 678 2637 60 11 3 chrUextra 12279735 12280084 -16724572 - IDEFIX_I LTR Gypsy -4732 896 545 9 678 1949 28 49 0 chrUextra 12280096 12280343 -16724313 - IDEFIX_I LTR Gypsy -5369 259 1 9 678 5869 27 15 5 chrUextra 12280574 12281313 -16723343 + PROTOP_A DNA P 279 1024 -81 9 678 6142 1 0 34 chrUextra 12281413 12282152 -16722504 + LSU-rRNA_Dme rRNA rRNA 129 842 -3058 9 678 6464 9 0 0 chrUextra 12282252 12282991 -16721665 - Invader3_I LTR Gypsy -2401 2487 1749 9 678 6163 12 5 1 chrUextra 12283091 12283830 -16720826 - PROTOP DNA P -539 3941 3200 9 678 2063 4 0 4 chrUextra 12283930 12284168 -16720488 - FW_DM LINE Jockey -486 4206 3970 9 678 4419 4 0 0 chrUextra 12284176 12284669 -16719987 - FW_DM LINE Jockey -976 3716 3224 9 678 2097 207 28 57 chrUextra 12284770 12285314 -16719342 - Gypsy12_LTR LTR Gypsy -1796 540 13 9 678 1346 83 0 11 chrUextra 12285326 12285508 -16719148 - Gypsy12_I LTR Gypsy 0 5546 5367 9 678 356 200 10 20 chrUextra 12285608 12285710 -16718946 + XDMR_DM Unknown Unknown 260 360 0 9 678 3216 178 8 21 chrUextra 12285624 12286343 -16718313 - SAR_DM Satellite Satellite -354 1118 409 9 678 21 36 0 0 chrUextra 12286451 12286479 -16718177 + AT_rich Low_complexity Low_complexity 1 28 0 9 678 21 57 0 0 chrUextra 12286676 12286711 -16717945 + AT_rich Low_complexity Low_complexity 1 35 0 9 678 2058 8 0 0 chrUextra 12286711 12286951 -16717705 + ALUII_DM Unknown Unknown 1 240 0 9 678 3209 172 20 23 chrUextra 12287287 12288024 -16716632 - SAR_DM Satellite Satellite -313 1159 425 9 678 6284 19 22 0 chrUextra 12288132 12288864 -16715792 - R1_DM LINE R1 -2940 2416 1669 9 678 288 176 0 0 chrUextra 12288968 12289036 -16715620 + (CATAA)n Simple_repeat Simple_repeat 2 69 0 9 678 2134 206 68 52 chrUextra 12289846 12290542 -16714114 + Gypsy12_LTR LTR Gypsy 831 1537 -799 9 678 457 169 0 12 chrUextra 12290642 12290726 -16713930 - HETRP_DM Satellite Satellite -261 1611 1529 9 678 697 181 18 61 chrUextra 12290884 12291049 -16713607 - HETRP_DM Satellite Satellite -197 1675 1518 9 678 680 193 7 14 chrUextra 12291166 12291308 -16713348 - HETRP_DM Satellite Satellite -203 1669 1529 9 678 895 300 35 42 chrUextra 12291482 12291913 -16712743 - FROGGER_I LTR Copia -1243 834 407 9 678 6545 12 0 0 chrUextra 12292322 12293059 -16711597 + Gypsy4_I LTR Gypsy 1103 1839 -4449 9 678 1951 179 65 97 chrUextra 12293169 12293898 -16710758 - HETA LINE telomeric -5184 897 193 9 678 2173 178 55 29 chrUextra 12293998 12294512 -16710144 - Stalker2_I LTR Gypsy -6585 817 291 9 678 28 48 0 0 chrUextra 12294519 12294561 -16710095 + AT_rich Low_complexity Low_complexity 1 42 0 9 678 266 172 0 33 chrUextra 12294649 12294709 -16709947 - Stalker3_LTR LTR Gypsy 0 372 315 9 678 2982 0 0 0 chrUextra 12294837 12295175 -16709481 + FW_DM LINE Jockey 4355 4692 0 9 678 405 180 17 35 chrUextra 12295174 12295289 -16709367 - Gypsy2_I LTR Gypsy -5530 605 493 9 678 453 170 69 10 chrUextra 12295436 12295537 -16709119 - Gypsy2_LTR LTR Gypsy -147 206 100 9 678 37 39 0 0 chrUextra 12295762 12295813 -16708843 + AT_rich Low_complexity Low_complexity 1 51 0 9 678 22 35 0 0 chrUextra 12295914 12295943 -16708713 + AT_rich Low_complexity Low_complexity 1 29 0 9 678 254 192 41 0 chrUextra 12296140 12296213 -16708443 + (TTATA)n Simple_repeat Simple_repeat 5 80 0 9 678 3198 184 15 20 chrUextra 12296515 12297252 -16707404 - SAR_DM Satellite Satellite -468 1004 272 9 678 6138 23 0 0 chrUextra 12297354 12298093 -16706563 - ZAM_I LTR Gypsy -1473 6017 5279 9 678 566 146 73 51 chrUextra 12298193 12298330 -16706326 + TART LINE telomeric 7224 7363 -7114 9 678 2523 116 16 7 chrUextra 12298327 12298724 -16705932 + TART LINE telomeric 7403 7726 -6751 9 678 716 83 46 0 chrUextra 12298723 12298832 -16705824 + TART LINE telomeric 10224 10337 -4140 9 678 676 67 10 0 chrUextra 12298828 12298932 -16705724 + TAHRE LINE telomeric 10186 10290 -173 9 678 220 141 46 15 chrUextra 12299325 12299390 -16705266 + (TAA)n Simple_repeat Simple_repeat 2 68 0 9 678 21 89 0 0 chrUextra 12300119 12300175 -16704481 + AT_rich Low_complexity Low_complexity 1 56 0 9 678 3761 2 2 2 chrUextra 12300194 12300610 -16704046 - SSU-rRNA_Dme rRNA rRNA 0 1995 1580 9 678 21 0 0 0 chrUextra 12301791 12301812 -16702844 + AT_rich Low_complexity Low_complexity 1 21 0 9 678 1790 171 12 0 chrUextra 12302388 12302734 -16701922 - SAR_DM Satellite Satellite -587 885 536 9 678 2269 74 33 21 chrUextra 12302737 12303127 -16701529 + Gypsy6A_LTR LTR Gypsy 1 394 -26 9 678 26 30 0 0 chrUextra 12303781 12303814 -16700842 + AT_rich Low_complexity Low_complexity 1 33 0 9 678 1566 11 0 0 chrUextra 12304080 12304351 -16700305 + (GAGAA)n Simple_repeat Simple_repeat 1 271 0 9 678 6598 5 0 1 chrUextra 12304905 12305644 -16699012 + DMRT1B LINE R1 1942 2679 -2504 9 678 6252 9 1 0 chrUextra 12305745 12306483 -16698173 + STALKER4_I LTR Gypsy 2728 3466 -3064 9 678 6177 20 1 1 chrUextra 12306583 12307322 -16697334 + STALKER4_I LTR Gypsy 2234 2972 -3558 9 678 647 110 18 0 chrUextra 12307424 12307533 -16697123 - ARS406_DM Unknown Unknown -242 111 1 9 678 3034 184 18 14 chrUextra 12307443 12308161 -16696495 + SAR_DM Satellite Satellite 198 918 -554 9 678 909 61 9 0 chrUextra 12308261 12308376 -16696280 + R2_DM LINE R2 3470 3585 -22 9 678 191 32 65 0 chrUextra 12308376 12308407 -16696249 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 9 678 5153 12 0 7 chrUextra 12308407 12309000 -16695656 + LSU-rRNA_Dme rRNA rRNA 2584 3172 -728 9 678 393 316 19 25 chrUextra 12309110 12309269 -16695387 + Gypsy6_I LTR Gypsy 6854 7011 -1 9 678 1863 104 16 57 chrUextra 12309272 12309587 -16695069 + Gypsy6A_LTR LTR Gypsy 1 302 -118 9 678 1634 15 0 0 chrUextra 12309638 12309839 -16694817 + STALKER4_I LTR Gypsy 3181 3381 -3149 9 678 3239 193 8 14 chrUextra 12309939 12310678 -16693978 + SAR_DM Satellite Satellite 272 1006 -466 9 678 5065 26 5 2 chrUextra 12310778 12311382 -16693274 - DOC3_DM LINE Jockey -1130 3610 3005 9 678 1131 29 15 0 chrUextra 12311381 12311517 -16693139 - DOC3_DM LINE Jockey -1886 2854 2717 9 678 6554 5 0 1 chrUextra 12311619 12312356 -16692300 + IDEFIX_I LTR Gypsy 1625 2360 -3268 9 678 6095 24 4 1 chrUextra 12312456 12313195 -16691461 - ACCORD2_I LTR Gypsy -594 6618 5878 9 678 1278 0 0 0 chrUextra 12313296 12313436 -16691220 + LSU-rRNA_Dme rRNA rRNA 3761 3900 0 9 678 29 28 0 0 chrUextra 12313508 12313544 -16691112 + AT_rich Low_complexity Low_complexity 1 36 0 9 678 262 150 0 0 chrUextra 12313549 12313589 -16691067 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 678 262 150 0 0 chrUextra 12313641 12313681 -16690975 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 678 262 150 0 0 chrUextra 12313733 12313773 -16690883 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 678 262 150 0 0 chrUextra 12313825 12313865 -16690791 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 678 269 125 0 0 chrUextra 12313908 12313948 -16690708 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 678 22 56 0 0 chrUextra 12313961 12313997 -16690659 + AT_rich Low_complexity Low_complexity 1 36 0 9 678 4610 0 0 0 chrUextra 12314134 12314676 -16689980 + I_DM LINE I 4934 5475 -756 9 678 1580 0 0 6 chrUextra 12314690 12314871 -16689785 + (TATAA)n Simple_repeat Simple_repeat 1 180 0 9 678 453 179 0 69 chrUextra 12314973 12315075 -16689581 - HETRP_DM Satellite Satellite -260 1612 1518 9 678 720 186 14 7 chrUextra 12315186 12315332 -16689324 - HETRP_DM Satellite Satellite -197 1675 1529 9 678 518 216 16 16 chrUextra 12315460 12315587 -16689069 - HETRP_DM Satellite Satellite -197 1675 1549 9 678 192 40 0 0 chrUextra 12315587 12315612 -16689044 + (TC)n Simple_repeat Simple_repeat 2 26 0 9 678 328 174 250 42 chrUextra 12315834 12315930 -16688726 - HETRP_DM Satellite Satellite -238 1634 1519 9 678 238 208 0 19 chrUextra 12315977 12316031 -16688625 - HETRP_DM Satellite Satellite -240 1632 1580 9 678 838 171 12 19 chrUextra 12316083 12316244 -16688412 - HETRP_DM Satellite Satellite -197 1675 1516 9 678 328 174 250 42 chrUextra 12316292 12316388 -16688268 - HETRP_DM Satellite Satellite -238 1634 1519 9 678 238 208 0 19 chrUextra 12316435 12316489 -16688167 - HETRP_DM Satellite Satellite -240 1632 1580 9 678 2829 0 3 0 chrUextra 12316651 12316993 -16687663 - ROO_I LTR Pao -170 8086 7744 9 678 3396 2 2 0 chrUextra 12316993 12317390 -16687266 - ROO_I LTR Pao -1406 6850 6453 9 678 3345 184 23 14 chrUextra 12317490 12318229 -16686427 + SAR_DM Satellite Satellite 259 1004 -468 9 678 32 91 0 0 chrUextra 12318967 12319055 -16685601 + AT_rich Low_complexity Low_complexity 1 88 0 9 678 2964 173 35 20 chrUextra 12319171 12319907 -16684749 + SAR_DM Satellite Satellite 1 746 -300 9 678 6682 5 0 0 chrUextra 12320007 12320746 -16683910 - R2_DM LINE R2 -485 3122 2384 9 679 6383 12 1 1 chrUextra 12320846 12321585 -16683071 + DM297_I LTR Gypsy 2711 3449 -2718 9 679 1787 74 4 28 chrUextra 12321685 12321934 -16682722 + Baggins1 LINE LOA 4949 5191 -262 9 679 942 168 15 30 chrUextra 12322524 12322726 -16681930 - PROTOP_B DNA P -88 1065 867 9 679 2328 35 10 0 chrUextra 12322844 12323134 -16681522 - Gypsy7_I LTR Gypsy -1077 3907 3615 9 679 839 72 88 0 chrUextra 12323135 12323260 -16681396 - Gypsy7_I LTR Gypsy -1650 3334 3199 9 679 3042 154 28 25 chrUextra 12323397 12324044 -16680612 + SAR_DM Satellite Satellite 275 923 -549 9 679 233 40 0 0 chrUextra 12324052 12324102 -16680554 - DOC LINE Jockey 0 4725 4676 9 679 3700 28 0 31 chrUextra 12325193 12325644 -16679012 - Baggins1 LINE LOA 0 5453 5017 9 679 1113 30 0 8 chrUextra 12325648 12325780 -16678876 - Baggins1 LINE LOA -97 5356 5226 9 679 2736 183 15 68 chrUextra 12325882 12326619 -16678037 - SAR_DM Satellite Satellite -299 1173 476 9 679 3335 168 20 16 chrUextra 12326725 12327457 -16677199 + SAR_DM Satellite Satellite 224 958 -514 9 679 2756 176 69 15 chrUextra 12327562 12328295 -16676361 - SAR_DM Satellite Satellite -535 772 1 9 679 4474 18 10 0 chrUextra 12328397 12328911 -16675745 + R1_DM LINE R1 4838 5356 0 9 679 1237 88 11 21 chrUextra 12328950 12329136 -16675520 + R1_DM LINE R1 45 228 -5128 9 679 2729 28 11 0 chrUextra 12329236 12329588 -16675068 - DOC5_DM LINE Jockey -348 4334 3979 9 679 613 134 43 17 chrUextra 12329607 12329807 -16674849 - DMCR1A LINE CR1 -4010 460 365 9 679 246 191 0 0 chrUextra 12329874 12329921 -16674735 + DMCR1A LINE CR1 744 790 -3680 9 679 28 48 0 0 chrUextra 12330336 12330378 -16674278 + AT_rich Low_complexity Low_complexity 1 42 0 9 679 466 154 0 0 chrUextra 12330914 12330992 -16673664 + FW_DM LINE Jockey 2316 2393 -2299 9 679 914 127 7 0 chrUextra 12330993 12331135 -16673521 + FW_DM LINE Jockey 3570 3712 -980 9 679 2050 149 0 0 chrUextra 12331150 12331471 -16673185 + FW_DM LINE Jockey 3795 4115 -577 9 679 760 158 8 8 chrUextra 12331480 12331614 -16673042 + FW_DM LINE Jockey 4374 4507 -185 9 679 2970 51 50 0 chrUextra 12331753 12332251 -16672405 + PROTOP_A DNA P 573 1001 -104 9 679 6692 0 0 0 chrUextra 12332592 12333331 -16671325 - TIRANT_I LTR Gypsy -3951 3741 3003 9 679 6596 5 0 0 chrUextra 12333431 12334170 -16670486 + STALKER4_I LTR Gypsy 1628 2366 -4164 9 679 6173 18 3 0 chrUextra 12334270 12335009 -16669647 + STALKER4_I LTR Gypsy 3016 3756 -2774 9 679 3024 189 18 25 chrUextra 12335956 12336687 -16667969 - SAR_DM Satellite Satellite -300 1172 447 9 679 6661 1 0 0 chrUextra 12336787 12337526 -16667130 - MAX_I LTR Pao -5747 2167 1429 9 679 987 171 0 0 chrUextra 12337626 12338049 -16666607 + CT-rich Low_complexity Low_complexity 1 423 0 9 679 359 243 0 0 chrUextra 12338049 12338119 -16666537 + polypyrimidine Low_complexity Low_complexity 3 72 0 9 679 314 215 0 12 chrUextra 12338120 12338200 -16666456 + CT-rich Low_complexity Low_complexity 4 82 0 9 679 977 84 0 7 chrUextra 12338210 12338365 -16666291 + (TTCTCC)n Simple_repeat Simple_repeat 3 156 0 9 679 6206 16 0 15 chrUextra 12338465 12339204 -16665452 + IVK_DM LINE I 1487 2214 -3188 9 679 3391 180 10 7 chrUextra 12339316 12340037 -16664619 - SAR_DM Satellite Satellite -418 1054 332 9 679 2882 24 124 0 chrUextra 12340511 12340882 -16663774 + PROTOP DNA P 1 417 -4063 9 679 3534 170 11 8 chrUextra 12340986 12341721 -16662935 + SAR_DM Satellite Satellite 332 1068 -404 9 679 748 172 14 14 chrUextra 12341974 12342121 -16662535 + HETRP_DM Satellite Satellite 1529 1675 -197 9 679 707 212 7 7 chrUextra 12342279 12342426 -16662230 + HETRP_DM Satellite Satellite 1529 1675 -197 9 679 3031 3 6 0 chrUextra 12342660 12343006 -16661650 + DM176_I LTR Gypsy 3332 3679 -2741 9 679 3491 0 0 0 chrUextra 12343004 12343399 -16661257 + DM176_I LTR Gypsy 4297 4691 -1729 9 679 4728 75 15 3 chrUextra 12343499 12344233 -16660423 + DOC3_DM LINE Jockey 3033 3801 -924 9 679 22 56 0 0 chrUextra 12344376 12344412 -16660244 + AT_rich Low_complexity Low_complexity 1 36 0 9 679 5408 0 3 0 chrUextra 12344484 12345077 -16659579 - LSU-rRNA_Dme rRNA rRNA 0 3900 3306 9 679 6729 3 1 0 chrUextra 12345177 12345916 -16658740 - SSU-rRNA_Dme rRNA rRNA -1239 756 17 9 679 4349 0 2 0 chrUextra 12346016 12346492 -16658164 + LSU-rRNA_Dme rRNA rRNA 3424 3900 0 9 679 29 28 0 0 chrUextra 12346564 12346600 -16658056 + AT_rich Low_complexity Low_complexity 1 36 0 9 679 262 150 0 0 chrUextra 12346605 12346645 -16658011 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 679 236 175 0 0 chrUextra 12346697 12346737 -16657919 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 679 21 89 0 0 chrUextra 12347117 12347173 -16657483 + AT_rich Low_complexity Low_complexity 1 56 0 9 679 3632 2 2 2 chrUextra 12347192 12347594 -16657062 - SSU-rRNA_Dme rRNA rRNA 0 1995 1594 9 679 3412 24 7 9 chrUextra 12347694 12348124 -16656532 - DM176_I LTR Gypsy -5991 429 1 9 679 2104 30 15 4 chrUextra 12348124 12348394 -16656262 - DM176_LTR LTR Gypsy 0 507 179 9 679 477 18 0 0 chrUextra 12348378 12348433 -16656223 - DM176_LTR LTR Gypsy -224 283 229 9 679 6303 32 1 0 chrUextra 12349372 12350111 -16654545 - R1_DM LINE R1 -2750 2606 1867 9 679 5853 46 43 3 chrUextra 12350211 12350950 -16653706 + R1_DM LINE R1 1087 1855 -3501 9 679 6311 24 1 1 chrUextra 12351050 12351789 -16652867 - R1_DM LINE R1 -867 4489 3751 9 679 5721 25 7 3 chrUextra 12351889 12352565 -16652091 + R1_DM LINE R1 4678 5356 0 9 679 254 0 0 0 chrUextra 12352598 12352628 -16652028 + R1_DM LINE R1 1 30 -5326 9 679 6684 3 0 0 chrUextra 12352728 12353467 -16651189 + LSU-rRNA_Dme rRNA rRNA 2319 3057 -843 9 679 1687 24 14 5 chrUextra 12353569 12353782 -16650874 - NTS_DM Other Other -25 215 1 9 679 1835 17 17 17 chrUextra 12353782 12354022 -16650634 - NTS_DM Other Other 0 240 1 9 679 1817 21 17 17 chrUextra 12354022 12354262 -16650394 - NTS_DM Other Other 0 240 1 9 679 232 0 91 68 chrUextra 12354262 12354306 -16650350 - NTS_DM Other Other 0 240 196 9 679 876 71 79 0 chrUextra 12354415 12354541 -16650115 - Gypsy7_I LTR Gypsy -1650 3334 3199 9 679 1413 292 21 63 chrUextra 12354539 12355145 -16649511 + MICROPIA_I LTR Gypsy 1414 1994 -2482 9 679 6678 1 4 1 chrUextra 12355245 12355984 -16648672 + LSU-rRNA_Dme rRNA rRNA 2764 3504 -396 9 679 6190 1 0 3 chrUextra 12356084 12356823 -16647833 + DM412 LTR Gypsy 1302 2038 -4859 9 679 3456 237 31 24 chrUextra 12356934 12358165 -16646491 + SAR_DM Satellite Satellite 1 1240 -418 9 679 472 116 0 34 chrUextra 12358114 12358199 -16646457 - ARS406_DM Unknown Unknown -164 189 108 9 679 2163 66 44 20 chrUextra 12358199 12358494 -16646162 - Gypsy6A_LTR LTR Gypsy 0 420 119 9 679 550 224 75 0 chrUextra 12358729 12358876 -16645780 + HETRP_DM Satellite Satellite 1518 1675 -197 9 679 798 170 32 19 chrUextra 12359015 12359171 -16645485 + HETRP_DM Satellite Satellite 1518 1675 -197 9 679 929 143 12 6 chrUextra 12359178 12359340 -16645316 - HOBO DNA hAT 0 3016 2854 9 679 3502 0 5 0 chrUextra 12359440 12359836 -16644820 - ROO_I LTR Pao -7858 398 1 9 679 3160 0 0 0 chrUextra 12359836 12360179 -16644477 - ROO_LTR LTR Pao 0 428 86 9 679 3763 32 4 11 chrUextra 12360279 12360751 -16643905 - BATUMI_I LTR Pao -4586 3377 2909 9 679 1966 42 63 15 chrUextra 12360749 12361018 -16643638 - BATUMI_I LTR Pao -5715 2248 1967 9 679 2234 175 11 9 chrUextra 12361118 12361856 -16642800 - SAR_DM Satellite Satellite -663 739 1 9 679 3394 174 8 12 chrUextra 12361956 12362688 -16641968 - SAR_DM Satellite Satellite -549 923 195 9 679 5649 56 0 0 chrUextra 12362794 12363532 -16641124 + IDEFIX_I LTR Gypsy 3456 4193 -1435 9 679 400 248 46 15 chrUextra 12363635 12363766 -16640890 + XDMR_DM Unknown Unknown 219 353 -7 9 679 2750 202 29 15 chrUextra 12363651 12364370 -16640286 - SAR_DM Satellite Satellite -308 1164 436 9 679 2018 139 8 153 chrUextra 12364470 12365208 -16639448 - TAHRE LINE telomeric -2888 7575 7044 9 679 1239 114 54 18 chrUextra 12365309 12365532 -16639124 - MDG1_I LTR Gypsy -6365 231 1 9 679 1968 94 74 3 chrUextra 12365532 12365830 -16638826 - MDG1_LTR LTR Gypsy -30 412 94 9 679 339 105 0 0 chrUextra 12365832 12365889 -16638767 + (TTA)n Simple_repeat Simple_repeat 3 59 0 9 679 2000 37 4 0 chrUextra 12366642 12366884 -16637772 - DIVER2_LTR LTR Pao 0 385 143 9 679 6427 4 0 0 chrUextra 12366984 12367722 -16636934 - ROO_I LTR Pao -3085 5171 4434 9 679 4174 55 16 2 chrUextra 12367826 12368377 -16636279 + R1_DM LINE R1 679 1237 -4119 9 679 244 59 0 0 chrUextra 12368350 12368384 -16636272 + R1_DM LINE R1 1357 1390 -3966 9 679 1153 36 0 6 chrUextra 12368394 12368560 -16636096 - FW_DM LINE Jockey 0 4692 4528 9 679 6510 0 0 0 chrUextra 12368660 12369398 -16635258 - ROO_I LTR Pao -1350 6906 6169 9 679 4243 60 54 27 chrUextra 12369498 12370131 -16634525 - MAX_I LTR Pao -6048 1866 1217 9 679 534 51 316 0 chrUextra 12370131 12370229 -16634427 - MAX_I LTR Pao -6586 1328 1200 9 679 6794 1 0 0 chrUextra 12370336 12371074 -16633582 + BEL_I LTR Pao 2664 3401 -2003 9 679 28 48 0 0 chrUextra 12371306 12371348 -16633308 + AT_rich Low_complexity Low_complexity 1 42 0 9 679 514 119 36 0 chrUextra 12371621 12371705 -16632951 - NTS_DM Other Other -150 90 4 9 679 661 21 0 31 chrUextra 12371815 12371912 -16632744 - NTS_DM Other Other -78 162 69 9 679 1114 0 26 19 chrUextra 12372012 12372166 -16632490 + NTS_DM Other Other 86 240 0 9 679 1892 4 17 17 chrUextra 12372166 12372406 -16632250 + NTS_DM Other Other 1 240 0 9 679 1882 4 17 17 chrUextra 12372406 12372646 -16632010 + NTS_DM Other Other 1 240 0 9 679 831 48 0 0 chrUextra 12372646 12372750 -16631906 + NTS_DM Other Other 1 104 -136 9 679 2280 183 12 16 chrUextra 12372850 12373586 -16631070 - SAR_DM Satellite Satellite -737 733 1 9 679 6702 4 0 0 chrUextra 12373688 12374426 -16630230 + DIVER_I LTR Pao 2355 3092 -2551 9 679 2774 211 35 5 chrUextra 12374526 12375264 -16629392 + SAR_DM Satellite Satellite 274 1033 -439 9 679 6317 23 0 0 chrUextra 12375364 12376102 -16628554 + ACCORD2_I LTR Gypsy 4974 5711 -1501 9 679 6540 3 0 0 chrUextra 12376202 12376940 -16627716 - ROO_I LTR Pao -5932 2324 1587 9 679 4749 18 2 5 chrUextra 12377040 12377600 -16627056 - PROTOP_A DNA P -547 558 1 9 679 883 162 12 35 chrUextra 12377600 12377773 -16626883 - Gypsy12_LTR LTR Gypsy -2138 198 30 9 679 3441 163 14 10 chrUextra 12377891 12378596 -16626060 + SAR_DM Satellite Satellite 369 1076 -396 9 679 555 16 0 0 chrUextra 12378716 12378778 -16625878 - NTS_DM Other Other -178 62 1 9 679 881 25 19 19 chrUextra 12378778 12378956 -16625700 - NTS_DM Other Other 0 240 1 9 679 1503 15 20 20 chrUextra 12378956 12379159 -16625497 - NTS_DM Other Other 0 240 38 9 679 907 9 0 27 chrUextra 12379159 12379271 -16625385 - NTS_DM Other Other -107 133 25 9 679 949 23 0 8 chrUextra 12379323 12379454 -16625202 - NTS_DM Other Other -39 201 72 9 679 3040 190 20 29 chrUextra 12380392 12381127 -16623529 - SAR_DM Satellite Satellite -616 728 1 9 679 1620 3 0 0 chrUextra 12381597 12381902 -16622754 + (TTCTC)n Simple_repeat Simple_repeat 1 305 0 9 679 525 16 0 0 chrUextra 12381906 12381968 -16622688 + (GAGAA)n Simple_repeat Simple_repeat 2 63 0 9 679 6002 29 3 20 chrUextra 12382068 12382806 -16621850 + BATUMI_I LTR Pao 1229 1953 -6010 9 679 6580 1 1 4 chrUextra 12382906 12383644 -16621012 - LSU-rRNA_Dme rRNA rRNA -2279 1621 886 9 679 21 0 0 0 chrUextra 12384176 12384197 -16620459 + AT_rich Low_complexity Low_complexity 1 21 0 9 679 269 125 0 0 chrUextra 12384600 12384640 -16620016 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 679 22 56 0 0 chrUextra 12384653 12384689 -16619967 + AT_rich Low_complexity Low_complexity 1 36 0 9 679 886 18 0 27 chrUextra 12384715 12384827 -16619829 + NTS_DM Other Other 25 133 -107 9 679 1243 25 6 6 chrUextra 12384827 12384991 -16619665 + NTS_DM Other Other 38 201 -39 9 679 907 9 0 27 chrUextra 12385043 12385155 -16619501 + NTS_DM Other Other 25 133 -107 9 679 1304 18 0 6 chrUextra 12385155 12385320 -16619336 + NTS_DM Other Other 38 201 -39 9 679 3459 106 23 21 chrUextra 12386260 12386996 -16617660 + TART_B1 LINE telomeric 735 1411 -9243 9 679 2041 170 8 3 chrUextra 12387102 12387834 -16616822 + SAR_DM Satellite Satellite 1 735 -635 9 679 6899 3 0 0 chrUextra 12387934 12388672 -16615984 - SSU-rRNA_Dme rRNA rRNA -1065 930 193 9 679 3530 175 19 9 chrUextra 12388773 12389507 -16615149 - SAR_DM Satellite Satellite -439 1033 293 9 679 6481 14 1 1 chrUextra 12389610 12390348 -16614308 + FW_DM LINE Jockey 1118 1855 -2837 9 679 3278 179 18 23 chrUextra 12390448 12391184 -16613472 + SAR_DM Satellite Satellite 436 1167 -305 9 679 6408 22 1 1 chrUextra 12391286 12392024 -16612632 - R1_DM LINE R1 -1456 3900 3163 9 679 415 92 92 0 chrUextra 12392124 12392189 -16612467 + Gypsy9_LTR LTR Gypsy 195 265 -71 9 679 3715 90 81 50 chrUextra 12392174 12392829 -16611827 + Gypsy9_I LTR Gypsy 12 686 -3991 9 679 6472 7 30 3 chrUextra 12392962 12393700 -16610956 + STALKER4_I LTR Gypsy 3342 4099 -2431 9 679 6575 11 12 0 chrUextra 12393800 12394538 -16610118 - FW_DM LINE Jockey -205 4487 3741 9 679 947 99 11 20 chrUextra 12394640 12395376 -16609280 + RSP Satellite Satellite 1 729 0 9 679 3708 77 0 2 chrUextra 12395476 12395961 -16608695 - HETA LINE telomeric -3582 2499 2016 9 679 793 181 5 77 chrUextra 12395992 12396214 -16608442 - TAHRE LINE telomeric -10032 431 226 9 679 6525 16 1 0 chrUextra 12396314 12397052 -16607604 - FW_DM LINE Jockey -1577 3115 2377 9 679 6340 19 5 1 chrUextra 12397152 12397890 -16606766 + Gypsy4_I LTR Gypsy 4663 5403 -885 9 679 246 216 0 19 chrUextra 12398046 12398098 -16606558 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 679 268 196 0 19 chrUextra 12398138 12398190 -16606466 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 679 278 176 0 19 chrUextra 12398221 12398273 -16606383 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 679 22 56 0 0 chrUextra 12398286 12398322 -16606334 + AT_rich Low_complexity Low_complexity 1 36 0 9 679 936 9 0 27 chrUextra 12398348 12398460 -16606196 + NTS_DM Other Other 25 133 -107 9 679 1320 18 0 12 chrUextra 12398460 12398626 -16606030 + NTS_DM Other Other 38 201 -39 9 679 376 21 0 60 chrUextra 12398678 12398728 -16605928 + NTS_DM Other Other 25 71 -169 9 679 4775 40 0 5 chrUextra 12398981 12399566 -16605090 + IDEFIX_I LTR Gypsy 1 582 -5046 9 679 2533 21 0 0 chrUextra 12399666 12399952 -16604704 + R1_DM LINE R1 5069 5354 -2 9 679 3165 70 5 5 chrUextra 12399987 12400404 -16604252 + R1_DM LINE R1 1 417 -4939 9 679 3093 175 62 12 chrUextra 12400506 12401229 -16603427 + SAR_DM Satellite Satellite 273 1031 -441 9 679 3294 188 13 20 chrUextra 12401342 12402080 -16602576 - SAR_DM Satellite Satellite -626 733 1 9 679 511 0 0 0 chrUextra 12402180 12402235 -16602421 - NTS_DM Other Other -148 92 38 9 679 936 9 0 27 chrUextra 12402235 12402347 -16602309 - NTS_DM Other Other -107 133 25 9 679 1350 18 0 6 chrUextra 12402399 12402564 -16602092 - NTS_DM Other Other -39 201 38 9 679 906 9 0 35 chrUextra 12402564 12402677 -16601979 - NTS_DM Other Other -107 133 25 9 679 22 56 0 0 chrUextra 12402703 12402739 -16601917 + AT_rich Low_complexity Low_complexity 1 36 0 9 679 248 176 0 38 chrUextra 12402752 12402805 -16601851 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 679 3443 178 12 11 chrUextra 12403025 12403754 -16600902 - SAR_DM Satellite Satellite -514 958 229 9 679 6562 7 1 3 chrUextra 12403856 12404594 -16600062 - R1_DM LINE R1 -1375 3981 3245 9 679 3811 0 5 0 chrUextra 12404694 12405112 -16599544 - DM1731_I LTR Copia -3556 420 1 9 679 2725 41 0 0 chrUextra 12405112 12405432 -16599224 - DM1731_LTR LTR Copia 0 336 17 9 679 6802 0 0 1 chrUextra 12405532 12406270 -16598386 - DMRT1B LINE R1 -1222 3961 3225 9 679 6826 5 0 0 chrUextra 12406370 12407108 -16597548 - DM1731_I LTR Copia -1791 2185 1448 9 679 3589 182 8 8 chrUextra 12407208 12407946 -16596710 - SAR_DM Satellite Satellite -488 984 247 9 679 6723 3 0 0 chrUextra 12408046 12408784 -16595872 + R1_DM LINE R1 2226 2963 -2393 9 679 6799 1 0 0 chrUextra 12408884 12409622 -16595034 - DOC LINE Jockey -1715 3010 2273 9 679 607 29 0 0 chrUextra 12409722 12409792 -16594864 - Gypsy4_I LTR Gypsy -6218 70 1 9 679 2279 42 7 37 chrUextra 12409792 12410088 -16594568 - Gypsy4_LTR LTR Gypsy 0 287 1 9 679 1135 90 18 12 chrUextra 12410195 12410364 -16594292 + HOBO DNA hAT 23 192 -2824 9 679 238 191 21 0 chrUextra 12410413 12410460 -16594196 + HOBO DNA hAT 193 240 -2776 9 679 6730 0 1 0 chrUextra 12410560 12411298 -16593358 + LSU-rRNA_Dme rRNA rRNA 461 1199 -2701 9 679 6438 5 0 0 chrUextra 12411401 12412136 -16592520 - R1_DM LINE R1 -4232 1124 390 9 679 504 196 0 61 chrUextra 12413912 12414026 -16590630 - HETRP_DM Satellite Satellite -248 1624 1518 9 679 729 184 13 26 chrUextra 12414156 12414312 -16590344 - HETRP_DM Satellite Satellite -190 1682 1529 9 679 733 211 56 66 chrUextra 12414434 12414647 -16590009 - HETRP_DM Satellite Satellite -188 1684 1474 9 679 6802 1 0 0 chrUextra 12414750 12415488 -16589168 - DOC LINE Jockey -72 4653 3916 9 679 3502 37 43 2 chrUextra 12415590 12416028 -16588628 + PROTOP DNA P 101 556 -3924 9 679 2107 58 4 0 chrUextra 12416025 12416285 -16588371 + PROTOP DNA P 4220 4480 0 9 679 4961 78 56 31 chrUextra 12417264 12418002 -16586654 + TART LINE telomeric 6901 7656 -6821 9 679 2917 253 3 3 chrUextra 12418111 12418825 -16585831 - ROVER-I_DM LTR Gypsy -3094 3490 2777 9 679 5493 39 106 22 chrUextra 12418940 12419674 -16584982 + BATUMI_I LTR Pao 1278 2073 -5890 9 679 6583 12 0 7 chrUextra 12419778 12420516 -16584140 - Gypsy4_I LTR Gypsy -4104 2184 1452 9 679 2348 133 22 31 chrUextra 12420616 12421352 -16583304 - DMSAT6 Satellite Satellite -134 728 1 9 679 2169 210 103 44 chrUextra 12422331 12423030 -16581626 + Gypsy12_LTR LTR Gypsy 831 1570 -766 9 679 1700 171 15 9 chrUextra 12423130 12423467 -16581189 - SAR_DM Satellite Satellite -662 810 472 9 679 1886 172 13 11 chrUextra 12423487 12423868 -16580788 - SAR_DM Satellite Satellite -614 858 477 9 679 6744 0 1 0 chrUextra 12423968 12424706 -16579950 - ROO_I LTR Pao -1656 6600 5862 9 679 6320 29 41 0 chrUextra 12424806 12425544 -16579112 + R1_DM LINE R1 4104 4871 -485 9 679 2867 9 0 0 chrUextra 12425644 12425959 -16578697 - R1_DM LINE R1 -3 5353 5039 9 679 3946 0 0 0 chrUextra 12425961 12426382 -16578274 - LSU-rRNA_Dme rRNA rRNA -1251 2649 2229 9 679 6419 23 0 0 chrUextra 12426482 12427220 -16577436 - R1_DM LINE R1 -2491 2865 2128 9 679 6052 39 3 18 chrUextra 12427320 12428058 -16576598 - CIRCE LINE Composite -3098 3258 2532 9 679 5253 35 6 3 chrUextra 12428158 12428785 -16575871 + DMRT1B LINE R1 4555 5183 0 9 679 426 11 99 0 chrUextra 12428803 12428894 -16575762 + (CAGAC)n Simple_repeat Simple_repeat 1 100 0 9 679 6126 32 12 0 chrUextra 12428996 12429734 -16574922 + MDG1_I LTR Gypsy 4835 5581 -1015 9 679 778 192 29 0 chrUextra 12429840 12430012 -16574644 - SAR_DM Satellite Satellite -749 723 547 9 679 235 235 180 32 chrUextra 12429884 12430073 -16574583 + XDMR_DM Unknown Unknown 6 222 -138 9 679 2717 172 7 7 chrUextra 12430032 12430572 -16574084 - SAR_DM Satellite Satellite -396 1076 537 9 679 361 0 24 0 chrUextra 12430672 12430714 -16573942 - LSU-rRNA_Dme rRNA rRNA -2070 1830 1788 9 679 5814 3 6 5 chrUextra 12430755 12431410 -16573246 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1136 9 679 2661 92 20 9 chrUextra 12431510 12432248 -16572408 - DMSAT6 Satellite Satellite -95 746 1 9 679 3520 171 10 22 chrUextra 12432350 12433081 -16571575 - SAR_DM Satellite Satellite -382 1090 369 9 679 1455 18 6 0 chrUextra 12433186 12433357 -16571299 - FW_DM LINE Jockey -1921 2771 2600 9 679 3892 22 2 0 chrUextra 12433356 12433801 -16570855 - FW_DM LINE Jockey -2499 2193 1748 9 679 1054 9 0 0 chrUextra 12433808 12433924 -16570732 + ROO_I LTR Pao 4193 4308 -3948 9 679 3667 144 10 13 chrUextra 12434024 12434762 -16569894 + BATUMI_I LTR Pao 4236 4969 -2945 9 679 6043 6 0 65 chrUextra 12434862 12435600 -16569056 - Gypsy2_I LTR Gypsy -1855 4280 3591 9 679 3559 33 70 19 chrUextra 12435700 12436311 -16568345 + PROTOP DNA P 207 753 -3727 9 679 745 41 20 0 chrUextra 12436340 12436438 -16568218 + PROTOP_A DNA P 700 799 -306 9 679 21 89 0 0 chrUextra 12437065 12437121 -16567535 + AT_rich Low_complexity Low_complexity 1 56 0 9 679 1266 0 0 0 chrUextra 12437140 12437276 -16567380 - SSU-rRNA_Dme rRNA rRNA 0 1995 1860 9 679 846 0 0 0 chrUextra 12438020 12438114 -16566542 + (TTGTG)n Simple_repeat Simple_repeat 1 94 0 9 679 3939 0 0 0 chrUextra 12439052 12439479 -16565177 - ROO_I LTR Pao -7829 427 1 9 679 2905 3 0 0 chrUextra 12439479 12439790 -16564866 - ROO_LTR LTR Pao 0 428 118 9 679 756 0 0 0 chrUextra 12439890 12439971 -16564685 + LSU-rRNA_Dme rRNA rRNA 3820 3900 0 9 679 268 196 0 19 chrUextra 12440072 12440124 -16564532 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 679 268 196 0 19 chrUextra 12440164 12440216 -16564440 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 679 278 176 0 19 chrUextra 12440247 12440299 -16564357 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 679 22 56 0 0 chrUextra 12440312 12440348 -16564308 + AT_rich Low_complexity Low_complexity 1 36 0 9 679 936 9 0 27 chrUextra 12440374 12440486 -16564170 + NTS_DM Other Other 25 133 -107 9 679 1124 21 7 7 chrUextra 12440486 12440628 -16564028 + NTS_DM Other Other 38 179 -61 9 679 6630 7 0 0 chrUextra 12440728 12441466 -16563190 + DMRT1B LINE R1 1171 1908 -3275 9 679 280 250 0 0 chrUextra 12442405 12442473 -16562183 + (AATAG)n Simple_repeat Simple_repeat 2 69 0 9 679 540 222 0 0 chrUextra 12442474 12442708 -16561948 + (CATAG)n Simple_repeat Simple_repeat 1 234 0 9 679 520 101 10 0 chrUextra 12442734 12442833 -16561823 - G2_DM LINE Jockey -3 3099 3000 9 679 2495 39 13 6 chrUextra 12442829 12443142 -16561514 - G2_DM LINE Jockey -211 2891 2577 9 679 4918 42 0 0 chrUextra 12443242 12443821 -16560835 + R1_DM LINE R1 1250 1828 -3528 9 679 1301 38 0 0 chrUextra 12443819 12443979 -16560677 + R1_DM LINE R1 1317 1476 -3880 9 679 6001 19 18 0 chrUextra 12444083 12444818 -16559838 - LSU-rRNA_Dme rRNA rRNA -221 3679 2932 9 679 2725 6 0 12 chrUextra 12444918 12445243 -16559413 - SSU-rRNA_Dme rRNA rRNA -1674 321 1 9 679 32 0 0 0 chrUextra 12445375 12445407 -16559249 + AT_rich Low_complexity Low_complexity 1 32 0 9 679 5991 4 37 3 chrUextra 12445756 12446494 -16558162 + STALKER4_I LTR Gypsy 5081 5843 -687 9 679 5971 12 0 0 chrUextra 12446594 12447332 -16557324 + QUASIMODO_I LTR Gypsy 986 1723 -4337 9 679 2432 171 14 10 chrUextra 12447436 12447471 -16557185 - SAR_DM Satellite Satellite -435 733 690 9 679 1065 76 0 0 chrUextra 12447471 12447629 -16557027 + ARS406_DM Unknown Unknown 1 158 -195 9 679 2432 171 14 10 chrUextra 12447629 12448166 -16556490 - SAR_DM Satellite Satellite -435 689 1 9 679 2861 176 44 10 chrUextra 12448277 12448998 -16555658 + SAR_DM Satellite Satellite 192 937 -535 9 679 1875 177 194 42 chrUextra 12449107 12449840 -16554816 + HETA LINE telomeric 5100 5890 -191 9 679 1499 88 20 4 chrUextra 12449944 12450196 -16554460 - MDG1_I LTR Gypsy -5213 1383 1128 9 679 2566 76 10 10 chrUextra 12450268 12450681 -16553975 - MDG1_I LTR Gypsy -5462 1134 722 9 679 1243 25 6 12 chrUextra 12450781 12450944 -16553712 - DIVER_I LTR Pao -5481 162 1 9 679 1182 107 0 100 chrUextra 12450965 12451214 -16553442 - DIVER_LTR LTR Pao 0 224 1 9 679 1489 88 0 55 chrUextra 12451215 12451468 -16553188 - CIRCE LINE Composite -1869 4487 4249 9 679 393 0 0 0 chrUextra 12451469 12451518 -16553138 + DMSAT6 Satellite Satellite 326 374 -96 9 84 3151 176 14 14 chrUextra 12451619 12452355 -16552301 - SAR_DM Satellite Satellite -449 1023 288 9 680 2150 184 11 7 chrUextra 12452455 12453192 -16551464 + SAR_DM Satellite Satellite 1 740 -677 9 680 27 29 0 0 chrUextra 12453456 12453490 -16551166 + AT_rich Low_complexity Low_complexity 1 34 0 9 680 2910 189 12 11 chrUextra 12454139 12454866 -16549790 - SAR_DM Satellite Satellite -515 957 230 9 680 1850 4 4 75 chrUextra 12454966 12455218 -16549438 + Gypsy12_LTR LTR Gypsy 2103 2336 0 9 680 3468 34 27 23 chrUextra 12455218 12455703 -16548953 + Gypsy12_I LTR Gypsy 1 487 -5059 9 680 3219 169 10 10 chrUextra 12455806 12456528 -16548128 - SAR_DM Satellite Satellite -425 1047 326 9 680 6450 1 0 0 chrUextra 12456640 12457377 -16547279 + Gypsy6_I LTR Gypsy 977 1713 -5299 9 680 5095 18 15 0 chrUextra 12457477 12458089 -16546567 + CIRCE LINE Composite 5736 6356 0 9 680 999 32 0 0 chrUextra 12458089 12458214 -16546442 + CIRCE LINE Composite 1 125 -6231 9 680 2864 183 16 22 chrUextra 12458318 12459050 -16545606 - SAR_DM Satellite Satellite -313 1159 432 9 680 1620 5 0 0 chrUextra 12459151 12459365 -16545291 + (TCTTG)n Simple_repeat Simple_repeat 1 214 0 9 680 2925 137 0 2 chrUextra 12460248 12460725 -16543931 - HMSBEAGLE_I LTR Gypsy -711 5818 5343 9 680 201 121 0 0 chrUextra 12461355 12461388 -16543268 + (TC)n Simple_repeat Simple_repeat 1 33 0 9 680 2741 186 27 11 chrUextra 12462499 12463236 -16541420 + SAR_DM Satellite Satellite 1 748 -282 9 680 5711 47 0 6 chrUextra 12463349 12464073 -16540583 + BATUMI_I LTR Pao 5224 5943 -2020 9 680 2953 179 11 23 chrUextra 12464173 12464900 -16539756 + SAR_DM Satellite Satellite 402 1119 -353 9 680 339 191 0 21 chrUextra 12464814 12464910 -16539746 - XDMR_DM Unknown Unknown 0 360 267 9 680 6172 7 0 3 chrUextra 12465010 12465747 -16538909 + STALKER4_I LTR Gypsy 4212 4946 -1584 9 680 24 53 0 0 chrUextra 12466545 12466583 -16538073 + AT_rich Low_complexity Low_complexity 1 38 0 9 680 2291 0 4 0 chrUextra 12466684 12466947 -16537709 + SSU-rRNA_Dme rRNA rRNA 1732 1995 0 9 680 21 89 0 0 chrUextra 12466966 12467022 -16537634 + AT_rich Low_complexity Low_complexity 1 56 0 9 680 4771 11 4 0 chrUextra 12467521 12468084 -16536572 - R1_DM LINE R1 -4791 565 1 9 680 1494 0 0 6 chrUextra 12468084 12468258 -16536398 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2460 9 680 6415 0 0 0 chrUextra 12468358 12469095 -16535561 + STALKER4_I LTR Gypsy 3657 4393 -2137 9 680 920 71 4 19 chrUextra 12469203 12469932 -16534724 - RSP Satellite Satellite -45 718 1 9 680 6248 3 1 0 chrUextra 12470032 12470769 -16533887 + IDEFIX_I LTR Gypsy 1885 2622 -3006 9 680 2473 116 59 14 chrUextra 12470869 12471576 -16533080 + DMRT1B LINE R1 4445 5183 0 9 680 6166 0 0 0 chrUextra 12471709 12472443 -16532213 + ROO_I LTR Pao 21 754 -7502 9 680 6367 1 0 0 chrUextra 12472543 12473280 -16531376 + DOC LINE Jockey 2924 3660 -1065 9 680 353 23 0 0 chrUextra 12473380 12473423 -16531233 - NTS_DM Other Other -160 80 38 9 680 870 9 0 27 chrUextra 12473423 12473535 -16531121 - NTS_DM Other Other -107 133 25 9 680 22 56 0 0 chrUextra 12473561 12473597 -16531059 + AT_rich Low_complexity Low_complexity 1 36 0 9 680 255 125 0 0 chrUextra 12473610 12473650 -16531006 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 680 246 150 0 0 chrUextra 12473693 12473733 -16530923 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 680 246 150 0 0 chrUextra 12473785 12473825 -16530831 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 680 246 150 0 0 chrUextra 12473877 12473917 -16530739 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 680 22 56 0 0 chrUextra 12473922 12473958 -16530698 + AT_rich Low_complexity Low_complexity 1 36 0 9 680 680 23 12 0 chrUextra 12474031 12474117 -16530539 - LSU-rRNA_Dme rRNA rRNA 0 3900 3814 9 680 1252 18 0 6 chrUextra 12474263 12474428 -16530228 - NTS_DM Other Other -39 201 38 9 680 848 18 0 27 chrUextra 12474428 12474540 -16530116 - NTS_DM Other Other -107 133 25 9 680 1252 18 0 6 chrUextra 12474592 12474757 -16529899 - NTS_DM Other Other -39 201 38 9 680 870 9 0 27 chrUextra 12474757 12474869 -16529787 - NTS_DM Other Other -107 133 25 9 680 22 56 0 0 chrUextra 12474895 12474931 -16529725 + AT_rich Low_complexity Low_complexity 1 36 0 9 680 6170 4 3 3 chrUextra 12475054 12475791 -16528865 - LSU-rRNA_Dme rRNA rRNA -2582 1318 582 9 680 1490 0 0 16 chrUextra 12475891 12476085 -16528571 + DOC6_DM LINE Jockey 4032 4222 0 9 680 263 287 23 54 chrUextra 12476098 12476359 -16528297 + QUASIMODO_I LTR Gypsy 5678 5930 -130 9 680 21 0 0 0 chrUextra 12476367 12476388 -16528268 + AT_rich Low_complexity Low_complexity 1 21 0 9 680 6355 4 0 0 chrUextra 12476728 12477465 -16527191 - MDG1_I LTR Gypsy -2008 4588 3852 9 680 6293 1 1 4 chrUextra 12477565 12478302 -16526354 + SSU-rRNA_Dme rRNA rRNA 878 1612 -383 9 680 3378 0 2 0 chrUextra 12478404 12478806 -16525850 + HMSBEAGLE_I LTR Gypsy 6127 6529 0 9 680 2316 8 0 0 chrUextra 12478806 12479072 -16525584 + DMLTR5 LTR Gypsy 1 266 0 9 680 435 119 0 0 chrUextra 12479072 12479139 -16525517 + (TA)n Simple_repeat Simple_repeat 2 68 0 9 680 2711 151 31 55 chrUextra 12480079 12480812 -16523844 - SAR_DM Satellite Satellite -659 715 1 9 680 5945 19 15 1 chrUextra 12480913 12481650 -16523006 - NINJA_I LTR Pao -63 5948 5202 9 680 2147 139 7 12 chrUextra 12481750 12482178 -16522478 - STALKER4_I LTR Gypsy -6721 681 235 9 680 289 96 0 37 chrUextra 12482352 12482406 -16522250 - STALKER4_I LTR Gypsy -7350 52 1 9 680 330 25 0 0 chrUextra 12482406 12482433 -16522223 - STALKER4_I LTR Gypsy -6503 27 1 9 680 432 0 0 19 chrUextra 12482433 12482487 -16522169 - STALKER4_LTR LTR Gypsy 0 402 350 9 680 6049 26 1 0 chrUextra 12482587 12483324 -16521332 + R1_DM LINE R1 1788 2525 -2831 9 680 572 122 19 0 chrUextra 12483424 12483531 -16521125 - ARS406_DM Unknown Unknown -244 109 1 9 680 2864 182 16 10 chrUextra 12483441 12484129 -16520527 + SAR_DM Satellite Satellite 198 889 -583 9 680 699 67 19 0 chrUextra 12484055 12484160 -16520496 - ARS406_DM Unknown Unknown -164 189 83 9 680 6474 0 0 1 chrUextra 12484261 12484998 -16519658 - BEL_I LTR Pao -295 5109 4374 9 680 1763 10 0 0 chrUextra 12485098 12485303 -16519353 + R1_DM LINE R1 5152 5356 0 9 680 4626 2 0 2 chrUextra 12485301 12485835 -16518821 + LSU-rRNA_Dme rRNA rRNA 2640 3172 -728 9 680 6452 1 1 0 chrUextra 12485935 12486672 -16517984 + SSU-rRNA_Dme rRNA rRNA 146 883 -1112 9 680 6115 20 0 0 chrUextra 12486772 12487509 -16517147 + R1_DM LINE R1 2050 2786 -2570 9 680 451 188 33 33 chrUextra 12487718 12487839 -16516817 + HOBO DNA hAT 2845 2965 -51 9 680 710 63 0 0 chrUextra 12487863 12487958 -16516698 + DNAREP1_DM LINE Penelope 500 594 0 9 680 482 80 11 43 chrUextra 12487976 12488068 -16516588 - TRANSIB3 DNA Transib -2791 92 4 9 680 2056 51 11 0 chrUextra 12488071 12488346 -16516310 + DOC3_DM LINE Jockey 2578 2855 -1885 9 680 1861 0 17 13 chrUextra 12488470 12488709 -16515947 + NTS_DM Other Other 1 240 0 9 680 1847 4 17 13 chrUextra 12488709 12488948 -16515708 + NTS_DM Other Other 1 240 0 9 680 1277 19 0 6 chrUextra 12488948 12489111 -16515545 + NTS_DM Other Other 1 162 -78 9 680 5963 9 15 1 chrUextra 12489283 12490018 -16514638 + G_DM LINE Jockey 171 915 -3431 9 680 2610 31 0 0 chrUextra 12490120 12490442 -16514214 + DM1731_LTR LTR Copia 14 335 -1 9 680 1587 15 0 0 chrUextra 12490442 12490787 -16513869 + (TTATA)n Simple_repeat Simple_repeat 1 345 0 9 680 591 14 0 0 chrUextra 12490787 12490857 -16513799 + DM1731_LTR LTR Copia 5 74 -262 9 680 871 0 0 0 chrUextra 12490957 12491060 -16513596 - MAX_LTR LTR Pao -218 103 1 9 680 1930 26 0 0 chrUextra 12491060 12491292 -16513364 + PROTOP DNA P 4249 4480 0 9 680 24 0 0 0 chrUextra 12491669 12491693 -16512963 + AT_rich Low_complexity Low_complexity 1 24 0 9 680 2161 42 63 0 chrUextra 12491794 12492080 -16512576 - PROTOP DNA P -4176 304 1 9 680 6350 5 1 0 chrUextra 12492631 12493368 -16511288 - MICROPIA_I LTR Gypsy -3064 1412 675 9 680 471 147 10 10 chrUextra 12493468 12493564 -16511092 + ARS406_DM Unknown Unknown 94 189 -164 9 680 2923 162 31 21 chrUextra 12493483 12494181 -16510475 - SAR_DM Satellite Satellite -577 895 191 9 680 582 182 0 0 chrUextra 12494084 12494205 -16510451 + ARS406_DM Unknown Unknown 1 121 -232 9 680 3265 169 10 8 chrUextra 12494325 12495041 -16509615 + SAR_DM Satellite Satellite 326 1042 -430 9 680 4017 2 2 6 chrUextra 12495142 12495627 -16509029 + BATUMI_I LTR Pao 7481 7963 0 9 680 1903 20 0 31 chrUextra 12495627 12495879 -16508777 + BATUMI_I LTR Pao 7002 7245 -718 9 680 39 50 0 0 chrUextra 12496004 12496064 -16508592 + AT_rich Low_complexity Low_complexity 1 60 0 9 680 428 190 0 69 chrUextra 12496586 12496716 -16507940 - Gypsy8_I LTR Gypsy -4123 224 104 9 680 6345 4 0 0 chrUextra 12496816 12497553 -16507103 + FW_DM LINE Jockey 3137 3873 -819 9 680 2442 39 0 0 chrUextra 12498081 12498390 -16506266 + DIVER2_I LTR Pao 1223 1531 -2616 9 680 2733 9 0 0 chrUextra 12499327 12499647 -16505009 + PROTOP_A DNA P 786 1105 0 9 680 2430 67 58 0 chrUextra 12499654 12499996 -16504660 + TART LINE telomeric 1287 1648 -12829 9 680 343 47 328 0 chrUextra 12500000 12500064 -16504592 + TART LINE telomeric 1653 1737 -12740 9 680 234 0 0 0 chrUextra 12500874 12500900 -16503756 + (TC)n Simple_repeat Simple_repeat 1 26 0 9 680 2938 165 11 16 chrUextra 12501001 12501738 -16502918 - BATUMI_I LTR Pao -3014 4900 4205 9 680 817 0 0 0 chrUextra 12501857 12501953 -16502703 - NTS_DM Other Other -107 133 38 9 680 802 9 9 36 chrUextra 12501953 12502065 -16502591 - NTS_DM Other Other -107 133 25 9 680 21 57 0 0 chrUextra 12502091 12502126 -16502530 + AT_rich Low_complexity Low_complexity 1 35 0 9 680 1252 18 0 6 chrUextra 12502126 12502291 -16502365 - NTS_DM Other Other -39 201 38 9 680 870 9 0 27 chrUextra 12502291 12502403 -16502253 - NTS_DM Other Other -107 133 25 9 680 811 25 0 8 chrUextra 12502455 12502575 -16502081 - NTS_DM Other Other -39 201 83 9 680 4892 19 0 0 chrUextra 12502675 12503268 -16501388 - STALKER4_I LTR Gypsy -1528 5002 4410 9 680 1190 14 35 0 chrUextra 12503267 12503412 -16501244 - STALKER4_I LTR Gypsy -2235 4295 4146 9 680 6001 18 27 1 chrUextra 12504349 12505085 -16499571 + Copia2_I LTR Copia 3408 4162 0 9 680 2163 45 3 37 chrUextra 12505412 12505709 -16498947 + Gypsy4_LTR LTR Gypsy 1 287 0 9 680 408 209 0 0 chrUextra 12505837 12505923 -16498733 + Gypsy_I LTR Gypsy 6094 6179 -328 9 680 5776 24 45 1 chrUextra 12506023 12506760 -16497896 - R1_DM LINE R1 -1096 4260 3492 9 680 2893 3 0 0 chrUextra 12506860 12507192 -16497464 - SSU-rRNA_Dme rRNA rRNA -1663 332 1 9 680 32 0 0 0 chrUextra 12507324 12507356 -16497300 + AT_rich Low_complexity Low_complexity 1 32 0 9 680 6261 0 0 1 chrUextra 12507697 12508434 -16496222 + ROO_I LTR Pao 3706 4441 -3815 9 680 1500 54 5 0 chrUextra 12508534 12508737 -16495919 - R1_DM LINE R1 -4744 612 409 9 680 4248 30 2 4 chrUextra 12508738 12509270 -16495386 + R1_DM LINE R1 4753 5283 -73 9 680 6049 3 0 0 chrUextra 12509371 12510108 -16494548 + DM176_I LTR Gypsy 986 1722 -4698 9 680 5699 26 67 5 chrUextra 12510208 12510945 -16493711 + FW_DM LINE Jockey 3604 4385 -307 9 680 2963 177 9 8 chrUextra 12511045 12511782 -16492874 - SAR_DM Satellite Satellite -270 1202 195 9 680 6320 3 0 0 chrUextra 12511882 12512619 -16492037 + TABOR_I LTR Gypsy 4064 4800 -1536 9 680 5282 52 29 14 chrUextra 12513556 12514293 -16490363 - R1_DM LINE R1 -4289 1067 320 9 680 3198 157 12 13 chrUextra 12514393 12515129 -16489527 - BATUMI_I LTR Pao -2945 4969 4236 9 680 3182 0 0 0 chrUextra 12515230 12515593 -16489063 + LSU-rRNA_Dme rRNA rRNA 2270 2632 -1268 9 680 3193 5 5 0 chrUextra 12515593 12515967 -16488689 + R1_DM LINE R1 1 376 -4980 9 680 6245 1 0 1 chrUextra 12516067 12516804 -16487852 + ROO_I LTR Pao 2534 3269 -4987 9 680 2791 191 15 22 chrUextra 12516908 12517641 -16487015 - SAR_DM Satellite Satellite -300 1172 445 9 680 2436 77 21 30 chrUextra 12517741 12518477 -16486179 - DMSAT6 Satellite Satellite -53 728 1 9 680 3767 0 7 4 chrUextra 12518578 12519029 -16485627 + LSU-rRNA_Dme rRNA rRNA 1337 1788 -2112 9 680 2103 4 0 0 chrUextra 12519073 12519315 -16485341 + LSU-rRNA_Dme rRNA rRNA 1788 2029 -1871 9 680 5747 16 0 0 chrUextra 12520252 12520932 -16483724 - ROO_I LTR Pao -532 7724 7045 9 680 450 17 0 0 chrUextra 12520930 12520989 -16483667 - ROO_I LTR Pao -1382 6874 6816 9 680 503 88 175 10 chrUextra 12521089 12521192 -16483464 + DNAREP1_DM LINE Penelope 150 269 -325 9 680 947 45 30 8 chrUextra 12521174 12521308 -16483348 + Copia2_I LTR Copia 902 1038 -3124 9 680 3944 32 20 0 chrUextra 12521325 12521826 -16482830 + Copia2_I LTR Copia 1347 1857 -2305 9 680 3238 171 7 15 chrUextra 12521926 12522645 -16482011 + SAR_DM Satellite Satellite 371 1083 -389 9 680 225 78 0 105 chrUextra 12522606 12522663 -16481993 - XDMR_DM Unknown Unknown -9 351 301 9 680 2901 70 80 5 chrUextra 12522781 12523383 -16481273 + Gypsy12_I LTR Gypsy 4895 5541 -5 9 680 377 184 11 65 chrUextra 12523400 12523493 -16481163 + Gypsy12_LTR LTR Gypsy 13 100 -2236 9 680 2359 109 27 25 chrUextra 12523631 12524337 -16480319 - DMSAT6 Satellite Satellite 0 706 1 9 680 618 107 10 0 chrUextra 12524437 12524540 -16480116 - ARS406_DM Unknown Unknown -249 104 1 9 680 3025 189 8 10 chrUextra 12524448 12525174 -16479482 + SAR_DM Satellite Satellite 195 919 -553 9 680 2996 176 18 22 chrUextra 12525274 12526011 -16478645 + SAR_DM Satellite Satellite 419 1152 -320 9 680 963 16 117 0 chrUextra 12526111 12526239 -16478417 - PROTOP_A DNA P -962 143 1 9 680 6250 19 0 0 chrUextra 12526948 12527685 -16476971 + MAX_I LTR Pao 6200 6936 -978 9 680 4573 11 5 12 chrUextra 12527785 12528357 -16476299 + FW_DM LINE Jockey 4124 4691 -1 9 680 1132 90 39 0 chrUextra 12528344 12528522 -16476134 + MDG1_I LTR Gypsy 5454 5638 -958 9 680 6182 5 0 4 chrUextra 12528622 12529359 -16475297 + ROO_I LTR Pao 2293 3026 -5230 9 680 24 32 0 0 chrUextra 12529520 12529551 -16475105 + AT_rich Low_complexity Low_complexity 1 31 0 9 680 1494 28 0 0 chrUextra 12530296 12530475 -16474181 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 9 680 183 42 0 0 chrUextra 12530487 12530511 -16474145 + (TTATA)n Simple_repeat Simple_repeat 1 24 0 9 680 3747 7 2 0 chrUextra 12530539 12530990 -16473666 + MAX_I LTR Pao 7463 7914 0 9 680 363 0 0 0 chrUextra 12530990 12531033 -16473623 + MAX_LTR LTR Pao 1 43 -278 9 680 2415 174 20 23 chrUextra 12531134 12531735 -16472921 - SAR_DM Satellite Satellite -683 789 191 9 680 458 212 0 0 chrUextra 12531751 12531864 -16472792 - SAR_DM Satellite Satellite -396 1076 964 9 680 6214 5 1 1 chrUextra 12531970 12532707 -16471949 - R1_DM LINE R1 -3666 1690 954 9 680 26 74 0 0 chrUextra 12533135 12533189 -16471467 + AT_rich Low_complexity Low_complexity 1 54 0 9 680 359 236 70 85 chrUextra 12533222 12533421 -16471235 - HMSBEAGLE_I LTR Gypsy -6110 419 224 9 680 3069 195 15 20 chrUextra 12534482 12535218 -16469438 + SAR_DM Satellite Satellite 1 731 -208 9 680 2166 19 0 4 chrUextra 12535318 12535580 -16469076 - PROTOP_A DNA P -844 261 1 9 680 3887 6 0 0 chrUextra 12535580 12536055 -16468601 + QUASIMODO_I LTR Gypsy 4627 5101 -959 9 680 6347 5 0 0 chrUextra 12536155 12536892 -16467764 + Invader1_I LTR Gypsy 2313 3049 -137 9 680 1698 41 0 9 chrUextra 12536992 12537212 -16467444 - BEL_LTR LTR Pao -136 225 8 9 680 4508 13 0 0 chrUextra 12537203 12537729 -16466927 - BEL_I LTR Pao -16 5388 4863 9 680 6290 1 1 0 chrUextra 12537829 12538566 -16466090 + ROO_I LTR Pao 1195 1932 -6324 9 680 926 108 0 6 chrUextra 12538666 12538825 -16465831 + ARS406_DM Unknown Unknown 1 158 -195 9 680 2742 166 5 5 chrUextra 12538832 12539403 -16465253 - SAR_DM Satellite Satellite -569 903 333 9 680 1323 119 18 0 chrUextra 12540010 12540237 -16464419 - FW_DM LINE Jockey -8 4684 4454 9 680 6318 5 0 5 chrUextra 12540340 12541077 -16463579 + MICROPIA_I LTR Gypsy 2920 3652 -824 9 680 6187 15 0 4 chrUextra 12541177 12541914 -16462742 + Gypsy4_I LTR Gypsy 658 1391 -4897 9 680 6116 16 1 0 chrUextra 12542014 12542751 -16461905 + PROTOP DNA P 2102 2839 -1641 9 680 5131 88 18 1 chrUextra 12542851 12543588 -16461068 - R1_DM LINE R1 -3666 1690 942 9 680 3670 34 2 14 chrUextra 12543688 12544170 -16460486 + BATUMI_I LTR Pao 1599 2074 -5889 9 680 173 20 0 0 chrUextra 12544170 12544371 -16460285 + AT_rich Low_complexity Low_complexity 1 201 0 9 680 403 19 0 0 chrUextra 12544371 12544425 -16460231 + BATUMI_I LTR Pao 7050 7103 -860 9 680 23 68 0 0 chrUextra 12545101 12545145 -16459511 + AT_rich Low_complexity Low_complexity 1 44 0 9 680 26 30 0 0 chrUextra 12545191 12545224 -16459432 + AT_rich Low_complexity Low_complexity 1 33 0 9 680 6244 1 3 3 chrUextra 12545362 12546099 -16458557 + R1_DM LINE R1 1121 1857 -3499 9 680 34 24 0 0 chrUextra 12546395 12546436 -16458220 + AT_rich Low_complexity Low_complexity 1 41 0 9 680 996 206 198 45 chrUextra 12546446 12546936 -16457720 - HETA LINE telomeric -171 5910 5346 9 680 1233 0 0 0 chrUextra 12547036 12547173 -16457483 + (CACAA)n Simple_repeat Simple_repeat 3 139 0 9 680 3017 198 14 7 chrUextra 12547877 12548610 -16456046 + SAR_DM Satellite Satellite 1 738 -396 9 680 2063 182 14 4 chrUextra 12548711 12549439 -16455217 + SAR_DM Satellite Satellite 1 734 -677 9 680 264 75 25 0 chrUextra 12549407 12549447 -16455209 - ARS406_DM Unknown Unknown -164 189 149 9 680 1783 81 8 8 chrUextra 12549547 12549997 -16454659 - CIRCE LINE Composite -3654 2702 2203 9 680 1973 43 50 0 chrUextra 12550026 12550284 -16454372 - CIRCE LINE Composite -4474 1882 1612 9 680 6288 4 0 0 chrUextra 12550384 12551121 -16453535 - R1_DM LINE R1 -1908 3448 2712 9 680 786 9 0 84 chrUextra 12551221 12551340 -16453316 - DM176_LTR LTR Gypsy -398 109 1 9 680 4927 3 0 0 chrUextra 12551340 12551958 -16452698 - DM176_I LTR Gypsy 0 6420 5803 9 680 6278 1 3 1 chrUextra 12552058 12552795 -16451861 - LSU-rRNA_Dme rRNA rRNA -2553 1347 610 9 680 34 24 0 0 chrUextra 12553032 12553073 -16451583 + AT_rich Low_complexity Low_complexity 1 41 0 9 680 4891 2 0 0 chrUextra 12553899 12554469 -16450187 + FW_DM LINE Jockey 890 1459 -3233 9 680 3422 14 0 0 chrUextra 12555406 12555826 -16448830 + FW_DM LINE Jockey 1344 1763 -2929 9 680 1990 26 4 53 chrUextra 12555826 12556107 -16448549 - MDG3_LTR LTR Gypsy 0 267 1 9 680 306 0 0 0 chrUextra 12556107 12556143 -16448513 - MDG3_I LTR Gypsy 0 4986 4951 9 680 391 267 1 4 chrUextra 12556295 12556474 -16448182 + Gypsy11_I LTR Gypsy 3233 3387 -137 9 680 22 35 0 0 chrUextra 12556607 12556636 -16448020 + AT_rich Low_complexity Low_complexity 1 29 0 9 680 223 200 42 10 chrUextra 12556683 12556819 -16447837 + A-rich Low_complexity Low_complexity 1 140 0 9 680 337 27 12 37 chrUextra 12556827 12556897 -16447759 + STALKER4_I LTR Gypsy 6491 6530 0 9 680 574 37 0 0 chrUextra 12556898 12556980 -16447676 + Stalker3_LTR LTR Gypsy 2 83 -289 9 680 498 26 0 0 chrUextra 12557080 12557158 -16447498 + FW_DM LINE Jockey 4615 4692 0 9 680 4950 23 45 17 chrUextra 12557154 12557817 -16446839 - ROO_I LTR Pao -4051 4205 3524 9 680 2303 274 0 0 chrUextra 12557919 12558632 -16446024 + ROVER-I_DM LTR Gypsy 3401 4113 -2471 9 680 5633 46 5 3 chrUextra 12558754 12559491 -16445165 - R1_DM LINE R1 -3712 1644 906 9 680 2662 29 6 11 chrUextra 12559977 12560327 -16444329 + CIRCE LINE Composite 4981 5328 -1028 9 680 6340 3 0 1 chrUextra 12560427 12561163 -16443493 - DMRT1A LINE R1 -2744 2439 1705 9 680 4183 26 58 0 chrUextra 12561263 12561999 -16442657 + DMRT1B LINE R1 2359 3137 -2046 9 680 2064 122 6 22 chrUextra 12562099 12562461 -16442195 - Gypsy12_I LTR Gypsy -4968 578 223 9 680 881 159 101 35 chrUextra 12562597 12562825 -16441831 - Gypsy12_LTR LTR Gypsy -827 1509 1267 9 680 3809 2 0 2 chrUextra 12562935 12563379 -16441277 - LSU-rRNA_Dme rRNA rRNA -818 3082 2640 9 680 2502 0 0 3 chrUextra 12563381 12563671 -16440985 - R1_DM LINE R1 0 5356 5068 9 680 2180 140 60 23 chrUextra 12563794 12564427 -16440229 + Stalker2_I LTR Gypsy 291 999 -5531 9 680 3682 53 16 42 chrUextra 12564607 12565182 -16439474 - ROO_I LTR Pao -7583 673 114 9 680 1011 39 0 0 chrUextra 12565215 12565343 -16439313 - ROO_LTR LTR Pao 0 428 301 9 680 6007 25 0 0 chrUextra 12565443 12566162 -16438494 - R1_DM LINE R1 -612 4744 4026 9 680 4501 86 20 8 chrUextra 12566280 12567015 -16437641 + R1_DM LINE R1 3456 4009 -1347 9 680 3974 16 53 0 chrUextra 12567115 12567849 -16436807 - FW_DM LINE Jockey -557 4135 3363 9 680 5822 23 67 0 chrUextra 12567951 12568687 -16435969 + STALKER4_I LTR Gypsy 3860 4644 -1886 9 680 5474 0 0 38 chrUextra 12568832 12569523 -16435133 + LSU-rRNA_Dme rRNA rRNA 1 665 -3235 9 680 1456 329 17 2 chrUextra 12569759 12570353 -16434303 + Gypsy6_I LTR Gypsy 945 1547 -5465 9 680 3029 171 15 22 chrUextra 12570459 12571194 -16433462 + SAR_DM Satellite Satellite 374 1103 -369 9 680 2598 48 22 11 chrUextra 12571295 12571651 -16433005 + R1_DM LINE R1 1878 2237 -3119 9 680 553 33 275 0 chrUextra 12571733 12571824 -16432832 - Gypsy6A_LTR LTR Gypsy -234 186 71 9 680 971 122 48 27 chrUextra 12571842 12572028 -16432628 + R1_DM LINE R1 1 190 -5166 9 680 2251 10 64 91 chrUextra 12572131 12572461 -16432195 - MICROPIA_LTR LTR Gypsy -155 321 1 9 680 3256 12 0 5 chrUextra 12572461 12572867 -16431789 - MICROPIA_I LTR Gypsy 0 4476 4073 9 680 405 204 0 17 chrUextra 12572967 12573082 -16431574 + XDMR_DM Unknown Unknown 248 360 0 9 680 2869 192 6 17 chrUextra 12573005 12573703 -16430953 - SAR_DM Satellite Satellite -361 1111 422 9 680 645 302 22 15 chrUextra 12574032 12574537 -16430119 + Gypsy4_I LTR Gypsy 2255 3232 -3780 9 680 5570 34 43 0 chrUextra 12574639 12575375 -16429281 - FW_DM LINE Jockey -1268 3424 2657 9 680 2975 176 16 27 chrUextra 12575475 12576209 -16428447 + SAR_DM Satellite Satellite 434 1159 -313 9 680 3228 181 7 8 chrUextra 12576311 12577045 -16427611 - SAR_DM Satellite Satellite -468 1004 272 9 680 5932 30 1 1 chrUextra 12577983 12578719 -16425937 - MAX_I LTR Pao -4479 3435 2700 9 680 1889 119 48 44 chrUextra 12578821 12579328 -16425328 - Gypsy12_I LTR Gypsy -4605 941 366 9 680 1397 96 5 14 chrUextra 12579333 12579555 -16425101 - Gypsy12_LTR LTR Gypsy -71 2265 2046 9 680 34 24 0 0 chrUextra 12579695 12579736 -16424920 + AT_rich Low_complexity Low_complexity 1 41 0 9 680 6117 14 4 0 chrUextra 12580491 12581227 -16423429 - PROTOP DNA P -1156 3324 2586 9 680 1301 6 0 18 chrUextra 12581345 12581510 -16423146 - NTS_DM Other Other -78 162 1 9 680 1847 4 17 13 chrUextra 12581510 12581749 -16422907 - NTS_DM Other Other 0 240 1 9 680 1824 0 21 13 chrUextra 12581749 12581987 -16422669 - NTS_DM Other Other 0 240 1 9 680 467 0 66 40 chrUextra 12581987 12582063 -16422593 - NTS_DM Other Other 0 240 163 9 680 21 89 0 0 chrUextra 12582249 12582305 -16422351 + AT_rich Low_complexity Low_complexity 1 56 0 9 680 26 30 0 0 chrUextra 12582442 12582475 -16422181 + AT_rich Low_complexity Low_complexity 1 33 0 9 680 625 27 0 0 chrUextra 12582825 12582899 -16421757 - PROTOP_B DNA P 0 1153 1080 9 681 6002 3 0 0 chrUextra 12583022 12583735 -16420921 + LSU-rRNA_Dme rRNA rRNA 220 932 -2968 9 681 279 51 26 0 chrUextra 12583835 12583874 -16420782 + ARS406_DM Unknown Unknown 150 189 -164 9 681 1682 218 55 56 chrUextra 12583842 12584571 -16420085 - SAR_DM Satellite Satellite -625 727 1 9 681 5230 20 3 56 chrUextra 12584671 12585407 -16419249 + BATUMI_I LTR Pao 2492 3188 -4775 9 681 21 89 0 0 chrUextra 12585707 12585763 -16418893 + AT_rich Low_complexity Low_complexity 1 56 0 9 681 4018 2 2 0 chrUextra 12585782 12586243 -16418413 - SSU-rRNA_Dme rRNA rRNA 0 1995 1534 9 681 2562 226 31 6 chrUextra 12586375 12587055 -16417601 - TAHRE LINE telomeric -9223 1240 544 9 681 49 43 0 0 chrUextra 12587270 12587340 -16417316 + AT_rich Low_complexity Low_complexity 1 70 0 9 681 298 172 203 79 chrUextra 12587458 12587635 -16417021 + DNAREP1_DM LINE Penelope 16 214 -380 9 681 805 171 67 16 chrUextra 12587619 12587834 -16416822 - DNAREP1_DM LINE Penelope -262 332 117 9 681 2393 4 0 0 chrUextra 12588015 12588295 -16416361 + BLASTOPIA_I LTR Gypsy 4202 4481 0 9 681 1982 16 8 12 chrUextra 12588295 12588552 -16416104 + BLASTOPIA_LTR LTR Gypsy 1 256 -19 9 681 1128 124 0 0 chrUextra 12588554 12588732 -16415924 + (CATA)n Simple_repeat Simple_repeat 3 180 0 9 681 6381 1 1 0 chrUextra 12588851 12589587 -16415069 + DOC LINE Jockey 3255 3991 -734 9 681 1295 86 134 0 chrUextra 12589687 12589896 -16414760 - Gypsy3_I LTR Gypsy -1807 4370 4134 9 681 3742 91 4 0 chrUextra 12589895 12590423 -16414233 - Gypsy3_I LTR Gypsy -2936 3241 2712 9 681 1944 201 16 20 chrUextra 12590525 12590978 -16413678 + Gypsy5_I LTR Gypsy 3447 3897 -2612 9 681 806 198 32 0 chrUextra 12590988 12591175 -16413481 + Gypsy5_I LTR Gypsy 4364 4556 -1953 9 681 229 125 0 89 chrUextra 12591180 12591259 -16413397 + GA-rich Low_complexity Low_complexity 6 77 0 9 681 919 49 0 0 chrUextra 12591372 12591516 -16413140 + PROTOP DNA P 680 823 -3657 9 681 4672 22 0 0 chrUextra 12591511 12592095 -16412561 + PROTOP DNA P 3802 4385 -95 9 681 3038 192 7 8 chrUextra 12592197 12592927 -16411729 - SAR_DM Satellite Satellite -549 923 195 9 681 6297 0 3 0 chrUextra 12593031 12593767 -16410889 + ROO_I LTR Pao 4915 5652 -2604 9 681 3029 185 11 12 chrUextra 12593867 12594602 -16410054 + SAR_DM Satellite Satellite 261 994 -478 9 681 2593 192 59 14 chrUextra 12594703 12595439 -16409217 + SAR_DM Satellite Satellite 1 769 -208 9 681 6388 3 0 0 chrUextra 12595539 12596275 -16408381 + R1_DM LINE R1 1859 2594 -2762 9 681 6351 3 1 1 chrUextra 12596375 12597111 -16407545 - SSU-rRNA_Dme rRNA rRNA -794 1201 466 9 681 5769 15 1 0 chrUextra 12597211 12597947 -16406709 - QUASIMODO_I LTR Gypsy -620 5440 4704 9 681 2752 40 3 0 chrUextra 12598047 12598396 -16406260 - DIVER_I LTR Pao -2011 3632 3283 9 681 2744 42 6 3 chrUextra 12598426 12598783 -16405873 - STALKER4_LTR LTR Gypsy -3 399 42 9 681 6304 3 1 0 chrUextra 12598883 12599619 -16405037 - ROO_I LTR Pao -2422 5834 5098 9 681 5910 9 0 0 chrUextra 12599719 12600412 -16404244 + R1_DM LINE R1 4664 5356 0 9 681 344 0 0 0 chrUextra 12600415 12600455 -16404201 + LSU-rRNA_Dme rRNA rRNA 2642 2681 -1219 9 681 4945 103 34 0 chrUextra 12600555 12601291 -16403365 - Gypsy12_I LTR Gypsy -2367 3179 2419 9 681 251 130 0 0 chrUextra 12601391 12601437 -16403219 - ARS406_DM Unknown Unknown -307 46 1 9 681 3281 158 16 16 chrUextra 12601397 12602126 -16402530 + SAR_DM Satellite Satellite 246 974 -498 9 681 5977 19 0 0 chrUextra 12602229 12602963 -16401693 + MDG1_I LTR Gypsy 5104 5837 -759 9 681 21 89 0 0 chrUextra 12605237 12605293 -16399363 + AT_rich Low_complexity Low_complexity 1 56 0 9 681 1371 6 0 0 chrUextra 12605312 12605471 -16399185 - SSU-rRNA_Dme rRNA rRNA 0 1995 1837 9 681 6280 0 0 1 chrUextra 12605571 12606307 -16398349 + ROO_I LTR Pao 5635 6369 -1887 9 681 22 35 0 0 chrUextra 12606420 12606449 -16398207 + AT_rich Low_complexity Low_complexity 1 29 0 9 681 21 57 0 0 chrUextra 12606646 12606681 -16397975 + AT_rich Low_complexity Low_complexity 1 35 0 9 681 2025 0 0 0 chrUextra 12606681 12606921 -16397735 + ALUII_DM Unknown Unknown 1 240 0 9 681 3245 109 14 9 chrUextra 12607243 12607974 -16396682 - G2_DM LINE Jockey -2717 385 4 9 681 2243 0 0 8 chrUextra 12608079 12608347 -16396309 + DM297_LTR LTR Gypsy 149 414 0 9 681 3614 8 2 2 chrUextra 12608347 12608815 -16395841 + DM297_I LTR Gypsy 1 468 -5699 9 681 5071 70 37 7 chrUextra 12608915 12609651 -16395005 - QUASIMODO_I LTR Gypsy -4917 1143 386 9 681 5892 30 0 0 chrUextra 12610587 12611323 -16393333 + R1_DM LINE R1 2406 3141 -2215 9 681 525 152 37 67 chrUextra 12611423 12611557 -16393099 - Gypsy5_LTR LTR Gypsy -224 206 77 9 681 583 73 0 0 chrUextra 12611561 12611643 -16393013 - Jockey2 LINE Jockey -3346 82 1 9 681 1302 196 29 57 chrUextra 12611774 12612159 -16392497 - Gypsy_LTR LTR Gypsy -51 431 58 9 681 3452 184 8 9 chrUextra 12612259 12612995 -16391661 - SAR_DM Satellite Satellite -501 971 237 9 681 1229 126 5 45 chrUextra 12613253 12613477 -16391179 + Gypsy12_I LTR Gypsy 374 588 -4958 9 681 599 90 0 0 chrUextra 12613745 12613823 -16390833 + Gypsy12_I LTR Gypsy 812 889 -4657 9 681 549 0 0 0 chrUextra 12613931 12613990 -16390666 + LSU-rRNA_Dme rRNA rRNA 3842 3900 0 9 681 268 196 0 19 chrUextra 12614091 12614143 -16390513 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 681 268 196 0 19 chrUextra 12614183 12614235 -16390421 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 681 278 176 0 19 chrUextra 12614266 12614318 -16390338 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 681 22 56 0 0 chrUextra 12614331 12614367 -16390289 + AT_rich Low_complexity Low_complexity 1 36 0 9 681 936 9 0 27 chrUextra 12614393 12614505 -16390151 + NTS_DM Other Other 25 133 -107 9 681 1286 19 0 12 chrUextra 12614505 12614667 -16389989 + NTS_DM Other Other 38 197 -43 9 681 880 42 34 8 chrUextra 12614767 12614886 -16389770 - Gypsy12_I LTR Gypsy -5424 122 1 9 681 389 211 41 34 chrUextra 12614900 12615047 -16389609 - Gypsy12A_LTR LTR Gypsy -553 1727 1580 9 681 1323 183 88 24 chrUextra 12615101 12615431 -16389225 - Gypsy12_LTR LTR Gypsy -828 1508 1158 9 681 3380 184 12 10 chrUextra 12615603 12616335 -16388321 - SAR_DM Satellite Satellite -493 979 246 9 681 1080 21 7 7 chrUextra 12616439 12616584 -16388072 + NTS_DM Other Other 57 201 -39 9 681 936 9 0 27 chrUextra 12616636 12616748 -16387908 + NTS_DM Other Other 25 133 -107 9 681 1558 15 20 20 chrUextra 12616748 12616951 -16387705 + NTS_DM Other Other 38 240 0 9 681 1871 5 13 13 chrUextra 12616951 12617175 -16387481 + NTS_DM Other Other 1 224 -16 9 681 2179 0 0 4 chrUextra 12617277 12617526 -16387130 - LINEJ1_DM LINE Jockey -13 5007 4760 9 681 2978 115 1 4 chrUextra 12618250 12618700 -16385956 + Jockey2 LINE Jockey 1419 1820 -1608 9 681 514 43 570 0 chrUextra 12618688 12618845 -16385811 - PROTOP_B DNA P -297 856 610 9 681 5550 63 20 4 chrUextra 12618947 12619682 -16384974 + R1_DM LINE R1 108 854 -4502 9 681 729 200 6 19 chrUextra 12619815 12619973 -16384683 + HETRP_DM Satellite Satellite 1529 1684 -188 9 681 690 197 13 26 chrUextra 12620097 12620253 -16384403 + HETRP_DM Satellite Satellite 1529 1682 -190 9 681 703 193 7 14 chrUextra 12620374 12620516 -16384140 + HETRP_DM Satellite Satellite 1529 1669 -203 9 681 1832 19 5 0 chrUextra 12620619 12620827 -16383829 - TRANSPAC_I LTR Gypsy -4381 209 1 9 681 3075 3 0 0 chrUextra 12620827 12621157 -16383499 - TRANSPAC_LTR LTR Gypsy 0 330 1 9 681 685 12 0 36 chrUextra 12621157 12621240 -16383416 - NTS_DM Other Other -136 104 25 9 681 22 56 0 0 chrUextra 12621266 12621302 -16383354 + AT_rich Low_complexity Low_complexity 1 36 0 9 681 249 150 0 0 chrUextra 12621315 12621355 -16383301 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 681 6631 18 0 0 chrUextra 12621455 12622191 -16382465 - Gypsy4_I LTR Gypsy -2117 4171 3436 9 681 1323 7 0 0 chrUextra 12622291 12622440 -16382216 - MICROPIA_LTR LTR Gypsy -96 380 232 9 681 2059 9 0 0 chrUextra 12622469 12622695 -16381961 - MICROPIA_LTR LTR Gypsy -244 232 7 9 681 2070 29 270 12 chrUextra 12622690 12623027 -16381629 + R1_DM LINE R1 650 1073 -4283 9 681 6753 8 1 0 chrUextra 12623127 12623863 -16380793 + BS LINE Jockey 2342 3078 -2048 9 681 6472 22 0 0 chrUextra 12623963 12624699 -16379957 + MAX_I LTR Pao 4629 5364 -2550 9 681 2492 48 194 0 chrUextra 12624799 12625166 -16379490 - PROTOP DNA P -3554 926 489 9 681 393 163 607 7 chrUextra 12625383 12625535 -16379121 + TAHRE LINE telomeric 7309 7551 -2912 9 681 6260 26 7 1 chrUextra 12625635 12626371 -16378285 + R1_DM LINE R1 1485 2224 -3132 9 681 6481 5 0 0 chrUextra 12626472 12627207 -16377449 + ROVER-I_DM LTR Gypsy 1672 2406 -4178 9 681 5958 7 46 6 chrUextra 12627309 12628041 -16376615 - FB4_DM DNA Tc1 -127 3962 3201 9 681 2693 237 9 12 chrUextra 12628172 12628875 -16375781 - Gypsy6_I LTR Gypsy -1694 5318 4099 9 681 6212 26 0 12 chrUextra 12628979 12629715 -16374941 + FW_DM LINE Jockey 963 1689 -3003 9 681 607 284 16 16 chrUextra 12629838 12630085 -16374571 + TV1I LTR Gypsy 712 958 -5005 9 681 892 62 0 0 chrUextra 12631275 12631387 -16373269 + PROTOP_B DNA P 74 185 -968 9 681 21 89 0 0 chrUextra 12631866 12631922 -16372734 + AT_rich Low_complexity Low_complexity 1 56 0 9 681 29 47 0 0 chrUextra 12631960 12632003 -16372653 + AT_rich Low_complexity Low_complexity 1 43 0 9 681 27 81 0 0 chrUextra 12632049 12632111 -16372545 + AT_rich Low_complexity Low_complexity 1 62 0 9 681 4579 83 76 7 chrUextra 12633159 12633893 -16370763 + Gypsy7_I LTR Gypsy 3187 4195 -1665 9 681 21 0 0 0 chrUextra 12635306 12635327 -16369329 + AT_rich Low_complexity Low_complexity 1 21 0 9 681 32 0 0 0 chrUextra 12636766 12636798 -16367858 + AT_rich Low_complexity Low_complexity 1 32 0 9 681 2832 7 3 0 chrUextra 12636930 12637239 -16367417 + SSU-rRNA_Dme rRNA rRNA 1 310 -1685 9 681 483 18 0 0 chrUextra 12637786 12637842 -16366814 + (TG)n Simple_repeat Simple_repeat 1 56 0 9 681 3633 57 4 4 chrUextra 12638175 12638633 -16366023 - R1_DM LINE R1 -4898 458 1 9 681 2217 16 0 0 chrUextra 12638666 12638911 -16365745 - R1_DM LINE R1 0 5356 5112 9 681 2964 94 74 2 chrUextra 12639011 12639510 -16365146 + Gypsy12_I LTR Gypsy 5010 5544 -2 9 681 1237 167 13 26 chrUextra 12639513 12639746 -16364910 + Gypsy12_LTR LTR Gypsy 2 231 -2105 9 681 2273 196 15 5 chrUextra 12640683 12641419 -16363237 - SAR_DM Satellite Satellite -589 742 1 9 681 2143 107 0 6 chrUextra 12641519 12641847 -16362809 - R1_DM LINE R1 -4457 899 574 9 681 1055 108 29 29 chrUextra 12641848 12642020 -16362636 - R1_DM LINE R1 -5184 172 1 9 681 1572 71 0 32 chrUextra 12642038 12642255 -16362401 + Gypsy6A_LTR LTR Gypsy 71 280 -140 9 681 1467 0 0 0 chrUextra 12642355 12642518 -16362138 + (TAGA)n Simple_repeat Simple_repeat 1 163 0 9 681 2702 93 6 33 chrUextra 12643203 12643682 -16360974 - DMSAT6 Satellite Satellite 0 470 5 9 681 2691 141 12 68 chrUextra 12643698 12644760 -16359896 - DMSAT6 Satellite Satellite 0 1002 1 9 681 2495 0 0 0 chrUextra 12644863 12645130 -16359526 - FW_DM LINE Jockey -4425 267 1 9 681 2168 179 9 11 chrUextra 12645137 12645599 -16359057 - SAR_DM Satellite Satellite -568 904 444 9 681 3326 202 14 24 chrUextra 12645701 12646433 -16358223 + SAR_DM Satellite Satellite 1 724 -221 9 681 6264 25 7 1 chrUextra 12646535 12647271 -16357385 - R1_DM LINE R1 -1403 3953 3214 9 681 3462 172 14 11 chrUextra 12647374 12648097 -16356559 + SAR_DM Satellite Satellite 352 1076 -396 9 681 1558 15 24 19 chrUextra 12648207 12648413 -16356243 + NTS_DM Other Other 34 240 0 9 681 1696 20 0 5 chrUextra 12648413 12648615 -16356041 + NTS_DM Other Other 1 201 -39 9 681 908 18 0 27 chrUextra 12648667 12648779 -16355877 + NTS_DM Other Other 25 133 -107 9 681 1330 25 0 6 chrUextra 12648779 12648943 -16355713 + NTS_DM Other Other 38 200 -40 9 681 6445 18 0 1 chrUextra 12649043 12649779 -16354877 + FW_DM LINE Jockey 267 1001 -3691 9 681 1865 17 17 17 chrUextra 12649879 12650116 -16354540 + NTS_DM Other Other 4 240 0 9 681 1194 15 0 0 chrUextra 12650116 12650249 -16354407 + NTS_DM Other Other 1 133 -107 9 681 1350 18 0 6 chrUextra 12650249 12650414 -16354242 + NTS_DM Other Other 38 201 -39 9 681 936 9 0 27 chrUextra 12650467 12650579 -16354077 + NTS_DM Other Other 25 133 -107 9 681 339 0 0 0 chrUextra 12650579 12650615 -16354041 + NTS_DM Other Other 38 73 -167 9 681 6658 4 38 0 chrUextra 12650715 12651451 -16353205 - CIRCE LINE Composite -5525 831 68 9 681 6648 4 0 0 chrUextra 12652387 12653123 -16351533 + R1_DM LINE R1 2416 3151 -2205 9 681 2296 8 0 0 chrUextra 12653223 12653471 -16351185 + DMLTR5 LTR Gypsy 19 266 0 9 681 4466 0 0 0 chrUextra 12653470 12653959 -16350697 + HMSBEAGLE_I LTR Gypsy 1 489 -6040 9 681 3072 197 15 23 chrUextra 12654062 12654795 -16349861 - SAR_DM Satellite Satellite -300 1172 446 9 681 6293 12 8 4 chrUextra 12654895 12655631 -16349025 + BLOOD_I LTR Gypsy 4813 5551 -1062 9 681 1620 0 0 0 chrUextra 12656283 12656463 -16348193 + (ATCG)n Simple_repeat Simple_repeat 1 180 0 9 681 329 324 16 60 chrUextra 12656579 12656900 -16347756 + BURDOCK_I LTR Gypsy 851 992 -4868 9 681 2847 203 9 10 chrUextra 12657406 12658139 -16346517 - SAR_DM Satellite Satellite -281 1191 192 9 681 3561 159 16 23 chrUextra 12658240 12658975 -16345681 + SAR_DM Satellite Satellite 378 1107 -365 9 681 6643 15 1 0 chrUextra 12659075 12659811 -16344845 + Invader1_I LTR Gypsy 291 1027 -2159 9 681 1134 0 0 0 chrUextra 12659911 12660037 -16344619 + (TTGTG)n Simple_repeat Simple_repeat 2 127 0 9 681 3646 2 0 2 chrUextra 12660037 12660437 -16344219 + STALKER4_LTR LTR Gypsy 4 402 0 9 681 1534 0 0 57 chrUextra 12660437 12660647 -16344009 + STALKER4_I LTR Gypsy 1 198 -6332 9 681 850 10 0 29 chrUextra 12660747 12660849 -16343807 - NTS_DM Other Other -117 123 25 9 681 1350 18 0 6 chrUextra 12660901 12661066 -16343590 - NTS_DM Other Other -39 201 38 9 681 917 18 0 27 chrUextra 12661066 12661178 -16343478 - NTS_DM Other Other -107 133 25 9 681 22 56 0 0 chrUextra 12661205 12661241 -16343415 + AT_rich Low_complexity Low_complexity 1 36 0 9 681 278 176 0 19 chrUextra 12661254 12661306 -16343350 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 681 268 196 0 19 chrUextra 12661337 12661389 -16343267 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 681 268 196 0 19 chrUextra 12661429 12661481 -16343175 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 681 2796 7 3 0 chrUextra 12661583 12661890 -16342766 + LSU-rRNA_Dme rRNA rRNA 2048 2355 -1545 9 681 3890 5 0 2 chrUextra 12661887 12662319 -16342337 + R2_DM LINE R2 561 991 -2616 9 681 6281 22 38 1 chrUextra 12662419 12663155 -16341501 + R1_DM LINE R1 4425 5187 -169 9 681 6482 19 0 0 chrUextra 12663256 12663991 -16340665 + FW_DM LINE Jockey 2385 3119 -1573 9 681 32 57 0 0 chrUextra 12664297 12664350 -16340306 + AT_rich Low_complexity Low_complexity 1 53 0 9 681 2930 37 5 45 chrUextra 12665263 12665663 -16338993 + CIRCE LINE Composite 4981 5364 -992 9 681 765 328 50 32 chrUextra 12665863 12666367 -16338289 + GTWIN_I LTR Gypsy 2320 2832 -3589 9 681 1407 36 68 0 chrUextra 12666307 12666499 -16338157 + TLD2 Unknown Unknown 1 205 -13 9 681 1063 0 0 0 chrUextra 12666599 12666716 -16337940 + Gypsy4_I LTR Gypsy 6172 6288 0 9 681 2313 45 3 37 chrUextra 12666716 12667013 -16337643 + Gypsy4_LTR LTR Gypsy 1 287 0 9 681 253 207 44 33 chrUextra 12667035 12667125 -16337531 + TIRANT_LTR LTR Gypsy 233 323 -94 9 681 550 230 0 0 chrUextra 12667141 12667267 -16337389 + Gypsy_I LTR Gypsy 6094 6219 -288 9 681 250 233 17 0 chrUextra 12667269 12667329 -16337327 + Gypsy_LTR LTR Gypsy 33 93 -389 9 681 1289 0 7 0 chrUextra 12667435 12667587 -16337069 + MDG3_LTR LTR Gypsy 115 267 0 9 681 5063 0 0 0 chrUextra 12667586 12668171 -16336485 + MDG3_I LTR Gypsy 1 585 -4401 9 681 2393 38 25 12 chrUextra 12668271 12668592 -16336064 + R1_DM LINE R1 1913 2237 -3119 9 681 611 42 221 0 chrUextra 12668674 12668769 -16335887 - Gypsy6A_LTR LTR Gypsy -234 186 71 9 681 1120 113 73 32 chrUextra 12668787 12669007 -16335649 + R1_DM LINE R1 1 229 -5127 9 681 5783 14 3 10 chrUextra 12669107 12669831 -16334825 - STALKER4_I LTR Gypsy -5215 1315 597 9 681 1008 77 0 0 chrUextra 12669943 12670099 -16334557 + (CAAGA)n Simple_repeat Simple_repeat 5 160 0 9 681 1371 39 0 0 chrUextra 12670099 12670276 -16334380 + (ACATG)n Simple_repeat Simple_repeat 3 180 0 9 681 995 36 65 62 chrUextra 12670276 12670600 -16334056 + (CAAGA)n Simple_repeat Simple_repeat 1 324 0 9 681 570 15 0 0 chrUextra 12670600 12670667 -16333989 + (CACGA)n Simple_repeat Simple_repeat 1 67 0 9 681 1823 178 1 12 chrUextra 12670779 12671183 -16333473 - STALKER4_I LTR Gypsy -6713 689 235 9 681 25 0 0 0 chrUextra 12671207 12671232 -16333424 + AT_rich Low_complexity Low_complexity 1 25 0 9 681 871 86 14 48 chrUextra 12671352 12671499 -16333157 - STALKER4_LTR LTR Gypsy -23 379 238 9 681 6354 0 1 0 chrUextra 12671614 12672348 -16332308 + DMRT1B LINE R1 3560 4294 -889 9 681 6299 5 0 0 chrUextra 12672448 12673183 -16331473 + FW_DM LINE Jockey 2981 3715 -977 9 681 2543 200 25 20 chrUextra 12673283 12674018 -16330638 - ROVER-I_DM LTR Gypsy -2602 3982 2929 9 681 488 119 36 0 chrUextra 12675032 12675116 -16329540 + NTS_DM Other Other 4 90 -150 9 681 28 48 0 0 chrUextra 12675389 12675431 -16329225 + AT_rich Low_complexity Low_complexity 1 42 0 9 681 1898 178 11 8 chrUextra 12675788 12676523 -16328133 + SAR_DM Satellite Satellite 1 736 -679 9 681 6193 0 1 3 chrUextra 12676623 12677358 -16327298 - R1_DM LINE R1 -3691 1665 932 9 681 22 35 0 0 chrUextra 12677520 12677549 -16327107 + AT_rich Low_complexity Low_complexity 1 29 0 9 681 37 39 0 0 chrUextra 12677650 12677701 -16326955 + AT_rich Low_complexity Low_complexity 1 51 0 9 681 28 48 0 0 chrUextra 12678057 12678099 -16326557 + AT_rich Low_complexity Low_complexity 1 42 0 9 681 6180 9 1 0 chrUextra 12678293 12679028 -16325628 + DOC2_DM LINE Jockey 2928 3663 -1130 9 681 2729 180 28 10 chrUextra 12679128 12679863 -16324793 - SAR_DM Satellite Satellite -267 1205 195 9 681 2828 201 7 8 chrUextra 12680801 12681508 -16323148 + SAR_DM Satellite Satellite 224 929 -543 9 681 1023 43 7 0 chrUextra 12681393 12681532 -16323124 - ARS406_DM Unknown Unknown -164 189 50 9 681 491 208 8 16 chrUextra 12681799 12681921 -16322735 - HETRP_DM Satellite Satellite -203 1669 1549 9 681 185 0 0 39 chrUextra 12681921 12681947 -16322709 + (TC)n Simple_repeat Simple_repeat 2 26 0 9 681 286 194 15 15 chrUextra 12682078 12682146 -16322510 - HETRP_DM Satellite Satellite -203 1669 1602 9 681 1894 9 0 0 chrUextra 12682145 12682368 -16322288 + G6_DM LINE Jockey 1 223 -1819 9 681 5451 62 1 5 chrUextra 12682468 12683203 -16321453 - BATUMI_I LTR Pao -3883 4080 3349 9 681 22 88 0 0 chrUextra 12683818 12683875 -16320781 + AT_rich Low_complexity Low_complexity 1 57 0 9 681 1219 0 0 7 chrUextra 12683894 12684038 -16320618 - SSU-rRNA_Dme rRNA rRNA 0 1995 1853 9 681 2963 187 16 26 chrUextra 12684138 12684872 -16319784 + SAR_DM Satellite Satellite 1 726 -208 9 681 1380 6 0 24 chrUextra 12684973 12685142 -16319514 + ACCORD2_LTR LTR Gypsy 51 215 0 9 681 1229 7 0 0 chrUextra 12685142 12685284 -16319372 - DIVER2_LTR LTR Pao -243 142 1 9 681 1872 52 0 92 chrUextra 12685284 12685578 -16319078 - CIRCE LINE Composite -5115 1241 975 9 681 1675 205 47 14 chrUextra 12685813 12686526 -16318130 + SAR_DM Satellite Satellite 1 736 -216 9 681 6306 3 1 0 chrUextra 12686645 12687378 -16317278 - R1_DM LINE R1 -2942 2414 1681 9 681 244 128 0 21 chrUextra 12687592 12687640 -16317016 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 9 681 5976 15 5 0 chrUextra 12688313 12689048 -16315608 - FW_DM LINE Jockey -1277 3415 2677 9 681 2874 179 16 19 chrUextra 12689148 12689883 -16314773 + SAR_DM Satellite Satellite 1 732 -281 9 681 6424 0 3 0 chrUextra 12689983 12690718 -16313938 - LSU-rRNA_Dme rRNA rRNA -175 3725 2989 9 681 3236 176 11 9 chrUextra 12690818 12691553 -16313103 - SAR_DM Satellite Satellite -484 988 253 9 681 2426 93 34 8 chrUextra 12691654 12692388 -16312268 - DMSAT6 Satellite Satellite -151 753 1 9 681 297 0 0 0 chrUextra 12693190 12693223 -16311433 + (TTCTC)n Simple_repeat Simple_repeat 4 36 0 9 681 1070 19 24 24 chrUextra 12693323 12693489 -16311167 + NTS_DM Other Other 75 240 0 9 681 1734 21 17 17 chrUextra 12693489 12693729 -16310927 + NTS_DM Other Other 1 240 0 9 681 1820 4 17 17 chrUextra 12693729 12693969 -16310687 + NTS_DM Other Other 1 240 0 9 681 695 23 0 11 chrUextra 12693969 12694058 -16310598 + NTS_DM Other Other 1 88 -152 9 681 21 89 0 0 chrUextra 12696263 12696319 -16308337 + AT_rich Low_complexity Low_complexity 1 56 0 9 681 1948 0 0 4 chrUextra 12696338 12696563 -16308093 - SSU-rRNA_Dme rRNA rRNA 0 1995 1772 9 681 5739 37 1 0 chrUextra 12697498 12698233 -16306423 + MDG1_I LTR Gypsy 3098 3833 -2763 9 681 516 200 0 0 chrUextra 12698922 12699067 -16305589 + T-rich Low_complexity Low_complexity 2 146 0 9 681 4726 0 0 42 chrUextra 12699307 12699903 -16304753 + LSU-rRNA_Dme rRNA rRNA 1 571 -3329 9 681 4176 108 63 27 chrUextra 12700007 12700738 -16303918 + TART LINE telomeric 9695 10451 -4026 9 681 5687 36 1 9 chrUextra 12700838 12701572 -16303084 - R1_DM LINE R1 -3897 1459 732 9 681 6149 14 1 1 chrUextra 12701673 12702406 -16302250 + R1_DM LINE R1 3929 4661 -695 9 681 3445 78 47 7 chrUextra 12702508 12703155 -16301501 - G2_DM LINE Jockey -2666 436 4 9 681 32 0 0 0 chrUextra 12703183 12703215 -16301441 + AT_rich Low_complexity Low_complexity 1 32 0 9 681 1453 0 0 21 chrUextra 12703343 12703536 -16301120 + STALKER4_I LTR Gypsy 6342 6530 0 9 681 3465 0 0 2 chrUextra 12703536 12703939 -16300717 + STALKER4_LTR LTR Gypsy 1 402 0 9 681 642 12 72 0 chrUextra 12703970 12704053 -16300603 + STALKER4_I LTR Gypsy 2229 2317 -4213 9 681 202 148 48 16 chrUextra 12704238 12704300 -16300356 + (TTA)n Simple_repeat Simple_repeat 2 65 0 9 681 22 35 0 0 chrUextra 12704588 12704617 -16300039 + AT_rich Low_complexity Low_complexity 1 29 0 9 681 206 194 32 0 chrUextra 12704811 12704873 -16299783 + (TTA)n Simple_repeat Simple_repeat 2 65 0 9 681 5894 37 0 7 chrUextra 12705013 12705748 -16298908 - BATUMI_I LTR Pao -1750 6213 5484 9 681 6101 3 0 0 chrUextra 12705848 12706583 -16298073 - DM297_I LTR Gypsy -473 5694 4960 9 681 2898 63 5 17 chrUextra 12706953 12707359 -16297297 - Baggins1 LINE LOA -262 5191 4791 9 681 1668 18 17 17 chrUextra 12707518 12707748 -16296908 - NTS_DM Other Other -10 230 1 9 681 1744 21 17 17 chrUextra 12707748 12707988 -16296668 - NTS_DM Other Other 0 240 1 9 681 1730 13 21 17 chrUextra 12707988 12708227 -16296429 - NTS_DM Other Other 0 240 1 9 681 2951 188 18 27 chrUextra 12708353 12709085 -16295571 + SAR_DM Satellite Satellite 1 725 -208 9 681 908 63 5 18 chrUextra 12709188 12709567 -16295089 - RSP Satellite Satellite -89 374 1 9 681 2488 58 3 3 chrUextra 12709594 12709923 -16294733 + G5_DM LINE Jockey 4 332 -4524 9 681 6033 18 1 1 chrUextra 12710023 12710758 -16293898 - R1_DM LINE R1 -1084 4272 3538 9 681 5121 57 52 15 chrUextra 12710858 12711593 -16293063 - R1_DM LINE R1 -4471 885 124 9 681 870 9 0 27 chrUextra 12711741 12711853 -16292803 + NTS_DM Other Other 25 133 -107 9 681 1252 18 0 6 chrUextra 12711853 12712018 -16292638 + NTS_DM Other Other 38 201 -39 9 681 870 9 0 27 chrUextra 12712070 12712182 -16292474 + NTS_DM Other Other 25 133 -107 9 681 1438 15 20 20 chrUextra 12712182 12712385 -16292271 + NTS_DM Other Other 38 240 0 9 681 331 47 0 0 chrUextra 12712385 12712428 -16292228 + NTS_DM Other Other 1 43 -197 9 681 1759 5 18 13 chrUextra 12712528 12712757 -16291899 - NTS_DM Other Other -10 230 1 9 681 1861 0 17 13 chrUextra 12712757 12712996 -16291660 - NTS_DM Other Other 0 240 1 9 681 1843 4 17 13 chrUextra 12712996 12713235 -16291421 - NTS_DM Other Other 0 240 1 9 85 6376 3 0 0 chrUextra 12713363 12714098 -16290558 - FW_DM LINE Jockey -431 4261 3527 9 682 28 0 0 0 chrUextra 12714265 12714293 -16290363 + AT_rich Low_complexity Low_complexity 1 28 0 9 682 34 24 0 0 chrUextra 12715378 12715419 -16289237 + AT_rich Low_complexity Low_complexity 1 41 0 9 682 21 95 0 0 chrUextra 12715632 12715695 -16288961 + AT_rich Low_complexity Low_complexity 1 63 0 9 682 467 17 0 16 chrUextra 12715707 12715768 -16288888 + LSU-rRNA_Dme rRNA rRNA 1 60 -3840 9 682 564 15 0 0 chrUextra 12715868 12715936 -16288720 - NTS_DM Other Other -135 105 38 9 682 817 0 0 0 chrUextra 12715936 12716032 -16288624 - NTS_DM Other Other -107 133 38 9 682 832 9 9 27 chrUextra 12716032 12716143 -16288513 - NTS_DM Other Other -107 133 25 9 682 21 57 0 0 chrUextra 12716169 12716204 -16288452 + AT_rich Low_complexity Low_complexity 1 35 0 9 682 1252 18 0 6 chrUextra 12716204 12716369 -16288287 - NTS_DM Other Other -39 201 38 9 682 855 18 0 34 chrUextra 12716369 12716487 -16288169 - NTS_DM Other Other -107 133 20 9 682 433 30 0 15 chrUextra 12716534 12716601 -16288055 - NTS_DM Other Other -39 201 136 9 682 4967 42 19 52 chrUextra 12716703 12717438 -16287218 + BATUMI_I LTR Pao 2310 3020 -4943 9 682 3568 45 47 2 chrUextra 12717554 12718044 -16286612 - PROTOP DNA P -3968 512 1 9 682 292 157 83 21 chrUextra 12718162 12718273 -16286383 - TART LINE telomeric -3988 10489 10404 9 682 3048 182 18 25 chrUextra 12719208 12719943 -16284713 - SAR_DM Satellite Satellite -611 729 1 9 682 6398 0 1 1 chrUextra 12720043 12720778 -16283878 + LSU-rRNA_Dme rRNA rRNA 2480 3214 -686 9 682 3251 97 2 2 chrUextra 12720878 12721384 -16283272 + S_DM DNA Tc1 1231 1736 0 9 682 5421 25 1 37 chrUextra 12721713 12722448 -16282208 + DOC2_DM LINE Jockey 319 1027 -3766 9 682 1749 169 95 32 chrUextra 12722559 12723283 -16281373 + SAR_DM Satellite Satellite 1 769 -678 9 682 5892 34 5 1 chrUextra 12723383 12724118 -16280538 + CIRCE LINE Composite 2760 3497 -2859 9 682 6239 4 1 1 chrUextra 12725053 12725788 -16278868 - R1_DM LINE R1 -1011 4345 3611 9 682 455 107 0 0 chrUextra 12725888 12725963 -16278693 - ARS406_DM Unknown Unknown -278 75 1 9 682 3062 188 7 6 chrUextra 12725901 12726614 -16278042 + SAR_DM Satellite Satellite 224 937 -535 9 682 1540 27 0 0 chrUextra 12726723 12726910 -16277746 - QUASIMODO_I LTR Gypsy -5873 187 1 9 682 4400 6 82 0 chrUextra 12726910 12727458 -16277198 - QUASIMODO_LTR LTR Gypsy 0 658 66 9 682 3842 23 39 0 chrUextra 12727558 12728041 -16276615 - FW_DM LINE Jockey -1071 3621 3120 9 682 24 77 0 0 chrUextra 12728393 12728445 -16276211 + AT_rich Low_complexity Low_complexity 1 52 0 9 682 1950 12 78 0 chrUextra 12729228 12729485 -16275171 - IDEFIX_LTR LTR Gypsy -317 277 1 9 682 256 100 0 0 chrUextra 12729453 12729493 -16275163 + BARI1 DNA Tc1 3 42 -1708 9 682 2082 56 24 113 chrUextra 12729502 12729963 -16274693 + BATUMI_I LTR Pao 603 1022 -6941 9 682 1698 35 35 11 chrUextra 12730063 12730323 -16274333 + Invader2_I LTR Gypsy 4327 4592 0 9 682 2209 26 0 0 chrUextra 12730323 12730589 -16274067 + Invader2_LTR LTR Gypsy 1 266 0 9 682 368 156 41 20 chrUextra 12730595 12730693 -16273963 + Gypsy12A_LTR LTR Gypsy 1634 1733 -547 9 682 728 76 0 0 chrUextra 12730693 12730798 -16273858 + Baggins1 LINE LOA 1 105 -5348 9 682 1870 9 0 0 chrUextra 12730898 12731117 -16273539 - MAX_LTR LTR Pao -102 219 1 9 682 4289 2 0 4 chrUextra 12731117 12731633 -16273023 - MAX_I LTR Pao 0 7914 7401 9 682 5875 27 22 0 chrUextra 12731733 12732468 -16272188 + R1_DM LINE R1 2809 3559 -1797 9 682 2953 182 25 11 chrUextra 12732570 12733298 -16271358 - SAR_DM Satellite Satellite -511 961 224 9 682 2261 61 13 0 chrUextra 12733425 12733738 -16270918 - PROTOP_B DNA P -43 1110 794 9 682 286 50 0 0 chrUextra 12733743 12733803 -16270853 - PROTOP_B DNA P -522 631 572 9 682 1110 32 225 52 chrUextra 12733796 12734138 -16270518 - PROTOP_B DNA P -217 936 536 9 682 4657 0 0 0 chrUextra 12734238 12734779 -16269877 + FW_DM LINE Jockey 4152 4692 0 9 682 1532 5 37 5 chrUextra 12734782 12734973 -16269683 + Gypsy4_I LTR Gypsy 3669 3865 -2423 9 682 5804 35 7 11 chrUextra 12735073 12735807 -16268849 - BS2 LINE Jockey -948 3773 3043 9 682 4657 2 4 0 chrUextra 12735908 12736454 -16268202 - QUASIMODO_LTR LTR Gypsy -110 548 1 9 682 748 112 0 0 chrUextra 12736479 12736613 -16268043 - S_DM DNA Tc1 0 1736 1603 9 682 6483 0 0 0 chrUextra 12736743 12737478 -16267178 - R2_DM LINE R2 -960 2647 1913 9 682 6266 5 0 0 chrUextra 12737578 12738313 -16266343 + DMRT1B LINE R1 1184 1918 -3265 9 682 753 0 20 10 chrUextra 12738413 12738514 -16266142 + ROO_LTR LTR Pao 327 428 0 9 682 3051 145 117 35 chrUextra 12738514 12739148 -16265508 - Gypsy3_I LTR Gypsy -1233 4944 4259 9 682 5394 51 1 8 chrUextra 12739248 12739983 -16264673 + R1_DM LINE R1 418 1147 -4209 9 682 5784 15 4 12 chrUextra 12740090 12740818 -16263838 + IVK_DM LINE I 1314 2035 -3367 9 682 6044 14 0 0 chrUextra 12740918 12741653 -16263003 - TART LINE telomeric -5323 9154 8420 9 682 6244 1 0 1 chrUextra 12741753 12742488 -16262168 + IVK_DM LINE I 2553 3286 -2116 9 682 5881 4 11 11 chrUextra 12742589 12743323 -16261333 + MDG1_I LTR Gypsy 252 985 -5611 9 682 5966 26 4 0 chrUextra 12743423 12744158 -16260498 - R1_DM LINE R1 -2051 3305 2568 9 682 6305 3 0 1 chrUextra 12744258 12744993 -16259663 - R1_DM LINE R1 -3291 2065 1332 9 682 2984 24 8 8 chrUextra 12745093 12745478 -16259178 - BATUMI_I LTR Pao -1152 6811 6427 9 682 2587 18 0 3 chrUextra 12745501 12745828 -16258828 + BATUMI_I LTR Pao 7303 7628 -335 9 682 2452 3 7 0 chrUextra 12745928 12746216 -16258440 + Invader1_LTR LTR Gypsy 134 423 0 9 682 1442 6 0 0 chrUextra 12746216 12746386 -16258270 + Copia2_LTR_DM LTR Copia 29 198 0 9 682 1352 43 19 28 chrUextra 12746763 12746978 -16257678 + NTS_DM Other Other 28 240 0 9 682 1625 42 17 17 chrUextra 12746978 12747217 -16257439 + NTS_DM Other Other 1 239 -1 9 682 1560 59 17 17 chrUextra 12747218 12747458 -16257198 + NTS_DM Other Other 1 240 0 9 682 332 25 0 0 chrUextra 12747458 12747498 -16257158 + NTS_DM Other Other 1 40 -200 9 682 6129 1 0 0 chrUextra 12747598 12748298 -16256358 + LSU-rRNA_Dme rRNA rRNA 1948 2647 -1253 9 682 279 0 0 26 chrUextra 12748295 12748333 -16256323 + R1_DM LINE R1 4921 4957 -399 9 682 34 24 0 0 chrUextra 12748808 12748849 -16255807 + AT_rich Low_complexity Low_complexity 1 41 0 9 682 21 95 0 0 chrUextra 12749062 12749125 -16255531 + AT_rich Low_complexity Low_complexity 1 63 0 9 682 268 0 0 0 chrUextra 12749136 12749168 -16255488 + LSU-rRNA_Dme rRNA rRNA 1 32 -3868 9 682 3544 0 0 57 chrUextra 12749268 12749726 -16254930 - LSU-rRNA_Dme rRNA rRNA -3468 432 1 9 682 21 95 0 0 chrUextra 12749738 12749801 -16254855 + AT_rich Low_complexity Low_complexity 1 63 0 9 682 4564 0 0 0 chrUextra 12750103 12750627 -16254029 - Copia_I LTR Copia -4069 524 1 9 682 1701 0 5 5 chrUextra 12750627 12750838 -16253818 - Copia_LTR LTR Copia 0 276 66 9 682 3939 39 107 0 chrUextra 12751101 12751673 -16252983 + PROTOP DNA P 1 633 -3847 9 682 436 0 0 0 chrUextra 12752137 12752187 -16252469 - CIRCE LINE Composite -1376 4980 4931 9 682 2624 28 3 0 chrUextra 12752187 12752508 -16252148 + R1_DM LINE R1 2277 2598 -2758 9 682 2162 128 14 12 chrUextra 12752608 12753343 -16251313 - DMSAT6 Satellite Satellite -230 736 1 9 682 5756 41 9 0 chrUextra 12754278 12755013 -16249643 - DMCR1A LINE CR1 -1534 2936 2195 9 682 3541 38 130 10 chrUextra 12755113 12755711 -16248945 - BLOOD_I LTR Gypsy -5943 670 1 9 682 5149 31 56 0 chrUextra 12755987 12756683 -16247973 + FW_DM LINE Jockey 1 735 -3957 9 682 2413 193 70 13 chrUextra 12756783 12757514 -16247142 + SAR_DM Satellite Satellite 1 772 -242 9 682 701 93 0 0 chrUextra 12757618 12757726 -16246930 - ARS406_DM Unknown Unknown -245 108 1 9 682 3057 174 13 16 chrUextra 12757633 12758344 -16246312 + SAR_DM Satellite Satellite 195 903 -569 9 682 6261 7 0 0 chrUextra 12758453 12759188 -16245468 - IDEFIX_I LTR Gypsy -3839 1789 1055 9 682 4587 112 1 0 chrUextra 12760190 12760858 -16243798 + HMSBEAGLE_I LTR Gypsy 1212 1880 -4649 9 682 229 155 51 17 chrUextra 12761024 12761083 -16243573 + (TA)n Simple_repeat Simple_repeat 2 62 0 9 682 1454 6 0 0 chrUextra 12761215 12761385 -16243271 - Copia2_LTR_DM LTR Copia 0 198 29 9 682 2430 7 78 0 chrUextra 12761385 12761693 -16242963 - Invader1_LTR LTR Gypsy 0 423 92 9 682 870 9 0 27 chrUextra 12761835 12761947 -16242709 + NTS_DM Other Other 25 133 -107 9 682 1252 18 0 6 chrUextra 12761947 12762112 -16242544 + NTS_DM Other Other 38 201 -39 9 682 852 18 0 27 chrUextra 12762164 12762276 -16242380 + NTS_DM Other Other 25 133 -107 9 682 1252 18 0 6 chrUextra 12762276 12762441 -16242215 + NTS_DM Other Other 38 201 -39 9 682 21 57 0 0 chrUextra 12762441 12762476 -16242180 + AT_rich Low_complexity Low_complexity 1 35 0 9 682 6322 1 1 1 chrUextra 12762628 12763363 -16241293 + STALKER4_I LTR Gypsy 3992 4726 -1804 9 682 3209 177 12 7 chrUextra 12763474 12764198 -16240458 - SAR_DM Satellite Satellite -411 1061 334 9 682 5206 53 2 5 chrUextra 12764298 12765033 -16239623 + Gypsy2_I LTR Gypsy 1713 3043 -3969 9 682 6285 7 0 1 chrUextra 12765133 12765868 -16238788 + Gypsy4_I LTR Gypsy 1008 1741 -4547 9 682 6251 10 0 0 chrUextra 12765968 12766700 -16237956 + Gypsy4_I LTR Gypsy 3992 4723 -1565 9 682 6130 4 3 3 chrUextra 12766803 12767538 -16237118 - R1_DM LINE R1 -1199 4157 3423 9 682 3164 160 18 17 chrUextra 12767641 12768352 -16236304 - SAR_DM Satellite Satellite -435 1037 326 9 682 1795 280 31 29 chrUextra 12769308 12770040 -16234616 + ROVER-I_DM LTR Gypsy 1043 1776 -4808 9 682 1675 9 18 14 chrUextra 12770143 12770366 -16234290 + NTS_DM Other Other 17 240 0 9 682 1850 4 17 13 chrUextra 12770366 12770605 -16234051 + NTS_DM Other Other 1 240 0 9 682 1809 4 17 17 chrUextra 12770605 12770845 -16233811 + NTS_DM Other Other 1 240 0 9 682 288 0 0 0 chrUextra 12770845 12770878 -16233778 + NTS_DM Other Other 1 33 -207 9 682 345 0 0 22 chrUextra 12770978 12771023 -16233633 + LSU-rRNA_Dme rRNA rRNA 1745 1788 -2112 9 682 5597 1 0 1 chrUextra 12771067 12771713 -16232943 + LSU-rRNA_Dme rRNA rRNA 1788 2432 -1468 9 682 2799 179 13 19 chrUextra 12771813 12772431 -16232225 + SAR_DM Satellite Satellite 435 1047 -425 9 682 221 0 35 0 chrUextra 12772431 12772460 -16232196 + (TTA)n Simple_repeat Simple_repeat 2 31 0 9 682 2799 179 13 19 chrUextra 12772460 12772530 -16232126 + SAR_DM Satellite Satellite 1048 1119 -353 9 682 285 179 34 45 chrUextra 12772530 12772548 -16232108 - XDMR_DM Unknown Unknown -16 344 258 9 682 5536 27 1 3 chrUextra 12772648 12773383 -16231273 - IDEFIX_I LTR Gypsy -118 5510 4777 9 682 21 89 0 0 chrUextra 12773997 12774053 -16230603 + AT_rich Low_complexity Low_complexity 1 56 0 9 682 1229 14 0 0 chrUextra 12774072 12774218 -16230438 - SSU-rRNA_Dme rRNA rRNA 0 1995 1850 9 682 4567 50 41 0 chrUextra 12774376 12775053 -16229603 + PROTOP DNA P 74 753 -3727 9 682 5865 0 4 0 chrUextra 12775153 12775888 -16228768 + DM412 LTR Gypsy 1164 1901 -4996 9 682 22 56 0 0 chrUextra 12775994 12776030 -16228626 + AT_rich Low_complexity Low_complexity 1 36 0 9 682 2312 156 32 12 chrUextra 12776184 12776722 -16227934 + TART LINE telomeric 8952 9435 -5042 9 682 1654 222 0 3 chrUextra 12776824 12777163 -16227493 + GTWIN_I LTR Gypsy 6084 6421 0 9 682 633 240 156 46 chrUextra 12777203 12777531 -16227125 + GTWIN_LTR LTR Gypsy 42 405 -90 9 682 1510 12 0 0 chrUextra 12777658 12777825 -16226831 + R1_DM LINE R1 4415 4581 -775 9 682 1904 8 17 13 chrUextra 12777875 12778114 -16226542 + NTS_DM Other Other 1 240 0 9 682 1930 4 17 13 chrUextra 12778114 12778353 -16226303 + NTS_DM Other Other 1 240 0 9 682 348 25 0 0 chrUextra 12778353 12778393 -16226263 + NTS_DM Other Other 1 40 -200 9 682 5366 51 1 25 chrUextra 12778508 12779228 -16225428 + Gypsy7_I LTR Gypsy 1 703 -4281 9 682 262 150 0 0 chrUextra 12779373 12779413 -16225243 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 682 262 150 0 0 chrUextra 12779465 12779505 -16225151 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 682 262 150 0 0 chrUextra 12779557 12779597 -16225059 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 682 22 56 0 0 chrUextra 12779602 12779638 -16225018 + AT_rich Low_complexity Low_complexity 1 36 0 9 682 3178 3 3 0 chrUextra 12779710 12780063 -16224593 - LSU-rRNA_Dme rRNA rRNA 0 3900 3547 9 682 4622 35 2 37 chrUextra 12780165 12780781 -16223875 + IDEFIX_LTR LTR Gypsy 1 594 0 9 682 6135 22 4 1 chrUextra 12780998 12781733 -16222923 + STALKER4_I LTR Gypsy 1858 2594 -3936 9 682 6620 1 1 1 chrUextra 12781833 12782568 -16222088 + LSU-rRNA_Dme rRNA rRNA 2235 2969 -931 9 682 549 15 15 0 chrUextra 12782668 12782733 -16221923 + R1_DM LINE R1 5291 5356 0 9 682 4995 5 0 2 chrUextra 12782740 12783298 -16221358 + R1_DM LINE R1 4800 5356 0 9 682 974 9 0 0 chrUextra 12783296 12783403 -16221253 + LSU-rRNA_Dme rRNA rRNA 2640 2746 -1154 9 682 2919 206 17 20 chrUextra 12783507 12784237 -16220419 - SAR_DM Satellite Satellite -620 727 1 9 682 6713 1 0 0 chrUextra 12784338 12785072 -16219584 + DOC LINE Jockey 3576 4309 -416 9 682 3095 177 20 29 chrUextra 12785172 12785905 -16218751 - SAR_DM Satellite Satellite -321 1151 425 9 682 306 0 0 0 chrUextra 12786702 12786736 -16217920 + (GAGAA)n Simple_repeat Simple_repeat 2 35 0 9 682 22 56 0 0 chrUextra 12786887 12786923 -16217733 + AT_rich Low_complexity Low_complexity 1 36 0 9 682 262 150 0 0 chrUextra 12786928 12786968 -16217688 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 682 262 150 0 0 chrUextra 12787020 12787060 -16217596 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 682 262 150 0 0 chrUextra 12787112 12787152 -16217504 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 682 269 125 0 0 chrUextra 12787195 12787235 -16217421 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 682 22 56 0 0 chrUextra 12787248 12787284 -16217372 + AT_rich Low_complexity Low_complexity 1 36 0 9 682 907 9 0 27 chrUextra 12787310 12787422 -16217234 + NTS_DM Other Other 25 133 -107 9 682 1198 20 0 7 chrUextra 12787422 12787574 -16217082 + NTS_DM Other Other 38 188 -52 9 682 22 35 0 0 chrUextra 12788146 12788175 -16216481 + AT_rich Low_complexity Low_complexity 1 29 0 9 682 6501 4 1 1 chrUextra 12788508 12789242 -16215414 + R1_DM LINE R1 124 857 -4499 9 682 1164 20 0 7 chrUextra 12789342 12789490 -16215166 - NTS_DM Other Other -56 184 38 9 682 907 9 0 27 chrUextra 12789490 12789602 -16215054 - NTS_DM Other Other -107 133 25 9 682 22 56 0 0 chrUextra 12789628 12789664 -16214992 + AT_rich Low_complexity Low_complexity 1 36 0 9 682 269 125 0 0 chrUextra 12789677 12789717 -16214939 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 682 262 150 0 0 chrUextra 12789760 12789800 -16214856 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 682 262 150 0 0 chrUextra 12789852 12789892 -16214764 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 682 262 150 0 0 chrUextra 12789944 12789984 -16214672 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 682 27 29 0 0 chrUextra 12789989 12790023 -16214633 + AT_rich Low_complexity Low_complexity 1 34 0 9 682 1528 0 11 11 chrUextra 12791010 12791195 -16213461 + LSU-rRNA_Dme rRNA rRNA 1604 1788 -2112 9 682 4595 4 0 0 chrUextra 12791239 12791744 -16212912 + LSU-rRNA_Dme rRNA rRNA 1788 2292 -1608 9 682 1263 26 0 13 chrUextra 12791844 12792001 -16212655 - DM297_I LTR Gypsy -6012 155 1 9 682 3523 5 7 7 chrUextra 12792001 12792415 -16212241 - DM297_LTR LTR Gypsy 0 414 1 9 682 661 174 0 12 chrUextra 12792415 12792578 -16212078 + (TA)n Simple_repeat Simple_repeat 1 161 0 9 682 6174 1 0 0 chrUextra 12792685 12793412 -16211244 + DM176_I LTR Gypsy 5338 6064 -356 9 682 3032 187 20 25 chrUextra 12793513 12794246 -16210410 - SAR_DM Satellite Satellite -300 1172 443 9 682 5778 31 0 1 chrUextra 12794346 12795080 -16209576 - DM297_I LTR Gypsy -4466 1701 969 9 682 23 68 0 0 chrUextra 12795360 12795404 -16209252 + AT_rich Low_complexity Low_complexity 1 44 0 9 682 26 30 0 0 chrUextra 12795450 12795483 -16209173 + AT_rich Low_complexity Low_complexity 1 33 0 9 682 432 19 19 0 chrUextra 12795861 12795914 -16208742 - PROTOP_B DNA P 0 1153 1100 9 682 2425 181 20 9 chrUextra 12796015 12796706 -16207950 - SAR_DM Satellite Satellite -414 699 1 9 682 3501 169 10 10 chrUextra 12796850 12797577 -16207079 - SAR_DM Satellite Satellite -425 1047 321 9 682 6041 25 55 0 chrUextra 12797682 12798416 -16206240 + R1_DM LINE R1 2257 3030 -2326 9 682 360 196 45 89 chrUextra 12798517 12798674 -16205982 + QUASIMODO_LTR LTR Gypsy 494 643 -15 9 682 580 288 16 16 chrUextra 12798909 12799156 -16205500 + TV1I LTR Gypsy 712 958 -5005 9 682 2599 68 35 38 chrUextra 12799670 12800069 -16204587 + CIRCE LINE Composite 4981 5378 -978 9 682 6347 18 0 0 chrUextra 12800186 12800918 -16203738 + FW_DM LINE Jockey 1452 2183 -2509 9 682 5250 3 1 48 chrUextra 12801852 12802586 -16202070 - DM412 LTR Gypsy -6304 593 1 9 682 3050 177 26 25 chrUextra 12802690 12803420 -16201236 - SAR_DM Satellite Satellite -313 1159 429 9 682 647 123 0 0 chrUextra 12803520 12803626 -16201030 - ARS406_DM Unknown Unknown -247 106 1 9 682 3152 184 14 15 chrUextra 12803533 12804254 -16200402 + SAR_DM Satellite Satellite 195 914 -558 9 682 2300 162 11 14 chrUextra 12804364 12805087 -16199569 + SAR_DM Satellite Satellite 1 720 -483 9 682 2737 166 8 1 chrUextra 12805188 12805919 -16198737 - SAR_DM Satellite Satellite -702 735 1 9 682 3377 167 18 8 chrUextra 12806023 12806735 -16197921 - SAR_DM Satellite Satellite -428 1044 326 9 682 195 42 0 0 chrUextra 12807566 12807590 -16197066 + (TC)n Simple_repeat Simple_repeat 1 24 0 9 682 6369 11 0 0 chrUextra 12807690 12808424 -16196232 + STALKER4_I LTR Gypsy 1365 2098 -4432 9 682 3043 208 11 18 chrUextra 12808524 12809255 -16195401 - SAR_DM Satellite Satellite -616 725 1 9 682 3673 97 188 4 chrUextra 12809358 12810092 -16194564 - TART LINE telomeric -6799 7678 6943 9 682 4709 0 0 2 chrUextra 12811037 12811556 -16193100 - NOMAD_LTR LTR Gypsy 0 518 1 9 682 42 0 0 0 chrUextra 12811556 12811598 -16193058 + AT_rich Low_complexity Low_complexity 1 42 0 9 682 551 0 131 6 chrUextra 12811598 12811758 -16192898 + (TA)n Simple_repeat Simple_repeat 1 180 0 9 682 629 305 21 21 chrUextra 12811860 12812148 -16192508 - TV1I LTR Gypsy -5078 885 598 9 682 2710 109 2 24 chrUextra 12812169 12812583 -16192073 - Gypsy12_I LTR Gypsy -4442 1104 700 9 682 645 312 17 61 chrUextra 12812988 12813285 -16191371 - Gypsy8_I LTR Gypsy -1905 2442 2159 9 682 602 209 136 37 chrUextra 12814362 12814576 -16190080 + XDMR_DM Unknown Unknown 126 360 0 9 682 2794 187 8 9 chrUextra 12814437 12815070 -16189586 - SAR_DM Satellite Satellite -649 823 192 9 682 841 90 0 0 chrUextra 12814974 12815096 -16189560 + ARS406_DM Unknown Unknown 1 122 -231 9 682 3198 85 123 36 chrUextra 12815245 12815796 -16188860 - MDG1_I LTR Gypsy -5462 1134 536 9 682 3431 169 14 11 chrUextra 12816030 12816761 -16187895 - SAR_DM Satellite Satellite -447 1025 293 9 682 6233 30 3 0 chrUextra 12817698 12818432 -16186224 + R1_DM LINE R1 4591 5326 -30 9 682 3273 178 25 10 chrUextra 12818539 12819266 -16185390 + SAR_DM Satellite Satellite 295 1032 -440 9 682 1477 0 0 0 chrUextra 12819939 12820100 -16184556 - SSU-rRNA_Dme rRNA rRNA 0 1995 1835 9 682 367 24 0 0 chrUextra 12820200 12820242 -16184414 - LSU-rRNA_Dme rRNA rRNA -1219 2681 2640 9 682 6141 7 0 3 chrUextra 12820240 12820934 -16183722 - R1_DM LINE R1 0 5356 4665 9 682 37 39 0 0 chrUextra 12821056 12821107 -16183549 + AT_rich Low_complexity Low_complexity 1 51 0 9 682 22 35 0 0 chrUextra 12821208 12821237 -16183419 + AT_rich Low_complexity Low_complexity 1 29 0 9 682 21 57 0 0 chrUextra 12821434 12821469 -16183187 + AT_rich Low_complexity Low_complexity 1 35 0 9 682 2067 8 0 0 chrUextra 12821469 12821709 -16182947 + ALUII_DM Unknown Unknown 1 240 0 9 682 1467 88 0 0 chrUextra 12821868 12822060 -16182596 + HMSBEAGLE_I LTR Gypsy 1628 1819 -4710 9 682 1904 157 79 81 chrUextra 12822050 12822507 -16182149 + HMSBEAGLE_I LTR Gypsy 2346 2801 -3728 9 682 489 217 0 0 chrUextra 12822506 12822598 -16182058 + HMSBEAGLE_I LTR Gypsy 3155 3246 -3283 9 682 6595 1 1 3 chrUextra 12822702 12823436 -16181220 - SSU-rRNA_Dme rRNA rRNA -635 1360 628 9 682 6659 3 0 0 chrUextra 12823536 12824270 -16180386 + R1_DM LINE R1 4147 4880 -476 9 682 6726 0 0 1 chrUextra 12824370 12825104 -16179552 + R2_DM LINE R2 1671 2403 -1204 9 682 6187 36 0 7 chrUextra 12825204 12825936 -16178720 - BATUMI_I LTR Pao -1690 6273 5547 9 682 784 31 45 30 chrUextra 12826038 12826171 -16178485 + NTS_DM Other Other 106 240 0 9 682 1813 21 17 17 chrUextra 12826171 12826411 -16178245 + NTS_DM Other Other 1 240 0 9 682 1813 21 17 17 chrUextra 12826411 12826651 -16178005 + NTS_DM Other Other 1 240 0 9 682 1053 16 0 0 chrUextra 12826651 12826772 -16177884 + NTS_DM Other Other 1 121 -119 9 682 224 185 31 0 chrUextra 12827144 12827209 -16177447 + (TAA)n Simple_repeat Simple_repeat 2 68 0 9 682 3209 2 31 7 chrUextra 12827711 12828130 -16176526 + HMSBEAGLE_I LTR Gypsy 368 796 -5733 9 682 633 51 42 17 chrUextra 12828130 12828250 -16176406 + (TTA)n Simple_repeat Simple_repeat 3 125 0 9 682 1532 0 0 5 chrUextra 12828250 12828440 -16176216 + HMSBEAGLE_I LTR Gypsy 976 1164 -5365 9 682 6601 1 0 3 chrUextra 12828540 12829274 -16175382 + FW_DM LINE Jockey 3571 4302 -390 9 682 6564 0 0 0 chrUextra 12829374 12830108 -16174548 - ROO_I LTR Pao -1643 6613 5880 9 682 2571 184 21 17 chrUextra 12830208 12830939 -16173717 + SAR_DM Satellite Satellite 1 733 -353 9 682 6293 25 19 0 chrUextra 12831042 12831776 -16172880 - DIVER_I LTR Pao -3892 1751 1004 9 682 1173 31 0 0 chrUextra 12831879 12832039 -16172617 + FW_DM LINE Jockey 4533 4692 0 9 682 4413 25 51 19 chrUextra 12832037 12832610 -16172046 - ROO_I LTR Pao -4051 4205 3615 9 682 2380 27 3 10 chrUextra 12832711 12833014 -16171642 + IDEFIX_LTR LTR Gypsy 294 594 0 9 682 25 0 0 0 chrUextra 12833204 12833229 -16171427 + AT_rich Low_complexity Low_complexity 1 25 0 9 682 5149 24 0 3 chrUextra 12834378 12835017 -16169639 - PROTOP DNA P -3843 637 1 9 682 28 48 0 0 chrUextra 12836136 12836178 -16168478 + AT_rich Low_complexity Low_complexity 1 42 0 9 682 488 119 36 0 chrUextra 12836452 12836536 -16168120 - NTS_DM Other Other -150 90 4 9 682 1021 8 0 22 chrUextra 12836646 12836780 -16167876 - NTS_DM Other Other -78 162 32 9 682 22 0 0 0 chrUextra 12837428 12837450 -16167206 + AT_rich Low_complexity Low_complexity 1 22 0 9 682 2325 0 0 0 chrUextra 12837714 12837982 -16166674 - G6_DM LINE Jockey -1774 268 1 9 682 3895 0 0 2 chrUextra 12837982 12838448 -16166208 + POGO DNA Pogo 1623 2087 -34 9 682 25 0 0 0 chrUextra 12838746 12838771 -16165885 + AT_rich Low_complexity Low_complexity 1 25 0 9 682 1698 41 0 0 chrUextra 12839064 12839282 -16165374 + IDEFIX_I LTR Gypsy 1 218 -5410 9 682 2347 228 27 15 chrUextra 12840220 12840949 -16163707 - G_DM LINE Jockey -441 1601 871 9 682 5974 23 3 0 chrUextra 12841053 12841784 -16162872 + G2_DM LINE Jockey 1657 2389 -713 9 682 4993 2 0 0 chrUextra 12841884 12842456 -16162200 + LSU-rRNA_Dme rRNA rRNA 2010 2581 -1319 9 682 1240 7 0 0 chrUextra 12842474 12842618 -16162038 + R2_DM LINE R2 1 144 -3463 9 682 3262 138 28 55 chrUextra 12842725 12843452 -16161204 + TART LINE telomeric 9534 10240 -4237 9 682 1899 0 4 0 chrUextra 12843552 12843779 -16160877 - BLASTOPIA_I LTR Gypsy -4253 228 1 9 682 1982 16 8 12 chrUextra 12843785 12844042 -16160614 - BLASTOPIA_LTR LTR Gypsy -19 256 1 9 682 1179 117 0 0 chrUextra 12844048 12844228 -16160428 + (TATG)n Simple_repeat Simple_repeat 1 180 0 9 682 375 121 0 0 chrUextra 12844228 12844286 -16160370 + (TA)n Simple_repeat Simple_repeat 1 58 0 9 85 6333 4 0 1 chrUextra 12844386 12845120 -16159536 - LSU-rRNA_Dme rRNA rRNA -1069 2831 2099 9 683 4514 26 61 0 chrUextra 12845220 12845954 -16158702 + R1_DM LINE R1 4129 4907 -449 9 683 6188 12 0 1 chrUextra 12846054 12846788 -16157868 + DMRT1A LINE R1 3967 4699 -484 9 683 5836 27 22 3 chrUextra 12846888 12847622 -16157034 + R1_DM LINE R1 1608 2355 -3001 9 683 5409 30 30 0 chrUextra 12847722 12848456 -16156200 + PROTOP DNA P 484 1239 -3241 9 683 3437 173 18 7 chrUextra 12848556 12849290 -16155366 + DM412 LTR Gypsy 5370 6111 -786 9 683 3167 182 8 11 chrUextra 12849390 12850124 -16154532 - SAR_DM Satellite Satellite -491 981 250 9 683 1557 32 0 2 chrUextra 12850229 12850822 -16153834 + (TTA)n Simple_repeat Simple_repeat 1 591 0 9 683 346 55 5 111 chrUextra 12850826 12850919 -16153737 - MDG1_I LTR Gypsy 0 6596 6529 9 683 27 29 0 0 chrUextra 12850924 12850958 -16153698 + AT_rich Low_complexity Low_complexity 1 34 0 9 683 25 31 0 0 chrUextra 12851252 12851284 -16153372 + AT_rich Low_complexity Low_complexity 1 32 0 9 683 6312 0 0 0 chrUextra 12852726 12853460 -16151196 + FW_DM LINE Jockey 2825 3558 -1134 9 683 4426 9 3 15 chrUextra 12853560 12854146 -16150510 + Stalker2_I LTR Gypsy 1014 1592 -5810 9 683 6171 8 0 0 chrUextra 12854394 12855128 -16149528 - FW_DM LINE Jockey -2954 1738 1005 9 683 6295 7 1 0 chrUextra 12855228 12855962 -16148694 + FW_DM LINE Jockey 3634 4368 -324 9 683 1930 56 7 15 chrUextra 12856062 12856332 -16148324 + R1_DM LINE R1 1970 2237 -3119 9 683 645 31 219 0 chrUextra 12856413 12856509 -16148147 - Gypsy6A_LTR LTR Gypsy -233 187 71 9 683 1288 127 75 30 chrUextra 12856527 12856795 -16147861 + R1_DM LINE R1 1 280 -5076 9 683 979 58 0 0 chrUextra 12856896 12857033 -16147623 + MDG1_I LTR Gypsy 225 361 -6235 9 683 2989 68 15 7 chrUextra 12857030 12857490 -16147166 + MDG1_I LTR Gypsy 672 1135 -5461 9 683 632 0 0 0 chrUextra 12857555 12857629 -16147027 - Invader2_LTR LTR Gypsy 0 266 193 9 683 6373 3 0 0 chrUextra 12857730 12858464 -16146192 + TAHRE LINE telomeric 9545 10278 -185 9 683 6362 0 0 0 chrUextra 12858564 12859298 -16145358 + DOC LINE Jockey 2813 3546 -1179 9 683 3023 169 30 10 chrUextra 12859412 12860106 -16144550 + SAR_DM Satellite Satellite 369 1076 -396 9 683 3099 172 10 23 chrUextra 12860235 12860966 -16143690 - SAR_DM Satellite Satellite -361 1111 391 9 683 5264 52 38 3 chrUextra 12861067 12861800 -16142856 + R1_DM LINE R1 193 951 -4405 9 683 6195 0 1 1 chrUextra 12861900 12862634 -16142022 + LSU-rRNA_Dme rRNA rRNA 354 1087 -2813 9 683 6072 26 0 3 chrUextra 12862734 12863468 -16141188 + R2_DM LINE R2 1940 2671 -936 9 683 2119 181 8 6 chrUextra 12863578 12864297 -16140359 - SAR_DM Satellite Satellite -396 720 1 9 683 3348 0 0 0 chrUextra 12864402 12864795 -16139861 + FW_DM LINE Jockey 4300 4692 0 9 683 1386 160 60 13 chrUextra 12864820 12865136 -16139520 + SAR_DM Satellite Satellite 321 651 -821 9 683 1066 266 33 13 chrUextra 12865285 12865681 -16138975 + TIRANT_I LTR Gypsy 3444 3847 -3845 9 683 832 253 4 22 chrUextra 12865701 12865968 -16138688 + ZAM_I LTR Gypsy 3824 4085 -3405 9 683 6108 18 5 0 chrUextra 12866070 12866804 -16137852 - R1_DM LINE R1 -2950 2406 1669 9 683 1620 25 6 8 chrUextra 12867164 12867525 -16137131 + (TTCTC)n Simple_repeat Simple_repeat 1 359 0 9 683 433 144 63 0 chrUextra 12867525 12867636 -16137020 + CT-rich Low_complexity Low_complexity 5 122 0 9 683 6046 14 0 8 chrUextra 12867738 12868472 -16136184 + Gypsy4_I LTR Gypsy 777 1504 -4784 9 683 6156 18 9 0 chrUextra 12868572 12869306 -16135350 - Copia2_I LTR Copia -1755 2407 1667 9 683 3070 181 13 19 chrUextra 12869409 12870140 -16134516 + SAR_DM Satellite Satellite 1 726 -396 9 683 6256 3 3 0 chrUextra 12870240 12870974 -16133682 - DM176_I LTR Gypsy -5069 1351 616 9 683 2914 170 16 20 chrUextra 12871075 12871767 -16132889 - SAR_DM Satellite Satellite -593 879 191 9 683 6397 1 1 1 chrUextra 12871908 12872642 -16132014 - LSU-rRNA_Dme rRNA rRNA -282 3618 2885 9 683 5869 25 3 1 chrUextra 12872742 12873476 -16131180 - R1_DM LINE R1 -1338 4018 3284 9 683 6111 1 16 0 chrUextra 12873576 12874310 -16130346 + ROO_I LTR Pao 28 773 -7483 9 683 3122 170 8 14 chrUextra 12874417 12875134 -16129522 + SAR_DM Satellite Satellite 326 1038 -434 9 683 224 185 31 0 chrUextra 12875456 12875521 -16129135 + (TAA)n Simple_repeat Simple_repeat 2 68 0 9 683 6206 3 1 0 chrUextra 12876078 12876812 -16127844 - DM176_I LTR Gypsy -1666 4754 4020 9 683 551 0 124 12 chrUextra 12876915 12877076 -16127580 + (GA)n Simple_repeat Simple_repeat 2 180 0 9 683 1699 33 124 0 chrUextra 12877889 12878130 -16126526 + Baggins1 LINE LOA 4727 4997 -456 9 683 965 50 0 92 chrUextra 12878126 12878279 -16126377 + Baggins1 LINE LOA 5315 5453 0 9 683 6297 0 3 4 chrUextra 12878580 12879314 -16125342 - SSU-rRNA_Dme rRNA rRNA -146 1849 1117 9 683 2673 0 3 0 chrUextra 12879415 12879723 -16124933 + LSU-rRNA_Dme rRNA rRNA 2324 2632 -1268 9 683 3663 0 5 0 chrUextra 12879723 12880148 -16124508 + R1_DM LINE R1 1 427 -4929 9 683 4050 89 45 48 chrUextra 12880248 12880982 -16123674 + TART LINE telomeric 2622 3353 -11124 9 683 355 187 0 0 chrUextra 12881082 12881157 -16123499 - ARS406_DM Unknown Unknown -278 75 1 9 683 3038 170 29 19 chrUextra 12881095 12881814 -16122842 + SAR_DM Satellite Satellite 224 949 -523 9 683 4291 12 0 0 chrUextra 12881916 12882418 -16122238 + Gypsy4_I LTR Gypsy 5787 6288 0 9 683 1922 13 9 0 chrUextra 12882418 12882650 -16122006 + Gypsy4_LTR LTR Gypsy 1 234 -53 9 683 2622 3 0 0 chrUextra 12882750 12883057 -16121599 - MDG3_I LTR Gypsy -2333 2653 2347 9 683 3463 9 0 0 chrUextra 12883055 12883484 -16121172 - MDG3_I LTR Gypsy -2790 2196 1768 9 683 6376 4 0 0 chrUextra 12884418 12885152 -16119504 - BS2 LINE Jockey -355 4366 3633 9 683 6154 4 3 3 chrUextra 12885252 12885986 -16118670 - R1_DM LINE R1 -927 4429 3696 9 683 5929 14 4 1 chrUextra 12886920 12887654 -16117002 - ROO_I LTR Pao -4092 4164 3429 9 683 6172 0 1 1 chrUextra 12887754 12888488 -16116168 + STALKER4_I LTR Gypsy 660 1393 -5137 9 683 3459 46 33 10 chrUextra 12888588 12889068 -16115588 + BATUMI_I LTR Pao 6511 7001 -962 9 683 1876 252 59 52 chrUextra 12888592 12889320 -16115336 - MAX_I LTR Pao -744 7170 6438 9 683 5802 27 30 1 chrUextra 12889422 12890156 -16114500 - R1_DM LINE R1 -818 4538 3784 9 683 5997 0 16 1 chrUextra 12890256 12890990 -16113666 + ROO_I LTR Pao 119 863 -7393 9 683 4480 42 0 2 chrUextra 12891090 12891661 -16112995 + MDG1_I LTR Gypsy 3602 4171 -2425 9 683 1495 11 0 0 chrUextra 12891647 12891824 -16112832 + MDG1_I LTR Gypsy 4367 4543 -2053 9 683 6375 0 0 0 chrUextra 12891924 12892658 -16111998 - ROO_I LTR Pao -5285 2971 2238 9 683 831 113 249 0 chrUextra 12892758 12892935 -16111721 + TAHRE LINE telomeric 7619 7839 -6638 9 683 1696 95 50 45 chrUextra 12892938 12893325 -16111331 + TAHRE LINE telomeric 10186 10663 -3814 9 683 818 184 30 0 chrUextra 12893324 12893492 -16111164 + TAHRE LINE telomeric 7044 7216 -3247 9 683 752 25 32 32 chrUextra 12893592 12893717 -16110939 + NTS_DM Other Other 116 240 0 9 683 1726 17 17 21 chrUextra 12893717 12893958 -16110698 + NTS_DM Other Other 1 240 0 9 683 1734 21 17 17 chrUextra 12893958 12894198 -16110458 + NTS_DM Other Other 1 240 0 9 683 1042 0 0 8 chrUextra 12894198 12894323 -16110333 + NTS_DM Other Other 1 124 -116 9 683 24 0 0 0 chrUextra 12895310 12895334 -16109322 + AT_rich Low_complexity Low_complexity 1 24 0 9 683 1140 328 43 24 chrUextra 12896102 12896820 -16107836 + Gypsy2_I LTR Gypsy 3360 4091 -2044 9 683 6212 0 0 1 chrUextra 12896927 12897660 -16106996 - LSU-rRNA_Dme rRNA rRNA -2808 1092 361 9 683 2273 215 44 22 chrUextra 12897760 12898484 -16106172 + SAR_DM Satellite Satellite 419 1158 -314 9 683 6311 0 3 0 chrUextra 12898604 12899326 -16105330 - LSU-rRNA_Dme rRNA rRNA 0 3900 3177 9 683 2522 135 85 35 chrUextra 12900262 12900992 -16103664 + STALKER4_I LTR Gypsy 358 1172 -5358 9 683 6310 1 3 3 chrUextra 12901092 12901825 -16102831 - SSU-rRNA_Dme rRNA rRNA -117 1878 1146 9 683 488 119 36 0 chrUextra 12902080 12902164 -16102492 - NTS_DM Other Other -150 90 4 9 683 1301 6 0 18 chrUextra 12902274 12902439 -16102217 - NTS_DM Other Other -78 162 1 9 683 1614 9 23 14 chrUextra 12902439 12902658 -16101998 - NTS_DM Other Other 0 240 20 9 683 3557 2 2 0 chrUextra 12902758 12903173 -16101483 - LSU-rRNA_Dme rRNA rRNA -845 3055 2640 9 683 2711 9 3 0 chrUextra 12903171 12903491 -16101165 - R1_DM LINE R1 0 5356 5036 9 683 3022 8 2 27 chrUextra 12903591 12903993 -16100663 - PROTOP_A DNA P -267 838 447 9 683 2671 28 0 0 chrUextra 12904001 12904324 -16100332 - PROTOP_A DNA P -778 327 5 9 683 3050 188 7 10 chrUextra 12904424 12905149 -16099507 + SAR_DM Satellite Satellite 272 994 -478 9 683 2981 43 66 33 chrUextra 12905258 12905744 -16098912 + PROTOP_B DNA P 435 936 -217 9 683 286 50 0 0 chrUextra 12905737 12905797 -16098859 + PROTOP_B DNA P 572 631 -522 9 683 1319 58 16 0 chrUextra 12905802 12905990 -16098666 + PROTOP_B DNA P 794 984 -169 9 683 871 102 0 35 chrUextra 12906090 12906233 -16098423 - TART LINE telomeric -9017 5460 5323 9 683 1413 143 4 4 chrUextra 12906213 12906465 -16098191 - TART LINE telomeric -10594 3883 3632 9 683 629 12 75 0 chrUextra 12906463 12906543 -16098113 - PROTOP_B DNA P -1067 86 1 9 683 198 0 0 0 chrUextra 12906714 12906736 -16097920 + (CAA)n Simple_repeat Simple_repeat 2 23 0 9 683 6144 0 0 0 chrUextra 12906923 12907656 -16097000 - TABOR_I LTR Gypsy -5054 1282 550 9 683 5939 19 4 1 chrUextra 12907756 12908489 -16096167 - R1_DM LINE R1 -1429 3927 3193 9 683 629 0 43 32 chrUextra 12908589 12908683 -16095973 + NTS_DM Other Other 146 240 0 9 683 1847 4 17 13 chrUextra 12908683 12908922 -16095734 + NTS_DM Other Other 1 240 0 9 683 1301 6 0 18 chrUextra 12908922 12909087 -16095569 + NTS_DM Other Other 1 162 -78 9 683 476 131 36 0 chrUextra 12909197 12909281 -16095375 + NTS_DM Other Other 4 90 -150 9 683 1755 5 0 5 chrUextra 12909422 12909627 -16095029 - LSU-rRNA_Dme rRNA rRNA -1057 2843 2640 9 683 4630 0 0 0 chrUextra 12909625 12910155 -16094501 - R1_DM LINE R1 0 5356 4827 9 683 6257 1 0 4 chrUextra 12910255 12910988 -16093668 - DOC LINE Jockey -1784 2941 2212 9 683 293 263 32 0 chrUextra 12911088 12911183 -16093473 - Gypsy12_LTR LTR Gypsy -465 1871 1774 9 683 29 60 0 0 chrUextra 12911241 12911291 -16093365 + AT_rich Low_complexity Low_complexity 1 50 0 9 683 980 264 36 69 chrUextra 12911297 12911821 -16092835 - Gypsy12_LTR LTR Gypsy -1187 1149 643 9 683 5661 12 0 0 chrUextra 12911921 12912654 -16092002 + DM176_I LTR Gypsy 5600 6332 -88 9 683 22 35 0 0 chrUextra 12912874 12912903 -16091753 + AT_rich Low_complexity Low_complexity 1 29 0 9 683 21 57 0 0 chrUextra 12913100 12913135 -16091521 + AT_rich Low_complexity Low_complexity 1 35 0 9 683 1985 8 0 0 chrUextra 12913135 12913375 -16091281 + ALUII_DM Unknown Unknown 1 240 0 9 683 22 35 0 0 chrUextra 12913695 12913724 -16090932 + AT_rich Low_complexity Low_complexity 1 29 0 9 683 21 57 0 0 chrUextra 12913921 12913956 -16090700 + AT_rich Low_complexity Low_complexity 1 35 0 9 683 2025 0 0 0 chrUextra 12913956 12914196 -16090460 + ALUII_DM Unknown Unknown 1 240 0 9 683 3974 86 9 25 chrUextra 12914423 12915065 -16089591 - CIRCE LINE Composite -1436 4920 4289 9 683 520 51 0 93 chrUextra 12915067 12915153 -16089503 - CIRCE LINE Composite -2317 4039 3962 9 683 6340 1 3 1 chrUextra 12915254 12915986 -16088670 + SSU-rRNA_Dme rRNA rRNA 1168 1900 -95 9 683 3795 183 4 0 chrUextra 12916086 12916819 -16087837 + ROVER-I_DM LTR Gypsy 3532 4267 -2317 9 683 1241 6 0 30 chrUextra 12916990 12917157 -16087499 - NTS_DM Other Other -78 162 1 9 683 1847 4 17 13 chrUextra 12917157 12917396 -16087260 - NTS_DM Other Other 0 240 1 9 683 1843 4 17 13 chrUextra 12917396 12917635 -16087021 - NTS_DM Other Other 0 240 1 9 683 3202 174 9 18 chrUextra 12917752 12918485 -16086171 + SAR_DM Satellite Satellite 380 1106 -366 9 683 6303 1 0 0 chrUextra 12918585 12919318 -16085338 - R1_DM LINE R1 -1992 3364 2632 9 683 6206 11 0 0 chrUextra 12919418 12920151 -16084505 + DOC2_DM LINE Jockey 2920 3652 -1141 9 683 5187 2 0 2 chrUextra 12920390 12920984 -16083672 + SSU-rRNA_Dme rRNA rRNA 1 593 -1402 9 683 6243 3 0 1 chrUextra 12921084 12921815 -16082841 - R1_DM LINE R1 -1714 3642 2913 9 683 828 98 0 0 chrUextra 12921920 12922052 -16082604 - ARS406_DM Unknown Unknown -221 132 1 9 683 2884 183 12 10 chrUextra 12921959 12922649 -16082007 + SAR_DM Satellite Satellite 195 885 -587 9 683 5699 52 0 0 chrUextra 12922750 12923483 -16081173 - IDEFIX_I LTR Gypsy -3474 2154 1422 9 683 6272 8 0 0 chrUextra 12923583 12924316 -16080340 - R1_DM LINE R1 -481 4875 4143 9 683 1080 24 24 24 chrUextra 12924416 12924584 -16080072 + NTS_DM Other Other 73 240 0 9 683 1850 4 17 13 chrUextra 12924584 12924823 -16079833 + NTS_DM Other Other 1 240 0 9 683 1670 34 12 21 chrUextra 12924823 12925064 -16079592 + NTS_DM Other Other 1 239 -1 9 683 659 12 0 12 chrUextra 12925066 12925147 -16079509 + NTS_DM Other Other 1 80 -160 9 683 2369 101 20 12 chrUextra 12925249 12925982 -16078674 + DMSAT6 Satellite Satellite 1 739 -51 9 683 2521 34 47 0 chrUextra 12926495 12926815 -16077841 + PROTOP DNA P 1 335 -4145 9 683 1170 0 0 0 chrUextra 12926915 12927045 -16077611 + (GAGAA)n Simple_repeat Simple_repeat 2 131 0 9 683 326 0 22 0 chrUextra 12927748 12927793 -16076863 - DMCR1A LINE CR1 -463 4007 3962 9 683 3105 55 29 0 chrUextra 12927778 12928194 -16076462 - DOC3_DM LINE Jockey -1248 3492 3065 9 683 2346 28 0 0 chrUextra 12928195 12928481 -16076175 + PROTOP_A DNA P 1 286 -819 9 683 6441 1 0 0 chrUextra 12928581 12929314 -16075342 - R2_DM LINE R2 -1187 2420 1688 9 683 252 250 0 0 chrUextra 12929605 12929665 -16074991 + TV1I LTR Gypsy 5903 5962 -1 9 683 2785 182 21 28 chrUextra 12930250 12930972 -16073684 + SAR_DM Satellite Satellite 456 1172 -300 9 683 5922 22 1 1 chrUextra 12931080 12931813 -16072843 - R1_DM LINE R1 -1349 4007 3275 9 683 576 139 100 221 chrUextra 12931913 12932144 -16072512 + HOBO DNA hAT 114 316 -2700 9 683 1872 96 181 18 chrUextra 12932145 12932542 -16072114 + PROTOP_B DNA P 17 478 -675 9 683 726 111 0 8 chrUextra 12932519 12932646 -16072010 + HOBO DNA hAT 330 455 -2561 9 683 5814 26 0 14 chrUextra 12932746 12933479 -16071177 + FW_DM LINE Jockey 1250 1972 -2720 9 683 6369 1 3 0 chrUextra 12933579 12934312 -16070344 - MDG3_I LTR Gypsy -3537 1449 715 9 683 563 98 108 0 chrUextra 12934412 12934514 -16070142 - ARS406_DM Unknown Unknown -240 113 1 9 683 2893 183 42 6 chrUextra 12934432 12935145 -16069511 + SAR_DM Satellite Satellite 195 933 -539 9 683 2633 197 10 13 chrUextra 12935273 12935961 -16068695 - SAR_DM Satellite Satellite -411 1061 376 9 683 612 14 0 0 chrUextra 12936078 12936150 -16068506 - NTS_DM Other Other -168 72 1 9 683 1817 4 17 17 chrUextra 12936150 12936390 -16068266 - NTS_DM Other Other 0 240 1 9 683 1847 4 17 13 chrUextra 12936390 12936629 -16068027 - NTS_DM Other Other 0 240 1 9 683 1271 11 22 16 chrUextra 12936629 12936811 -16067845 - NTS_DM Other Other 0 240 58 9 683 4395 0 4 0 chrUextra 12937139 12937644 -16067012 - SSU-rRNA_Dme rRNA rRNA 0 1995 1489 9 683 5937 27 0 1 chrUextra 12937744 12938477 -16066179 + R1_DM LINE R1 2227 2958 -2398 9 683 1292 318 18 25 chrUextra 12938585 12939310 -16065346 - Invader6_I LTR Gypsy -1564 2535 1816 9 683 6234 3 1 3 chrUextra 12939410 12940143 -16064513 + G_DM LINE Jockey 2420 3151 -1195 9 683 5944 1 0 0 chrUextra 12940249 12940976 -16063680 + QUASIMODO_I LTR Gypsy 3303 4029 -2031 9 683 2751 3 0 0 chrUextra 12941495 12941809 -16062847 - ROO_LTR LTR Pao 0 428 115 9 683 6241 3 0 0 chrUextra 12941909 12942642 -16062014 + Copia_I LTR Copia 1360 2092 -2501 9 683 6432 3 0 0 chrUextra 12942742 12943475 -16061181 + SSU-rRNA_Dme rRNA rRNA 186 918 -1077 9 683 3534 21 0 0 chrUextra 12943575 12944001 -16060655 + NINJA_I LTR Pao 4189 4614 -1397 9 683 1852 62 4 15 chrUextra 12943985 12944245 -16060411 + NINJA_I LTR Pao 4755 5011 -1000 9 683 504 17 0 0 chrUextra 12944247 12944307 -16060349 + NINJA_I LTR Pao 5220 5279 -732 9 683 363 33 180 0 chrUextra 12944548 12944609 -16060047 + I_DM LINE I 5396 5467 -764 9 683 704 99 244 23 chrUextra 12944617 12944824 -16059832 - PROTOP_B DNA P -484 669 417 9 683 1700 35 269 0 chrUextra 12944828 12945141 -16059515 - DOC3_DM LINE Jockey 0 4740 4344 9 683 5723 35 14 0 chrUextra 12945241 12945974 -16058682 - MDG1_I LTR Gypsy -619 5977 5235 9 683 5977 22 0 1 chrUextra 12946074 12946798 -16057858 - R1_DM LINE R1 -67 5289 4567 9 683 5682 28 6 11 chrUextra 12946907 12947640 -16057016 + BATUMI_I LTR Pao 1782 2510 -5453 9 683 2316 45 52 0 chrUextra 12948998 12949306 -16055350 + PROTOP DNA P 1 324 -4156 9 683 782 127 0 15 chrUextra 12949407 12949543 -16055113 + DMLTR5 LTR Gypsy 133 266 0 9 683 1977 105 22 38 chrUextra 12949542 12949907 -16054749 + HMSBEAGLE_I LTR Gypsy 1 359 -6170 9 683 33 43 0 0 chrUextra 12949922 12949969 -16054687 + AT_rich Low_complexity Low_complexity 1 47 0 9 683 6276 11 1 0 chrUextra 12950241 12950972 -16053684 + LSU-rRNA_Dme rRNA rRNA 3062 3793 -107 9 683 5924 20 6 0 chrUextra 12951072 12951802 -16052854 + DOC2_DM LINE Jockey 915 1648 -3145 9 683 3356 170 11 7 chrUextra 12951905 12952638 -16052018 + SAR_DM Satellite Satellite 284 1019 -453 9 683 1576 0 0 0 chrUextra 12952738 12952917 -16051739 + LSU-rRNA_Dme rRNA rRNA 3722 3900 0 9 683 27 29 0 0 chrUextra 12952989 12953023 -16051633 + AT_rich Low_complexity Low_complexity 1 34 0 9 683 22 56 0 0 chrUextra 12953087 12953123 -16051533 + AT_rich Low_complexity Low_complexity 1 36 0 9 683 246 150 0 0 chrUextra 12953128 12953168 -16051488 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 683 246 150 0 0 chrUextra 12953220 12953260 -16051396 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 683 246 150 0 0 chrUextra 12953312 12953352 -16051304 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 683 255 125 0 0 chrUextra 12953395 12953435 -16051221 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 683 1046 8 8 0 chrUextra 12953572 12953698 -16050958 - MICROPIA_LTR LTR Gypsy -349 127 1 9 683 4913 10 0 3 chrUextra 12953698 12954295 -16050361 - MICROPIA_I LTR Gypsy 0 4476 3882 9 683 261 43 43 0 chrUextra 12954404 12954450 -16050206 - SAR_DM Satellite Satellite -1045 427 380 9 683 3755 33 54 3 chrUextra 12954459 12955137 -16049519 + DOC2_DM LINE Jockey 7 738 -4055 9 683 3485 43 0 222 chrUextra 12955253 12955970 -16048686 + BATUMI_I LTR Pao 4180 4737 -3226 9 683 6316 1 0 1 chrUextra 12956070 12956803 -16047853 - DOC LINE Jockey -169 4556 3825 9 683 1036 29 0 0 chrUextra 12956903 12957041 -16047615 - NTS_DM Other Other -65 175 38 9 683 870 9 0 27 chrUextra 12957041 12957153 -16047503 - NTS_DM Other Other -107 133 25 9 683 22 56 0 0 chrUextra 12957179 12957215 -16047441 + AT_rich Low_complexity Low_complexity 1 36 0 9 683 255 125 0 0 chrUextra 12957228 12957268 -16047388 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 683 246 150 0 0 chrUextra 12957311 12957351 -16047305 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 683 246 150 0 0 chrUextra 12957403 12957443 -16047213 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 683 246 150 0 0 chrUextra 12957495 12957535 -16047121 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 683 22 56 0 0 chrUextra 12957540 12957576 -16047080 + AT_rich Low_complexity Low_complexity 1 36 0 9 683 6221 9 15 0 chrUextra 12957736 12958469 -16046187 - Invader1_I LTR Gypsy -1506 1680 937 9 683 6091 4 0 0 chrUextra 12958582 12959302 -16045354 + DMRT1B LINE R1 885 1604 -3579 9 683 29 47 0 0 chrUextra 12959554 12959597 -16045059 + AT_rich Low_complexity Low_complexity 1 43 0 9 683 2225 15 4 11 chrUextra 12960235 12960512 -16044144 + BATUMI_I LTR Pao 6727 7001 -962 9 683 3592 14 0 5 chrUextra 12960538 12960968 -16043688 - BATUMI_I LTR Pao -1543 6420 5993 9 683 5137 2 0 0 chrUextra 12961068 12961652 -16043004 - SSU-rRNA_Dme rRNA rRNA -1411 584 1 9 683 410 0 20 0 chrUextra 12961749 12961799 -16042857 + (TA)n Simple_repeat Simple_repeat 1 51 0 9 683 6396 0 0 1 chrUextra 12961901 12962634 -16042022 + DOC LINE Jockey 3656 4387 -338 9 683 3597 48 15 0 chrUextra 12963567 12964042 -16040614 - TART LINE telomeric -11951 2526 2045 9 683 1869 60 79 0 chrUextra 12964033 12964300 -16040356 - TART LINE telomeric -12618 1859 1572 9 683 1427 46 5 0 chrUextra 12965237 12965434 -16039222 - ZAM_I LTR Gypsy -6493 997 800 9 683 2198 11 0 78 chrUextra 12965435 12965742 -16038914 + DM176_LTR LTR Gypsy 1 283 -224 9 683 1777 22 18 0 chrUextra 12965743 12965966 -16038690 + DM176_LTR LTR Gypsy 251 477 -30 9 683 6060 26 0 1 chrUextra 12966066 12966799 -16037857 + MAX_I LTR Pao 3893 4624 -3290 9 683 6327 3 1 0 chrUextra 12966902 12967632 -16037024 - LSU-rRNA_Dme rRNA rRNA -1268 2632 1902 9 683 3181 169 16 11 chrUextra 12967732 12968462 -16036194 - SAR_DM Satellite Satellite -515 957 224 9 683 1308 0 0 0 chrUextra 12968565 12968720 -16035936 + DM176_I LTR Gypsy 6266 6420 0 9 683 4289 4 0 2 chrUextra 12968720 12969228 -16035428 + DM176_LTR LTR Gypsy 1 507 0 9 683 572 0 0 0 chrUextra 12969230 12969298 -16035358 + ACCORD_LTR LTR Gypsy 432 499 -59 9 683 3814 2 0 0 chrUextra 12969398 12969845 -16034811 + FW_DM LINE Jockey 4246 4692 0 9 683 2279 11 0 0 chrUextra 12969859 12970131 -16034525 - R1_DM LINE R1 -311 5045 4774 9 683 21 95 0 0 chrUextra 12970327 12970390 -16034266 + AT_rich Low_complexity Low_complexity 1 63 0 9 683 4422 4 0 45 chrUextra 12970402 12970964 -16033692 + LSU-rRNA_Dme rRNA rRNA 1 537 -3363 9 683 1265 144 97 11 chrUextra 12971067 12971334 -16033322 - MDG1_LTR LTR Gypsy -64 378 89 9 683 1620 20 0 7 chrUextra 12971336 12971797 -16032859 + (TTA)n Simple_repeat Simple_repeat 1 458 0 9 683 6106 9 1 1 chrUextra 12971897 12972630 -16032026 + R1_DM LINE R1 3372 4104 -1252 9 683 319 361 16 37 chrUextra 12972823 12973225 -16031431 - Gypsy6_I LTR Gypsy -5228 1784 1344 9 683 284 26 26 0 chrUextra 12975229 12975267 -16029389 - NTS_DM Other Other -201 39 1 9 683 1704 21 17 21 chrUextra 12975267 12975508 -16029148 - NTS_DM Other Other 0 240 1 9 683 1756 17 17 17 chrUextra 12975508 12975748 -16028908 - NTS_DM Other Other 0 240 1 9 683 1515 19 19 19 chrUextra 12975748 12975962 -16028694 - NTS_DM Other Other 0 240 27 9 85 6097 0 3 0 chrUextra 12976062 12976795 -16027861 - TABOR_I LTR Gypsy -4835 1501 767 9 684 5995 29 1 0 chrUextra 12976895 12977628 -16027028 - R1_DM LINE R1 -3244 2112 1379 9 684 2483 43 17 150 chrUextra 12978561 12979022 -16025634 - Gypsy6_I LTR Gypsy -6612 400 1 9 684 1989 60 7 2 chrUextra 12979022 12979294 -16025362 - Gypsy6A_LTR LTR Gypsy 0 420 145 9 684 1176 0 0 0 chrUextra 12979556 12979691 -16024965 + 5S_DM RNA RNA 1 135 0 9 684 1157 15 0 0 chrUextra 12979922 12980057 -16024599 + 5S_DM RNA RNA 1 135 0 9 684 5515 31 1 1 chrUextra 12980227 12980960 -16023696 - IDEFIX_I LTR Gypsy -159 5469 4737 9 684 28 48 0 0 chrUextra 12981335 12981377 -16023279 + AT_rich Low_complexity Low_complexity 1 42 0 9 684 32 0 0 0 chrUextra 12981705 12981737 -16022919 + AT_rich Low_complexity Low_complexity 1 32 0 9 684 6104 11 0 0 chrUextra 12981893 12982626 -16022030 + STALKER4_I LTR Gypsy 3247 3979 -2551 9 684 908 60 3 17 chrUextra 12982726 12983459 -16021197 + RSP Satellite Satellite 1 722 0 9 684 23 68 0 0 chrUextra 12983579 12983623 -16021033 + AT_rich Low_complexity Low_complexity 1 44 0 9 684 1759 33 0 0 chrUextra 12984079 12984292 -16020364 - PROTOP DNA P 0 4480 4268 9 684 3066 185 16 21 chrUextra 12984396 12985121 -16019535 + SAR_DM Satellite Satellite 1 721 -208 9 684 5015 16 2 2 chrUextra 12986058 12986669 -16017987 - R1_DM LINE R1 -1448 3908 3298 9 684 972 32 0 0 chrUextra 12986667 12986791 -16017865 - R1_DM LINE R1 -2425 2931 2808 9 684 6067 15 1 1 chrUextra 12986893 12987624 -16017032 - R1_DM LINE R1 -1485 3871 3141 9 684 3017 177 15 23 chrUextra 12987724 12988457 -16016199 + SAR_DM Satellite Satellite 427 1153 -319 9 684 28 48 0 0 chrUextra 12988898 12988940 -16015716 + AT_rich Low_complexity Low_complexity 1 42 0 9 684 5964 20 9 1 chrUextra 12989390 12990123 -16014533 + FW_DM LINE Jockey 2377 3115 -1577 9 684 2150 0 0 0 chrUextra 12990223 12990467 -16014189 - R2_DM LINE R2 -1443 2164 1921 9 684 389 61 0 0 chrUextra 12990464 12990513 -16014143 - LSU-rRNA_Dme rRNA rRNA -1274 2626 2578 9 684 3867 0 0 2 chrUextra 12990511 12990956 -16013700 - R2_DM LINE R2 0 3607 3164 9 684 6257 8 0 0 chrUextra 12991056 12991789 -16012867 - R1_DM LINE R1 -39 5317 4585 9 684 2993 172 29 15 chrUextra 12991892 12992619 -16012037 - SAR_DM Satellite Satellite -512 960 224 9 684 233 238 49 10 chrUextra 12992765 12992867 -16011789 - MDG1_I LTR Gypsy -4743 1853 1748 9 684 5879 4 0 45 chrUextra 12993555 12994288 -16010368 + MICROPIA_I LTR Gypsy 1315 2014 -2462 9 684 6095 1 1 1 chrUextra 12995251 12995954 -16008702 - SSU-rRNA_Dme rRNA rRNA 0 1995 1293 9 684 445 183 11 0 chrUextra 12996307 12996400 -16008256 + Gypsy12A_LTR LTR Gypsy 2 95 -2185 9 684 590 24 146 0 chrUextra 12996401 12996483 -16008173 + PROTOP_B DNA P 1 94 -1059 9 684 2196 46 7 13 chrUextra 12996479 12996787 -16007869 + PROTOP_B DNA P 224 529 -624 9 684 6049 7 22 0 chrUextra 12996887 12997620 -16007036 + Invader2_I LTR Gypsy 294 1042 -3550 9 684 470 294 60 53 chrUextra 12997732 12998278 -16006378 - SAR_DM Satellite Satellite -694 778 229 9 684 6166 1 0 0 chrUextra 12998553 12999286 -16005370 - Invader2_I LTR Gypsy -1880 2712 1980 9 684 34 24 0 0 chrUextra 13000007 13000048 -16004608 + AT_rich Low_complexity Low_complexity 1 41 0 9 684 326 86 671 15 chrUextra 13000219 13000349 -16004307 + HMSBEAGLE_I LTR Gypsy 3 221 -6308 9 684 6253 1 1 0 chrUextra 13001052 13001785 -16002871 + ROO_I LTR Pao 1220 1953 -6303 9 684 3301 167 8 8 chrUextra 13001901 13002609 -16002047 - SAR_DM Satellite Satellite -396 1076 369 9 684 21 57 0 0 chrUextra 13002769 13002804 -16001852 + AT_rich Low_complexity Low_complexity 1 35 0 9 684 1545 37 0 0 chrUextra 13003260 13003451 -16001205 - PROTOP DNA P 0 4480 4290 9 684 2941 6 8 8 chrUextra 13003551 13003917 -16000739 + DM297_LTR LTR Gypsy 49 414 0 9 684 2666 16 5 3 chrUextra 13003917 13004284 -16000372 + DM297_I LTR Gypsy 1 368 -5799 9 684 2726 190 12 20 chrUextra 13004384 13005117 -15999539 - SAR_DM Satellite Satellite -638 727 1 9 684 2957 203 13 18 chrUextra 13006054 13006783 -15997873 - SAR_DM Satellite Satellite -593 724 1 9 684 5095 0 2 0 chrUextra 13006883 13007464 -15997192 + LSU-rRNA_Dme rRNA rRNA 3319 3900 0 9 684 27 29 0 0 chrUextra 13007536 13007570 -15997086 + AT_rich Low_complexity Low_complexity 1 34 0 9 684 868 309 31 28 chrUextra 13007716 13008424 -15996232 - SAR_DM Satellite Satellite -428 1044 335 9 684 6277 0 4 3 chrUextra 13008549 13009282 -15995374 + SSU-rRNA_Dme rRNA rRNA 758 1491 -504 9 684 6276 9 0 0 chrUextra 13009382 13010115 -15994541 + DOC2_DM LINE Jockey 3538 4270 -523 9 684 2939 179 19 26 chrUextra 13010218 13010948 -15993708 + SAR_DM Satellite Satellite 1 725 -208 9 684 4725 21 0 0 chrUextra 13011050 13011623 -15993033 - PROTOP DNA P -3909 571 1 9 684 1266 13 0 0 chrUextra 13011623 13011780 -15992876 - QUASIMODO_I LTR Gypsy -4488 1572 1416 9 684 925 16 8 0 chrUextra 13012714 13012837 -15991819 + Copia2_I LTR Copia 4039 4162 0 9 684 1699 0 0 0 chrUextra 13012837 13013035 -15991621 + Copia2_LTR_DM LTR Copia 1 198 0 9 684 983 68 34 0 chrUextra 13013035 13013182 -15991474 + QUASIMODO_I LTR Gypsy 5024 5175 -885 9 684 1688 30 0 0 chrUextra 13013193 13013428 -15991228 + QUASIMODO_I LTR Gypsy 5493 5727 -333 9 684 3097 177 16 10 chrUextra 13013547 13014276 -15990380 - SAR_DM Satellite Satellite -515 957 224 9 684 5393 0 0 0 chrUextra 13014380 13015020 -15989636 - HMSBEAGLE_I LTR Gypsy -5889 640 1 9 684 783 11 0 0 chrUextra 13015019 13015113 -15989543 - DMLTR5 LTR Gypsy 0 266 173 9 684 6361 0 0 0 chrUextra 13015213 13015946 -15988710 + DMRT1B LINE R1 3502 4234 -949 9 684 3196 176 8 10 chrUextra 13016879 13017609 -15987047 + SAR_DM Satellite Satellite 195 923 -549 9 684 3057 0 0 0 chrUextra 13017712 13018058 -15986598 - ROO_LTR LTR Pao -82 346 1 9 684 2225 0 4 0 chrUextra 13018545 13018803 -15985853 + Gypsy12_I LTR Gypsy 5288 5546 0 9 684 4184 0 0 0 chrUextra 13018803 13019277 -15985379 + Gypsy12_LTR LTR Gypsy 1 474 -1862 9 684 2898 200 14 20 chrUextra 13019377 13020109 -15984547 - SAR_DM Satellite Satellite -602 727 1 9 684 2025 0 0 0 chrUextra 13020463 13020703 -15983953 - ALUII_DM Unknown Unknown 0 240 1 9 684 21 57 0 0 chrUextra 13020703 13020738 -15983918 + AT_rich Low_complexity Low_complexity 1 35 0 9 684 3143 180 6 8 chrUextra 13021049 13021760 -15982896 - SAR_DM Satellite Satellite -569 903 195 9 684 612 123 0 0 chrUextra 13021667 13021773 -15982883 + ARS406_DM Unknown Unknown 1 106 -247 9 684 585 0 0 0 chrUextra 13021873 13021940 -15982716 + LSU-rRNA_Dme rRNA rRNA 3834 3900 0 9 684 22 56 0 0 chrUextra 13022012 13022048 -15982608 + AT_rich Low_complexity Low_complexity 1 36 0 9 684 246 150 0 0 chrUextra 13022053 13022093 -15982563 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 684 246 150 0 0 chrUextra 13022145 13022185 -15982471 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 684 246 150 0 0 chrUextra 13022237 13022277 -15982379 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 684 255 125 0 0 chrUextra 13022320 13022360 -15982296 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 684 22 56 0 0 chrUextra 13022373 13022409 -15982247 + AT_rich Low_complexity Low_complexity 1 36 0 9 684 840 9 0 35 chrUextra 13022435 13022548 -15982108 + NTS_DM Other Other 25 133 -107 9 684 455 0 0 18 chrUextra 13022548 13022605 -15982051 + NTS_DM Other Other 38 93 -147 9 684 3016 169 30 21 chrUextra 13022711 13023437 -15981219 + SAR_DM Satellite Satellite 191 923 -549 9 684 22 35 0 0 chrUextra 13023640 13023669 -15980987 + AT_rich Low_complexity Low_complexity 1 29 0 9 684 21 57 0 0 chrUextra 13023866 13023901 -15980755 + AT_rich Low_complexity Low_complexity 1 35 0 9 684 1985 8 0 0 chrUextra 13023901 13024141 -15980515 + ALUII_DM Unknown Unknown 1 240 0 9 684 25 75 0 0 chrUextra 13024184 13024237 -15980419 + AT_rich Low_complexity Low_complexity 1 53 0 9 684 2800 87 0 2 chrUextra 13024476 13024879 -15979777 + Jockey2 LINE Jockey 1419 1820 -1608 9 684 498 53 620 2 chrUextra 13024887 13025098 -15979558 - PROTOP_B DNA P -297 856 472 9 684 4309 25 96 15 chrUextra 13025201 13025931 -15978725 - ACCORD2_I LTR Gypsy -4861 2351 1563 9 684 6143 0 3 3 chrUextra 13026033 13026765 -15977891 + ROO_I LTR Pao 1793 2524 -5732 9 684 1218 164 4 0 chrUextra 13026865 13027127 -15977529 - ROVER-I_DM LTR Gypsy -332 6252 5990 9 684 2314 161 5 0 chrUextra 13027162 13027597 -15977059 - ROVER-I_DM LTR Gypsy -1276 5308 4872 9 684 6118 1 0 1 chrUextra 13027697 13028429 -15976227 + ROO_I LTR Pao 2810 3540 -4716 9 684 6217 4 0 0 chrUextra 13028529 13029261 -15975395 - ROVER-I_DM LTR Gypsy -2217 4367 3636 9 684 6136 6 0 0 chrUextra 13029361 13030092 -15974564 - QUASIMODO_I LTR Gypsy -2534 3526 2796 9 684 22 0 0 0 chrUextra 13030414 13030436 -15974220 + AT_rich Low_complexity Low_complexity 1 22 0 9 684 291 232 0 0 chrUextra 13030708 13030777 -15973879 + BS2 LINE Jockey 4146 4214 -507 9 684 3051 8 0 0 chrUextra 13031025 13031416 -15973240 + QUASIMODO_I LTR Gypsy 5670 6060 0 9 684 2823 0 6 0 chrUextra 13031416 13031757 -15972899 + QUASIMODO_LTR LTR Gypsy 1 343 -315 9 684 4929 70 3 0 chrUextra 13031858 13032583 -15972073 + I_DM LINE I 4662 5388 -843 9 684 28 48 0 0 chrUextra 13032911 13032953 -15971703 + AT_rich Low_complexity Low_complexity 1 42 0 9 684 32 0 0 0 chrUextra 13033282 13033314 -15971342 + AT_rich Low_complexity Low_complexity 1 32 0 9 684 6278 4 0 0 chrUextra 13034353 13035085 -15969571 - R1_DM LINE R1 -3331 2025 1294 9 684 1028 85 80 0 chrUextra 13035195 13035371 -15969285 - TART_B1 LINE telomeric -8156 2498 2309 9 684 3570 5 0 0 chrUextra 13035406 13035817 -15968839 - DMRT1B LINE R1 0 5183 4773 9 684 466 146 0 0 chrUextra 13035812 13035915 -15968741 - TART_B1 LINE telomeric -8863 1791 1689 9 684 5558 13 45 37 chrUextra 13036017 13036749 -15967907 - CIRCE LINE Composite -5402 954 217 9 684 5896 20 0 0 chrUextra 13036851 13037581 -15967075 + STALKER4_I LTR Gypsy 3175 3904 -2626 9 684 4020 86 21 3 chrUextra 13037685 13038335 -15966321 - FW_DM LINE Jockey -962 3730 2544 9 684 658 13 0 0 chrUextra 13038335 13038413 -15966243 + STALKER4_LTR LTR Gypsy 1 78 -324 9 684 4592 21 77 0 chrUextra 13038513 13039245 -15965411 - R1_DM LINE R1 -88 5268 4481 9 684 4317 21 0 0 chrUextra 13039345 13039866 -15964790 - R1_DM LINE R1 -1561 3795 3275 9 684 1658 24 0 5 chrUextra 13039869 13040077 -15964579 - R1_DM LINE R1 -2214 3142 2936 9 684 6191 10 6 0 chrUextra 13040177 13040909 -15963747 + IVK_DM LINE I 3598 4333 -1069 9 684 6298 1 0 0 chrUextra 13041009 13041725 -15962931 - SSU-rRNA_Dme rRNA rRNA -1279 716 1 9 684 3766 0 0 0 chrUextra 13041872 13042300 -15962356 - ROO_LTR LTR Pao 0 428 1 9 684 2206 0 4 0 chrUextra 13042300 13042573 -15962083 - ROO_I LTR Pao 0 8256 7983 9 684 1908 209 36 57 chrUextra 13042676 13043225 -15961431 - Gypsy12_LTR LTR Gypsy -1786 550 13 9 684 931 88 117 12 chrUextra 13043243 13043405 -15961251 - Gypsy12_I LTR Gypsy -5 5541 5363 9 684 6144 14 1 0 chrUextra 13043505 13044237 -15960419 + Copia2_I LTR Copia 982 1714 -2448 9 684 6241 1 0 0 chrUextra 13044337 13045069 -15959587 + DM297_I LTR Gypsy 292 1023 -5144 9 684 5306 0 0 39 chrUextra 13045230 13045901 -15958755 + LSU-rRNA_Dme rRNA rRNA 1 645 -3255 9 684 2602 85 22 16 chrUextra 13046002 13046730 -15957926 + DMSAT6 Satellite Satellite 1 732 -97 9 684 6062 20 0 0 chrUextra 13046833 13047565 -15957091 + ROO_I LTR Pao 2312 3043 -5213 9 684 4063 28 79 1 chrUextra 13047665 13048397 -15956259 + R1_DM LINE R1 4150 4938 -418 9 684 5324 5 3 0 chrUextra 13048497 13049101 -15955555 + SSU-rRNA_Dme rRNA rRNA 89 694 -1301 9 684 1062 8 8 0 chrUextra 13049101 13049229 -15955427 + TRANSPAC_LTR LTR Gypsy 1 129 -201 9 684 2343 17 8 6 chrUextra 13049329 13049684 -15954972 + Stalker2_I LTR Gypsy 7047 7402 0 9 684 2765 3 0 3 chrUextra 13049684 13050010 -15954646 + Stalker2_LTR LTR Gypsy 100 424 0 9 684 201 0 122 0 chrUextra 13050012 13050061 -15954595 + (GA)n Simple_repeat Simple_repeat 2 56 0 9 684 5972 26 4 0 chrUextra 13050161 13050893 -15953763 - R1_DM LINE R1 -1686 3670 2936 9 684 5831 19 4 8 chrUextra 13050993 13051725 -15952931 - R1_DM LINE R1 -1382 3974 3246 9 684 4367 85 109 11 chrUextra 13051825 13052557 -15952099 + Gypsy12_I LTR Gypsy 4424 5227 -319 9 684 2264 26 0 0 chrUextra 13052657 13052930 -15951726 - CIRCE LINE Composite -6083 273 1 9 684 3707 33 17 0 chrUextra 13052930 13053389 -15951267 - CIRCE LINE Composite 0 6356 5890 9 684 5108 1 25 34 chrUextra 13053492 13054221 -15950435 + ROVER-I_DM LTR Gypsy 225 946 -5638 9 684 6248 10 0 4 chrUextra 13054321 13055053 -15949603 - BATUMI_I LTR Pao -2097 5866 5138 9 684 2069 175 11 7 chrUextra 13055153 13055883 -15948773 + SAR_DM Satellite Satellite 1 732 -656 9 684 3386 192 11 25 chrUextra 13055985 13056712 -15947944 - SAR_DM Satellite Satellite -542 717 1 9 684 321 232 0 0 chrUextra 13057014 13057083 -15947573 - BS2 LINE Jockey -507 4214 4146 9 684 22 0 0 0 chrUextra 13057357 13057379 -15947277 + AT_rich Low_complexity Low_complexity 1 22 0 9 684 6702 3 1 3 chrUextra 13057649 13058381 -15946275 - SSU-rRNA_Dme rRNA rRNA -671 1324 594 9 684 1004 157 22 82 chrUextra 13058481 13058715 -15945941 - HETA LINE telomeric -1819 4262 4075 9 684 745 11 0 22 chrUextra 13058668 13058758 -15945898 + TRANSIB2 DNA Transib 2757 2844 0 9 684 1120 16 0 0 chrUextra 13058827 13058950 -15945706 - ROVER-I_DM LTR Gypsy -6461 123 1 9 684 2170 12 8 34 chrUextra 13058950 13059213 -15945443 - ROVER-LTR_DM LTR Gypsy 0 367 112 9 684 6165 34 8 0 chrUextra 13059314 13060045 -15944611 + R1_DM LINE R1 2195 2931 -2425 9 684 1906 180 24 23 chrUextra 13060145 13060875 -15943781 - SAR_DM Satellite Satellite -504 731 1 9 684 27 29 0 0 chrUextra 13062078 13062112 -15942544 + AT_rich Low_complexity Low_complexity 1 34 0 9 684 265 91 0 0 chrUextra 13062351 13062384 -15942272 + Baggins1 LINE LOA 4727 4759 -694 9 684 769 103 241 0 chrUextra 13062389 13062534 -15942122 + FB4_DM DNA Tc1 3908 4087 -2 9 684 6248 23 12 0 chrUextra 13062641 13063373 -15941283 - R1_DM LINE R1 -1789 3567 2827 9 684 3509 5 8 2 chrUextra 13063473 13063871 -15940785 + LSU-rRNA_Dme rRNA rRNA 1392 1791 -2109 9 684 2706 0 3 0 chrUextra 13063912 13064203 -15940453 + LSU-rRNA_Dme rRNA rRNA 1788 2079 -1821 9 684 6576 14 0 0 chrUextra 13064305 13065037 -15939619 - Copia2_I LTR Copia -2198 1964 1233 9 684 5680 49 87 0 chrUextra 13065137 13065869 -15938787 + Baggins1 LINE LOA 4475 5270 -183 9 684 5594 3 0 0 chrUextra 13065969 13066577 -15938079 + QUASIMODO_LTR LTR Gypsy 51 658 0 9 684 247 28 0 100 chrUextra 13066590 13066630 -15938026 - DNAREP1_DM LINE Penelope -135 459 424 9 684 1050 330 35 36 chrUextra 13066815 13067513 -15937143 - Copia2_I LTR Copia -2013 2149 1386 9 684 6631 16 0 0 chrUextra 13067633 13068365 -15936291 + Invader1_I LTR Gypsy 474 1205 -1981 9 684 6412 19 0 18 chrUextra 13069297 13070029 -15934627 + Gypsy6_I LTR Gypsy 5027 5745 -1267 9 684 6407 8 1 0 chrUextra 13070129 13070861 -15933795 - G6_DM LINE Jockey -1224 818 86 9 684 6649 3 1 0 chrUextra 13070961 13071693 -15932963 - R1_DM LINE R1 -1610 3746 3014 9 684 2711 87 8 23 chrUextra 13071793 13072525 -15932131 - DMSAT6 Satellite Satellite -35 721 1 9 684 6530 3 0 0 chrUextra 13072625 13073347 -15931309 - LSU-rRNA_Dme rRNA rRNA -2961 939 218 9 684 6258 0 1 34 chrUextra 13073457 13074189 -15930467 + LSU-rRNA_Dme rRNA rRNA 10 717 -3183 9 684 593 148 38 58 chrUextra 13074289 13074589 -15930067 + QUASIMODO_LTR LTR Gypsy 180 643 -15 9 684 532 250 20 20 chrUextra 13074824 13075020 -15929636 + TV1I LTR Gypsy 712 907 -5056 9 684 6701 8 0 1 chrUextra 13075121 13075853 -15928803 + Gypsy4_I LTR Gypsy 779 1509 -4779 9 684 638 130 9 0 chrUextra 13075954 13076062 -15928594 - SAR_DM Satellite Satellite -825 647 539 9 684 1050 179 32 19 chrUextra 13076073 13076685 -15927971 - SAR_DM Satellite Satellite -683 619 1 9 684 494 34 0 0 chrUextra 13076936 13076995 -15927661 + DM176_LTR LTR Gypsy 225 283 -224 9 684 2171 30 15 4 chrUextra 13076979 13077249 -15927407 + DM176_LTR LTR Gypsy 179 507 0 9 684 698 158 79 94 chrUextra 13077252 13077517 -15927139 - MAX_I LTR Pao -7390 524 264 9 684 3475 186 14 8 chrUextra 13077617 13078349 -15926307 + SAR_DM Satellite Satellite 267 1002 -470 9 684 3464 170 14 19 chrUextra 13078449 13079174 -15925482 - SAR_DM Satellite Satellite -572 900 180 9 684 4298 34 49 153 chrUextra 13079281 13080013 -15924643 + CIRCE LINE Composite 1012 1667 -4689 9 684 5460 72 0 1 chrUextra 13080113 13080845 -15923811 - I_DM LINE I -1495 4736 4006 9 684 6696 1 0 1 chrUextra 13080945 13081677 -15922979 - ROO_I LTR Pao -6558 1698 968 9 684 5332 105 0 0 chrUextra 13081778 13082509 -15922147 + HETA LINE telomeric 2312 3042 -3039 9 684 6590 4 0 0 chrUextra 13082609 13083341 -15921315 - FW_DM LINE Jockey -1363 3329 2598 9 684 1350 160 89 81 chrUextra 13083444 13083809 -15920847 + Gypsy12_LTR LTR Gypsy 1220 1597 -683 9 684 207 0 0 0 chrUextra 13083809 13083832 -15920824 + (TAA)n Simple_repeat Simple_repeat 3 25 0 9 684 497 206 144 65 chrUextra 13083832 13083918 -15920738 + Gypsy12_LTR LTR Gypsy 1598 1678 -602 9 684 1925 69 23 0 chrUextra 13083911 13084173 -15920483 - IVK_DM LINE I -2 5400 5133 9 684 5736 26 23 8 chrUextra 13084273 13085005 -15919651 - PROTOP DNA P -3504 976 234 9 684 6587 0 0 1 chrUextra 13085105 13085837 -15918819 + ROO_I LTR Pao 2930 3660 -4596 9 684 6057 1 0 1 chrUextra 13085937 13086619 -15918037 + STALKER4_I LTR Gypsy 2940 3620 -2910 9 684 484 33 17 0 chrUextra 13086606 13086666 -15917990 + STALKER4_I LTR Gypsy 4662 4722 -1808 9 684 6306 30 3 3 chrUextra 13086769 13087501 -15917155 - DMCR1A LINE CR1 -2363 2107 1376 9 684 3393 168 30 21 chrUextra 13087604 13088333 -15916323 - SAR_DM Satellite Satellite -361 1111 376 9 684 6438 27 1 1 chrUextra 13088433 13089165 -15915491 + DIVER_I LTR Pao 1857 2588 -3055 9 684 3086 46 65 36 chrUextra 13089265 13089741 -15914915 + PROTOP_B DNA P 447 936 -217 9 684 313 50 0 0 chrUextra 13089734 13089794 -15914862 + PROTOP_B DNA P 572 631 -522 9 684 1417 57 15 25 chrUextra 13089799 13089997 -15914659 + PROTOP_B DNA P 794 989 -164 9 684 3182 6 0 3 chrUextra 13090100 13090449 -15914207 - T412LTR LTR LTR -133 348 1 9 684 4277 2 0 0 chrUextra 13090339 13090829 -15913827 - DM412 LTR Gypsy 0 6897 6408 9 684 6173 37 0 1 chrUextra 13090933 13091661 -15912995 + DIVER_I LTR Pao 3488 4214 -1429 9 684 2557 7 3 0 chrUextra 13091761 13092044 -15912612 + DIVER_I LTR Pao 848 1131 -4512 9 684 4061 7 0 0 chrUextra 13092049 13092493 -15912163 + R2_DM LINE R2 2676 3119 -488 9 684 6578 1 1 1 chrUextra 13092593 13093325 -15911331 - R1_DM LINE R1 -3811 1545 814 9 684 6123 28 4 10 chrUextra 13093426 13094157 -15910499 - BATUMI_I LTR Pao -5424 2539 1813 9 684 2425 93 45 44 chrUextra 13094257 13094989 -15909667 - DMSAT6 Satellite Satellite -29 733 1 9 684 6635 3 0 1 chrUextra 13095089 13095821 -15908835 + STALKER4_I LTR Gypsy 3316 4046 -2484 9 684 1508 16 99 0 chrUextra 13095921 13096103 -15908553 - PROTOP DNA P -4280 200 1 9 684 3594 162 13 10 chrUextra 13096776 13097482 -15907174 - SAR_DM Satellite Satellite -396 1076 369 9 684 2118 13 0 0 chrUextra 13097585 13097820 -15906836 - DM176_I LTR Gypsy -1194 5226 4992 9 684 4119 18 12 20 chrUextra 13097811 13098312 -15906344 - DM176_I LTR Gypsy -5453 967 471 9 684 980 21 28 28 chrUextra 13098417 13098562 -15906094 + NTS_DM Other Other 96 240 0 9 684 1887 21 17 17 chrUextra 13098562 13098802 -15905854 + NTS_DM Other Other 1 240 0 9 684 1899 17 17 17 chrUextra 13098802 13099042 -15905614 + NTS_DM Other Other 1 240 0 9 684 950 9 9 0 chrUextra 13099042 13099149 -15905507 + NTS_DM Other Other 1 108 -132 9 684 537 250 43 32 chrUextra 13099250 13099436 -15905220 + MICROPIA_I LTR Gypsy 3130 3317 -1159 9 684 416 307 0 0 chrUextra 13099483 13099610 -15905046 + MICROPIA_I LTR Gypsy 3668 3794 -682 9 684 373 299 101 9 chrUextra 13099696 13099909 -15904747 + MICROPIA_I LTR Gypsy 3434 3850 -626 9 684 2726 90 20 8 chrUextra 13100081 13100813 -15903843 - DMSAT6 Satellite Satellite -8 740 1 9 684 3224 188 31 23 chrUextra 13100913 13101645 -15903011 + SAR_DM Satellite Satellite 1 737 -202 9 684 405 184 248 0 chrUextra 13101746 13101855 -15902801 - HMSBEAGLE_I LTR Gypsy -607 5922 5787 9 684 2088 111 25 0 chrUextra 13101857 13102172 -15902484 - HMSBEAGLE_I LTR Gypsy -901 5628 5306 9 684 2016 113 20 0 chrUextra 13102185 13102477 -15902179 - HMSBEAGLE_I LTR Gypsy -3356 3173 2876 9 684 3581 21 100 6 chrUextra 13102577 13103309 -15901347 - R1_DM LINE R1 -1259 4097 3297 9 684 4741 13 0 0 chrUextra 13103409 13103942 -15900714 + G2_DM LINE Jockey 2564 3096 -6 9 684 1366 42 19 116 chrUextra 13103926 13104141 -15900515 + LSU-rRNA_Dme rRNA rRNA 103 296 -3604 9 684 709 0 0 0 chrUextra 13104241 13104318 -15900338 - NTS_DM Other Other -126 114 38 9 684 848 18 0 44 chrUextra 13104318 13104432 -15900224 - NTS_DM Other Other -107 133 25 9 684 1350 18 0 6 chrUextra 13104484 13104649 -15900007 - NTS_DM Other Other -39 201 38 9 684 936 9 0 27 chrUextra 13104649 13104761 -15899895 - NTS_DM Other Other -107 133 25 9 684 22 56 0 0 chrUextra 13104787 13104823 -15899833 + AT_rich Low_complexity Low_complexity 1 36 0 9 684 278 176 0 19 chrUextra 13104836 13104888 -15899768 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 684 268 196 0 19 chrUextra 13104919 13104971 -15899685 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 684 2912 221 8 8 chrUextra 13105085 13105805 -15898851 - DM297_I LTR Gypsy -1433 4734 4015 9 684 6122 29 0 12 chrUextra 13105905 13106637 -15898019 + R1_DM LINE R1 2579 3301 -2055 9 85 6697 1 0 1 chrUextra 13106737 13107469 -15897187 + DOC LINE Jockey 1990 2720 -2005 9 685 6745 1 0 0 chrUextra 13107569 13108301 -15896355 - ROO_I LTR Pao -2640 5616 4885 9 685 2322 171 156 56 chrUextra 13109261 13109955 -15894701 - Gypsy12_LTR LTR Gypsy -68 2268 1506 9 685 6371 1 0 3 chrUextra 13110065 13110797 -15893859 - DM412 LTR Gypsy -100 6797 6068 9 685 5833 44 41 7 chrUextra 13110897 13111629 -15893027 - R1_DM LINE R1 -3668 1688 932 9 685 183 129 0 0 chrUextra 13111890 13111921 -15892735 + (TC)n Simple_repeat Simple_repeat 1 31 0 9 685 6134 12 16 0 chrUextra 13112561 13113293 -15891363 + Invader2_I LTR Gypsy 49 792 -3800 9 685 4851 55 67 15 chrUextra 13113393 13114108 -15890548 - QUASIMODO_I LTR Gypsy -1063 4997 4246 9 685 749 9 36 27 chrUextra 13114225 13114335 -15890321 + NTS_DM Other Other 130 240 0 9 685 1269 13 0 7 chrUextra 13114335 13114487 -15890169 + NTS_DM Other Other 1 151 -89 9 685 546 13 0 13 chrUextra 13114482 13114560 -15890096 + NTS_DM Other Other 75 151 -89 9 685 615 11 0 33 chrUextra 13114555 13114646 -15890010 + NTS_DM Other Other 75 162 -78 9 685 514 119 36 0 chrUextra 13114741 13114825 -15889831 + NTS_DM Other Other 4 90 -150 9 685 1381 7 0 0 chrUextra 13115889 13116041 -15888615 - ROO_I LTR Pao -8104 152 1 9 685 3901 0 0 2 chrUextra 13116041 13116470 -15888186 - ROO_LTR LTR Pao 0 428 1 9 685 558 121 33 73 chrUextra 13116470 13116621 -15888035 + HETA LINE telomeric 5045 5189 -892 9 685 5866 6 1 0 chrUextra 13116721 13117453 -15887203 + QUASIMODO_I LTR Gypsy 5159 5891 -169 9 685 2503 165 18 8 chrUextra 13117553 13118285 -15886371 + SAR_DM Satellite Satellite 1 739 -416 9 685 5255 45 35 0 chrUextra 13118385 13119066 -15885590 - TART LINE telomeric -11728 2749 2045 9 685 440 100 0 0 chrUextra 13119057 13119117 -15885539 - TART_B1 LINE telomeric -4317 6337 6278 9 685 6017 20 1 1 chrUextra 13119217 13119949 -15884707 + PROTOP_A DNA P 91 822 -283 9 685 3490 163 23 11 chrUextra 13120049 13120781 -15883875 + SAR_DM Satellite Satellite 332 1072 -400 9 685 3288 187 4 15 chrUextra 13120881 13121613 -15883043 + SAR_DM Satellite Satellite 376 1099 -373 9 685 639 14 0 0 chrUextra 13121713 13121785 -15882871 - CIRCE LINE Composite -3250 3106 3035 9 685 3593 63 4 24 chrUextra 13121786 13122445 -15882211 - CIRCE LINE Composite -3442 2914 2219 9 685 6563 4 0 0 chrUextra 13122546 13123277 -15881379 - BARI_DM DNA Tc1 -873 855 125 9 685 6595 7 0 0 chrUextra 13123377 13124109 -15880547 - R1_DM LINE R1 -607 4749 4018 9 685 1029 8 0 0 chrUextra 13124209 13124329 -15880327 + DM1731_I LTR Copia 3857 3976 0 9 685 2750 39 0 0 chrUextra 13124329 13124661 -15879995 + DM1731_LTR LTR Copia 1 332 -4 9 685 483 18 0 0 chrUextra 13124661 13124717 -15879939 + (TATAA)n Simple_repeat Simple_repeat 4 59 0 9 685 1620 0 0 0 chrUextra 13124735 13124941 -15879715 + (TATAA)n Simple_repeat Simple_repeat 1 206 0 9 685 2793 40 10 11 chrUextra 13125041 13125738 -15878918 - PROTOP DNA P -3225 1255 489 9 685 6254 10 0 12 chrUextra 13125873 13126605 -15878051 - R1_DM LINE R1 -4436 920 198 9 685 792 37 0 115 chrUextra 13126858 13126980 -15877676 + Baggins1 LINE LOA 5346 5453 0 9 685 6403 0 3 1 chrUextra 13127540 13128269 -15876387 - STALKER4_I LTR Gypsy -5212 1318 589 9 685 514 206 9 9 chrUextra 13128369 13128477 -15876179 + TAHRE LINE telomeric 9975 10082 -381 9 685 3879 21 174 2 chrUextra 13128473 13129101 -15875555 + DMRT1B LINE R1 199 934 -4249 9 685 6323 18 0 6 chrUextra 13129201 13129933 -15874723 - FW_DM LINE Jockey -49 4643 3916 9 685 6191 1 1 1 chrUextra 13130037 13130764 -15873892 - QUASIMODO_I LTR Gypsy -1493 4567 3841 9 685 1846 0 0 0 chrUextra 13130864 13131068 -15873588 - BARI_DM DNA Tc1 -1431 297 94 9 685 4709 13 0 0 chrUextra 13131056 13131595 -15873061 - BARI_DM DNA Tc1 -239 1489 951 9 685 5212 104 1 4 chrUextra 13131695 13132426 -15872230 + Gypsy12_I LTR Gypsy 1835 2563 -2983 9 685 5822 36 64 3 chrUextra 13132526 13133257 -15871399 + NINJA_I LTR Pao 4221 4996 -1015 9 685 6548 1 0 0 chrUextra 13133359 13134088 -15870568 + ROO_I LTR Pao 1011 1739 -6517 9 685 3216 181 23 10 chrUextra 13134188 13134917 -15869739 - SAR_DM Satellite Satellite -504 968 230 9 685 6516 1 1 6 chrUextra 13135019 13135750 -15868906 - SSU-rRNA_Dme rRNA rRNA -256 1739 1012 9 685 387 113 0 0 chrUextra 13135850 13135912 -15868744 + (CTG)n Simple_repeat Simple_repeat 1 62 0 9 685 5194 5 30 20 chrUextra 13135912 13136546 -15868110 - ROO_I LTR Pao -7616 640 1 9 685 287 29 0 0 chrUextra 13136546 13136581 -15868075 - ROO_LTR LTR Pao 0 428 394 9 685 347 202 0 21 chrUextra 13136681 13136777 -15867879 + XDMR_DM Unknown Unknown 267 360 0 9 685 3135 176 11 22 chrUextra 13136691 13137412 -15867244 - SAR_DM Satellite Satellite -354 1118 406 9 685 6291 16 36 0 chrUextra 13137512 13138243 -15866413 + R1_DM LINE R1 1782 2538 -2818 9 685 6297 21 12 0 chrUextra 13138343 13139070 -15865586 - CIRCE LINE Composite -193 6163 5428 9 685 23 0 0 0 chrUextra 13139186 13139209 -15865447 + AT_rich Low_complexity Low_complexity 1 23 0 9 685 356 167 42 92 chrUextra 13139443 13139562 -15865094 + Copia_I LTR Copia 4401 4513 -80 9 685 1535 0 0 15 chrUextra 13140005 13140266 -15864390 + (TTATA)n Simple_repeat Simple_repeat 1 257 0 9 685 2896 6 0 0 chrUextra 13140271 13140592 -15864064 - MAX_LTR LTR Pao 0 321 1 9 685 1292 0 0 0 chrUextra 13140592 13140736 -15863920 - MAX_I LTR Pao 0 7914 7771 9 685 3498 38 0 7 chrUextra 13140840 13141263 -15863393 - G2_DM LINE Jockey -1272 1830 1411 9 685 22 56 0 0 chrUextra 13141412 13141448 -15863208 + AT_rich Low_complexity Low_complexity 1 36 0 9 685 6337 15 19 1 chrUextra 13141667 13142398 -15862258 + ACCORD2_I LTR Gypsy 52 795 -6417 9 685 6243 18 22 0 chrUextra 13142498 13143229 -15861427 + FW_DM LINE Jockey 1198 1944 -2748 9 685 3190 175 18 21 chrUextra 13143333 13144058 -15860598 + SAR_DM Satellite Satellite 293 1015 -457 9 685 3081 187 7 11 chrUextra 13144167 13144882 -15859774 - SAR_DM Satellite Satellite -569 903 192 9 685 34 24 0 0 chrUextra 13145048 13145089 -15859567 + AT_rich Low_complexity Low_complexity 1 41 0 9 685 21 95 0 0 chrUextra 13145302 13145365 -15859291 + AT_rich Low_complexity Low_complexity 1 63 0 9 685 2682 3 3 72 chrUextra 13145377 13145722 -15858934 + LSU-rRNA_Dme rRNA rRNA 1 321 -3579 9 685 6289 14 1 4 chrUextra 13145822 13146552 -15858104 + STALKER4_I LTR Gypsy 4360 5087 -1443 9 685 22 35 0 0 chrUextra 13146658 13146687 -15857969 + AT_rich Low_complexity Low_complexity 1 29 0 9 685 254 192 41 0 chrUextra 13146884 13146957 -15857699 + (TTATA)n Simple_repeat Simple_repeat 5 80 0 9 685 1786 0 15 0 chrUextra 13147484 13147690 -15856966 - R1_DM LINE R1 -5147 209 1 9 685 476 36 0 0 chrUextra 13147690 13147745 -15856911 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2578 9 685 4359 0 0 0 chrUextra 13147741 13148215 -15856441 - R2_DM LINE R2 -8 3599 3126 9 685 6285 12 0 0 chrUextra 13148318 13149046 -15855610 + BLOOD_I LTR Gypsy 2799 3526 -3087 9 685 1146 8 0 0 chrUextra 13149146 13149275 -15855381 - NTS_DM Other Other -111 129 1 9 685 1835 17 17 17 chrUextra 13149275 13149515 -15855141 - NTS_DM Other Other 0 240 1 9 685 1805 17 17 21 chrUextra 13149515 13149756 -15854900 - NTS_DM Other Other 0 240 1 9 685 651 77 33 33 chrUextra 13149756 13149877 -15854779 - NTS_DM Other Other 0 240 120 9 685 729 12 0 0 chrUextra 13150808 13150889 -15853767 - NTS_DM Other Other -159 81 1 9 685 1794 21 17 21 chrUextra 13150889 13151130 -15853526 - NTS_DM Other Other 0 240 1 9 685 1835 17 17 17 chrUextra 13151130 13151370 -15853286 - NTS_DM Other Other 0 240 1 9 685 1154 18 24 24 chrUextra 13151370 13151539 -15853117 - NTS_DM Other Other 0 240 72 9 685 669 28 36 36 chrUextra 13151639 13151750 -15852906 + NTS_DM Other Other 130 240 0 9 685 1835 17 17 17 chrUextra 13151750 13151990 -15852666 + NTS_DM Other Other 1 240 0 9 685 1824 21 17 17 chrUextra 13151990 13152230 -15852426 + NTS_DM Other Other 1 240 0 9 685 1204 14 0 0 chrUextra 13152230 13152370 -15852286 + NTS_DM Other Other 1 140 -100 9 685 1488 268 59 39 chrUextra 13152471 13153085 -15851571 - ROVER-I_DM LTR Gypsy -4568 2016 1391 9 685 962 0 18 0 chrUextra 13153088 13153201 -15851455 + (TTATA)n Simple_repeat Simple_repeat 2 116 0 9 685 2705 190 5 4 chrUextra 13153306 13154032 -15850624 - SAR_DM Satellite Satellite -716 726 1 9 685 6307 1 1 1 chrUextra 13154132 13154863 -15849793 + ROO_I LTR Pao 7466 8196 -60 9 685 6382 4 1 0 chrUextra 13154963 13155694 -15848962 + Invader2_I LTR Gypsy 2483 3214 -1378 9 685 2686 83 27 33 chrUextra 13155794 13156525 -15848131 + DMSAT6 Satellite Satellite 1 726 -29 9 685 1855 107 95 12 chrUextra 13156626 13157026 -15847630 - Gypsy12_I LTR Gypsy -894 4652 4161 9 685 2418 106 0 0 chrUextra 13157025 13157356 -15847300 - Gypsy12_I LTR Gypsy -1531 4015 3685 9 685 6300 0 1 0 chrUextra 13157456 13158145 -15846511 + SSU-rRNA_Dme rRNA rRNA 1306 1995 0 9 685 1474 201 16 4 chrUextra 13159118 13159848 -15844808 + SAR_DM Satellite Satellite 1 738 -749 9 685 259 159 73 73 chrUextra 13160063 13160131 -15844525 - Gypsy4_I LTR Gypsy -1897 4391 4324 9 685 642 294 85 40 chrUextra 13160154 13160271 -15844385 - Gypsy4_I LTR Gypsy -3195 2972 2767 9 685 1454 30 64 0 chrUextra 13160271 13160474 -15844182 - TLD2 Unknown Unknown -2 216 1 9 685 642 294 85 40 chrUextra 13160474 13160662 -15843994 - Gypsy4_I LTR Gypsy -3195 2766 2431 9 685 2934 199 23 11 chrUextra 13160780 13161510 -15843146 + SAR_DM Satellite Satellite 421 1159 -313 9 685 377 288 36 36 chrUextra 13161634 13161800 -15842856 + Gypsy3_I LTR Gypsy 1324 1546 -4631 9 685 393 234 9 18 chrUextra 13162222 13162331 -15842325 + Gypsy4_I LTR Gypsy 1654 1761 -4527 9 685 5355 38 4 3 chrUextra 13162442 13163173 -15841483 - R1_DM LINE R1 -1864 3492 2728 9 685 3245 190 17 24 chrUextra 13163277 13164004 -15840652 + SAR_DM Satellite Satellite 1 722 -203 9 685 4168 43 19 11 chrUextra 13164105 13164646 -15840010 - PROTOP_B DNA P -608 545 1 9 685 454 95 0 0 chrUextra 13164770 13164833 -15839823 + PROTOP_B DNA P 1 63 -1090 9 685 6443 1 1 3 chrUextra 13164935 13165666 -15838990 - LSU-rRNA_Dme rRNA rRNA -2646 1254 525 9 685 5833 27 23 1 chrUextra 13165766 13166497 -15838159 + PROTOP_B DNA P 32 775 -378 9 685 34 24 0 0 chrUextra 13166835 13166876 -15837780 + AT_rich Low_complexity Low_complexity 1 41 0 9 685 21 95 0 0 chrUextra 13167089 13167152 -15837504 + AT_rich Low_complexity Low_complexity 1 63 0 9 685 1467 6 0 0 chrUextra 13167164 13167325 -15837331 + LSU-rRNA_Dme rRNA rRNA 1 161 -3739 9 685 6104 1 0 0 chrUextra 13167428 13168078 -15836578 - SSU-rRNA_Dme rRNA rRNA -1345 650 1 9 685 6271 29 6 0 chrUextra 13168263 13168990 -15835666 - R1_DM LINE R1 -1966 3390 2660 9 685 6219 33 3 0 chrUextra 13169092 13169818 -15834838 - G2_DM LINE Jockey -718 2384 1657 9 685 2126 56 3 3 chrUextra 13169922 13170207 -15834449 - BATUMI_I LTR Pao -376 7587 7303 9 685 3364 19 28 12 chrUextra 13170230 13170652 -15834004 + BATUMI_I LTR Pao 6427 6855 -1108 9 685 6142 25 1 14 chrUextra 13170752 13171482 -15833174 + FW_DM LINE Jockey 857 1577 -3115 9 685 6186 19 6 12 chrUextra 13171583 13172314 -15832342 - BATUMI_I LTR Pao -5596 2367 1642 9 685 1425 29 0 0 chrUextra 13172414 13172624 -15832032 + (CTATT)n Simple_repeat Simple_repeat 1 210 0 9 685 1085 120 12 4 chrUextra 13172656 13173145 -15831511 + (CTATT)n Simple_repeat Simple_repeat 1 493 0 9 685 6415 18 3 1 chrUextra 13173245 13173976 -15830680 - R1_DM LINE R1 -952 4404 3673 9 685 6552 16 7 0 chrUextra 13174076 13174807 -15829849 - BS LINE Jockey -2055 3071 2336 9 685 2364 200 75 14 chrUextra 13174907 13175560 -15829096 + SAR_DM Satellite Satellite 577 1269 -203 9 685 1257 85 0 0 chrUextra 13175457 13175634 -15829022 - ARS406_DM Unknown Unknown -164 189 13 9 685 5553 38 11 24 chrUextra 13176569 13177272 -15827384 - CIRCE LINE Composite -3508 2848 2155 9 685 244 35 0 0 chrUextra 13177271 13177300 -15827356 - CIRCE LINE Composite -5071 1285 1257 9 685 24 0 0 0 chrUextra 13177475 13177499 -15827157 + AT_rich Low_complexity Low_complexity 1 24 0 9 685 278 182 43 43 chrUextra 13177572 13177687 -15826969 + T-rich Low_complexity Low_complexity 3 117 0 9 685 228 304 20 13 chrUextra 13177876 13178026 -15826630 + (TTTA)n Simple_repeat Simple_repeat 3 153 0 9 685 3289 180 6 19 chrUextra 13178231 13178951 -15825705 + SAR_DM Satellite Satellite 409 1118 -354 9 685 306 172 16 0 chrUextra 13178896 13178960 -15825696 - XDMR Unknown Unknown 0 361 297 9 685 4001 181 20 0 chrUextra 13179062 13179793 -15824863 - HETA LINE telomeric -4115 1966 1221 9 685 27 29 0 0 chrUextra 13180146 13180180 -15824476 + AT_rich Low_complexity Low_complexity 1 34 0 9 685 814 37 0 115 chrUextra 13180500 13180622 -15824034 + Baggins1 LINE LOA 5346 5453 0 9 685 2207 170 37 27 chrUextra 13180724 13181256 -15823400 - TART LINE telomeric -5053 9424 8953 9 685 27 62 0 0 chrUextra 13181398 13181446 -15823210 + AT_rich Low_complexity Low_complexity 1 48 0 9 685 6213 3 0 1 chrUextra 13181555 13182286 -15822370 + QUASIMODO_I LTR Gypsy 4868 5597 -463 9 685 6591 4 12 0 chrUextra 13182386 13183117 -15821539 - Gypsy4_I LTR Gypsy -508 5780 5041 9 685 2107 144 37 145 chrUextra 13183221 13183945 -15820711 + BATUMI_I LTR Pao 441 1086 -6877 9 685 22 0 0 0 chrUextra 13184733 13184755 -15819901 + AT_rich Low_complexity Low_complexity 1 22 0 9 685 28 48 0 0 chrUextra 13184981 13185023 -15819633 + AT_rich Low_complexity Low_complexity 1 42 0 9 685 2419 184 49 29 chrUextra 13185030 13185584 -15819072 + Stalker2_I LTR Gypsy 291 855 -6547 9 685 6219 25 1 11 chrUextra 13185710 13186441 -15818215 + FW_DM LINE Jockey 737 1460 -3232 9 685 740 34 0 0 chrUextra 13186541 13186630 -15818026 - ARS406_DM Unknown Unknown -175 178 90 9 685 2719 190 8 28 chrUextra 13186627 13187272 -15817384 + SAR_DM Satellite Satellite 487 1118 -354 9 685 6228 6 17 1 chrUextra 13187372 13188087 -15816569 - LSU-rRNA_Dme rRNA rRNA -2957 943 218 9 685 5607 49 1 29 chrUextra 13188203 13188933 -15815723 + R1_DM LINE R1 171 880 -4476 9 685 6701 0 1 0 chrUextra 13189034 13189765 -15814891 - ROO_I LTR Pao -5572 2684 1953 9 685 3213 189 18 14 chrUextra 13189865 13190596 -15814060 - SAR_DM Satellite Satellite -539 933 200 9 685 6731 3 0 0 chrUextra 13190696 13191427 -15813229 + DOC LINE Jockey 2085 2815 -1910 9 685 1355 0 23 17 chrUextra 13191527 13191704 -15812952 + NTS_DM Other Other 63 240 0 9 685 1972 4 17 13 chrUextra 13191704 13191943 -15812713 + NTS_DM Other Other 1 240 0 9 685 1388 6 0 18 chrUextra 13191943 13192108 -15812548 + NTS_DM Other Other 1 162 -78 9 685 303 73 0 0 chrUextra 13192217 13192258 -15812398 + NTS_DM Other Other 4 44 -196 9 685 6645 1 0 0 chrUextra 13192358 13193089 -15811567 - ROO_I LTR Pao -4994 3262 2532 9 685 3294 179 10 12 chrUextra 13193189 13193912 -15810744 - SAR_DM Satellite Satellite -557 915 195 9 685 6708 1 1 3 chrUextra 13194021 13194751 -15809905 - SSU-rRNA_Dme rRNA rRNA -486 1509 781 9 685 425 251 4 0 chrUextra 13195685 13195783 -15808873 - Gypsy_I LTR Gypsy -183 6324 6148 9 685 5109 4 0 0 chrUextra 13195853 13196413 -15808243 + QUASIMODO_LTR LTR Gypsy 1 560 -98 9 685 198 0 0 160 chrUextra 13196514 13196683 -15807973 + (CAAGA)n Simple_repeat Simple_repeat 2 143 0 9 685 235 222 65 65 chrUextra 13197549 13197626 -15807030 + DM1731_I LTR Copia 530 606 -3370 9 685 2133 286 25 18 chrUextra 13199006 13199726 -15804930 - FROGGER_I LTR Copia -334 1743 1019 9 685 647 46 11 33 chrUextra 13199837 13199927 -15804729 - NTS_DM Other Other -128 112 25 9 685 1302 18 0 12 chrUextra 13199979 13200145 -15804511 - NTS_DM Other Other -39 201 38 9 685 928 9 0 27 chrUextra 13200145 13200257 -15804399 - NTS_DM Other Other -107 133 25 9 685 1332 18 0 6 chrUextra 13200310 13200475 -15804181 - NTS_DM Other Other -39 201 38 9 685 820 11 0 0 chrUextra 13200475 13200568 -15804088 - NTS_DM Other Other -107 133 41 9 685 6515 16 0 0 chrUextra 13201499 13202230 -15802426 + R1_DM LINE R1 1542 2272 -3084 9 685 6311 14 0 0 chrUextra 13202330 13203061 -15801595 - Invader2_I LTR Gypsy -1214 3378 2648 9 685 1565 0 0 0 chrUextra 13203199 13203369 -15801287 - Copia2_LTR_DM LTR Copia 0 198 29 9 685 3291 10 90 0 chrUextra 13203369 13203757 -15800899 - Invader1_LTR LTR Gypsy 0 423 1 9 685 4157 20 134 3 chrUextra 13203992 13204657 -15799999 - Invader2_I LTR Gypsy -1968 2624 1873 9 685 429 0 20 0 chrUextra 13204674 13204723 -15799933 - Invader2_I LTR Gypsy -3442 1150 1101 9 685 3576 66 4 4 chrUextra 13204824 13205282 -15799374 - R1_DM LINE R1 -4898 458 1 9 685 2185 17 0 0 chrUextra 13205315 13205554 -15799102 - R1_DM LINE R1 0 5356 5118 9 685 2101 59 20 17 chrUextra 13206485 13206777 -15797879 - CIRCE LINE Composite -1083 5273 4981 9 685 748 24 0 0 chrUextra 13207131 13207216 -15797440 - CIRCE LINE Composite -1376 4980 4896 9 685 6368 23 1 3 chrUextra 13207316 13208047 -15796609 + MAX_I LTR Pao 1644 2373 -5541 9 685 3231 0 8 0 chrUextra 13208147 13208499 -15796157 + SSU-rRNA_Dme rRNA rRNA 1641 1995 0 9 685 58 15 0 0 chrUextra 13209129 13209194 -15795462 + AT_rich Low_complexity Low_complexity 1 65 0 9 685 22 35 0 0 chrUextra 13209369 13209398 -15795258 + AT_rich Low_complexity Low_complexity 1 29 0 9 685 6015 1 0 37 chrUextra 13209809 13210540 -15794116 - DM176_I LTR Gypsy -4896 1524 821 9 685 834 72 24 8 chrUextra 13210660 13210786 -15793870 + STALKER4_I LTR Gypsy 758 885 -5645 9 685 687 172 92 75 chrUextra 13211132 13211371 -15793285 + STALKER4_I LTR Gypsy 885 1127 -5403 9 685 6689 3 1 0 chrUextra 13211471 13212202 -15792454 - DMRT1B LINE R1 -557 4626 3895 9 685 2739 142 16 0 chrUextra 13212305 13212736 -15791920 + IDEFIX_I LTR Gypsy 3826 4263 -1365 9 685 1591 161 0 34 chrUextra 13212735 13213031 -15791625 + IDEFIX_I LTR Gypsy 4504 4789 -839 9 685 6620 4 3 0 chrUextra 13213964 13214695 -15789961 + DOC LINE Jockey 1086 1818 -2907 9 685 1670 21 0 0 chrUextra 13214795 13214982 -15789674 - R1_DM LINE R1 -611 4745 4559 9 685 4777 16 2 2 chrUextra 13214980 13215526 -15789130 - R1_DM LINE R1 -1270 4086 3541 9 685 6802 4 0 0 chrUextra 13215626 13216357 -15788299 + R2_DM LINE R2 2015 2745 -862 9 685 1505 6 0 6 chrUextra 13217288 13217463 -15787193 + (GAGAA)n Simple_repeat Simple_repeat 2 175 0 9 685 6434 22 7 0 chrUextra 13218119 13218850 -15785806 + DMRT1A LINE R1 2639 3374 -1809 9 685 2618 180 18 11 chrUextra 13218950 13220510 -15784146 - DMSAT6 Satellite Satellite -23 1571 1 9 685 3531 231 1 1 chrUextra 13220612 13221340 -15783316 - Gypsy6_I LTR Gypsy -2322 4690 3963 9 685 1120 28 0 7 chrUextra 13221443 13221586 -15783070 - NTS_DM Other Other -61 179 38 9 685 870 0 0 0 chrUextra 13221586 13221682 -15782974 - NTS_DM Other Other -107 133 38 9 685 871 19 9 27 chrUextra 13221682 13221793 -15782863 - NTS_DM Other Other -107 133 25 9 685 21 57 0 0 chrUextra 13221819 13221854 -15782802 + AT_rich Low_complexity Low_complexity 1 35 0 9 685 1332 18 0 6 chrUextra 13221854 13222019 -15782637 - NTS_DM Other Other -39 201 38 9 685 928 9 0 27 chrUextra 13222019 13222131 -15782525 - NTS_DM Other Other -107 133 25 9 685 5071 4 4 0 chrUextra 13222274 13222828 -15781828 - R1_DM LINE R1 -4800 556 1 9 685 1466 6 6 6 chrUextra 13222828 13223005 -15781651 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2456 9 685 279 73 29 106 chrUextra 13223156 13223225 -15781431 + DMTOM1_LTR LTR Gypsy 308 403 -7 9 685 618 204 109 116 chrUextra 13223225 13223830 -15780826 + ROVER-I_DM LTR Gypsy 1 601 -5983 9 685 592 0 0 14 chrUextra 13223936 13224008 -15780648 - R1_DM LINE R1 -486 4870 4800 9 685 659 26 0 0 chrUextra 13224001 13224079 -15780577 - LSU-rRNA_Dme rRNA rRNA -1245 2655 2578 9 685 5077 2 0 2 chrUextra 13224083 13224667 -15779989 - R2_DM LINE R2 0 3607 3025 9 685 6133 15 0 3 chrUextra 13224767 13225498 -15779158 - Invader1_I LTR Gypsy -2179 1007 279 9 685 6332 4 0 0 chrUextra 13225598 13226329 -15778327 + DOC LINE Jockey 3691 4421 -304 9 685 5884 0 3 0 chrUextra 13226429 13227160 -15777496 + DM412 LTR Gypsy 1186 1918 -4979 9 685 1769 171 8 10 chrUextra 13227480 13227875 -15776781 + SAR_DM Satellite Satellite 594 987 -485 9 685 34 24 0 0 chrUextra 13228779 13228820 -15775836 + AT_rich Low_complexity Low_complexity 1 41 0 9 685 657 0 0 0 chrUextra 13228922 13228997 -15775659 - GTWIN_I LTR Gypsy -6346 75 1 9 685 4346 0 0 0 chrUextra 13228997 13229492 -15775164 - GTWIN_LTR LTR Gypsy 0 495 1 9 685 1420 0 0 0 chrUextra 13229492 13229653 -15775003 - GTWIN_I LTR Gypsy 0 6421 6261 9 685 4204 75 67 11 chrUextra 13229773 13230484 -15774172 + Gypsy12_I LTR Gypsy 4531 5281 -265 9 685 3057 165 26 13 chrUextra 13230594 13231293 -15773363 + SAR_DM Satellite Satellite 369 1076 -396 9 685 6265 7 0 0 chrUextra 13231415 13232146 -15772510 + R1_DM LINE R1 4442 5172 -184 9 685 2109 185 18 10 chrUextra 13232270 13232783 -15771873 - SAR_DM Satellite Satellite -396 1076 560 9 685 315 216 29 10 chrUextra 13232697 13232800 -15771856 + ARS406_DM Unknown Unknown 1 105 -248 9 685 639 185 0 7 chrUextra 13232830 13232977 -15771679 - SAR_DM Satellite Satellite -774 698 553 9 685 3266 28 2 0 chrUextra 13233077 13233476 -15771180 - R1_DM LINE R1 -550 4806 4407 9 685 2584 13 0 0 chrUextra 13233496 13233808 -15770848 - R1_DM LINE R1 -1074 4282 3971 9 685 6039 16 26 0 chrUextra 13233908 13234639 -15770017 - Gypsy4_I LTR Gypsy -2031 4257 3508 9 685 6086 7 6 0 chrUextra 13234743 13235470 -15769186 + Gypsy4_I LTR Gypsy 4265 4995 -1293 9 685 400 341 39 36 chrUextra 13235578 13236019 -15768637 - Copia2_I LTR Copia -1269 2893 2452 9 685 279 0 0 0 chrUextra 13236401 13236434 -15768222 - LSU-rRNA_Dme rRNA rRNA -2080 1820 1788 9 685 5397 5 5 6 chrUextra 13236478 13237132 -15767524 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1136 9 685 6292 4 0 0 chrUextra 13237232 13237963 -15766693 - R1_DM LINE R1 -2491 2865 2135 9 85 6122 8 0 0 chrUextra 13238063 13238794 -15765862 + MDG1_I LTR Gypsy 3132 3862 -2734 9 686 281 0 0 0 chrUextra 13238894 13238930 -15765726 - Copia2_I LTR Copia -2894 1268 1233 9 686 5950 6 9 0 chrUextra 13238925 13239625 -15765031 - Copia2_I LTR Copia -3039 1123 418 9 686 414 0 0 0 chrUextra 13239725 13239773 -15764883 + PROTOP_B DNA P 1106 1153 0 9 686 4505 9 8 0 chrUextra 13239923 13240456 -15764200 + Copia2_I LTR Copia 3526 4062 -100 9 686 6106 7 4 0 chrUextra 13240556 13241287 -15763369 - ROO_I LTR Pao -3758 4498 3765 9 686 3355 171 6 7 chrUextra 13241388 13242111 -15762545 - SAR_DM Satellite Satellite -425 1047 326 9 686 5841 11 0 11 chrUextra 13242218 13242949 -15761707 + Gypsy4_I LTR Gypsy 15 737 -5551 9 686 6206 14 1 0 chrUextra 13243049 13243780 -15760876 + DM1731_I LTR Copia 811 1542 -2434 9 686 6382 1 0 0 chrUextra 13243880 13244611 -15760045 + DOC LINE Jockey 3557 4287 -438 9 686 3202 163 18 17 chrUextra 13244716 13245441 -15759215 - SAR_DM Satellite Satellite -371 1101 376 9 686 5747 4 4 6 chrUextra 13246371 13247061 -15757595 + LSU-rRNA_Dme rRNA rRNA 1100 1788 -2112 9 686 1712 171 0 12 chrUextra 13247201 13247544 -15757112 - STALKER4_I LTR Gypsy -5957 573 235 9 686 31 58 0 0 chrUextra 13247545 13247597 -15757059 + AT_rich Low_complexity Low_complexity 1 52 0 9 686 1524 87 3 32 chrUextra 13247685 13247931 -15756725 - STALKER4_LTR LTR Gypsy -3 399 165 9 686 2065 26 4 25 chrUextra 13248377 13248655 -15756001 + BATUMI_LTR LTR Pao 1 272 0 9 686 916 9 0 0 chrUextra 13248655 13248761 -15755895 + BATUMI_I LTR Pao 1 106 -7857 9 686 685 83 74 0 chrUextra 13248861 13248969 -15755687 + R1_DM LINE R1 5172 5287 -69 9 686 5017 25 0 0 chrUextra 13248991 13249591 -15755065 + R2_DM LINE R2 1932 2531 -1076 9 686 262 106 0 21 chrUextra 13250528 13250576 -15754080 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 9 686 3089 172 15 18 chrUextra 13251362 13252078 -15752578 - SAR_DM Satellite Satellite -535 937 224 9 686 6112 3 0 0 chrUextra 13252186 13252911 -15751745 + LSU-rRNA_Dme rRNA rRNA 218 942 -2958 9 686 6131 4 1 0 chrUextra 13253011 13253741 -15750915 - MDG1_I LTR Gypsy -1492 5104 4374 9 686 1560 174 6 6 chrUextra 13254671 13255006 -15749650 + SAR_DM Satellite Satellite 416 750 -722 9 686 3098 16 0 13 chrUextra 13255014 13255401 -15749255 - DOC2_DM LINE Jockey 0 4793 4412 9 686 5724 15 0 0 chrUextra 13255555 13256231 -15748425 + Gypsy4_I LTR Gypsy 374 1049 -5239 9 686 2115 174 8 11 chrUextra 13256333 13256835 -15747821 + SAR_DM Satellite Satellite 1 674 -493 9 686 1251 85 0 0 chrUextra 13256835 13257024 -15747632 - ARS406_DM Unknown Unknown -164 189 1 9 686 2115 174 8 11 chrUextra 13257024 13257059 -15747597 + SAR_DM Satellite Satellite 675 723 -444 9 686 2304 53 0 0 chrUextra 13257161 13257462 -15747194 + R1_DM LINE R1 1493 1793 -3563 9 686 1939 161 25 40 chrUextra 13257463 13257865 -15746791 + R1_DM LINE R1 310 705 -4651 9 686 6142 10 6 0 chrUextra 13257991 13258721 -15745935 + DMRT1A LINE R1 1270 2003 -3180 9 686 5456 36 8 22 chrUextra 13258821 13259551 -15745105 - CIRCE LINE Composite -3465 2891 2172 9 686 2102 175 23 55 chrUextra 13259651 13260381 -15744275 - SAR_DM Satellite Satellite -675 706 1 9 686 2686 51 14 0 chrUextra 13260481 13260851 -15743805 - PROTOP_A DNA P -657 448 74 9 686 1793 176 7 7 chrUextra 13261311 13262037 -15742619 - SAR_DM Satellite Satellite -664 726 1 9 686 1414 129 109 97 chrUextra 13262145 13262558 -15742098 + HMSBEAGLE_I LTR Gypsy 161 578 -5951 9 686 1460 118 55 0 chrUextra 13262630 13262868 -15741788 - Invader1_LTR LTR Gypsy 0 423 173 9 686 6299 3 0 0 chrUextra 13262971 13263701 -15740955 - DOC LINE Jockey -1785 2940 2211 9 686 546 125 192 0 chrUextra 13263871 13263971 -15740685 + HOBO DNA hAT 193 312 -2704 9 686 1897 101 191 17 chrUextra 13263971 13264378 -15740278 + PROTOP_B DNA P 1 478 -675 9 686 1224 74 6 0 chrUextra 13264355 13264531 -15740125 + HOBO DNA hAT 330 506 -2510 9 686 2895 184 18 26 chrUextra 13264635 13265361 -15739295 + SAR_DM Satellite Satellite 1 720 -208 9 686 364 98 0 0 chrUextra 13265461 13265512 -15739144 - HETRP_DM Satellite Satellite -293 1579 1529 9 686 668 179 7 14 chrUextra 13265679 13265821 -15738835 - HETRP_DM Satellite Satellite -203 1669 1529 9 686 640 193 7 14 chrUextra 13265961 13266103 -15738553 - HETRP_DM Satellite Satellite -203 1669 1529 9 686 5973 7 0 0 chrUextra 13266291 13266982 -15737674 - Invader4_I LTR Gypsy -1722 691 1 9 686 342 0 0 0 chrUextra 13266982 13267021 -15737635 - Invader4_LTR LTR Gypsy 0 346 308 9 686 1620 0 0 0 chrUextra 13267121 13267480 -15737176 + (TTCTC)n Simple_repeat Simple_repeat 1 359 0 9 686 1082 34 96 0 chrUextra 13267705 13267851 -15736805 - DNAREP1_DM LINE Penelope -9 585 426 9 686 1392 18 0 0 chrUextra 13267951 13268118 -15736538 + CIRCE LINE Composite 1707 1873 -4483 9 686 4279 21 4 9 chrUextra 13268148 13268681 -15735975 + CIRCE LINE Composite 2015 2544 -3812 9 686 5920 37 1 0 chrUextra 13269611 13270341 -15734315 + DMCR1A LINE CR1 863 1593 -2877 9 686 6161 1 0 0 chrUextra 13270441 13271171 -15733485 + QUASIMODO_I LTR Gypsy 1202 1931 -4129 9 686 6255 4 0 0 chrUextra 13271271 13272001 -15732655 + DMRT1B LINE R1 1197 1926 -3257 9 686 1316 74 0 16 chrUextra 13272931 13273421 -15731235 + (CTTAT)n Simple_repeat Simple_repeat 1 481 0 9 686 1201 37 0 31 chrUextra 13273436 13273661 -15730995 + (CTTAT)n Simple_repeat Simple_repeat 1 218 0 9 686 599 13 66 0 chrUextra 13273761 13273837 -15730819 - Baggins1 LINE LOA -1891 3562 3482 9 686 379 200 11 0 chrUextra 13273824 13273914 -15730742 - DNAREP1_DM LINE Penelope -480 114 24 9 686 596 120 31 0 chrUextra 13274293 13274409 -15730247 - Gypsy12A_LTR LTR Gypsy -1 2335 2130 9 686 243 184 0 20 chrUextra 13274441 13274491 -15730165 - Gypsy12A_LTR LTR Gypsy -249 2031 1983 9 686 4947 5 0 0 chrUextra 13274591 13275171 -15729485 + DMRT1B LINE R1 4464 5043 -140 9 686 1119 73 0 0 chrUextra 13275171 13275321 -15729335 + (TTGTG)n Simple_repeat Simple_repeat 4 153 0 9 686 2661 23 6 9 chrUextra 13275421 13275766 -15728890 - CIRCE LINE Composite -1032 5324 4981 9 686 241 32 0 0 chrUextra 13276116 13276147 -15728509 - CIRCE LINE Composite -1376 4980 4950 9 686 5807 4 0 16 chrUextra 13276251 13276981 -15727675 - R1_DM LINE R1 -1641 3715 2998 9 686 1157 15 0 0 chrUextra 13277256 13277391 -15727265 + 5S_DM RNA RNA 1 135 0 9 686 1150 7 0 0 chrUextra 13277625 13277760 -15726896 + 5S_DM RNA RNA 1 135 0 9 686 2781 182 16 20 chrUextra 13277911 13278641 -15726015 - SAR_DM Satellite Satellite -626 727 1 9 686 6161 0 1 8 chrUextra 13278741 13279471 -15725185 - SSU-rRNA_Dme rRNA rRNA -288 1707 983 9 686 298 28 0 0 chrUextra 13279574 13279610 -15725046 - NTS_DM Other Other -204 36 1 9 686 1734 21 17 17 chrUextra 13279610 13279850 -15724806 - NTS_DM Other Other 0 240 1 9 686 1756 17 17 17 chrUextra 13279850 13280090 -15724566 - NTS_DM Other Other 0 240 1 9 686 1498 19 19 19 chrUextra 13280090 13280301 -15724355 - NTS_DM Other Other 0 240 30 9 686 330 283 84 38 chrUextra 13280403 13280642 -15724014 + MICROPIA_I LTR Gypsy 3534 3783 -693 9 686 314 294 121 12 chrUextra 13280739 13280904 -15723752 + MICROPIA_I LTR Gypsy 3668 3850 -626 9 686 342 171 29 0 chrUextra 13281061 13281131 -15723525 - PROTOP_B DNA P -200 953 882 9 686 1237 0 0 0 chrUextra 13281231 13281376 -15723280 + R1_DM LINE R1 4922 5066 -290 9 686 954 26 0 0 chrUextra 13281373 13281487 -15723169 + R1_DM LINE R1 5243 5356 0 9 686 3107 75 9 5 chrUextra 13281520 13281961 -15722695 + R1_DM LINE R1 1 443 -4913 9 686 3253 180 7 8 chrUextra 13282061 13282791 -15721865 + SAR_DM Satellite Satellite 295 1023 -449 9 686 1349 0 0 0 chrUextra 13283208 13283367 -15721289 - FW_DM LINE Jockey -4515 177 19 9 686 3259 151 22 23 chrUextra 13283723 13284451 -15720205 + SAR_DM Satellite Satellite 293 1019 -453 9 686 3143 180 7 6 chrUextra 13284559 13285268 -15719388 - SAR_DM Satellite Satellite -539 933 224 9 686 442 99 0 0 chrUextra 13285206 13285277 -15719379 + ARS406_DM Unknown Unknown 1 71 -282 9 686 2800 189 12 16 chrUextra 13285382 13286111 -15718545 + SAR_DM Satellite Satellite 1 725 -291 9 686 6403 0 0 0 chrUextra 13286211 13286941 -15717715 - Gypsy6_I LTR Gypsy -169 6843 6114 9 686 1594 61 0 101 chrUextra 13287041 13287298 -15717358 - CIRCE LINE Composite -5153 1203 973 9 686 2594 9 97 0 chrUextra 13287440 13287771 -15716885 - CIRCE LINE Composite -5386 970 608 9 686 3828 33 2 0 chrUextra 13287874 13288355 -15716301 - R1_DM LINE R1 -4154 1202 721 9 686 1294 62 0 17 chrUextra 13288366 13288547 -15716109 - R1_DM LINE R1 -4955 401 224 9 686 563 42 0 0 chrUextra 13288530 13288601 -15716055 - R1_DM LINE R1 -118 5238 5168 9 686 4118 8 62 2 chrUextra 13288701 13289230 -15715426 + MDG3_I LTR Gypsy 4426 4986 0 9 686 1397 16 5 70 chrUextra 13289230 13289431 -15715225 + MDG3_LTR LTR Gypsy 1 188 -79 9 686 2483 204 33 14 chrUextra 13289531 13290261 -15714395 + SAR_DM Satellite Satellite 459 1202 -270 9 686 201 121 0 0 chrUextra 13290702 13290735 -15713921 + (TC)n Simple_repeat Simple_repeat 1 33 0 9 686 644 186 7 14 chrUextra 13291213 13291355 -15713301 + HETRP_DM Satellite Satellite 1529 1669 -203 9 686 668 179 7 14 chrUextra 13291522 13291664 -15712992 + HETRP_DM Satellite Satellite 1529 1669 -203 9 686 473 169 0 11 chrUextra 13291827 13291917 -15712739 + HETRP_DM Satellite Satellite 1529 1617 -255 9 686 4403 2 0 0 chrUextra 13292021 13292530 -15712126 - R1_DM LINE R1 -1991 3365 2857 9 686 1957 0 0 4 chrUextra 13292525 13292751 -15711905 - LSU-rRNA_Dme rRNA rRNA -1246 2654 2430 9 686 1319 12 0 0 chrUextra 13292851 13293022 -15711634 + STALKER4_I LTR Gypsy 6360 6530 0 9 686 3040 58 11 14 chrUextra 13293022 13293457 -15711199 + STALKER4_LTR LTR Gypsy 1 399 -3 9 686 734 146 0 0 chrUextra 13293458 13293581 -15711075 - Invader1_I LTR Gypsy -681 2505 2383 9 686 5446 24 41 15 chrUextra 13293681 13294411 -15710245 - ROO_I LTR Pao -4068 4188 3440 9 686 832 20 0 0 chrUextra 13294511 13294613 -15710043 + NTS_DM Other Other 32 133 -107 9 686 1252 18 0 6 chrUextra 13294613 13294778 -15709878 + NTS_DM Other Other 38 201 -39 9 686 21 57 0 0 chrUextra 13294778 13294813 -15709843 + AT_rich Low_complexity Low_complexity 1 35 0 9 686 832 9 9 27 chrUextra 13294839 13294950 -15709706 + NTS_DM Other Other 25 133 -107 9 686 817 0 0 0 chrUextra 13294950 13295046 -15709610 + NTS_DM Other Other 38 133 -107 9 686 1337 21 20 20 chrUextra 13295046 13295241 -15709415 + NTS_DM Other Other 38 232 -8 9 686 6285 1 0 1 chrUextra 13295341 13296071 -15708585 - R1_DM LINE R1 -3340 2016 1288 9 686 3985 72 23 14 chrUextra 13296171 13296747 -15707909 + R1_DM LINE R1 1663 2243 -3113 9 686 6238 1 1 1 chrUextra 13297001 13297731 -15706925 + R1_DM LINE R1 1099 1828 -3528 9 686 3005 190 11 20 chrUextra 13298661 13299391 -15705265 + SAR_DM Satellite Satellite 1 723 -216 9 686 6179 0 1 0 chrUextra 13299491 13300221 -15704435 - TABOR_I LTR Gypsy -5307 1029 299 9 686 5766 29 0 7 chrUextra 13300321 13301051 -15703605 + R1_DM LINE R1 2223 2947 -2409 9 686 3105 183 11 11 chrUextra 13301152 13301881 -15702775 + SAR_DM Satellite Satellite 195 923 -549 9 686 5913 12 1 3 chrUextra 13301981 13302711 -15701945 - STALKER4_I LTR Gypsy -1119 5411 4683 9 686 6123 7 33 0 chrUextra 13302811 13303541 -15701115 - Invader3_I LTR Gypsy -2953 1935 1182 9 686 1171 164 136 32 chrUextra 13303644 13303953 -15700703 - TART LINE telomeric -5085 9392 9052 9 686 3516 7 0 0 chrUextra 13303955 13304371 -15700285 - G2_DM LINE Jockey 0 3102 2687 9 686 327 0 24 0 chrUextra 13304471 13304512 -15700144 - LSU-rRNA_Dme rRNA rRNA -2071 1829 1788 9 686 5380 3 5 5 chrUextra 13304556 13305201 -15699455 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1144 9 686 2045 0 0 4 chrUextra 13305301 13305537 -15699119 + SSU-rRNA_Dme rRNA rRNA 1761 1995 0 9 686 21 89 0 0 chrUextra 13305556 13305612 -15699044 + AT_rich Low_complexity Low_complexity 1 56 0 9 686 2810 194 26 8 chrUextra 13306133 13306860 -15697796 - SAR_DM Satellite Satellite -495 977 238 9 686 1007 265 108 87 chrUextra 13306962 13307676 -15696980 - Gypsy12_LTR LTR Gypsy -1371 965 237 9 686 897 173 102 15 chrUextra 13308125 13308330 -15696326 + DMLTR5 LTR Gypsy 44 266 0 9 686 351 85 661 14 chrUextra 13308329 13308461 -15696195 + HMSBEAGLE_I LTR Gypsy 1 221 -6308 9 686 1909 184 7 11 chrUextra 13308621 13309067 -15695589 + SAR_DM Satellite Satellite 460 903 -569 9 686 1040 213 4 4 chrUextra 13309082 13309351 -15695305 + SAR_DM Satellite Satellite 496 764 -708 9 686 1227 18 6 23 chrUextra 13310281 13310454 -15694202 - NTS_DM Other Other -46 194 25 9 686 255 125 0 0 chrUextra 13310520 13310560 -15694096 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 686 246 150 0 0 chrUextra 13310603 13310643 -15694013 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 686 246 150 0 0 chrUextra 13310695 13310735 -15693921 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 686 246 150 0 0 chrUextra 13310787 13310827 -15693829 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 686 27 29 0 0 chrUextra 13310832 13310866 -15693790 + AT_rich Low_complexity Low_complexity 1 34 0 9 686 639 0 0 0 chrUextra 13310938 13311011 -15693645 - LSU-rRNA_Dme rRNA rRNA 0 3900 3828 9 686 5494 2 2 0 chrUextra 13311943 13312571 -15692085 - SSU-rRNA_Dme rRNA rRNA -1366 629 1 9 686 263 53 0 0 chrUextra 13312771 13312809 -15691847 - ACCORD2_I LTR Gypsy -53 7159 7122 9 686 1034 24 254 32 chrUextra 13312805 13313022 -15691634 - ACCORD2_I LTR Gypsy -5441 1771 1507 9 686 2142 25 14 11 chrUextra 13313103 13313389 -15691267 - ACCORD2_I LTR Gypsy -5845 1367 1081 9 686 953 9 0 0 chrUextra 13313389 13313501 -15691155 + MICROPIA_LTR LTR Gypsy 1 112 -364 9 686 1008 58 0 28 chrUextra 13313601 13313743 -15690913 - STALKER4_I LTR Gypsy -5955 575 438 9 686 4912 12 24 0 chrUextra 13313741 13314331 -15690325 + SSU-rRNA_Dme rRNA rRNA 453 1056 -939 9 686 2267 100 12 32 chrUextra 13314431 13315157 -15689499 - DMSAT6 Satellite Satellite -94 711 1 9 686 837 106 8 92 chrUextra 13315511 13315761 -15688895 + BATUMI_I LTR Pao 504 732 -7231 9 686 1270 50 35 39 chrUextra 13315761 13315990 -15688666 + BATUMI_I LTR Pao 603 830 -7133 9 686 2064 227 97 37 chrUextra 13316112 13316821 -15687835 + ROVER-I_DM LTR Gypsy 1659 2410 -4174 9 686 3172 175 10 10 chrUextra 13316925 13317651 -15687005 - SAR_DM Satellite Satellite -535 937 212 9 686 1597 0 0 0 chrUextra 13317751 13317932 -15686724 + SSU-rRNA_Dme rRNA rRNA 1815 1995 0 9 686 21 89 0 0 chrUextra 13317951 13318007 -15686649 + AT_rich Low_complexity Low_complexity 1 56 0 9 686 2536 185 5 9 chrUextra 13318608 13319191 -15685465 - SAR_DM Satellite Satellite -396 1076 496 9 686 796 30 0 0 chrUextra 13319196 13319296 -15685360 + ARS406_DM Unknown Unknown 90 189 -164 9 686 514 146 0 19 chrUextra 13319206 13319311 -15685345 - SAR_DM Satellite Satellite -569 903 801 9 686 2302 108 20 30 chrUextra 13319430 13320141 -15684515 + DMSAT6 Satellite Satellite 1 703 0 9 686 1447 83 3 26 chrUextra 13320241 13320476 -15684180 + STALKER4_LTR LTR Gypsy 205 399 -3 9 686 33 56 0 0 chrUextra 13320562 13320616 -15684040 + AT_rich Low_complexity Low_complexity 1 54 0 9 686 1617 179 14 12 chrUextra 13320617 13320961 -15683695 + STALKER4_I LTR Gypsy 235 579 -5951 9 686 364 66 31 47 chrUextra 13321071 13321135 -15683521 - DMRT1A LINE R1 -286 4897 4835 9 686 5229 24 14 1 chrUextra 13321116 13321778 -15682878 + Transib5 DNA Transib 997 1666 -1335 9 686 625 80 0 0 chrUextra 13321901 13321989 -15682667 - Baggins1 LINE LOA -575 4878 4791 9 686 1469 16 0 69 chrUextra 13322429 13322631 -15682025 - Baggins1 LINE LOA 0 5453 5266 9 686 1411 196 135 23 chrUextra 13322752 13323232 -15681424 - Gypsy12_LTR LTR Gypsy -753 1583 1050 9 686 630 251 0 11 chrUextra 13323261 13323450 -15681206 - Gypsy12_LTR LTR Gypsy -1564 772 586 9 686 1620 6 0 0 chrUextra 13323561 13323915 -15680741 + (GAGAA)n Simple_repeat Simple_repeat 1 354 0 9 686 1194 0 0 7 chrUextra 13324391 13324532 -15680124 + LSU-rRNA_Dme rRNA rRNA 2420 2559 -1341 9 686 4955 8 2 2 chrUextra 13324534 13325121 -15679535 + R2_DM LINE R2 2554 3140 -467 9 686 6356 7 0 0 chrUextra 13325221 13325951 -15678705 - MICROPIA_I LTR Gypsy -1967 2509 1780 9 686 1569 131 194 14 chrUextra 13326051 13326422 -15678234 - DNAREP1_DM LINE Penelope -156 438 1 9 686 307 196 78 10 chrUextra 13326425 13326528 -15678128 + XDMR_DM Unknown Unknown 176 285 -75 9 686 1620 0 0 0 chrUextra 13326575 13326781 -15677875 + (TTCTC)n Simple_repeat Simple_repeat 1 206 0 9 686 5241 59 20 3 chrUextra 13326881 13327611 -15677045 - R1_DM LINE R1 -4474 882 140 9 686 5971 18 0 0 chrUextra 13327711 13328441 -15676215 + FW_DM LINE Jockey 2566 3295 -1397 9 686 4630 100 6 4 chrUextra 13328541 13329271 -15675385 + S_DM DNA Tc1 62 792 -944 9 686 2354 100 49 25 chrUextra 13329371 13330101 -15674555 - DMSAT6 Satellite Satellite 0 748 1 9 686 1041 8 0 0 chrUextra 13330201 13330330 -15674326 - STALKER4_LTR LTR Gypsy -273 129 1 9 686 4945 21 2 0 chrUextra 13330330 13330931 -15673725 + FW_DM LINE Jockey 3240 3841 -851 9 686 2575 202 45 8 chrUextra 13331031 13331761 -15672895 - SAR_DM Satellite Satellite -308 1164 408 9 686 6291 6 0 0 chrUextra 13331868 13332591 -15672065 - R2_DM LINE R2 -82 3525 2803 9 686 298 329 12 12 chrUextra 13332710 13332879 -15671777 - BLASTOPIA_I LTR Gypsy -772 3709 3541 9 686 2523 181 50 18 chrUextra 13333521 13334251 -15670405 - SAR_DM Satellite Satellite -558 753 1 9 686 780 175 0 0 chrUextra 13334360 13334520 -15670136 - SAR_DM Satellite Satellite -774 698 539 9 686 3097 230 20 24 chrUextra 13334531 13335911 -15668745 - SAR_DM Satellite Satellite -683 1375 1 9 686 6135 3 1 0 chrUextra 13336011 13336741 -15667915 + MDG3_I LTR Gypsy 3395 4125 -861 9 686 3015 185 8 16 chrUextra 13336844 13337571 -15667085 - SAR_DM Satellite Satellite -361 1111 391 9 686 1530 0 6 0 chrUextra 13337671 13337848 -15666808 + LSU-rRNA_Dme rRNA rRNA 3723 3900 0 9 686 29 28 0 0 chrUextra 13337920 13337956 -15666700 + AT_rich Low_complexity Low_complexity 1 36 0 9 686 246 150 0 0 chrUextra 13337961 13338001 -15666655 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 686 246 150 0 0 chrUextra 13338053 13338093 -15666563 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 686 246 150 0 0 chrUextra 13338145 13338185 -15666471 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 686 246 150 0 0 chrUextra 13338237 13338277 -15666379 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 686 255 125 0 0 chrUextra 13338320 13338360 -15666296 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 686 5960 28 0 4 chrUextra 13338501 13339231 -15665425 - DMCR1A LINE CR1 -2977 1493 767 9 686 246 150 0 0 chrUextra 13339352 13339392 -15665264 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 686 230 150 0 0 chrUextra 13339435 13339475 -15665181 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 686 22 56 0 0 chrUextra 13339488 13339524 -15665132 + AT_rich Low_complexity Low_complexity 1 36 0 9 686 870 9 0 27 chrUextra 13339550 13339662 -15664994 + NTS_DM Other Other 25 133 -107 9 686 1252 18 0 6 chrUextra 13339662 13339827 -15664829 + NTS_DM Other Other 38 201 -39 9 686 870 9 0 27 chrUextra 13339879 13339991 -15664665 + NTS_DM Other Other 25 133 -107 9 686 607 0 0 0 chrUextra 13339991 13340061 -15664595 + NTS_DM Other Other 38 107 -133 9 686 5881 30 0 4 chrUextra 13340161 13340891 -15663765 - R1_DM LINE R1 -3292 2064 1338 9 686 1945 24 71 4 chrUextra 13340991 13341245 -15663411 - PROTOP DNA P -4209 271 1 9 686 6309 4 0 0 chrUextra 13341821 13342551 -15662105 + R1_DM LINE R1 1918 2647 -2709 9 686 5679 16 3 4 chrUextra 13342651 13343381 -15661275 - IDEFIX_I LTR Gypsy -1700 3928 3200 9 686 1508 0 0 11 chrUextra 13343481 13343663 -15660993 + BATUMI_I LTR Pao 7784 7963 0 9 686 2001 35 3 34 chrUextra 13343663 13343954 -15660702 + BATUMI_I LTR Pao 7002 7283 -680 9 686 1205 24 12 12 chrUextra 13343954 13344121 -15660535 + (TTATA)n Simple_repeat Simple_repeat 5 171 0 9 686 638 26 0 0 chrUextra 13344125 13344203 -15660453 - ROVER-LTR_DM LTR Gypsy 0 367 290 9 686 267 0 0 0 chrUextra 13344311 13344343 -15660313 - DOC3_DM LINE Jockey -1704 3036 3005 9 686 2588 36 9 3 chrUextra 13344342 13344673 -15659983 - DOC3_DM LINE Jockey -1886 2854 2522 9 686 2992 34 16 0 chrUextra 13344661 13345041 -15659615 - DOC3_DM LINE Jockey -2439 2301 1916 9 686 3256 162 15 16 chrUextra 13345142 13345871 -15658785 + SAR_DM Satellite Satellite 293 1020 -452 9 686 21 89 0 0 chrUextra 13346077 13346133 -15658523 + AT_rich Low_complexity Low_complexity 1 56 0 9 686 29 47 0 0 chrUextra 13346171 13346214 -15658442 + AT_rich Low_complexity Low_complexity 1 43 0 9 686 27 81 0 0 chrUextra 13346260 13346322 -15658334 + AT_rich Low_complexity Low_complexity 1 62 0 9 686 236 0 0 0 chrUextra 13346671 13346701 -15657955 - PROTOP_B DNA P 0 1153 1124 9 686 5419 34 60 1 chrUextra 13346801 13347529 -15657127 + R1_DM LINE R1 460 1230 -4126 9 686 553 171 0 23 chrUextra 13347631 13347763 -15656893 - ARS406_DM Unknown Unknown -224 129 1 9 686 2848 178 27 13 chrUextra 13347665 13348360 -15656296 + SAR_DM Satellite Satellite 191 895 -577 9 686 2004 0 0 0 chrUextra 13348461 13348691 -15655965 - DMRT1B LINE R1 -4953 230 1 9 686 1510 107 11 0 chrUextra 13348920 13349191 -15655465 - TART_B1 LINE telomeric -8410 2244 1971 9 686 6218 3 1 1 chrUextra 13349291 13350021 -15654635 - LSU-rRNA_Dme rRNA rRNA -2565 1335 606 9 686 1167 7 0 0 chrUextra 13350361 13350496 -15654160 - 5S_DM RNA RNA 0 135 1 9 686 1080 0 0 0 chrUextra 13350727 13350851 -15653805 - 5S_DM RNA RNA 0 135 12 9 686 3028 0 3 0 chrUextra 13351335 13351681 -15652975 - SSU-rRNA_Dme rRNA rRNA 0 1995 1649 9 686 2951 195 8 8 chrUextra 13351781 13352505 -15652151 - SAR_DM Satellite Satellite -554 918 195 9 686 5894 21 11 7 chrUextra 13352611 13353341 -15651315 + FW_DM LINE Jockey 1987 2719 -1973 9 686 6227 7 0 0 chrUextra 13353441 13354171 -15650485 - R1_DM LINE R1 -2505 2851 2122 9 686 6227 1 0 0 chrUextra 13354271 13355001 -15649655 + BLOOD_I LTR Gypsy 2450 3179 -3434 9 686 6148 0 0 0 chrUextra 13355101 13355831 -15648825 - BLOOD_I LTR Gypsy -330 6283 5554 9 686 2221 105 41 27 chrUextra 13355949 13356661 -15647995 + DMSAT6 Satellite Satellite 1 721 0 9 686 5920 19 6 3 chrUextra 13356761 13357491 -15647165 - ROO_I LTR Pao -5213 3043 2312 9 686 250 33 0 0 chrUextra 13357747 13357777 -15646879 + Baggins1 LINE LOA 4727 4756 -697 9 686 693 103 241 0 chrUextra 13357785 13357930 -15646726 + FB4_DM DNA Tc1 3908 4087 -2 9 686 5938 6 1 0 chrUextra 13359257 13359976 -15644680 + QUASIMODO_I LTR Gypsy 1120 1839 -4221 9 686 5960 14 0 0 chrUextra 13360078 13360807 -15643849 + STALKER4_I LTR Gypsy 4647 5375 -1155 9 686 6182 3 0 0 chrUextra 13360907 13361636 -15643020 + ROO_I LTR Pao 1576 2304 -5952 9 686 27 29 0 0 chrUextra 13361894 13361928 -15642728 + AT_rich Low_complexity Low_complexity 1 34 0 9 686 250 33 0 0 chrUextra 13362167 13362197 -15642459 + Baggins1 LINE LOA 4727 4756 -697 9 686 693 103 241 0 chrUextra 13362205 13362350 -15642306 + FB4_DM DNA Tc1 3908 4087 -2 9 686 6229 3 1 3 chrUextra 13362565 13363294 -15641362 - LSU-rRNA_Dme rRNA rRNA -2315 1585 858 9 686 374 226 22 108 chrUextra 13363461 13363600 -15641056 - Gypsy12_LTR LTR Gypsy -1808 528 402 9 686 843 136 141 37 chrUextra 13363603 13363794 -15640862 - Gypsy12_LTR LTR Gypsy -2125 211 1 9 686 1660 78 106 3 chrUextra 13363793 13364123 -15640533 - Gypsy12_I LTR Gypsy 0 5546 5183 9 686 893 180 80 90 chrUextra 13364361 13364673 -15639983 + TIRANT_LTR LTR Gypsy 1 309 -108 9 686 5890 32 0 1 chrUextra 13365052 13365781 -15638875 - MDG1_I LTR Gypsy -2239 4357 3630 9 686 225 127 30 45 chrUextra 13365881 13365947 -15638709 + XDMR_DM Unknown Unknown 296 360 0 9 686 3086 170 11 13 chrUextra 13365912 13366610 -15638046 - SAR_DM Satellite Satellite -396 1076 380 9 686 4133 4 0 0 chrUextra 13366710 13367187 -15637469 - BARI_DM DNA Tc1 -755 973 497 9 686 1178 0 0 0 chrUextra 13367185 13367320 -15637336 - BARI_DM DNA Tc1 -1590 138 4 9 686 980 0 8 0 chrUextra 13367320 13367439 -15637217 - BARI_DM DNA Tc1 -1 1727 1608 9 686 5959 18 25 0 chrUextra 13367540 13368268 -15636388 + R1_DM LINE R1 1744 2489 -2867 9 686 6068 3 1 1 chrUextra 13368368 13369097 -15635559 + STALKER4_I LTR Gypsy 5445 6173 -357 9 85 5384 58 4 4 chrUextra 13369197 13369926 -15634730 - R1_DM LINE R1 -4623 733 5 9 687 4745 62 15 8 chrUextra 13370026 13370741 -15633915 - R1_DM LINE R1 -1091 4265 3681 9 687 6205 10 0 1 chrUextra 13370855 13371584 -15633072 - Gypsy4_I LTR Gypsy -4149 2139 1412 9 687 6333 1 0 0 chrUextra 13371684 13372413 -15632243 + FW_DM LINE Jockey 3613 4341 -351 9 687 2174 163 42 14 chrUextra 13372513 13373012 -15631644 + SAR_DM Satellite Satellite 391 903 -569 9 687 1006 95 0 0 chrUextra 13373019 13373177 -15631479 - ARS406_DM Unknown Unknown -195 158 1 9 687 863 210 0 5 chrUextra 13373027 13373242 -15631414 + SAR_DM Satellite Satellite 496 709 -763 9 687 6279 1 0 0 chrUextra 13373342 13374071 -15630585 - R1_DM LINE R1 -2076 3280 2552 9 687 2684 210 31 15 chrUextra 13374171 13374896 -15629760 - SAR_DM Satellite Satellite -593 736 1 9 687 6256 3 1 0 chrUextra 13375000 13375729 -15628927 + MDG3_I LTR Gypsy 1038 1767 -3219 9 687 5750 19 37 0 chrUextra 13375829 13376558 -15628098 - STALKER4_I LTR Gypsy -3458 3072 2317 9 687 870 177 10 10 chrUextra 13376658 13376858 -15627798 + SAR_DM Satellite Satellite 333 532 -940 9 687 2303 80 32 20 chrUextra 13376864 13377280 -15627376 - Gypsy6A_LTR LTR Gypsy 0 420 1 9 687 916 0 0 0 chrUextra 13377282 13377387 -15627269 - Gypsy6_I LTR Gypsy 0 7012 6908 9 687 3384 174 6 6 chrUextra 13377487 13378215 -15626441 + SAR_DM Satellite Satellite 334 1061 -411 9 687 6054 10 0 0 chrUextra 13378316 13379045 -15625611 - STALKER4_I LTR Gypsy -3906 2624 1896 9 687 4121 113 7 36 chrUextra 13379159 13379874 -15624782 + TART LINE telomeric 5323 6016 -8461 9 687 2818 176 25 23 chrUextra 13379975 13380702 -15623954 - SAR_DM Satellite Satellite -371 1101 374 9 687 6103 6 0 0 chrUextra 13380803 13381532 -15623124 + STALKER4_I LTR Gypsy 4705 5433 -1097 9 687 5963 23 1 0 chrUextra 13381632 13382361 -15622295 - R1_DM LINE R1 -1707 3649 2920 9 687 3648 110 28 62 chrUextra 13382461 13383170 -15621486 - HETA LINE telomeric -4987 1094 410 9 687 6381 3 0 0 chrUextra 13383290 13384019 -15620637 - SSU-rRNA_Dme rRNA rRNA -1003 992 264 9 687 4622 16 15 1 chrUextra 13384119 13384847 -15619809 + TAHRE LINE telomeric 8436 9492 -971 9 687 606 14 0 0 chrUextra 13384948 13385021 -15619635 - NTS_DM Other Other -130 110 38 9 687 817 0 0 0 chrUextra 13385021 13385117 -15619539 - NTS_DM Other Other -107 133 38 9 687 832 9 9 27 chrUextra 13385117 13385228 -15619428 - NTS_DM Other Other -107 133 25 9 687 21 57 0 0 chrUextra 13385254 13385289 -15619367 + AT_rich Low_complexity Low_complexity 1 35 0 9 687 1252 18 0 6 chrUextra 13385289 13385454 -15619202 - NTS_DM Other Other -39 201 38 9 687 852 18 0 27 chrUextra 13385454 13385566 -15619090 - NTS_DM Other Other -107 133 25 9 687 385 35 0 17 chrUextra 13385618 13385677 -15618979 - NTS_DM Other Other -39 201 144 9 687 5981 15 0 1 chrUextra 13385793 13386506 -15618150 + Gypsy4_I LTR Gypsy 374 1085 -5203 9 687 753 10 10 30 chrUextra 13386606 13386707 -15617949 - NTS_DM Other Other -117 123 25 9 687 21 57 0 0 chrUextra 13386733 13386768 -15617888 + AT_rich Low_complexity Low_complexity 1 35 0 9 687 1252 18 0 6 chrUextra 13386768 13386933 -15617723 - NTS_DM Other Other -39 201 38 9 687 870 9 0 27 chrUextra 13386933 13387045 -15617611 - NTS_DM Other Other -107 133 25 9 687 1252 18 0 6 chrUextra 13387097 13387262 -15617394 - NTS_DM Other Other -39 201 38 9 687 506 14 27 0 chrUextra 13387262 13387335 -15617321 - NTS_DM Other Other -107 133 59 9 687 5294 8 2 0 chrUextra 13387435 13388055 -15616601 - DM1731_I LTR Copia -3355 621 1 9 687 829 55 0 0 chrUextra 13388055 13388164 -15616492 - DM1731_LTR LTR Copia 0 336 228 9 687 32 0 0 0 chrUextra 13388399 13388431 -15616225 + AT_rich Low_complexity Low_complexity 1 32 0 9 687 28 48 0 0 chrUextra 13388759 13388801 -15615855 + AT_rich Low_complexity Low_complexity 1 42 0 9 687 4633 93 1 3 chrUextra 13389093 13389801 -15614855 + BATUMI_I LTR Pao 3782 4564 -3350 9 687 294 26 26 0 chrUextra 13389784 13389822 -15614834 + BATUMI_I LTR Pao 4315 4353 -3610 9 687 6557 3 0 0 chrUextra 13389922 13390651 -15614005 - DOC LINE Jockey -1619 3106 2378 9 687 3846 0 2 0 chrUextra 13390751 13391180 -15613476 + DOC LINE Jockey 1005 1434 -3291 9 687 1032 0 0 20 chrUextra 13391194 13391343 -15613313 + DOC LINE Jockey 4580 4725 0 9 687 893 30 22 15 chrUextra 13391344 13391480 -15613176 - STALKER4_I LTR Gypsy -195 6335 6199 9 687 201 121 0 0 chrUextra 13391757 13391790 -15612866 + (TC)n Simple_repeat Simple_repeat 1 33 0 9 687 1552 11 0 26 chrUextra 13392409 13392599 -15612057 + DM1731_I LTR Copia 3792 3976 0 9 687 2802 36 0 0 chrUextra 13392599 13392935 -15611721 + DM1731_LTR LTR Copia 1 336 0 9 687 1232 94 128 24 chrUextra 13392935 13393138 -15611518 + PROTOP DNA P 503 731 -3749 9 687 1343 112 51 17 chrUextra 13393238 13393474 -15611182 - MDG1_I LTR Gypsy -6352 244 1 9 687 1954 97 74 3 chrUextra 13393474 13393772 -15610884 - MDG1_LTR LTR Gypsy -30 412 94 9 687 339 105 0 0 chrUextra 13393774 13393831 -15610825 + (TTA)n Simple_repeat Simple_repeat 3 59 0 9 687 666 86 76 0 chrUextra 13393858 13393963 -15610693 + DM176_I LTR Gypsy 2360 2472 -3948 9 687 2515 0 4 0 chrUextra 13394520 13394796 -15609860 - SSU-rRNA_Dme rRNA rRNA 0 1995 1719 9 687 1840 21 17 13 chrUextra 13394911 13395150 -15609506 + NTS_DM Other Other 1 240 0 9 687 1926 4 17 13 chrUextra 13395150 13395389 -15609267 + NTS_DM Other Other 1 240 0 9 687 1337 12 0 18 chrUextra 13395389 13395554 -15609102 + NTS_DM Other Other 1 162 -78 9 687 711 122 0 0 chrUextra 13395725 13395832 -15608824 + DM176_I LTR Gypsy 6314 6420 0 9 687 255 215 11 151 chrUextra 13395888 13395981 -15608675 + DM176_LTR LTR Gypsy 190 269 -238 9 687 273 191 59 0 chrUextra 13396090 13396158 -15608498 + DM176_LTR LTR Gypsy 295 366 -141 9 687 608 148 40 16 chrUextra 13396175 13396299 -15608357 + DMTOM1_LTR LTR Gypsy 284 410 0 9 687 377 103 14 29 chrUextra 13396299 13396360 -15608296 + DMTOM1_LTR LTR Gypsy 349 408 -2 9 687 534 15 0 0 chrUextra 13396389 13396454 -15608202 - QUASIMODO_LTR LTR Gypsy 0 658 594 9 687 360 100 17 0 chrUextra 13396554 13396614 -15608042 - ARS406_DM Unknown Unknown -292 61 1 9 687 3314 183 4 6 chrUextra 13396574 13397267 -15607389 + SAR_DM Satellite Satellite 246 937 -535 9 687 1077 43 0 0 chrUextra 13397144 13397283 -15607373 - ARS406_DM Unknown Unknown -164 189 51 9 687 5667 33 0 0 chrUextra 13397420 13398112 -15606544 + IDEFIX_I LTR Gypsy 1 692 -4936 9 687 4831 7 0 0 chrUextra 13398215 13398762 -15605894 + FW_DM LINE Jockey 4143 4689 -3 9 687 278 139 66 0 chrUextra 13398787 13398938 -15605718 + T-rich Low_complexity Low_complexity 5 165 0 9 687 1725 0 0 0 chrUextra 13399041 13399228 -15605428 + SSU-rRNA_Dme rRNA rRNA 1809 1995 0 9 687 21 89 0 0 chrUextra 13399247 13399303 -15605353 + AT_rich Low_complexity Low_complexity 1 56 0 9 687 6469 6 18 1 chrUextra 13399870 13400599 -15604057 - MDG3_I LTR Gypsy -3663 1323 583 9 687 505 333 18 18 chrUextra 13400712 13400935 -15603721 + Gypsy12_I LTR Gypsy 3147 3369 -2177 9 687 4377 44 17 53 chrUextra 13400778 13401378 -15603278 + CIRCE LINE Composite 1305 1882 -4474 9 687 22 35 0 0 chrUextra 13401632 13401661 -15602995 + AT_rich Low_complexity Low_complexity 1 29 0 9 687 35 41 0 0 chrUextra 13401762 13401811 -15602845 + AT_rich Low_complexity Low_complexity 1 49 0 9 687 28 48 0 0 chrUextra 13402166 13402208 -15602448 + AT_rich Low_complexity Low_complexity 1 42 0 9 687 4629 12 2 0 chrUextra 13402357 13402873 -15601783 - Invader1_I LTR Gypsy -2669 517 1 9 687 1900 14 0 0 chrUextra 13402873 13403086 -15601570 - Invader1_LTR LTR Gypsy 0 423 211 9 687 3240 182 10 11 chrUextra 13403186 13403915 -15600741 + SAR_DM Satellite Satellite 256 983 -489 9 687 4031 18 15 1 chrUextra 13404018 13404744 -15599912 + PROTOP_A DNA P 145 928 -177 9 687 21 0 0 0 chrUextra 13404868 13404889 -15599767 + AT_rich Low_complexity Low_complexity 1 21 0 9 687 6553 3 1 0 chrUextra 13406502 13407231 -15597425 + DOC LINE Jockey 2952 3681 -1044 9 687 3686 198 1 1 chrUextra 13407333 13408058 -15596598 + ROVER-I_DM LTR Gypsy 2963 3687 -2897 9 687 368 0 68 51 chrUextra 13408160 13408219 -15596437 + NTS_DM Other Other 181 240 0 9 687 1345 6 0 18 chrUextra 13408219 13408384 -15596272 + NTS_DM Other Other 1 162 -78 9 687 514 119 36 0 chrUextra 13408494 13408578 -15596078 + NTS_DM Other Other 4 90 -150 9 687 25 51 0 0 chrUextra 13408850 13408889 -15595767 + AT_rich Low_complexity Low_complexity 1 39 0 9 687 4001 65 32 22 chrUextra 13408989 13409717 -15594939 - PROTOP_A DNA P -27 1126 395 9 687 6445 0 1 0 chrUextra 13409818 13410547 -15594109 + LSU-rRNA_Dme rRNA rRNA 362 1091 -2809 9 687 2393 88 34 21 chrUextra 13410647 13411039 -15593617 + Gypsy6A_LTR LTR Gypsy 25 420 0 9 687 2127 46 27 101 chrUextra 13411039 13411376 -15593280 + Gypsy6_I LTR Gypsy 1 312 -6700 9 687 6458 3 1 1 chrUextra 13411476 13412205 -15592451 - R1_DM LINE R1 -3672 1684 956 9 687 524 126 0 11 chrUextra 13412634 13412722 -15591934 + G3_DM LINE Jockey 103 189 -4416 9 687 241 169 117 17 chrUextra 13412713 13412773 -15591883 + G3_DM LINE Jockey 364 429 -4176 9 687 384 138 92 0 chrUextra 13412817 13412882 -15591774 + G3_DM LINE Jockey 509 579 -4026 9 687 6507 7 0 0 chrUextra 13413134 13413863 -15590793 - Invader2_I LTR Gypsy -3145 1447 719 9 687 3133 187 16 21 chrUextra 13413964 13414688 -15589968 - SAR_DM Satellite Satellite -610 720 1 9 687 3192 174 14 19 chrUextra 13414793 13415491 -15589165 - SAR_DM Satellite Satellite -593 879 185 9 687 704 173 0 0 chrUextra 13415388 13415521 -15589135 + ARS406_DM Unknown Unknown 1 133 -220 9 687 4532 95 6 9 chrUextra 13415621 13416350 -15588306 - BATUMI_I LTR Pao -2834 5080 4281 9 687 6076 21 6 7 chrUextra 13416451 13417179 -15587477 - DMRT1B LINE R1 -350 4833 4107 9 687 6114 1 0 0 chrUextra 13417279 13417944 -15586712 - SSU-rRNA_Dme rRNA rRNA -1330 665 1 9 687 6488 16 0 0 chrUextra 13418108 13418837 -15585819 + Gypsy6_I LTR Gypsy 6140 6868 -144 9 687 3140 172 27 18 chrUextra 13418937 13419647 -15585009 + SAR_DM Satellite Satellite 404 1119 -353 9 687 327 214 29 19 chrUextra 13419561 13419666 -15584990 - XDMR_DM Unknown Unknown 0 360 255 9 687 6430 3 0 0 chrUextra 13419766 13420495 -15584161 - DM176_I LTR Gypsy -906 5514 4786 9 687 2870 264 4 4 chrUextra 13420595 13421324 -15583332 - TIRANT_I LTR Gypsy -3547 4145 3417 9 687 6430 4 0 0 chrUextra 13421424 13422153 -15582503 + STALKER4_I LTR Gypsy 4558 5286 -1244 9 687 6631 0 1 1 chrUextra 13422253 13422982 -15581674 - SSU-rRNA_Dme rRNA rRNA -1040 955 227 9 687 5305 0 0 0 chrUextra 13423082 13423675 -15580981 + BARI_DM DNA Tc1 1135 1727 -1 9 687 1238 0 0 0 chrUextra 13423675 13423811 -15580845 + BARI_DM DNA Tc1 4 139 -1589 9 687 6383 12 0 1 chrUextra 13423911 13424640 -15580016 - Copia2_I LTR Copia -2362 1800 1073 9 687 2578 36 3 0 chrUextra 13425148 13425456 -15579200 - PROTOP DNA P 0 4480 4172 9 687 6277 4 1 0 chrUextra 13425569 13426298 -15578358 + DM176_I LTR Gypsy 1664 2393 -4027 9 687 1492 292 8 6 chrUextra 13426605 13427119 -15577537 + ROVER-I_DM LTR Gypsy 507 1360 -5224 9 687 6510 0 0 0 chrUextra 13427227 13427956 -15576700 - DM176_I LTR Gypsy -716 5704 4976 9 687 6441 0 0 1 chrUextra 13428058 13428785 -15575871 + ROO_I LTR Pao 2565 3290 -4966 9 687 1962 164 15 2 chrUextra 13428885 13429288 -15575368 - SAR_DM Satellite Satellite -677 795 388 9 687 1361 182 22 6 chrUextra 13429299 13429614 -15575042 - SAR_DM Satellite Satellite -672 800 481 9 687 6505 0 0 0 chrUextra 13429714 13430443 -15574213 + STALKER4_I LTR Gypsy 4538 5266 -1264 9 687 6420 1 1 0 chrUextra 13430543 13431272 -15573384 - DM176_I LTR Gypsy -3610 2810 2081 9 687 1479 272 25 24 chrUextra 13431374 13432098 -15572558 - STALKER4_I LTR Gypsy -2920 3610 2886 9 687 6006 1 0 36 chrUextra 13432201 13432929 -15571727 - LSU-rRNA_Dme rRNA rRNA -3183 717 16 9 687 364 315 36 36 chrUextra 13433033 13433254 -15571402 - DM1731_I LTR Copia -2370 1606 1386 9 687 2703 98 8 19 chrUextra 13433867 13434588 -15570068 + DMSAT6 Satellite Satellite 1 712 0 9 687 4450 114 105 0 chrUextra 13434691 13435417 -15569239 + TART_B1 LINE telomeric 5424 6225 -4429 9 687 6576 3 0 0 chrUextra 13436346 13437075 -15567581 - R1_DM LINE R1 -2369 2987 2259 9 687 4599 23 84 0 chrUextra 13437175 13437904 -15566752 + FW_DM LINE Jockey 2985 3774 -918 9 687 3256 170 31 15 chrUextra 13438004 13438733 -15565923 + SAR_DM Satellite Satellite 1 740 -411 9 687 999 301 30 38 chrUextra 13438838 13439553 -15565103 - SAR_DM Satellite Satellite -695 709 1 9 687 3528 176 7 8 chrUextra 13439662 13440391 -15564265 + SAR_DM Satellite Satellite 287 1014 -458 9 687 3372 161 11 25 chrUextra 13441325 13442049 -15562607 - SAR_DM Satellite Satellite -382 1090 377 9 687 4648 28 0 0 chrUextra 13442164 13442707 -15561949 - R1_DM LINE R1 -1890 3466 2924 9 687 1511 22 0 0 chrUextra 13442699 13442877 -15561779 - R1_DM LINE R1 -2544 2812 2635 9 687 2319 34 91 3 chrUextra 13442978 13443275 -15561381 - DMCR1A LINE CR1 -429 4041 3719 9 687 831 77 112 7 chrUextra 13443276 13443419 -15561237 + HMSBEAGLE_I LTR Gypsy 4755 4912 -1617 9 687 6100 10 1 1 chrUextra 13443807 13444536 -15560120 - R1_DM LINE R1 -1250 4106 3378 9 687 1227 0 7 0 chrUextra 13445465 13445609 -15559047 - SSU-rRNA_Dme rRNA rRNA -1850 145 1 9 687 32 0 0 0 chrUextra 13445741 13445773 -15558883 + AT_rich Low_complexity Low_complexity 1 32 0 9 687 28 48 0 0 chrUextra 13446101 13446143 -15558513 + AT_rich Low_complexity Low_complexity 1 42 0 9 687 6309 1 0 1 chrUextra 13446294 13447023 -15557633 + FW_DM LINE Jockey 1799 2526 -2166 9 687 5045 103 0 0 chrUextra 13447123 13447850 -15556806 - HMSBEAGLE_I LTR Gypsy -1034 5495 4769 9 687 5938 3 0 0 chrUextra 13447952 13448681 -15555975 - DM176_I LTR Gypsy -360 6060 5332 9 687 2831 195 15 18 chrUextra 13448783 13449510 -15555146 - SAR_DM Satellite Satellite -291 1181 457 9 687 6213 4 18 0 chrUextra 13449610 13450339 -15554317 + Gypsy4_I LTR Gypsy 1997 2738 -3550 9 687 5875 37 0 6 chrUextra 13450439 13451168 -15553488 + BATUMI_I LTR Pao 5308 6032 -1931 9 687 6248 6 0 0 chrUextra 13451268 13451997 -15552659 - R1_DM LINE R1 -1582 3774 3046 9 687 3025 213 15 5 chrUextra 13452926 13453655 -15551001 - ROVER-I_DM LTR Gypsy -3145 3439 2840 9 687 1844 168 179 29 chrUextra 13453755 13454484 -15550172 + HETA LINE telomeric 5198 5723 -358 9 687 6374 0 3 0 chrUextra 13454584 13455313 -15549343 + LSU-rRNA_Dme rRNA rRNA 2884 3614 -286 9 687 5988 6 15 1 chrUextra 13455413 13456142 -15548514 + R1_DM LINE R1 630 1368 -3988 9 687 3588 9 2 0 chrUextra 13456242 13456662 -15547994 + Invader1_LTR LTR Gypsy 3 423 0 9 687 2689 7 0 0 chrUextra 13456662 13456971 -15547685 + Invader1_I LTR Gypsy 1 309 -2877 9 687 1620 13 0 0 chrUextra 13457071 13457299 -15547357 + (CACAA)n Simple_repeat Simple_repeat 1 228 0 9 687 3904 9 0 0 chrUextra 13457335 13457800 -15546856 + DMRT1B LINE R1 331 795 -4388 9 687 2300 18 4 0 chrUextra 13457900 13458176 -15546480 - Copia2_I LTR Copia -769 3393 3117 9 687 22 35 0 0 chrUextra 13458210 13458239 -15546417 + AT_rich Low_complexity Low_complexity 1 29 0 9 687 51 31 0 0 chrUextra 13458414 13458479 -15546177 + AT_rich Low_complexity Low_complexity 1 65 0 9 687 3153 180 10 8 chrUextra 13458732 13459456 -15545200 + SAR_DM Satellite Satellite 282 1006 -466 9 687 1252 18 0 6 chrUextra 13459604 13459769 -15544887 - NTS_DM Other Other -39 201 38 9 687 870 9 0 27 chrUextra 13459769 13459881 -15544775 - NTS_DM Other Other -107 133 25 9 687 22 56 0 0 chrUextra 13459907 13459943 -15544713 + AT_rich Low_complexity Low_complexity 1 36 0 9 687 230 150 0 0 chrUextra 13459956 13459996 -15544660 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 687 246 150 0 0 chrUextra 13460039 13460079 -15544577 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 687 246 150 0 0 chrUextra 13460131 13460171 -15544485 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 687 246 150 0 0 chrUextra 13460223 13460263 -15544393 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 687 6358 3 0 0 chrUextra 13462043 13462769 -15541887 - LINEJ1_DM LINE Jockey -134 4886 4161 9 687 23 68 0 0 chrUextra 13462885 13462929 -15541727 + AT_rich Low_complexity Low_complexity 1 44 0 9 687 26 30 0 0 chrUextra 13462975 13463008 -15541648 + AT_rich Low_complexity Low_complexity 1 33 0 9 687 1740 38 0 0 chrUextra 13463386 13463597 -15541059 - PROTOP_B DNA P 0 1153 943 9 687 656 181 0 0 chrUextra 13463697 13463830 -15540826 - ARS406_DM Unknown Unknown -220 133 1 9 687 2760 180 36 20 chrUextra 13463727 13464423 -15540233 + SAR_DM Satellite Satellite 185 891 -581 9 687 1091 67 127 0 chrUextra 13464525 13464690 -15539966 + TART LINE telomeric 1674 1859 -12618 9 687 4397 45 5 0 chrUextra 13464681 13465253 -15539403 + TART LINE telomeric 2045 2619 -11858 9 687 6235 0 3 4 chrUextra 13465353 13466081 -15538575 + SSU-rRNA_Dme rRNA rRNA 1062 1788 -207 9 687 6211 0 0 3 chrUextra 13466181 13466909 -15537747 + DOC LINE Jockey 2880 3605 -1120 9 687 6232 0 0 1 chrUextra 13467009 13467737 -15536919 + LSU-rRNA_Dme rRNA rRNA 526 1252 -2648 9 687 1069 115 138 5 chrUextra 13468121 13468331 -15536325 - DNAREP1_DM LINE Penelope -356 238 1 9 687 2700 9 3 0 chrUextra 13468689 13469009 -15535647 + MAX_LTR LTR Pao 1 321 0 9 687 3172 3 0 0 chrUextra 13469027 13469393 -15535263 - MAX_I LTR Pao -2378 5536 5171 9 687 224 0 0 162 chrUextra 13469962 13470172 -15534484 + (TTATG)n Simple_repeat Simple_repeat 4 179 0 9 687 1021 89 0 0 chrUextra 13470324 13470482 -15534174 + ARS406_DM Unknown Unknown 1 158 -195 9 687 2702 159 9 7 chrUextra 13470489 13471046 -15533610 - SAR_DM Satellite Satellite -569 903 346 9 687 4198 2 2 10 chrUextra 13471149 13471653 -15533003 + LSU-rRNA_Dme rRNA rRNA 3401 3900 0 9 687 22 56 0 0 chrUextra 13471725 13471761 -15532895 + AT_rich Low_complexity Low_complexity 1 36 0 9 687 246 150 0 0 chrUextra 13471766 13471806 -15532850 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 687 677 213 0 7 chrUextra 13472146 13472288 -15532368 - HETRP_DM Satellite Satellite -203 1669 1529 9 687 689 206 0 7 chrUextra 13472455 13472597 -15532059 - HETRP_DM Satellite Satellite -203 1669 1529 9 687 5064 64 18 3 chrUextra 13472811 13473520 -15531136 - QUASIMODO_I LTR Gypsy -5311 749 30 9 687 6110 14 0 0 chrUextra 13473633 13474361 -15530295 - Invader3_I LTR Gypsy -1414 3474 2747 9 687 5781 41 1 0 chrUextra 13474462 13475189 -15529467 + BATUMI_I LTR Pao 4406 5133 -2830 9 687 1397 22 0 6 chrUextra 13475289 13475469 -15529187 - NTS_DM Other Other -61 179 1 9 687 1391 25 20 20 chrUextra 13475469 13475672 -15528984 - NTS_DM Other Other 0 240 38 9 687 817 0 0 0 chrUextra 13475672 13475768 -15528888 - NTS_DM Other Other -107 133 38 9 687 832 9 9 27 chrUextra 13475768 13475879 -15528777 - NTS_DM Other Other -107 133 25 9 687 21 57 0 0 chrUextra 13475905 13475940 -15528716 + AT_rich Low_complexity Low_complexity 1 35 0 9 687 473 40 0 13 chrUextra 13475940 13476017 -15528639 - NTS_DM Other Other -39 201 126 9 687 5356 45 19 0 chrUextra 13476117 13476845 -15527811 - R1_DM LINE R1 -4303 1053 312 9 687 3203 183 8 8 chrUextra 13476945 13477673 -15526983 - SAR_DM Satellite Satellite -489 983 256 9 687 1488 54 0 4 chrUextra 13477773 13478501 -15526155 + (ATAAG)n Simple_repeat Simple_repeat 1 725 0 9 687 6248 3 0 0 chrUextra 13478601 13479329 -15525327 - ROO_I LTR Pao -337 7919 7192 9 687 3194 171 10 10 chrUextra 13479432 13480146 -15524510 - SAR_DM Satellite Satellite -535 937 224 9 687 468 84 0 0 chrUextra 13480084 13480155 -15524501 + ARS406_DM Unknown Unknown 1 71 -282 9 687 6015 21 0 1 chrUextra 13480257 13480985 -15523671 + R1_DM LINE R1 1951 2677 -2679 9 687 2819 187 26 25 chrUextra 13481089 13481810 -15522846 + SAR_DM Satellite Satellite 1 721 -224 9 687 409 0 0 56 chrUextra 13481913 13481967 -15522689 - NTS_DM Other Other -165 75 25 9 687 22 56 0 0 chrUextra 13481993 13482029 -15522627 + AT_rich Low_complexity Low_complexity 1 36 0 9 687 4699 2 2 0 chrUextra 13482102 13482641 -15522015 - LSU-rRNA_Dme rRNA rRNA 0 3900 3361 9 687 6308 0 1 3 chrUextra 13483569 13484297 -15520359 - SSU-rRNA_Dme rRNA rRNA -27 1968 1242 9 687 487 47 129 0 chrUextra 13484444 13484529 -15520127 + MAX_I LTR Pao 820 915 -6999 9 687 4579 36 0 5 chrUextra 13484546 13485125 -15519531 + MAX_I LTR Pao 2502 3077 -4837 9 687 6324 0 0 0 chrUextra 13485225 13485953 -15518703 - DMRT1B LINE R1 -2574 2609 1882 9 687 6371 1 1 0 chrUextra 13486053 13486781 -15517875 - LSU-rRNA_Dme rRNA rRNA -199 3701 2973 9 687 47 0 0 0 chrUextra 13487308 13487355 -15517301 + AT_rich Low_complexity Low_complexity 1 47 0 9 687 6086 11 0 0 chrUextra 13487709 13488437 -15516219 + IDEFIX_I LTR Gypsy 971 1698 -3930 9 687 326 43 0 60 chrUextra 13488537 13488587 -15516069 - NTS_DM Other Other -169 71 25 9 687 1252 18 0 6 chrUextra 13488639 13488804 -15515852 - NTS_DM Other Other -39 201 38 9 687 870 9 0 27 chrUextra 13488804 13488916 -15515740 - NTS_DM Other Other -107 133 25 9 687 22 56 0 0 chrUextra 13488942 13488978 -15515678 + AT_rich Low_complexity Low_complexity 1 36 0 9 687 255 125 0 0 chrUextra 13488991 13489031 -15515625 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 687 246 150 0 0 chrUextra 13489074 13489114 -15515542 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 687 246 150 0 0 chrUextra 13489166 13489206 -15515450 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 687 2345 104 14 21 chrUextra 13489365 13490072 -15514584 - DMSAT6 Satellite Satellite -98 701 1 9 687 6353 3 1 0 chrUextra 13490193 13490921 -15513735 - LSU-rRNA_Dme rRNA rRNA -168 3732 3004 9 687 6319 0 0 1 chrUextra 13491021 13491749 -15512907 - QUASIMODO_I LTR Gypsy -5326 734 8 9 687 5299 29 45 1 chrUextra 13491849 13492577 -15512079 - QUASIMODO_I LTR Gypsy -4522 1538 779 9 687 6078 0 3 3 chrUextra 13492677 13493405 -15511251 + BURDOCK_I LTR Gypsy 4602 5329 -531 9 687 1771 319 6 7 chrUextra 13493524 13494232 -15510424 - GTWIN_I LTR Gypsy -2779 3642 2936 9 687 5832 23 26 0 chrUextra 13494333 13495061 -15509595 + FW_DM LINE Jockey 3106 3852 -840 9 687 507 182 0 0 chrUextra 13495162 13495288 -15509368 + (TTATG)n Simple_repeat Simple_repeat 4 129 0 9 687 3282 164 11 11 chrUextra 13495994 13496716 -15507940 - SAR_DM Satellite Satellite -425 1047 326 9 687 3375 160 10 8 chrUextra 13496817 13497528 -15507128 - SAR_DM Satellite Satellite -435 1037 326 9 687 6252 0 0 0 chrUextra 13497645 13498373 -15506283 + BLOOD_I LTR Gypsy 1739 2466 -4147 9 687 5847 15 1 0 chrUextra 13498473 13499201 -15505455 + STALKER4_I LTR Gypsy 2683 3411 -3119 9 687 6129 0 0 0 chrUextra 13499301 13499998 -15504658 + NOMAD_I LTR Gypsy 953 1649 -4923 9 687 256 0 0 0 chrUextra 13500000 13500029 -15504627 + NOMAD_I LTR Gypsy 1652 1680 -4892 9 687 501 25 0 0 chrUextra 13500129 13500208 -15504448 + FW_DM LINE Jockey 4610 4688 -4 9 85 5004 43 1 1 chrUextra 13500209 13500857 -15503799 - R1_DM LINE R1 -3966 1390 743 9 688 4115 58 0 12 chrUextra 13500957 13501551 -15503105 + MDG1_I LTR Gypsy 5618 6204 -392 9 688 372 97 127 16 chrUextra 13501544 13501670 -15502986 + MDG1_I LTR Gypsy 6395 6534 -62 9 688 3461 148 96 6 chrUextra 13501785 13502511 -15502145 + IDEFIX_I LTR Gypsy 3071 3862 -1766 9 688 854 9 0 0 chrUextra 13502613 13502718 -15501938 - NTS_DM Other Other -98 142 38 9 688 870 9 0 27 chrUextra 13502718 13502830 -15501826 - NTS_DM Other Other -107 133 25 9 688 1252 18 0 6 chrUextra 13502882 13503047 -15501609 - NTS_DM Other Other -39 201 38 9 688 870 9 0 27 chrUextra 13503047 13503159 -15501497 - NTS_DM Other Other -107 133 25 9 688 22 56 0 0 chrUextra 13503185 13503221 -15501435 + AT_rich Low_complexity Low_complexity 1 36 0 9 688 243 125 0 0 chrUextra 13503234 13503274 -15501382 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 688 549 35 0 158 chrUextra 13503441 13503542 -15501114 - MAX_I LTR Pao -7829 85 1 9 688 1705 120 70 0 chrUextra 13503542 13503842 -15500814 - MAX_LTR LTR Pao 0 321 1 9 688 1297 198 6 12 chrUextra 13503842 13504169 -15500487 - SAR_DM Satellite Satellite -484 988 664 9 688 2925 158 30 23 chrUextra 13504271 13504997 -15499659 + SAR_DM Satellite Satellite 1 731 -416 9 688 1196 262 58 48 chrUextra 13505116 13505817 -15498839 + SAR_DM Satellite Satellite 326 1033 -439 9 688 968 52 15 0 chrUextra 13505925 13506061 -15498595 - BATUMI_I LTR Pao -1399 6564 6427 9 688 1688 68 0 4 chrUextra 13506084 13506334 -15498322 + BATUMI_I LTR Pao 7303 7551 -412 9 688 1836 82 0 7 chrUextra 13506313 13506584 -15498072 + BATUMI_I LTR Pao 7695 7963 0 9 688 363 57 239 14 chrUextra 13506584 13506652 -15498004 + BATUMI_I LTR Pao 7002 7085 -878 9 688 21 89 0 0 chrUextra 13507040 13507096 -15497560 + AT_rich Low_complexity Low_complexity 1 56 0 9 688 5580 18 3 15 chrUextra 13507581 13508298 -15496358 - BATUMI_I LTR Pao -4633 3330 2623 9 688 5890 22 1 1 chrUextra 13508413 13509137 -15495519 + R1_DM LINE R1 3791 4514 -842 9 688 1539 0 0 0 chrUextra 13509237 13509408 -15495248 + (TCTTG)n Simple_repeat Simple_repeat 5 175 0 9 688 4418 2 0 0 chrUextra 13509408 13509914 -15494742 - TABOR_LTR LTR Gypsy 0 506 1 9 688 426 0 0 0 chrUextra 13509912 13509965 -15494691 - TABOR_I LTR Gypsy 0 6336 6284 9 688 6257 0 0 3 chrUextra 13510065 13510793 -15493863 + ROO_I LTR Pao 7037 7762 -494 9 688 501 57 0 0 chrUextra 13510893 13510963 -15493693 - BATUMI_I LTR Pao -1467 6496 6427 9 688 5196 9 0 5 chrUextra 13510986 13511621 -15493035 + BATUMI_I LTR Pao 7303 7934 -29 9 688 4863 58 3 51 chrUextra 13511721 13512448 -15492208 + BATUMI_I LTR Pao 2434 3125 -4838 9 688 3221 175 10 10 chrUextra 13512549 13513277 -15491379 - SAR_DM Satellite Satellite -489 983 256 9 688 820 19 0 28 chrUextra 13513377 13513485 -15491171 - NTS_DM Other Other -111 129 25 9 688 4780 12 2 2 chrUextra 13513531 13514102 -15490554 - DM412B_LTR LTR Gypsy 0 571 1 9 688 569 212 0 0 chrUextra 13514205 13514337 -15490319 - ARS406_DM Unknown Unknown -221 132 1 9 688 2665 184 19 23 chrUextra 13514240 13514930 -15489726 + SAR_DM Satellite Satellite 191 877 -595 9 688 307 191 14 14 chrUextra 13515046 13515115 -15489541 + HETRP_DM Satellite Satellite 1601 1669 -203 9 688 658 217 0 32 chrUextra 13515232 13515389 -15489267 + HETRP_DM Satellite Satellite 1518 1669 -203 9 688 657 186 7 14 chrUextra 13515527 13515669 -15488987 + HETRP_DM Satellite Satellite 1529 1669 -203 9 688 6001 14 1 1 chrUextra 13515862 13516589 -15488067 + R1_DM LINE R1 3387 4113 -1243 9 688 1383 6 0 54 chrUextra 13516689 13516875 -15487781 - DM176_LTR LTR Gypsy -331 176 1 9 688 1861 77 4 0 chrUextra 13517156 13517417 -15487239 + Baggins1 LINE LOA 4762 5023 -430 9 688 5837 21 33 0 chrUextra 13517519 13518245 -15486411 - FW_DM LINE Jockey -3426 1266 517 9 688 2946 191 17 20 chrUextra 13518345 13519073 -15485583 + SAR_DM Satellite Satellite 1 725 -208 9 688 5142 80 3 13 chrUextra 13520016 13520729 -15483927 - Gypsy12_I LTR Gypsy 0 5546 4841 9 688 6370 1 1 0 chrUextra 13520829 13521557 -15483099 + LSU-rRNA_Dme rRNA rRNA 3055 3783 -117 9 688 5945 25 0 1 chrUextra 13521657 13522385 -15482271 + R1_DM LINE R1 2139 2865 -2491 9 688 1302 250 35 40 chrUextra 13522487 13522568 -15482088 - SAR_DM Satellite Satellite -675 797 600 9 688 2495 69 3 0 chrUextra 13522568 13522928 -15481728 + XDMR Unknown Unknown 1 361 0 9 688 1932 71 3 0 chrUextra 13522928 13523210 -15481446 + XDMR Unknown Unknown 1 283 -78 9 688 1302 250 35 40 chrUextra 13522928 13523088 -15481568 - SAR_DM Satellite Satellite -675 599 200 9 688 3090 185 7 7 chrUextra 13523321 13524029 -15480627 - SAR_DM Satellite Satellite -396 1076 369 9 688 3271 5 0 0 chrUextra 13524141 13524517 -15480139 - LSU-rRNA_Dme rRNA rRNA -947 2953 2578 9 688 3019 6 0 0 chrUextra 13524519 13524869 -15479787 - R2_DM LINE R2 0 3607 3258 9 688 3162 5 0 60 chrUextra 13524969 13525384 -15479272 - LSU-rRNA_Dme rRNA rRNA -3510 390 1 9 688 21 95 0 0 chrUextra 13525396 13525459 -15479197 + AT_rich Low_complexity Low_complexity 1 63 0 9 688 6244 0 0 0 chrUextra 13525797 13526525 -15478131 + FW_DM LINE Jockey 2646 3373 -1319 9 688 800 80 0 17 chrUextra 13526627 13526977 -15477679 + RSP Satellite Satellite 1 344 0 9 688 893 98 6 18 chrUextra 13527016 13527353 -15477303 + RSP Satellite Satellite 1 333 -1 9 688 2410 18 0 0 chrUextra 13527453 13527739 -15476917 - MAX_I LTR Pao -1191 6723 6438 9 688 3563 52 0 0 chrUextra 13527719 13528181 -15476475 - MAX_I LTR Pao -2182 5732 5271 9 688 609 299 100 0 chrUextra 13528293 13528584 -15476072 + DM1731_I LTR Copia 1819 2138 -1838 9 688 244 277 22 65 chrUextra 13528781 13528920 -15475736 + DM1731_I LTR Copia 2269 2401 -1575 9 688 2778 78 65 0 chrUextra 13529110 13529508 -15475148 - Gypsy12_I LTR Gypsy -658 4888 4465 9 688 2135 110 3 12 chrUextra 13529505 13529827 -15474829 - Gypsy12_I LTR Gypsy -3725 1821 1503 9 688 4998 41 1 54 chrUextra 13529937 13530665 -15473991 - BATUMI_I LTR Pao -4739 3224 2535 9 688 652 0 0 0 chrUextra 13530765 13530840 -15473816 + ROO_I LTR Pao 6999 7073 -1183 9 688 5702 1 0 0 chrUextra 13530830 13531493 -15473163 + ROO_I LTR Pao 7208 7870 -386 9 688 824 20 10 0 chrUextra 13531593 13531694 -15472962 - Gypsy_LTR LTR Gypsy -380 102 1 9 688 5313 13 0 0 chrUextra 13531694 13532319 -15472337 - Gypsy_I LTR Gypsy 0 6507 5883 9 688 6120 0 1 0 chrUextra 13532421 13533149 -15471507 - TABOR_I LTR Gypsy -4634 1702 974 9 688 1133 8 0 7 chrUextra 13533249 13533384 -15471272 + (CAAGA)n Simple_repeat Simple_repeat 5 138 0 9 688 4418 2 0 0 chrUextra 13533384 13533890 -15470766 + TABOR_LTR LTR Gypsy 1 506 0 9 688 717 0 0 0 chrUextra 13533890 13533977 -15470679 + TABOR_I LTR Gypsy 1 87 -6249 9 688 1599 6 3 0 chrUextra 13534077 13534415 -15470241 + (CTTAT)n Simple_repeat Simple_repeat 1 339 0 9 688 198 0 0 0 chrUextra 13534415 13534437 -15470219 + (TTA)n Simple_repeat Simple_repeat 3 24 0 9 688 3023 0 0 0 chrUextra 13534437 13534805 -15469851 - I_DM LINE I -774 5457 5090 9 688 1853 59 15 15 chrUextra 13534991 13535250 -15469406 + DMCR1A LINE CR1 1624 1882 -2588 9 688 2931 47 24 0 chrUextra 13535250 13535633 -15469023 - DMCR1A LINE CR1 -954 3516 3125 9 688 6226 3 1 3 chrUextra 13535733 13536461 -15468195 - LSU-rRNA_Dme rRNA rRNA -2312 1588 862 9 688 5919 22 3 7 chrUextra 13536561 13537289 -15467367 + BATUMI_I LTR Pao 5629 6353 -1610 9 688 2086 26 8 0 chrUextra 13537403 13537668 -15466988 + MDG3_LTR LTR Gypsy 1 267 0 9 688 3872 2 0 0 chrUextra 13537667 13538117 -15466539 + MDG3_I LTR Gypsy 1 450 -4536 9 688 2675 197 14 25 chrUextra 13538217 13538941 -15465715 + SAR_DM Satellite Satellite 457 1172 -300 9 688 2149 48 50 9 chrUextra 13539045 13539384 -15465272 + PROTOP DNA P 471 823 -3657 9 688 2961 30 2 0 chrUextra 13539379 13539773 -15464883 + PROTOP DNA P 3802 4196 -284 9 688 5918 11 16 0 chrUextra 13539873 13540601 -15464055 + Invader2_I LTR Gypsy 236 975 -3617 9 688 6203 7 1 0 chrUextra 13540701 13541429 -15463227 + R1_DM LINE R1 4591 5319 -37 9 688 4170 72 113 6 chrUextra 13541529 13542181 -15462475 - BATUMI_I LTR Pao -6279 1684 963 9 688 35 71 0 0 chrUextra 13542187 13542257 -15462399 + AT_rich Low_complexity Low_complexity 1 70 0 9 688 6171 1 1 1 chrUextra 13542357 13543085 -15461571 + ROO_I LTR Pao 1252 1979 -6277 9 688 4298 17 7 0 chrUextra 13543185 13543727 -15460929 - PROTOP DNA P -163 4317 3772 9 688 1535 11 5 5 chrUextra 13543724 13543913 -15460743 - PROTOP DNA P -3182 1298 1110 9 688 437 124 0 147 chrUextra 13544013 13544137 -15460519 + STALKER4_LTR LTR Gypsy 287 399 -3 9 688 4988 7 43 0 chrUextra 13544137 13544741 -15459915 + Gypsy4_I LTR Gypsy 896 1525 -4763 9 688 6353 1 0 0 chrUextra 13544843 13545569 -15459087 - DOC LINE Jockey -396 4329 3604 9 688 2840 193 24 9 chrUextra 13545678 13546379 -15458277 - SAR_DM Satellite Satellite -569 903 192 9 688 725 97 0 0 chrUextra 13546283 13546397 -15458259 + ARS406_DM Unknown Unknown 1 114 -239 9 688 5904 17 7 4 chrUextra 13546497 13547225 -15457431 + MICROPIA_I LTR Gypsy 3535 4264 -212 9 688 2162 231 32 16 chrUextra 13547326 13548053 -15456603 + G_DM LINE Jockey 844 1575 -467 9 688 5781 0 0 1 chrUextra 13548153 13548836 -15455820 - LSU-rRNA_Dme rRNA rRNA -3001 899 218 9 688 6319 3 0 1 chrUextra 13548981 13549709 -15454947 - SSU-rRNA_Dme rRNA rRNA -812 1183 457 9 688 6227 4 0 6 chrUextra 13549809 13550537 -15454119 + Invader4_I LTR Gypsy 110 833 -1580 9 688 6241 3 0 0 chrUextra 13550637 13551365 -15453291 - R1_DM LINE R1 -2126 3230 2503 9 688 6144 8 1 3 chrUextra 13551465 13552192 -15452464 - SSU-rRNA_Dme rRNA rRNA -86 1909 1184 9 688 6164 0 7 0 chrUextra 13552293 13553021 -15451635 - LSU-rRNA_Dme rRNA rRNA -2720 1180 448 9 688 21 89 0 0 chrUextra 13553778 13553834 -15450822 + AT_rich Low_complexity Low_complexity 1 56 0 9 688 1246 18 0 12 chrUextra 13553966 13554132 -15450524 - NTS_DM Other Other -39 201 38 9 688 870 9 0 27 chrUextra 13554132 13554244 -15450412 - NTS_DM Other Other -107 133 25 9 688 22 56 0 0 chrUextra 13554270 13554306 -15450350 + AT_rich Low_complexity Low_complexity 1 36 0 9 688 255 125 0 0 chrUextra 13554319 13554359 -15450297 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 688 246 150 0 0 chrUextra 13554402 13554442 -15450214 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 688 246 150 0 0 chrUextra 13554494 13554534 -15450122 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 688 246 150 0 0 chrUextra 13554586 13554626 -15450030 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 688 22 56 0 0 chrUextra 13554631 13554667 -15449989 + AT_rich Low_complexity Low_complexity 1 36 0 9 688 4197 85 86 14 chrUextra 13554777 13555427 -15449229 + Gypsy12_I LTR Gypsy 4850 5546 0 9 688 371 111 13 77 chrUextra 13555427 13555505 -15449151 + Gypsy12_LTR LTR Gypsy 1 73 -2263 9 688 594 226 16 63 chrUextra 13555616 13555805 -15448851 + Gypsy3_LTR LTR Gypsy 213 392 -6 9 688 831 218 136 93 chrUextra 13555891 13556331 -15448325 + Gypsy3_I LTR Gypsy 27 485 -5692 9 688 6151 6 0 0 chrUextra 13556434 13557161 -15447495 + QUASIMODO_I LTR Gypsy 1989 2715 -3345 9 688 5956 15 0 0 chrUextra 13557261 13557989 -15446667 + PROTOP DNA P 1428 2155 -2325 9 688 276 77 0 0 chrUextra 13558733 13558772 -15445884 + (TC)n Simple_repeat Simple_repeat 1 39 0 9 688 4072 87 19 4 chrUextra 13558917 13559645 -15445011 + DOC3_DM LINE Jockey 3080 3837 -888 9 688 5350 38 15 28 chrUextra 13559745 13560473 -15444183 + BATUMI_I LTR Pao 1189 1907 -6056 9 688 735 11 0 0 chrUextra 13560573 13560660 -15443996 + CIRCE LINE Composite 4894 4980 -1376 9 688 2148 32 3 7 chrUextra 13561017 13561301 -15443355 + CIRCE LINE Composite 4981 5263 -1093 9 688 3412 16 0 2 chrUextra 13561401 13561827 -15442829 - BATUMI_I LTR Pao -236 7727 7303 9 688 2010 43 11 7 chrUextra 13561850 13562129 -15442527 + BATUMI_I LTR Pao 6427 6706 -1257 9 688 270 188 16 0 chrUextra 13562231 13562295 -15442361 + XDMR Unknown Unknown 297 361 0 9 688 3286 166 4 22 chrUextra 13562240 13562957 -15441699 - SAR_DM Satellite Satellite -353 1119 416 9 688 6026 15 0 6 chrUextra 13563057 13563785 -15440871 - FW_DM LINE Jockey -2286 2406 1683 9 688 34 24 0 0 chrUextra 13564008 13564049 -15440607 + AT_rich Low_complexity Low_complexity 1 41 0 9 688 21 95 0 0 chrUextra 13564262 13564325 -15440331 + AT_rich Low_complexity Low_complexity 1 63 0 9 688 1964 0 0 94 chrUextra 13564337 13564613 -15440043 + LSU-rRNA_Dme rRNA rRNA 1 250 -3650 9 688 3766 12 0 49 chrUextra 13564713 13565244 -15439412 + Invader2_I LTR Gypsy 4088 4592 0 9 688 1179 34 0 0 chrUextra 13565244 13565393 -15439263 + Invader2_LTR LTR Gypsy 118 266 0 9 688 240 163 0 20 chrUextra 13565393 13565441 -15439215 - IDEFIX_I LTR Gypsy -2495 3133 3087 9 688 6087 15 0 1 chrUextra 13565541 13566269 -15438387 + R1_DM LINE R1 1607 2333 -3023 9 688 6161 1 0 1 chrUextra 13566369 13567097 -15437559 - ROO_I LTR Pao -5011 3245 2519 9 688 1167 7 0 0 chrUextra 13567201 13567336 -15437320 - 5S_DM RNA RNA 0 135 1 9 688 1176 0 0 0 chrUextra 13567560 13567695 -15436961 - 5S_DM RNA RNA 0 135 1 9 688 2303 0 0 0 chrUextra 13568025 13568291 -15436365 + DM297_LTR LTR Gypsy 149 414 0 9 688 3592 9 0 2 chrUextra 13568291 13568753 -15435903 + DM297_I LTR Gypsy 1 461 -5706 9 688 21 95 0 0 chrUextra 13569072 13569135 -15435521 + AT_rich Low_complexity Low_complexity 1 63 0 9 688 3332 0 0 60 chrUextra 13569147 13569581 -15435075 + LSU-rRNA_Dme rRNA rRNA 1 408 -3492 9 688 779 72 24 8 chrUextra 13570104 13570230 -15434426 - STALKER4_I LTR Gypsy -5645 885 758 9 688 1332 185 24 7 chrUextra 13570509 13570892 -15433764 + SAR_DM Satellite Satellite 341 1094 -378 9 688 1065 182 75 53 chrUextra 13570915 13571234 -15433422 + SAR_DM Satellite Satellite 527 852 -620 9 688 2369 0 0 0 chrUextra 13571337 13571605 -15433051 + ROO_LTR LTR Pao 161 428 0 9 688 3999 4 0 0 chrUextra 13571605 13572065 -15432591 + LINEJ1_DM LINE Jockey 1350 1809 -3211 9 688 311 178 24 36 chrUextra 13572461 13572545 -15432111 - QUASIMODO_LTR LTR Gypsy -359 299 234 9 688 2167 77 12 15 chrUextra 13572547 13572875 -15431781 - QUASIMODO_LTR LTR Gypsy -326 332 6 9 688 4630 27 115 0 chrUextra 13572993 13573721 -15430935 + ROO_I LTR Pao 5740 6551 -1705 9 688 5398 46 2 3 chrUextra 13573821 13574548 -15430108 + BATUMI_I LTR Pao 5778 6744 -1170 9 688 6256 1 1 3 chrUextra 13574649 13575377 -15429279 - SSU-rRNA_Dme rRNA rRNA -433 1562 836 9 688 2988 174 16 17 chrUextra 13575477 13576188 -15428468 - SAR_DM Satellite Satellite -539 933 224 9 688 411 135 0 0 chrUextra 13576126 13576200 -15428456 + ARS406_DM Unknown Unknown 1 74 -279 9 688 6125 12 0 11 chrUextra 13576305 13577033 -15427623 - Gypsy12_I LTR Gypsy -307 5239 4520 9 688 2085 0 0 0 chrUextra 13577133 13577369 -15427287 + ROO_LTR LTR Pao 193 428 0 9 688 4213 2 0 0 chrUextra 13577369 13577861 -15426795 + ROO_I LTR Pao 1 492 -7764 9 688 2939 187 12 11 chrUextra 13577966 13578689 -15425967 + SAR_DM Satellite Satellite 195 918 -554 9 688 4112 67 14 14 chrUextra 13579617 13580178 -15424478 + Gypsy12_I LTR Gypsy 4394 4954 -592 9 688 1197 109 0 0 chrUextra 13580171 13580345 -15424311 + Gypsy12_I LTR Gypsy 5109 5282 -264 9 688 5709 0 4 34 chrUextra 13580445 13581173 -15423483 + LSU-rRNA_Dme rRNA rRNA 33 738 -3162 9 688 6345 3 1 0 chrUextra 13581273 13582001 -15422655 + LINEJ1_DM LINE Jockey 3898 4626 -394 9 688 40 49 0 0 chrUextra 13582604 13582665 -15421991 + AT_rich Low_complexity Low_complexity 1 61 0 9 688 3691 60 4 6 chrUextra 13582929 13583430 -15421226 - R1_DM LINE R1 -4856 500 1 9 688 917 44 0 0 chrUextra 13583463 13583577 -15421079 - R1_DM LINE R1 0 5356 5243 9 688 658 12 0 0 chrUextra 13583574 13583655 -15421001 - R1_DM LINE R1 -290 5066 4986 9 688 340 0 0 0 chrUextra 13583761 13583801 -15420855 + R1_DM LINE R1 5317 5356 0 9 688 5675 1 3 1 chrUextra 13583814 13584484 -15420172 + R1_DM LINE R1 3231 3901 -1455 9 688 2820 196 23 23 chrUextra 13585411 13586138 -15418518 + SAR_DM Satellite Satellite 1 727 -203 9 688 2432 193 28 30 chrUextra 13586240 13586918 -15417738 - HETA LINE telomeric -1950 4131 3455 9 688 2957 0 0 6 chrUextra 13587065 13587415 -15417241 + Copia_I LTR Copia 4246 4593 0 9 688 2297 0 0 0 chrUextra 13587415 13587691 -15416965 + Copia_LTR LTR Copia 1 276 0 9 688 3006 166 33 17 chrUextra 13587893 13588615 -15416041 - SAR_DM Satellite Satellite -493 979 246 9 688 824 25 0 8 chrUextra 13588719 13588841 -15415815 + NTS_DM Other Other 81 201 -39 9 688 870 9 0 27 chrUextra 13588893 13589005 -15415651 + NTS_DM Other Other 25 133 -107 9 688 1234 24 0 6 chrUextra 13589005 13589170 -15415486 + NTS_DM Other Other 38 201 -39 9 688 870 9 0 27 chrUextra 13589222 13589334 -15415322 + NTS_DM Other Other 25 133 -107 9 688 875 9 9 0 chrUextra 13589334 13589446 -15415210 + NTS_DM Other Other 38 150 -90 9 688 3144 172 15 16 chrUextra 13589547 13590273 -15414383 - SAR_DM Satellite Satellite -365 1107 383 9 688 3039 179 11 21 chrUextra 13590373 13591096 -15413560 + SAR_DM Satellite Satellite 404 1119 -353 9 688 22 56 0 0 chrUextra 13591547 13591583 -15413073 + AT_rich Low_complexity Low_complexity 1 36 0 9 688 865 128 5 11 chrUextra 13591694 13591883 -15412773 + S_DM DNA Tc1 1549 1736 0 9 688 6054 15 0 0 chrUextra 13592027 13592754 -15411902 - ROO_I LTR Pao -2262 5994 5268 9 688 1885 201 61 57 chrUextra 13593685 13593917 -15410739 - TAHRE LINE telomeric -2863 7600 7348 9 688 198 0 0 0 chrUextra 13593917 13593939 -15410717 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 9 688 1885 201 61 57 chrUextra 13593939 13594360 -15410296 - TAHRE LINE telomeric -3116 7347 6944 9 688 1803 216 86 46 chrUextra 13594515 13595232 -15409424 - Gypsy12_LTR LTR Gypsy -554 1726 999 9 688 1638 326 7 7 chrUextra 13595335 13596061 -15408595 + MICROPIA_I LTR Gypsy 1905 2630 -1846 9 688 3535 196 0 1 chrUextra 13596990 13597716 -15406940 + ROVER-I_DM LTR Gypsy 3020 3744 -2840 9 688 5479 45 14 1 chrUextra 13597816 13598543 -15406113 - R1_DM LINE R1 -4032 1324 589 9 688 210 37 0 0 chrUextra 13598674 13598701 -15405955 + (TA)n Simple_repeat Simple_repeat 1 27 0 9 688 4497 2 0 2 chrUextra 13599494 13600027 -15404629 - NOMAD_LTR LTR Gypsy 0 518 1 9 688 26 0 0 0 chrUextra 13600075 13600101 -15404555 + AT_rich Low_complexity Low_complexity 1 26 0 9 688 6206 1 3 4 chrUextra 13600297 13601024 -15403632 + SSU-rRNA_Dme rRNA rRNA 1083 1808 -187 9 688 3229 164 15 12 chrUextra 13601127 13601850 -15402806 + SAR_DM Satellite Satellite 282 1006 -466 9 688 3636 33 0 0 chrUextra 13601951 13602400 -15402256 + R1_DM LINE R1 1380 1828 -3528 9 688 2228 46 0 0 chrUextra 13602398 13602678 -15401978 + R1_DM LINE R1 1317 1596 -3760 9 688 951 0 0 9 chrUextra 13602780 13602896 -15401760 + MICROPIA_I LTR Gypsy 4362 4476 0 9 688 3905 6 0 61 chrUextra 13602896 13603403 -15401253 + MICROPIA_LTR LTR Gypsy 1 476 0 9 688 809 39 0 0 chrUextra 13603403 13603505 -15401151 - ACCORD2_I LTR Gypsy -6128 1084 983 9 688 6133 0 1 1 chrUextra 13604432 13605159 -15399497 - ROO_I LTR Pao -3982 4274 3548 9 688 1315 28 45 0 chrUextra 13605262 13605439 -15399217 - PROTOP_B DNA P -793 360 176 9 688 694 276 22 44 chrUextra 13605431 13605844 -15398812 + QUASIMODO_I LTR Gypsy 5527 5930 -130 9 688 1382 80 132 87 chrUextra 13606251 13606539 -15398117 - STALKER4_LTR LTR Gypsy -33 369 69 9 688 406 293 52 16 chrUextra 13606617 13606811 -15397845 - Invader2_I LTR Gypsy -641 3951 3820 9 688 6041 10 0 1 chrUextra 13606913 13607640 -15397016 + FW_DM LINE Jockey 2580 3305 -1387 9 688 6269 0 0 0 chrUextra 13607740 13608467 -15396189 + DOC LINE Jockey 348 1074 -3651 9 688 3142 44 36 17 chrUextra 13608567 13609033 -15395623 + QUASIMODO_I LTR Gypsy 4700 5174 -886 9 688 1653 34 0 0 chrUextra 13609045 13609280 -15395376 + QUASIMODO_I LTR Gypsy 5493 5727 -333 9 688 5948 8 0 0 chrUextra 13609394 13610121 -15394535 + DM297_I LTR Gypsy 1151 1877 -4290 9 688 5976 7 0 0 chrUextra 13610221 13610948 -15393708 - DM297_I LTR Gypsy -4202 1965 1239 9 688 5579 28 10 0 chrUextra 13611048 13611775 -15392881 + PROTOP_A DNA P 125 858 -247 9 688 6329 4 0 0 chrUextra 13612702 13613429 -15391227 + DM1731_I LTR Copia 1247 1973 -2003 9 688 3336 27 4 45 chrUextra 13613668 13614134 -15390522 + CIRCE LINE Composite 4981 5427 -929 9 688 253 29 0 0 chrUextra 13614221 13614256 -15390400 + CIRCE LINE Composite 5428 5462 -894 9 688 6369 0 1 0 chrUextra 13614356 13615083 -15389573 - LSU-rRNA_Dme rRNA rRNA -536 3364 2637 9 688 6145 12 1 0 chrUextra 13615183 13615910 -15388746 - DM1731_I LTR Copia -2814 1162 435 9 688 6056 14 8 0 chrUextra 13616010 13616737 -15387919 - Copia2_I LTR Copia -2577 1585 853 9 688 6374 0 0 0 chrUextra 13616837 13617564 -15387092 + HMSBEAGLE_I LTR Gypsy 1626 2352 -4177 9 688 786 121 0 0 chrUextra 13617664 13617796 -15386860 - ARS406_DM Unknown Unknown -220 133 2 9 688 2851 186 9 9 chrUextra 13617704 13618389 -15386267 + SAR_DM Satellite Satellite 195 879 -593 9 688 5798 26 1 3 chrUextra 13618491 13619214 -15385442 + R1_DM LINE R1 2134 2855 -2501 9 688 444 130 0 0 chrUextra 13619330 13619399 -15385257 + HMSBEAGLE_I LTR Gypsy 1353 1421 -5108 9 688 4615 64 8 6 chrUextra 13619413 13620045 -15384611 + HMSBEAGLE_I LTR Gypsy 1496 2128 -4401 9 688 6253 4 0 0 chrUextra 13620145 13620872 -15383784 + DMRT1B LINE R1 1314 2040 -3143 9 688 6208 0 1 0 chrUextra 13620972 13621699 -15382957 + ROO_I LTR Pao 1617 2344 -5912 9 688 5838 1 1 0 chrUextra 13621799 13622477 -15382179 - Copia_I LTR Copia -3914 679 1 9 688 305 0 20 0 chrUextra 13622477 13622526 -15382130 - Copia_LTR LTR Copia 0 276 227 9 688 6344 0 0 0 chrUextra 13622626 13623353 -15381303 + Invader3_I LTR Gypsy 3632 4358 -530 9 688 6172 1 3 1 chrUextra 13623453 13624180 -15380476 + R1_DM LINE R1 1112 1839 -3517 9 688 2981 87 39 30 chrUextra 13624280 13625007 -15379649 + PROTOP_A DNA P 299 1025 -128 9 688 782 26 0 8 chrUextra 13625107 13625224 -15379432 + NTS_DM Other Other 86 201 -39 9 688 21 57 0 0 chrUextra 13625224 13625259 -15379397 + AT_rich Low_complexity Low_complexity 1 35 0 9 688 832 9 9 27 chrUextra 13625285 13625396 -15379260 + NTS_DM Other Other 25 133 -107 9 688 817 0 0 0 chrUextra 13625396 13625492 -15379164 + NTS_DM Other Other 38 133 -107 9 688 1408 20 20 20 chrUextra 13625492 13625695 -15378961 + NTS_DM Other Other 38 240 0 9 688 1117 14 7 0 chrUextra 13625695 13625834 -15378822 + NTS_DM Other Other 1 140 -100 9 688 2870 171 49 17 chrUextra 13625934 13626654 -15378002 - SAR_DM Satellite Satellite -484 988 246 9 688 261 192 0 0 chrUextra 13626609 13626661 -15377995 + XDMR_DM Unknown Unknown 36 87 -273 9 688 2041 0 8 0 chrUextra 13626761 13627003 -15377653 - R1_DM LINE R1 -5112 244 1 9 688 3953 4 0 0 chrUextra 13627032 13627488 -15377168 - LSU-rRNA_Dme rRNA rRNA -1246 2654 2199 9 688 2611 162 18 9 chrUextra 13627591 13628158 -15376498 + SAR_DM Satellite Satellite 332 903 -569 9 688 943 82 0 0 chrUextra 13628165 13628311 -15376345 - ARS406_DM Unknown Unknown -195 158 13 9 688 897 173 102 15 chrUextra 13628443 13628648 -15376008 + DMLTR5 LTR Gypsy 44 266 0 9 688 351 49 65 16 chrUextra 13628647 13628709 -15375947 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 9 688 244 128 0 21 chrUextra 13628731 13628779 -15375877 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 9 688 244 128 0 21 chrUextra 13629009 13629057 -15375599 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 9 688 2845 192 28 20 chrUextra 13629246 13629969 -15374687 + SAR_DM Satellite Satellite 1 728 -208 9 688 1272 241 48 62 chrUextra 13630072 13630793 -15373863 - SAR_DM Satellite Satellite -291 1181 471 9 689 3857 0 0 2 chrUextra 13632000 13632450 -15372206 + LINEJ1_DM LINE Jockey 4559 5007 -13 9 689 4655 48 8 2 chrUextra 13632550 13633170 -15371486 - TART LINE telomeric -11809 2668 2045 9 689 765 87 0 9 chrUextra 13633161 13633277 -15371379 - TART_B1 LINE telomeric -4317 6337 6223 9 689 942 9 0 0 chrUextra 13633378 13633488 -15371168 - NTS_DM Other Other -130 110 1 9 689 1408 20 20 20 chrUextra 13633488 13633691 -15370965 - NTS_DM Other Other 0 240 38 9 689 817 0 0 0 chrUextra 13633691 13633787 -15370869 - NTS_DM Other Other -107 133 38 9 689 802 9 9 36 chrUextra 13633787 13633899 -15370757 - NTS_DM Other Other -107 133 25 9 689 21 57 0 0 chrUextra 13633925 13633960 -15370696 + AT_rich Low_complexity Low_complexity 1 35 0 9 689 1019 21 0 7 chrUextra 13633960 13634104 -15370552 - NTS_DM Other Other -39 201 59 9 689 5975 17 0 6 chrUextra 13634205 13634931 -15369725 - FW_DM LINE Jockey -2348 2344 1623 9 689 27 0 0 0 chrUextra 13635536 13635563 -15369093 + AT_rich Low_complexity Low_complexity 1 27 0 9 689 1594 0 0 5 chrUextra 13635570 13635758 -15368898 + ROO_LTR LTR Pao 1 187 -241 9 689 418 17 0 0 chrUextra 13635858 13635918 -15368738 + Copia_LTR LTR Copia 217 276 0 9 689 780 175 0 0 chrUextra 13635925 13636085 -15368571 - SAR_DM Satellite Satellite -774 698 539 9 689 934 193 29 8 chrUextra 13636096 13636342 -15368314 - SAR_DM Satellite Satellite -683 789 539 9 689 758 189 30 17 chrUextra 13636353 13636585 -15368071 - SAR_DM Satellite Satellite -683 789 555 9 689 3298 162 15 15 chrUextra 13636685 13637412 -15367244 + SAR_DM Satellite Satellite 293 1019 -453 9 689 5882 21 12 0 chrUextra 13637513 13638239 -15366417 + NINJA_I LTR Pao 2038 2772 -3239 9 689 472 278 71 81 chrUextra 13638358 13638646 -15366010 + SAR_DM Satellite Satellite 429 1009 -463 9 689 522 277 50 50 chrUextra 13638646 13639007 -15365649 - XDMR Unknown Unknown 0 361 1 9 689 472 278 71 81 chrUextra 13639007 13639063 -15365593 + SAR_DM Satellite Satellite 1010 1126 -346 9 689 6218 0 0 0 chrUextra 13639166 13639893 -15364763 + ROO_I LTR Pao 6026 6752 -1504 9 689 3781 39 12 0 chrUextra 13639993 13640479 -15364177 - DMRT1A LINE R1 -1263 3920 3429 9 689 1235 97 24 39 chrUextra 13640514 13640719 -15363937 - CIRCE LINE Composite -2219 4137 3936 9 689 5905 25 10 0 chrUextra 13641647 13642374 -15362282 - R1_DM LINE R1 -1984 3372 2639 9 689 2783 198 18 23 chrUextra 13642474 13643195 -15361461 + SAR_DM Satellite Satellite 1 716 -208 9 689 284 104 21 0 chrUextra 13643152 13643200 -15361456 - ARS406_DM Unknown Unknown -164 189 141 9 689 593 0 0 13 chrUextra 13643301 13643377 -15361279 - DMRT1B LINE R1 -807 4376 4302 9 689 5541 3 26 0 chrUextra 13643373 13644028 -15360628 - DMRT1B LINE R1 -2629 2554 1883 9 689 3163 60 5 7 chrUextra 13644128 13644564 -15360092 - R1_DM LINE R1 -4921 435 1 9 689 913 53 0 0 chrUextra 13644597 13644711 -15359945 - R1_DM LINE R1 0 5356 5243 9 689 1082 7 122 0 chrUextra 13644708 13644855 -15359801 - R1_DM LINE R1 -290 5066 4902 9 689 898 85 8 0 chrUextra 13644955 13645085 -15359571 - R1_DM LINE R1 -5225 131 1 9 689 4505 18 16 11 chrUextra 13645118 13645682 -15358974 - R1_DM LINE R1 0 5356 4790 9 689 5687 19 28 1 chrUextra 13645782 13646509 -15358147 + IVK_DM LINE I 1228 1973 -3429 9 689 3126 167 33 7 chrUextra 13646611 13647315 -15357341 - SAR_DM Satellite Satellite -425 1047 326 9 689 6211 7 3 0 chrUextra 13647436 13648163 -15356493 + Gypsy6_I LTR Gypsy 1249 1977 -5035 9 689 5971 7 1 1 chrUextra 13649090 13649817 -15354839 - R1_DM LINE R1 -4160 1196 470 9 689 2410 196 73 7 chrUextra 13649917 13650640 -15354016 + SAR_DM Satellite Satellite 1 770 -242 9 689 891 10 0 0 chrUextra 13650744 13650848 -15353808 - NTS_DM Other Other -136 104 1 9 689 1741 17 17 17 chrUextra 13650848 13651088 -15353568 - NTS_DM Other Other 0 240 1 9 689 1847 4 17 13 chrUextra 13651088 13651327 -15353329 - NTS_DM Other Other 0 240 1 9 689 977 7 28 21 chrUextra 13651327 13651471 -15353185 - NTS_DM Other Other 0 240 96 9 689 327 71 0 0 chrUextra 13651571 13651613 -15353043 - R1_DM LINE R1 -72 5284 5243 9 689 5387 23 65 0 chrUextra 13651610 13652298 -15352358 - R1_DM LINE R1 -290 5066 4334 9 689 391 57 0 19 chrUextra 13652401 13652455 -15352201 - R1_DM LINE R1 -474 4882 4830 9 689 2821 11 63 0 chrUextra 13652455 13652656 -15352000 + Stalker3_LTR LTR Gypsy 1 201 -171 9 689 207 0 0 0 chrUextra 13652656 13652679 -15351977 + (ATAAG)n Simple_repeat Simple_repeat 2 24 0 9 689 2821 11 63 0 chrUextra 13652679 13652827 -15351829 + Stalker3_LTR LTR Gypsy 202 370 -2 9 689 291 49 0 0 chrUextra 13652827 13652868 -15351788 + Stalker2_I LTR Gypsy 1 41 -7361 9 689 290 51 136 0 chrUextra 13653066 13653125 -15351531 + Stalker2_I LTR Gypsy 242 308 -7094 9 689 5741 1 6 0 chrUextra 13654052 13654779 -15349877 - DM412 LTR Gypsy -5042 1855 1125 9 689 2442 217 29 10 chrUextra 13654879 13655600 -15349056 + SAR_DM Satellite Satellite 483 1217 -255 9 689 6217 1 6 0 chrUextra 13655706 13656426 -15348230 + LSU-rRNA_Dme rRNA rRNA 3177 3900 0 9 689 4529 6 0 7 chrUextra 13656588 13657130 -15347526 - LINEJ1_DM LINE Jockey -2 5018 4481 9 689 6142 0 0 3 chrUextra 13657360 13658087 -15346569 + ROO_I LTR Pao 3495 4219 -4037 9 689 390 147 160 15 chrUextra 13658190 13658321 -15346335 - TAHRE LINE telomeric -10308 155 6 9 689 2315 83 10 0 chrUextra 13658308 13658695 -15345961 - HETA LINE telomeric -2 6079 5745 9 689 385 109 86 11 chrUextra 13658688 13658781 -15345875 - TART LINE telomeric -4851 9626 9527 9 689 6080 7 1 3 chrUextra 13659014 13659741 -15344915 + R1_DM LINE R1 3184 3909 -1447 9 689 2824 180 34 23 chrUextra 13659841 13660568 -15344088 + SAR_DM Satellite Satellite 422 1156 -316 9 689 3682 56 38 0 chrUextra 13660839 13661391 -15343265 - PROTOP_A DNA P 0 1105 573 9 689 488 119 36 0 chrUextra 13661578 13661662 -15342994 + NTS_DM Other Other 4 90 -150 9 689 28 48 0 0 chrUextra 13661935 13661977 -15342679 + AT_rich Low_complexity Low_complexity 1 42 0 9 689 1896 34 82 11 chrUextra 13662322 13662591 -15342065 + BATUMI_I LTR Pao 6463 6750 -1213 9 689 3087 24 2 70 chrUextra 13662609 13663049 -15341607 - BATUMI_I LTR Pao -5300 2663 2254 9 689 6067 8 1 0 chrUextra 13663149 13663876 -15340780 + DM176_I LTR Gypsy 3979 4706 -1714 9 689 498 17 0 0 chrUextra 13663976 13664034 -15340622 + STALKER4_LTR LTR Gypsy 292 349 -53 9 689 2188 146 69 22 chrUextra 13664061 13664693 -15339963 + Stalker2_I LTR Gypsy 291 999 -5531 9 689 1898 178 16 7 chrUextra 13664804 13665235 -15339421 + SAR_DM Satellite Satellite 469 903 -569 9 689 706 32 53 0 chrUextra 13665150 13665245 -15339411 - ARS406_DM Unknown Unknown -164 189 90 9 689 1160 196 7 4 chrUextra 13665250 13665527 -15339129 + SAR_DM Satellite Satellite 496 773 -699 9 689 3011 189 10 8 chrUextra 13666457 13667174 -15337482 + SAR_DM Satellite Satellite 212 929 -543 9 689 1088 21 0 20 chrUextra 13667285 13667431 -15337225 + NTS_DM Other Other 20 162 -78 9 689 488 119 36 0 chrUextra 13667541 13667625 -15337031 + NTS_DM Other Other 4 90 -150 9 689 28 48 0 0 chrUextra 13667898 13667940 -15336716 + AT_rich Low_complexity Low_complexity 1 42 0 9 689 3759 177 16 3 chrUextra 13668111 13668838 -15335818 + IDEFIX_I LTR Gypsy 658 1394 -4234 9 689 5316 49 4 11 chrUextra 13668938 13669665 -15334991 + BATUMI_I LTR Pao 2956 3677 -4286 9 689 246 150 0 0 chrUextra 13669796 13669836 -15334820 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 689 4694 7 11 0 chrUextra 13669941 13670492 -15334164 - LSU-rRNA_Dme rRNA rRNA 0 3900 3344 9 689 3118 18 100 0 chrUextra 13670592 13671319 -15333337 + R1_DM LINE R1 1599 2398 -2958 9 689 5119 22 81 0 chrUextra 13671419 13672146 -15332510 - R1_DM LINE R1 -2146 3210 2425 9 689 2287 261 12 12 chrUextra 13672247 13672972 -15331684 + ROVER-I_DM LTR Gypsy 2594 3318 -3266 9 689 944 140 41 54 chrUextra 13673073 13673315 -15331341 + ROVER-LTR_DM LTR Gypsy 129 367 0 9 689 766 191 26 152 chrUextra 13673315 13673742 -15330914 + ROVER-I_DM LTR Gypsy 1 373 -6211 9 689 2398 102 21 17 chrUextra 13673903 13674484 -15330172 + DMSAT6 Satellite Satellite 1 582 -152 9 689 345 234 0 0 chrUextra 13674486 13674623 -15330033 + (TTATG)n Simple_repeat Simple_repeat 2 138 0 9 689 2745 23 63 0 chrUextra 13674732 13674933 -15329723 + Stalker3_LTR LTR Gypsy 1 201 -171 9 689 207 0 0 0 chrUextra 13674933 13674956 -15329700 + (ATAAG)n Simple_repeat Simple_repeat 2 24 0 9 689 2745 23 63 0 chrUextra 13674956 13675104 -15329552 + Stalker3_LTR LTR Gypsy 202 370 -2 9 689 291 49 0 0 chrUextra 13675104 13675145 -15329511 + Stalker2_I LTR Gypsy 1 41 -7361 9 689 470 140 75 0 chrUextra 13675343 13675450 -15329206 + Stalker2_I LTR Gypsy 242 356 -7046 9 689 3786 18 66 6 chrUextra 13675554 13676281 -15328375 - FW_DM LINE Jockey -655 4037 3267 9 689 1236 17 22 22 chrUextra 13676381 13676565 -15328091 + NTS_DM Other Other 57 240 0 9 689 1731 21 17 17 chrUextra 13676565 13676805 -15327851 + NTS_DM Other Other 1 240 0 9 689 1756 17 17 17 chrUextra 13676805 13677045 -15327611 + NTS_DM Other Other 1 240 0 9 689 510 16 16 0 chrUextra 13677045 13677108 -15327548 + NTS_DM Other Other 1 64 -176 9 689 591 153 38 15 chrUextra 13677208 13677341 -15327315 + SAR_DM Satellite Satellite 798 933 -539 9 689 890 50 0 0 chrUextra 13677222 13677343 -15327313 - ARS406_DM Unknown Unknown -164 189 69 9 689 5086 2 0 0 chrUextra 13677345 13677935 -15326721 + G2_DM LINE Jockey 1813 2402 -700 9 689 394 100 0 0 chrUextra 13678035 13678095 -15326561 + Gypsy12_I LTR Gypsy 1495 1554 -3992 9 689 2128 113 0 15 chrUextra 13678102 13678426 -15326230 + Gypsy12_I LTR Gypsy 1503 1821 -3725 9 689 2235 88 83 0 chrUextra 13678423 13678762 -15325894 + Gypsy12_I LTR Gypsy 4465 4831 -715 9 689 4711 0 4 0 chrUextra 13678862 13679423 -15325233 - DOC LINE Jockey -3538 1187 625 9 689 1062 89 0 19 chrUextra 13679429 13679589 -15325067 - Gypsy7_I LTR Gypsy -2064 2920 2764 9 689 6202 6 1 0 chrUextra 13681343 13682069 -15322587 + R1_DM LINE R1 1771 2497 -2859 9 689 1073 68 0 0 chrUextra 13682170 13682316 -15322340 + HOBO DNA hAT 801 946 -2070 9 689 3446 92 6 6 chrUextra 13682321 13682857 -15321799 + HOBO DNA hAT 1100 1635 -1381 9 689 6277 4 1 0 chrUextra 13682997 13683724 -15320932 - Gypsy6_I LTR Gypsy -5132 1880 1153 9 689 23 54 0 0 chrUextra 13683824 13683861 -15320795 + AT_rich Low_complexity Low_complexity 1 37 0 9 689 807 19 9 27 chrUextra 13683887 13683998 -15320658 + NTS_DM Other Other 25 133 -107 9 689 817 0 0 0 chrUextra 13683998 13684094 -15320562 + NTS_DM Other Other 38 133 -107 9 689 1408 20 20 20 chrUextra 13684094 13684297 -15320359 + NTS_DM Other Other 38 240 0 9 689 1713 25 17 17 chrUextra 13684297 13684537 -15320119 + NTS_DM Other Other 1 240 0 9 689 6217 7 0 0 chrUextra 13684651 13685378 -15319278 + DOC LINE Jockey 3017 3743 -982 9 689 680 0 0 0 chrUextra 13685478 13685560 -15319096 + R1_DM LINE R1 4985 5066 -290 9 689 934 35 0 0 chrUextra 13685557 13685671 -15318985 + R1_DM LINE R1 5243 5356 0 9 689 2190 65 7 7 chrUextra 13685704 13686013 -15318643 + R1_DM LINE R1 1 309 -5047 9 689 1544 41 0 0 chrUextra 13686010 13686205 -15318451 + R1_DM LINE R1 1503 1697 -3659 9 689 2159 0 0 0 chrUextra 13686305 13686550 -15318106 - TABOR_LTR LTR Gypsy -261 245 1 9 689 4119 2 0 2 chrUextra 13686550 13687032 -15317624 + FW_DM LINE Jockey 857 1337 -3355 9 689 6251 3 3 0 chrUextra 13687132 13687859 -15316797 + DOC LINE Jockey 3366 4094 -631 9 689 276 185 250 42 chrUextra 13688066 13688162 -15316494 + HETRP_DM Satellite Satellite 1519 1634 -238 9 689 787 170 6 19 chrUextra 13688210 13688366 -15316290 + HETRP_DM Satellite Satellite 1516 1669 -203 9 689 276 185 250 42 chrUextra 13688524 13688620 -15316036 + HETRP_DM Satellite Satellite 1519 1634 -238 9 689 374 307 44 31 chrUextra 13688837 13689487 -15315169 + MDG1_I LTR Gypsy 1456 2112 -4501 9 689 5982 8 1 0 chrUextra 13689616 13690340 -15314316 + STALKER4_I LTR Gypsy 5471 6195 -335 9 689 1945 50 42 0 chrUextra 13690441 13690700 -15313956 + R1_DM LINE R1 1348 1617 -3739 9 689 3731 18 0 9 chrUextra 13690712 13691167 -15313489 + R1_DM LINE R1 2001 2451 -2905 9 689 6165 7 0 0 chrUextra 13692094 13692821 -15311835 + DOC LINE Jockey 2745 3471 -1254 9 689 3178 174 8 8 chrUextra 13692933 13693641 -15311015 + SAR_DM Satellite Satellite 369 1076 -396 9 689 4533 29 0 0 chrUextra 13693748 13694307 -15310349 - DMCR1A LINE CR1 -1816 2654 2096 9 689 303 66 0 32 chrUextra 13694408 13694471 -15310185 + DMSAT6 Satellite Satellite 279 339 -131 9 689 1734 21 17 17 chrUextra 13694599 13694839 -15309817 + NTS_DM Other Other 1 240 0 9 689 1764 21 17 13 chrUextra 13694839 13695078 -15309578 + NTS_DM Other Other 1 240 0 9 689 1735 5 13 13 chrUextra 13695078 13695302 -15309354 + NTS_DM Other Other 1 224 -16 9 689 5993 23 0 0 chrUextra 13695402 13696129 -15308527 - R1_DM LINE R1 -1600 3756 3030 9 689 5677 18 56 8 chrUextra 13696229 13696956 -15307700 + FW_DM LINE Jockey 2094 2855 -1837 9 689 5920 6 0 0 chrUextra 13697056 13697783 -15306873 - QUASIMODO_I LTR Gypsy -2239 3821 3095 9 689 31 68 0 0 chrUextra 13698003 13698062 -15306594 + AT_rich Low_complexity Low_complexity 1 59 0 9 689 27 81 0 0 chrUextra 13698123 13698185 -15306471 + AT_rich Low_complexity Low_complexity 1 62 0 9 689 5071 99 0 0 chrUextra 13698712 13699437 -15305219 + HMSBEAGLE_I LTR Gypsy 4664 5388 -1141 9 689 6118 11 0 0 chrUextra 13699537 13700264 -15304392 + DM297_I LTR Gypsy 2657 3383 -2784 9 689 5604 46 0 4 chrUextra 13700364 13701091 -15303565 + IDEFIX_I LTR Gypsy 2227 2950 -2678 9 689 564 117 117 0 chrUextra 13701191 13701294 -15303362 + STALKER4_I LTR Gypsy 5805 5919 -611 9 689 360 0 0 0 chrUextra 13702018 13702059 -15302597 + DM176_I LTR Gypsy 6380 6420 0 9 689 4319 4 0 0 chrUextra 13702059 13702566 -15302090 + DM176_LTR LTR Gypsy 1 507 0 9 689 969 100 0 6 chrUextra 13702570 13702731 -15301925 - ARS406_DM Unknown Unknown -193 160 1 9 689 405 204 0 18 chrUextra 13702635 13702745 -15301911 + SAR_DM Satellite Satellite 192 299 -1173 9 689 4306 36 80 0 chrUextra 13702982 13703572 -15301084 + PROTOP DNA P 1 637 -3843 9 689 2716 166 26 13 chrUextra 13703673 13704288 -15300368 - SAR_DM Satellite Satellite -577 895 273 9 689 755 10 29 10 chrUextra 13704295 13704399 -15300257 + FW_DM LINE Jockey 1 106 -4586 9 689 5699 45 0 0 chrUextra 13704499 13705226 -15299430 - FW_DM LINE Jockey -3821 871 145 9 689 6174 0 0 0 chrUextra 13705326 13706052 -15298604 - BLOOD_I LTR Gypsy -4618 1995 1270 9 689 2861 169 39 29 chrUextra 13706152 13706876 -15297780 - SAR_DM Satellite Satellite -354 1118 388 9 689 6243 6 0 0 chrUextra 13706978 13707704 -15296952 - R1_DM LINE R1 -2653 2703 1978 9 689 5813 25 4 3 chrUextra 13707804 13708530 -15296126 + R1_DM LINE R1 2606 3332 -2024 9 689 415 339 56 16 chrUextra 13708630 13709077 -15295579 - Gypsy10_I LTR Gypsy -3012 2266 1741 9 689 372 156 0 13 chrUextra 13709078 13709152 -15295504 - MDG1_LTR LTR Gypsy -26 416 344 9 689 1340 79 15 10 chrUextra 13709152 13709356 -15295300 - Gypsy10_LTR LTR Gypsy 0 364 160 9 689 26 64 0 0 chrUextra 13709552 13709599 -15295057 + AT_rich Low_complexity Low_complexity 1 47 0 9 689 377 323 14 14 chrUextra 13709960 13710180 -15294476 + Copia2_I LTR Copia 140 359 -3803 9 689 2167 132 16 9 chrUextra 13710286 13711008 -15293648 + DMSAT6 Satellite Satellite 1 726 0 9 689 5068 83 3 3 chrUextra 13711108 13711834 -15292822 - S_DM DNA Tc1 -763 973 248 9 689 6021 22 4 0 chrUextra 13711934 13712660 -15291996 - Copia2_I LTR Copia -1476 2686 1958 9 689 3942 0 0 0 chrUextra 13712760 13713241 -15291415 + ROO_I LTR Pao 7776 8256 0 9 689 2130 4 0 0 chrUextra 13713241 13713486 -15291170 + ROO_LTR LTR Pao 1 245 -183 9 689 3193 104 5 39 chrUextra 13713586 13714156 -15290500 - STALKER4_I LTR Gypsy -5963 567 17 9 689 239 223 223 0 chrUextra 13714209 13714312 -15290344 - STALKER4_LTR LTR Gypsy -29 373 248 9 689 342 0 69 52 chrUextra 13714412 13714470 -15290186 + NTS_DM Other Other 182 240 0 9 689 1301 6 0 18 chrUextra 13714470 13714635 -15290021 + NTS_DM Other Other 1 162 -78 9 689 488 119 36 0 chrUextra 13714745 13714829 -15289827 + NTS_DM Other Other 4 90 -150 9 689 22 56 0 0 chrUextra 13715102 13715138 -15289518 + AT_rich Low_complexity Low_complexity 1 36 0 9 689 3135 174 24 7 chrUextra 13715241 13715959 -15288697 - SAR_DM Satellite Satellite -411 1061 332 9 689 4858 47 32 3 chrUextra 13716064 13716744 -15287912 + DM297_I LTR Gypsy 3652 4351 -1816 9 689 321 25 0 0 chrUextra 13716750 13716790 -15287866 + MDG1_I LTR Gypsy 5401 5440 -1156 9 689 22 35 0 0 chrUextra 13717105 13717134 -15287522 + AT_rich Low_complexity Low_complexity 1 29 0 9 689 37 39 0 0 chrUextra 13717235 13717286 -15287370 + AT_rich Low_complexity Low_complexity 1 51 0 9 689 6229 1 3 3 chrUextra 13717716 13718442 -15286214 + SSU-rRNA_Dme rRNA rRNA 1042 1767 -228 9 689 5997 6 0 11 chrUextra 13719368 13720094 -15284562 - LSU-rRNA_Dme rRNA rRNA -2284 1616 899 9 689 5892 0 21 1 chrUextra 13720194 13720920 -15283736 + ROO_I LTR Pao 133 872 -7384 9 689 5945 0 0 0 chrUextra 13721846 13722572 -15282084 - QUASIMODO_I LTR Gypsy -163 5897 5172 9 689 883 152 0 37 chrUextra 13722672 13722863 -15281793 + IDEFIX_I LTR Gypsy 4976 5159 -469 9 689 869 47 0 0 chrUextra 13722892 13722998 -15281658 - DMTOM1_LTR LTR Gypsy -304 106 1 9 689 611 199 15 0 chrUextra 13722998 13723116 -15281540 - ZAM_I LTR Gypsy -6843 647 528 9 689 1381 319 32 28 chrUextra 13723498 13724178 -15280478 + HMSBEAGLE_I LTR Gypsy 3785 4467 -2062 9 689 3584 16 0 2 chrUextra 13724324 13724748 -15279908 + FW_DM LINE Jockey 4270 4692 0 9 689 1151 252 23 23 chrUextra 13724749 13725050 -15279606 + Gypsy3_I LTR Gypsy 4147 4447 -1730 9 689 488 153 24 0 chrUextra 13725210 13725295 -15279361 - NTS_DM Other Other -150 90 4 9 689 1355 6 0 18 chrUextra 13725405 13725570 -15279086 - NTS_DM Other Other -78 162 1 9 689 1851 4 25 13 chrUextra 13725570 13725807 -15278849 - NTS_DM Other Other 0 240 1 9 689 464 0 58 43 chrUextra 13725807 13725876 -15278780 - NTS_DM Other Other 0 240 171 9 689 4179 60 29 1 chrUextra 13725983 13726702 -15277954 + DM297_I LTR Gypsy 3088 3858 -2309 9 689 5774 0 4 65 chrUextra 13726802 13727528 -15277128 + LSU-rRNA_Dme rRNA rRNA 1469 2150 -1750 9 689 208 200 31 0 chrUextra 13728068 13728133 -15276523 + (TAA)n Simple_repeat Simple_repeat 2 68 0 9 689 5809 17 3 32 chrUextra 13728454 13729180 -15275476 - G_DM LINE Jockey -65 4281 3577 9 689 3290 152 25 40 chrUextra 13729280 13730005 -15274651 - SAR_DM Satellite Satellite -504 968 255 9 689 253 26 25 25 chrUextra 13730376 13730416 -15274240 + PROTOP_B DNA P 1 40 -1113 9 689 2233 51 103 0 chrUextra 13730414 13730832 -15273824 + PROTOP_B DNA P 354 749 -404 9 689 6178 1 0 1 chrUextra 13730932 13731658 -15272998 + DM176_I LTR Gypsy 898 1622 -4798 9 689 6562 0 0 1 chrUextra 13731758 13732484 -15272172 + R1_DM LINE R1 1619 2343 -3013 9 689 470 18 0 50 chrUextra 13732587 13732647 -15272009 - NTS_DM Other Other -159 81 25 9 689 21 57 0 0 chrUextra 13732673 13732708 -15271948 + AT_rich Low_complexity Low_complexity 1 35 0 9 689 1304 18 0 6 chrUextra 13732708 13732873 -15271783 - NTS_DM Other Other -39 201 38 9 689 890 18 0 27 chrUextra 13732873 13732985 -15271671 - NTS_DM Other Other -107 133 25 9 689 1304 18 0 6 chrUextra 13733037 13733202 -15271454 - NTS_DM Other Other -39 201 38 9 689 888 28 0 0 chrUextra 13733202 13733310 -15271346 - NTS_DM Other Other -107 133 26 9 689 6442 6 0 1 chrUextra 13735062 13735788 -15268868 - DOC LINE Jockey -1706 3019 2295 9 689 3349 179 10 8 chrUextra 13735889 13736611 -15268045 - SAR_DM Satellite Satellite -526 946 224 9 689 634 148 82 27 chrUextra 13736714 13736860 -15267796 - MDG1_I LTR Gypsy -6442 154 1 9 689 1990 91 74 3 chrUextra 13736860 13737158 -15267498 - MDG1_LTR LTR Gypsy -30 412 94 9 689 372 88 0 0 chrUextra 13737160 13737217 -15267439 + (TTA)n Simple_repeat Simple_repeat 3 59 0 9 689 896 86 56 21 chrUextra 13737245 13737388 -15267268 + DM176_I LTR Gypsy 2360 2507 -3913 9 689 232 67 89 0 chrUextra 13737395 13737440 -15267216 + DM176_I LTR Gypsy 2641 2689 -3731 9 689 28 48 0 0 chrUextra 13737730 13737772 -15266884 + AT_rich Low_complexity Low_complexity 1 42 0 9 689 514 119 36 0 chrUextra 13738045 13738129 -15266527 - NTS_DM Other Other -150 90 4 9 689 5279 2 0 2 chrUextra 13738366 13738945 -15265711 - SSU-rRNA_Dme rRNA rRNA -1417 578 1 9 689 22 56 0 0 chrUextra 13739363 13739399 -15265257 + AT_rich Low_complexity Low_complexity 1 36 0 9 689 6311 1 0 1 chrUextra 13740021 13740744 -15263912 - ROO_I LTR Pao -4608 3648 2927 9 689 3330 0 5 0 chrUextra 13740844 13741213 -15263443 - R1_DM LINE R1 -4985 371 1 9 689 236 36 0 0 chrUextra 13741213 13741241 -15263415 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2605 9 689 3018 0 0 0 chrUextra 13741241 13741570 -15263086 - LSU-rRNA_Dme rRNA rRNA -1247 2653 2325 9 689 6453 0 0 1 chrUextra 13741670 13742396 -15262260 - LSU-rRNA_Dme rRNA rRNA -2757 1143 419 9 689 3945 68 21 24 chrUextra 13742497 13743222 -15261434 - PROTOP DNA P -115 4365 3892 9 689 1601 6 0 0 chrUextra 13743322 13743498 -15261158 - R2_DM LINE R2 -2172 1435 1260 9 689 5011 2 0 0 chrUextra 13743497 13744048 -15260608 - LSU-rRNA_Dme rRNA rRNA -1376 2524 1974 9 689 2617 7 3 0 chrUextra 13744148 13744441 -15260215 + LSU-rRNA_Dme rRNA rRNA 2288 2581 -1319 9 689 3906 7 0 5 chrUextra 13744435 13744874 -15259782 + R2_DM LINE R2 1 437 -3170 9 689 5896 17 4 21 chrUextra 13744974 13745700 -15258956 + IVK_DM LINE I 1341 2054 -3348 9 689 6357 19 0 0 chrUextra 13745800 13746526 -15258130 - R1_DM LINE R1 -2702 2654 1929 9 689 6586 3 0 0 chrUextra 13746626 13747352 -15257304 - MICROPIA_I LTR Gypsy -414 4062 3337 9 689 383 0 0 0 chrUextra 13747452 13747496 -15257160 - LSU-rRNA_Dme rRNA rRNA -3856 44 1 9 689 21 95 0 0 chrUextra 13747508 13747571 -15257085 + AT_rich Low_complexity Low_complexity 1 63 0 9 689 34 24 0 0 chrUextra 13747785 13747826 -15256830 + AT_rich Low_complexity Low_complexity 1 41 0 9 689 22 35 0 0 chrUextra 13748382 13748411 -15256245 + AT_rich Low_complexity Low_complexity 1 29 0 9 689 37 39 0 0 chrUextra 13748512 13748563 -15256093 + AT_rich Low_complexity Low_complexity 1 51 0 9 689 28 48 0 0 chrUextra 13748918 13748960 -15255696 + AT_rich Low_complexity Low_complexity 1 42 0 9 689 565 85 332 19 chrUextra 13749109 13749265 -15255391 + MAX_I LTR Pao 1150 1354 -6560 9 689 3808 72 36 26 chrUextra 13749249 13749830 -15254826 + MAX_I LTR Pao 1217 1803 -6111 9 689 4816 71 43 14 chrUextra 13749930 13750656 -15254000 + TART LINE telomeric 2494 3240 -11237 9 689 1027 37 167 23 chrUextra 13750756 13751055 -15253601 + PROTOP_B DNA P 353 694 -459 9 689 21 0 0 0 chrUextra 13751230 13751251 -15253405 + AT_rich Low_complexity Low_complexity 1 21 0 9 689 3094 196 15 22 chrUextra 13751583 13752307 -15252349 + SAR_DM Satellite Satellite 1 718 -203 9 689 765 46 0 115 chrUextra 13752758 13752880 -15251776 + Baggins1 LINE LOA 5346 5453 0 9 689 6029 26 8 3 chrUextra 13753234 13753960 -15250696 + MDG1_I LTR Gypsy 1668 2397 -4199 9 689 213 39 0 0 chrUextra 13754712 13754738 -15249918 + (TC)n Simple_repeat Simple_repeat 1 26 0 9 689 505 0 138 0 chrUextra 13754889 13755034 -15249622 + (TA)n Simple_repeat Simple_repeat 2 166 0 9 689 2788 39 0 0 chrUextra 13755034 13755370 -15249286 - DM1731_LTR LTR Copia 0 336 1 9 689 2020 4 12 21 chrUextra 13755370 13755612 -15249044 - DM1731_I LTR Copia 0 3976 3737 9 689 6473 0 0 0 chrUextra 13755712 13756438 -15248218 + DM176_I LTR Gypsy 3437 4162 -2258 9 689 4026 180 12 0 chrUextra 13756538 13757264 -15247392 + HETA LINE telomeric 1267 2001 -4080 9 689 3218 178 21 16 chrUextra 13757364 13758090 -15246566 + SAR_DM Satellite Satellite 278 1006 -466 9 689 948 186 28 17 chrUextra 13758195 13758661 -15245995 + SAR_DM Satellite Satellite 1 470 -680 9 689 993 182 25 12 chrUextra 13758672 13758916 -15245740 + SAR_DM Satellite Satellite 539 785 -687 9 689 6498 0 3 0 chrUextra 13759016 13759742 -15244914 - Copia_I LTR Copia -3772 821 94 9 689 6532 6 0 0 chrUextra 13759842 13760568 -15244088 - DMRT1B LINE R1 -3090 2093 1368 9 689 3160 179 13 10 chrUextra 13760669 13761379 -15243277 - SAR_DM Satellite Satellite -602 870 159 9 689 822 120 7 7 chrUextra 13761251 13761394 -15243262 + ARS406_DM Unknown Unknown 1 143 -210 9 689 3458 40 92 0 chrUextra 13761494 13762177 -15242479 + DOC3_DM LINE Jockey 3751 4496 -244 9 689 357 0 0 0 chrUextra 13762174 13762220 -15242436 + DOC3_DM LINE Jockey 4630 4675 -65 9 86 6547 0 1 0 chrUextra 13762320 13763046 -15241610 - DM412 LTR Gypsy -1822 5075 4349 9 690 3504 53 16 150 chrUextra 13763972 13764698 -15239958 + BATUMI_I LTR Pao 141 769 -7194 9 690 6390 16 0 0 chrUextra 13764798 13765524 -15239132 + BATUMI_I LTR Pao 4691 5416 -2547 9 690 2414 102 8 94 chrUextra 13765647 13766350 -15238306 + DMSAT6 Satellite Satellite 1 642 0 9 690 1013 0 0 0 chrUextra 13766452 13766562 -15238094 + LSU-rRNA_Dme rRNA rRNA 3791 3900 0 9 690 22 56 0 0 chrUextra 13766634 13766670 -15237986 + AT_rich Low_complexity Low_complexity 1 36 0 9 690 262 150 0 0 chrUextra 13766675 13766715 -15237941 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 690 262 150 0 0 chrUextra 13766767 13766807 -15237849 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 690 262 150 0 0 chrUextra 13766859 13766899 -15237757 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 690 269 125 0 0 chrUextra 13766942 13766982 -15237674 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 690 22 56 0 0 chrUextra 13766995 13767031 -15237625 + AT_rich Low_complexity Low_complexity 1 36 0 9 690 907 9 0 27 chrUextra 13767057 13767169 -15237487 + NTS_DM Other Other 25 133 -107 9 690 3370 5 3 0 chrUextra 13767276 13767651 -15237005 - SSU-rRNA_Dme rRNA rRNA -1619 376 1 9 690 32 0 0 0 chrUextra 13767783 13767815 -15236841 + AT_rich Low_complexity Low_complexity 1 32 0 9 690 34 24 0 0 chrUextra 13768176 13768217 -15236439 + AT_rich Low_complexity Low_complexity 1 41 0 9 690 1603 5 0 16 chrUextra 13768928 13769118 -15235538 + DIVER_I LTR Pao 5457 5643 0 9 690 2009 5 0 0 chrUextra 13769118 13769342 -15235314 + DIVER_LTR LTR Pao 1 224 0 9 690 2995 3 0 0 chrUextra 13769754 13770082 -15234574 + DIVER_I LTR Pao 5316 5643 0 9 690 2009 5 0 0 chrUextra 13770082 13770306 -15234350 + DIVER_LTR LTR Pao 1 224 0 9 690 1386 0 0 0 chrUextra 13770326 13770480 -15234176 + (TATAA)n Simple_repeat Simple_repeat 2 155 0 9 690 262 150 0 0 chrUextra 13770586 13770626 -15234030 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 690 262 150 0 0 chrUextra 13770678 13770718 -15233938 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 690 230 108 27 0 chrUextra 13770774 13770811 -15233845 - LSU-rRNA_Dme rRNA rRNA -1282 2618 2581 9 690 22 56 0 0 chrUextra 13770816 13770852 -15233804 + AT_rich Low_complexity Low_complexity 1 36 0 9 690 3450 3 3 0 chrUextra 13770924 13771306 -15233350 - LSU-rRNA_Dme rRNA rRNA 0 3900 3518 9 690 1292 275 44 47 chrUextra 13771407 13772132 -15232524 + SAR_DM Satellite Satellite 272 994 -478 9 690 6400 0 0 3 chrUextra 13772232 13772955 -15231701 - LSU-rRNA_Dme rRNA rRNA -2748 1152 432 9 690 2608 3 3 0 chrUextra 13773058 13773360 -15231296 + FW_DM LINE Jockey 4390 4692 0 9 690 5717 10 0 33 chrUextra 13773884 13774610 -15230046 + Invader2_I LTR Gypsy 1419 2120 -2472 9 690 5481 62 18 3 chrUextra 13774711 13775436 -15229220 + QUASIMODO_I LTR Gypsy 85 820 -5240 9 690 5998 13 0 6 chrUextra 13775536 13776219 -15228437 + BATUMI_I LTR Pao 5742 6420 -1543 9 690 3351 176 26 8 chrUextra 13776362 13777088 -15227568 + SAR_DM Satellite Satellite 333 1071 -401 9 690 6639 4 0 0 chrUextra 13777188 13777914 -15226742 + DOC LINE Jockey 2396 3121 -1604 9 690 3041 174 15 20 chrUextra 13778015 13778667 -15225989 - SAR_DM Satellite Satellite -633 839 191 9 690 279 0 0 0 chrUextra 13779535 13779566 -15225090 + (GAGAA)n Simple_repeat Simple_repeat 2 32 0 9 690 3246 191 21 23 chrUextra 13779666 13780388 -15224268 - SAR_DM Satellite Satellite -611 720 1 9 690 3465 176 11 7 chrUextra 13780494 13781205 -15223451 - SAR_DM Satellite Satellite -579 893 180 9 690 769 101 8 0 chrUextra 13781099 13781218 -15223438 + ARS406_DM Unknown Unknown 1 120 -233 9 690 32 0 0 0 chrUextra 13781346 13781378 -15223278 + AT_rich Low_complexity Low_complexity 1 32 0 9 690 4968 2 0 2 chrUextra 13781510 13782044 -15222612 + SSU-rRNA_Dme rRNA rRNA 1 533 -1462 9 690 6725 1 1 0 chrUextra 13782144 13782870 -15221786 + BS2 LINE Jockey 3950 4676 -45 9 690 2655 84 24 21 chrUextra 13782989 13783696 -15220960 + DMSAT6 Satellite Satellite 1 709 0 9 690 32 0 0 0 chrUextra 13783933 13783965 -15220691 + AT_rich Low_complexity Low_complexity 1 32 0 9 690 28 48 0 0 chrUextra 13784293 13784335 -15220321 + AT_rich Low_complexity Low_complexity 1 42 0 9 690 2048 220 64 62 chrUextra 13784622 13785344 -15219312 - Gypsy12_LTR LTR Gypsy -868 1468 746 9 690 459 188 0 0 chrUextra 13785448 13785565 -15219091 + (CTATT)n Simple_repeat Simple_repeat 3 119 0 9 690 4433 21 43 1 chrUextra 13786277 13787000 -15217656 - R1_DM LINE R1 -897 4459 3707 9 690 3417 181 8 8 chrUextra 13787100 13787820 -15216836 - SAR_DM Satellite Satellite -573 899 180 9 690 6715 1 0 1 chrUextra 13787926 13788652 -15216004 - FW_DM LINE Jockey -648 4044 3320 9 690 6019 30 57 0 chrUextra 13788752 13789478 -15215178 - R1_DM LINE R1 -1549 3807 3041 9 690 1415 28 0 6 chrUextra 13789585 13789766 -15214890 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 9 690 1587 67 0 3 chrUextra 13789778 13790105 -15214551 + (GGAGAA)n Simple_repeat Simple_repeat 1 326 0 9 690 315 0 0 167 chrUextra 13790126 13790300 -15214356 + (CGATG)n Simple_repeat Simple_repeat 1 145 0 9 690 1587 4 0 7 chrUextra 13790404 13790676 -15213980 + (GGAGAA)n Simple_repeat Simple_repeat 1 270 0 9 690 435 196 0 0 chrUextra 13790678 13790851 -15213805 + GA-rich Low_complexity Low_complexity 3 175 0 9 690 1439 32 5 0 chrUextra 13790910 13791127 -15213529 + (GGAGAA)n Simple_repeat Simple_repeat 1 217 0 9 690 3323 169 27 18 chrUextra 13791246 13791952 -15212704 + SAR_DM Satellite Satellite 326 1037 -435 9 690 6163 33 0 7 chrUextra 13792056 13792782 -15211874 + MAX_I LTR Pao 2115 2835 -5079 9 690 645 0 0 0 chrUextra 13792882 13792952 -15211704 - LSU-rRNA_Dme rRNA rRNA -3830 70 1 9 690 21 95 0 0 chrUextra 13792964 13793027 -15211629 + AT_rich Low_complexity Low_complexity 1 63 0 9 690 34 24 0 0 chrUextra 13793241 13793282 -15211374 + AT_rich Low_complexity Low_complexity 1 41 0 9 690 2946 0 144 0 chrUextra 13793709 13794057 -15210599 + LSU-rRNA_Dme rRNA rRNA 2235 2632 -1268 9 690 3398 8 5 0 chrUextra 13794057 13794432 -15210224 + R1_DM LINE R1 1 377 -4979 9 690 3233 0 0 65 chrUextra 13794534 13794931 -15209725 - LSU-rRNA_Dme rRNA rRNA -3529 371 1 9 690 21 95 0 0 chrUextra 13794943 13795006 -15209650 + AT_rich Low_complexity Low_complexity 1 63 0 9 690 4071 2 0 53 chrUextra 13795360 13795848 -15208808 - LSU-rRNA_Dme rRNA rRNA -3438 462 1 9 690 21 95 0 0 chrUextra 13795860 13795923 -15208733 + AT_rich Low_complexity Low_complexity 1 63 0 9 690 3159 189 7 19 chrUextra 13796186 13796885 -15207771 + SAR_DM Satellite Satellite 421 1111 -361 9 690 376 196 0 32 chrUextra 13796817 13796912 -15207744 - XDMR_DM Unknown Unknown -9 351 260 9 690 1179 0 0 0 chrUextra 13797012 13797143 -15207513 + (CACAA)n Simple_repeat Simple_repeat 1 131 0 9 690 5371 5 0 0 chrUextra 13797143 13797738 -15206918 - DMRT1B LINE R1 -140 5043 4449 9 690 2668 175 7 10 chrUextra 13797840 13797894 -15206762 - SAR_DM Satellite Satellite -416 721 654 9 690 1103 89 0 0 chrUextra 13797894 13798052 -15206604 + ARS406_DM Unknown Unknown 1 158 -195 9 690 2668 175 7 10 chrUextra 13798052 13798564 -15206092 - SAR_DM Satellite Satellite -416 653 1 9 690 516 241 0 0 chrUextra 13798728 13798902 -15205754 + (TTAA)n Simple_repeat Simple_repeat 2 175 0 9 690 279 125 234 0 chrUextra 13798878 13799134 -15205522 + (CTAAA)n Simple_repeat Simple_repeat 1 316 0 9 690 4608 20 37 0 chrUextra 13799490 13800027 -15204629 - PROTOP_A DNA P -548 557 1 9 690 6407 16 1 1 chrUextra 13800316 13801042 -15203614 - R1_DM LINE R1 -2964 2392 1667 9 690 2242 68 0 4 chrUextra 13801142 13801420 -15203236 + Gypsy12_I LTR Gypsy 5270 5546 0 9 690 2031 185 13 47 chrUextra 13801419 13801867 -15202789 + Gypsy12_LTR LTR Gypsy 1 433 -1903 9 690 3481 173 14 11 chrUextra 13801968 13802694 -15201962 - SAR_DM Satellite Satellite -515 957 230 9 690 982 18 0 0 chrUextra 13802794 13802903 -15201753 + 5S_DM RNA RNA 27 135 0 9 690 1226 15 0 0 chrUextra 13803127 13803262 -15201394 + 5S_DM RNA RNA 1 135 0 9 690 241 0 0 0 chrUextra 13803492 13803520 -15201136 + 5S_DM RNA RNA 1 28 -107 9 690 3081 200 17 23 chrUextra 13803620 13804346 -15200310 + SAR_DM Satellite Satellite 1 721 -225 9 690 6367 7 12 0 chrUextra 13804446 13805172 -15199484 - STALKER4_I LTR Gypsy -2835 3695 2961 9 690 6562 3 0 0 chrUextra 13805272 13805998 -15198658 + R1_DM LINE R1 2400 3125 -2231 9 690 3463 171 13 10 chrUextra 13806098 13806807 -15197849 - SAR_DM Satellite Satellite -436 1036 326 9 690 6447 7 1 3 chrUextra 13806924 13807650 -15197006 - R1_DM LINE R1 -1370 3986 3262 9 690 6682 6 0 1 chrUextra 13807750 13808476 -15196180 - LSU-rRNA_Dme rRNA rRNA -585 3315 2591 9 690 1519 7 0 7 chrUextra 13809021 13809302 -15195354 + (CAAGA)n Simple_repeat Simple_repeat 1 279 0 9 690 6499 14 0 0 chrUextra 13809402 13810128 -15194528 + STALKER4_I LTR Gypsy 1692 2417 -4113 9 690 6734 3 1 0 chrUextra 13810228 13810954 -15193702 - LSU-rRNA_Dme rRNA rRNA -1221 2679 1953 9 690 3852 200 1 0 chrUextra 13811054 13811780 -15192876 - ROVER-I_DM LTR Gypsy -2636 3948 3222 9 690 268 196 0 19 chrUextra 13811943 13811995 -15192661 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 690 268 196 0 19 chrUextra 13812035 13812087 -15192569 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 690 278 176 0 19 chrUextra 13812118 13812170 -15192486 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 690 22 56 0 0 chrUextra 13812183 13812219 -15192437 + AT_rich Low_complexity Low_complexity 1 36 0 9 690 936 9 0 27 chrUextra 13812245 13812357 -15192299 + NTS_DM Other Other 25 133 -107 9 690 1350 18 0 6 chrUextra 13812357 13812522 -15192134 + NTS_DM Other Other 38 201 -39 9 690 199 133 22 22 chrUextra 13812714 13812760 -15191896 + CT-rich Low_complexity Low_complexity 4 49 0 9 690 4719 26 0 0 chrUextra 13813532 13814064 -15190592 - CIRCE LINE Composite -397 5959 5428 9 690 403 136 140 97 chrUextra 13814144 13814258 -15190398 - CIRCE LINE Composite -929 5427 5309 9 690 6197 32 1 0 chrUextra 13814358 13815084 -15189572 + MDG1_I LTR Gypsy 3218 3944 -2652 9 690 4015 5 0 0 chrUextra 13815184 13815619 -15189037 - DOC LINE Jockey -4260 465 31 9 690 1620 12 0 0 chrUextra 13815661 13815910 -15188746 + (TAAA)n Simple_repeat Simple_repeat 1 249 0 9 690 837 79 18 0 chrUextra 13816053 13816167 -15188489 - DMCR1A LINE CR1 -2 4468 4353 9 690 4460 57 18 5 chrUextra 13816169 13816736 -15187920 - DMCR1A LINE CR1 -236 4234 3661 9 690 547 236 0 16 chrUextra 13816837 13816966 -15187690 - ROVER-I_DM LTR Gypsy -3923 2661 2535 9 690 2413 242 15 15 chrUextra 13816955 13817562 -15187094 - ROVER-I_DM LTR Gypsy -4201 2383 1777 9 690 1587 4 0 4 chrUextra 13817670 13817922 -15186734 + (TATAA)n Simple_repeat Simple_repeat 1 250 0 9 690 3296 11 0 0 chrUextra 13817922 13818283 -15186373 + BEL_LTR LTR Pao 1 361 0 9 690 910 0 9 9 chrUextra 13818283 13818388 -15186268 + BEL_I LTR Pao 1 105 -5299 9 690 6230 33 0 0 chrUextra 13818488 13819214 -15185442 - R1_DM LINE R1 -2358 2998 2273 9 690 6356 0 16 0 chrUextra 13819314 13820040 -15184616 + ROO_I LTR Pao 123 860 -7396 9 690 3296 170 16 24 chrUextra 13820143 13820854 -15183802 - SAR_DM Satellite Satellite -577 895 191 9 690 549 202 0 0 chrUextra 13820757 13820866 -15183790 + ARS406_DM Unknown Unknown 1 109 -244 9 690 266 128 0 21 chrUextra 13821067 13821115 -15183541 - HMSBEAGLE_I LTR Gypsy -6308 221 175 9 690 376 49 65 16 chrUextra 13821137 13821199 -15183457 - HMSBEAGLE_I LTR Gypsy -6464 65 1 9 690 984 173 102 15 chrUextra 13821198 13821403 -15183253 - DMLTR5 LTR Gypsy 0 266 44 9 690 6231 26 0 7 chrUextra 13821792 13822518 -15182138 - ROO_I LTR Pao -318 7938 7218 9 690 6676 7 1 0 chrUextra 13822618 13823344 -15181312 - Copia2_I LTR Copia -1861 2301 1575 9 690 3433 180 15 10 chrUextra 13823444 13824168 -15180488 + SAR_DM Satellite Satellite 267 994 -478 9 690 240 172 46 15 chrUextra 13824437 13824502 -15180154 + HMSBEAGLE_I LTR Gypsy 155 221 -6308 9 690 5603 17 24 1 chrUextra 13825096 13825757 -15178899 + R1_DM LINE R1 3411 4086 -1270 9 690 563 30 0 0 chrUextra 13825755 13825821 -15178835 + R1_DM LINE R1 4559 4624 -732 9 690 6207 0 0 36 chrUextra 13825922 13826648 -15178008 - LSU-rRNA_Dme rRNA rRNA -3090 810 111 9 690 6464 6 1 0 chrUextra 13826748 13827474 -15177182 + DM176_I LTR Gypsy 4468 5194 -1226 9 690 2715 119 38 11 chrUextra 13827574 13828298 -15176358 + DMSAT6 Satellite Satellite 1 743 -37 9 690 6566 6 0 1 chrUextra 13828400 13829126 -15175530 + DMRT1B LINE R1 1804 2528 -2655 9 690 430 0 0 57 chrUextra 13829229 13829282 -15175374 - NTS_DM Other Other -166 74 25 9 690 22 56 0 0 chrUextra 13829308 13829344 -15175312 + AT_rich Low_complexity Low_complexity 1 36 0 9 690 248 176 0 38 chrUextra 13829357 13829410 -15175246 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 690 268 196 0 19 chrUextra 13829441 13829493 -15175163 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 690 268 196 0 19 chrUextra 13829524 13829576 -15175080 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 690 268 196 0 19 chrUextra 13829616 13829668 -15174988 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 690 1696 6 0 0 chrUextra 13829769 13829952 -15174704 - LSU-rRNA_Dme rRNA rRNA 0 3900 3718 9 690 4363 78 19 60 chrUextra 13830052 13830730 -15173926 + Gypsy8_I LTR Gypsy 1079 1728 -2619 9 690 268 161 16 31 chrUextra 13830714 13830778 -15173878 - DMSAT6 Satellite Satellite -138 332 270 9 690 6326 21 1 1 chrUextra 13830878 13831604 -15173052 + R1_DM LINE R1 3708 4433 -923 9 690 6472 15 0 0 chrUextra 13831704 13832430 -15172226 - DMRT1B LINE R1 -1618 3565 2840 9 690 6747 0 0 0 chrUextra 13832530 13833255 -15171401 + DMRT1B LINE R1 3448 4172 -1011 9 690 1909 38 0 36 chrUextra 13833356 13833604 -15171052 - NINJA_LTR LTR Pao -78 239 1 9 690 3976 40 0 2 chrUextra 13833604 13834080 -15170576 - NINJA_I LTR Pao 0 6011 5537 9 690 6145 42 1 1 chrUextra 13834180 13834905 -15169751 + R1_DM LINE R1 1089 1813 -3543 9 690 1828 310 10 10 chrUextra 13835009 13835728 -15168928 - ROVER-I_DM LTR Gypsy -4907 1677 959 9 690 6469 4 21 0 chrUextra 13835832 13836555 -15168101 - FW_DM LINE Jockey -2863 1829 1092 9 690 842 10 0 0 chrUextra 13836667 13836763 -15167893 + NTS_DM Other Other 38 133 -107 9 690 1494 25 20 20 chrUextra 13836763 13836966 -15167690 + NTS_DM Other Other 38 240 0 9 690 1858 21 17 17 chrUextra 13836966 13837206 -15167450 + NTS_DM Other Other 1 240 0 9 690 1494 17 0 0 chrUextra 13837206 13837380 -15167276 + NTS_DM Other Other 1 174 -66 9 690 2090 219 97 36 chrUextra 13837480 13838205 -15166451 + Gypsy12_LTR LTR Gypsy 1125 1893 -443 9 690 6398 22 3 0 chrUextra 13838305 13839030 -15165626 - R1_DM LINE R1 -3011 2345 1619 9 690 689 317 20 13 chrUextra 13839504 13839847 -15164809 - GTWIN_I LTR Gypsy -2883 3538 3119 9 690 371 24 0 0 chrUextra 13839956 13839998 -15164658 - MAX_LTR LTR Pao -279 42 1 9 690 2881 40 0 0 chrUextra 13840001 13840349 -15164307 - MAX_I LTR Pao -1 7913 7566 9 690 2996 35 0 0 chrUextra 13840335 13840680 -15163976 - MAX_I LTR Pao -2848 5066 4722 9 690 3088 195 18 27 chrUextra 13840780 13841505 -15163151 + SAR_DM Satellite Satellite 1 718 -203 9 690 4110 18 75 2 chrUextra 13841605 13842221 -15162435 - R1_DM LINE R1 -1436 3920 3260 9 690 970 18 0 0 chrUextra 13842221 13842330 -15162326 + BLOOD_LTR LTR Gypsy 1 109 -290 9 690 692 20 0 0 chrUextra 13842430 13842529 -15162127 + FW_DM LINE Jockey 4591 4689 -3 9 690 3358 36 147 5 chrUextra 13842530 13843155 -15161501 - R1_DM LINE R1 -3966 1390 677 9 690 5651 23 0 7 chrUextra 13843280 13843980 -15160676 - Invader2_I LTR Gypsy 0 4592 3898 9 690 419 41 0 0 chrUextra 13844080 13844129 -15160527 - R1_DM LINE R1 -65 5291 5243 9 690 6038 21 1 0 chrUextra 13844126 13844805 -15159851 - R1_DM LINE R1 -290 5066 4387 9 690 574 0 0 0 chrUextra 13844905 13844972 -15159684 + R2_DM LINE R2 3541 3607 0 9 690 432 41 0 0 chrUextra 13844970 13845019 -15159637 + LSU-rRNA_Dme rRNA rRNA 2578 2626 -1274 9 690 3442 5 0 0 chrUextra 13845016 13845384 -15159272 + R2_DM LINE R2 1921 2288 -1319 9 690 277 176 0 19 chrUextra 13845430 13845482 -15159174 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 690 571 29 0 41 chrUextra 13845557 13845630 -15159026 + NTS_DM Other Other 25 94 -146 9 690 2045 0 0 5 chrUextra 13845730 13845951 -15158705 + ROO_LTR LTR Pao 209 428 0 9 690 4619 0 0 0 chrUextra 13845951 13846455 -15158201 + ROO_I LTR Pao 1 504 -7752 9 690 5220 64 99 7 chrUextra 13846556 13847280 -15157376 + BATUMI_I LTR Pao 1080 1870 -6093 9 690 6470 12 3 1 chrUextra 13847380 13848105 -15156551 + STALKER4_I LTR Gypsy 3885 4610 -1920 9 690 6256 26 0 0 chrUextra 13848205 13848930 -15155726 + TAHRE LINE telomeric 4359 5083 -5380 9 690 251 31 31 0 chrUextra 13849855 13849887 -15154769 - NTS_DM Other Other -207 33 1 9 690 1880 17 17 17 chrUextra 13849887 13850127 -15154529 - NTS_DM Other Other 0 240 1 9 690 1553 10 20 20 chrUextra 13850127 13850330 -15154326 - NTS_DM Other Other 0 240 38 9 690 945 0 0 27 chrUextra 13850330 13850442 -15154214 - NTS_DM Other Other -107 133 25 9 690 21 57 0 0 chrUextra 13850468 13850503 -15154153 + AT_rich Low_complexity Low_complexity 1 35 0 9 690 503 40 0 13 chrUextra 13850503 13850580 -15154076 - NTS_DM Other Other -39 201 126 9 690 6200 26 7 4 chrUextra 13850680 13851405 -15153251 - CIRCE LINE Composite -2707 3649 2923 9 690 6561 11 0 0 chrUextra 13851505 13852230 -15152426 + R1_DM LINE R1 1584 2308 -3048 9 690 6305 17 0 0 chrUextra 13852333 13853055 -15151601 + ROO_I LTR Pao 4754 5475 -2781 9 690 5084 36 48 44 chrUextra 13853155 13853879 -15150777 - PROTOP_A DNA P -39 1066 340 9 690 6452 17 8 0 chrUextra 13853980 13854705 -15149951 - Copia2_I LTR Copia -2096 2066 1336 9 690 6446 6 1 1 chrUextra 13855630 13856355 -15148301 - R1_DM LINE R1 -4034 1322 598 9 690 4794 133 6 0 chrUextra 13856471 13857180 -15147476 - HMSBEAGLE_I LTR Gypsy -4075 2454 1742 9 690 6709 7 0 0 chrUextra 13857280 13858005 -15146651 - Gypsy4_I LTR Gypsy -162 6126 5402 9 690 6574 12 1 0 chrUextra 13858105 13858830 -15145826 + Invader6_I LTR Gypsy 825 1550 -2549 9 690 2535 115 22 14 chrUextra 13858930 13859637 -15145019 - DMSAT6 Satellite Satellite -75 712 1 9 690 1674 0 0 0 chrUextra 13859755 13859936 -15144720 + ACCORD_LTR LTR Gypsy 378 558 0 9 690 2529 40 5 7 chrUextra 13859936 13860480 -15144176 - R1_DM LINE R1 -2227 3129 2554 9 690 6332 1 6 3 chrUextra 13860580 13861305 -15143351 + STALKER4_I LTR Gypsy 1135 1861 -4669 9 690 352 143 0 31 chrUextra 13862230 13862295 -15142361 - DMLTR5 LTR Gypsy -160 106 44 9 690 374 261 114 96 chrUextra 13862505 13862785 -15141871 + Invader1_LTR LTR Gypsy 84 368 -55 9 690 5743 23 1 0 chrUextra 13863055 13863707 -15140949 - R1_DM LINE R1 -298 5058 4406 9 690 458 19 0 0 chrUextra 13863726 13863779 -15140877 - R1_DM LINE R1 -1074 4282 4230 9 690 5954 6 2 10 chrUextra 13863889 13864605 -15140051 + DM412 LTR Gypsy 1 670 -6227 9 690 6308 29 0 0 chrUextra 13864705 13865430 -15139226 - R1_DM LINE R1 -2071 3285 2561 9 690 39 50 0 0 chrUextra 13866023 13866083 -15138573 + AT_rich Low_complexity Low_complexity 1 60 0 9 690 6247 32 1 1 chrUextra 13866355 13867080 -15137576 + R1_DM LINE R1 4214 4938 -418 9 690 4053 24 2 0 chrUextra 13867181 13867645 -15137011 - FW_DM LINE Jockey -988 3704 3240 9 690 2368 11 0 0 chrUextra 13867645 13867905 -15136751 + STALKER4_LTR LTR Gypsy 1 260 -142 9 690 3511 86 13 29 chrUextra 13868008 13868534 -15136122 - Gypsy12_I LTR Gypsy -5028 518 1 9 690 322 137 0 0 chrUextra 13868534 13868585 -15136071 - Gypsy12_LTR LTR Gypsy 0 2336 2286 9 690 315 186 34 34 chrUextra 13868614 13868703 -15135953 - Gypsy12_LTR LTR Gypsy -553 1727 1639 9 690 6103 23 0 6 chrUextra 13868830 13869525 -15135131 + Gypsy12_I LTR Gypsy 1495 2185 -3361 9 690 3082 175 23 29 chrUextra 13869655 13870380 -15134276 - SAR_DM Satellite Satellite -308 1164 444 9 690 6302 28 4 0 chrUextra 13870480 13871205 -15133451 - R1_DM LINE R1 -2098 3258 2531 9 690 4934 98 6 4 chrUextra 13871305 13872030 -15132626 - S_DM DNA Tc1 -1009 727 2 9 690 6590 3 0 0 chrUextra 13872134 13872855 -15131801 + LSU-rRNA_Dme rRNA rRNA 539 1259 -2641 9 690 3391 177 18 8 chrUextra 13872955 13873680 -15130976 - SAR_DM Satellite Satellite -400 1072 341 9 690 6402 28 0 0 chrUextra 13874605 13875330 -15129326 - DIVER_I LTR Pao -3734 1909 1185 9 690 5994 46 11 1 chrUextra 13875430 13876155 -15128501 + R1_DM LINE R1 802 1533 -3823 9 690 6809 1 0 0 chrUextra 13876255 13876980 -15127676 + R2_DM LINE R2 1088 1812 -1795 9 690 4576 98 4 44 chrUextra 13877080 13877786 -15126870 - Gypsy12_I LTR Gypsy -4272 1274 597 9 690 363 347 31 43 chrUextra 13877905 13878302 -15126354 + Gypsy6_I LTR Gypsy 1344 1784 -5228 9 690 6456 1 1 0 chrUextra 13878745 13879455 -15125201 + QUASIMODO_I LTR Gypsy 368 1078 -4982 9 690 3400 178 23 8 chrUextra 13880380 13881105 -15123551 - SAR_DM Satellite Satellite -459 1013 278 9 690 6482 1 1 0 chrUextra 13881205 13881900 -15122756 + R2_DM LINE R2 2910 3605 -2 9 690 255 59 29 0 chrUextra 13881896 13881930 -15122726 + LSU-rRNA_Dme rRNA rRNA 2578 2612 -1288 9 690 812 264 89 8 chrUextra 13882036 13882273 -15122383 - Gypsy4_I LTR Gypsy -4001 2287 2032 9 690 4013 12 95 8 chrUextra 13882270 13882755 -15121901 + CIRCE LINE Composite 3515 4041 -2315 9 690 6594 1 0 0 chrUextra 13882862 13883580 -15121076 - FW_DM LINE Jockey -2987 1705 988 9 690 4246 97 4 7 chrUextra 13883681 13884399 -15120257 - G_DM LINE Jockey -948 1094 396 9 690 6534 17 0 3 chrUextra 13884508 13885230 -15119426 + MAX_I LTR Pao 6021 6740 -1174 9 690 6374 8 1 7 chrUextra 13885330 13886055 -15118601 + LSU-rRNA_Dme rRNA rRNA 590 1310 -2590 9 690 358 218 0 19 chrUextra 13886155 13886258 -15118398 + XDMR_DM Unknown Unknown 260 360 0 9 690 3159 190 7 18 chrUextra 13886172 13886880 -15117776 - SAR_DM Satellite Satellite -353 1119 420 9 690 6377 10 3 0 chrUextra 13886980 13887705 -15116951 + STALKER4_I LTR Gypsy 2226 2952 -3578 9 690 1780 19 0 10 chrUextra 13887808 13888016 -15116640 + QUASIMODO_LTR LTR Gypsy 402 607 -51 9 690 3639 76 24 10 chrUextra 13888023 13888530 -15116126 + QUASIMODO_I LTR Gypsy 30 543 -5517 9 690 3435 173 8 10 chrUextra 13888632 13889355 -15115301 + SAR_DM Satellite Satellite 247 968 -504 9 690 2663 176 11 13 chrUextra 13889459 13890178 -15114478 + BATUMI_I LTR Pao 4010 4802 -3112 9 690 6387 1 0 0 chrUextra 13891105 13891830 -15112826 + LSU-rRNA_Dme rRNA rRNA 246 970 -2930 9 690 2554 176 11 8 chrUextra 13891932 13892625 -15112031 + SAR_DM Satellite Satellite 1 694 -677 9 690 255 150 0 0 chrUextra 13892615 13892655 -15112001 - XDMR_DM Unknown Unknown -280 80 41 9 690 680 185 7 15 chrUextra 13892755 13892892 -15111764 - HETRP_DM Satellite Satellite -208 1664 1529 9 690 554 194 24 16 chrUextra 13893050 13893176 -15111480 - HETRP_DM Satellite Satellite -197 1675 1549 9 690 192 40 0 0 chrUextra 13893176 13893201 -15111455 + (TC)n Simple_repeat Simple_repeat 2 26 0 9 690 680 193 14 14 chrUextra 13893327 13893474 -15111182 - HETRP_DM Satellite Satellite -197 1675 1529 9 86 851 0 0 0 chrUextra 13893601 13893697 -15110959 - NTS_DM Other Other -107 133 38 9 691 840 9 9 36 chrUextra 13893697 13893809 -15110847 - NTS_DM Other Other -107 133 25 9 691 21 57 0 0 chrUextra 13893835 13893870 -15110786 + AT_rich Low_complexity Low_complexity 1 35 0 9 691 1304 18 0 6 chrUextra 13893870 13894035 -15110621 - NTS_DM Other Other -39 201 38 9 691 907 9 0 27 chrUextra 13894035 13894147 -15110509 - NTS_DM Other Other -107 133 25 9 691 698 38 0 9 chrUextra 13894199 13894305 -15110351 - NTS_DM Other Other -39 201 97 9 691 5787 42 1 12 chrUextra 13894408 13895130 -15109526 - R1_DM LINE R1 -3951 1405 692 9 691 1611 11 0 0 chrUextra 13895230 13895519 -15109137 + (TCTTG)n Simple_repeat Simple_repeat 1 289 0 9 691 6084 21 15 1 chrUextra 13896055 13896780 -15107876 + R1_DM LINE R1 3462 4196 -1160 9 691 2796 62 5 19 chrUextra 13897230 13897605 -15107051 - Baggins1 LINE LOA -262 5191 4822 9 691 3173 186 6 6 chrUextra 13897705 13898397 -15106259 - SAR_DM Satellite Satellite -589 883 192 9 691 833 94 8 0 chrUextra 13898302 13898430 -15106226 + ARS406_DM Unknown Unknown 1 129 -224 9 691 1477 0 0 0 chrUextra 13898530 13898702 -15105954 - QUASIMODO_LTR LTR Gypsy -486 172 1 9 691 4500 4 0 0 chrUextra 13898702 13899255 -15105401 - QUASIMODO_I LTR Gypsy 0 6060 5508 9 691 2359 4 4 0 chrUextra 13899355 13899617 -15105039 + TRANSPAC_LTR LTR Gypsy 68 330 0 9 691 3997 9 4 2 chrUextra 13899617 13900080 -15104576 + TRANSPAC_I LTR Gypsy 1 464 -4126 9 691 3272 165 34 18 chrUextra 13900181 13900897 -15103759 + SAR_DM Satellite Satellite 385 1111 -361 9 691 240 143 66 79 chrUextra 13900829 13900905 -15103751 - XDMR_DM Unknown Unknown -9 351 277 9 691 3502 216 1 0 chrUextra 13901006 13901730 -15102926 + ROVER-I_DM LTR Gypsy 2092 2816 -3768 9 691 6613 0 1 0 chrUextra 13901832 13902555 -15102101 - SSU-rRNA_Dme rRNA rRNA -1035 960 237 9 691 5709 10 80 1 chrUextra 13902655 13903379 -15101277 - DM176_I LTR Gypsy -4348 2072 1292 9 691 278 0 0 0 chrUextra 13903480 13903520 -15101136 + R2_DM LINE R2 3566 3605 -2 9 691 3909 5 0 0 chrUextra 13903516 13903949 -15100707 + LSU-rRNA_Dme rRNA rRNA 2578 3010 -890 9 691 6235 26 0 0 chrUextra 13904305 13905030 -15099626 + R1_DM LINE R1 1609 2333 -3023 9 691 6103 29 10 1 chrUextra 13905130 13905855 -15098801 - NINJA_I LTR Pao -2134 3877 3147 9 691 6442 3 1 1 chrUextra 13905955 13906680 -15097976 + R1_DM LINE R1 3509 4233 -1123 9 691 3164 178 8 22 chrUextra 13906780 13907491 -15097165 + SAR_DM Satellite Satellite 418 1118 -354 9 691 586 62 0 0 chrUextra 13907605 13907686 -15096970 + PROTOP_B DNA P 398 478 -675 9 691 4682 70 0 3 chrUextra 13907663 13908282 -15096374 + HOBO DNA hAT 330 946 -2070 9 691 316 24 24 0 chrUextra 13908287 13908329 -15096327 + HOBO DNA hAT 1100 1142 -1874 9 691 3113 191 7 8 chrUextra 13908434 13909136 -15095520 - SAR_DM Satellite Satellite -577 895 195 9 691 675 134 0 0 chrUextra 13909043 13909155 -15095501 + ARS406_DM Unknown Unknown 1 112 -241 9 691 6054 14 41 0 chrUextra 13909255 13909980 -15094676 + R1_DM LINE R1 323 1077 -4279 9 691 3105 181 9 10 chrUextra 13910082 13910768 -15093888 - SAR_DM Satellite Satellite -593 879 195 9 691 807 108 8 0 chrUextra 13910675 13910805 -15093851 + ARS406_DM Unknown Unknown 1 131 -222 9 691 3361 168 14 14 chrUextra 13910905 13911619 -15093037 + SAR_DM Satellite Satellite 224 937 -535 9 691 5486 43 15 32 chrUextra 13911730 13912455 -15092201 + DMCR1A LINE CR1 3371 4083 -387 9 691 813 53 115 0 chrUextra 13912555 13912668 -15091988 + Gypsy6_I LTR Gypsy 147 272 -6740 9 691 5493 10 0 0 chrUextra 13912671 13913280 -15091376 + Gypsy6_I LTR Gypsy 3058 3666 -3346 9 691 3191 183 25 10 chrUextra 13913382 13914100 -15090556 + SAR_DM Satellite Satellite 340 1068 -404 9 691 1949 29 0 55 chrUextra 13914676 13914930 -15089726 - Baggins1 LINE LOA 0 5453 5214 9 691 6193 12 1 3 chrUextra 13915855 13916580 -15088076 + ROO_I LTR Pao 2487 3210 -5046 9 691 3744 45 47 2 chrUextra 13916729 13917219 -15087437 + PROTOP DNA P 1 512 -3968 9 691 26 64 0 0 chrUextra 13917358 13917405 -15087251 + AT_rich Low_complexity Low_complexity 1 47 0 9 691 6356 11 1 6 chrUextra 13918330 13919055 -15085601 - MICROPIA_I LTR Gypsy -1037 3439 2718 9 691 4805 46 64 8 chrUextra 13919157 13919880 -15084776 + STALKER4_I LTR Gypsy 5626 6388 -142 9 691 3347 177 10 10 chrUextra 13919980 13920705 -15083951 + SAR_DM Satellite Satellite 352 1076 -396 9 691 21 89 0 0 chrUextra 13921228 13921284 -15083372 + AT_rich Low_complexity Low_complexity 1 56 0 9 691 2013 13 0 0 chrUextra 13921303 13921529 -15083127 - SSU-rRNA_Dme rRNA rRNA 0 1995 1770 9 691 6238 7 0 0 chrUextra 13921630 13922355 -15082301 + DM297_I LTR Gypsy 1370 2094 -4073 9 691 717 342 77 27 chrUextra 13922624 13923180 -15081476 + MICROPIA_I LTR Gypsy 1 584 -3892 9 691 3555 228 38 48 chrUextra 13923281 13924797 -15079859 - SAR_DM Satellite Satellite -478 1500 1 9 691 782 103 8 0 chrUextra 13924704 13924830 -15079826 + ARS406_DM Unknown Unknown 1 127 -226 9 691 6166 17 1 0 chrUextra 13924930 13925655 -15079001 + STALKER4_I LTR Gypsy 2216 2941 -3589 9 691 1599 6 0 0 chrUextra 13925755 13925933 -15078723 + DOC LINE Jockey 1818 1995 -2730 9 691 4884 6 0 0 chrUextra 13925933 13926480 -15078176 + DOC LINE Jockey 2474 3020 -1705 9 691 6075 33 1 3 chrUextra 13926585 13927305 -15077351 + BATUMI_I LTR Pao 4315 5033 -2930 9 691 6325 7 0 1 chrUextra 13928230 13928955 -15075701 + STALKER4_I LTR Gypsy 1373 2096 -4434 9 691 6390 1 0 0 chrUextra 13929059 13929780 -15074876 - ROO_I LTR Pao -2702 5554 4834 9 691 3583 2 0 2 chrUextra 13929880 13930287 -15074369 + DM176_LTR LTR Gypsy 102 507 0 9 691 6463 1 6 0 chrUextra 13930705 13931430 -15073226 + FW_DM LINE Jockey 290 1018 -3674 9 691 728 104 250 0 chrUextra 13931550 13931694 -15072962 + FB4_DM DNA Tc1 3 182 -3907 9 691 261 33 0 0 chrUextra 13931702 13931732 -15072924 - Baggins1 LINE LOA -697 4756 4727 9 691 5336 90 0 0 chrUextra 13932355 13933080 -15071576 + S_DM DNA Tc1 326 1050 -686 9 691 6391 6 0 0 chrUextra 13933183 13933905 -15070751 - QUASIMODO_I LTR Gypsy -2726 3334 2613 9 691 28 48 0 0 chrUextra 13934293 13934335 -15070321 + AT_rich Low_complexity Low_complexity 1 42 0 9 691 32 0 0 0 chrUextra 13934664 13934696 -15069960 + AT_rich Low_complexity Low_complexity 1 32 0 9 691 2871 6 0 0 chrUextra 13934830 13935154 -15069502 - DM176_LTR LTR Gypsy -183 324 1 9 691 1873 133 51 33 chrUextra 13935154 13935555 -15069101 - STALKER4_I LTR Gypsy -5646 884 427 9 691 5634 3 6 66 chrUextra 13935655 13936380 -15068276 + LSU-rRNA_Dme rRNA rRNA 1262 1942 -1958 9 691 24 0 0 0 chrUextra 13936575 13936599 -15068057 + AT_rich Low_complexity Low_complexity 1 24 0 9 691 1655 28 104 0 chrUextra 13937305 13937368 -15067288 + Stalker3_LTR LTR Gypsy 139 201 -171 9 691 207 0 0 0 chrUextra 13937368 13937391 -15067265 + (ATAAG)n Simple_repeat Simple_repeat 2 24 0 9 691 1655 28 104 0 chrUextra 13937391 13937539 -15067117 + Stalker3_LTR LTR Gypsy 202 370 -2 9 691 294 43 87 0 chrUextra 13937539 13937585 -15067071 + Stalker2_I LTR Gypsy 1 50 -7352 9 691 1202 182 32 0 chrUextra 13937778 13938030 -15066626 + Stalker2_I LTR Gypsy 242 501 -6901 9 691 5476 28 1 11 chrUextra 13938140 13938855 -15065801 + DM176_I LTR Gypsy 1 708 -5712 9 691 5214 46 8 0 chrUextra 13939782 13940451 -15064205 + IDEFIX_I LTR Gypsy 191 864 -4764 9 691 287 54 0 0 chrUextra 13940468 13940505 -15064151 + IDEFIX_I LTR Gypsy 2190 2226 -3402 9 691 6505 11 0 1 chrUextra 13940605 13941330 -15063326 - R2_DM LINE R2 -1457 2150 1427 9 691 2807 174 127 10 chrUextra 13941436 13942155 -15062501 + HETA LINE telomeric 4553 5355 -726 9 691 514 119 36 0 chrUextra 13942516 13942600 -15062056 - NTS_DM Other Other -150 90 4 9 691 1345 6 0 18 chrUextra 13942710 13942875 -15061781 - NTS_DM Other Other -78 162 1 9 691 704 10 39 29 chrUextra 13942875 13942979 -15061677 - NTS_DM Other Other 0 240 136 9 691 5717 18 8 1 chrUextra 13943080 13943805 -15060851 + STALKER4_I LTR Gypsy 5770 6499 -31 9 691 674 0 0 12 chrUextra 13943905 13943986 -15060670 - DMRT1B LINE R1 -2726 2457 2378 9 691 5101 36 2 3 chrUextra 13943990 13944630 -15060026 + R1_DM LINE R1 4583 5221 -135 9 691 2310 188 104 21 chrUextra 13944731 13945444 -15059212 - Gypsy12_LTR LTR Gypsy -298 2038 1267 9 691 841 31 0 142 chrUextra 13945555 13945703 -15058953 - CIRCE LINE Composite -4925 1431 1305 9 691 512 318 26 26 chrUextra 13945560 13945828 -15058828 - Gypsy12_I LTR Gypsy -2191 3355 3088 9 691 2276 59 0 75 chrUextra 13945769 13946115 -15058541 - CIRCE LINE Composite -5064 1292 973 9 691 5888 8 3 0 chrUextra 13947205 13947930 -15056726 + STALKER4_I LTR Gypsy 2762 3488 -3042 9 691 356 235 36 73 chrUextra 13948293 13948458 -15056198 + MDG3_I LTR Gypsy 3179 3337 -1649 9 691 635 96 0 0 chrUextra 13948661 13948755 -15055901 + PROTOP_B DNA P 1 94 -1059 9 691 6201 6 1 0 chrUextra 13948855 13949580 -15055076 + R1_DM LINE R1 4487 5212 -144 9 691 4952 102 0 1 chrUextra 13949684 13950404 -15054252 - Gypsy12_I LTR Gypsy -1308 4238 3520 9 691 3281 211 4 6 chrUextra 13950505 13951226 -15053430 - ROVER-I_DM LTR Gypsy -3605 2979 2260 9 691 5846 30 0 0 chrUextra 13951329 13952053 -15052603 - R1_DM LINE R1 -2066 3290 2567 9 691 5774 1 0 35 chrUextra 13952153 13952877 -15051779 - LSU-rRNA_Dme rRNA rRNA -3104 796 98 9 691 6318 0 1 1 chrUextra 13952977 13953701 -15050955 - LSU-rRNA_Dme rRNA rRNA -32 3868 3145 9 691 43 0 0 0 chrUextra 13954303 13954346 -15050310 + AT_rich Low_complexity Low_complexity 1 43 0 9 691 3137 171 8 19 chrUextra 13954625 13955348 -15049308 + SAR_DM Satellite Satellite 389 1103 -369 9 691 488 119 36 0 chrUextra 13955647 13955731 -15048925 - NTS_DM Other Other -150 90 4 9 691 1301 6 0 18 chrUextra 13955841 13956006 -15048650 - NTS_DM Other Other -78 162 1 9 691 1148 6 30 18 chrUextra 13956006 13956173 -15048483 - NTS_DM Other Other 0 240 72 9 691 6093 12 0 0 chrUextra 13956275 13956997 -15047659 - STALKER4_I LTR Gypsy -4116 2414 1693 9 691 1950 213 72 54 chrUextra 13957112 13957821 -15046835 - Gypsy12_LTR LTR Gypsy -778 1558 837 9 691 5990 22 8 0 chrUextra 13957921 13958645 -15046011 + FW_DM LINE Jockey 1869 2598 -2094 9 691 5485 32 1 15 chrUextra 13958745 13959469 -15045187 - BATUMI_I LTR Pao -4570 3393 2680 9 691 2954 175 10 15 chrUextra 13959574 13960287 -15044369 + SAR_DM Satellite Satellite 195 903 -569 9 691 6061 4 0 0 chrUextra 13960393 13961117 -15043539 - ROO_I LTR Pao -3076 5180 4457 9 691 1055 192 34 59 chrUextra 13961220 13961574 -15043082 - Gypsy_LTR LTR Gypsy -137 345 1 9 691 1850 0 0 0 chrUextra 13962041 13962252 -15042404 + LSU-rRNA_Dme rRNA rRNA 3690 3900 0 9 691 22 56 0 0 chrUextra 13962324 13962360 -15042296 + AT_rich Low_complexity Low_complexity 1 36 0 9 691 246 150 0 0 chrUextra 13962365 13962405 -15042251 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 691 246 150 0 0 chrUextra 13962457 13962497 -15042159 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 691 246 150 0 0 chrUextra 13962549 13962589 -15042067 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 691 255 125 0 0 chrUextra 13962632 13962672 -15041984 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 691 22 56 0 0 chrUextra 13962685 13962721 -15041935 + AT_rich Low_complexity Low_complexity 1 36 0 9 691 728 22 22 0 chrUextra 13962867 13962958 -15041698 - Baggins1 LINE LOA -15 5438 5346 9 691 27 29 0 0 chrUextra 13963281 13963315 -15041341 + AT_rich Low_complexity Low_complexity 1 34 0 9 691 250 33 0 0 chrUextra 13963554 13963584 -15041072 + Baggins1 LINE LOA 4727 4756 -697 9 691 1531 217 84 27 chrUextra 13963689 13964397 -15040259 - SAR_DM Satellite Satellite -484 748 1 9 691 1900 0 0 5 chrUextra 13964552 13964775 -15039881 - LSU-rRNA_Dme rRNA rRNA -3678 222 1 9 691 21 95 0 0 chrUextra 13964787 13964850 -15039806 + AT_rich Low_complexity Low_complexity 1 63 0 9 691 34 24 0 0 chrUextra 13965063 13965104 -15039552 + AT_rich Low_complexity Low_complexity 1 41 0 9 691 5756 39 0 4 chrUextra 13965337 13966061 -15038595 - BATUMI_I LTR Pao -2690 5273 4553 9 691 277 106 21 0 chrUextra 13966231 13966278 -15038378 - NTS_DM Other Other -192 48 1 9 691 406 135 53 38 chrUextra 13966278 13966409 -15038247 - NTS_DM Other Other 0 240 108 9 691 776 123 0 0 chrUextra 13966417 13966547 -15038109 - NTS_DM Other Other -103 137 8 9 691 259 146 21 0 chrUextra 13966645 13966693 -15037963 - NTS_DM Other Other -191 49 1 9 691 790 138 19 6 chrUextra 13966724 13966885 -15037771 - NTS_DM Other Other -35 205 43 9 691 6364 0 1 0 chrUextra 13966985 13967709 -15036947 + R2_DM LINE R2 1809 2533 -1074 9 691 5179 23 4 52 chrUextra 13967809 13968533 -15036123 - BATUMI_I LTR Pao -4931 3032 2344 9 691 2453 3 3 0 chrUextra 13969073 13969357 -15035299 - SSU-rRNA_Dme rRNA rRNA 0 1995 1711 9 691 2606 209 18 24 chrUextra 13969461 13970181 -15034475 + SAR_DM Satellite Satellite 1 715 -208 9 691 3114 166 13 8 chrUextra 13970282 13970985 -15033671 + SAR_DM Satellite Satellite 371 1076 -396 9 691 6107 0 0 1 chrUextra 13971105 13971829 -15032827 + ROO_I LTR Pao 4221 4943 -3313 9 691 22 35 0 0 chrUextra 13971959 13971988 -15032668 + AT_rich Low_complexity Low_complexity 1 29 0 9 691 51 31 0 0 chrUextra 13972164 13972229 -15032427 + AT_rich Low_complexity Low_complexity 1 65 0 9 691 6130 8 0 7 chrUextra 13972753 13973477 -15031179 + NINJA_I LTR Pao 3044 3762 -2249 9 691 739 78 243 0 chrUextra 13973619 13973833 -15030823 - Invader2_LTR LTR Gypsy 0 266 1 9 691 1070 143 306 14 chrUextra 13973833 13974123 -15030533 - HMSBEAGLE_I LTR Gypsy -356 6173 5797 9 691 959 114 48 0 chrUextra 13974134 13974301 -15030355 - HMSBEAGLE_I LTR Gypsy -901 5628 5454 9 691 530 16 0 0 chrUextra 13974401 13974463 -15030193 - NTS_DM Other Other -178 62 1 9 691 1744 21 17 17 chrUextra 13974463 13974703 -15029953 - NTS_DM Other Other 0 240 1 9 691 1756 17 17 17 chrUextra 13974703 13974943 -15029713 - NTS_DM Other Other 0 240 1 9 691 1213 17 22 22 chrUextra 13974943 13975125 -15029531 - NTS_DM Other Other 0 240 59 9 691 436 0 0 0 chrUextra 13975513 13975563 -15029093 - CIRCE LINE Composite -1376 4980 4931 9 691 3029 31 47 0 chrUextra 13975563 13975949 -15028707 + R1_DM LINE R1 2277 2680 -2676 9 691 2647 25 0 0 chrUextra 13976050 13976368 -15028288 - CIRCE LINE Composite -611 5745 5428 9 691 2286 27 3 53 chrUextra 13976455 13976773 -15027883 - CIRCE LINE Composite -929 5427 5126 9 691 6170 7 0 0 chrUextra 13976873 13977593 -15027063 + DM1731_I LTR Copia 133 852 -3124 9 691 5848 14 0 0 chrUextra 13977697 13978421 -15026235 - STALKER4_I LTR Gypsy -252 6278 5555 9 691 6092 12 1 0 chrUextra 13978521 13979245 -15025411 - DOC2_DM LINE Jockey -123 4670 3946 9 691 3164 180 8 8 chrUextra 13979345 13980069 -15024587 - SAR_DM Satellite Satellite -496 976 253 9 691 1193 40 0 0 chrUextra 13980170 13980320 -15024336 - PROTOP_B DNA P -930 223 74 9 691 5752 43 0 4 chrUextra 13980993 13981717 -15022939 + BATUMI_I LTR Pao 5080 5800 -2163 9 691 2660 196 10 18 chrUextra 13981817 13982486 -15022170 - SAR_DM Satellite Satellite -673 663 1 9 691 435 36 0 0 chrUextra 13982485 13982541 -15022115 + ARS406_DM Unknown Unknown 90 145 -208 9 691 3547 18 31 9 chrUextra 13982641 13983088 -15021568 + CIRCE LINE Composite 3917 4373 -1983 9 691 1681 67 26 42 chrUextra 13983088 13983353 -15021303 + ROVER-LTR_DM LTR Gypsy 1 261 -106 9 691 6098 6 1 1 chrUextra 13983465 13984189 -15020467 - G_DM LINE Jockey -2126 2220 1497 9 691 6031 1 15 0 chrUextra 13984289 13985013 -15019643 - STALKER4_I LTR Gypsy -1182 5348 4614 9 691 6211 4 0 1 chrUextra 13985113 13985837 -15018819 - R1_DM LINE R1 -2692 2664 1942 9 691 6136 3 3 3 chrUextra 13985940 13986661 -15017995 - LSU-rRNA_Dme rRNA rRNA -2220 1680 960 9 691 25 83 0 0 chrUextra 13987348 13987408 -15017248 + AT_rich Low_complexity Low_complexity 1 60 0 9 691 5721 40 0 3 chrUextra 13987585 13988306 -15016350 - BATUMI_I LTR Pao -2930 5033 4315 9 691 6134 8 1 1 chrUextra 13988409 13989129 -15015527 + SSU-rRNA_Dme rRNA rRNA 584 1303 -692 9 691 1196 43 0 6 chrUextra 13989233 13989398 -15015258 + IDEFIX_I LTR Gypsy 118 281 -5347 9 691 488 303 17 11 chrUextra 13989739 13989916 -15014740 + TOM_I LTR Gypsy 418 595 -5517 9 691 5129 3 0 0 chrUextra 13990191 13990781 -15013875 - LSU-rRNA_Dme rRNA rRNA -978 2922 2333 9 691 6170 12 0 0 chrUextra 13990881 13991605 -15013051 + Copia2_I LTR Copia 1432 2155 -2007 9 691 2905 187 20 22 chrUextra 13991706 13992428 -15012228 - SAR_DM Satellite Satellite -602 720 1 9 691 6266 1 0 0 chrUextra 13992529 13993253 -15011403 - DOC LINE Jockey -1397 3328 2605 9 691 2885 191 10 11 chrUextra 13993355 13994075 -15010581 + SAR_DM Satellite Satellite 185 903 -569 9 691 637 35 0 44 chrUextra 13994177 13994268 -15010388 - NTS_DM Other Other -129 111 25 9 691 1174 36 0 12 chrUextra 13994320 13994486 -15010170 - NTS_DM Other Other -39 201 38 9 691 845 18 0 27 chrUextra 13994486 13994598 -15010058 - NTS_DM Other Other -107 133 25 9 691 1230 30 0 6 chrUextra 13994650 13994815 -15009841 - NTS_DM Other Other -39 201 38 9 691 623 25 0 0 chrUextra 13994815 13994895 -15009761 - NTS_DM Other Other -107 133 54 9 691 3713 0 2 0 chrUextra 13995001 13995426 -15009230 + LSU-rRNA_Dme rRNA rRNA 3475 3900 0 9 691 29 28 0 0 chrUextra 13995498 13995534 -15009122 + AT_rich Low_complexity Low_complexity 1 36 0 9 691 246 150 0 0 chrUextra 13995539 13995579 -15009077 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 691 246 150 0 0 chrUextra 13995631 13995671 -15008985 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 691 6243 7 0 0 chrUextra 13995825 13996549 -15008107 + FW_DM LINE Jockey 3410 4133 -559 9 691 6159 1 1 4 chrUextra 13997473 13998197 -15006459 + G2_DM LINE Jockey 1105 1826 -1276 9 691 3800 92 11 5 chrUextra 13998297 13998862 -15005794 - TART LINE telomeric -3854 10623 10056 9 691 1092 55 30 30 chrUextra 13998853 13999021 -15005635 - TART LINE telomeric -4530 9947 9780 9 691 3830 108 18 6 chrUextra 13999121 13999843 -15004813 + Gypsy12_I LTR Gypsy 3704 4493 -1053 9 691 474 0 0 0 chrUextra 13999945 14000000 -15004656 + SSU-rRNA_Dme rRNA rRNA 1815 1869 -126 9 691 1108 8 0 8 chrUextra 14000000 14000127 -15004529 + SSU-rRNA_Dme rRNA rRNA 1870 1995 0 9 691 21 89 0 0 chrUextra 14000146 14000202 -15004454 + AT_rich Low_complexity Low_complexity 1 56 0 9 691 2391 0 0 0 chrUextra 14001593 14001857 -15002799 + LSU-rRNA_Dme rRNA rRNA 2255 2518 -1382 9 691 4046 5 0 2 chrUextra 14001870 14002317 -15002339 + R2_DM LINE R2 2 447 -3160 9 691 2387 0 0 0 chrUextra 14002417 14002680 -15001976 + LSU-rRNA_Dme rRNA rRNA 3638 3900 0 9 691 22 56 0 0 chrUextra 14002757 14002793 -15001863 + AT_rich Low_complexity Low_complexity 1 36 0 9 691 262 150 0 0 chrUextra 14002798 14002838 -15001818 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 691 262 150 0 0 chrUextra 14002890 14002930 -15001726 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 691 262 150 0 0 chrUextra 14002982 14003022 -15001634 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 691 244 150 0 0 chrUextra 14003065 14003105 -15001551 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 691 3443 168 14 14 chrUextra 14003241 14003965 -15000691 - SAR_DM Satellite Satellite -450 1022 299 9 691 2742 202 16 23 chrUextra 14004094 14004787 -14999869 + SAR_DM Satellite Satellite 472 1159 -313 9 691 1620 21 0 2 chrUextra 14004889 14005364 -14999292 + (CACAA)n Simple_repeat Simple_repeat 1 474 0 9 691 2623 0 3 74 chrUextra 14005713 14006049 -14998607 - LSU-rRNA_Dme rRNA rRNA -3588 312 1 9 691 21 95 0 0 chrUextra 14006061 14006124 -14998532 + AT_rich Low_complexity Low_complexity 1 63 0 9 691 34 24 0 0 chrUextra 14006337 14006378 -14998278 + AT_rich Low_complexity Low_complexity 1 41 0 9 691 2923 199 36 21 chrUextra 14006537 14007257 -14997399 - SAR_DM Satellite Satellite -603 730 1 9 691 365 24 0 0 chrUextra 14007361 14007403 -14997253 - NTS_DM Other Other -161 79 38 9 691 851 0 0 0 chrUextra 14007403 14007499 -14997157 - NTS_DM Other Other -107 133 38 9 691 870 9 9 27 chrUextra 14007499 14007610 -14997046 - NTS_DM Other Other -107 133 25 9 691 21 57 0 0 chrUextra 14007636 14007671 -14996985 + AT_rich Low_complexity Low_complexity 1 35 0 9 691 1304 18 0 6 chrUextra 14007671 14007836 -14996820 - NTS_DM Other Other -39 201 38 9 691 890 18 0 27 chrUextra 14007836 14007948 -14996708 - NTS_DM Other Other -107 133 25 9 691 563 36 0 12 chrUextra 14008000 14008085 -14996571 - NTS_DM Other Other -39 201 118 9 691 3299 172 10 14 chrUextra 14008202 14008909 -14995747 + SAR_DM Satellite Satellite 326 1029 -443 9 691 36 55 0 52 chrUextra 14009204 14009320 -14995336 + AT_rich Low_complexity Low_complexity 1 110 0 9 691 3089 3 0 0 chrUextra 14009393 14009733 -14994923 + SSU-rRNA_Dme rRNA rRNA 1 340 -1655 9 691 1980 178 7 7 chrUextra 14009839 14010554 -14994102 + SAR_DM Satellite Satellite 1 715 -836 9 691 2463 99 14 24 chrUextra 14010664 14011380 -14993276 + DMSAT6 Satellite Satellite 1 708 -3 9 691 610 266 18 22 chrUextra 14011481 14011708 -14992948 - QUASIMODO_I LTR Gypsy -308 5752 5527 9 691 2308 68 240 2 chrUextra 14011700 14012201 -14992455 + PROTOP DNA P 176 865 -3615 9 691 4517 0 0 2 chrUextra 14012305 14012804 -14991852 + R1_DM LINE R1 4859 5356 0 9 691 2044 9 0 0 chrUextra 14012802 14013029 -14991627 + LSU-rRNA_Dme rRNA rRNA 2640 2866 -1034 9 691 5881 7 25 4 chrUextra 14013130 14013853 -14990803 - STALKER4_I LTR Gypsy -160 6370 5633 9 691 1576 50 171 109 chrUextra 14013953 14014310 -14990346 + ROO_I LTR Pao 516 894 -7362 9 691 3209 26 0 0 chrUextra 14014299 14014677 -14989979 + ROO_I LTR Pao 1303 1680 -6576 9 691 3232 178 13 11 chrUextra 14014782 14015494 -14989162 - SAR_DM Satellite Satellite -514 958 246 9 691 237 152 0 0 chrUextra 14015455 14015501 -14989155 + ARS406_DM Unknown Unknown 2 47 -306 9 691 6471 1 0 0 chrUextra 14016425 14017149 -14987507 - LSU-rRNA_Dme rRNA rRNA -2656 1244 521 9 691 1268 18 0 18 chrUextra 14017291 14017458 -14987198 - NTS_DM Other Other -39 201 38 9 691 907 9 0 27 chrUextra 14017458 14017570 -14987086 - NTS_DM Other Other -107 133 25 9 691 1304 18 0 6 chrUextra 14017622 14017787 -14986869 - NTS_DM Other Other -39 201 38 9 691 490 16 0 0 chrUextra 14017787 14017848 -14986808 - NTS_DM Other Other -107 133 73 9 691 1055 0 0 0 chrUextra 14017848 14017973 -14986683 - Copia_LTR LTR Copia -3 273 149 9 691 2190 158 20 7 chrUextra 14018074 14018797 -14985859 - SAR_DM Satellite Satellite -1043 732 1 9 691 22 35 0 0 chrUextra 14018911 14018940 -14985716 + AT_rich Low_complexity Low_complexity 1 29 0 9 691 37 39 0 0 chrUextra 14019041 14019092 -14985564 + AT_rich Low_complexity Low_complexity 1 51 0 9 691 28 48 0 0 chrUextra 14019447 14019489 -14985167 + AT_rich Low_complexity Low_complexity 1 42 0 9 691 2383 4 8 0 chrUextra 14019721 14019986 -14984670 + SSU-rRNA_Dme rRNA rRNA 1729 1995 0 9 691 21 89 0 0 chrUextra 14020005 14020061 -14984595 + AT_rich Low_complexity Low_complexity 1 56 0 9 691 255 215 11 151 chrUextra 14020614 14020707 -14983949 + DM176_LTR LTR Gypsy 190 269 -238 9 691 266 176 58 14 chrUextra 14020816 14020885 -14983771 + DM176_LTR LTR Gypsy 295 366 -141 9 691 588 148 40 16 chrUextra 14020902 14021026 -14983630 + DMTOM1_LTR LTR Gypsy 284 410 0 9 691 409 100 14 28 chrUextra 14021026 14021089 -14983567 + DMTOM1_LTR LTR Gypsy 349 410 0 9 691 311 188 53 107 chrUextra 14021089 14021220 -14983436 + ROVER-I_DM LTR Gypsy 1 124 -6460 9 691 6463 6 6 0 chrUextra 14021370 14022093 -14982563 - DOC2_DM LINE Jockey -638 4155 3429 9 691 6534 4 0 0 chrUextra 14022193 14022917 -14981739 - R1_DM LINE R1 -3026 2330 1607 9 691 3087 0 0 0 chrUextra 14023017 14023356 -14981300 - FW_DM LINE Jockey -2095 2597 2259 9 691 3406 20 25 0 chrUextra 14023344 14023741 -14980915 - Gypsy4_I LTR Gypsy -2600 3688 3282 9 691 6584 3 0 1 chrUextra 14023841 14024565 -14980091 - SSU-rRNA_Dme rRNA rRNA -1128 867 145 9 692 6457 1 0 0 chrUextra 14025489 14026213 -14978443 - ROO_I LTR Pao -2176 6080 5357 9 692 3288 146 18 15 chrUextra 14026313 14026911 -14977745 + Stalker2_I LTR Gypsy 286 885 -6517 9 692 305 339 84 42 chrUextra 14027307 14027640 -14977016 + BLASTOPIA_I LTR Gypsy 4134 4480 -1 9 692 6584 4 0 0 chrUextra 14027961 14028685 -14975971 - BS LINE Jockey -204 4922 4199 9 692 2348 219 51 50 chrUextra 14028791 14029478 -14975178 - Gypsy12_LTR LTR Gypsy -1648 688 1 9 692 228 0 0 0 chrUextra 14029478 14029506 -14975150 - Gypsy12_I LTR Gypsy 0 5546 5519 9 692 3273 177 10 19 chrUextra 14029609 14030333 -14974323 - SAR_DM Satellite Satellite -366 1106 390 9 692 3192 212 57 1 chrUextra 14030434 14031157 -14973499 - ROVER-I_DM LTR Gypsy -2834 3750 2988 9 692 6198 18 7 4 chrUextra 14031257 14031981 -14972675 - CIRCE LINE Composite -2394 3962 3237 9 692 6133 22 39 0 chrUextra 14032081 14032805 -14971851 - R1_DM LINE R1 -302 5054 4303 9 692 6428 0 1 1 chrUextra 14034553 14035277 -14969379 - ROO_I LTR Pao -6566 1690 967 9 692 858 300 45 29 chrUextra 14035377 14036097 -14968559 - SAR_DM Satellite Satellite -739 731 1 9 692 377 57 19 0 chrUextra 14036202 14036255 -14968401 - NTS_DM Other Other -183 57 4 9 692 1355 6 0 18 chrUextra 14036365 14036530 -14968126 - NTS_DM Other Other -78 162 1 9 692 1926 4 17 13 chrUextra 14036530 14036769 -14967887 - NTS_DM Other Other 0 240 1 9 692 1127 0 26 19 chrUextra 14036769 14036925 -14967731 - NTS_DM Other Other 0 240 84 9 692 201 121 0 0 chrUextra 14038414 14038447 -14966209 + (TC)n Simple_repeat Simple_repeat 1 33 0 9 692 1486 5 5 0 chrUextra 14038673 14038858 -14965798 + DOC LINE Jockey 4540 4725 0 9 692 180 0 0 0 chrUextra 14038858 14038878 -14965778 + (A)n Simple_repeat Simple_repeat 1 20 0 9 692 1667 259 12 10 chrUextra 14038880 14039391 -14965265 + Copia_I LTR Copia 1527 2038 -2555 9 692 6608 0 0 0 chrUextra 14039497 14040221 -14964435 + DOC LINE Jockey 3716 4439 -286 9 692 2977 182 16 17 chrUextra 14040321 14041045 -14963611 - SAR_DM Satellite Satellite -627 723 1 9 692 2973 181 22 29 chrUextra 14041153 14041869 -14962787 - SAR_DM Satellite Satellite -300 1172 462 9 692 6501 1 3 3 chrUextra 14041969 14042693 -14961963 + SSU-rRNA_Dme rRNA rRNA 1074 1797 -198 9 692 5768 1 4 63 chrUextra 14042793 14043517 -14961139 + LSU-rRNA_Dme rRNA rRNA 1618 2298 -1602 9 692 238 111 0 0 chrUextra 14043629 14043665 -14960991 - ROVER-LTR_DM LTR Gypsy -331 36 1 9 692 5777 13 21 9 chrUextra 14043665 14044341 -14960315 - CIRCE LINE Composite -1983 4373 3690 9 692 6376 8 0 0 chrUextra 14044441 14045165 -14959491 + MDG1_I LTR Gypsy 3295 4018 -2578 9 692 3174 172 11 26 chrUextra 14045265 14045964 -14958692 + SAR_DM Satellite Satellite 430 1118 -354 9 692 403 194 0 19 chrUextra 14045878 14045983 -14958673 - XDMR_DM Unknown Unknown 0 360 258 9 692 3431 161 28 16 chrUextra 14046089 14046811 -14957845 - SAR_DM Satellite Satellite -1087 730 1 9 692 1431 35 0 0 chrUextra 14046913 14047082 -14957574 - FW_DM LINE Jockey -1996 2696 2528 9 692 4522 20 4 20 chrUextra 14047079 14047637 -14957019 - FW_DM LINE Jockey -2462 2230 1682 9 692 3506 39 44 1 chrUextra 14047737 14048461 -14956195 - R1_DM LINE R1 -2098 3258 2466 9 692 6515 3 0 0 chrUextra 14048561 14049285 -14955371 - R1_DM LINE R1 -2068 3288 2565 9 692 6509 7 3 0 chrUextra 14049385 14050109 -14954547 + LSU-rRNA_Dme rRNA rRNA 3000 3725 -175 9 692 686 0 0 0 chrUextra 14050209 14050287 -14954369 - MICROPIA_LTR LTR Gypsy -398 78 1 9 692 2592 81 279 15 chrUextra 14050287 14050349 -14954307 + ACCORD2_I LTR Gypsy 1081 1142 -6070 9 692 228 86 0 0 chrUextra 14050349 14050384 -14954272 + (TAA)n Simple_repeat Simple_repeat 2 36 0 9 692 2592 81 279 15 chrUextra 14050384 14050870 -14953786 + ACCORD2_I LTR Gypsy 1143 1773 -5439 9 692 538 57 0 0 chrUextra 14050863 14050933 -14953723 + ACCORD2_I LTR Gypsy 7122 7191 -21 9 692 899 157 6 34 chrUextra 14051035 14051213 -14953443 - Gypsy12_LTR LTR Gypsy -2163 173 1 9 692 3038 85 88 2 chrUextra 14051212 14051757 -14952899 - Gypsy12_I LTR Gypsy 0 5546 4921 9 692 6217 10 0 0 chrUextra 14051857 14052581 -14952075 + Invader2_I LTR Gypsy 1666 2389 -2203 9 692 3499 168 6 9 chrUextra 14052681 14053379 -14951277 + SAR_DM Satellite Satellite 381 1076 -396 9 692 706 53 0 11 chrUextra 14053506 14053601 -14951055 + ARS406_DM Unknown Unknown 96 189 -164 9 692 2745 187 29 7 chrUextra 14053609 14054229 -14950427 - SAR_DM Satellite Satellite -583 889 256 9 692 701 0 12 0 chrUextra 14054329 14054413 -14950243 - ALUII_DM Unknown Unknown -155 85 1 9 692 21 57 0 0 chrUextra 14054413 14054448 -14950208 + AT_rich Low_complexity Low_complexity 1 35 0 9 692 22 35 0 0 chrUextra 14054645 14054674 -14949982 + AT_rich Low_complexity Low_complexity 1 29 0 9 692 37 39 0 0 chrUextra 14054775 14054826 -14949830 + AT_rich Low_complexity Low_complexity 1 51 0 9 692 5947 33 28 0 chrUextra 14055153 14055877 -14948779 - DMCR1A LINE CR1 -592 3878 3135 9 692 28 48 0 0 chrUextra 14056000 14056042 -14948614 + AT_rich Low_complexity Low_complexity 1 42 0 9 692 6278 1 0 0 chrUextra 14056801 14057525 -14947131 + DMRT1A LINE R1 2123 2846 -2337 9 692 5849 8 3 1 chrUextra 14058453 14059173 -14945483 + QUASIMODO_I LTR Gypsy 3774 4494 -1566 9 692 635 299 25 64 chrUextra 14059304 14059950 -14944706 - GTWIN_I LTR Gypsy -2883 3538 3089 9 692 373 70 0 0 chrUextra 14059940 14059997 -14944659 - TLD2 Unknown Unknown 0 218 162 9 692 21 89 0 0 chrUextra 14060547 14060603 -14944053 + AT_rich Low_complexity Low_complexity 1 56 0 9 692 26 30 0 0 chrUextra 14060731 14060764 -14943892 + AT_rich Low_complexity Low_complexity 1 33 0 9 692 230 233 13 52 chrUextra 14060994 14061071 -14943585 + (TATATG)n Simple_repeat Simple_repeat 5 78 0 9 692 4449 25 3 3 chrUextra 14061073 14061645 -14943011 - PROTOP_A DNA P 0 1105 534 9 692 5318 37 4 9 chrUextra 14061782 14062469 -14942187 - BATUMI_I LTR Pao -5356 2607 1924 9 692 482 65 39 13 chrUextra 14062574 14062652 -14942004 + Gypsy10_LTR LTR Gypsy 285 364 0 9 692 3596 84 27 50 chrUextra 14062652 14063292 -14941364 + Gypsy10_I LTR Gypsy 1 625 -4653 9 692 6288 0 1 0 chrUextra 14063393 14064117 -14940539 - TAHRE LINE telomeric -4799 5664 4940 9 692 6318 0 0 1 chrUextra 14064217 14064940 -14939716 + LSU-rRNA_Dme rRNA rRNA 2738 3459 -441 9 692 6252 1 0 0 chrUextra 14065041 14065765 -14938891 + R2_DM LINE R2 339 1062 -2545 9 692 1542 175 35 6 chrUextra 14066689 14067226 -14937430 - SAR_DM Satellite Satellite -686 745 141 9 692 387 94 16 0 chrUextra 14067226 14067290 -14937366 + ARS406_DM Unknown Unknown 122 186 -167 9 692 1542 175 35 6 chrUextra 14067290 14067413 -14937243 - SAR_DM Satellite Satellite -686 140 1 9 692 6082 4 4 0 chrUextra 14067513 14068237 -14936419 + MAX_I LTR Pao 14 740 -7174 9 692 6131 0 1 1 chrUextra 14068337 14069061 -14935595 - LSU-rRNA_Dme rRNA rRNA -2707 1193 470 9 692 3664 9 0 2 chrUextra 14069161 14069592 -14935064 + BS2 LINE Jockey 4292 4721 0 9 692 264 30 0 0 chrUextra 14069593 14069626 -14935030 + (A)n Simple_repeat Simple_repeat 1 33 0 9 692 1023 102 170 0 chrUextra 14069626 14069885 -14934771 + DMRT1A LINE R1 4418 4720 -463 9 692 653 183 18 18 chrUextra 14069985 14070152 -14934504 + MDG1_LTR LTR Gypsy 246 412 -30 9 692 2391 153 30 5 chrUextra 14070153 14070709 -14933947 + BS3_DM LINE Jockey 1 357 -1433 9 692 40 67 0 0 chrUextra 14071251 14071326 -14933330 + AT_rich Low_complexity Low_complexity 1 75 0 9 692 660 50 59 10 chrUextra 14071399 14071500 -14933156 + DNAREP1_DM LINE Penelope 1 106 -488 9 692 2923 165 40 21 chrUextra 14071637 14072356 -14932300 + SAR_DM Satellite Satellite 191 923 -549 9 692 415 148 58 19 chrUextra 14072457 14072560 -14932096 - ARS406_DM Unknown Unknown -246 107 1 9 692 3336 230 30 23 chrUextra 14072474 14074005 -14930651 + SAR_DM Satellite Satellite 1 1542 -216 9 692 1504 27 183 0 chrUextra 14074105 14074438 -14930218 - R1_DM LINE R1 -1768 3588 3195 9 692 3185 25 0 2 chrUextra 14074436 14074829 -14929827 - R1_DM LINE R1 -2484 2872 2481 9 692 671 12 12 0 chrUextra 14074929 14075015 -14929641 + NTS_DM Other Other 47 133 -107 9 692 1252 18 0 6 chrUextra 14075015 14075180 -14929476 + NTS_DM Other Other 38 201 -39 9 692 21 57 0 0 chrUextra 14075180 14075215 -14929441 + AT_rich Low_complexity Low_complexity 1 35 0 9 692 832 9 9 27 chrUextra 14075241 14075352 -14929304 + NTS_DM Other Other 25 133 -107 9 692 817 0 0 0 chrUextra 14075352 14075448 -14929208 + NTS_DM Other Other 38 133 -107 9 692 1375 25 25 20 chrUextra 14075448 14075650 -14929006 + NTS_DM Other Other 38 240 0 9 692 2950 0 3 0 chrUextra 14075753 14076093 -14928563 + LSU-rRNA_Dme rRNA rRNA 3560 3900 0 9 692 22 56 0 0 chrUextra 14076165 14076201 -14928455 + AT_rich Low_complexity Low_complexity 1 36 0 9 692 246 150 0 0 chrUextra 14076206 14076246 -14928410 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 692 246 150 0 0 chrUextra 14076298 14076338 -14928318 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 692 246 150 0 0 chrUextra 14076390 14076430 -14928226 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 692 3703 0 0 0 chrUextra 14076578 14076999 -14927657 - LSU-rRNA_Dme rRNA rRNA -1692 2208 1788 9 692 2087 4 8 4 chrUextra 14077043 14077301 -14927355 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1530 9 692 6306 4 0 0 chrUextra 14079049 14079773 -14924883 - BS2 LINE Jockey -449 4272 3549 9 692 6337 1 1 0 chrUextra 14079873 14080597 -14924059 - LSU-rRNA_Dme rRNA rRNA -293 3607 2883 9 692 2704 74 14 41 chrUextra 14080697 14081135 -14923521 - Gypsy12_I LTR Gypsy -5120 426 1 9 692 1492 137 11 21 chrUextra 14081135 14081419 -14923237 - Gypsy12A_LTR LTR Gypsy 0 2280 2000 9 692 5853 21 8 0 chrUextra 14081520 14082243 -14922413 + ROO_I LTR Pao 2394 3122 -5134 9 692 6105 12 1 0 chrUextra 14082343 14083066 -14921590 - DM1731_I LTR Copia -2776 1200 477 9 692 6066 1 0 0 chrUextra 14083166 14083889 -14920767 - Invader2_I LTR Gypsy -1467 3125 2403 9 692 2123 97 117 132 chrUextra 14083989 14084699 -14919957 - BATUMI_I LTR Pao -7138 825 127 9 692 4768 60 111 0 chrUextra 14084812 14085535 -14919121 + TRANSIB2 DNA Transib 681 1483 -1361 9 692 4206 31 2 2 chrUextra 14085635 14086157 -14918499 + R1_DM LINE R1 4835 5356 0 9 692 1114 78 6 6 chrUextra 14086190 14086358 -14918298 + R1_DM LINE R1 1 168 -5188 9 692 2912 43 3 8 chrUextra 14086807 14087181 -14917475 - DIVER2_LTR LTR Pao 0 385 14 9 692 6208 0 0 0 chrUextra 14087281 14088004 -14916652 + ROO_I LTR Pao 5898 6620 -1636 9 692 3014 173 13 21 chrUextra 14088104 14088801 -14915855 + SAR_DM Satellite Satellite 421 1111 -361 9 692 325 190 10 29 chrUextra 14088724 14088827 -14915829 - XDMR_DM Unknown Unknown 0 360 260 9 692 5867 11 58 0 chrUextra 14088927 14089650 -14915006 + STALKER4_I LTR Gypsy 3872 4636 -1894 9 692 3189 164 29 13 chrUextra 14089763 14090465 -14914191 - SAR_DM Satellite Satellite -396 1076 364 9 692 6077 3 0 1 chrUextra 14090573 14091296 -14913360 + DM412 LTR Gypsy 5643 6364 -533 9 692 2280 4 0 0 chrUextra 14091396 14091657 -14912999 + R1_DM LINE R1 5096 5356 0 9 692 4003 4 0 0 chrUextra 14091655 14092119 -14912537 + LSU-rRNA_Dme rRNA rRNA 2640 3103 -797 9 692 2957 57 66 0 chrUextra 14092219 14092626 -14912030 + Baggins1 LINE LOA 5004 5437 -16 9 692 6219 1 1 3 chrUextra 14093042 14093765 -14910891 + SSU-rRNA_Dme rRNA rRNA 869 1590 -405 9 692 5321 32 47 0 chrUextra 14093865 14094588 -14910068 - NINJA_I LTR Pao -3754 2257 1501 9 692 6295 0 0 0 chrUextra 14094688 14095411 -14909245 + FW_DM LINE Jockey 670 1392 -3300 9 692 2419 11 0 3 chrUextra 14095511 14095797 -14908859 + CIRCE LINE Composite 4088 4372 -1984 9 692 3590 12 2 0 chrUextra 14095797 14096219 -14908437 + Invader1_LTR LTR Gypsy 1 423 0 9 692 3348 166 8 11 chrUextra 14097159 14097876 -14906780 + SAR_DM Satellite Satellite 332 1046 -426 9 692 6180 1 0 0 chrUextra 14097980 14098703 -14905953 - QUASIMODO_I LTR Gypsy -4912 1148 426 9 692 6138 11 0 0 chrUextra 14098803 14099526 -14905130 + Gypsy4_I LTR Gypsy 1008 1730 -4558 9 692 3013 3 3 0 chrUextra 14100449 14100796 -14903860 + SSU-rRNA_Dme rRNA rRNA 1648 1995 0 9 692 6225 8 0 0 chrUextra 14101272 14101995 -14902661 + Invader3_I LTR Gypsy 512 1234 -3654 9 692 6231 1 0 0 chrUextra 14102095 14102818 -14901838 + ROO_I LTR Pao 4890 5612 -2644 9 692 1566 0 0 0 chrUextra 14102918 14103092 -14901564 + (GAGAA)n Simple_repeat Simple_repeat 2 175 0 9 692 1444 17 0 0 chrUextra 14103092 14103265 -14901391 - DIVER2_LTR LTR Pao -91 294 122 9 692 429 103 0 0 chrUextra 14103272 14103340 -14901316 + (CGAGA)n Simple_repeat Simple_repeat 3 70 0 9 692 2873 188 10 9 chrUextra 14103741 14104434 -14900222 - SAR_DM Satellite Satellite -584 888 195 9 692 715 122 0 0 chrUextra 14104341 14104464 -14900192 + ARS406_DM Unknown Unknown 1 123 -230 9 692 4324 0 0 0 chrUextra 14104564 14105066 -14899590 - ROO_I LTR Pao -300 7956 7455 9 692 1853 0 0 0 chrUextra 14105065 14105287 -14899369 - ROO_I LTR Pao -2160 6096 5875 9 692 6144 1 1 0 chrUextra 14106210 14106933 -14897723 + LSU-rRNA_Dme rRNA rRNA 476 1199 -2701 9 692 2851 191 21 19 chrUextra 14107034 14107755 -14896901 + SAR_DM Satellite Satellite 1 722 -203 9 692 198 0 0 0 chrUextra 14108072 14108094 -14896562 + (A)n Simple_repeat Simple_repeat 1 22 0 9 692 317 281 104 86 chrUextra 14109702 14109982 -14894674 - Invader1_LTR LTR Gypsy -55 368 84 9 692 2850 168 15 10 chrUextra 14110325 14111044 -14893612 + SAR_DM Satellite Satellite 1 722 -1037 9 692 6067 22 47 1 chrUextra 14111148 14111871 -14892785 + DMCR1A LINE CR1 2477 3232 -1238 9 692 3070 179 22 25 chrUextra 14111973 14112689 -14891967 + SAR_DM Satellite Satellite 405 1118 -354 9 692 3840 52 43 0 chrUextra 14112794 14113356 -14891300 + PROTOP_A DNA P 573 1105 0 9 692 3418 176 8 8 chrUextra 14113617 14114337 -14890319 - SAR_DM Satellite Satellite -471 1001 282 9 692 6462 1 3 3 chrUextra 14114441 14115163 -14889493 + SSU-rRNA_Dme rRNA rRNA 708 1429 -566 9 692 2885 45 3 0 chrUextra 14115263 14115615 -14889041 + TART_B1 LINE telomeric 3300 3652 -7002 9 692 2579 78 8 37 chrUextra 14115612 14115986 -14888670 + TART_B1 LINE telomeric 4297 4659 -5995 9 692 1194 110 0 0 chrUextra 14116909 14117082 -14887574 - DMRT1B LINE R1 -1877 3306 3134 9 692 532 268 73 6 chrUextra 14117113 14117278 -14887378 + Gypsy12_I LTR Gypsy 3154 3329 -2217 9 692 6482 0 3 3 chrUextra 14117732 14118455 -14886201 - SSU-rRNA_Dme rRNA rRNA -433 1562 840 9 692 3056 188 32 22 chrUextra 14118558 14119278 -14885378 + SAR_DM Satellite Satellite 1 727 -216 9 692 1291 53 75 0 chrUextra 14119397 14119754 -14884902 - PROTOP_A DNA P -339 766 520 9 692 1810 58 0 0 chrUextra 14119741 14119967 -14884689 - PROTOP_A DNA P -806 299 74 9 692 5807 40 14 3 chrUextra 14120201 14120924 -14883732 + R1_DM LINE R1 638 1368 -3988 9 692 6074 12 0 0 chrUextra 14121024 14121747 -14882909 - IDEFIX_I LTR Gypsy -1429 4199 3477 9 692 1857 0 0 0 chrUextra 14121847 14122048 -14882608 + LSU-rRNA_Dme rRNA rRNA 2455 2655 -1245 9 692 4676 2 0 0 chrUextra 14122053 14122570 -14882086 + R1_DM LINE R1 1447 1963 -3393 9 692 5937 29 8 4 chrUextra 14123493 14124216 -14880440 + MDG1_I LTR Gypsy 1424 2149 -4447 9 692 6513 1 0 0 chrUextra 14124316 14125039 -14879617 - R1_DM LINE R1 -1937 3419 2697 9 692 6441 6 0 3 chrUextra 14125139 14125862 -14878794 + R1_DM LINE R1 4185 4905 -451 9 692 3617 60 28 0 chrUextra 14126785 14127508 -14877148 - DM297_I LTR Gypsy -2385 3782 3007 9 692 3149 185 14 12 chrUextra 14127608 14128331 -14876325 + SAR_DM Satellite Satellite 260 983 -489 9 692 4070 51 98 33 chrUextra 14128431 14129064 -14875592 - ROO_I LTR Pao -7469 787 114 9 692 410 88 0 0 chrUextra 14129097 14129154 -14875502 - ROO_LTR LTR Pao 0 428 372 9 692 6448 7 0 0 chrUextra 14129254 14129977 -14874679 - Invader2_I LTR Gypsy -3237 1355 633 9 692 974 107 0 7 chrUextra 14130079 14130230 -14874426 + (GAGAA)n Simple_repeat Simple_repeat 5 154 0 9 692 4087 13 4 0 chrUextra 14131742 14132227 -14872429 + DOC LINE Jockey 3861 4725 0 9 692 6601 0 1 1 chrUextra 14132546 14133269 -14871387 + LSU-rRNA_Dme rRNA rRNA 2911 3633 -267 9 692 488 153 24 0 chrUextra 14134371 14134456 -14870200 - NTS_DM Other Other -150 90 4 9 692 1355 6 0 18 chrUextra 14134566 14134731 -14869925 - NTS_DM Other Other -78 162 1 9 692 1377 6 22 16 chrUextra 14134731 14134915 -14869741 - NTS_DM Other Other 0 240 56 9 692 514 119 36 0 chrUextra 14135025 14135109 -14869547 - NTS_DM Other Other -150 90 4 9 692 1355 6 0 18 chrUextra 14135220 14135385 -14869271 - NTS_DM Other Other -78 162 1 9 692 1926 4 17 13 chrUextra 14135385 14135624 -14869032 - NTS_DM Other Other 0 240 1 9 692 794 0 35 26 chrUextra 14135624 14135738 -14868918 - NTS_DM Other Other 0 240 126 9 692 3106 196 14 20 chrUextra 14135847 14136557 -14868099 + SAR_DM Satellite Satellite 1 705 -203 9 692 564 200 133 15 chrUextra 14136670 14136873 -14867783 - Gypsy12_LTR LTR Gypsy -654 1682 1456 9 692 1545 187 159 31 chrUextra 14136876 14137384 -14867272 - Gypsy12_LTR LTR Gypsy -661 1675 1103 9 692 2192 12 4 0 chrUextra 14137484 14137734 -14866922 - DM176_I LTR Gypsy -6169 251 1 9 692 2989 48 61 48 chrUextra 14137734 14138207 -14866449 - DM176_LTR LTR Gypsy -27 480 16 9 692 870 9 9 27 chrUextra 14138322 14138433 -14866223 + NTS_DM Other Other 25 133 -107 9 692 1304 18 0 6 chrUextra 14138433 14138598 -14866058 + NTS_DM Other Other 38 201 -39 9 692 21 57 0 0 chrUextra 14138598 14138633 -14866023 + AT_rich Low_complexity Low_complexity 1 35 0 9 692 870 9 9 27 chrUextra 14138659 14138770 -14865886 + NTS_DM Other Other 25 133 -107 9 692 851 0 0 0 chrUextra 14138770 14138866 -14865790 + NTS_DM Other Other 38 133 -107 9 692 1272 25 0 6 chrUextra 14138866 14139030 -14865626 + NTS_DM Other Other 38 200 -40 9 692 579 298 28 28 chrUextra 14139497 14139818 -14864838 + DM176_I LTR Gypsy 1839 2159 -4261 9 692 713 21 21 11 chrUextra 14139759 14139853 -14864803 - TLD3 Unknown Unknown -3 169 75 9 692 907 9 0 27 chrUextra 14139972 14140084 -14864572 - NTS_DM Other Other -107 133 25 9 692 1304 18 0 6 chrUextra 14140136 14140301 -14864355 - NTS_DM Other Other -39 201 38 9 692 907 9 0 27 chrUextra 14140301 14140413 -14864243 - NTS_DM Other Other -107 133 25 9 692 22 56 0 0 chrUextra 14140439 14140475 -14864181 + AT_rich Low_complexity Low_complexity 1 36 0 9 692 244 150 0 0 chrUextra 14140488 14140528 -14864128 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 692 262 150 0 0 chrUextra 14140571 14140611 -14864045 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 692 6153 22 31 0 chrUextra 14140779 14141499 -14863157 + DMCR1A LINE CR1 1095 1836 -2634 9 692 414 204 0 10 chrUextra 14141599 14141703 -14862953 + XDMR_DM Unknown Unknown 258 360 0 9 692 3220 178 6 17 chrUextra 14141618 14142320 -14862336 - SAR_DM Satellite Satellite -354 1118 425 9 692 5802 0 2 0 chrUextra 14142422 14143056 -14861600 + SSU-rRNA_Dme rRNA rRNA 1361 1995 0 9 692 21 89 0 0 chrUextra 14143075 14143131 -14861525 + AT_rich Low_complexity Low_complexity 1 56 0 9 692 997 20 26 26 chrUextra 14143245 14143397 -14861259 + NTS_DM Other Other 89 240 0 9 692 1811 21 17 17 chrUextra 14143397 14143637 -14861019 + NTS_DM Other Other 1 240 0 9 692 1805 17 17 21 chrUextra 14143637 14143878 -14860778 + NTS_DM Other Other 1 240 0 9 692 784 22 0 0 chrUextra 14143878 14143968 -14860688 + NTS_DM Other Other 1 90 -150 9 692 6071 26 8 1 chrUextra 14144068 14144788 -14859868 + DOC3_DM LINE Jockey 3008 3732 -1008 9 692 514 119 36 0 chrUextra 14145142 14145226 -14859430 - NTS_DM Other Other -150 90 4 9 692 1355 6 0 18 chrUextra 14145336 14145501 -14859155 - NTS_DM Other Other -78 162 1 9 692 774 9 35 26 chrUextra 14145501 14145614 -14859042 - NTS_DM Other Other 0 240 127 9 692 484 119 35 12 chrUextra 14145830 14145915 -14858741 + NTS_DM Other Other 4 90 -150 9 692 21 71 0 0 chrUextra 14146188 14146230 -14858426 + AT_rich Low_complexity Low_complexity 1 42 0 9 692 3709 142 78 37 chrUextra 14146537 14147260 -14857396 - STALKER4_I LTR Gypsy -4345 2185 1434 9 692 6128 8 4 4 chrUextra 14147360 14148083 -14856573 + STALKER4_I LTR Gypsy 1330 2052 -4478 9 692 6510 1 0 0 chrUextra 14148183 14148906 -14855750 + R1_DM LINE R1 2606 3328 -2028 9 692 6380 1 1 0 chrUextra 14149006 14149729 -14854927 + MDG3_I LTR Gypsy 3155 3878 -1108 9 692 3164 173 78 8 chrUextra 14149829 14150547 -14854109 + SAR_DM Satellite Satellite 273 1040 -432 9 692 300 132 12 24 chrUextra 14150794 14150879 -14853777 + A-rich Low_complexity Low_complexity 1 84 0 9 692 1544 47 5 0 chrUextra 14151182 14151375 -14853281 - DMRT1A LINE R1 -11 5172 4979 9 692 6505 7 0 0 chrUextra 14151475 14152198 -14852458 - R1_DM LINE R1 -181 5175 4453 9 692 3875 15 23 4 chrUextra 14152298 14152771 -14851885 - BATUMI_I LTR Pao -7481 482 1 9 692 2035 8 0 28 chrUextra 14152771 14153021 -14851635 - BATUMI_LTR LTR Pao 0 272 30 9 692 374 178 56 0 chrUextra 14153126 14153216 -14851440 - PROTOP_B DNA P -190 963 869 9 692 2328 35 10 0 chrUextra 14153344 14153634 -14851022 - Gypsy7_I LTR Gypsy -1077 3907 3615 9 692 876 91 67 1 chrUextra 14153635 14153784 -14850872 - Gypsy7_I LTR Gypsy -1650 3334 3199 9 692 6376 4 4 3 chrUextra 14153944 14154667 -14849989 + LSU-rRNA_Dme rRNA rRNA 985 1708 -2192 9 692 1304 24 0 6 chrUextra 14154767 14154935 -14849721 - NTS_DM Other Other -36 204 38 9 692 851 0 0 0 chrUextra 14154935 14155031 -14849625 - NTS_DM Other Other -107 133 38 9 692 870 9 9 27 chrUextra 14155031 14155142 -14849514 - NTS_DM Other Other -107 133 25 9 692 21 57 0 0 chrUextra 14155168 14155203 -14849453 + AT_rich Low_complexity Low_complexity 1 35 0 9 692 1304 18 0 6 chrUextra 14155203 14155368 -14849288 - NTS_DM Other Other -39 201 38 9 692 889 18 0 27 chrUextra 14155368 14155480 -14849176 - NTS_DM Other Other -107 133 25 9 86 3693 61 10 0 chrUextra 14155642 14156133 -14848523 - PROTOP_B DNA P 0 1153 658 9 693 28 0 0 0 chrUextra 14156133 14156161 -14848495 + AT_rich Low_complexity Low_complexity 1 28 0 9 693 1136 29 0 0 chrUextra 14156175 14156313 -14848343 - PROTOP_B DNA P -841 312 175 9 693 4801 9 37 0 chrUextra 14156414 14156987 -14847669 + IDEFIX_LTR LTR Gypsy 1 594 0 9 693 36 0 0 0 chrUextra 14156987 14157023 -14847633 + AT_rich Low_complexity Low_complexity 1 36 0 9 693 3811 2 0 0 chrUextra 14157236 14157652 -14847004 - DMRT1B LINE R1 -4767 416 1 9 693 772 43 0 0 chrUextra 14157865 14157959 -14846697 + R1_DM LINE R1 2555 2648 -2708 9 693 6355 8 3 1 chrUextra 14158062 14158782 -14845874 - G_DM LINE Jockey -2199 2147 1427 9 693 26 30 0 0 chrUextra 14159240 14159273 -14845383 + AT_rich Low_complexity Low_complexity 1 33 0 9 693 23 68 0 0 chrUextra 14159319 14159363 -14845293 + AT_rich Low_complexity Low_complexity 1 44 0 9 693 21 89 0 0 chrUextra 14159401 14159457 -14845199 + AT_rich Low_complexity Low_complexity 1 56 0 9 693 2124 206 24 7 chrUextra 14159709 14160421 -14844235 + SAR_DM Satellite Satellite 1 724 -668 9 693 6167 26 1 1 chrUextra 14160528 14161251 -14843405 - R1_DM LINE R1 -10 5346 4624 9 693 6104 10 0 0 chrUextra 14161351 14162074 -14842582 + QUASIMODO_I LTR Gypsy 764 1486 -4574 9 693 2671 182 51 31 chrUextra 14162175 14162882 -14841774 + SAR_DM Satellite Satellite 399 1119 -353 9 693 366 184 10 30 chrUextra 14162796 14162897 -14841759 - XDMR_DM Unknown Unknown 0 360 262 9 693 497 198 115 88 chrUextra 14163011 14163296 -14841360 + GTWIN_I LTR Gypsy 54 410 -6011 9 693 2489 127 12 20 chrUextra 14163318 14163720 -14840936 + GTWIN_I LTR Gypsy 466 864 -5557 9 693 27 0 0 0 chrUextra 14164020 14164047 -14840609 + AT_rich Low_complexity Low_complexity 1 27 0 9 693 23 86 0 0 chrUextra 14164093 14164151 -14840505 + AT_rich Low_complexity Low_complexity 1 58 0 9 693 22 35 0 0 chrUextra 14164185 14164214 -14840442 + AT_rich Low_complexity Low_complexity 1 29 0 9 693 21 0 0 0 chrUextra 14164290 14164311 -14840345 + AT_rich Low_complexity Low_complexity 1 21 0 9 693 6078 15 1 3 chrUextra 14164643 14165366 -14839290 + DMRT1B LINE R1 415 1136 -4047 9 693 21 95 0 0 chrUextra 14165594 14165657 -14838999 + AT_rich Low_complexity Low_complexity 1 63 0 9 693 4233 0 0 50 chrUextra 14165669 14166189 -14838467 + LSU-rRNA_Dme rRNA rRNA 1 494 -3406 9 693 348 121 17 0 chrUextra 14166290 14166348 -14838308 + ARS406_DM Unknown Unknown 107 165 -188 9 693 467 16 0 0 chrUextra 14167112 14167173 -14837483 + NTS_DM Other Other 73 133 -107 9 693 1252 18 0 6 chrUextra 14167173 14167338 -14837318 + NTS_DM Other Other 38 201 -39 9 693 852 18 0 27 chrUextra 14167390 14167502 -14837154 + NTS_DM Other Other 25 133 -107 9 693 1252 18 0 6 chrUextra 14167502 14167667 -14836989 + NTS_DM Other Other 38 201 -39 9 693 21 57 0 0 chrUextra 14167667 14167702 -14836954 + AT_rich Low_complexity Low_complexity 1 35 0 9 693 804 10 9 28 chrUextra 14167728 14167835 -14836821 + NTS_DM Other Other 25 129 -111 9 693 6101 1 0 0 chrUextra 14167935 14168658 -14835998 + TABOR_I LTR Gypsy 1497 2219 -4117 9 693 5934 0 0 0 chrUextra 14168758 14169481 -14835175 + QUASIMODO_I LTR Gypsy 3293 4015 -2045 9 693 6012 18 1 1 chrUextra 14169581 14170304 -14834352 + DOC2_DM LINE Jockey 2164 2886 -1907 9 693 2760 47 6 0 chrUextra 14170404 14170766 -14833890 - Baggins1 LINE LOA -299 5154 4791 9 693 6133 3 1 1 chrUextra 14171227 14171950 -14832706 + LSU-rRNA_Dme rRNA rRNA 581 1303 -2597 9 693 3004 181 6 9 chrUextra 14172053 14172740 -14831916 - SAR_DM Satellite Satellite -593 879 195 9 693 696 127 0 0 chrUextra 14172647 14172773 -14831883 + ARS406_DM Unknown Unknown 1 126 -227 9 693 6166 1 0 0 chrUextra 14172873 14173595 -14831061 - DM176_I LTR Gypsy -1928 4492 3771 9 693 6253 7 0 0 chrUextra 14173696 14174419 -14830237 + DM1731_I LTR Copia 938 1660 -2316 9 693 5813 29 0 3 chrUextra 14175342 14176065 -14828591 - R1_DM LINE R1 -1716 3640 2920 9 693 5917 8 4 0 chrUextra 14176165 14176888 -14827768 + STALKER4_I LTR Gypsy 4699 5424 -1106 9 693 6141 3 0 0 chrUextra 14176988 14177711 -14826945 + STALKER4_I LTR Gypsy 1400 2122 -4408 9 693 3121 18 91 6 chrUextra 14177811 14178534 -14826122 + R1_DM LINE R1 3403 4187 -1169 9 693 1719 171 8 7 chrUextra 14178636 14179357 -14825299 - SAR_DM Satellite Satellite -514 722 1 9 693 2972 173 18 22 chrUextra 14179458 14180174 -14824482 + SAR_DM Satellite Satellite 237 949 -523 9 693 3054 58 7 5 chrUextra 14180280 14180697 -14823959 - R1_DM LINE R1 -4938 418 1 9 693 2296 15 0 0 chrUextra 14180732 14181003 -14823653 - R1_DM LINE R1 -2 5354 5084 9 693 2982 198 13 19 chrUextra 14181103 14181826 -14822830 + SAR_DM Satellite Satellite 1 718 -208 9 693 6325 1 1 0 chrUextra 14181926 14182649 -14822007 - LSU-rRNA_Dme rRNA rRNA -168 3732 3009 9 693 401 167 9 29 chrUextra 14182749 14182854 -14821802 + XDMR_DM Unknown Unknown 258 360 0 9 693 2886 172 16 26 chrUextra 14182768 14183470 -14821186 - SAR_DM Satellite Satellite -353 1119 425 9 693 266 282 107 89 chrUextra 14183880 14184160 -14820496 - Invader1_LTR LTR Gypsy -55 368 84 9 693 2997 173 48 10 chrUextra 14184395 14185118 -14819538 - SAR_DM Satellite Satellite -466 1006 256 9 693 2935 34 50 3 chrUextra 14185218 14185941 -14818715 + PROTOP_A DNA P 317 1073 -32 9 693 335 296 19 19 chrUextra 14186306 14186468 -14818188 - MDG3_I LTR Gypsy -1562 3424 3263 9 693 879 178 102 15 chrUextra 14186897 14187102 -14817554 + DMLTR5 LTR Gypsy 44 266 0 9 693 351 49 65 16 chrUextra 14187101 14187163 -14817493 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 9 693 249 128 0 21 chrUextra 14187185 14187233 -14817423 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 9 693 2337 108 21 27 chrUextra 14187687 14188388 -14816268 + DMSAT6 Satellite Satellite 1 697 -152 9 693 3236 162 11 10 chrUextra 14189352 14190056 -14814600 - SAR_DM Satellite Satellite -396 1076 372 9 693 6295 6 0 0 chrUextra 14190156 14190879 -14813777 - LINEJ1_DM LINE Jockey -1525 3495 2773 9 693 842 67 14 36 chrUextra 14190980 14191120 -14813536 - ROO_I LTR Pao -8006 250 114 9 693 2174 32 153 3 chrUextra 14191153 14191525 -14813131 - ROO_LTR LTR Pao 0 428 1 9 693 26 50 0 0 chrUextra 14191560 14191600 -14813056 + AT_rich Low_complexity Low_complexity 1 40 0 9 693 1999 20 0 4 chrUextra 14191802 14192048 -14812608 + DM1731_I LTR Copia 1971 2215 -1761 9 693 4069 8 2 0 chrUextra 14192046 14192525 -14812131 + DM1731_I LTR Copia 2357 2836 -1140 9 693 1333 12 6 12 chrUextra 14192787 14192956 -14811700 - TLD3 Unknown Unknown -3 169 2 9 693 898 288 19 19 chrUextra 14192934 14193348 -14811308 + ROVER-I_DM LTR Gypsy 2576 2989 -3595 9 693 1856 69 4 26 chrUextra 14193448 14193715 -14810941 + Baggins1 LINE LOA 4931 5191 -262 9 693 3315 174 7 6 chrUextra 14194272 14194994 -14809662 - SAR_DM Satellite Satellite -396 1076 354 9 693 6266 0 0 0 chrUextra 14195095 14195817 -14808839 + R1_DM LINE R1 2267 2988 -2368 9 693 5640 37 15 0 chrUextra 14195917 14196640 -14808016 - R1_DM LINE R1 -2129 3227 2494 9 693 4237 43 2 0 chrUextra 14196932 14197463 -14807193 + Baggins1 LINE LOA 4791 5322 -131 9 693 2856 177 17 39 chrUextra 14197563 14198286 -14806370 - SAR_DM Satellite Satellite -470 1002 296 9 693 6220 1 1 3 chrUextra 14198386 14199109 -14805547 + SSU-rRNA_Dme rRNA rRNA 631 1352 -643 9 693 343 264 0 0 chrUextra 14199212 14199303 -14805353 - Copia2_I LTR Copia -3505 657 567 9 693 637 192 6 50 chrUextra 14200058 14200217 -14804439 - HETRP_DM Satellite Satellite -203 1669 1518 9 693 649 217 0 32 chrUextra 14200334 14200491 -14804165 - HETRP_DM Satellite Satellite -203 1669 1518 9 693 477 217 8 16 chrUextra 14200608 14200730 -14803926 - HETRP_DM Satellite Satellite -203 1669 1549 9 693 192 40 0 0 chrUextra 14200730 14200755 -14803901 + (TC)n Simple_repeat Simple_repeat 2 26 0 9 693 415 165 35 52 chrUextra 14200855 14200970 -14803686 + XDMR_DM Unknown Unknown 248 360 0 9 693 2851 180 9 22 chrUextra 14200884 14201578 -14803078 - SAR_DM Satellite Satellite -354 1118 434 9 693 3102 164 8 28 chrUextra 14201678 14202399 -14802257 + SAR_DM Satellite Satellite 407 1113 -359 9 693 683 103 111 0 chrUextra 14202501 14202618 -14802038 - Invader1_I LTR Gypsy -1159 2027 1898 9 693 4257 50 64 0 chrUextra 14202618 14203224 -14801432 + PROTOP DNA P 1 645 -3835 9 693 2119 160 13 9 chrUextra 14203324 14203778 -14800878 + SAR_DM Satellite Satellite 448 903 -569 9 693 1053 198 4 4 chrUextra 14203793 14204047 -14800609 + SAR_DM Satellite Satellite 496 749 -723 9 693 5797 17 26 7 chrUextra 14204149 14204870 -14799786 - ACCORD2_I LTR Gypsy -6258 954 220 9 693 28 48 0 0 chrUextra 14205208 14205250 -14799406 + AT_rich Low_complexity Low_complexity 1 42 0 9 693 6158 3 3 3 chrUextra 14207439 14208162 -14796494 + SSU-rRNA_Dme rRNA rRNA 873 1595 -400 9 693 6033 0 1 0 chrUextra 14208262 14208985 -14795671 - STALKER4_I LTR Gypsy -2922 3608 2885 9 693 3616 12 0 0 chrUextra 14209205 14209635 -14795021 + Gypsy5_LTR LTR Gypsy 1 430 0 9 693 413 0 0 0 chrUextra 14209635 14209682 -14794974 + Gypsy5_I LTR Gypsy 1 47 -6462 9 693 5975 3 0 3 chrUextra 14209908 14210596 -14794060 - SSU-rRNA_Dme rRNA rRNA -1309 686 1 9 693 5947 9 10 0 chrUextra 14210730 14210784 -14793872 + SSU-rRNA_Dme rRNA rRNA 151 204 -1791 9 693 243 0 0 0 chrUextra 14210784 14210811 -14793845 + (TTA)n Simple_repeat Simple_repeat 1 27 0 9 693 5947 9 10 0 chrUextra 14210811 14211452 -14793204 + SSU-rRNA_Dme rRNA rRNA 205 851 -1144 9 693 6142 4 3 0 chrUextra 14211552 14212274 -14792382 + R1_DM LINE R1 1584 2307 -3049 9 693 6285 1 0 0 chrUextra 14212374 14213096 -14791560 - R1_DM LINE R1 -2713 2643 1922 9 693 6161 1 1 4 chrUextra 14214018 14214740 -14789916 - LSU-rRNA_Dme rRNA rRNA -2407 1493 774 9 693 476 131 36 0 chrUextra 14215022 14215106 -14789550 - NTS_DM Other Other -150 90 4 9 693 1301 6 0 18 chrUextra 14215216 14215381 -14789275 - NTS_DM Other Other -78 162 1 9 693 1293 6 22 17 chrUextra 14215381 14215562 -14789094 - NTS_DM Other Other 0 240 59 9 693 3011 184 10 7 chrUextra 14215662 14216362 -14788294 + SAR_DM Satellite Satellite 375 1076 -396 9 693 4069 60 17 107 chrUextra 14216484 14217206 -14787450 - CIRCE LINE Composite -621 5735 5079 9 693 22 35 0 0 chrUextra 14218821 14218850 -14785806 + AT_rich Low_complexity Low_complexity 1 29 0 9 693 904 306 37 37 chrUextra 14218961 14219671 -14784985 + HMSBEAGLE_I LTR Gypsy 4541 5250 -1279 9 693 6295 0 0 0 chrUextra 14219772 14220494 -14784162 - DOC LINE Jockey -1955 2770 2049 9 693 6256 3 0 0 chrUextra 14220594 14221316 -14783340 - DOC LINE Jockey -1945 2780 2059 9 693 1756 63 0 4 chrUextra 14221416 14221655 -14783001 - PROTOP DNA P -4169 311 74 9 693 6578 4 0 1 chrUextra 14222238 14222960 -14781696 + DOC LINE Jockey 1891 2611 -2114 9 693 2190 4 8 4 chrUextra 14223060 14223314 -14781342 + LSU-rRNA_Dme rRNA rRNA 1537 1791 -2109 9 693 3965 5 0 0 chrUextra 14223355 14223782 -14780874 + LSU-rRNA_Dme rRNA rRNA 1788 2214 -1686 9 693 3323 201 12 20 chrUextra 14223883 14224604 -14780052 - SAR_DM Satellite Satellite -610 715 1 9 693 3340 176 8 13 chrUextra 14224707 14225422 -14779234 + SAR_DM Satellite Satellite 192 903 -569 9 693 258 130 0 0 chrUextra 14225526 14225572 -14779084 + HOBO DNA hAT 2971 3016 0 9 693 820 170 32 19 chrUextra 14225579 14225735 -14778921 - HETRP_DM Satellite Satellite -197 1675 1518 9 693 620 208 70 13 chrUextra 14225866 14226022 -14778634 - HETRP_DM Satellite Satellite -190 1682 1518 9 693 384 150 112 0 chrUextra 14226156 14226236 -14778420 + DNAREP1_DM LINE Penelope 67 155 -439 9 693 1316 0 0 0 chrUextra 14226351 14226494 -14778162 - ROO_LTR LTR Pao -285 143 1 9 693 4942 9 21 0 chrUextra 14226494 14227070 -14777586 - ROO_I LTR Pao 0 8256 7669 9 693 6629 1 0 0 chrUextra 14227170 14227891 -14776765 + DM176_I LTR Gypsy 3863 4583 -1837 9 693 6588 6 0 4 chrUextra 14227992 14228714 -14775942 - CIRCE LINE Composite -2262 4094 3376 9 693 5598 47 61 1 chrUextra 14228814 14229536 -14775120 - Baggins1 LINE LOA -4368 1085 321 9 693 6761 1 0 0 chrUextra 14229636 14230358 -14774298 - SSU-rRNA_Dme rRNA rRNA -978 1017 296 9 693 6425 4 0 12 chrUextra 14231280 14232002 -14772654 + DOC LINE Jockey 267 979 -3746 9 693 5477 58 44 0 chrUextra 14232116 14232824 -14771832 + ROOA_I LTR Pao 5438 6176 -673 9 693 821 26 0 9 chrUextra 14232924 14233038 -14771618 + NTS_DM Other Other 89 201 -39 9 693 936 9 0 27 chrUextra 14233090 14233202 -14771454 + NTS_DM Other Other 25 133 -107 9 693 1350 18 0 6 chrUextra 14233202 14233367 -14771289 + NTS_DM Other Other 38 201 -39 9 693 906 9 0 35 chrUextra 14233419 14233532 -14771124 + NTS_DM Other Other 25 133 -107 9 693 951 9 0 9 chrUextra 14233532 14233646 -14771010 + NTS_DM Other Other 38 150 -90 9 693 5364 10 0 0 chrUextra 14233746 14234345 -14770311 + G_DM LINE Jockey 3036 3634 -712 9 693 1070 32 0 0 chrUextra 14234343 14234468 -14770188 + G_DM LINE Jockey 3883 4007 -339 9 693 6609 10 0 0 chrUextra 14234568 14235290 -14769366 + STALKER4_I LTR Gypsy 3881 4602 -1928 9 693 1357 0 0 7 chrUextra 14235962 14236112 -14768544 - SSU-rRNA_Dme rRNA rRNA 0 1995 1847 9 693 6280 25 0 0 chrUextra 14236212 14236934 -14767722 - R1_DM LINE R1 -2355 3001 2280 9 693 5939 25 0 18 chrUextra 14237034 14237754 -14766902 + MDG1_I LTR Gypsy 5451 6157 -439 9 693 1608 11 0 0 chrUextra 14237857 14238040 -14766616 + R1_DM LINE R1 4884 5066 -290 9 693 1004 35 0 0 chrUextra 14238037 14238151 -14766505 + R1_DM LINE R1 5243 5356 0 9 693 3029 66 5 5 chrUextra 14238184 14238578 -14766078 + R1_DM LINE R1 1 394 -4962 9 693 1064 298 20 27 chrUextra 14238680 14239131 -14765525 + Invader1_I LTR Gypsy 2122 2569 -617 9 693 6611 3 0 0 chrUextra 14239500 14240222 -14764434 + G2_DM LINE Jockey 628 1349 -1753 9 693 229 330 35 9 chrUextra 14240565 14240678 -14763978 - Copia2_I LTR Copia -3931 231 116 9 693 1061 8 0 0 chrUextra 14240926 14241044 -14763612 - Copia2_I LTR Copia -2248 1914 1797 9 693 3060 186 31 22 chrUextra 14241144 14241863 -14762793 + SAR_DM Satellite Satellite 422 1146 -326 9 693 3553 168 8 10 chrUextra 14242791 14243500 -14761156 + SAR_DM Satellite Satellite 369 1076 -396 9 693 6416 18 10 0 chrUextra 14243610 14244332 -14760324 - LSU-rRNA_Dme rRNA rRNA -187 3713 2985 9 693 970 271 77 26 chrUextra 14244589 14245097 -14759559 - QUASIMODO_I LTR Gypsy 0 6060 5527 9 693 507 31 108 0 chrUextra 14245089 14245154 -14759502 + PROTOP_A DNA P 176 247 -858 9 693 6691 1 3 0 chrUextra 14245254 14245976 -14758680 - LSU-rRNA_Dme rRNA rRNA -1241 2659 1936 9 693 6564 3 3 0 chrUextra 14246076 14246798 -14757858 + FW_DM LINE Jockey 737 1460 -3232 9 693 5601 48 18 28 chrUextra 14246898 14247620 -14757036 + Gypsy12_LTR LTR Gypsy 85 799 -1537 9 693 3211 18 62 0 chrUextra 14247720 14248442 -14756214 - R1_DM LINE R1 -1544 3812 3046 9 693 4887 27 2 0 chrUextra 14248542 14249105 -14755551 - R1_DM LINE R1 -1659 3697 3134 9 693 1386 41 0 6 chrUextra 14249091 14249264 -14755392 - R1_DM LINE R1 -3063 2293 2122 9 693 703 75 0 0 chrUextra 14249364 14249457 -14755199 + ARS406_DM Unknown Unknown 97 189 -164 9 693 2603 203 65 20 chrUextra 14249376 14250085 -14754571 - SAR_DM Satellite Satellite -225 1247 507 9 693 6708 4 0 0 chrUextra 14250186 14250908 -14753748 - R2_DM LINE R2 -157 3450 2729 9 693 5531 18 3 57 chrUextra 14251008 14251730 -14752926 + BATUMI_I LTR Pao 2329 3011 -4952 9 693 5936 44 14 0 chrUextra 14251830 14252552 -14752104 + FW_DM LINE Jockey 191 922 -3770 9 693 321 151 65 52 chrUextra 14252652 14252729 -14751927 + DMCR1A LINE CR1 2203 2280 -2190 9 693 5488 9 13 16 chrUextra 14252738 14253374 -14751282 + DOC LINE Jockey 4 637 -4088 9 693 6496 11 1 3 chrUextra 14253474 14254196 -14750460 + Gypsy4_I LTR Gypsy 1757 2477 -3811 9 693 6186 33 0 0 chrUextra 14254296 14255018 -14749638 - R1_DM LINE R1 -2070 3286 2565 9 693 6578 1 0 0 chrUextra 14255118 14255840 -14748816 + R1_DM LINE R1 2562 3283 -2073 9 693 6464 11 0 7 chrUextra 14255940 14256662 -14747994 - CIRCE LINE Composite -1867 4489 3773 9 693 4979 5 0 0 chrUextra 14256762 14257316 -14747340 - DM176_I LTR Gypsy -666 5754 5201 9 693 1427 12 0 0 chrUextra 14257312 14257480 -14747176 - DM176_I LTR Gypsy -5167 1253 1086 9 693 3220 186 19 19 chrUextra 14257584 14258306 -14746350 - SAR_DM Satellite Satellite -321 1151 430 9 693 6311 8 0 0 chrUextra 14258406 14259128 -14745528 + DM297_I LTR Gypsy 4153 4874 -1293 9 693 393 266 28 50 chrUextra 14259229 14259411 -14745245 + CT-rich Low_complexity Low_complexity 1 178 0 9 693 2006 0 17 13 chrUextra 14260063 14260302 -14744354 - NTS_DM Other Other 0 240 1 9 693 1977 8 17 13 chrUextra 14260302 14260541 -14744115 - NTS_DM Other Other 0 240 1 9 693 1789 22 17 17 chrUextra 14260541 14260772 -14743884 - NTS_DM Other Other 0 240 10 9 693 28 29 0 0 chrUextra 14261475 14261510 -14743146 + AT_rich Low_complexity Low_complexity 1 35 0 9 693 1158 122 0 0 chrUextra 14261694 14262032 -14742624 + (TA)n Simple_repeat Simple_repeat 1 338 0 9 693 2957 41 0 11 chrUextra 14262033 14262404 -14742252 + ROVER-LTR_DM LTR Gypsy 1 367 0 9 693 1620 4 0 0 chrUextra 14262516 14262782 -14741874 + (CAAGA)n Simple_repeat Simple_repeat 1 266 0 9 693 2014 4 0 9 chrUextra 14262807 14263033 -14741623 - DIVER_LTR LTR Pao 0 224 1 9 693 1892 5 0 0 chrUextra 14263033 14263238 -14741418 - DIVER_I LTR Pao 0 5643 5439 9 693 6582 1 0 1 chrUextra 14263338 14264060 -14740596 - ROO_I LTR Pao -5178 3078 2358 9 693 385 341 26 31 chrUextra 14265016 14265418 -14739238 + BLASTOPIA_I LTR Gypsy 3541 4185 -703 9 693 3127 109 2 2 chrUextra 14267448 14267880 -14736776 - R1_DM LINE R1 -3817 1539 1108 9 693 1487 113 20 96 chrUextra 14267877 14268170 -14736486 - R1_DM LINE R1 -4646 710 440 9 693 6559 8 0 0 chrUextra 14268270 14268992 -14735664 + DOC2_DM LINE Jockey 2996 3717 -1076 9 693 6118 33 1 0 chrUextra 14269092 14269814 -14734842 + R1_DM LINE R1 2677 3399 -1957 9 693 660 214 0 0 chrUextra 14269918 14270063 -14734593 - ROVER-I_DM LTR Gypsy -450 6134 5990 9 693 3158 148 4 7 chrUextra 14270098 14270636 -14734020 - ROVER-I_DM LTR Gypsy -1276 5308 4773 9 693 2247 143 12 15 chrUextra 14270736 14271458 -14733198 + DMSAT6 Satellite Satellite 1 720 -74 9 693 6583 1 0 0 chrUextra 14271558 14272280 -14732376 + LSU-rRNA_Dme rRNA rRNA 370 1091 -2809 9 693 2236 186 11 7 chrUextra 14272380 14272394 -14732262 - SAR_DM Satellite Satellite -813 724 707 9 693 1464 58 0 0 chrUextra 14272394 14272583 -14732073 + ARS406_DM Unknown Unknown 1 189 -164 9 693 2236 186 11 7 chrUextra 14272583 14273102 -14731554 - SAR_DM Satellite Satellite -813 706 1 9 693 2856 27 0 0 chrUextra 14273209 14273545 -14731111 + FW_DM LINE Jockey 4353 4688 -4 9 693 2897 61 32 3 chrUextra 14273546 14273924 -14730732 - R1_DM LINE R1 -3966 1390 1002 9 693 2730 131 68 96 chrUextra 14274037 14274746 -14729910 + MAX_I LTR Pao 938 1626 -6288 9 693 6407 24 0 0 chrUextra 14274846 14275568 -14729088 - DIVER_I LTR Pao -2075 3568 2847 9 693 6089 0 3 7 chrUextra 14275668 14276390 -14728266 + DM412 LTR Gypsy 1052 1770 -5127 9 693 27 49 0 0 chrUextra 14276498 14276539 -14728117 + AT_rich Low_complexity Low_complexity 1 41 0 9 693 32 0 0 0 chrUextra 14276867 14276899 -14727757 + AT_rich Low_complexity Low_complexity 1 32 0 9 693 1683 0 0 0 chrUextra 14277031 14277212 -14727444 + SSU-rRNA_Dme rRNA rRNA 1 181 -1814 9 693 6705 1 0 3 chrUextra 14277312 14278034 -14726622 + LSU-rRNA_Dme rRNA rRNA 2632 3351 -549 9 693 1311 115 0 106 chrUextra 14278134 14278388 -14726268 + R1_DM LINE R1 450 676 -4680 9 693 3142 115 2 2 chrUextra 14278384 14278856 -14725800 + R1_DM LINE R1 1099 1570 -3786 9 693 926 0 0 0 chrUextra 14278956 14279065 -14725591 - I_DM LINE I -5785 446 338 9 693 235 235 20 0 chrUextra 14279262 14279313 -14725343 + (TATG)n Simple_repeat Simple_repeat 1 52 0 9 693 213 39 0 0 chrUextra 14279651 14279677 -14724979 + (ATG)n Simple_repeat Simple_repeat 3 28 0 9 693 6064 17 0 0 chrUextra 14279778 14280500 -14724156 + R1_DM LINE R1 1864 2585 -2771 9 693 237 108 0 0 chrUextra 14280750 14280787 -14723869 + (T)n Simple_repeat Simple_repeat 1 37 0 9 693 270 136 0 0 chrUextra 14280947 14280991 -14723665 + (CACCAT)n Simple_repeat Simple_repeat 4 47 0 9 693 3075 0 3 0 chrUextra 14281422 14281776 -14722880 + LSU-rRNA_Dme rRNA rRNA 3546 3900 0 9 693 22 56 0 0 chrUextra 14281848 14281884 -14722772 + AT_rich Low_complexity Low_complexity 1 36 0 9 693 246 150 0 0 chrUextra 14281889 14281929 -14722727 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 693 246 150 0 0 chrUextra 14281981 14282021 -14722635 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 693 6259 1 1 0 chrUextra 14282244 14282966 -14721690 + LSU-rRNA_Dme rRNA rRNA 2286 3008 -892 9 693 2336 73 7 43 chrUextra 14283068 14283788 -14720868 + DMSAT6 Satellite Satellite 1 694 -85 9 693 5748 15 4 8 chrUextra 14284710 14285432 -14719224 - ROO_I LTR Pao -4348 3908 3190 9 693 6178 4 1 0 chrUextra 14285532 14286254 -14718402 - R1_DM LINE R1 -302 5054 4332 9 86 5397 37 0 0 chrUextra 14286393 14287076 -14717580 - R1_DM LINE R1 -2388 2968 2286 9 694 5719 3 3 35 chrUextra 14287176 14287898 -14716758 + LSU-rRNA_Dme rRNA rRNA 91 789 -3111 9 694 5714 5 1 0 chrUextra 14287998 14288658 -14715998 + SSU-rRNA_Dme rRNA rRNA 1335 1995 0 9 694 548 16 0 0 chrUextra 14288820 14288884 -14715772 - NTS_DM Other Other -176 64 1 9 694 1408 20 20 20 chrUextra 14288884 14289087 -14715569 - NTS_DM Other Other 0 240 38 9 694 817 0 0 0 chrUextra 14289087 14289183 -14715473 - NTS_DM Other Other -107 133 38 9 694 813 19 9 27 chrUextra 14289183 14289294 -14715362 - NTS_DM Other Other -107 133 25 9 694 21 57 0 0 chrUextra 14289320 14289355 -14715301 + AT_rich Low_complexity Low_complexity 1 35 0 9 694 1234 24 0 6 chrUextra 14289355 14289520 -14715136 - NTS_DM Other Other -39 201 38 9 694 34 24 0 0 chrUextra 14289822 14289863 -14714793 + AT_rich Low_complexity Low_complexity 1 41 0 9 694 21 95 0 0 chrUextra 14290077 14290140 -14714516 + AT_rich Low_complexity Low_complexity 1 63 0 9 694 1842 0 0 0 chrUextra 14290152 14290364 -14714292 + LSU-rRNA_Dme rRNA rRNA 1 212 -3688 9 694 240 0 0 86 chrUextra 14290464 14290499 -14714157 - NTS_DM Other Other -184 56 25 9 694 22 56 0 0 chrUextra 14290524 14290560 -14714096 + AT_rich Low_complexity Low_complexity 1 36 0 9 694 255 125 0 0 chrUextra 14290573 14290613 -14714043 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 694 246 150 0 0 chrUextra 14290749 14290789 -14713867 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 694 246 150 0 0 chrUextra 14290841 14290881 -14713775 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 694 22 56 0 0 chrUextra 14290886 14290922 -14713734 + AT_rich Low_complexity Low_complexity 1 36 0 9 694 1664 5 0 0 chrUextra 14290994 14291186 -14713470 - LSU-rRNA_Dme rRNA rRNA 0 3900 3709 9 694 246 150 0 0 chrUextra 14291354 14291394 -14713262 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 694 246 150 0 0 chrUextra 14291446 14291486 -14713170 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 694 255 125 0 0 chrUextra 14291529 14291569 -14713087 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 694 22 56 0 0 chrUextra 14291582 14291618 -14713038 + AT_rich Low_complexity Low_complexity 1 36 0 9 694 870 9 0 27 chrUextra 14291644 14291756 -14712900 + NTS_DM Other Other 25 133 -107 9 694 1252 18 0 6 chrUextra 14291756 14291921 -14712735 + NTS_DM Other Other 38 201 -39 9 694 240 0 0 86 chrUextra 14291973 14292008 -14712648 + NTS_DM Other Other 25 56 -184 9 694 1088 7 25 19 chrUextra 14292110 14292267 -14712389 + NTS_DM Other Other 83 240 0 9 694 1271 6 0 24 chrUextra 14292267 14292433 -14712223 + NTS_DM Other Other 1 162 -78 9 694 488 119 36 0 chrUextra 14292543 14292627 -14712029 + NTS_DM Other Other 4 90 -150 9 694 772 130 0 7 chrUextra 14292930 14293068 -14711588 + MDG1_LTR LTR Gypsy 276 412 -30 9 694 3726 84 21 9 chrUextra 14293068 14293644 -14711012 + MDG1_I LTR Gypsy 1 583 -6013 9 694 3019 179 7 7 chrUextra 14294577 14295265 -14709391 - SAR_DM Satellite Satellite -593 879 192 9 694 791 102 0 0 chrUextra 14295169 14295296 -14709360 + ARS406_DM Unknown Unknown 1 127 -226 9 694 6095 10 3 0 chrUextra 14295396 14296118 -14708538 + R1_DM LINE R1 56 779 -4577 9 694 4118 88 61 7 chrUextra 14296218 14296940 -14707716 - STALKER4_I LTR Gypsy -33 6497 5737 9 694 5428 1 5 6 chrUextra 14297109 14297762 -14706894 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1137 9 694 299 211 13 0 chrUextra 14297862 14297938 -14706718 - XDMR_DM Unknown Unknown -29 331 255 9 694 961 172 40 8 chrUextra 14297875 14298582 -14706074 + SAR_DM Satellite Satellite 1 729 -1040 9 694 3273 227 8 3 chrUextra 14298685 14299406 -14705250 + Gypsy2_I LTR Gypsy 5144 5868 -267 9 694 6200 0 4 1 chrUextra 14299509 14300228 -14704428 + SSU-rRNA_Dme rRNA rRNA 253 973 -1022 9 694 610 150 0 8 chrUextra 14300330 14300451 -14704205 - ARS406_DM Unknown Unknown -233 120 1 9 694 2265 202 13 10 chrUextra 14300353 14301050 -14703606 + SAR_DM Satellite Satellite 1 699 -645 9 694 5702 44 1 0 chrUextra 14301150 14301872 -14702784 + R1_DM LINE R1 1102 1824 -3532 9 694 357 189 0 0 chrUextra 14301972 14302067 -14702589 + T-rich Low_complexity Low_complexity 4 98 0 9 694 4804 68 2 3 chrUextra 14302802 14303513 -14701143 - BATUMI_I LTR Pao -1118 6796 5844 9 694 2434 188 50 44 chrUextra 14303616 14304338 -14700318 + TART LINE telomeric 8952 9562 -4915 9 694 1663 82 0 8 chrUextra 14305260 14305506 -14699150 + BATUMI_I LTR Pao 7720 7963 0 9 694 1560 45 4 43 chrUextra 14305532 14305765 -14698891 + BATUMI_LTR LTR Pao 49 272 0 9 694 1766 32 0 0 chrUextra 14305765 14305982 -14698674 + ROO_I LTR Pao 3513 3729 -4527 9 694 2259 104 14 15 chrUextra 14306904 14307626 -14697030 - DMSAT6 Satellite Satellite -86 720 1 9 694 3212 0 0 0 chrUextra 14307726 14308094 -14696562 + LSU-rRNA_Dme rRNA rRNA 2214 2581 -1319 9 694 3038 8 0 3 chrUextra 14308092 14308448 -14696208 + R2_DM LINE R2 3 357 -3250 9 694 3465 30 19 0 chrUextra 14309370 14309798 -14694858 + CIRCE LINE Composite 5921 6356 0 9 694 2413 27 0 0 chrUextra 14309798 14310092 -14694564 + CIRCE LINE Composite 1 294 -6062 9 694 2609 6 0 6 chrUextra 14310192 14310511 -14694145 - QUASIMODO_LTR LTR Gypsy -341 317 1 9 694 3185 2 0 0 chrUextra 14310511 14310914 -14693742 - QUASIMODO_I LTR Gypsy 0 6060 5658 9 694 5873 22 3 1 chrUextra 14311014 14311736 -14692920 - R1_DM LINE R1 -2807 2549 1827 9 694 229 0 0 0 chrUextra 14311836 14311862 -14692794 - R1_DM LINE R1 -129 5227 5202 9 694 2131 92 115 13 chrUextra 14311862 14312236 -14692420 - MDG1_LTR LTR Gypsy -30 412 1 9 694 1174 53 562 6 chrUextra 14312236 14312558 -14692098 - MDG1_I LTR Gypsy 0 6596 6096 9 694 765 72 79 7 chrUextra 14313480 14313620 -14691036 + TRANSIB2 DNA Transib 2071 2220 -624 9 694 1253 81 115 7 chrUextra 14313979 14314202 -14690454 + TRANSIB2 DNA Transib 2229 2444 -400 9 694 6254 7 0 0 chrUextra 14314302 14315024 -14689632 - DM1731_I LTR Copia -2355 1621 900 9 694 1441 5 25 15 chrUextra 14315124 14315322 -14689334 + NTS_DM Other Other 41 240 0 9 694 1861 0 17 13 chrUextra 14315322 14315561 -14689095 + NTS_DM Other Other 1 240 0 9 694 1861 0 17 13 chrUextra 14315561 14315800 -14688856 + NTS_DM Other Other 1 240 0 9 694 400 0 0 0 chrUextra 14315800 14315846 -14688810 + NTS_DM Other Other 1 46 -194 9 694 317 170 29 29 chrUextra 14315946 14316049 -14688607 + XDMR_DM Unknown Unknown 258 360 0 9 694 2713 183 14 27 chrUextra 14315963 14316666 -14687990 - SAR_DM Satellite Satellite -354 1118 425 9 694 1986 174 138 22 chrUextra 14316786 14317366 -14687290 - TART LINE telomeric -4946 9531 8521 9 694 5940 22 4 0 chrUextra 14317591 14318312 -14686344 + DMCR1A LINE CR1 2353 3076 -1394 9 694 1742 180 13 7 chrUextra 14318413 14319118 -14685538 + SAR_DM Satellite Satellite 1 708 -685 9 694 1001 58 0 0 chrUextra 14318995 14319134 -14685522 - ARS406_DM Unknown Unknown -164 189 51 9 694 1306 53 0 0 chrUextra 14319235 14319422 -14685234 - BATUMI_I LTR Pao -474 7489 7303 9 694 3833 34 8 12 chrUextra 14319445 14319956 -14684700 + BATUMI_I LTR Pao 6427 6935 -1028 9 694 674 107 0 0 chrUextra 14320056 14320168 -14684488 - ARS406_DM Unknown Unknown -241 112 1 9 694 3045 182 7 8 chrUextra 14320072 14320777 -14683879 + SAR_DM Satellite Satellite 192 895 -577 9 694 893 180 80 90 chrUextra 14321128 14321440 -14683216 + TIRANT_LTR LTR Gypsy 1 309 -108 9 694 5808 19 37 0 chrUextra 14321700 14322422 -14682234 - STALKER4_I LTR Gypsy -1549 4981 4233 9 694 3671 92 91 26 chrUextra 14322527 14323185 -14681471 - Gypsy12_I LTR Gypsy -4845 701 1 9 694 327 125 0 18 chrUextra 14323185 14323242 -14681414 - Gypsy12_LTR LTR Gypsy 0 2336 2281 9 694 21 89 0 0 chrUextra 14323409 14323465 -14681191 + AT_rich Low_complexity Low_complexity 1 56 0 9 694 5061 0 2 2 chrUextra 14323484 14324066 -14680590 - SSU-rRNA_Dme rRNA rRNA 0 1995 1414 9 694 262 54 0 0 chrUextra 14324166 14324203 -14680453 + PROTOP_B DNA P 1117 1153 0 9 694 21 89 0 0 chrUextra 14324741 14324797 -14679859 + AT_rich Low_complexity Low_complexity 1 56 0 9 694 476 14 53 40 chrUextra 14324988 14325064 -14679592 + NTS_DM Other Other 164 240 0 9 694 1128 8 0 0 chrUextra 14325064 14325197 -14679459 + NTS_DM Other Other 1 133 -107 9 694 1252 18 0 6 chrUextra 14325197 14325362 -14679294 + NTS_DM Other Other 38 201 -39 9 694 21 57 0 0 chrUextra 14325362 14325397 -14679259 + AT_rich Low_complexity Low_complexity 1 35 0 9 694 832 9 9 27 chrUextra 14325423 14325534 -14679122 + NTS_DM Other Other 25 133 -107 9 694 1268 24 0 12 chrUextra 14325534 14325705 -14678951 + NTS_DM Other Other 38 206 -34 9 694 2275 171 11 6 chrUextra 14326636 14327354 -14677302 + SAR_DM Satellite Satellite 1 721 -677 9 694 6028 3 0 3 chrUextra 14327454 14328173 -14676483 - G_DM LINE Jockey -1545 2801 2085 9 694 2680 164 24 77 chrUextra 14328276 14328995 -14675661 - SAR_DM Satellite Satellite -446 1026 346 9 694 3279 170 11 7 chrUextra 14329103 14329819 -14674837 + SAR_DM Satellite Satellite 326 1044 -428 9 694 6321 1 0 0 chrUextra 14329921 14330642 -14674014 - SSU-rRNA_Dme rRNA rRNA -867 1128 408 9 694 3185 168 10 7 chrUextra 14330742 14331432 -14673224 - SAR_DM Satellite Satellite -535 937 246 9 694 413 113 0 0 chrUextra 14331392 14331463 -14673193 + ARS406_DM Unknown Unknown 1 71 -282 9 694 5633 39 0 0 chrUextra 14331564 14332286 -14672370 + IDEFIX_I LTR Gypsy 914 1635 -3993 9 694 2948 188 13 16 chrUextra 14332386 14333107 -14671549 - SAR_DM Satellite Satellite -649 718 1 9 694 584 164 8 16 chrUextra 14333209 14333333 -14671323 - ARS406_DM Unknown Unknown -230 123 1 9 694 2887 199 24 9 chrUextra 14333229 14333925 -14670731 + SAR_DM Satellite Satellite 185 891 -581 9 694 2886 268 1 1 chrUextra 14334851 14335564 -14669092 + Gypsy6_I LTR Gypsy 5636 6348 -664 9 694 2463 28 0 0 chrUextra 14335697 14335983 -14668673 + Gypsy3_I LTR Gypsy 5892 6177 0 9 694 2373 88 43 79 chrUextra 14335983 14336390 -14668266 + Gypsy6A_LTR LTR Gypsy 1 420 0 9 694 1877 216 26 12 chrUextra 14336496 14337198 -14667458 + SAR_DM Satellite Satellite 1 711 -668 9 694 3023 181 49 4 chrUextra 14337313 14338025 -14666631 + SAR_DM Satellite Satellite 332 1075 -397 9 694 5516 24 3 15 chrUextra 14338133 14338854 -14665802 - DM176_I LTR Gypsy -5647 773 62 9 694 22 35 0 0 chrUextra 14339074 14339103 -14665553 + AT_rich Low_complexity Low_complexity 1 29 0 9 694 37 39 0 0 chrUextra 14339204 14339255 -14665401 + AT_rich Low_complexity Low_complexity 1 51 0 9 694 28 48 0 0 chrUextra 14339610 14339652 -14665004 + AT_rich Low_complexity Low_complexity 1 42 0 9 694 6179 14 1 0 chrUextra 14339775 14340496 -14664160 - Invader2_I LTR Gypsy -540 4052 3331 9 694 1889 46 4 0 chrUextra 14341080 14341317 -14663339 - DMCR1A LINE CR1 -2012 2458 2221 9 694 6612 0 0 0 chrUextra 14341419 14342138 -14662518 - MAX_I LTR Pao -1294 6620 5902 9 694 3392 178 6 7 chrUextra 14342251 14342959 -14661697 + SAR_DM Satellite Satellite 192 898 -574 9 694 6533 1 0 0 chrUextra 14343059 14343780 -14660876 - DM1731_I LTR Copia -1167 2809 2089 9 694 624 320 28 30 chrUextra 14343880 14344268 -14660388 + MICROPIA_I LTR Gypsy 350 719 -3380 9 694 2961 175 8 3 chrUextra 14344701 14345422 -14659234 + SAR_DM Satellite Satellite 1 724 -582 9 694 931 9 0 0 chrUextra 14345522 14345633 -14659023 - NTS_DM Other Other -92 148 38 9 694 881 18 0 27 chrUextra 14345633 14345745 -14658911 - NTS_DM Other Other -107 133 25 9 694 1304 18 0 6 chrUextra 14345797 14345962 -14658694 - NTS_DM Other Other -39 201 38 9 694 907 9 0 27 chrUextra 14345962 14346074 -14658582 - NTS_DM Other Other -107 133 25 9 694 22 56 0 0 chrUextra 14346100 14346136 -14658520 + AT_rich Low_complexity Low_complexity 1 36 0 9 694 273 173 0 19 chrUextra 14346149 14346202 -14658454 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2569 9 694 6397 1 1 0 chrUextra 14346344 14347064 -14657592 - ROO_I LTR Pao -6349 1907 1187 9 694 3905 186 4 0 chrUextra 14347164 14347878 -14656778 + ROVER-I_DM LTR Gypsy 3726 4442 -2142 9 694 6479 1 1 0 chrUextra 14347985 14348706 -14655950 - Invader3_I LTR Gypsy -495 4393 3672 9 694 652 0 0 0 chrUextra 14348806 14348881 -14655775 + QUASIMODO_LTR LTR Gypsy 584 658 0 9 694 3040 6 88 0 chrUextra 14348881 14349527 -14655129 + QUASIMODO_I LTR Gypsy 1 703 -5357 9 694 1723 0 0 0 chrUextra 14349627 14349820 -14654836 - HMSBEAGLE_I LTR Gypsy -6336 193 1 9 694 2421 8 0 0 chrUextra 14349819 14350085 -14654571 - DMLTR5 LTR Gypsy 0 266 1 9 694 1158 123 0 0 chrUextra 14350085 14350345 -14654311 + (TA)n Simple_repeat Simple_repeat 1 260 0 9 694 22 56 0 0 chrUextra 14350544 14350580 -14654076 + AT_rich Low_complexity Low_complexity 1 36 0 9 694 262 150 0 0 chrUextra 14350585 14350625 -14654031 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 694 262 150 0 0 chrUextra 14350677 14350717 -14653939 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 694 262 150 0 0 chrUextra 14350769 14350809 -14653847 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 694 269 125 0 0 chrUextra 14350852 14350892 -14653764 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 694 22 56 0 0 chrUextra 14350905 14350941 -14653715 + AT_rich Low_complexity Low_complexity 1 36 0 9 694 886 18 0 27 chrUextra 14350967 14351079 -14653577 + NTS_DM Other Other 25 133 -107 9 694 771 0 11 0 chrUextra 14351079 14351169 -14653487 + NTS_DM Other Other 38 128 -112 9 694 6145 15 4 1 chrUextra 14352914 14353632 -14651024 - R1_DM LINE R1 -897 4459 3740 9 694 2370 0 4 4 chrUextra 14353732 14353998 -14650658 - LSU-rRNA_Dme rRNA rRNA -1847 2053 1788 9 694 3611 2 5 2 chrUextra 14354042 14354453 -14650203 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1377 9 694 3324 97 27 23 chrUextra 14354561 14355113 -14649543 - TART LINE telomeric -11181 3296 2777 9 694 521 141 39 163 chrUextra 14355120 14355273 -14649383 - TART LINE telomeric -11115 3362 3229 9 694 21 0 0 0 chrUextra 14355817 14355838 -14648818 + AT_rich Low_complexity Low_complexity 1 21 0 9 694 42 57 0 0 chrUextra 14356013 14356083 -14648573 + AT_rich Low_complexity Low_complexity 1 70 0 9 694 6402 1 3 4 chrUextra 14356195 14356916 -14647740 + LSU-rRNA_Dme rRNA rRNA 957 1676 -2224 9 694 2792 6 0 9 chrUextra 14357016 14357343 -14647313 + BATUMI_I LTR Pao 7640 7963 0 9 694 2087 42 3 34 chrUextra 14357343 14357635 -14647021 + BATUMI_I LTR Pao 7002 7284 -679 9 694 47 0 0 0 chrUextra 14358058 14358105 -14646551 + AT_rich Low_complexity Low_complexity 1 47 0 9 694 1827 23 0 65 chrUextra 14358121 14358400 -14646256 - Gypsy4_I LTR Gypsy -5911 377 117 9 694 1070 70 7 0 chrUextra 14358416 14358558 -14646098 - Gypsy4_LTR LTR Gypsy 0 287 145 9 694 3591 109 39 69 chrUextra 14358658 14359379 -14645277 + PROTOP_B DNA P 417 1115 -38 9 694 2446 258 14 14 chrUextra 14359480 14360185 -14644471 + ROVER-I_DM LTR Gypsy 2647 3351 -3233 9 694 3045 179 30 24 chrUextra 14360300 14361021 -14643635 + SAR_DM Satellite Satellite 198 923 -549 9 694 5494 3 40 6 chrUextra 14361121 14361842 -14642814 + MDG1_I LTR Gypsy 5812 6557 -39 9 694 3281 167 17 24 chrUextra 14361944 14362663 -14641993 + SAR_DM Satellite Satellite 274 987 -485 9 694 5092 104 28 0 chrUextra 14362763 14363484 -14641172 + Gypsy12_I LTR Gypsy 3209 3949 -1597 9 694 3835 0 0 0 chrUextra 14363584 14364005 -14640651 - DM1731_I LTR Copia -3555 421 1 9 694 2658 13 0 0 chrUextra 14364005 14364305 -14640351 - DM1731_LTR LTR Copia 0 336 37 9 694 3977 40 137 0 chrUextra 14364405 14365126 -14639530 + DMRT1B LINE R1 3552 4371 -812 9 694 5421 7 0 0 chrUextra 14365226 14365826 -14638830 - DOC LINE Jockey -4123 602 3 9 694 3034 175 31 21 chrUextra 14366047 14366766 -14637890 + SAR_DM Satellite Satellite 198 923 -549 9 694 1076 167 30 11 chrUextra 14366868 14367368 -14637288 - SAR_DM Satellite Satellite -842 722 116 9 694 514 197 8 0 chrUextra 14367368 14367485 -14637171 + ARS406_DM Unknown Unknown 1 118 -235 9 694 1076 167 30 11 chrUextra 14367485 14367578 -14637078 - SAR_DM Satellite Satellite -842 115 1 9 694 34 24 0 0 chrUextra 14367963 14368004 -14636652 + AT_rich Low_complexity Low_complexity 1 41 0 9 694 794 9 0 28 chrUextra 14368510 14368619 -14636037 + NTS_DM Other Other 57 162 -78 9 694 489 131 36 0 chrUextra 14368729 14368813 -14635843 + NTS_DM Other Other 4 90 -150 9 694 28 48 0 0 chrUextra 14369086 14369128 -14635528 + AT_rich Low_complexity Low_complexity 1 42 0 9 694 432 193 0 0 chrUextra 14369331 14369445 -14635211 + (AATAG)n Simple_repeat Simple_repeat 5 118 0 9 694 6143 29 11 0 chrUextra 14370152 14370873 -14633783 + R1_DM LINE R1 1336 2064 -3292 9 694 6245 10 0 0 chrUextra 14370973 14371694 -14632962 - QUASIMODO_I LTR Gypsy -2432 3628 2908 9 694 5755 22 1 0 chrUextra 14371794 14372465 -14632191 + FW_DM LINE Jockey 3162 3833 -859 9 694 364 0 0 0 chrUextra 14372469 14372515 -14632141 + FW_DM LINE Jockey 4138 4183 -509 9 694 494 133 0 0 chrUextra 14372617 14372707 -14631949 + ARS406_DM Unknown Unknown 22 111 -242 9 694 2462 76 32 20 chrUextra 14372707 14373123 -14631533 + Gypsy6A_LTR LTR Gypsy 1 420 0 9 694 949 162 15 5 chrUextra 14373129 14373327 -14631329 - SAR_DM Satellite Satellite -581 891 692 9 694 5310 41 0 5 chrUextra 14373446 14374108 -14630548 - BATUMI_I LTR Pao 0 7963 7305 9 694 6278 3 7 8 chrUextra 14374257 14374976 -14629680 - DMRT1B LINE R1 -2293 2890 2173 9 694 6210 7 0 0 chrUextra 14375101 14375799 -14628857 + Invader2_I LTR Gypsy 620 1317 -3275 9 694 6127 14 39 3 chrUextra 14375899 14376620 -14628036 - R1_DM LINE R1 -611 4745 3999 9 694 1345 0 0 0 chrUextra 14377541 14377691 -14626965 - GTWIN_I LTR Gypsy -6271 150 1 9 694 4542 0 0 0 chrUextra 14377691 14378186 -14626470 - GTWIN_LTR LTR Gypsy 0 495 1 9 694 681 13 0 0 chrUextra 14378186 14378262 -14626394 - GTWIN_I LTR Gypsy 0 6421 6346 9 694 6397 1 0 0 chrUextra 14378362 14379083 -14625573 - LSU-rRNA_Dme rRNA rRNA -2807 1093 373 9 694 1566 273 32 63 chrUextra 14379192 14379875 -14624781 - Gypsy12_LTR LTR Gypsy -1258 1078 417 9 694 6255 0 4 0 chrUextra 14380004 14380723 -14623933 + ROO_I LTR Pao 4339 5060 -3196 9 694 1078 163 64 5 chrUextra 14380919 14381122 -14623534 + DNAREP1_DM LINE Penelope 22 236 -358 9 694 21 57 0 0 chrUextra 14381163 14381198 -14623458 + AT_rich Low_complexity Low_complexity 1 35 0 9 694 427 224 0 30 chrUextra 14381647 14381748 -14622908 + TIRANT_I LTR Gypsy 7595 7692 0 9 694 1239 92 0 6 chrUextra 14382191 14382366 -14622290 + Gypsy10_LTR LTR Gypsy 163 336 -28 9 694 4846 60 3 3 chrUextra 14382468 14383085 -14621571 + R1_DM LINE R1 1 617 -4739 9 694 788 30 10 19 chrUextra 14383084 14383187 -14621469 + R1_DM LINE R1 1101 1202 -4154 9 694 6465 4 0 3 chrUextra 14383289 14384009 -14620647 - Invader1_I LTR Gypsy -626 2560 1843 9 694 6094 0 46 0 chrUextra 14384109 14384830 -14619826 - ROO_I LTR Pao -7434 822 69 9 694 3089 184 12 11 chrUextra 14384930 14385648 -14619008 - SAR_DM Satellite Satellite -555 917 199 9 694 1107 23 0 0 chrUextra 14385751 14385881 -14618775 + CIRCE LINE Composite 4851 4980 -1376 9 694 1785 26 9 13 chrUextra 14386238 14386471 -14618185 + CIRCE LINE Composite 4981 5212 -1144 9 694 6596 1 1 0 chrUextra 14386572 14387293 -14617363 - LSU-rRNA_Dme rRNA rRNA -195 3705 2984 9 694 1620 12 0 0 chrUextra 14387394 14387826 -14616830 + (TTCTC)n Simple_repeat Simple_repeat 1 432 0 9 694 432 86 0 0 chrUextra 14387841 14387911 -14616745 + (GAGAA)n Simple_repeat Simple_repeat 3 72 0 9 694 1208 61 0 6 chrUextra 14387934 14388114 -14616542 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 9 694 3281 177 14 11 chrUextra 14388214 14388935 -14615721 + SAR_DM Satellite Satellite 262 984 -488 9 694 1140 312 10 12 chrUextra 14389035 14389515 -14615141 - Invader6_I LTR Gypsy -2195 1904 1426 9 694 833 71 79 0 chrUextra 14389513 14389639 -14615017 + Gypsy7_I LTR Gypsy 3199 3334 -1650 9 694 863 43 17 0 chrUextra 14389640 14389756 -14614900 + Gypsy7_I LTR Gypsy 3615 3732 -1252 9 694 1594 191 81 29 chrUextra 14390096 14390577 -14614079 + STALKER4_I LTR Gypsy 885 1390 -5140 9 694 6170 0 3 0 chrUextra 14390677 14391398 -14613258 + FW_DM LINE Jockey 2859 3581 -1111 9 694 6116 0 0 0 chrUextra 14391503 14392219 -14612437 + BLOOD_I LTR Gypsy 2413 3128 -3485 9 694 6113 4 28 0 chrUextra 14392319 14393040 -14611616 - FW_DM LINE Jockey -447 4245 3505 9 694 615 13 13 0 chrUextra 14393140 14393215 -14611441 - NTS_DM Other Other -164 76 1 9 694 1756 17 17 17 chrUextra 14393215 14393455 -14611201 - NTS_DM Other Other 0 240 1 9 694 1756 17 17 17 chrUextra 14393455 14393695 -14610961 - NTS_DM Other Other 0 240 1 9 694 1002 25 36 24 chrUextra 14393695 14393861 -14610795 - NTS_DM Other Other 0 240 73 9 694 3745 23 8 19 chrUextra 14393961 14394441 -14610215 - CIRCE LINE Composite -3994 2362 1888 9 694 579 296 42 57 chrUextra 14394106 14394508 -14610148 - Gypsy12_I LTR Gypsy -1316 4230 3835 9 694 1337 30 0 0 chrUextra 14394517 14394682 -14609974 - CIRCE LINE Composite -4474 1882 1718 9 694 28 48 0 0 chrUextra 14395619 14395661 -14608995 + AT_rich Low_complexity Low_complexity 1 42 0 9 694 488 119 36 0 chrUextra 14395934 14396018 -14608638 - NTS_DM Other Other -150 90 4 9 694 1264 6 6 18 chrUextra 14396128 14396292 -14608364 - NTS_DM Other Other -78 162 1 9 694 6158 3 0 0 chrUextra 14396424 14397145 -14607511 + QUASIMODO_I LTR Gypsy 1870 2590 -3470 9 694 5726 24 40 1 chrUextra 14397245 14397966 -14606690 + Gypsy4_I LTR Gypsy 1154 1902 -4386 9 694 5708 21 76 0 chrUextra 14398066 14398787 -14605869 - R1_DM LINE R1 -7 5349 4574 9 694 322 178 50 101 chrUextra 14398994 14399113 -14605543 - Copia_I LTR Copia -80 4513 4401 9 694 22 56 0 0 chrUextra 14399158 14399194 -14605462 + AT_rich Low_complexity Low_complexity 1 36 0 9 694 1163 190 58 8 chrUextra 14399348 14399608 -14605048 + HETA LINE telomeric 4031 4303 -1778 9 694 5466 50 1 1 chrUextra 14399708 14400429 -14604227 - IVK_DM LINE I -2376 3026 2306 9 694 1871 0 0 0 chrUextra 14400529 14400748 -14603908 - HMSBEAGLE_I LTR Gypsy -6310 219 1 9 694 2316 8 0 0 chrUextra 14400747 14401013 -14603643 - DMLTR5 LTR Gypsy 0 266 1 9 694 2040 0 0 0 chrUextra 14401013 14401250 -14603406 + SSU-rRNA_Dme rRNA rRNA 700 936 -1059 9 694 3178 164 22 7 chrUextra 14401350 14402043 -14602613 + SAR_DM Satellite Satellite 374 1076 -396 9 694 5779 36 0 0 chrUextra 14402171 14402892 -14601764 - R1_DM LINE R1 -1965 3391 2671 9 694 6161 0 1 1 chrUextra 14402992 14403713 -14600943 - R1_DM LINE R1 -3157 2199 1479 9 694 2833 242 6 3 chrUextra 14403813 14404534 -14600122 + TABOR_I LTR Gypsy 3809 4531 -1805 9 694 6126 7 7 3 chrUextra 14404634 14405355 -14599301 - TART_B1 LINE telomeric -2069 8585 7862 9 694 790 70 9 0 chrUextra 14405455 14405569 -14599087 - R1_DM LINE R1 -5218 138 24 9 694 4675 23 2 0 chrUextra 14405605 14406176 -14598480 - R1_DM LINE R1 -2 5354 4783 9 694 267 53 0 17 chrUextra 14406281 14406339 -14598317 - NTS_DM Other Other -76 164 108 9 694 802 115 0 0 chrUextra 14406347 14406477 -14598179 - NTS_DM Other Other -103 137 8 9 694 259 146 21 0 chrUextra 14406575 14406623 -14598033 - NTS_DM Other Other -191 49 1 9 694 965 149 20 5 chrUextra 14406654 14406856 -14597800 - NTS_DM Other Other -35 205 1 9 694 2090 169 11 4 chrUextra 14407097 14407550 -14597106 - SAR_DM Satellite Satellite -683 789 334 9 694 2026 8 0 19 chrUextra 14407550 14407818 -14596838 - DOC LINE Jockey -3 4722 4460 9 694 3429 232 11 32 chrUextra 14407920 14409460 -14595196 - SAR_DM Satellite Satellite -414 1507 1 9 694 5787 23 1 0 chrUextra 14409560 14410262 -14594394 + R1_DM LINE R1 4654 5356 0 9 694 3050 183 8 8 chrUextra 14410381 14411102 -14593554 - SAR_DM Satellite Satellite -515 957 237 9 694 1320 21 30 20 chrUextra 14411202 14411399 -14593257 + NTS_DM Other Other 42 240 0 9 694 843 6 365 17 chrUextra 14411399 14411577 -14593079 + NTS_DM Other Other 1 240 0 9 694 1756 17 17 17 chrUextra 14411577 14411817 -14592839 + NTS_DM Other Other 1 240 0 9 694 861 28 0 0 chrUextra 14411817 14411923 -14592733 + NTS_DM Other Other 1 106 -134 9 694 2862 141 26 4 chrUextra 14412029 14412644 -14592012 - BS3_DM LINE Jockey -1374 416 1 9 694 263 196 30 20 chrUextra 14412645 14412744 -14591912 - MDG1_LTR LTR Gypsy -30 412 313 9 694 2937 176 13 20 chrUextra 14412844 14413547 -14591109 + SAR_DM Satellite Satellite 421 1118 -354 9 694 355 192 30 10 chrUextra 14413465 14413565 -14591091 - XDMR_DM Unknown Unknown 0 360 259 9 694 3166 174 10 11 chrUextra 14413665 14414386 -14590270 - SAR_DM Satellite Satellite -486 986 267 9 694 752 266 89 37 chrUextra 14414487 14414995 -14589661 - QUASIMODO_I LTR Gypsy 0 6060 5527 9 694 1506 45 41 0 chrUextra 14414987 14415207 -14589449 + PROTOP_B DNA P 176 404 -749 9 694 3426 71 4 4 chrUextra 14415307 14415786 -14588870 - R1_DM LINE R1 -4877 479 1 9 694 1740 19 0 0 chrUextra 14415821 14416028 -14588628 - R1_DM LINE R1 -2 5354 5148 9 694 3074 176 14 12 chrUextra 14416128 14416849 -14587807 - SAR_DM Satellite Satellite -447 1025 304 9 694 1014 17 0 0 chrUextra 14417550 14417670 -14586986 + (TTCTC)n Simple_repeat Simple_repeat 5 124 0 9 695 29 28 0 0 chrUextra 14418455 14418491 -14586165 + AT_rich Low_complexity Low_complexity 1 36 0 9 695 5927 21 0 4 chrUextra 14418592 14419312 -14585344 - Gypsy4_I LTR Gypsy -5103 1185 469 9 695 504 188 0 0 chrUextra 14420002 14420130 -14584526 + (CTATT)n Simple_repeat Simple_repeat 2 129 0 9 695 1620 4 0 0 chrUextra 14420233 14420508 -14584148 + (CACAA)n Simple_repeat Simple_repeat 1 275 0 9 695 3276 7 0 77 chrUextra 14420511 14420954 -14583702 - DM412B_LTR LTR Gypsy -89 482 74 9 695 6206 1 0 1 chrUextra 14421054 14421775 -14582881 + FW_DM LINE Jockey 1945 2664 -2028 9 695 5921 24 0 0 chrUextra 14421875 14422596 -14582060 - R1_DM LINE R1 -2324 3032 2312 9 695 917 82 8 19 chrUextra 14422696 14423417 -14581239 + RSP Satellite Satellite 1 713 0 9 695 6171 0 1 0 chrUextra 14423517 14424238 -14580418 + ROO_I LTR Pao 1847 2568 -5688 9 695 6035 14 0 4 chrUextra 14424338 14425059 -14579597 - Gypsy4_I LTR Gypsy -5125 1163 446 9 695 374 307 0 0 chrUextra 14425190 14425317 -14579339 + MICROPIA_I LTR Gypsy 3668 3794 -682 9 695 314 299 101 9 chrUextra 14425403 14425616 -14579040 + MICROPIA_I LTR Gypsy 3434 3850 -626 9 695 323 183 96 0 chrUextra 14425702 14425806 -14578850 - PROTOP DNA P -232 4248 4135 9 695 23 0 0 0 chrUextra 14425838 14425861 -14578795 + AT_rich Low_complexity Low_complexity 1 23 0 9 695 5937 10 0 1 chrUextra 14425980 14426701 -14577955 + ROO_I LTR Pao 2739 3458 -4798 9 695 4730 54 3 54 chrUextra 14426801 14427522 -14577134 + BATUMI_I LTR Pao 2512 3195 -4768 9 695 6193 0 0 0 chrUextra 14427622 14428343 -14576313 + ROO_I LTR Pao 6675 7395 -861 9 695 6118 3 1 4 chrUextra 14428445 14429164 -14575492 - LSU-rRNA_Dme rRNA rRNA -2328 1572 856 9 695 6172 1 0 3 chrUextra 14429264 14429985 -14574671 - STALKER4_I LTR Gypsy -2298 4232 3514 9 695 3048 182 8 8 chrUextra 14430097 14430806 -14573850 + SAR_DM Satellite Satellite 209 917 -555 9 695 459 169 0 11 chrUextra 14430906 14430996 -14573660 - HETRP_DM Satellite Satellite -255 1617 1529 9 695 655 186 7 14 chrUextra 14431136 14431278 -14573378 - HETRP_DM Satellite Satellite -203 1669 1529 9 695 593 207 7 14 chrUextra 14431413 14431555 -14573101 - HETRP_DM Satellite Satellite -203 1669 1529 9 695 3639 28 56 0 chrUextra 14431727 14432330 -14572326 - R1_DM LINE R1 -2326 3030 2394 9 695 966 17 0 0 chrUextra 14432332 14432448 -14572208 - R1_DM LINE R1 -3291 2065 1950 9 695 2962 185 8 13 chrUextra 14432551 14433263 -14571393 - SAR_DM Satellite Satellite -569 903 195 9 695 6173 1 0 0 chrUextra 14433369 14434090 -14570566 - DMRT1B LINE R1 -3364 1819 1099 9 695 709 239 107 11 chrUextra 14434383 14434654 -14570002 + BS LINE Jockey 3142 3438 -1688 9 695 793 173 72 20 chrUextra 14434713 14434908 -14569748 - DMCR1A LINE CR1 -2065 2405 2201 9 695 5861 28 0 0 chrUextra 14435832 14436553 -14568103 - R1_DM LINE R1 -2522 2834 2114 9 695 5970 18 0 1 chrUextra 14436653 14437374 -14567282 - DOC2_DM LINE Jockey -169 4624 3905 9 695 2927 201 15 20 chrUextra 14437474 14438193 -14566463 - SAR_DM Satellite Satellite -626 714 1 9 695 1874 178 92 36 chrUextra 14438295 14439014 -14565642 + HETA LINE telomeric 4928 5394 -687 9 695 662 200 6 19 chrUextra 14439242 14439400 -14565256 - HETRP_DM Satellite Satellite -188 1684 1529 9 695 491 208 8 16 chrUextra 14439563 14439685 -14564971 - HETRP_DM Satellite Satellite -203 1669 1549 9 695 192 40 0 0 chrUextra 14439685 14439710 -14564946 + (TC)n Simple_repeat Simple_repeat 2 26 0 9 695 5853 26 4 0 chrUextra 14439937 14440658 -14563998 - FW_DM LINE Jockey -990 3702 2979 9 695 5009 0 2 0 chrUextra 14440758 14441339 -14563317 - BARI_DM DNA Tc1 -1143 585 4 9 695 1204 0 0 0 chrUextra 14441339 14441479 -14563177 - BARI_DM DNA Tc1 -1 1727 1588 9 695 423 87 0 0 chrUextra 14441581 14441650 -14563006 + (CATGT)n Simple_repeat Simple_repeat 3 71 0 9 695 1092 89 0 0 chrUextra 14441658 14441838 -14562818 + (TCTTG)n Simple_repeat Simple_repeat 1 180 0 9 695 1585 97 8 46 chrUextra 14441857 14442300 -14562356 - Gypsy12_I LTR Gypsy -4688 858 375 9 695 6044 6 1 1 chrUextra 14442400 14443121 -14561535 + MDG3_I LTR Gypsy 2897 3617 -1369 9 695 5898 25 0 0 chrUextra 14443221 14443942 -14560714 - R1_DM LINE R1 -2193 3163 2443 9 695 40 21 0 0 chrUextra 14444232 14444279 -14560377 + AT_rich Low_complexity Low_complexity 1 47 0 9 695 652 104 0 0 chrUextra 14444295 14444391 -14560265 + ACCORD2_I LTR Gypsy 1272 1367 -5845 9 695 1259 105 101 42 chrUextra 14444475 14444763 -14559893 + ACCORD2_I LTR Gypsy 1505 1809 -5403 9 695 3046 246 0 0 chrUextra 14444863 14445584 -14559072 - Gypsy6_I LTR Gypsy -3250 3762 3042 9 695 4761 4 0 0 chrUextra 14445684 14446228 -14558428 - R2_DM LINE R2 -10 3597 3054 9 695 1519 0 0 0 chrUextra 14446232 14446405 -14558251 - LSU-rRNA_Dme rRNA rRNA -1319 2581 2409 9 695 6249 1 0 0 chrUextra 14446505 14447226 -14557430 - DMRT1B LINE R1 -941 4242 3522 9 695 4516 39 18 72 chrUextra 14447326 14448047 -14556609 + BATUMI_I LTR Pao 763 1444 -6519 9 695 212 156 76 25 chrUextra 14448972 14449051 -14555605 + (CATATA)n Simple_repeat Simple_repeat 3 85 0 9 695 3339 56 33 73 chrUextra 14449055 14449689 -14554967 + BATUMI_I LTR Pao 593 1201 -6762 9 695 345 292 0 0 chrUextra 14450325 14450431 -14554225 + Copia2_I LTR Copia 567 672 -3490 9 695 5419 42 42 15 chrUextra 14450610 14451331 -14553325 + DMCR1A LINE CR1 918 1657 -2813 9 695 5507 36 4 10 chrUextra 14451431 14452152 -14552504 + BATUMI_I LTR Pao 3151 3867 -4096 9 695 2003 160 87 0 chrUextra 14452263 14452644 -14552012 - DMRT1B LINE R1 -802 4381 3968 9 695 2332 44 0 15 chrUextra 14452647 14452973 -14551683 + TRANSIB2 DNA Transib 10 330 -2514 9 695 2819 179 37 12 chrUextra 14453076 14453759 -14550897 - SAR_DM Satellite Satellite -581 891 192 9 695 803 107 0 0 chrUextra 14453663 14453794 -14550862 + ARS406_DM Unknown Unknown 1 131 -222 9 695 869 226 237 11 chrUextra 14453898 14454248 -14550408 - BS LINE Jockey -2677 2449 2021 9 695 963 124 0 34 chrUextra 14454409 14454584 -14550072 + DIVER_LTR LTR Pao 1 169 -55 9 695 1461 41 31 0 chrUextra 14454715 14454910 -14549746 - BLOOD_I LTR Gypsy -6412 201 1 9 695 1884 39 8 45 chrUextra 14455027 14455293 -14549363 - BLOOD_LTR LTR Gypsy -143 256 1 9 695 1113 35 28 0 chrUextra 14455293 14455436 -14549220 + R1_DM LINE R1 3260 3406 -1950 9 695 1642 23 13 18 chrUextra 14455539 14455764 -14548892 - NTS_DM Other Other -16 224 1 9 695 1438 15 20 20 chrUextra 14455764 14455967 -14548689 - NTS_DM Other Other 0 240 38 9 695 832 9 9 27 chrUextra 14455967 14456078 -14548578 - NTS_DM Other Other -107 133 25 9 695 21 57 0 0 chrUextra 14456104 14456139 -14548517 + AT_rich Low_complexity Low_complexity 1 35 0 9 695 737 36 0 9 chrUextra 14456139 14456251 -14548405 - NTS_DM Other Other -39 201 91 9 695 845 294 72 40 chrUextra 14456459 14457055 -14547601 + Copia2_I LTR Copia 973 1587 -2575 9 695 488 119 36 0 chrUextra 14457198 14457282 -14547374 - NTS_DM Other Other -150 90 4 9 695 1290 6 0 18 chrUextra 14457393 14457558 -14547098 - NTS_DM Other Other -78 162 1 9 695 1831 8 17 13 chrUextra 14457558 14457797 -14546859 - NTS_DM Other Other 0 240 1 9 695 682 0 39 29 chrUextra 14457797 14457899 -14546757 - NTS_DM Other Other 0 240 138 9 695 640 139 47 0 chrUextra 14458007 14458136 -14546520 - FB4_DM DNA Tc1 -3322 767 633 9 695 813 56 149 82 chrUextra 14458039 14458233 -14546423 + FB4_DM DNA Tc1 3847 4053 -36 9 695 26 64 0 0 chrUextra 14458613 14458660 -14545996 + AT_rich Low_complexity Low_complexity 1 47 0 9 695 277 133 0 22 chrUextra 14458671 14458717 -14545939 - DNAREP1_DM LINE Penelope -110 484 440 9 695 383 260 82 39 chrUextra 14458915 14459147 -14545509 + Copia_I LTR Copia 3486 3727 -866 9 695 661 260 107 42 chrUextra 14459158 14459540 -14545116 + Copia_I LTR Copia 3819 4225 -368 9 695 942 107 0 128 chrUextra 14459641 14459844 -14544812 - R1_DM LINE R1 -4606 750 574 9 695 982 102 29 29 chrUextra 14459845 14460017 -14544639 - R1_DM LINE R1 -5184 172 1 9 695 1989 57 3 35 chrUextra 14460035 14460324 -14544332 + Gypsy6A_LTR LTR Gypsy 71 350 -70 9 695 5425 31 20 11 chrUextra 14460470 14461179 -14543477 + BATUMI_I LTR Pao 1395 2109 -5854 9 695 6190 0 0 0 chrUextra 14461283 14462004 -14542652 + DOC LINE Jockey 442 1162 -3563 9 695 5683 7 15 1 chrUextra 14462104 14462825 -14541831 - QUASIMODO_I LTR Gypsy -583 5477 4747 9 695 198 0 0 0 chrUextra 14462939 14462961 -14541695 + (CA)n Simple_repeat Simple_repeat 1 22 0 9 695 5648 32 14 0 chrUextra 14463746 14464467 -14540189 + IDEFIX_I LTR Gypsy 1453 2183 -3445 9 695 3337 2 0 8 chrUextra 14464567 14464966 -14539690 + Gypsy4_I LTR Gypsy 4932 5327 -961 9 695 2339 7 0 0 chrUextra 14465009 14465288 -14539368 + Gypsy4_I LTR Gypsy 5316 5594 -694 9 695 2031 169 8 7 chrUextra 14465389 14466109 -14538547 - SAR_DM Satellite Satellite -610 720 1 9 695 5867 21 1 1 chrUextra 14466209 14466930 -14537726 - NINJA_I LTR Pao -449 5562 4842 9 695 5229 56 1 4 chrUextra 14467030 14467751 -14536905 - STALKER4_I LTR Gypsy -1130 5400 4682 9 695 3188 170 10 9 chrUextra 14467851 14468546 -14536110 + SAR_DM Satellite Satellite 381 1076 -396 9 695 1069 0 0 0 chrUextra 14469269 14469391 -14535265 - SSU-rRNA_Dme rRNA rRNA 0 1995 1874 9 695 3257 170 8 8 chrUextra 14469496 14470206 -14534450 + SAR_DM Satellite Satellite 352 1061 -411 9 695 32 0 0 0 chrUextra 14470464 14470496 -14534160 + AT_rich Low_complexity Low_complexity 1 32 0 9 695 3520 5 0 0 chrUextra 14470628 14471031 -14533625 + SSU-rRNA_Dme rRNA rRNA 1 403 -1592 9 695 881 43 0 0 chrUextra 14471134 14471250 -14533406 - BATUMI_I LTR Pao -1421 6542 6427 9 695 4117 64 16 2 chrUextra 14471273 14471851 -14532805 + BATUMI_I LTR Pao 7303 7888 -75 9 695 2932 9 0 0 chrUextra 14471951 14472288 -14532368 - Invader1_I LTR Gypsy -2849 337 1 9 695 3285 8 3 0 chrUextra 14472288 14472671 -14531985 - Invader1_LTR LTR Gypsy 0 423 40 9 695 746 96 9 0 chrUextra 14472774 14472889 -14531767 - DNAREP1_DM LINE Penelope -478 116 1 9 695 5954 25 0 0 chrUextra 14473591 14474311 -14530345 - R1_DM LINE R1 -585 4771 4052 9 695 366 39 39 0 chrUextra 14474411 14474462 -14530194 - NTS_DM Other Other -187 53 1 9 695 1408 20 20 20 chrUextra 14474462 14474665 -14529991 - NTS_DM Other Other 0 240 38 9 695 817 0 0 0 chrUextra 14474665 14474761 -14529895 - NTS_DM Other Other -107 133 38 9 695 832 9 9 27 chrUextra 14474761 14474872 -14529784 - NTS_DM Other Other -107 133 25 9 695 21 57 0 0 chrUextra 14474898 14474933 -14529723 + AT_rich Low_complexity Low_complexity 1 35 0 9 695 1252 18 0 6 chrUextra 14474933 14475098 -14529558 - NTS_DM Other Other -39 201 38 9 695 4463 23 7 10 chrUextra 14475231 14475808 -14528848 - BATUMI_I LTR Pao -962 7001 6427 9 695 881 33 0 0 chrUextra 14475831 14475951 -14528705 + BATUMI_I LTR Pao 7303 7422 -541 9 695 6021 1 0 1 chrUextra 14476051 14476771 -14527885 - ROO_I LTR Pao -4613 3643 2925 9 695 935 292 28 28 chrUextra 14477060 14477533 -14527123 + Copia2_I LTR Copia 1386 1920 -2242 9 695 1496 0 0 0 chrUextra 14477691 14477861 -14526795 + LSU-rRNA_Dme rRNA rRNA 3731 3900 0 9 695 27 29 0 0 chrUextra 14477933 14477967 -14526689 + AT_rich Low_complexity Low_complexity 1 34 0 9 695 22 56 0 0 chrUextra 14478031 14478067 -14526589 + AT_rich Low_complexity Low_complexity 1 36 0 9 695 27 29 0 0 chrUextra 14478131 14478165 -14526491 + AT_rich Low_complexity Low_complexity 1 34 0 9 695 246 150 0 0 chrUextra 14478170 14478210 -14526446 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 695 246 150 0 0 chrUextra 14478361 14478401 -14526255 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 695 2125 85 0 10 chrUextra 14478511 14478809 -14525847 + Gypsy12_I LTR Gypsy 5252 5546 0 9 695 1715 201 17 20 chrUextra 14478822 14479227 -14525429 + Gypsy12_LTR LTR Gypsy 13 416 -1920 9 695 3074 177 18 8 chrUextra 14480151 14480868 -14523788 - SAR_DM Satellite Satellite -397 1075 352 9 695 6155 4 0 0 chrUextra 14480971 14481691 -14522965 - STALKER4_I LTR Gypsy -2378 4152 3433 9 695 3152 168 19 7 chrUextra 14481803 14482503 -14522153 - SAR_DM Satellite Satellite -396 1076 369 9 695 5927 6 0 0 chrUextra 14482637 14483331 -14521325 - DMRT1B LINE R1 -114 5069 4376 9 695 2444 260 46 4 chrUextra 14483431 14484146 -14520510 + Gypsy6_I LTR Gypsy 4090 4834 -2178 9 695 5144 63 18 3 chrUextra 14484251 14484971 -14519685 + QUASIMODO_I LTR Gypsy 150 880 -5180 9 695 1314 0 27 16 chrUextra 14485071 14485255 -14519401 + NTS_DM Other Other 55 240 0 9 695 1301 6 0 18 chrUextra 14485255 14485420 -14519236 + NTS_DM Other Other 1 162 -78 9 695 488 119 36 0 chrUextra 14485530 14485614 -14519042 + NTS_DM Other Other 4 90 -150 9 695 2597 187 71 12 chrUextra 14485891 14486611 -14518045 + SAR_DM Satellite Satellite 256 1017 -455 9 695 1872 287 8 8 chrUextra 14486770 14487431 -14517225 - FROGGER_I LTR Copia -311 1766 1106 9 695 229 108 0 0 chrUextra 14487669 14487706 -14516950 - DNAREP1_DM LINE Penelope -2 592 556 9 695 740 143 66 44 chrUextra 14487699 14487882 -14516774 - DNAREP1_DM LINE Penelope -401 193 7 9 695 25 0 0 0 chrUextra 14487928 14487953 -14516703 + AT_rich Low_complexity Low_complexity 1 25 0 9 695 313 88 263 0 chrUextra 14488000 14488057 -14516599 - DNAREP1_DM LINE Penelope -519 75 4 9 695 966 8 83 0 chrUextra 14488126 14488246 -14516410 - PROTOP_A DNA P 0 1105 976 9 695 445 195 0 17 chrUextra 14488351 14488466 -14516190 + XDMR_DM Unknown Unknown 248 360 0 9 695 2691 196 6 20 chrUextra 14488380 14489071 -14515585 - SAR_DM Satellite Satellite -354 1118 438 9 695 420 68 0 0 chrUextra 14489580 14489639 -14515017 + BARI1 DNA Tc1 37 95 -1655 9 695 1166 113 44 84 chrUextra 14489641 14489891 -14514765 - Gypsy12A_LTR LTR Gypsy -1605 675 436 9 695 1362 6 0 6 chrUextra 14489991 14490160 -14514496 - NTS_DM Other Other -72 168 1 9 695 1070 20 245 20 chrUextra 14490160 14490356 -14514300 - NTS_DM Other Other 0 240 1 9 695 1679 25 21 17 chrUextra 14490356 14490595 -14514061 - NTS_DM Other Other 0 240 1 9 695 674 27 35 35 chrUextra 14490595 14490711 -14513945 - NTS_DM Other Other 0 240 125 9 695 2628 73 145 3 chrUextra 14490823 14491530 -14513126 + TART_B1 LINE telomeric 2399 3206 -7448 9 695 6043 7 15 0 chrUextra 14492451 14493171 -14511485 + DOC2_DM LINE Jockey 2012 2742 -2051 9 695 21 95 0 0 chrUextra 14493375 14493438 -14511218 + AT_rich Low_complexity Low_complexity 1 63 0 9 695 4232 2 2 46 chrUextra 14493450 14493991 -14510665 + LSU-rRNA_Dme rRNA rRNA 1 517 -3383 9 695 6225 0 1 3 chrUextra 14494092 14494811 -14509845 + SSU-rRNA_Dme rRNA rRNA 1184 1901 -94 9 695 845 10 0 0 chrUextra 14495531 14495631 -14509025 - SSU-rRNA_Dme rRNA rRNA 0 1995 1896 9 695 1892 9 0 0 chrUextra 14495731 14495953 -14508703 - LSU-rRNA_Dme rRNA rRNA -3678 222 1 9 695 21 95 0 0 chrUextra 14495965 14496028 -14508628 + AT_rich Low_complexity Low_complexity 1 63 0 9 695 34 24 0 0 chrUextra 14496241 14496282 -14508374 + AT_rich Low_complexity Low_complexity 1 41 0 9 695 6239 4 1 0 chrUextra 14497371 14498091 -14506565 - R2_DM LINE R2 -827 2780 2060 9 695 6081 4 1 1 chrUextra 14498191 14498911 -14505745 + R1_DM LINE R1 3527 4246 -1110 9 695 5103 19 2 0 chrUextra 14499011 14499626 -14505030 + R1_DM LINE R1 4741 5356 0 9 695 461 75 15 0 chrUextra 14499659 14499726 -14504930 + R1_DM LINE R1 1 68 -5288 9 695 1418 6 6 0 chrUextra 14499831 14500000 -14504656 - R1_DM LINE R1 -352 5004 4835 9 695 4716 29 2 7 chrUextra 14500000 14500551 -14504105 - R1_DM LINE R1 -522 4834 4287 9 695 605 144 0 0 chrUextra 14500651 14500748 -14503908 - NTS_DM Other Other -136 104 8 9 695 281 146 21 0 chrUextra 14500846 14500894 -14503762 - NTS_DM Other Other -191 49 1 9 695 1094 144 20 5 chrUextra 14500925 14501127 -14503529 - NTS_DM Other Other -35 205 1 9 695 242 183 45 68 chrUextra 14501127 14501215 -14503441 - NTS_DM Other Other 0 240 155 9 695 342 150 67 48 chrUextra 14501266 14501371 -14503285 - NTS_DM Other Other 0 240 134 9 695 6695 1 0 1 chrUextra 14501471 14502191 -14502465 - LSU-rRNA_Dme rRNA rRNA -439 3461 2743 9 695 3081 191 15 7 chrUextra 14502291 14502976 -14501680 - SAR_DM Satellite Satellite -603 869 180 9 695 966 99 0 0 chrUextra 14502870 14503011 -14501645 + ARS406_DM Unknown Unknown 1 141 -212 9 695 6188 1 0 0 chrUextra 14503111 14503772 -14500884 + R2_DM LINE R2 2945 3605 -2 9 695 502 35 0 0 chrUextra 14503774 14503831 -14500825 + LSU-rRNA_Dme rRNA rRNA 2578 2634 -1266 9 695 3061 196 18 26 chrUextra 14503935 14504647 -14500009 + SAR_DM Satellite Satellite 1 706 -225 9 695 6589 3 0 0 chrUextra 14504751 14505471 -14499185 - IVK_DM LINE I -2217 3185 2466 9 695 21 89 0 0 chrUextra 14506000 14506056 -14498600 + AT_rich Low_complexity Low_complexity 1 56 0 9 695 1989 0 0 5 chrUextra 14506075 14506291 -14498365 - SSU-rRNA_Dme rRNA rRNA 0 1995 1781 9 695 1619 5 5 0 chrUextra 14506391 14506580 -14498076 + ROO_I LTR Pao 8067 8256 0 9 695 4022 0 0 0 chrUextra 14506580 14507008 -14497648 + ROO_LTR LTR Pao 1 428 0 9 695 6570 0 0 0 chrUextra 14507211 14507931 -14496725 - R1_DM LINE R1 -3441 1915 1196 9 695 6525 1 0 1 chrUextra 14508031 14508751 -14495905 - ROO_I LTR Pao -5119 3137 2419 9 695 533 141 24 0 chrUextra 14508917 14509002 -14495654 + NTS_DM Other Other 4 90 -150 9 695 28 48 0 0 chrUextra 14509275 14509317 -14495339 + AT_rich Low_complexity Low_complexity 1 42 0 9 695 2189 29 0 4 chrUextra 14509671 14509946 -14494710 - BATUMI_I LTR Pao -387 7576 7303 9 695 3361 26 9 12 chrUextra 14509969 14510391 -14494265 + BATUMI_I LTR Pao 6427 6847 -1116 9 695 6001 21 29 7 chrUextra 14510491 14511211 -14493445 + FW_DM LINE Jockey 3818 4553 -139 9 695 3389 183 10 6 chrUextra 14511321 14512029 -14492627 - SAR_DM Satellite Satellite -535 937 227 9 695 5292 11 0 48 chrUextra 14512131 14512552 -14492104 - DM176_I LTR Gypsy -5484 936 537 9 695 208 28 26 53 chrUextra 14512552 14512590 -14492066 + (TTA)n Simple_repeat Simple_repeat 3 39 0 9 695 5292 11 0 48 chrUextra 14512590 14512851 -14491805 - DM176_I LTR Gypsy -5884 536 287 9 695 3997 36 14 7 chrUextra 14512951 14513671 -14490985 - Transib5 DNA Transib -1049 1952 1187 9 695 2744 175 99 42 chrUextra 14513771 14514491 -14490165 - TAHRE LINE telomeric -2561 7902 7142 9 695 6641 3 0 3 chrUextra 14515413 14516131 -14488525 + SSU-rRNA_Dme rRNA rRNA 90 805 -1190 9 695 394 204 0 19 chrUextra 14516237 14516342 -14488314 + XDMR_DM Unknown Unknown 258 360 0 9 695 3213 181 13 20 chrUextra 14516256 14516951 -14487705 - SAR_DM Satellite Satellite -354 1118 429 9 695 6513 0 1 0 chrUextra 14517051 14517771 -14486885 + FW_DM LINE Jockey 2713 3433 -1259 9 695 5043 70 109 0 chrUextra 14517871 14518571 -14486085 + TART LINE telomeric 1084 1859 -12618 9 695 6233 26 3 0 chrUextra 14518691 14519411 -14485245 - R1_DM LINE R1 -3145 2211 1490 9 695 6562 0 1 6 chrUextra 14519511 14520231 -14484425 + SSU-rRNA_Dme rRNA rRNA 551 1267 -728 9 695 3055 206 4 10 chrUextra 14520332 14521051 -14483605 - SAR_DM Satellite Satellite -563 909 195 9 695 6120 15 3 4 chrUextra 14521151 14521871 -14482785 - PROTOP_A DNA P -296 809 91 9 695 6393 0 3 3 chrUextra 14521971 14522691 -14481965 - R1_DM LINE R1 -3831 1525 806 9 695 6500 3 0 0 chrUextra 14522796 14523511 -14481145 - LSU-rRNA_Dme rRNA rRNA -2860 1040 326 9 695 6507 1 19 0 chrUextra 14523611 14524331 -14480325 + ROO_I LTR Pao 5552 6285 -1971 9 695 6412 6 3 7 chrUextra 14524431 14525151 -14479505 + DM412 LTR Gypsy 103 819 -6078 9 695 3420 178 7 10 chrUextra 14525259 14525970 -14478686 - SAR_DM Satellite Satellite -569 903 195 9 695 386 301 16 27 chrUextra 14526072 14526260 -14478396 - Gypsy7_I LTR Gypsy -3633 1351 1166 9 695 3523 44 0 5 chrUextra 14526359 14526791 -14477865 - PROTOP_A DNA P 0 1105 676 9 695 2093 8 4 0 chrUextra 14527364 14527603 -14477053 - ALUII_DM Unknown Unknown 0 240 1 9 695 5505 38 5 0 chrUextra 14527711 14528363 -14476293 + DIVER2_I LTR Pao 509 1163 -2984 9 695 6182 26 15 0 chrUextra 14528531 14529251 -14475405 - R1_DM LINE R1 -3119 2237 1507 9 695 3624 176 7 7 chrUextra 14529353 14530069 -14474587 + SAR_DM Satellite Satellite 346 1061 -411 9 695 6390 15 8 0 chrUextra 14530171 14530891 -14473765 + Invader3_I LTR Gypsy 1995 2720 -2168 9 695 21 89 0 0 chrUextra 14531163 14531219 -14473437 + AT_rich Low_complexity Low_complexity 1 56 0 9 695 3392 180 12 11 chrUextra 14531811 14532531 -14472125 + SAR_DM Satellite Satellite 263 983 -489 9 695 6530 7 1 0 chrUextra 14532631 14533351 -14471305 + R1_DM LINE R1 4208 4928 -428 9 695 2533 102 19 53 chrUextra 14533452 14534152 -14470504 - DMSAT6 Satellite Satellite -28 675 1 9 695 6537 0 0 0 chrUextra 14534271 14534991 -14469665 + BLOOD_I LTR Gypsy 4522 5241 -1372 9 695 6501 19 0 0 chrUextra 14535091 14535811 -14468845 + BATUMI_I LTR Pao 3601 4320 -3643 9 695 6390 3 0 0 chrUextra 14535925 14536631 -14468025 + LSU-rRNA_Dme rRNA rRNA 218 923 -2977 9 695 6593 1 1 1 chrUextra 14536731 14537451 -14467205 + DOC LINE Jockey 3826 4545 -180 9 695 2109 210 86 103 chrUextra 14537561 14538271 -14466385 + Gypsy3_I LTR Gypsy 73 770 -5407 9 695 3133 183 39 11 chrUextra 14538371 14539088 -14465568 - SAR_DM Satellite Satellite -544 928 192 9 695 6428 18 0 0 chrUextra 14539191 14539911 -14464745 - R1_DM LINE R1 -585 4771 4052 9 695 6087 36 1 1 chrUextra 14540011 14540731 -14463925 - R1_DM LINE R1 -3833 1523 804 9 695 4785 19 7 10 chrUextra 14540843 14541420 -14463236 + BATUMI_I LTR Pao 6427 7001 -962 9 695 2059 268 30 42 chrUextra 14540855 14541549 -14463107 - MAX_I LTR Pao -668 7246 6561 9 695 6045 27 1 0 chrUextra 14541672 14542371 -14462285 - FW_DM LINE Jockey -737 3955 3256 9 695 248 157 19 56 chrUextra 14542471 14542525 -14462131 + HETRP_DM Satellite Satellite 1631 1682 -190 9 695 244 208 0 19 chrUextra 14542568 14542622 -14462034 + HETRP_DM Satellite Satellite 1580 1632 -240 9 695 344 174 250 42 chrUextra 14542669 14542765 -14461891 + HETRP_DM Satellite Satellite 1519 1634 -238 9 695 860 176 12 29 chrUextra 14542813 14542983 -14461673 + HETRP_DM Satellite Satellite 1516 1682 -190 9 695 244 208 0 19 chrUextra 14543026 14543080 -14461576 + HETRP_DM Satellite Satellite 1580 1632 -240 9 695 236 159 0 83 chrUextra 14543127 14543175 -14461481 + HETRP_DM Satellite Satellite 1519 1562 -310 9 695 2057 151 27 68 chrUextra 14543291 14544010 -14460646 + HETA LINE telomeric 4 679 -5402 9 695 4325 4 0 0 chrUextra 14544111 14544582 -14460074 + ACCORD_LTR LTR Gypsy 88 558 0 9 695 2079 35 4 4 chrUextra 14544582 14544831 -14459825 + NINJA_I LTR Pao 665 913 -5098 9 695 6525 11 1 0 chrUextra 14544931 14545651 -14459005 - Gypsy6_I LTR Gypsy -223 6789 6069 9 695 6045 10 1 12 chrUextra 14545751 14546471 -14458185 - R1_DM LINE R1 -4211 1145 434 9 695 575 12 48 36 chrUextra 14546578 14546661 -14457995 + NTS_DM Other Other 157 240 0 9 695 1965 4 17 17 chrUextra 14546661 14546901 -14457755 + NTS_DM Other Other 1 240 0 9 695 2006 0 17 13 chrUextra 14546901 14547140 -14457516 + NTS_DM Other Other 1 240 0 9 695 1352 7 0 0 chrUextra 14547140 14547291 -14457365 + NTS_DM Other Other 1 151 -89 9 695 201 121 0 0 chrUextra 14547819 14547852 -14456804 + (TC)n Simple_repeat Simple_repeat 1 33 0 9 695 267 215 11 151 chrUextra 14548283 14548376 -14456280 + DM176_LTR LTR Gypsy 190 269 -238 9 695 282 191 59 0 chrUextra 14548485 14548553 -14456103 + DM176_LTR LTR Gypsy 295 366 -141 9 695 632 148 40 16 chrUextra 14548570 14548694 -14455962 + DMTOM1_LTR LTR Gypsy 284 410 0 9 695 392 103 14 29 chrUextra 14548694 14548755 -14455901 + DMTOM1_LTR LTR Gypsy 349 408 -2 9 695 1293 14 0 0 chrUextra 14548784 14548931 -14455725 - QUASIMODO_LTR LTR Gypsy 0 658 512 9 696 2789 64 75 4 chrUextra 14549031 14549751 -14454905 - IDEFIX_I LTR Gypsy -2486 3142 2372 9 696 6220 24 4 0 chrUextra 14549851 14550571 -14454085 - R1_DM LINE R1 -1885 3471 2749 9 696 2510 116 11 13 chrUextra 14550671 14551391 -14453265 - DMSAT6 Satellite Satellite -80 719 1 9 696 2443 7 0 0 chrUextra 14551507 14551783 -14452873 - Copia_LTR LTR Copia 0 276 1 9 696 366 270 48 11 chrUextra 14551817 14552006 -14452650 - MDG3_I LTR Gypsy -2407 2579 2463 9 696 5751 44 3 11 chrUextra 14552311 14553031 -14451625 + BATUMI_I LTR Pao 2938 3651 -4312 9 696 6440 19 0 0 chrUextra 14553951 14554671 -14449985 - BATUMI_I LTR Pao -2743 5220 4501 9 696 21 89 0 0 chrUextra 14555251 14555307 -14449349 + AT_rich Low_complexity Low_complexity 1 56 0 9 696 1522 6 0 0 chrUextra 14555326 14555491 -14449165 - SSU-rRNA_Dme rRNA rRNA 0 1995 1831 9 696 1790 18 13 18 chrUextra 14555593 14555818 -14448838 - NTS_DM Other Other -16 224 1 9 696 1878 21 17 17 chrUextra 14555818 14556058 -14448598 - NTS_DM Other Other 0 240 1 9 696 1526 20 20 20 chrUextra 14556058 14556261 -14448395 - NTS_DM Other Other 0 240 38 9 696 386 0 20 0 chrUextra 14556261 14556311 -14448345 - NTS_DM Other Other -107 133 83 9 696 437 69 0 0 chrUextra 14557036 14557094 -14447562 - DNAREP1_DM LINE Penelope -9 585 528 9 696 6604 3 0 0 chrUextra 14557231 14557951 -14446705 + DM176_I LTR Gypsy 2460 3179 -3241 9 696 3743 23 0 2 chrUextra 14558051 14558482 -14446174 + R1_DM LINE R1 4925 5354 -2 9 696 1874 75 8 0 chrUextra 14558517 14558771 -14445885 + R1_DM LINE R1 1 256 -5100 9 696 28 48 0 0 chrUextra 14558980 14559022 -14445634 + AT_rich Low_complexity Low_complexity 1 42 0 9 696 534 119 36 0 chrUextra 14559295 14559379 -14445277 - NTS_DM Other Other -150 90 4 9 696 714 10 10 29 chrUextra 14559489 14559591 -14445065 - NTS_DM Other Other -78 162 63 9 696 6385 3 1 1 chrUextra 14559691 14560411 -14444245 - R1_DM LINE R1 -3919 1437 718 9 696 6392 14 0 4 chrUextra 14560511 14561231 -14443425 + Gypsy2_I LTR Gypsy 5237 5953 -182 9 696 3578 163 14 11 chrUextra 14561343 14562049 -14442607 - SAR_DM Satellite Satellite -396 1076 369 9 696 3166 184 11 23 chrUextra 14562152 14562854 -14441802 + SAR_DM Satellite Satellite 425 1118 -354 9 696 418 185 0 21 chrUextra 14562777 14562871 -14441785 - XDMR_DM Unknown Unknown -9 351 260 9 696 2382 8 0 0 chrUextra 14563791 14564051 -14440605 + R1_DM LINE R1 5097 5356 0 9 696 3249 78 5 5 chrUextra 14564072 14564508 -14440148 + R1_DM LINE R1 23 458 -4898 9 696 6208 10 24 1 chrUextra 14564620 14565331 -14439325 - FW_DM LINE Jockey -1829 2863 2137 9 696 2382 192 24 14 chrUextra 14566251 14566971 -14437685 - SAR_DM Satellite Satellite -737 726 1 9 696 387 0 0 0 chrUextra 14567071 14567114 -14437542 + (TTCTC)n Simple_repeat Simple_repeat 5 47 0 9 696 3616 35 12 0 chrUextra 14567891 14568316 -14436340 + DOC3_DM LINE Jockey 1872 2301 -2439 9 696 2550 36 13 3 chrUextra 14568302 14568611 -14436045 + DOC3_DM LINE Jockey 2520 2831 -1909 9 696 4080 47 43 50 chrUextra 14568711 14569290 -14435366 - Baggins1 LINE LOA -4736 717 143 9 696 3338 183 8 11 chrUextra 14569533 14570251 -14434405 - SAR_DM Satellite Satellite -549 923 208 9 696 713 191 13 26 chrUextra 14570544 14570700 -14433956 + HETRP_DM Satellite Satellite 1529 1682 -190 9 696 729 184 13 26 chrUextra 14570853 14571009 -14433647 + HETRP_DM Satellite Satellite 1529 1682 -190 9 696 259 105 0 0 chrUextra 14571171 14571209 -14433447 - HMSBEAGLE_I LTR Gypsy -6317 212 175 9 696 376 49 65 16 chrUextra 14571231 14571293 -14433363 - HMSBEAGLE_I LTR Gypsy -6464 65 1 9 696 990 173 102 15 chrUextra 14571292 14571497 -14433159 - DMLTR5 LTR Gypsy 0 266 44 9 696 6281 4 17 0 chrUextra 14571991 14572711 -14431945 - MDG1_I LTR Gypsy -4793 1803 1072 9 696 3023 211 16 18 chrUextra 14572813 14573527 -14431129 + SAR_DM Satellite Satellite 1 712 -203 9 696 3486 179 8 8 chrUextra 14573630 14574349 -14430307 - SAR_DM Satellite Satellite -470 1002 284 9 696 3389 172 13 15 chrUextra 14575268 14575982 -14428674 - SAR_DM Satellite Satellite -515 957 246 9 696 6660 3 0 0 chrUextra 14576087 14576806 -14427850 + GTWIN_I LTR Gypsy 405 1123 -5298 9 696 3577 168 10 7 chrUextra 14576916 14577622 -14427034 - SAR_DM Satellite Satellite -396 1076 369 9 696 1293 294 29 35 chrUextra 14577728 14578239 -14426417 - FROGGER_I LTR Copia -1150 927 420 9 696 3164 182 35 14 chrUextra 14578549 14579262 -14425394 + SAR_DM Satellite Satellite 247 974 -498 9 696 6307 3 18 1 chrUextra 14579363 14580082 -14424574 + ROO_I LTR Pao 27 757 -7499 9 696 6431 6 3 8 chrUextra 14580182 14580901 -14423755 + Gypsy6_I LTR Gypsy 1929 2643 -4369 9 696 1979 241 114 38 chrUextra 14581001 14581714 -14422942 - ROVER-I_DM LTR Gypsy -4243 2341 1575 9 696 3346 177 14 12 chrUextra 14581820 14582539 -14422117 - SAR_DM Satellite Satellite -556 916 197 9 696 6031 1 0 3 chrUextra 14582707 14583358 -14421298 + SSU-rRNA_Dme rRNA rRNA 1 649 -1346 9 696 6445 13 0 4 chrUextra 14583458 14584175 -14420481 + Gypsy2_I LTR Gypsy 1749 2462 -3673 9 696 6596 3 0 0 chrUextra 14584277 14584996 -14419660 - DMRT1B LINE R1 -1078 4105 3387 9 696 6337 7 0 0 chrUextra 14585097 14585815 -14418841 + QUASIMODO_I LTR Gypsy 1004 1721 -4339 9 696 4051 39 0 2 chrUextra 14585915 14586403 -14418253 + TRANSIB2 DNA Transib 180 666 -2178 9 696 1942 21 0 0 chrUextra 14586395 14586634 -14418022 + Invader2_I LTR Gypsy 196 434 -4158 9 696 6255 8 1 1 chrUextra 14586734 14587453 -14417203 + QUASIMODO_I LTR Gypsy 3906 4624 -1436 9 696 936 9 0 27 chrUextra 14587562 14587674 -14416982 - NTS_DM Other Other -107 133 25 9 696 22 56 0 0 chrUextra 14587700 14587736 -14416920 + AT_rich Low_complexity Low_complexity 1 36 0 9 696 278 176 0 19 chrUextra 14587749 14587801 -14416855 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 696 268 196 0 19 chrUextra 14587832 14587884 -14416772 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 696 268 196 0 19 chrUextra 14587924 14587976 -14416680 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 696 268 196 0 19 chrUextra 14588016 14588068 -14416588 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 696 268 196 0 19 chrUextra 14588108 14588160 -14416496 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 696 27 0 0 0 chrUextra 14588162 14588189 -14416467 + AT_rich Low_complexity Low_complexity 1 27 0 9 696 6282 21 1 1 chrUextra 14588372 14589091 -14415565 - R1_DM LINE R1 -35 5321 4603 9 696 3621 216 23 37 chrUextra 14590010 14591544 -14413112 - SAR_DM Satellite Satellite -884 1513 1 9 696 2780 90 43 22 chrUextra 14591648 14592367 -14412289 + DMSAT6 Satellite Satellite 1 733 -125 9 696 6005 35 22 0 chrUextra 14592467 14593186 -14411470 - R1_DM LINE R1 -1911 3445 2711 9 696 4509 2 0 2 chrUextra 14593286 14593775 -14410881 + LSU-rRNA_Dme rRNA rRNA 2145 2632 -1268 9 696 2079 0 9 0 chrUextra 14593775 14594005 -14410651 + R1_DM LINE R1 1 232 -5124 9 696 3570 45 69 1 chrUextra 14594109 14594824 -14409832 - PROTOP DNA P -252 853 224 9 696 2452 4 0 0 chrUextra 14595219 14595486 -14409170 - MDG3_LTR LTR Gypsy 0 267 1 9 696 1366 13 0 0 chrUextra 14595486 14595643 -14409013 - MDG3_I LTR Gypsy 0 4986 4830 9 696 5577 59 18 4 chrUextra 14595743 14596462 -14408194 + IDEFIX_I LTR Gypsy 2365 3093 -2535 9 696 3143 237 45 42 chrUextra 14596562 14598099 -14406557 + SAR_DM Satellite Satellite 1 1541 -396 9 696 3435 0 0 0 chrUextra 14598200 14598572 -14406084 + R1_DM LINE R1 4985 5356 0 9 696 3242 3 0 0 chrUextra 14598570 14598919 -14405737 + LSU-rRNA_Dme rRNA rRNA 2640 2988 -912 9 696 2540 103 21 10 chrUextra 14599020 14599733 -14404923 + DMSAT6 Satellite Satellite 1 721 -66 9 696 4555 28 20 2 chrUextra 14599838 14600383 -14404273 + R1_DM LINE R1 4512 5066 -290 9 696 1004 35 0 0 chrUextra 14600380 14600494 -14404162 + R1_DM LINE R1 5243 5356 0 9 696 257 0 0 0 chrUextra 14600527 14600557 -14404099 + R1_DM LINE R1 1 30 -5326 9 696 463 0 19 0 chrUextra 14600657 14600711 -14403945 + SSU-rRNA_Dme rRNA rRNA 1941 1995 0 9 696 21 89 0 0 chrUextra 14600730 14600786 -14403870 + AT_rich Low_complexity Low_complexity 1 56 0 9 696 1556 6 0 0 chrUextra 14601476 14601644 -14403012 + NOMAD_LTR LTR Gypsy 351 518 0 9 696 4980 2 0 4 chrUextra 14601644 14602195 -14402461 - ROO_I LTR Pao -3543 4713 4165 9 696 21 89 0 0 chrUextra 14602680 14602736 -14401920 + AT_rich Low_complexity Low_complexity 1 56 0 9 696 6306 24 0 0 chrUextra 14603115 14603833 -14400823 - R1_DM LINE R1 -2936 2420 1703 9 696 1084 209 4 4 chrUextra 14604756 14604996 -14399660 - Stalker2_I LTR Gypsy -6872 530 291 9 696 28 48 0 0 chrUextra 14605003 14605045 -14399611 + AT_rich Low_complexity Low_complexity 1 42 0 9 696 2483 65 5 19 chrUextra 14605129 14605471 -14399185 - STALKER4_LTR LTR Gypsy -3 399 72 9 696 6369 1 3 1 chrUextra 14605571 14606290 -14398366 - R1_DM LINE R1 -4002 1354 635 9 696 1705 11 0 0 chrUextra 14606391 14606577 -14398079 + CIRCE LINE Composite 785 970 -5386 9 696 2454 59 0 75 chrUextra 14606719 14607065 -14397591 + CIRCE LINE Composite 973 1292 -5064 9 696 271 232 0 0 chrUextra 14607040 14607096 -14397560 + DM176_I LTR Gypsy 2641 2696 -3724 9 696 975 271 58 44 chrUextra 14607211 14607758 -14396898 + SAR_DM Satellite Satellite 278 832 -640 9 696 367 298 60 38 chrUextra 14607609 14607926 -14396730 - XDMR_DM Unknown Unknown -1 359 36 9 696 4235 2 0 0 chrUextra 14608847 14609341 -14395315 + STALKER4_I LTR Gypsy 6037 6530 0 9 696 2080 0 0 0 chrUextra 14609341 14609566 -14395090 + STALKER4_LTR LTR Gypsy 1 225 -177 9 696 1856 38 8 4 chrUextra 14609666 14609905 -14394751 + NTS_DM Other Other 1 240 0 9 696 1899 17 17 17 chrUextra 14609905 14610145 -14394511 + NTS_DM Other Other 1 240 0 9 696 1899 17 17 17 chrUextra 14610145 14610385 -14394271 + NTS_DM Other Other 1 240 0 9 696 6200 26 1 3 chrUextra 14610485 14611204 -14393452 - R1_DM LINE R1 -93 5263 4546 9 696 6496 6 1 0 chrUextra 14611304 14612023 -14392633 + R1_DM LINE R1 2066 2785 -2571 9 696 5981 4 1 4 chrUextra 14612123 14612842 -14391814 + G6_DM LINE Jockey 99 815 -1227 9 696 6164 7 0 0 chrUextra 14612942 14613661 -14390995 + DMRT1B LINE R1 1478 2196 -2987 9 696 6154 1 1 1 chrUextra 14613761 14614480 -14390176 + G_DM LINE Jockey 1290 2008 -2338 9 696 6111 0 1 1 chrUextra 14614580 14615299 -14389357 + TABOR_I LTR Gypsy 60 778 -5558 9 696 2449 30 383 0 chrUextra 14615399 14615872 -14388784 + MDG1_I LTR Gypsy 5943 6596 0 9 696 339 105 0 0 chrUextra 14615888 14615945 -14388711 + (TAA)n Simple_repeat Simple_repeat 3 59 0 9 696 1097 77 135 0 chrUextra 14615947 14616117 -14388539 + MDG1_LTR LTR Gypsy 94 286 -156 9 696 6041 25 0 0 chrUextra 14616218 14616937 -14387719 + DIVER_I LTR Pao 4778 5496 -147 9 696 2838 199 14 31 chrUextra 14617037 14617756 -14386900 - SAR_DM Satellite Satellite -1052 707 1 9 696 3101 189 7 7 chrUextra 14617856 14618575 -14386081 + SAR_DM Satellite Satellite 205 923 -549 9 696 6192 3 0 0 chrUextra 14618675 14619394 -14385262 + FW_DM LINE Jockey 748 1466 -3226 9 696 693 103 241 0 chrUextra 14619882 14620027 -14384629 + FB4_DM DNA Tc1 3 182 -3907 9 696 250 33 0 0 chrUextra 14620035 14620065 -14384591 - Baggins1 LINE LOA -697 4756 4727 9 696 697 61 20 0 chrUextra 14620313 14620411 -14384245 + DIVER2_I LTR Pao 2141 2240 -1907 9 696 5111 26 2 0 chrUextra 14620415 14621032 -14383624 + DIVER2_I LTR Pao 2598 3215 -932 9 696 1158 122 0 0 chrUextra 14621139 14621319 -14383337 + (TA)n Simple_repeat Simple_repeat 1 180 0 9 696 4319 4 0 0 chrUextra 14621320 14621827 -14382829 + DM176_LTR LTR Gypsy 1 507 0 9 696 1795 252 5 11 chrUextra 14622037 14622670 -14381986 - Gypsy11_I LTR Gypsy -137 3387 2759 9 696 3232 168 7 14 chrUextra 14622770 14623469 -14381187 - SAR_DM Satellite Satellite -453 1019 326 9 696 5821 31 1 3 chrUextra 14623589 14624308 -14380348 + BATUMI_I LTR Pao 4341 5058 -2905 9 696 5763 17 4 3 chrUextra 14624408 14625127 -14379529 + STALKER4_I LTR Gypsy 1858 2577 -3953 9 696 1338 18 6 6 chrUextra 14625228 14625393 -14379263 - Gypsy_LTR LTR Gypsy -317 165 1 9 696 4671 13 2 0 chrUextra 14625393 14625946 -14378710 - Gypsy_I LTR Gypsy 0 6507 5954 9 696 5909 15 1 1 chrUextra 14626046 14626765 -14377891 - R1_DM LINE R1 -902 4454 3736 9 696 1190 127 19 78 chrUextra 14626865 14627173 -14377483 - BATUMI_I LTR Pao -6925 1038 749 9 696 1170 123 92 54 chrUextra 14627214 14627584 -14377072 - BATUMI_I LTR Pao -7194 769 386 9 696 3539 192 4 0 chrUextra 14627684 14628403 -14376253 - ROVER-I_DM LTR Gypsy -2377 4207 3486 9 696 5120 27 1 1 chrUextra 14628503 14629173 -14375483 - IDEFIX_I LTR Gypsy -452 5176 4507 9 696 275 82 0 20 chrUextra 14629172 14629222 -14375434 - IDEFIX_I LTR Gypsy -1632 3996 3948 9 696 2782 174 21 18 chrUextra 14629364 14630041 -14374615 + SAR_DM Satellite Satellite 184 862 -610 9 696 6267 0 0 0 chrUextra 14630141 14630860 -14373796 - R2_DM LINE R2 -2293 1314 596 9 696 6194 0 3 3 chrUextra 14630960 14631679 -14372977 - SSU-rRNA_Dme rRNA rRNA -6 1989 1271 9 696 6183 0 1 4 chrUextra 14632598 14633317 -14371339 + SSU-rRNA_Dme rRNA rRNA 993 1709 -286 9 696 3003 170 25 14 chrUextra 14633417 14634132 -14370524 - SAR_DM Satellite Satellite -504 968 246 9 696 6197 1 1 1 chrUextra 14634240 14634955 -14369701 - SSU-rRNA_Dme rRNA rRNA -692 1303 589 9 696 2364 11 3 3 chrUextra 14635055 14635339 -14369317 + SSU-rRNA_Dme rRNA rRNA 1402 1685 -310 9 696 1316 0 0 0 chrUextra 14635324 14635479 -14369177 + DM297_LTR LTR Gypsy 260 414 0 9 696 2084 4 0 0 chrUextra 14635532 14635772 -14368884 + SSU-rRNA_Dme rRNA rRNA 1 240 -1755 9 696 3024 190 7 11 chrUextra 14635874 14636593 -14368063 + SAR_DM Satellite Satellite 278 993 -479 9 696 1213 19 0 7 chrUextra 14636695 14636850 -14367806 - NTS_DM Other Other -86 154 1 9 696 1408 20 20 20 chrUextra 14636850 14637053 -14367603 - NTS_DM Other Other 0 240 38 9 696 817 0 0 0 chrUextra 14637053 14637149 -14367507 - NTS_DM Other Other -107 133 38 9 696 832 9 9 27 chrUextra 14637149 14637260 -14367396 - NTS_DM Other Other -107 133 25 9 696 21 57 0 0 chrUextra 14637286 14637321 -14367335 + AT_rich Low_complexity Low_complexity 1 35 0 9 696 575 33 0 11 chrUextra 14637321 14637412 -14367244 - NTS_DM Other Other -39 201 112 9 696 6023 3 6 3 chrUextra 14637516 14638231 -14366425 - LSU-rRNA_Dme rRNA rRNA -2160 1740 1024 9 696 6168 0 0 0 chrUextra 14638333 14639050 -14365606 + ROO_I LTR Pao 942 1658 -6598 9 696 2776 46 11 0 chrUextra 14639496 14639869 -14364787 + PROTOP_A DNA P 74 450 -655 9 696 3895 56 28 28 chrUextra 14639969 14640539 -14364117 - R1_DM LINE R1 -4519 837 268 9 696 1120 40 7 7 chrUextra 14640538 14640688 -14363968 - R1_DM LINE R1 -1442 3914 3765 9 696 2832 9 0 39 chrUextra 14640788 14641148 -14363508 - ACCORD2_I LTR Gypsy -6866 346 1 9 696 1794 9 0 18 chrUextra 14641148 14641367 -14363289 - ACCORD2_LTR LTR Gypsy 0 215 1 9 696 1103 32 129 0 chrUextra 14641367 14641506 -14363150 - R1_DM LINE R1 -2931 2425 2267 9 696 6101 0 0 1 chrUextra 14641607 14642326 -14362330 + STALKER4_I LTR Gypsy 3243 3960 -2570 9 696 5705 35 1 0 chrUextra 14642428 14643145 -14361511 + R1_DM LINE R1 2970 3687 -1669 9 696 6169 6 0 1 chrUextra 14643245 14643964 -14360692 + STALKER4_I LTR Gypsy 3845 4562 -1968 9 696 3063 177 17 10 chrUextra 14644064 14644783 -14359873 + SAR_DM Satellite Satellite 195 918 -554 9 696 5988 0 3 0 chrUextra 14644886 14645602 -14359054 + ROO_I LTR Pao 4462 5179 -3077 9 696 2976 181 7 21 chrUextra 14645702 14646419 -14358237 + SAR_DM Satellite Satellite 412 1118 -354 9 696 6003 11 0 0 chrUextra 14646521 14647240 -14357416 - IDEFIX_I LTR Gypsy -3994 1634 916 9 696 2874 198 6 7 chrUextra 14647346 14648055 -14356601 + SAR_DM Satellite Satellite 195 902 -570 9 696 6244 0 0 0 chrUextra 14648159 14648878 -14355778 + FW_DM LINE Jockey 2937 3655 -1037 9 696 2992 183 17 10 chrUextra 14648980 14649697 -14354959 + SAR_DM Satellite Satellite 293 1014 -458 9 696 1627 0 15 0 chrUextra 14649797 14649994 -14354662 - R1_DM LINE R1 -5155 201 2 9 696 4500 4 0 0 chrUextra 14649996 14650516 -14354140 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2113 9 696 5768 32 0 0 chrUextra 14650616 14651335 -14353321 + FW_DM LINE Jockey 2926 3644 -1048 9 696 5281 76 0 11 chrUextra 14651435 14652154 -14352502 - Gypsy12_I LTR Gypsy -296 5250 4540 9 696 5868 15 0 6 chrUextra 14652254 14652973 -14351683 + DMRT1B LINE R1 3873 4587 -596 9 696 6085 6 0 0 chrUextra 14653077 14653792 -14350864 - R1_DM LINE R1 -1931 3425 2711 9 696 5950 11 3 0 chrUextra 14653892 14654611 -14350045 - QUASIMODO_I LTR Gypsy -2947 3113 2393 9 696 6052 0 11 3 chrUextra 14654711 14655428 -14349228 - MAX_I LTR Pao -6314 1600 878 9 696 1472 26 5 11 chrUextra 14655538 14655729 -14348927 - PROTOP_A DNA P -915 190 1 9 696 487 266 22 34 chrUextra 14656048 14656227 -14348429 - TV1I LTR Gypsy -5055 908 732 9 696 2968 179 8 15 chrUextra 14656353 14657068 -14347588 - SAR_DM Satellite Satellite -571 901 192 9 696 1017 8 0 8 chrUextra 14657168 14657292 -14347364 - NTS_DM Other Other -117 123 1 9 696 1756 17 17 17 chrUextra 14657292 14657532 -14347124 - NTS_DM Other Other 0 240 1 9 696 1734 21 17 17 chrUextra 14657532 14657772 -14346884 - NTS_DM Other Other 0 240 1 9 696 669 27 35 35 chrUextra 14657772 14657887 -14346769 - NTS_DM Other Other 0 240 126 9 696 374 77 0 0 chrUextra 14657987 14658039 -14346617 - CIRCE LINE Composite -5332 1024 973 9 696 3775 8 62 52 chrUextra 14658181 14658699 -14345957 - CIRCE LINE Composite -5386 970 448 9 696 1328 0 22 16 chrUextra 14658806 14658989 -14345667 + NTS_DM Other Other 57 240 0 9 696 1861 0 17 13 chrUextra 14658989 14659228 -14345428 + NTS_DM Other Other 1 240 0 9 696 1825 8 17 13 chrUextra 14659228 14659467 -14345189 + NTS_DM Other Other 1 240 0 9 696 512 0 0 0 chrUextra 14659467 14659525 -14345131 + NTS_DM Other Other 1 58 -182 9 696 5586 32 3 0 chrUextra 14659625 14660344 -14344312 - ROO_I LTR Pao -3088 5168 4448 9 696 2204 26 0 0 chrUextra 14660444 14660714 -14343942 - DM1731_LTR LTR Copia -66 270 1 9 696 3680 2 11 11 chrUextra 14660714 14661163 -14343493 - DM1731_I LTR Copia 0 3976 3528 9 696 6172 10 1 0 chrUextra 14661263 14661982 -14342674 + Gypsy6_I LTR Gypsy 6166 6885 -127 9 696 4370 53 57 21 chrUextra 14662082 14662798 -14341858 - STALKER4_I LTR Gypsy -4904 1626 885 9 696 201 121 0 0 chrUextra 14663152 14663185 -14341471 + (GA)n Simple_repeat Simple_repeat 1 33 0 9 696 5945 25 0 0 chrUextra 14663720 14664439 -14340217 - R1_DM LINE R1 -1543 3813 3095 9 696 184 30 29 29 chrUextra 14664539 14664573 -14340083 + (TA)n Simple_repeat Simple_repeat 1 34 0 9 696 21 57 0 0 chrUextra 14664573 14664608 -14340048 + AT_rich Low_complexity Low_complexity 1 35 0 9 696 338 94 0 54 chrUextra 14664610 14664712 -14339944 + MDG1_I LTR Gypsy 6551 6596 0 9 696 1533 20 0 0 chrUextra 14664716 14665062 -14339594 + (TAA)n Simple_repeat Simple_repeat 1 346 0 9 696 1036 87 148 5 chrUextra 14665062 14665258 -14339398 + MDG1_LTR LTR Gypsy 54 277 -165 9 696 3386 167 10 13 chrUextra 14666998 14667715 -14336941 + SAR_DM Satellite Satellite 342 1056 -416 9 696 5280 66 67 1 chrUextra 14667822 14668534 -14336122 + Baggins1 LINE LOA 4345 5103 -350 9 696 779 86 0 0 chrUextra 14668634 14668750 -14335906 + S_DM DNA Tc1 1621 1736 0 9 696 532 81 50 0 chrUextra 14668750 14668849 -14335807 - PROTOP_B DNA P -399 754 651 9 696 433 84 0 35 chrUextra 14668855 14668941 -14335715 + PROTOP_B DNA P 647 729 -424 9 696 755 49 266 0 chrUextra 14668953 14669144 -14335512 - PROTOP_B DNA P -518 635 394 9 696 1511 51 128 5 chrUextra 14669134 14669352 -14335304 - PROTOP_B DNA P -891 262 19 9 696 974 83 8 20 chrUextra 14669455 14670155 -14334501 - RSP Satellite Satellite -1 692 1 9 696 5971 4 36 0 chrUextra 14670272 14670991 -14333665 - Invader2_I LTR Gypsy -172 4420 3676 9 696 858 0 0 0 chrUextra 14671093 14671190 -14333466 - NTS_DM Other Other -106 134 38 9 696 847 9 0 44 chrUextra 14671190 14671304 -14333352 - NTS_DM Other Other -107 133 25 9 696 1304 18 0 6 chrUextra 14671356 14671521 -14333135 - NTS_DM Other Other -39 201 38 9 696 907 9 0 27 chrUextra 14671521 14671633 -14333023 - NTS_DM Other Other -107 133 25 9 696 22 56 0 0 chrUextra 14671659 14671695 -14332961 + AT_rich Low_complexity Low_complexity 1 36 0 9 696 269 125 0 0 chrUextra 14671708 14671748 -14332908 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 696 6227 15 0 4 chrUextra 14671910 14672629 -14332027 - MICROPIA_I LTR Gypsy -240 4236 3521 9 696 3243 177 11 21 chrUextra 14672729 14673446 -14331210 + SAR_DM Satellite Satellite 381 1090 -382 9 696 262 150 0 0 chrUextra 14673622 14673662 -14330994 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 696 269 125 0 0 chrUextra 14673705 14673745 -14330911 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 696 22 56 0 0 chrUextra 14673758 14673794 -14330862 + AT_rich Low_complexity Low_complexity 1 36 0 9 696 907 9 0 27 chrUextra 14673820 14673932 -14330724 + NTS_DM Other Other 25 133 -107 9 696 1304 18 0 6 chrUextra 14673932 14674097 -14330559 + NTS_DM Other Other 38 201 -39 9 696 886 18 0 27 chrUextra 14674149 14674261 -14330395 + NTS_DM Other Other 25 133 -107 9 696 4816 9 0 0 chrUextra 14674367 14674913 -14329743 - G2_DM LINE Jockey -261 2841 2296 9 696 861 84 0 37 chrUextra 14674950 14675086 -14329570 - G2_DM LINE Jockey -574 2528 2398 9 696 931 80 0 0 chrUextra 14675190 14675327 -14329329 + ARS406_DM Unknown Unknown 22 158 -195 9 696 2837 168 17 7 chrUextra 14675324 14675901 -14328755 - SAR_DM Satellite Satellite -558 914 332 9 696 32 0 0 0 chrUextra 14676182 14676214 -14328442 + AT_rich Low_complexity Low_complexity 1 32 0 9 696 3428 5 0 0 chrUextra 14676346 14676724 -14327932 + SSU-rRNA_Dme rRNA rRNA 1 378 -1617 9 696 6428 7 0 1 chrUextra 14676824 14677543 -14327113 - Gypsy4_I LTR Gypsy -4092 2196 1479 9 696 28 48 0 0 chrUextra 14677800 14677842 -14326814 + AT_rich Low_complexity Low_complexity 1 42 0 9 696 37 39 0 0 chrUextra 14678197 14678248 -14326408 + AT_rich Low_complexity Low_complexity 1 51 0 9 696 4501 52 33 107 chrUextra 14678462 14679180 -14325476 + Stalker2_I LTR Gypsy 3734 4398 -3004 9 696 836 0 0 0 chrUextra 14679281 14679375 -14325281 - NTS_DM Other Other -109 131 38 9 696 907 9 0 27 chrUextra 14679375 14679487 -14325169 - NTS_DM Other Other -107 133 25 9 696 1304 18 0 6 chrUextra 14679539 14679704 -14324952 - NTS_DM Other Other -39 201 38 9 696 907 9 0 27 chrUextra 14679704 14679816 -14324840 - NTS_DM Other Other -107 133 25 9 696 941 30 0 8 chrUextra 14679868 14680000 -14324656 - NTS_DM Other Other -39 201 71 9 697 3321 173 8 21 chrUextra 14680100 14680819 -14323837 + SAR_DM Satellite Satellite 381 1090 -382 9 697 5710 9 11 32 chrUextra 14680919 14681638 -14323018 - MDG1_I LTR Gypsy -5590 1006 303 9 697 23 50 0 48 chrUextra 14681818 14681881 -14322775 + AT_rich Low_complexity Low_complexity 1 60 0 9 697 27 29 0 0 chrUextra 14682405 14682439 -14322217 + AT_rich Low_complexity Low_complexity 1 34 0 9 697 6476 7 0 0 chrUextra 14682557 14683276 -14321380 + R1_DM LINE R1 4184 4902 -454 9 697 6399 0 0 0 chrUextra 14683376 14684095 -14320561 - DOC LINE Jockey -3367 1358 640 9 697 6364 6 10 3 chrUextra 14684195 14684914 -14319742 - Gypsy6_I LTR Gypsy -2416 4596 3873 9 697 3461 152 10 22 chrUextra 14685019 14685730 -14318926 - SAR_DM Satellite Satellite -425 1047 346 9 697 5944 20 3 7 chrUextra 14685833 14686552 -14318104 - CIRCE LINE Composite -1587 4769 4054 9 697 888 40 0 31 chrUextra 14686652 14686781 -14317875 + DM297_I LTR Gypsy 3878 4002 -2165 9 697 5056 8 0 0 chrUextra 14686752 14687371 -14317285 + DM297_I LTR Gypsy 5373 5991 -176 9 697 6254 1 0 0 chrUextra 14687471 14688190 -14316466 + DM176_I LTR Gypsy 1770 2488 -3932 9 697 1698 122 11 21 chrUextra 14688290 14688575 -14316081 - Gypsy12_I LTR Gypsy -5042 504 223 9 697 1177 194 166 36 chrUextra 14688569 14689008 -14315648 - Gypsy12_LTR LTR Gypsy -645 1691 1196 9 697 6374 3 1 1 chrUextra 14689109 14689828 -14314828 + LSU-rRNA_Dme rRNA rRNA 590 1308 -2592 9 697 3278 173 9 10 chrUextra 14689929 14690629 -14314027 + SAR_DM Satellite Satellite 378 1076 -396 9 697 2203 163 41 16 chrUextra 14690750 14691192 -14313464 - TART_B1 LINE telomeric -9397 1257 805 9 697 1458 144 15 33 chrUextra 14691193 14691466 -14313190 - TART LINE telomeric -7157 7320 7053 9 697 342 23 0 0 chrUextra 14691566 14691610 -14313046 + NTS_DM Other Other 158 201 -39 9 697 907 9 0 27 chrUextra 14691662 14691774 -14312882 + NTS_DM Other Other 25 133 -107 9 697 1304 18 0 6 chrUextra 14691774 14691939 -14312717 + NTS_DM Other Other 38 201 -39 9 697 889 18 0 27 chrUextra 14691991 14692103 -14312553 + NTS_DM Other Other 25 133 -107 9 697 1304 18 0 6 chrUextra 14692103 14692268 -14312388 + NTS_DM Other Other 38 201 -39 9 697 244 220 0 0 chrUextra 14692472 14692531 -14312125 + TIRANT_I LTR Gypsy 6974 7032 -660 9 697 2335 103 8 31 chrUextra 14692686 14693076 -14311580 + QUASIMODO_LTR LTR Gypsy 91 607 -51 9 697 3704 24 0 7 chrUextra 14693206 14693666 -14310990 - IDEFIX_I LTR Gypsy -2080 3548 3092 9 697 2243 29 0 0 chrUextra 14693647 14693923 -14310733 + IDEFIX_I LTR Gypsy 3726 4001 -1627 9 697 3443 3 0 0 chrUextra 14694023 14694400 -14310256 - SSU-rRNA_Dme rRNA rRNA -1618 377 1 9 697 32 0 0 0 chrUextra 14694532 14694564 -14310092 + AT_rich Low_complexity Low_complexity 1 32 0 9 697 6552 3 0 0 chrUextra 14694842 14695561 -14309095 + BS2 LINE Jockey 3458 4176 -545 9 697 2966 179 36 26 chrUextra 14695661 14696380 -14308276 - SAR_DM Satellite Satellite -314 1158 433 9 697 34 24 0 0 chrUextra 14696925 14696966 -14307690 + AT_rich Low_complexity Low_complexity 1 41 0 9 697 508 124 48 0 chrUextra 14696985 14697090 -14307566 - TART LINE telomeric -3998 10479 10370 9 697 4317 78 54 25 chrUextra 14697299 14698018 -14306638 + STALKER4_I LTR Gypsy 726 1465 -5065 9 697 3231 3 0 3 chrUextra 14698118 14698485 -14306171 - Stalker2_I LTR Gypsy -7036 366 1 9 697 3082 6 0 3 chrUextra 14698485 14698837 -14305819 - Stalker2_LTR LTR Gypsy 0 424 74 9 697 6411 6 0 7 chrUextra 14698937 14699656 -14305000 - MICROPIA_I LTR Gypsy -604 3872 3159 9 697 6356 1 1 0 chrUextra 14699756 14700475 -14304181 + STALKER4_I LTR Gypsy 4843 5562 -968 9 697 940 18 0 9 chrUextra 14700575 14700687 -14303969 + Invader1_LTR LTR Gypsy 313 423 0 9 697 5455 11 0 0 chrUextra 14700687 14701294 -14303362 + Invader1_I LTR Gypsy 1 607 -2579 9 697 6317 1 0 4 chrUextra 14701394 14702113 -14302543 - DOC LINE Jockey -2664 2061 1346 9 697 5852 31 0 0 chrUextra 14702213 14702932 -14301724 + MDG1_I LTR Gypsy 4514 5232 -1364 9 697 735 199 7 7 chrUextra 14703048 14703195 -14301461 + HETRP_DM Satellite Satellite 1529 1675 -197 9 697 713 206 7 7 chrUextra 14703357 14703504 -14301152 + HETRP_DM Satellite Satellite 1529 1675 -197 9 697 458 167 0 12 chrUextra 14703666 14703751 -14300905 + HETRP_DM Satellite Satellite 1529 1612 -260 9 697 5137 0 3 2 chrUextra 14703851 14704420 -14300236 + SSU-rRNA_Dme rRNA rRNA 1426 1995 0 9 697 5797 28 1 14 chrUextra 14704669 14705387 -14299269 - BATUMI_I LTR Pao -4538 3425 2717 9 697 4130 2 0 0 chrUextra 14705487 14705942 -14298714 + R1_DM LINE R1 4902 5356 0 9 697 2411 4 0 0 chrUextra 14705940 14706205 -14298451 + LSU-rRNA_Dme rRNA rRNA 2640 2904 -996 9 697 2702 192 42 45 chrUextra 14706305 14707023 -14297633 + TAHRE LINE telomeric 7229 7944 -2519 9 697 6523 0 1 1 chrUextra 14707123 14707841 -14296815 - LSU-rRNA_Dme rRNA rRNA -687 3213 2496 9 697 2218 12 4 0 chrUextra 14707941 14708192 -14296464 - ROO_LTR LTR Pao -176 252 1 9 697 3673 24 0 9 chrUextra 14708192 14708658 -14295998 - ROO_I LTR Pao 0 8256 7795 9 697 2969 194 15 20 chrUextra 14708763 14709473 -14295183 - SAR_DM Satellite Satellite -625 706 1 9 697 1860 88 48 68 chrUextra 14709578 14709933 -14294723 + ROVER-LTR_DM LTR Gypsy 20 367 0 9 697 1078 23 0 8 chrUextra 14709933 14710060 -14294596 + CIRCE LINE Composite 4370 4495 -1861 9 697 1386 67 44 9 chrUextra 14710060 14710286 -14294370 - S_DM DNA Tc1 0 1736 1503 9 697 5766 30 1 15 chrUextra 14710395 14711113 -14293543 + FW_DM LINE Jockey 1111 1818 -2874 9 697 3379 171 10 14 chrUextra 14711213 14711931 -14292725 + SAR_DM Satellite Satellite 304 1018 -454 9 697 27 29 0 0 chrUextra 14712062 14712096 -14292560 + AT_rich Low_complexity Low_complexity 1 34 0 9 697 23 50 0 48 chrUextra 14712620 14712683 -14291973 + AT_rich Low_complexity Low_complexity 1 60 0 9 697 5974 38 1 0 chrUextra 14714485 14715203 -14289453 + NINJA_I LTR Pao 4284 5002 -1009 9 697 2134 198 14 6 chrUextra 14715310 14716021 -14288635 - SAR_DM Satellite Satellite -1022 716 1 9 697 2969 185 26 20 chrUextra 14716121 14716837 -14287819 + SAR_DM Satellite Satellite 391 1111 -361 9 697 843 109 8 15 chrUextra 14716947 14717409 -14287247 - RSP Satellite Satellite -48 459 1 9 697 813 107 5 19 chrUextra 14717449 14717655 -14287001 - RSP Satellite Satellite -1 203 1 9 697 2620 262 1 3 chrUextra 14717758 14718469 -14286187 + ROVER-I_DM LTR Gypsy 3194 3903 -2681 9 697 6511 0 0 0 chrUextra 14718575 14719293 -14285363 + DOC LINE Jockey 1927 2644 -2081 9 697 3164 165 38 17 chrUextra 14720229 14720920 -14283736 + SAR_DM Satellite Satellite 333 1037 -435 9 697 2738 255 4 4 chrUextra 14721029 14721747 -14282909 + ROVER-I_DM LTR Gypsy 3147 3864 -2720 9 697 6456 0 0 1 chrUextra 14721847 14722565 -14282091 + R1_DM LINE R1 1513 2229 -3127 9 697 3314 3 0 0 chrUextra 14722665 14723027 -14281629 - ROO_LTR LTR Pao -66 362 1 9 697 2248 103 65 3 chrUextra 14723496 14723837 -14280819 + Gypsy12_I LTR Gypsy 1193 1554 -3992 9 697 2253 116 0 12 chrUextra 14723844 14724167 -14280489 + Gypsy12_I LTR Gypsy 1503 1821 -3725 9 697 242 135 0 0 chrUextra 14724164 14724201 -14280455 + Gypsy12_I LTR Gypsy 4465 4501 -1045 9 697 6429 1 0 0 chrUextra 14724301 14725019 -14279637 + FW_DM LINE Jockey 1111 1828 -2864 9 697 6429 3 0 1 chrUextra 14725119 14725837 -14278819 + DOC LINE Jockey 1913 2629 -2096 9 697 3035 168 38 14 chrUextra 14725937 14726630 -14278026 - SAR_DM Satellite Satellite -572 900 192 9 697 776 99 0 8 chrUextra 14726533 14726655 -14278001 + ARS406_DM Unknown Unknown 1 121 -232 9 697 28 48 0 0 chrUextra 14727134 14727176 -14277480 + AT_rich Low_complexity Low_complexity 1 42 0 9 697 3221 167 52 18 chrUextra 14727577 14728291 -14276365 + SAR_DM Satellite Satellite 1 737 -203 9 697 3237 179 10 11 chrUextra 14728393 14729109 -14275547 - SAR_DM Satellite Satellite -549 923 209 9 697 6350 1 0 0 chrUextra 14729210 14729927 -14274729 + LSU-rRNA_Dme rRNA rRNA 349 1065 -2835 9 697 895 333 12 10 chrUextra 14730320 14730729 -14273927 - MICROPIA_I LTR Gypsy -622 3854 3347 9 697 3073 194 19 20 chrUextra 14730846 14731563 -14273093 + SAR_DM Satellite Satellite 1 716 -216 9 697 3385 31 121 1 chrUextra 14731663 14732381 -14272275 - PROTOP DNA P -252 853 185 9 697 5596 0 0 38 chrUextra 14732481 14733159 -14271497 - LSU-rRNA_Dme rRNA rRNA -3248 652 1 9 697 1109 15 38 0 chrUextra 14733299 14733432 -14271224 + Invader2_I LTR Gypsy 3069 3206 -1386 9 697 4595 17 15 5 chrUextra 14733421 14734017 -14270639 + Invader2_I LTR Gypsy 3975 4576 -16 9 697 3192 172 30 10 chrUextra 14735759 14736469 -14268187 + SAR_DM Satellite Satellite 332 1055 -417 9 697 5733 35 14 1 chrUextra 14736571 14737289 -14267367 + TRANSIB2 DNA Transib 10 736 -2108 9 697 1449 65 22 49 chrUextra 14737389 14737615 -14267041 - Gypsy12_I LTR Gypsy -5326 220 1 9 697 2826 116 8 51 chrUextra 14737615 14738107 -14266549 - Gypsy12_LTR LTR Gypsy 0 2336 1866 9 697 3388 171 11 13 chrUextra 14738207 14738924 -14265732 - SAR_DM Satellite Satellite -470 1002 287 9 697 5872 4 1 35 chrUextra 14739025 14739743 -14264913 + LSU-rRNA_Dme rRNA rRNA 25 718 -3182 9 697 2694 210 28 46 chrUextra 14739843 14740561 -14264095 + TAHRE LINE telomeric 7168 7872 -2591 9 697 2183 189 53 6 chrUextra 14740661 14741379 -14263277 - SAR_DM Satellite Satellite -942 752 1 9 697 299 342 118 4 chrUextra 14741966 14742195 -14262461 - BLASTOPIA_I LTR Gypsy -1 4480 4226 9 697 262 150 0 0 chrUextra 14742380 14742420 -14262236 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 697 239 125 0 24 chrUextra 14742463 14742504 -14262152 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 697 1378 17 0 22 chrUextra 14742570 14742751 -14261905 + NTS_DM Other Other 25 201 -39 9 697 901 9 0 27 chrUextra 14742803 14742915 -14261741 + NTS_DM Other Other 25 133 -107 9 697 847 10 0 0 chrUextra 14742915 14743014 -14261642 + NTS_DM Other Other 38 136 -104 9 697 34 24 0 0 chrUextra 14743170 14743211 -14261445 + AT_rich Low_complexity Low_complexity 1 41 0 9 697 5738 34 1 0 chrUextra 14743933 14744618 -14260038 - FW_DM LINE Jockey -4006 686 1 9 697 2604 0 0 0 chrUextra 14744754 14745041 -14259615 - QUASIMODO_I LTR Gypsy -5773 287 1 9 697 3835 0 0 5 chrUextra 14745041 14745469 -14259187 - QUASIMODO_LTR LTR Gypsy 0 658 233 9 697 481 16 16 0 chrUextra 14745569 14745630 -14259026 + DM176_LTR LTR Gypsy 446 507 0 9 697 5874 6 3 3 chrUextra 14745630 14746287 -14258369 + LSU-rRNA_Dme rRNA rRNA 917 1573 -2327 9 697 3418 173 4 14 chrUextra 14746388 14747092 -14257564 + SAR_DM Satellite Satellite 405 1101 -371 9 697 2200 193 90 44 chrUextra 14747219 14747919 -14256737 - HETA LINE telomeric -405 5676 4945 9 697 310 158 69 59 chrUextra 14748023 14748124 -14256532 + XDMR_DM Unknown Unknown 259 360 0 9 697 3148 177 10 19 chrUextra 14748038 14748739 -14255917 - SAR_DM Satellite Satellite -353 1119 425 9 697 820 11 0 0 chrUextra 14748841 14748935 -14255721 - NTS_DM Other Other -109 131 38 9 697 907 9 0 27 chrUextra 14748935 14749047 -14255609 - NTS_DM Other Other -107 133 25 9 697 1304 18 0 6 chrUextra 14749099 14749264 -14255392 - NTS_DM Other Other -39 201 38 9 697 881 18 0 27 chrUextra 14749264 14749376 -14255280 - NTS_DM Other Other -107 133 25 9 697 949 23 0 8 chrUextra 14749428 14749559 -14255097 - NTS_DM Other Other -39 201 72 9 697 6445 3 17 0 chrUextra 14749659 14750377 -14254279 - LSU-rRNA_Dme rRNA rRNA -1014 2886 2157 9 697 467 117 106 0 chrUextra 14751297 14751391 -14253265 - ARS406_DM Unknown Unknown -248 105 2 9 697 2931 188 38 13 chrUextra 14751307 14752013 -14252643 + SAR_DM Satellite Satellite 195 918 -554 9 697 2604 17 0 0 chrUextra 14752116 14752411 -14252245 - Copia2_I LTR Copia -751 3411 3117 9 697 22 35 0 0 chrUextra 14752445 14752474 -14252182 + AT_rich Low_complexity Low_complexity 1 29 0 9 697 58 15 0 0 chrUextra 14752649 14752714 -14251942 + AT_rich Low_complexity Low_complexity 1 65 0 9 697 6410 0 1 1 chrUextra 14752933 14753649 -14251007 - R1_DM LINE R1 -3474 1882 1167 9 697 275 93 93 0 chrUextra 14753769 14753823 -14250833 - I_DM LINE I -1028 5203 5145 9 697 5543 19 2 2 chrUextra 14753824 14754467 -14250189 - DMCR1A LINE CR1 0 4470 3828 9 697 2274 64 7 0 chrUextra 14754567 14754863 -14249793 - G5_DM LINE Jockey -587 4269 3972 9 697 21 0 0 0 chrUextra 14754894 14754915 -14249741 + AT_rich Low_complexity Low_complexity 1 21 0 9 697 2980 181 19 16 chrUextra 14755387 14756074 -14248582 - SAR_DM Satellite Satellite -593 879 191 9 697 646 182 0 0 chrUextra 14755977 14756103 -14248553 + ARS406_DM Unknown Unknown 1 126 -227 9 697 6190 4 1 7 chrUextra 14756203 14756921 -14247735 - R1_DM LINE R1 -1227 4129 3416 9 697 5829 13 0 35 chrUextra 14757021 14757739 -14246917 - LSU-rRNA_Dme rRNA rRNA -3096 804 112 9 697 3550 0 0 2 chrUextra 14757839 14758234 -14246422 + ACCORD_LTR LTR Gypsy 165 558 0 9 697 2710 12 3 6 chrUextra 14758234 14758557 -14246099 + ACCORD_I LTR Gypsy 1 322 -5966 9 697 3207 102 241 9 chrUextra 14758657 14759293 -14245363 + TART LINE telomeric 9270 10052 -4425 9 697 246 196 18 0 chrUextra 14759291 14759347 -14245309 + HETA LINE telomeric 3455 3511 -2570 9 697 1323 75 5 0 chrUextra 14759477 14759665 -14244991 - ARS406_DM Unknown Unknown -164 189 1 9 697 2639 161 7 3 chrUextra 14759665 14760189 -14244467 + SAR_DM Satellite Satellite 1 714 -781 9 697 3345 177 8 7 chrUextra 14760295 14761007 -14243649 - SAR_DM Satellite Satellite -593 879 167 9 697 6086 21 6 1 chrUextra 14761111 14761829 -14242827 - R1_DM LINE R1 -1165 4191 3471 9 697 2831 89 10 22 chrUextra 14761952 14762643 -14242013 - DMSAT6 Satellite Satellite 0 683 1 9 697 6407 4 0 0 chrUextra 14762747 14763464 -14241192 - DMRT1B LINE R1 -187 4996 4280 9 697 6449 1 0 1 chrUextra 14763565 14764283 -14240373 + FW_DM LINE Jockey 745 1461 -3231 9 697 1037 0 0 0 chrUextra 14764384 14764499 -14240157 - NTS_DM Other Other -125 115 1 9 697 1930 4 17 13 chrUextra 14764499 14764738 -14239918 - NTS_DM Other Other 0 240 1 9 697 1824 17 17 17 chrUextra 14764738 14764978 -14239678 - NTS_DM Other Other 0 240 1 9 697 774 25 32 32 chrUextra 14764978 14765101 -14239555 - NTS_DM Other Other 0 240 118 9 697 6441 4 0 0 chrUextra 14765201 14765919 -14238737 + ROO_I LTR Pao 5081 5798 -2458 9 697 6446 1 0 0 chrUextra 14766019 14766737 -14237919 - ROO_I LTR Pao -2310 5946 5229 9 697 6299 0 1 1 chrUextra 14766858 14767551 -14237105 - SSU-rRNA_Dme rRNA rRNA 0 1995 1303 9 697 837 81 8 0 chrUextra 14767655 14767778 -14236878 - ARS406_DM Unknown Unknown -229 124 1 9 697 3144 179 9 9 chrUextra 14767682 14768370 -14236286 + SAR_DM Satellite Satellite 192 879 -593 9 697 32 0 0 0 chrUextra 14768663 14768695 -14235961 + AT_rich Low_complexity Low_complexity 1 32 0 9 697 280 29 0 0 chrUextra 14768827 14768861 -14235795 + SSU-rRNA_Dme rRNA rRNA 1 34 -1961 9 697 2788 3 0 6 chrUextra 14768868 14769188 -14235468 + SSU-rRNA_Dme rRNA rRNA 1304 1621 -374 9 697 3327 180 7 8 chrUextra 14770109 14770827 -14233829 + SAR_DM Satellite Satellite 207 923 -549 9 697 2351 56 400 2 chrUextra 14770931 14771383 -14233273 - PROTOP_B DNA P -346 807 176 9 697 726 261 22 19 chrUextra 14771375 14771644 -14233012 + QUASIMODO_I LTR Gypsy 5527 5796 -264 9 697 22 0 0 0 chrUextra 14772342 14772364 -14232292 + AT_rich Low_complexity Low_complexity 1 22 0 9 697 6206 1 1 12 chrUextra 14772563 14773281 -14231375 + DOC LINE Jockey 507 1216 -3509 9 697 4937 0 7 0 chrUextra 14773381 14773934 -14230722 - QUASIMODO_LTR LTR Gypsy -100 558 2 9 697 322 57 38 0 chrUextra 14773934 14773987 -14230669 + (TA)n Simple_repeat Simple_repeat 2 56 0 9 697 21 89 0 0 chrUextra 14775626 14775682 -14228974 + AT_rich Low_complexity Low_complexity 1 56 0 9 697 6133 4 1 0 chrUextra 14775835 14776553 -14228103 - Copia_I LTR Copia -1719 2874 2156 9 697 4093 53 2 4 chrUextra 14776658 14777167 -14227489 + BATUMI_I LTR Pao 3549 4056 -3907 9 697 1227 99 13 2 chrUextra 14777163 14777344 -14227312 + BATUMI_I LTR Pao 4180 4438 -3476 9 697 22 35 0 0 chrUextra 14778569 14778598 -14226058 + AT_rich Low_complexity Low_complexity 1 29 0 9 697 51 31 0 0 chrUextra 14778773 14778838 -14225818 + AT_rich Low_complexity Low_complexity 1 65 0 9 697 3327 181 10 8 chrUextra 14779112 14779824 -14224832 + SAR_DM Satellite Satellite 246 958 -514 9 697 2542 182 31 16 chrUextra 14779925 14780544 -14224112 + SAR_DM Satellite Satellite 449 1076 -396 9 697 441 119 107 0 chrUextra 14780559 14780643 -14224013 + SAR_DM Satellite Satellite 547 639 -833 9 697 1436 15 25 20 chrUextra 14780743 14780942 -14223714 + NTS_DM Other Other 41 240 0 9 697 1835 17 17 17 chrUextra 14780942 14781182 -14223474 + NTS_DM Other Other 1 240 0 9 697 1805 25 17 17 chrUextra 14781182 14781422 -14223234 + NTS_DM Other Other 1 240 0 9 697 339 26 0 0 chrUextra 14781422 14781461 -14223195 + NTS_DM Other Other 1 39 -201 9 697 1194 0 70 0 chrUextra 14781561 14781717 -14222939 + ROO_I LTR Pao 474 640 -7616 9 697 552 130 0 0 chrUextra 14781717 14781809 -14222847 + (CAG)n Simple_repeat Simple_repeat 1 92 0 9 697 4054 0 0 0 chrUextra 14781811 14782279 -14222377 + ROO_I LTR Pao 734 1201 -7055 9 697 261 33 0 0 chrUextra 14782624 14782654 -14222002 + Baggins1 LINE LOA 4727 4756 -697 9 697 741 103 241 0 chrUextra 14782662 14782807 -14221849 - FB4_DM DNA Tc1 -3907 182 3 9 697 486 17 0 0 chrUextra 14783201 14783260 -14221396 + Gypsy12_I LTR Gypsy 5488 5546 0 9 697 2545 199 17 70 chrUextra 14783260 14783915 -14220741 + Gypsy12_LTR LTR Gypsy 1 620 -1716 9 697 5293 27 24 5 chrUextra 14784015 14784675 -14219981 - PROTOP_A DNA P -432 673 1 9 697 4681 27 1 131 chrUextra 14784833 14785551 -14219105 - CIRCE LINE Composite -4357 1999 1375 9 697 6129 29 1 1 chrUextra 14785651 14786369 -14218287 - R1_DM LINE R1 -3310 2046 1329 9 697 6418 8 0 0 chrUextra 14786469 14787187 -14217469 - R1_DM LINE R1 -1546 3810 3093 9 697 6551 0 0 1 chrUextra 14787287 14788005 -14216651 + LSU-rRNA_Dme rRNA rRNA 2679 3395 -505 9 697 1620 12 0 0 chrUextra 14788105 14788355 -14216301 + (TTA)n Simple_repeat Simple_repeat 1 250 0 9 697 663 77 29 188 chrUextra 14788393 14788633 -14216023 - MDG1_I LTR Gypsy 0 6596 6395 9 697 1293 66 0 5 chrUextra 14788626 14788823 -14215833 - MDG1_I LTR Gypsy -392 6204 6009 9 697 1696 40 0 0 chrUextra 14789440 14789641 -14215015 + PROTOP_A DNA P 1 201 -904 9 697 3359 174 10 7 chrUextra 14789753 14790459 -14214197 + SAR_DM Satellite Satellite 326 1033 -439 9 697 6579 1 0 0 chrUextra 14790559 14791277 -14213379 - R2_DM LINE R2 -2094 1513 796 9 697 3009 36 65 4 chrUextra 14791377 14791888 -14212768 + PROTOP_A DNA P 563 1104 -1 9 697 1671 34 0 0 chrUextra 14791889 14792095 -14212561 - DOC3_DM LINE Jockey -1670 3070 2865 9 697 2026 174 20 18 chrUextra 14792217 14792897 -14211759 + SAR_DM Satellite Satellite 1 681 -684 9 697 2186 16 4 11 chrUextra 14793013 14793273 -14211383 + BATUMI_I LTR Pao 6744 7001 -962 9 697 3772 14 0 5 chrUextra 14793299 14793731 -14210925 - BATUMI_I LTR Pao -1543 6420 5991 9 697 3350 3 43 0 chrUextra 14794649 14795365 -14209291 + IDEFIX_I LTR Gypsy 2116 2862 -2766 9 697 6300 1 0 0 chrUextra 14795467 14796185 -14208471 - ROO_I LTR Pao -3210 5046 4329 9 697 4897 25 0 2 chrUextra 14796285 14796848 -14207808 - BEL_I LTR Pao -4841 563 2 9 697 1083 80 0 0 chrUextra 14796852 14797003 -14207653 - BEL_LTR LTR Pao 0 361 211 9 697 3910 94 10 42 chrUextra 14797115 14797821 -14206835 + Gypsy12_I LTR Gypsy 1 738 -4808 9 697 3026 198 13 20 chrUextra 14797921 14798639 -14206017 - SAR_DM Satellite Satellite -629 712 1 9 697 1116 0 0 8 chrUextra 14798739 14798865 -14205791 + DIVER_I LTR Pao 5519 5643 0 9 697 1949 4 0 9 chrUextra 14798865 14799091 -14205565 + DIVER_LTR LTR Pao 1 224 0 9 697 552 7 135 0 chrUextra 14799111 14799407 -14205249 + (TA)n Simple_repeat Simple_repeat 1 336 0 9 697 4864 21 0 120 chrUextra 14799557 14800275 -14204381 - CIRCE LINE Composite -4525 1831 1200 9 697 3437 163 16 10 chrUextra 14800383 14801090 -14203566 + SAR_DM Satellite Satellite 346 1056 -416 9 697 4991 11 1 1 chrUextra 14801197 14801911 -14202745 - DM412B_LTR LTR Gypsy 0 571 1 9 697 233 231 0 0 chrUextra 14802661 14802713 -14201943 - Gypsy7_I LTR Gypsy -1691 3293 3242 9 697 1527 29 23 19 chrUextra 14802883 14803097 -14201559 + NTS_DM Other Other 26 240 0 9 697 593 92 35 0 chrUextra 14803097 14803184 -14201472 + NTS_DM Other Other 1 90 -150 9 697 28 48 0 0 chrUextra 14803457 14803499 -14201157 + AT_rich Low_complexity Low_complexity 1 42 0 9 697 6236 22 0 0 chrUextra 14804465 14805183 -14199473 - DMRT1A LINE R1 -929 4254 3537 9 697 5886 21 0 8 chrUextra 14805283 14806001 -14198655 + IDEFIX_I LTR Gypsy 2831 3542 -2086 9 697 5929 18 70 1 chrUextra 14806101 14806819 -14197837 - FW_DM LINE Jockey -367 4325 3559 9 697 3776 14 0 0 chrUextra 14806919 14807343 -14197313 - Copia2_I LTR Copia -622 3540 3117 9 697 22 35 0 0 chrUextra 14807377 14807406 -14197250 + AT_rich Low_complexity Low_complexity 1 29 0 9 697 49 18 0 0 chrUextra 14807581 14807637 -14197019 + AT_rich Low_complexity Low_complexity 1 56 0 9 697 3521 213 0 0 chrUextra 14807738 14808455 -14196201 + ROVER-I_DM LTR Gypsy 2963 3679 -2905 9 697 2721 187 32 19 chrUextra 14808563 14809273 -14195383 + SAR_DM Satellite Satellite 1 719 -313 9 697 6415 11 0 0 chrUextra 14809373 14810091 -14194565 - DOC2_DM LINE Jockey -712 4081 3364 9 697 1140 315 44 42 chrUextra 14810193 14810892 -14193764 + HMSBEAGLE_I LTR Gypsy 3887 4587 -1942 9 87 5963 25 10 0 chrUextra 14811011 14811727 -14192929 + IDEFIX_I LTR Gypsy 984 1706 -3922 9 698 2829 186 72 14 chrUextra 14811828 14812536 -14192120 + SAR_DM Satellite Satellite 469 1217 -255 9 698 499 34 0 0 chrUextra 14812486 14812545 -14192111 - ARS406_DM Unknown Unknown -164 189 131 9 698 6130 25 1 3 chrUextra 14812645 14813363 -14191293 - R1_DM LINE R1 -145 5211 4495 9 698 600 287 45 53 chrUextra 14813541 14814115 -14190541 - Invader4_I LTR Gypsy -3234 1242 691 9 698 2335 11 0 0 chrUextra 14814282 14814542 -14190114 + R1_DM LINE R1 5095 5354 -2 9 698 3247 62 5 5 chrUextra 14814578 14814999 -14189657 + R1_DM LINE R1 24 444 -4912 9 698 2639 0 0 0 chrUextra 14815099 14815385 -14189271 - ROO_LTR LTR Pao -142 286 1 9 698 3547 5 28 0 chrUextra 14815385 14815817 -14188839 - ROO_I LTR Pao 0 8256 7813 9 698 282 208 0 14 chrUextra 14815917 14815990 -14188666 + DMLTR5 LTR Gypsy 195 266 0 9 698 372 49 65 16 chrUextra 14815989 14816051 -14188605 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 9 698 259 128 0 21 chrUextra 14816073 14816121 -14188535 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 9 698 1456 218 9 17 chrUextra 14816736 14817155 -14187501 + DM176_I LTR Gypsy 4566 4981 -1439 9 698 1074 146 0 5 chrUextra 14817158 14817351 -14187305 + DM297_I LTR Gypsy 5490 5681 -486 9 698 377 172 10 88 chrUextra 14817350 14817452 -14187204 + DM176_I LTR Gypsy 6278 6371 -49 9 698 6472 3 0 0 chrUextra 14817553 14818271 -14186385 - R1_DM LINE R1 -2070 3286 2569 9 698 2372 0 0 4 chrUextra 14818371 14818638 -14186018 + DM297_LTR LTR Gypsy 149 414 0 9 698 409 108 0 0 chrUextra 14818653 14818718 -14185938 - PROTOP DNA P -3407 1073 1009 9 698 261 89 0 0 chrUextra 14818719 14818764 -14185892 - PROTOP DNA P -3773 707 663 9 698 1965 71 120 0 chrUextra 14818765 14819089 -14185567 + ROOA_I LTR Pao 5898 6260 -589 9 698 928 0 0 0 chrUextra 14819189 14819291 -14185365 - NTS_DM Other Other -138 102 1 9 698 1926 4 17 13 chrUextra 14819291 14819530 -14185126 - NTS_DM Other Other 0 240 1 9 698 1940 0 17 13 chrUextra 14819530 14819769 -14184887 - NTS_DM Other Other 0 240 1 9 698 966 7 29 22 chrUextra 14819769 14819907 -14184749 - NTS_DM Other Other 0 240 102 9 698 3683 74 50 26 chrUextra 14820059 14820725 -14183931 - PROTOP_A DNA P 0 1153 509 9 698 3405 180 10 8 chrUextra 14820825 14821538 -14183118 + SAR_DM Satellite Satellite 334 1047 -425 9 698 5178 80 67 12 chrUextra 14821643 14822361 -14182295 - Gypsy12_I LTR Gypsy -43 5503 4747 9 698 4783 93 2 5 chrUextra 14822461 14823178 -14181478 + BATUMI_I LTR Pao 4315 5137 -2777 9 698 565 115 287 0 chrUextra 14823279 14823401 -14181255 - FB4_DM DNA Tc1 -3930 159 3 9 698 3479 164 11 8 chrUextra 14824097 14824812 -14179844 - SAR_DM Satellite Satellite -404 1068 352 9 698 6229 26 0 0 chrUextra 14824915 14825633 -14179023 - R1_DM LINE R1 -2973 2383 1666 9 698 3441 177 8 8 chrUextra 14825736 14826450 -14178206 + SAR_DM Satellite Satellite 295 1008 -464 9 698 1538 6 6 0 chrUextra 14826551 14826724 -14177932 - LSU-rRNA_Dme rRNA rRNA -1087 2813 2640 9 698 927 10 0 0 chrUextra 14826722 14826824 -14177832 - R1_DM LINE R1 0 5356 5255 9 698 689 26 0 0 chrUextra 14826824 14826902 -14177754 - LSU-rRNA_Dme rRNA rRNA -1245 2655 2578 9 698 3352 3 0 0 chrUextra 14826901 14827269 -14177387 - R2_DM LINE R2 0 3607 3240 9 698 3132 192 19 26 chrUextra 14827369 14828087 -14176569 - SAR_DM Satellite Satellite -544 712 1 9 698 6045 6 1 0 chrUextra 14828187 14828905 -14175751 + QUASIMODO_I LTR Gypsy 3272 3990 -2070 9 698 189 240 0 0 chrUextra 14829825 14830000 -14174656 + (TTAA)n Simple_repeat Simple_repeat 4 178 0 9 698 216 131 224 0 chrUextra 14830003 14830110 -14174546 + (TTTAG)n Simple_repeat Simple_repeat 3 133 0 9 698 221 232 0 0 chrUextra 14830035 14830104 -14174552 + (TTAA)n Simple_repeat Simple_repeat 3 71 0 9 698 839 0 0 0 chrUextra 14832279 14832371 -14172285 - NTS_DM Other Other -148 92 1 9 698 1940 0 17 13 chrUextra 14832371 14832610 -14172046 - NTS_DM Other Other 0 240 1 9 698 1940 0 17 13 chrUextra 14832610 14832849 -14171807 - NTS_DM Other Other 0 240 1 9 698 916 28 28 28 chrUextra 14832849 14832994 -14171662 - NTS_DM Other Other 0 240 96 9 698 1620 0 0 0 chrUextra 14833911 14834174 -14170482 + (CACAA)n Simple_repeat Simple_repeat 1 263 0 9 698 3683 2 0 2 chrUextra 14834179 14834582 -14170074 - STALKER4_LTR LTR Gypsy 0 402 1 9 698 372 22 22 0 chrUextra 14834582 14834628 -14170028 - STALKER4_I LTR Gypsy 0 6530 6484 9 698 936 9 0 27 chrUextra 14834776 14834888 -14169768 + NTS_DM Other Other 25 133 -107 9 698 1350 18 0 6 chrUextra 14834888 14835053 -14169603 + NTS_DM Other Other 38 201 -39 9 698 936 9 0 27 chrUextra 14835105 14835217 -14169439 + NTS_DM Other Other 25 133 -107 9 698 1350 18 0 6 chrUextra 14835217 14835382 -14169274 + NTS_DM Other Other 38 201 -39 9 698 23 54 0 0 chrUextra 14835547 14835584 -14169072 + AT_rich Low_complexity Low_complexity 1 37 0 9 698 936 9 0 27 chrUextra 14835610 14835722 -14168934 + NTS_DM Other Other 25 133 -107 9 698 1350 18 0 6 chrUextra 14835722 14835887 -14168769 + NTS_DM Other Other 38 201 -39 9 698 21 57 0 0 chrUextra 14835887 14835922 -14168734 + AT_rich Low_complexity Low_complexity 1 35 0 9 698 898 9 9 27 chrUextra 14835948 14836059 -14168597 + NTS_DM Other Other 25 133 -107 9 698 876 0 0 0 chrUextra 14836059 14836155 -14168501 + NTS_DM Other Other 38 133 -107 9 698 881 28 0 0 chrUextra 14836155 14836262 -14168394 + NTS_DM Other Other 38 144 -96 9 698 5778 38 48 4 chrUextra 14836362 14837078 -14167578 + G2_DM LINE Jockey 837 1583 -1519 9 698 5944 31 1 10 chrUextra 14837998 14838713 -14165943 - BATUMI_I LTR Pao -4389 3574 2866 9 698 3575 244 39 22 chrUextra 14838813 14840347 -14164309 + SAR_DM Satellite Satellite 1 1560 -216 9 698 2486 54 0 0 chrUextra 14840793 14841091 -14163565 - PROTOP DNA P 0 4480 4183 9 698 3232 58 116 19 chrUextra 14841265 14841981 -14162675 + BATUMI_I LTR Pao 1010 1794 -6169 9 698 3025 179 40 8 chrUextra 14842081 14842798 -14161858 - SAR_DM Satellite Satellite -621 739 1 9 698 6694 1 0 0 chrUextra 14842898 14843615 -14161041 - Gypsy6_I LTR Gypsy -412 6600 5884 9 698 2297 159 39 8 chrUextra 14843821 14844303 -14160353 + SAR_DM Satellite Satellite 425 921 -551 9 698 198 0 0 160 chrUextra 14844534 14844703 -14159953 + (TCTTG)n Simple_repeat Simple_repeat 2 143 0 9 698 1747 174 18 7 chrUextra 14845350 14846066 -14158590 - SAR_DM Satellite Satellite -563 724 1 9 698 3238 167 20 56 chrUextra 14846166 14846882 -14157774 - SAR_DM Satellite Satellite -1092 690 1 9 698 467 18 18 0 chrUextra 14846983 14847038 -14157618 - NTS_DM Other Other -184 56 1 9 698 1899 17 17 17 chrUextra 14847038 14847278 -14157378 - NTS_DM Other Other 0 240 1 9 698 1899 17 17 17 chrUextra 14847278 14847518 -14157138 - NTS_DM Other Other 0 240 1 9 698 1319 17 22 22 chrUextra 14847518 14847700 -14156956 - NTS_DM Other Other 0 240 59 9 698 5531 52 14 1 chrUextra 14847801 14848517 -14156139 + IDEFIX_I LTR Gypsy 4318 5042 -586 9 698 408 70 18 0 chrUextra 14849117 14849174 -14155482 + BARI1 DNA Tc1 37 94 -1656 9 698 810 118 63 44 chrUextra 14849175 14849334 -14155322 - Gypsy12A_LTR LTR Gypsy -1695 585 424 9 698 5408 69 0 13 chrUextra 14849434 14850151 -14154505 + R1_DM LINE R1 194 901 -4455 9 698 4987 41 50 45 chrUextra 14850251 14850967 -14153689 + PROTOP_A DNA P 40 759 -346 9 698 6519 3 0 1 chrUextra 14851068 14851785 -14152871 + DMRT1A LINE R1 3845 4560 -623 9 698 6424 14 1 0 chrUextra 14851885 14852602 -14152054 - DM1731_I LTR Copia -2766 1210 493 9 698 5947 11 1 1 chrUextra 14852702 14853419 -14151237 - DM297_I LTR Gypsy -20 6147 5431 9 698 6484 7 0 1 chrUextra 14853519 14854236 -14150420 + DOC LINE Jockey 2615 3330 -1395 9 698 281 331 41 41 chrUextra 14855561 14855860 -14148796 - BLASTOPIA_I LTR Gypsy -703 4185 3608 9 698 484 34 17 0 chrUextra 14855970 14856029 -14148627 - DIVER_I LTR Pao -5583 60 1 9 698 1018 117 0 24 chrUextra 14856130 14856297 -14148359 - DIVER_LTR LTR Pao -61 163 1 9 698 3324 44 0 0 chrUextra 14856297 14856687 -14147969 - DIVER_I LTR Pao 0 5643 5254 9 698 534 119 36 0 chrUextra 14857002 14857086 -14147570 - NTS_DM Other Other -150 90 4 9 698 1401 6 0 18 chrUextra 14857196 14857361 -14147295 - NTS_DM Other Other -78 162 1 9 698 1031 14 28 21 chrUextra 14857361 14857504 -14147152 - NTS_DM Other Other 0 240 97 9 698 635 96 3 19 chrUextra 14857604 14857716 -14146940 - DMRT1B LINE R1 -5110 73 1 9 698 3116 47 59 0 chrUextra 14857893 14858300 -14146356 - DOC3_DM LINE Jockey -2950 1790 1360 9 698 6031 26 3 0 chrUextra 14858421 14859138 -14145518 + DMRT1B LINE R1 415 1133 -4050 9 698 1258 75 0 56 chrUextra 14859238 14859506 -14145150 - DMSAT6 Satellite Satellite -69 401 149 9 698 1492 88 15 0 chrUextra 14859509 14859713 -14144943 + Gypsy8_I LTR Gypsy 274 480 -3867 9 698 509 240 112 8 chrUextra 14859702 14859950 -14144706 + Gypsy8_I LTR Gypsy 1857 2085 -4568 9 698 6197 21 1 1 chrUextra 14860055 14860772 -14143884 + R1_DM LINE R1 3484 4200 -1156 9 698 22 56 0 0 chrUextra 14860992 14861028 -14143628 + AT_rich Low_complexity Low_complexity 1 36 0 9 698 374 178 50 101 chrUextra 14861073 14861192 -14143464 + Copia_I LTR Copia 4401 4513 -80 9 698 2397 239 75 12 chrUextra 14861691 14862381 -14142275 - Gypsy4_I LTR Gypsy -3472 2816 2083 9 698 21 89 0 0 chrUextra 14862809 14862865 -14141791 + AT_rich Low_complexity Low_complexity 1 56 0 9 698 3099 6 6 0 chrUextra 14862884 14863223 -14141433 - SSU-rRNA_Dme rRNA rRNA 0 1995 1655 9 698 2386 114 24 10 chrUextra 14863323 14864040 -14140616 - DMSAT6 Satellite Satellite -30 726 1 9 698 1079 22 7 7 chrUextra 14864140 14864278 -14140378 - NTS_DM Other Other -65 175 38 9 698 906 9 0 35 chrUextra 14864278 14864391 -14140265 - NTS_DM Other Other -107 133 25 9 698 1350 18 0 6 chrUextra 14864443 14864608 -14140048 - NTS_DM Other Other -39 201 38 9 698 936 9 0 27 chrUextra 14864608 14864720 -14139936 - NTS_DM Other Other -107 133 25 9 698 22 56 0 0 chrUextra 14864746 14864782 -14139874 + AT_rich Low_complexity Low_complexity 1 36 0 9 698 268 176 0 19 chrUextra 14864795 14864847 -14139809 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 698 6309 29 1 0 chrUextra 14864957 14865674 -14138982 - DMCR1A LINE CR1 -2916 1554 837 9 698 6479 10 1 0 chrUextra 14865774 14866491 -14138165 + Invader1_I LTR Gypsy 2454 3171 -15 9 698 5215 52 1 52 chrUextra 14866591 14867308 -14137348 + BATUMI_I LTR Pao 2312 2992 -4971 9 698 396 22 0 0 chrUextra 14867408 14867453 -14137203 - NTS_DM Other Other -158 82 38 9 698 876 0 0 0 chrUextra 14867453 14867549 -14137107 - NTS_DM Other Other -107 133 38 9 698 898 9 9 27 chrUextra 14867549 14867660 -14136996 - NTS_DM Other Other -107 133 25 9 698 21 57 0 0 chrUextra 14867686 14867721 -14136935 + AT_rich Low_complexity Low_complexity 1 35 0 9 698 1350 18 0 6 chrUextra 14867721 14867886 -14136770 - NTS_DM Other Other -39 201 38 9 698 936 9 0 27 chrUextra 14867886 14867998 -14136658 - NTS_DM Other Other -107 133 25 9 698 496 41 0 14 chrUextra 14868051 14868125 -14136531 - NTS_DM Other Other -39 201 129 9 698 34 24 0 0 chrUextra 14868422 14868463 -14136193 + AT_rich Low_complexity Low_complexity 1 41 0 9 698 21 95 0 0 chrUextra 14868676 14868739 -14135917 + AT_rich Low_complexity Low_complexity 1 63 0 9 698 1684 0 16 0 chrUextra 14868751 14868942 -14135714 + LSU-rRNA_Dme rRNA rRNA 1 194 -3706 9 698 6504 3 1 4 chrUextra 14869042 14869759 -14134897 + LSU-rRNA_Dme rRNA rRNA 692 1406 -2494 9 698 6260 14 6 4 chrUextra 14869859 14870576 -14134080 + QUASIMODO_I LTR Gypsy 2571 3288 -2772 9 698 1006 0 0 0 chrUextra 14870678 14870789 -14133867 + BARI_DM DNA Tc1 1617 1727 -1 9 698 5605 0 0 0 chrUextra 14870789 14871393 -14133263 + BARI_DM DNA Tc1 4 607 -1121 9 698 1850 58 0 0 chrUextra 14871927 14872153 -14132503 + PROTOP DNA P 74 299 -4181 9 698 479 29 43 0 chrUextra 14872140 14872209 -14132447 + PROTOP DNA P 522 593 -3887 9 698 6167 21 1 3 chrUextra 14872310 14873027 -14131629 + R1_DM LINE R1 3696 4411 -945 9 698 6674 0 1 1 chrUextra 14873127 14873844 -14130812 - LSU-rRNA_Dme rRNA rRNA -40 3860 3144 9 698 6265 18 21 0 chrUextra 14873944 14874661 -14129995 + DOC2_DM LINE Jockey 2228 2959 -1834 9 698 6337 14 0 0 chrUextra 14874761 14875478 -14129178 - DMRT1B LINE R1 -2110 3073 2357 9 698 6244 26 1 0 chrUextra 14875578 14876295 -14128361 + R1_DM LINE R1 4211 4928 -428 9 698 6620 1 0 0 chrUextra 14876395 14877112 -14127544 - DMRT1B LINE R1 -1114 4069 3353 9 698 511 0 0 0 chrUextra 14877212 14877267 -14127389 - NTS_DM Other Other -148 92 38 9 698 936 9 0 27 chrUextra 14877267 14877379 -14127277 - NTS_DM Other Other -107 133 25 9 698 22 56 0 0 chrUextra 14877406 14877442 -14127214 + AT_rich Low_complexity Low_complexity 1 36 0 9 698 278 176 0 19 chrUextra 14877455 14877507 -14127149 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 698 268 196 0 19 chrUextra 14877538 14877590 -14127066 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 698 250 216 0 19 chrUextra 14877630 14877682 -14126974 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 698 268 196 0 19 chrUextra 14877722 14877774 -14126882 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 698 27 0 0 0 chrUextra 14877776 14877803 -14126853 + AT_rich Low_complexity Low_complexity 1 27 0 9 698 505 0 0 0 chrUextra 14877875 14877929 -14126727 - LSU-rRNA_Dme rRNA rRNA 0 3900 3847 9 698 1718 299 15 14 chrUextra 14878086 14878738 -14125918 + HMSBEAGLE_I LTR Gypsy 2873 3525 -3004 9 698 6510 3 0 0 chrUextra 14878846 14879563 -14125093 + LSU-rRNA_Dme rRNA rRNA 339 1055 -2845 9 698 6678 0 1 1 chrUextra 14879663 14880380 -14124276 - LSU-rRNA_Dme rRNA rRNA -246 3654 2938 9 698 260 200 0 20 chrUextra 14880480 14880531 -14124125 - LSU-rRNA_Dme rRNA rRNA -1281 2619 2570 9 698 5276 2 0 0 chrUextra 14880635 14881197 -14123459 - LSU-rRNA_Dme rRNA rRNA -2 3898 3337 9 698 6475 8 8 0 chrUextra 14881297 14882014 -14122642 - Copia2_I LTR Copia -2761 1401 679 9 698 6470 10 4 0 chrUextra 14882114 14882831 -14121825 - Gypsy4_I LTR Gypsy -3137 3151 2432 9 698 5110 19 3 43 chrUextra 14882931 14883551 -14121105 - CIRCE LINE Composite -5761 595 1 9 698 832 31 0 0 chrUextra 14883551 14883648 -14121008 - CIRCE LINE Composite 0 6356 6260 9 698 6152 25 3 1 chrUextra 14883748 14884465 -14120191 + R1_DM LINE R1 3592 4309 -1047 9 698 6249 8 0 0 chrUextra 14884565 14885282 -14119374 - DM297_I LTR Gypsy -1331 4836 4120 9 698 6214 10 0 0 chrUextra 14885382 14886099 -14118557 - R1_DM LINE R1 -4272 1084 368 9 698 338 231 18 44 chrUextra 14886199 14886312 -14118344 + HETRP_DM Satellite Satellite 1573 1682 -190 9 698 724 194 11 68 chrUextra 14886442 14886619 -14118037 + HETRP_DM Satellite Satellite 1518 1684 -188 9 698 733 188 13 25 chrUextra 14886741 14886899 -14117757 + HETRP_DM Satellite Satellite 1529 1684 -188 9 698 4181 28 96 3 chrUextra 14887017 14887733 -14116923 - ROOA_I LTR Pao -595 6254 5472 9 698 6177 18 25 0 chrUextra 14887833 14888550 -14116106 - R1_DM LINE R1 -3072 2284 1550 9 698 5422 25 7 14 chrUextra 14888650 14889367 -14115289 + Gypsy12_LTR LTR Gypsy 1301 2012 -324 9 698 3826 38 152 0 chrUextra 14889467 14890184 -14114472 + R1_DM LINE R1 1190 2015 -3341 9 698 6244 1 0 1 chrUextra 14890284 14891001 -14113655 + LSU-rRNA_Dme rRNA rRNA 2709 3424 -476 9 698 6203 1 0 0 chrUextra 14891101 14891818 -14112838 + DOC LINE Jockey 2803 3519 -1206 9 698 686 169 144 5 chrUextra 14891918 14892126 -14112530 + TART_B1 LINE telomeric 1436 1672 -8982 9 698 3874 51 2 0 chrUextra 14892125 14892635 -14112021 + TART LINE telomeric 1823 2333 -12144 9 698 1561 195 14 7 chrUextra 14892735 14893449 -14111207 - SAR_DM Satellite Satellite -702 718 1 9 698 1627 217 60 60 chrUextra 14893646 14894260 -14110396 + Gypsy12_LTR LTR Gypsy 831 1444 -892 9 698 2021 208 17 45 chrUextra 14894371 14894904 -14109752 - Gypsy12_LTR LTR Gypsy -1818 518 1 9 698 407 273 0 0 chrUextra 14894904 14895026 -14109630 - DM297_I LTR Gypsy -2709 3458 3337 9 698 345 98 0 0 chrUextra 14895033 14895084 -14109572 - Gypsy12_I LTR Gypsy -4570 976 926 9 698 2330 231 31 37 chrUextra 14895188 14895898 -14108758 - ROVER-I_DM LTR Gypsy -4175 2409 1704 9 698 5671 7 1 1 chrUextra 14896003 14896688 -14107968 - G6_DM LINE Jockey -1357 685 1 9 698 4972 92 1 0 chrUextra 14896820 14897536 -14107120 + S_DM DNA Tc1 345 1061 -675 9 698 2956 164 49 25 chrUextra 14897637 14898352 -14106304 - SAR_DM Satellite Satellite -372 1100 369 9 698 464 262 0 0 chrUextra 14898699 14898821 -14105835 + BS LINE Jockey 1981 2102 -3024 9 698 302 276 0 0 chrUextra 14899003 14899101 -14105555 + BS LINE Jockey 2077 2174 -2952 9 698 267 122 0 0 chrUextra 14899130 14899171 -14105485 + HMSBEAGLE_I LTR Gypsy 3783 3823 -2706 9 698 5624 6 152 0 chrUextra 14899271 14899988 -14104668 + Gypsy_I LTR Gypsy 34 859 -5648 9 698 495 184 357 0 chrUextra 14900089 14900316 -14104340 + PROTOP DNA P 3973 4280 -200 9 698 314 299 102 10 chrUextra 14900442 14900638 -14104018 - MICROPIA_I LTR Gypsy -626 3850 3668 9 698 275 296 0 0 chrUextra 14900724 14900805 -14103851 - MICROPIA_I LTR Gypsy -682 3794 3714 9 698 5734 34 0 0 chrUextra 14900905 14901622 -14103034 + R1_DM LINE R1 2367 3083 -2273 9 698 5998 1 0 0 chrUextra 14901722 14902439 -14102217 - DM176_I LTR Gypsy -4062 2358 1642 9 698 5795 11 3 0 chrUextra 14902539 14903256 -14101400 - STALKER4_I LTR Gypsy -2980 3550 2832 9 698 503 136 68 0 chrUextra 14904994 14905141 -14099515 + GA-rich Low_complexity Low_complexity 1 157 0 9 698 6079 15 1 0 chrUextra 14905807 14906524 -14098132 - DIVER_I LTR Pao -2632 3011 2294 9 698 45 0 0 0 chrUextra 14907666 14907711 -14096945 + AT_rich Low_complexity Low_complexity 1 45 0 9 698 2748 85 2 7 chrUextra 14908259 14908687 -14095969 + CIRCE LINE Composite 4555 4980 -1376 9 698 6099 3 0 0 chrUextra 14909075 14909792 -14094864 - STALKER4_I LTR Gypsy -3678 2852 2136 9 698 374 247 10 112 chrUextra 14909892 14910196 -14094460 - Gypsy12_LTR LTR Gypsy -1662 674 402 9 698 3147 23 5 8 chrUextra 14910219 14910609 -14094047 - PROTOP_A DNA P 0 1105 717 9 698 6179 1 0 0 chrUextra 14910709 14911426 -14093230 - ROO_I LTR Pao -381 7875 7159 9 698 1099 76 17 0 chrUextra 14911526 14911686 -14092970 - IDEFIX_I LTR Gypsy -135 5493 5331 9 698 2692 36 0 0 chrUextra 14911686 14912022 -14092634 - DM1731_LTR LTR Copia 0 336 1 9 698 1809 0 0 23 chrUextra 14912022 14912243 -14092413 - DM1731_I LTR Copia 0 3976 3761 9 698 6074 6 0 0 chrUextra 14912343 14913060 -14091596 - DMRT1A LINE R1 -3515 1668 952 9 698 343 264 0 0 chrUextra 14913257 14913348 -14091308 + Copia2_I LTR Copia 567 657 -3505 9 698 3780 9 0 0 chrUextra 14913434 14913877 -14090779 + Copia2_I LTR Copia 152 594 -3568 9 698 207 69 0 0 chrUextra 14913978 14914007 -14090649 + (TC)n Simple_repeat Simple_repeat 2 30 0 9 698 668 179 7 14 chrUextra 14914138 14914280 -14090376 - HETRP_DM Satellite Satellite -203 1669 1529 9 698 655 186 7 14 chrUextra 14914420 14914562 -14090094 - HETRP_DM Satellite Satellite -203 1669 1529 9 698 3043 182 8 10 chrUextra 14914800 14915510 -14089146 - SAR_DM Satellite Satellite -569 903 195 9 698 2704 172 11 8 chrUextra 14915611 14916225 -14088431 + SAR_DM Satellite Satellite 288 903 -569 9 698 794 20 0 0 chrUextra 14916137 14916235 -14088421 - ARS406_DM Unknown Unknown -166 187 90 9 698 635 62 10 0 chrUextra 14916232 14916328 -14088328 - ARS406_DM Unknown Unknown -195 158 62 9 698 6068 13 0 0 chrUextra 14916431 14917145 -14087511 - FW_DM LINE Jockey -425 4267 3554 9 698 720 251 58 3 chrUextra 14917246 14917558 -14087098 + DM297_I LTR Gypsy 5370 5698 -469 9 698 908 144 134 49 chrUextra 14917546 14917852 -14086804 - STALKER4_I LTR Gypsy -5373 1157 826 9 698 470 186 35 0 chrUextra 14917849 14917962 -14086694 + DM297_I LTR Gypsy 4336 4452 -1715 9 698 5908 7 1 1 chrUextra 14918062 14918779 -14085877 + STALKER4_I LTR Gypsy 5457 6173 -357 9 698 32 0 0 0 chrUextra 14919094 14919126 -14085530 + AT_rich Low_complexity Low_complexity 1 32 0 9 698 2945 3 0 0 chrUextra 14919258 14919596 -14085060 + SSU-rRNA_Dme rRNA rRNA 1 338 -1657 9 698 1759 276 31 41 chrUextra 14919696 14920411 -14084245 + MAX_I LTR Pao 6520 7227 -687 9 698 4301 17 7 11 chrUextra 14919865 14920413 -14084243 - BATUMI_I LTR Pao -962 7001 6456 9 698 1737 281 29 40 chrUextra 14920513 14921230 -14083426 - MAX_I LTR Pao -684 7230 6522 9 698 372 186 9 29 chrUextra 14922147 14922252 -14082404 + XDMR_DM Unknown Unknown 258 360 0 9 698 2827 180 10 23 chrUextra 14922166 14922864 -14081792 - SAR_DM Satellite Satellite -354 1118 430 9 698 1927 4 4 0 chrUextra 14922964 14923193 -14081463 + R1_DM LINE R1 4837 5066 -290 9 698 888 27 27 0 chrUextra 14923190 14923301 -14081355 + R1_DM LINE R1 5243 5356 0 9 698 1190 66 6 0 chrUextra 14923334 14923501 -14081155 + R1_DM LINE R1 1 168 -5188 9 698 1346 55 0 0 chrUextra 14923499 14923681 -14080975 + R1_DM LINE R1 638 819 -4537 9 698 1608 44 0 0 chrUextra 14923781 14923987 -14080669 + DM1731_LTR LTR Copia 131 336 0 9 698 4411 2 2 0 chrUextra 14923987 14924498 -14080158 + DM1731_I LTR Copia 1 512 -3464 9 698 1703 21 17 17 chrUextra 14924598 14924835 -14079821 + NTS_DM Other Other 4 240 0 9 698 1850 4 17 13 chrUextra 14924835 14925074 -14079582 + NTS_DM Other Other 1 240 0 9 698 1824 0 21 13 chrUextra 14925074 14925312 -14079344 + NTS_DM Other Other 1 240 0 9 698 926 34 0 0 chrUextra 14925415 14925532 -14079124 - FW_DM LINE Jockey -4575 117 1 9 698 4750 32 0 3 chrUextra 14925540 14926132 -14078524 + R1_DM LINE R1 1377 1966 -3390 9 698 5880 11 0 13 chrUextra 14926232 14926949 -14077707 - QUASIMODO_I LTR Gypsy -5114 946 239 9 698 5307 29 0 0 chrUextra 14927049 14927698 -14076958 - DMCR1A LINE CR1 -1422 3048 2400 9 698 320 120 0 0 chrUextra 14927715 14927765 -14076891 - Invader3_LTR LTR Gypsy -155 143 94 9 698 5196 49 0 28 chrUextra 14927866 14928583 -14076073 - R1_DM LINE R1 -4446 910 214 9 698 1411 25 56 0 chrUextra 14928719 14928915 -14075741 + FW_DM LINE Jockey 4486 4692 0 9 698 254 29 0 0 chrUextra 14928921 14928955 -14075701 - R1_DM LINE R1 -3966 1390 1357 9 698 3439 36 2 5 chrUextra 14928955 14929400 -14075256 - R1_DM LINE R1 -4150 1206 763 9 698 6160 0 0 0 chrUextra 14929500 14930217 -14074439 - ROO_I LTR Pao -3424 4832 4116 9 698 744 11 0 11 chrUextra 14930317 14930410 -14074246 + R1_DM LINE R1 3565 3656 -1700 9 698 3198 48 1 14 chrUextra 14930410 14930849 -14073807 - STALKER4_LTR LTR Gypsy -3 399 1 9 698 1416 5 5 0 chrUextra 14930849 14931034 -14073622 - STALKER4_I LTR Gypsy 0 6530 6345 9 698 2074 24 0 0 chrUextra 14931135 14931388 -14073268 - DM1731_LTR LTR Copia -83 253 1 9 698 3867 2 7 11 chrUextra 14931388 14931851 -14072805 - DM1731_I LTR Copia 0 3976 3516 9 698 2061 41 4 25 chrUextra 14931951 14932228 -14072428 + G5A_DM LINE Jockey 2568 2838 -3 9 698 533 267 131 20 chrUextra 14932254 14932506 -14072150 - Gypsy7_I LTR Gypsy -3317 1667 1388 9 698 300 0 0 0 chrUextra 14932631 14932668 -14071988 - PROTOP_B DNA P 0 1153 1117 9 698 2510 0 0 0 chrUextra 14932768 14933055 -14071601 - FW_DM LINE Jockey -4405 287 1 9 698 1744 184 10 10 chrUextra 14933074 14933479 -14071177 + SAR_DM Satellite Satellite 499 903 -569 9 698 2746 6 0 3 chrUextra 14933585 14933930 -14070726 - QUASIMODO_I LTR Gypsy -4910 1150 807 9 698 2973 8 3 3 chrUextra 14933948 14934302 -14070354 - QUASIMODO_LTR LTR Gypsy 0 658 305 9 698 6176 1 0 0 chrUextra 14934402 14935119 -14069537 + DM176_I LTR Gypsy 2481 3197 -3223 9 698 1565 3 10 7 chrUextra 14935288 14935607 -14069049 + (CAAAA)n Simple_repeat Simple_repeat 1 320 0 9 698 4937 0 2 0 chrUextra 14936036 14936599 -14068057 + LSU-rRNA_Dme rRNA rRNA 3337 3900 0 9 698 22 56 0 0 chrUextra 14936671 14936707 -14067949 + AT_rich Low_complexity Low_complexity 1 36 0 9 698 246 150 0 0 chrUextra 14936712 14936752 -14067904 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 698 1117 237 176 8 chrUextra 14937044 14937557 -14067099 + BS LINE Jockey 2021 2619 -2507 9 698 1738 222 43 45 chrUextra 14937683 14938387 -14066269 + SAR_DM Satellite Satellite 372 1073 -399 9 698 1284 7 0 0 chrUextra 14938487 14938632 -14066024 + (AATAG)n Simple_repeat Simple_repeat 4 148 0 9 698 861 110 90 0 chrUextra 14938640 14938785 -14065871 - Copia2_LTR_DM LTR Copia 0 198 41 9 698 708 102 0 23 chrUextra 14938798 14938928 -14065728 - Copia2_I LTR Copia 0 4162 4036 9 698 259 132 0 29 chrUextra 14938928 14938998 -14065658 + A-rich Low_complexity Low_complexity 5 72 0 9 698 1485 23 0 0 chrUextra 14939027 14939204 -14065452 + (AATAG)n Simple_repeat Simple_repeat 1 177 0 9 698 470 26 37 73 chrUextra 14939305 14939387 -14065269 + PROTOP DNA P 508 586 -3894 9 698 1138 58 51 11 chrUextra 14939406 14939582 -14065074 + PROTOP DNA P 4162 4344 -136 9 698 26 30 0 0 chrUextra 14939873 14939906 -14064750 + AT_rich Low_complexity Low_complexity 1 33 0 9 698 6108 11 3 0 chrUextra 14940121 14940838 -14063818 - TART_B1 LINE telomeric -1793 8861 8143 9 698 1360 80 44 27 chrUextra 14941757 14942016 -14062640 - R1_DM LINE R1 -5055 301 1 9 698 433 55 0 0 chrUextra 14942016 14942071 -14062585 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2578 9 87 3417 15 0 0 chrUextra 14942067 14942472 -14062184 - R2_DM LINE R2 -3 3604 3200 9 699 6050 3 0 0 chrUextra 14942572 14943289 -14061367 + ROO_I LTR Pao 4224 4940 -3316 9 699 245 125 46 15 chrUextra 14944247 14944312 -14060344 + (TAA)n Simple_repeat Simple_repeat 2 68 0 9 699 22 35 0 0 chrUextra 14944506 14944535 -14060121 + AT_rich Low_complexity Low_complexity 1 29 0 9 699 62 26 0 0 chrUextra 14944828 14944904 -14059752 + AT_rich Low_complexity Low_complexity 1 76 0 9 699 819 215 0 5 chrUextra 14945029 14945239 -14059417 - SAR_DM Satellite Satellite -768 704 496 9 699 994 95 0 0 chrUextra 14945089 14945247 -14059409 + ARS406_DM Unknown Unknown 1 158 -195 9 699 2315 166 14 6 chrUextra 14945254 14945740 -14058916 - SAR_DM Satellite Satellite -569 903 414 9 699 753 11 0 31 chrUextra 14945840 14945937 -14058719 - NTS_DM Other Other -122 118 25 9 699 1252 18 0 6 chrUextra 14945989 14946154 -14058502 - NTS_DM Other Other -39 201 38 9 699 870 9 0 27 chrUextra 14946154 14946266 -14058390 - NTS_DM Other Other -107 133 25 9 699 22 56 0 0 chrUextra 14946292 14946328 -14058328 + AT_rich Low_complexity Low_complexity 1 36 0 9 699 255 125 0 0 chrUextra 14946341 14946381 -14058275 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 699 246 150 0 0 chrUextra 14946424 14946464 -14058192 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 699 246 150 0 0 chrUextra 14946516 14946556 -14058100 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 699 2712 178 22 31 chrUextra 14946659 14947371 -14057285 - SAR_DM Satellite Satellite -318 1154 449 9 699 640 137 0 0 chrUextra 14947474 14947576 -14057080 + TART LINE telomeric 3904 4005 -10472 9 699 2551 134 12 81 chrUextra 14947613 14948191 -14056465 + TART LINE telomeric 6655 7149 -7328 9 699 5401 3 95 0 chrUextra 14948291 14949006 -14055650 + FW_DM LINE Jockey 2985 3767 -925 9 699 1540 92 0 4 chrUextra 14949108 14949360 -14055296 + STALKER4_I LTR Gypsy 5925 6175 -355 9 699 2935 27 0 5 chrUextra 14949355 14949733 -14054923 + NINJA_I LTR Pao 5636 6011 0 9 699 583 12 11 76 chrUextra 14949733 14949825 -14054831 + NINJA_LTR LTR Pao 1 86 -231 9 699 6030 8 7 0 chrUextra 14950742 14951459 -14053197 - DM176_I LTR Gypsy -1830 4590 3869 9 699 2668 190 14 16 chrUextra 14951559 14952276 -14052380 + SAR_DM Satellite Satellite 1 715 -300 9 699 1772 14 0 0 chrUextra 14952376 14952599 -14052057 + IDEFIX_I LTR Gypsy 4446 4668 -960 9 699 3848 20 0 0 chrUextra 14952598 14953093 -14051563 + IDEFIX_I LTR Gypsy 4775 5269 -359 9 699 3034 190 7 8 chrUextra 14953193 14953910 -14050746 + SAR_DM Satellite Satellite 198 913 -559 9 699 3320 38 2 0 chrUextra 14954010 14954429 -14050227 - R1_DM LINE R1 -530 4826 4407 9 699 2358 4 0 0 chrUextra 14954449 14954727 -14049929 - R1_DM LINE R1 -1074 4282 4005 9 699 21 0 0 0 chrUextra 14955185 14955206 -14049450 + AT_rich Low_complexity Low_complexity 1 21 0 9 699 1836 8 17 13 chrUextra 14955685 14955924 -14048732 + NTS_DM Other Other 1 240 0 9 699 1850 4 17 13 chrUextra 14955924 14956163 -14048493 + NTS_DM Other Other 1 240 0 9 699 1634 5 0 0 chrUextra 14956163 14956361 -14048295 + NTS_DM Other Other 1 198 -42 9 699 2837 189 18 24 chrUextra 14956465 14957178 -14047478 + SAR_DM Satellite Satellite 1 708 -208 9 699 350 149 10 147 chrUextra 14957541 14957643 -14047013 - DNAREP1_DM LINE Penelope -6 588 501 9 699 1085 50 12 6 chrUextra 14957647 14957809 -14046847 + S2_DM DNA Tc1 1 163 -1572 9 699 314 173 0 58 chrUextra 14957835 14957921 -14046735 - DNAREP1_DM LINE Penelope -26 568 488 9 699 2692 214 47 18 chrUextra 14958095 14958812 -14045844 + Stalker2_I LTR Gypsy 5150 5887 -1515 9 699 3077 175 7 10 chrUextra 14958922 14959625 -14045031 + SAR_DM Satellite Satellite 195 895 -577 9 699 5954 1 0 3 chrUextra 14959729 14960446 -14044210 + ROO_I LTR Pao 2935 3649 -4607 9 699 6129 3 0 0 chrUextra 14960546 14961263 -14043393 + DMRT1B LINE R1 2334 3050 -2133 9 699 2642 188 29 22 chrUextra 14961363 14962079 -14042577 + SAR_DM Satellite Satellite 1 720 -216 9 699 2832 0 3 0 chrUextra 14962180 14962504 -14042152 + SSU-rRNA_Dme rRNA rRNA 1671 1995 0 9 699 21 89 0 0 chrUextra 14962523 14962579 -14042077 + AT_rich Low_complexity Low_complexity 1 56 0 9 699 2463 184 11 32 chrUextra 14963814 14964490 -14040166 - SAR_DM Satellite Satellite -1033 662 1 9 699 1930 0 0 0 chrUextra 14965477 14965699 -14038957 - LSU-rRNA_Dme rRNA rRNA -3678 222 1 9 699 21 95 0 0 chrUextra 14965711 14965774 -14038882 + AT_rich Low_complexity Low_complexity 1 63 0 9 699 34 24 0 0 chrUextra 14965987 14966028 -14038628 + AT_rich Low_complexity Low_complexity 1 41 0 9 699 5867 14 3 3 chrUextra 14966261 14966977 -14037679 - R1_DM LINE R1 -1106 4250 3535 9 699 6092 1 3 3 chrUextra 14967077 14967790 -14036866 + LSU-rRNA_Dme rRNA rRNA 864 1576 -2324 9 699 3131 174 11 10 chrUextra 14967896 14968608 -14036048 + SAR_DM Satellite Satellite 282 994 -478 9 699 5925 22 1 4 chrUextra 14968709 14969425 -14035231 - BATUMI_I LTR Pao -2141 5822 5109 9 699 5750 29 1 0 chrUextra 14969525 14970241 -14034415 - NINJA_I LTR Pao -1780 4231 3515 9 699 4454 124 0 0 chrUextra 14970341 14971051 -14033605 + HETA LINE telomeric 2538 3247 -2834 9 699 6186 0 0 0 chrUextra 14971157 14971873 -14032783 - R2_DM LINE R2 -2477 1130 415 9 699 468 0 0 0 chrUextra 14971988 14972040 -14032616 + (TA)n Simple_repeat Simple_repeat 2 53 0 9 699 1627 85 68 0 chrUextra 14972063 14972311 -14032345 + Gypsy9_LTR LTR Gypsy 1 265 -71 9 699 1647 89 120 81 chrUextra 14972296 14972689 -14031967 + Gypsy9_I LTR Gypsy 12 419 -4258 9 699 627 48 0 0 chrUextra 14972789 14972872 -14031784 + (TTCTC)n Simple_repeat Simple_repeat 5 87 0 9 699 3394 195 3 7 chrUextra 14973619 14974320 -14030336 + ROVER-I_DM LTR Gypsy 2375 3072 -3512 9 699 1899 171 30 11 chrUextra 14974421 14975137 -14029519 + SAR_DM Satellite Satellite 1 729 -677 9 699 2139 23 0 0 chrUextra 14975237 14975503 -14029153 + FW_DM LINE Jockey 4427 4692 0 9 699 3437 51 2 2 chrUextra 14975503 14975953 -14028703 - R1_DM LINE R1 -3963 1393 944 9 699 5884 13 8 0 chrUextra 14976053 14976766 -14027890 - DOC2_DM LINE Jockey -1464 3329 2611 9 699 2294 198 77 32 chrUextra 14976905 14977585 -14027071 - TAHRE LINE telomeric -583 9880 9171 9 699 3178 11 8 0 chrUextra 14977685 14978059 -14026597 - MICROPIA_I LTR Gypsy -4099 377 1 9 699 2372 16 0 91 chrUextra 14978059 14978401 -14026255 - MICROPIA_LTR LTR Gypsy 0 476 166 9 699 3112 127 2 25 chrUextra 14978501 14979010 -14025646 + Gypsy12_I LTR Gypsy 3001 3497 -2049 9 699 953 122 17 11 chrUextra 14979324 14979498 -14025158 + Gypsy12A_LTR LTR Gypsy 2106 2280 0 9 699 3153 92 9 45 chrUextra 14979498 14980033 -14024623 + Gypsy12_I LTR Gypsy 1 516 -5030 9 699 730 11 11 0 chrUextra 14980133 14980225 -14024431 + Invader1_I LTR Gypsy 3094 3186 0 9 699 3603 12 2 0 chrUextra 14980225 14980647 -14024009 + Invader1_LTR LTR Gypsy 1 423 0 9 699 565 124 198 0 chrUextra 14980662 14980783 -14023873 - DNAREP1_DM LINE Penelope -196 398 254 9 699 5865 20 1 1 chrUextra 14980949 14981665 -14022991 + R1_DM LINE R1 3271 3986 -1370 9 699 6093 6 0 0 chrUextra 14981765 14982481 -14022175 - MDG1_I LTR Gypsy -1733 4863 4148 9 699 3008 174 31 8 chrUextra 14982587 14983296 -14021360 - SAR_DM Satellite Satellite -396 1076 352 9 699 1464 44 0 0 chrUextra 14983411 14983661 -14020995 + (CAATA)n Simple_repeat Simple_repeat 1 250 0 9 699 6123 4 0 0 chrUextra 14984216 14984929 -14019727 + G6_DM LINE Jockey 576 1288 -754 9 699 6216 0 0 0 chrUextra 14985029 14985745 -14018911 + BS2 LINE Jockey 2595 3310 -1411 9 699 473 250 0 0 chrUextra 14986394 14986534 -14018122 + DM176_I LTR Gypsy 1839 1978 -4442 9 699 1008 156 0 0 chrUextra 14986668 14986848 -14017808 + (TA)n Simple_repeat Simple_repeat 1 180 0 9 699 816 186 0 0 chrUextra 14986854 14987031 -14017625 + (CATA)n Simple_repeat Simple_repeat 3 179 0 9 699 1125 128 0 0 chrUextra 14987036 14987216 -14017440 + (TA)n Simple_repeat Simple_repeat 1 180 0 9 699 948 146 0 0 chrUextra 14987213 14987377 -14017279 + (CATA)n Simple_repeat Simple_repeat 2 165 0 9 699 5948 17 0 4 chrUextra 14988293 14989009 -14015647 - Gypsy4_I LTR Gypsy -5119 1169 457 9 699 3162 34 3 0 chrUextra 14989109 14989497 -14015159 - G5_DM LINE Jockey -495 4361 3973 9 699 2874 15 0 0 chrUextra 14989487 14989825 -14014831 - G5_DM LINE Jockey -1041 3815 3478 9 699 6097 1 4 3 chrUextra 14989925 14990641 -14014015 - LSU-rRNA_Dme rRNA rRNA -1319 2581 1865 9 699 3576 16 0 0 chrUextra 14990741 14991170 -14013486 - PROTOP_A DNA P -676 429 1 9 699 1586 164 0 0 chrUextra 14991170 14991449 -14013207 + ROVER-I_DM LTR Gypsy 2858 3136 -3448 9 699 5555 11 38 1 chrUextra 14991557 14992272 -14012384 - DM176_I LTR Gypsy -4698 1722 982 9 699 1819 0 0 0 chrUextra 14992373 14992579 -14012077 + ROO_LTR LTR Pao 223 428 0 9 699 309 91 0 0 chrUextra 14993189 14993233 -14011423 - Baggins1 LINE LOA -619 4834 4791 9 699 1641 28 0 62 chrUextra 14993678 14993905 -14010751 - Baggins1 LINE LOA 0 5453 5241 9 699 4074 34 0 2 chrUextra 14994005 14994511 -14010145 - R1_DM LINE R1 -3524 1832 1328 9 699 1644 42 5 5 chrUextra 14994508 14994721 -14009935 - R1_DM LINE R1 -4179 1177 965 9 699 2936 202 32 14 chrUextra 14994821 14995536 -14009120 + SAR_DM Satellite Satellite 1 727 -208 9 699 5304 1 4 68 chrUextra 14995637 14996353 -14008303 - LSU-rRNA_Dme rRNA rRNA -2060 1840 1171 9 699 5745 31 1 1 chrUextra 14996453 14997169 -14007487 + R1_DM LINE R1 4355 5070 -286 9 699 6208 0 3 1 chrUextra 14997269 14997985 -14006671 + SSU-rRNA_Dme rRNA rRNA 1185 1901 -94 9 699 706 0 0 0 chrUextra 14998085 14998165 -14006491 + LSU-rRNA_Dme rRNA rRNA 2558 2637 -1263 9 699 4675 6 0 6 chrUextra 14998151 14998698 -14005958 + R1_DM LINE R1 4813 5356 0 9 699 915 9 0 0 chrUextra 14998696 14998801 -14005855 + LSU-rRNA_Dme rRNA rRNA 2640 2744 -1156 9 699 1139 189 7 7 chrUextra 14999726 14999805 -14004851 - SAR_DM Satellite Satellite -749 723 456 9 699 1242 90 0 0 chrUextra 14999805 14999994 -14004662 + ARS406_DM Unknown Unknown 1 189 -164 9 699 1949 169 21 19 chrUextra 15000000 15000433 -14004223 - SAR_DM Satellite Satellite -663 809 376 9 699 23 68 0 0 chrUextra 15001115 15001159 -14003497 + AT_rich Low_complexity Low_complexity 1 44 0 9 699 6451 1 0 0 chrUextra 15001349 15002065 -14002591 + Invader2_I LTR Gypsy 657 1372 -3220 9 699 970 45 0 143 chrUextra 15002172 15002354 -14002302 - Invader3_LTR LTR Gypsy -142 156 1 9 699 3444 10 22 0 chrUextra 15002354 15002765 -14001891 - Invader3_I LTR Gypsy 0 4888 4469 9 699 1032 17 0 0 chrUextra 15002762 15002881 -14001775 - Invader3_I LTR Gypsy -230 4658 4540 9 699 393 261 114 96 chrUextra 15003288 15003568 -14001088 - Invader1_LTR LTR Gypsy -55 368 84 9 699 1406 65 16 0 chrUextra 15003797 15003981 -14000675 - Gypsy6A_LTR LTR Gypsy -27 393 207 9 699 3616 0 0 2 chrUextra 15004011 15004414 -14000242 - STALKER4_LTR LTR Gypsy 0 402 1 9 699 784 20 0 0 chrUextra 15004414 15004513 -14000143 - STALKER4_I LTR Gypsy 0 6530 6432 9 699 6163 22 0 7 chrUextra 15004613 15005329 -13999327 + BATUMI_I LTR Pao 5454 6164 -1799 9 699 6043 32 0 0 chrUextra 15005429 15006145 -13998511 + R1_DM LINE R1 2083 2798 -2558 9 699 1123 24 23 29 chrUextra 15006245 15006418 -13998238 + NTS_DM Other Other 69 240 0 9 699 1835 17 17 17 chrUextra 15006418 15006658 -13997998 + NTS_DM Other Other 1 240 0 9 699 1783 21 17 21 chrUextra 15006658 15006899 -13997757 + NTS_DM Other Other 1 240 0 9 699 555 16 0 0 chrUextra 15006899 15006961 -13997695 + NTS_DM Other Other 1 62 -178 9 699 2959 181 13 9 chrUextra 15007878 15008557 -13996099 - SAR_DM Satellite Satellite -593 879 198 9 699 744 104 8 8 chrUextra 15008467 15008593 -13996063 + ARS406_DM Unknown Unknown 1 126 -227 9 699 2415 173 33 27 chrUextra 15009509 15010108 -13994548 + SAR_DM Satellite Satellite 523 1125 -347 9 699 947 24 0 0 chrUextra 15010098 15010225 -13994431 - DOC2_DM LINE Jockey 0 4793 4667 9 699 6004 8 3 1 chrUextra 15010325 15011041 -13993615 + QUASIMODO_I LTR Gypsy 906 1622 -4438 9 699 1201 136 14 14 chrUextra 15011141 15011358 -13993298 + HETA LINE telomeric 5263 5479 -602 9 699 2194 196 8 16 chrUextra 15011356 15011848 -13992808 + HETA LINE telomeric 3455 3942 -2139 9 699 5326 2 3 0 chrUextra 15011957 15012545 -13992111 + LSU-rRNA_Dme rRNA rRNA 2037 2626 -1274 9 699 1199 0 0 0 chrUextra 15012542 15012673 -13991983 + R2_DM LINE R2 1921 2051 -1556 9 699 262 150 0 0 chrUextra 15012815 15012855 -13991801 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 699 250 175 0 0 chrUextra 15012907 15012947 -13991709 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 699 253 150 0 0 chrUextra 15012999 15013039 -13991617 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 699 262 150 0 0 chrUextra 15013186 15013226 -13991430 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 699 253 150 0 0 chrUextra 15013278 15013318 -13991338 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 699 262 150 0 0 chrUextra 15013370 15013410 -13991246 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 699 6181 3 3 0 chrUextra 15013589 15014305 -13990351 + STALKER4_I LTR Gypsy 3013 3730 -2800 9 699 6130 17 1 11 chrUextra 15015221 15015937 -13988719 + BATUMI_I LTR Pao 5642 6350 -1613 9 699 6120 15 0 0 chrUextra 15016037 15016753 -13987903 - ROO_I LTR Pao -2835 5421 4706 9 699 575 30 0 0 chrUextra 15016853 15016920 -13987736 - R1_DM LINE R1 -1264 4092 4026 9 699 5550 20 0 0 chrUextra 15016930 15017568 -13987088 - R1_DM LINE R1 -1690 3666 3029 9 699 1753 66 255 0 chrUextra 15017669 15017991 -13986665 - Copia2_I LTR Copia -3425 737 334 9 699 1328 25 0 0 chrUextra 15018005 15018163 -13986493 + PROTOP DNA P 155 312 -4168 9 699 29 0 0 0 chrUextra 15018177 15018206 -13986450 + AT_rich Low_complexity Low_complexity 1 29 0 9 699 1161 35 0 0 chrUextra 15018206 15018376 -13986280 + PROTOP DNA P 661 830 -3650 9 699 22 35 0 0 chrUextra 15018568 15018597 -13986059 + AT_rich Low_complexity Low_complexity 1 29 0 9 699 37 39 0 0 chrUextra 15018699 15018750 -13985906 + AT_rich Low_complexity Low_complexity 1 51 0 9 699 28 48 0 0 chrUextra 15019105 15019147 -13985509 + AT_rich Low_complexity Low_complexity 1 42 0 9 699 6366 11 0 0 chrUextra 15019301 15020017 -13984639 - R1_DM LINE R1 -66 5290 4575 9 699 21 0 0 0 chrUextra 15020642 15020663 -13983993 + AT_rich Low_complexity Low_complexity 1 21 0 9 699 5052 49 1 55 chrUextra 15020933 15021648 -13983008 - BATUMI_I LTR Pao -4732 3231 2555 9 699 5961 0 0 35 chrUextra 15021749 15022465 -13982191 - LSU-rRNA_Dme rRNA rRNA -3196 704 14 9 699 23 0 0 0 chrUextra 15023053 15023076 -13981580 + AT_rich Low_complexity Low_complexity 1 23 0 9 699 34 24 0 0 chrUextra 15023926 15023967 -13980689 + AT_rich Low_complexity Low_complexity 1 41 0 9 699 348 43 21 0 chrUextra 15024197 15024244 -13980412 + PROTOP DNA P 4431 4479 -1 9 699 26 30 0 0 chrUextra 15024621 15024654 -13980002 + AT_rich Low_complexity Low_complexity 1 33 0 9 699 21 57 0 0 chrUextra 15024700 15024735 -13979921 + AT_rich Low_complexity Low_complexity 1 35 0 9 699 21 89 0 0 chrUextra 15024773 15024829 -13979827 + AT_rich Low_complexity Low_complexity 1 56 0 9 699 1925 43 4 0 chrUextra 15025013 15025247 -13979409 + BATUMI_I LTR Pao 2317 2551 -5412 9 699 3688 39 41 16 chrUextra 15025236 15025729 -13978927 + BATUMI_I LTR Pao 2655 3159 -4804 9 699 2962 90 51 109 chrUextra 15025829 15026377 -13978279 + Invader1_I LTR Gypsy 2671 3186 0 9 699 912 109 25 43 chrUextra 15026378 15026541 -13978115 + Invader1_LTR LTR Gypsy 2 161 -262 9 699 3614 51 55 27 chrUextra 15026645 15027205 -13977451 + PROTOP_B DNA P 361 936 -217 9 699 293 50 0 0 chrUextra 15027198 15027258 -13977398 + PROTOP_B DNA P 572 631 -522 9 699 551 102 31 0 chrUextra 15027263 15027361 -13977295 + PROTOP_B DNA P 794 894 -259 9 699 3375 167 14 13 chrUextra 15028277 15028981 -13975675 + SAR_DM Satellite Satellite 372 1076 -396 9 699 293 0 0 0 chrUextra 15029093 15029127 -13975529 + R1_DM LINE R1 5323 5356 0 9 699 6181 1 0 6 chrUextra 15029125 15029809 -13974847 + LSU-rRNA_Dme rRNA rRNA 2640 3319 -581 9 699 4513 0 2 0 chrUextra 15029909 15030422 -13974234 + BARI_DM DNA Tc1 1214 1727 -1 9 699 1826 0 0 0 chrUextra 15030422 15030625 -13974031 + BARI_DM DNA Tc1 4 206 -1522 9 699 1838 69 4 0 chrUextra 15030725 15030971 -13973685 - BATUMI_I LTR Pao -139 7824 7578 9 699 3541 64 29 0 chrUextra 15030958 15031441 -13973215 + MDG1_I LTR Gypsy 5303 5799 -797 9 699 267 67 200 0 chrUextra 15031543 15031588 -13973068 - DNAREP1_DM LINE Penelope -45 549 496 9 699 4046 170 4 7 chrUextra 15032357 15033073 -13971583 - Gypsy5_I LTR Gypsy -2948 3561 2848 9 699 6183 22 0 0 chrUextra 15033173 15033889 -13970767 + FW_DM LINE Jockey 3780 4495 -197 9 699 6006 21 1 4 chrUextra 15033989 15034705 -13969951 + R1_DM LINE R1 3318 4031 -1325 9 699 344 265 114 96 chrUextra 15035815 15036095 -13968561 - Invader1_LTR LTR Gypsy -55 368 84 9 699 5489 44 4 10 chrUextra 15036437 15037153 -13967503 - IDEFIX_I LTR Gypsy -2091 3537 2826 9 699 6264 13 1 0 chrUextra 15037253 15037969 -13966687 - PROTOP DNA P -1259 3221 2505 9 699 6022 20 70 0 chrUextra 15038069 15038785 -13965871 - DM1731_I LTR Copia -2455 1521 756 9 699 2292 19 15 0 chrUextra 15039052 15039312 -13965344 + STALKER4_LTR LTR Gypsy 1 264 -138 9 699 2500 17 0 0 chrUextra 15039312 15039601 -13965055 - DM176_LTR LTR Gypsy 0 507 219 9 699 4367 4 0 0 chrUextra 15040517 15040995 -13963661 - SSU-rRNA_Dme rRNA rRNA -1517 478 1 9 699 32 0 0 0 chrUextra 15041127 15041159 -13963497 + AT_rich Low_complexity Low_complexity 1 32 0 9 699 5499 40 22 1 chrUextra 15041338 15042049 -13962607 + ZAM_I LTR Gypsy 2496 3221 -4269 9 699 5878 35 0 13 chrUextra 15042152 15042865 -13961791 - BATUMI_I LTR Pao -1647 6316 5613 9 699 25 0 0 0 chrUextra 15043014 15043039 -13961617 + AT_rich Low_complexity Low_complexity 1 25 0 9 699 3426 58 55 42 chrUextra 15043150 15043655 -13961001 + PROTOP_B DNA P 1 509 -644 9 699 260 107 0 51 chrUextra 15043949 15044008 -13960648 + Gypsy5_I LTR Gypsy 88 143 -6366 9 699 3505 18 0 0 chrUextra 15044008 15044401 -13960255 - Invader6_LTR LTR Gypsy 0 393 1 9 699 812 0 0 0 chrUextra 15044401 15044491 -13960165 - Invader6_I LTR Gypsy 0 4099 4010 9 699 1304 18 0 6 chrUextra 15044626 15044791 -13959865 - NTS_DM Other Other -39 201 38 9 699 907 9 0 27 chrUextra 15044791 15044903 -13959753 - NTS_DM Other Other -107 133 25 9 699 1304 18 0 6 chrUextra 15044956 15045121 -13959535 - NTS_DM Other Other -39 201 38 9 699 907 9 0 27 chrUextra 15045121 15045233 -13959423 - NTS_DM Other Other -107 133 25 9 699 243 0 0 0 chrUextra 15045285 15045313 -13959343 - NTS_DM Other Other -39 201 174 9 699 3943 22 7 0 chrUextra 15045414 15045874 -13958782 - R1_DM LINE R1 -61 5295 4833 9 699 2250 16 0 0 chrUextra 15045872 15046129 -13958527 - R1_DM LINE R1 -1697 3659 3403 9 699 34 24 0 0 chrUextra 15046269 15046310 -13958346 + AT_rich Low_complexity Low_complexity 1 41 0 9 699 6391 8 1 0 chrUextra 15047045 15047761 -13956895 - R1_DM LINE R1 -435 4921 4205 9 699 1426 38 135 67 chrUextra 15047861 15048245 -13956411 + PROTOP_B DNA P 489 936 -217 9 699 293 50 0 0 chrUextra 15048238 15048298 -13956358 + PROTOP_B DNA P 572 631 -522 9 699 2069 55 15 0 chrUextra 15048303 15048577 -13956079 + PROTOP_B DNA P 794 1071 -82 9 699 5207 42 0 0 chrUextra 15048677 15049295 -13955361 + R1_DM LINE R1 1211 1828 -3528 9 699 833 50 0 0 chrUextra 15049293 15049393 -13955263 + R1_DM LINE R1 1317 1416 -3940 9 699 2438 106 18 22 chrUextra 15049493 15049994 -13954662 - DOC2_DM LINE Jockey -4197 596 6 9 699 753 10 0 0 chrUextra 15050106 15050209 -13954447 - DOC2_DM LINE Jockey 0 4793 4691 9 699 6320 13 0 0 chrUextra 15050309 15051025 -13953631 - G_DM LINE Jockey -2505 1841 1126 9 699 2970 0 3 0 chrUextra 15051516 15051841 -13952815 - SSU-rRNA_Dme rRNA rRNA 0 1995 1670 9 699 3108 185 7 7 chrUextra 15051941 15052617 -13952039 - SAR_DM Satellite Satellite -602 870 195 9 699 877 98 0 0 chrUextra 15052524 15052657 -13951999 + ARS406_DM Unknown Unknown 1 133 -220 9 699 23 0 0 0 chrUextra 15052890 15052913 -13951743 + AT_rich Low_complexity Low_complexity 1 23 0 9 699 489 131 36 0 chrUextra 15053205 15053289 -13951367 - NTS_DM Other Other -150 90 4 9 699 472 14 0 40 chrUextra 15053399 15053473 -13951183 - NTS_DM Other Other -78 162 92 9 699 6441 1 1 0 chrUextra 15053573 15054289 -13950367 + DOC LINE Jockey 2793 3509 -1216 9 699 380 282 105 25 chrUextra 15054393 15054654 -13950002 + DM297_I LTR Gypsy 2809 2991 -3176 9 699 662 321 16 15 chrUextra 15054703 15055068 -13949588 + GTWIN_I LTR Gypsy 3119 3538 -2883 9 699 6207 20 0 0 chrUextra 15055209 15055921 -13948735 + FW_DM LINE Jockey 3632 4343 -349 9 699 32 0 0 0 chrUextra 15056306 15056338 -13948318 + AT_rich Low_complexity Low_complexity 1 32 0 9 699 2346 4 4 4 chrUextra 15056470 15056737 -13947919 + SSU-rRNA_Dme rRNA rRNA 1 267 -1728 9 699 6107 22 1 3 chrUextra 15057653 15058369 -13946287 + R1_DM LINE R1 1447 2161 -3195 9 699 3162 184 10 20 chrUextra 15058469 15059185 -13945471 + SAR_DM Satellite Satellite 402 1110 -362 9 699 387 0 0 0 chrUextra 15059958 15060001 -13944655 + (GAGAA)n Simple_repeat Simple_repeat 2 44 0 9 699 5553 30 8 14 chrUextra 15060103 15060817 -13943839 + Gypsy12_LTR LTR Gypsy 1144 1853 -483 9 699 555 122 0 0 chrUextra 15060917 15061007 -13943649 + DM297_I LTR Gypsy 5592 5681 -486 9 699 939 119 0 0 chrUextra 15061006 15061149 -13943507 + DM176_I LTR Gypsy 6278 6420 0 9 699 255 215 11 151 chrUextra 15061205 15061298 -13943358 + DM176_LTR LTR Gypsy 190 269 -238 9 699 273 191 59 0 chrUextra 15061407 15061475 -13943181 + DM176_LTR LTR Gypsy 295 366 -141 9 699 608 148 40 16 chrUextra 15061492 15061616 -13943040 + DMTOM1_LTR LTR Gypsy 284 410 0 9 699 5951 25 0 13 chrUextra 15061734 15062449 -13942207 + FW_DM LINE Jockey 909 1614 -3078 9 699 3355 172 10 7 chrUextra 15063383 15064079 -13940577 - SAR_DM Satellite Satellite -396 1076 379 9 699 482 0 0 0 chrUextra 15064181 15064234 -13940422 - SSU-rRNA_Dme rRNA rRNA -1942 53 1 9 699 32 0 0 0 chrUextra 15064366 15064398 -13940258 + AT_rich Low_complexity Low_complexity 1 32 0 9 699 28 48 0 0 chrUextra 15064726 15064768 -13939888 + AT_rich Low_complexity Low_complexity 1 42 0 9 699 6506 3 1 0 chrUextra 15065813 15066529 -13938127 + Gypsy6_I LTR Gypsy 3748 4464 -2548 9 699 6131 7 0 0 chrUextra 15066629 15067345 -13937311 - Invader2_I LTR Gypsy -129 4463 3748 9 699 1184 179 23 10 chrUextra 15067457 15067965 -13936691 - SAR_DM Satellite Satellite -680 514 1 9 699 727 197 32 11 chrUextra 15067976 15068161 -13936495 - SAR_DM Satellite Satellite -683 789 601 9 699 381 317 25 38 chrUextra 15068719 15068944 -13935712 + BLASTOPIA_I LTR Gypsy 3541 3925 -1061 9 699 3271 68 148 0 chrUextra 15069306 15069792 -13934864 - TART LINE telomeric -6595 7882 7325 9 699 3278 177 8 10 chrUextra 15069903 15070609 -13934047 + SAR_DM Satellite Satellite 326 1030 -442 9 699 794 81 16 16 chrUextra 15070709 15070835 -13933821 + PROTOP DNA P 3349 3474 -1006 9 699 843 103 145 6 chrUextra 15070873 15071039 -13933617 + PROTOP DNA P 3726 3914 -566 9 699 1081 137 145 3 chrUextra 15071047 15071425 -13933231 - DNAREP1_DM LINE Penelope -262 332 20 9 699 3810 261 21 36 chrUextra 15071529 15073023 -13931633 + SAR_DM Satellite Satellite 1 1472 -203 9 699 931 73 7 0 chrUextra 15072920 15073056 -13931600 - ARS406_DM Unknown Unknown -164 189 53 9 699 34 24 0 0 chrUextra 15073228 15073269 -13931387 + AT_rich Low_complexity Low_complexity 1 41 0 9 700 21 95 0 0 chrUextra 15073482 15073545 -13931111 + AT_rich Low_complexity Low_complexity 1 63 0 9 700 2469 0 0 79 chrUextra 15073557 15073873 -13930783 + LSU-rRNA_Dme rRNA rRNA 1 291 -3609 9 700 21 89 0 0 chrUextra 15074017 15074073 -13930583 + AT_rich Low_complexity Low_complexity 1 56 0 9 700 5827 14 6 0 chrUextra 15075605 15076321 -13928335 - PROTOP DNA P -255 4225 3506 9 700 5904 36 1 3 chrUextra 15076421 15077137 -13927519 - R1_DM LINE R1 -3834 1522 808 9 700 870 9 9 27 chrUextra 15077240 15077351 -13927305 - NTS_DM Other Other -107 133 25 9 700 1304 18 0 6 chrUextra 15077403 15077568 -13927088 - NTS_DM Other Other -39 201 38 9 700 907 9 0 27 chrUextra 15077568 15077680 -13926976 - NTS_DM Other Other -107 133 25 9 700 22 56 0 0 chrUextra 15077706 15077742 -13926914 + AT_rich Low_complexity Low_complexity 1 36 0 9 700 269 125 0 0 chrUextra 15077755 15077795 -13926861 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 700 262 150 0 0 chrUextra 15077838 15077878 -13926778 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 700 1272 19 0 6 chrUextra 15078053 15078215 -13926441 + NTS_DM Other Other 41 201 -39 9 700 907 9 0 27 chrUextra 15078267 15078379 -13926277 + NTS_DM Other Other 25 133 -107 9 700 1304 18 0 6 chrUextra 15078379 15078544 -13926112 + NTS_DM Other Other 38 201 -39 9 700 21 57 0 0 chrUextra 15078544 15078579 -13926077 + AT_rich Low_complexity Low_complexity 1 35 0 9 700 848 19 9 27 chrUextra 15078605 15078716 -13925940 + NTS_DM Other Other 25 133 -107 9 700 460 19 0 0 chrUextra 15078716 15078769 -13925887 + NTS_DM Other Other 38 90 -150 9 700 6122 25 3 1 chrUextra 15078869 15079585 -13925071 - Gypsy6_I LTR Gypsy -5496 1516 800 9 700 2767 0 0 0 chrUextra 15079685 15079989 -13924667 - BARI_DM DNA Tc1 -1421 307 4 9 700 3633 0 0 0 chrUextra 15079989 15080401 -13924255 - BARI_DM DNA Tc1 -1 1727 1316 9 700 6106 34 0 0 chrUextra 15080501 15081217 -13923439 + MAX_I LTR Pao 4269 4984 -2930 9 700 657 229 6 31 chrUextra 15081467 15081629 -13923027 - HETRP_DM Satellite Satellite -197 1675 1518 9 700 687 193 14 14 chrUextra 15081741 15081888 -13922768 - HETRP_DM Satellite Satellite -197 1675 1529 9 700 429 69 0 0 chrUextra 15082133 15082191 -13922465 - NTS_DM Other Other -179 61 4 9 700 1355 6 0 18 chrUextra 15082302 15082467 -13922189 - NTS_DM Other Other -78 162 1 9 700 1878 8 17 17 chrUextra 15082467 15082707 -13921949 - NTS_DM Other Other 0 240 1 9 700 1005 0 28 21 chrUextra 15082707 15082849 -13921807 - NTS_DM Other Other 0 240 98 9 700 6419 1 1 4 chrUextra 15082950 15083665 -13920991 + SSU-rRNA_Dme rRNA rRNA 112 824 -1171 9 700 293 172 16 0 chrUextra 15083767 15083831 -13920825 + XDMR Unknown Unknown 297 361 0 9 700 3118 186 6 19 chrUextra 15083776 15084479 -13920177 - SAR_DM Satellite Satellite -354 1118 425 9 700 2030 275 29 40 chrUextra 15084581 15085297 -13919359 + MAX_I LTR Pao 6473 7180 -734 9 700 3203 0 0 0 chrUextra 15085397 15085744 -13918912 - ROO_LTR LTR Pao -81 347 1 9 700 3295 0 0 0 chrUextra 15085744 15086113 -13918543 + ROO_I LTR Pao 6210 6578 -1678 9 700 6189 7 8 0 chrUextra 15086213 15086929 -13917727 + QUASIMODO_I LTR Gypsy 2818 3539 -2521 9 700 2672 204 44 8 chrUextra 15087031 15087738 -13916918 - SAR_DM Satellite Satellite -523 949 218 9 700 2733 187 36 42 chrUextra 15087845 15088561 -13916095 - SAR_DM Satellite Satellite -561 911 200 9 700 1184 0 0 0 chrUextra 15089477 15089607 -13915049 - SSU-rRNA_Dme rRNA rRNA -1865 130 1 9 700 32 0 0 0 chrUextra 15089739 15089771 -13914885 + AT_rich Low_complexity Low_complexity 1 32 0 9 700 28 48 0 0 chrUextra 15090099 15090141 -13914515 + AT_rich Low_complexity Low_complexity 1 42 0 9 700 2935 13 0 5 chrUextra 15091109 15091492 -13913164 + STALKER4_I LTR Gypsy 6150 6530 0 9 700 2883 9 15 0 chrUextra 15091492 15091824 -13912832 + STALKER4_LTR LTR Gypsy 1 337 -65 9 700 32 0 0 0 chrUextra 15091939 15091971 -13912685 + AT_rich Low_complexity Low_complexity 1 32 0 9 700 4896 4 0 0 chrUextra 15092103 15092639 -13912017 + SSU-rRNA_Dme rRNA rRNA 1 536 -1459 9 700 2772 0 6 6 chrUextra 15092739 15093060 -13911596 + LSU-rRNA_Dme rRNA rRNA 1468 1788 -2112 9 700 3161 3 0 3 chrUextra 15093104 15093454 -13911202 + LSU-rRNA_Dme rRNA rRNA 1788 2136 -1764 9 700 34 24 0 0 chrUextra 15093842 15093883 -13910773 + AT_rich Low_complexity Low_complexity 1 41 0 9 700 21 95 0 0 chrUextra 15094096 15094159 -13910497 + AT_rich Low_complexity Low_complexity 1 63 0 9 700 890 0 0 0 chrUextra 15094171 15094269 -13910387 + LSU-rRNA_Dme rRNA rRNA 1 98 -3802 9 700 3168 191 13 21 chrUextra 15095187 15095899 -13908757 + SAR_DM Satellite Satellite 1 706 -216 9 700 4329 13 7 9 chrUextra 15096002 15096612 -13908044 - ROO_I LTR Pao -7746 510 1 9 700 895 0 0 0 chrUextra 15096612 15096714 -13907942 - ROO_LTR LTR Pao 0 428 327 9 700 22 56 0 0 chrUextra 15096892 15096928 -13907728 + AT_rich Low_complexity Low_complexity 1 36 0 9 700 294 211 266 0 chrUextra 15097082 15097210 -13907446 + HETA LINE telomeric 4128 4203 -1878 9 700 608 286 49 28 chrUextra 15097241 15097529 -13907127 + G_DM LINE Jockey 421 714 -3632 9 700 1256 14 0 0 chrUextra 15097631 15097778 -13906878 - NTS_DM Other Other -93 147 1 9 700 1472 20 20 20 chrUextra 15097778 15097981 -13906675 - NTS_DM Other Other 0 240 38 9 700 826 10 0 0 chrUextra 15097981 15098077 -13906579 - NTS_DM Other Other -107 133 38 9 700 870 9 9 27 chrUextra 15098077 15098188 -13906468 - NTS_DM Other Other -107 133 25 9 700 21 57 0 0 chrUextra 15098214 15098249 -13906407 + AT_rich Low_complexity Low_complexity 1 35 0 9 700 595 32 21 11 chrUextra 15098249 15098344 -13906312 - NTS_DM Other Other -39 201 106 9 700 3297 178 8 10 chrUextra 15098445 15099158 -13905498 - SAR_DM Satellite Satellite -549 923 212 9 700 6274 0 0 0 chrUextra 15099259 15099974 -13904682 - ROO_I LTR Pao -1282 6974 6260 9 700 6133 31 0 0 chrUextra 15100889 15101604 -13903052 + R1_DM LINE R1 4099 4813 -543 9 700 1575 0 11 5 chrUextra 15102520 15102706 -13901950 + LSU-rRNA_Dme rRNA rRNA 1602 1788 -2112 9 700 4388 4 0 0 chrUextra 15102750 15103234 -13901422 + LSU-rRNA_Dme rRNA rRNA 1788 2271 -1629 9 700 6283 3 0 0 chrUextra 15103334 15104049 -13900607 - QUASIMODO_I LTR Gypsy -2429 3631 2917 9 700 34 24 0 0 chrUextra 15104376 15104417 -13900239 + AT_rich Low_complexity Low_complexity 1 41 0 9 700 21 95 0 0 chrUextra 15104630 15104693 -13899963 + AT_rich Low_complexity Low_complexity 1 63 0 9 700 1440 0 0 0 chrUextra 15104705 15104864 -13899792 + LSU-rRNA_Dme rRNA rRNA 1 159 -3741 9 700 21 89 0 0 chrUextra 15105440 15105496 -13899160 + AT_rich Low_complexity Low_complexity 1 56 0 9 700 29 47 0 0 chrUextra 15105534 15105577 -13899079 + AT_rich Low_complexity Low_complexity 1 43 0 9 700 22 80 0 0 chrUextra 15105623 15105673 -13898983 + AT_rich Low_complexity Low_complexity 1 50 0 9 700 28 48 0 0 chrUextra 15105935 15105977 -13898679 + AT_rich Low_complexity Low_complexity 1 42 0 9 700 514 119 36 0 chrUextra 15106251 15106335 -13898321 - NTS_DM Other Other -150 90 4 9 700 278 22 0 61 chrUextra 15106445 15106494 -13898162 - NTS_DM Other Other -78 162 117 9 700 6502 0 4 0 chrUextra 15106594 15107309 -13897347 - LSU-rRNA_Dme rRNA rRNA -24 3876 3159 9 700 27 125 0 0 chrUextra 15107895 15108111 -13896545 + AT_rich Low_complexity Low_complexity 1 216 0 9 700 6295 1 1 7 chrUextra 15109854 15110569 -13894087 + LSU-rRNA_Dme rRNA rRNA 742 1452 -2448 9 700 1916 116 96 37 chrUextra 15110670 15111209 -13893447 - TART LINE telomeric -6922 7555 6985 9 700 461 45 88 15 chrUextra 15111209 15111277 -13893379 - TAHRE LINE telomeric -11 10452 10380 9 700 697 92 73 0 chrUextra 15111275 15111384 -13893272 - TART LINE telomeric -3814 10663 10547 9 700 6261 6 0 0 chrUextra 15111484 15112199 -13892457 - ROO_I LTR Pao -2799 5457 4743 9 700 1582 222 39 84 chrUextra 15112300 15113000 -13891656 - HETA LINE telomeric -1888 4193 3526 9 700 3475 2 0 0 chrUextra 15113116 15113517 -13891139 + LSU-rRNA_Dme rRNA rRNA 2179 2579 -1321 9 700 2562 3 0 3 chrUextra 15113532 15113829 -13890827 + R2_DM LINE R2 2 297 -3310 9 700 2744 23 23 0 chrUextra 15113929 15114271 -13890385 - FW_DM LINE Jockey -1938 2754 2405 9 700 3249 3 0 0 chrUextra 15114270 15114644 -13890012 + LSU-rRNA_Dme rRNA rRNA 2833 3206 -694 9 700 1086 266 48 44 chrUextra 15114748 15115413 -13889243 + SAR_DM Satellite Satellite 235 902 -570 9 700 351 275 43 24 chrUextra 15115204 15115457 -13889199 - XDMR_DM Unknown Unknown -9 351 94 9 700 5871 31 0 0 chrUextra 15115559 15116274 -13888382 - STALKER4_I LTR Gypsy -2125 4405 3691 9 700 6159 10 0 0 chrUextra 15116374 15117089 -13887567 - Copia2_I LTR Copia -221 3941 3227 9 700 673 123 16 110 chrUextra 15117189 15117371 -13887285 - DM297_LTR LTR Gypsy -179 235 71 9 700 3238 91 4 10 chrUextra 15117381 15117904 -13886752 - DM297_I LTR Gypsy -2 6165 5646 9 700 3119 64 66 0 chrUextra 15118004 15118719 -13885937 + PROTOP DNA P 252 881 -224 9 700 5830 21 1 3 chrUextra 15118819 15119534 -13885122 - R1_DM LINE R1 -1460 3896 3183 9 700 3010 179 6 19 chrUextra 15119634 15120334 -13884322 + SAR_DM Satellite Satellite 429 1119 -353 9 700 3846 0 0 0 chrUextra 15120449 15120891 -13883765 + Copia_I LTR Copia 4152 4593 0 9 700 2163 4 7 4 chrUextra 15120891 15121164 -13883492 + Copia_LTR LTR Copia 1 274 -2 9 700 2193 86 11 33 chrUextra 15121264 15121979 -13882677 - DMSAT6 Satellite Satellite -80 699 1 9 700 6104 10 0 0 chrUextra 15122079 15122794 -13881862 + Invader6_I LTR Gypsy 774 1488 -2611 9 700 4997 3 2 0 chrUextra 15122894 15123508 -13881148 + DM297_I LTR Gypsy 753 1367 -4800 9 700 923 0 0 0 chrUextra 15123495 15123609 -13881047 + DM297_I LTR Gypsy 5339 5452 -715 9 700 2763 175 31 20 chrUextra 15123742 15124424 -13880232 + SAR_DM Satellite Satellite 191 879 -593 9 700 5966 18 1 0 chrUextra 15124524 15125239 -13879417 + R1_DM LINE R1 3915 4630 -726 9 700 497 126 0 11 chrUextra 15125417 15125505 -13879151 - G3_DM LINE Jockey -4416 189 103 9 700 332 252 40 24 chrUextra 15126154 15126280 -13878376 - XDMR Unknown Unknown -233 128 1 9 700 3220 176 7 6 chrUextra 15126170 15126869 -13877787 + SAR_DM Satellite Satellite 246 945 -527 9 700 905 83 7 19 chrUextra 15126989 15127568 -13877088 - RSP Satellite Satellite 0 572 1 9 700 1004 0 9 0 chrUextra 15127568 15127684 -13876972 + (GAGAA)n Simple_repeat Simple_repeat 2 118 0 9 700 3785 3 68 1 chrUextra 15127784 15128487 -13876169 + Invader2_I LTR Gypsy 2457 3206 -1386 9 700 295 0 0 0 chrUextra 15128599 15128634 -13876022 + QUASIMODO_I LTR Gypsy 6026 6060 0 9 700 5648 3 0 0 chrUextra 15128634 15129292 -13875364 + QUASIMODO_LTR LTR Gypsy 1 658 0 9 700 198 0 0 0 chrUextra 15129292 15129314 -13875342 + (TA)n Simple_repeat Simple_repeat 1 22 0 9 700 943 26 0 0 chrUextra 15129414 15129531 -13875125 + DIVER2_I LTR Pao 4031 4147 0 9 700 3042 39 3 8 chrUextra 15129531 15129918 -13874738 + DIVER2_LTR LTR Pao 1 385 0 9 700 2559 199 31 15 chrUextra 15130229 15130944 -13873712 - SAR_DM Satellite Satellite -641 726 1 9 700 695 0 0 0 chrUextra 15131044 15131123 -13873533 + LSU-rRNA_Dme rRNA rRNA 3822 3900 0 9 700 22 56 0 0 chrUextra 15131195 15131231 -13873425 + AT_rich Low_complexity Low_complexity 1 36 0 9 700 246 150 0 0 chrUextra 15131236 15131276 -13873380 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 700 246 150 0 0 chrUextra 15131328 15131368 -13873288 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 700 246 150 0 0 chrUextra 15131420 15131460 -13873196 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 700 255 125 0 0 chrUextra 15131503 15131543 -13873113 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 700 22 56 0 0 chrUextra 15131556 15131592 -13873064 + AT_rich Low_complexity Low_complexity 1 36 0 9 700 808 19 9 27 chrUextra 15131618 15131729 -13872927 + NTS_DM Other Other 25 133 -107 9 700 258 0 0 0 chrUextra 15131729 15131759 -13872897 + NTS_DM Other Other 38 67 -173 9 700 3182 71 103 4 chrUextra 15131859 15132325 -13872331 + Gypsy12_I LTR Gypsy 5035 5546 0 9 700 1106 156 9 28 chrUextra 15132324 15132541 -13872115 + Gypsy12_LTR LTR Gypsy 1 213 -2123 9 700 3173 170 11 13 chrUextra 15133489 15134204 -13870452 + SAR_DM Satellite Satellite 293 1006 -466 9 700 5979 14 0 1 chrUextra 15134304 15135019 -13869637 - DMRT1B LINE R1 -557 4626 3913 9 700 987 17 0 0 chrUextra 15135119 15135236 -13869420 + (CAATA)n Simple_repeat Simple_repeat 5 121 0 9 700 2851 188 14 20 chrUextra 15135934 15136649 -13868007 - SAR_DM Satellite Satellite -316 1156 446 9 700 34 24 0 0 chrUextra 15137732 15137773 -13866883 + AT_rich Low_complexity Low_complexity 1 41 0 9 700 21 95 0 0 chrUextra 15137986 15138049 -13866607 + AT_rich Low_complexity Low_complexity 1 63 0 9 700 1851 0 0 5 chrUextra 15138061 15138279 -13866377 + LSU-rRNA_Dme rRNA rRNA 1 217 -3683 9 700 2508 206 53 4 chrUextra 15138393 15139094 -13865562 - SAR_DM Satellite Satellite -396 1076 342 9 700 3072 175 7 20 chrUextra 15139194 15139909 -13864747 + SAR_DM Satellite Satellite 410 1115 -357 9 700 5910 4 1 0 chrUextra 15140009 15140724 -13863932 + MDG1_I LTR Gypsy 4459 5174 -1422 9 700 310 0 0 0 chrUextra 15141642 15141679 -13862977 + QUASIMODO_LTR LTR Gypsy 622 658 0 9 700 5575 1 7 21 chrUextra 15141679 15142353 -13862303 + QUASIMODO_I LTR Gypsy 1 665 -5395 9 700 6236 6 0 0 chrUextra 15142454 15143169 -13861487 - Invader1_I LTR Gypsy -1008 2178 1464 9 700 5950 1 0 0 chrUextra 15143269 15143951 -13860705 - LSU-rRNA_Dme rRNA rRNA -1431 2469 1788 9 700 5757 21 7 1 chrUextra 15144085 15144799 -13859857 - R1_DM LINE R1 -1424 3932 3215 9 700 5335 25 7 1 chrUextra 15144903 15145614 -13859042 - IDEFIX_I LTR Gypsy -127 5501 4787 9 700 6169 3 0 0 chrUextra 15145714 15146429 -13858227 + STALKER4_I LTR Gypsy 3535 4249 -2281 9 700 2202 0 4 0 chrUextra 15146529 15146784 -13857872 + LSU-rRNA_Dme rRNA rRNA 2326 2581 -1319 9 700 4017 2 0 2 chrUextra 15146782 15147244 -13857412 + R2_DM LINE R2 3 463 -3144 9 700 5771 24 1 0 chrUextra 15147344 15148059 -13856597 + FW_DM LINE Jockey 2833 3548 -1144 9 700 1101 0 8 0 chrUextra 15148974 15149107 -13855549 + ROO_I LTR Pao 8123 8256 0 9 700 3766 0 0 0 chrUextra 15149107 15149535 -13855121 + ROO_LTR LTR Pao 1 428 0 9 700 451 17 0 91 chrUextra 15149535 15149597 -13855059 - CIRCE LINE Composite -4413 1943 1888 9 700 282 287 30 30 chrUextra 15149597 15149664 -13854992 - Gypsy12_I LTR Gypsy -1579 3967 3835 9 700 6067 3 1 4 chrUextra 15149789 15150504 -13854152 + LSU-rRNA_Dme rRNA rRNA 723 1435 -2465 9 700 3116 170 11 10 chrUextra 15150604 15151304 -13853352 - SAR_DM Satellite Satellite -446 1026 326 9 700 6037 1 4 0 chrUextra 15151419 15152134 -13852522 + ROO_I LTR Pao 3685 4402 -3854 9 700 1587 15 5 28 chrUextra 15152234 15152446 -13852210 - BATUMI_I LTR Pao -5134 2829 2623 9 700 3885 11 2 2 chrUextra 15152491 15152949 -13851707 - BATUMI_I LTR Pao -5356 2607 2150 9 700 2967 182 8 17 chrUextra 15153049 15153763 -13850893 + SAR_DM Satellite Satellite 404 1111 -361 9 700 5737 16 7 4 chrUextra 15153864 15154579 -13850077 - R1_DM LINE R1 -1313 4043 3327 9 700 5192 31 4 50 chrUextra 15154679 15155394 -13849262 - TRANSIB2 DNA Transib -142 2702 2021 9 700 2074 166 33 11 chrUextra 15155727 15156208 -13848448 + TART LINE telomeric 8952 9389 -5088 9 700 4713 124 0 0 chrUextra 15156313 15157024 -13847632 - HMSBEAGLE_I LTR Gypsy -2403 4126 3416 9 700 5610 6 0 0 chrUextra 15157124 15157772 -13846884 + DMRT1A LINE R1 4536 5183 0 9 700 526 0 16 0 chrUextra 15157776 15157839 -13846817 + DOC2_DM LINE Jockey 1434 1497 -3296 9 700 5339 3 22 0 chrUextra 15157939 15158566 -13846090 + SSU-rRNA_Dme rRNA rRNA 1355 1995 0 9 700 5167 50 38 14 chrUextra 15158754 15159469 -13845187 - R1_DM LINE R1 -3760 1596 865 9 700 5288 17 45 0 chrUextra 15159569 15160284 -13844372 + STALKER4_I LTR Gypsy 5772 6518 -12 9 700 5688 17 8 13 chrUextra 15160384 15161099 -13843557 - MICROPIA_I LTR Gypsy -530 3946 3235 9 700 494 248 16 176 chrUextra 15161205 15161455 -13843201 - HMSBEAGLE_I LTR Gypsy -510 6019 5810 9 700 367 190 12 12 chrUextra 15161834 15161914 -13842742 - HMSBEAGLE_I LTR Gypsy -711 5818 5739 9 700 5943 20 0 0 chrUextra 15162014 15162729 -13841927 + DIVER_I LTR Pao 3835 4549 -1094 9 700 6055 3 0 3 chrUextra 15162829 15163544 -13841112 + DOC LINE Jockey 2896 3608 -1117 9 700 630 138 45 22 chrUextra 15163997 15164290 -13840366 + CT-rich Low_complexity Low_complexity 1 299 0 9 700 414 53 0 0 chrUextra 15164302 15164359 -13840297 + (GAGAA)n Simple_repeat Simple_repeat 5 61 0 9 700 452 51 0 0 chrUextra 15164459 15164518 -13840138 + DMCR1A LINE CR1 1814 1872 -2598 9 700 1916 94 45 0 chrUextra 15164529 15164817 -13839839 + DMCR1A LINE CR1 3220 3520 -950 9 700 2523 55 71 8 chrUextra 15164810 15165174 -13839482 + DMCR1A LINE CR1 3655 4041 -429 9 700 5805 31 0 0 chrUextra 15165274 15165989 -13838667 - R1_DM LINE R1 -2547 2809 2095 9 700 5651 0 1 0 chrUextra 15166089 15166804 -13837852 + DM176_I LTR Gypsy 5662 6377 -43 9 700 5992 6 1 3 chrUextra 15166904 15167619 -13837037 + R1_DM LINE R1 3537 4250 -1106 9 700 1746 9 0 40 chrUextra 15167719 15167943 -13836713 + ROVER-LTR_DM LTR Gypsy 153 367 0 9 700 3987 0 0 2 chrUextra 15167943 15168434 -13836222 + ROVER-I_DM LTR Gypsy 1 490 -6094 9 700 2765 202 22 12 chrUextra 15168538 15169248 -13835408 + SAR_DM Satellite Satellite 1 717 -208 9 700 2482 195 39 13 chrUextra 15169362 15170064 -13834592 - SAR_DM Satellite Satellite -290 1182 463 9 700 6134 1 0 1 chrUextra 15170164 15170879 -13833777 + R1_DM LINE R1 3064 3777 -1579 9 700 6059 3 0 1 chrUextra 15170979 15171694 -13832962 + LSU-rRNA_Dme rRNA rRNA 485 1198 -2702 9 700 2627 164 17 7 chrUextra 15171798 15172509 -13832147 - SAR_DM Satellite Satellite -980 718 1 9 700 5783 28 4 0 chrUextra 15172611 15173324 -13831332 + MAX_I LTR Pao 5110 5825 -2089 9 700 6210 1 0 0 chrUextra 15173424 15174139 -13830517 - G2_DM LINE Jockey -2291 811 97 9 700 2108 0 0 87 chrUextra 15174239 15174527 -13830129 - LSU-rRNA_Dme rRNA rRNA -3637 263 1 9 700 21 95 0 0 chrUextra 15174539 15174602 -13830054 + AT_rich Low_complexity Low_complexity 1 63 0 9 700 34 24 0 0 chrUextra 15174815 15174856 -13829800 + AT_rich Low_complexity Low_complexity 1 41 0 9 700 32 0 0 0 chrUextra 15175222 15175254 -13829402 + AT_rich Low_complexity Low_complexity 1 32 0 9 700 3328 5 0 0 chrUextra 15175386 15175769 -13828887 + SSU-rRNA_Dme rRNA rRNA 1 383 -1612 9 700 5926 21 1 0 chrUextra 15175869 15176584 -13828072 - R1_DM LINE R1 -105 5251 4536 9 700 5852 16 1 6 chrUextra 15176684 15177399 -13827257 - CIRCE LINE Composite -1686 4670 3959 9 700 2851 183 58 27 chrUextra 15177499 15178214 -13826442 - SAR_DM Satellite Satellite -612 737 1 9 700 3307 166 9 6 chrUextra 15178331 15179029 -13825627 + SAR_DM Satellite Satellite 326 1025 -447 9 700 3673 0 0 0 chrUextra 15179135 15179556 -13825100 - SSU-rRNA_Dme rRNA rRNA -875 1120 700 9 700 2316 8 0 0 chrUextra 15179556 15179822 -13824834 + DMLTR5 LTR Gypsy 1 266 0 9 700 1370 149 34 4 chrUextra 15179971 15180233 -13824423 - Invader3_I LTR Gypsy -128 4760 4491 9 700 310 89 0 0 chrUextra 15180431 15180476 -13824180 - DMRT1B LINE R1 -14 5169 5125 9 700 847 35 271 7 chrUextra 15180479 15180623 -13824033 + PROTOP_B DNA P 1 182 -971 9 700 6136 1 17 1 chrUextra 15180759 15181474 -13823182 - LSU-rRNA_Dme rRNA rRNA -780 3120 2395 9 700 462 108 27 0 chrUextra 15181768 15181842 -13822814 - NTS_DM Other Other -161 79 4 9 700 1301 6 0 18 chrUextra 15181952 15182117 -13822539 - NTS_DM Other Other -78 162 1 9 700 1220 6 23 17 chrUextra 15182117 15182289 -13822367 - NTS_DM Other Other 0 240 68 9 700 4780 2 0 0 chrUextra 15182389 15182946 -13821710 - QUASIMODO_LTR LTR Gypsy -101 557 1 9 700 697 89 0 10 chrUextra 15182952 15183054 -13821602 - DNAREP1_DM LINE Penelope -493 101 1 9 700 6145 3 1 0 chrUextra 15183204 15183919 -13820737 - NOMAD_I LTR Gypsy -879 5693 4978 9 700 316 202 10 20 chrUextra 15184019 15184120 -13820536 + XDMR_DM Unknown Unknown 261 360 0 9 700 2942 185 4 19 chrUextra 15184034 15184734 -13819922 - SAR_DM Satellite Satellite -354 1118 429 9 700 3005 176 11 13 chrUextra 15184834 15185547 -13819109 - SAR_DM Satellite Satellite -515 957 246 9 700 6077 8 1 0 chrUextra 15185649 15186364 -13818292 - R1_DM LINE R1 -555 4801 4086 9 700 2598 17 83 0 chrUextra 15186464 15186812 -13817844 + ROO_I LTR Pao 4910 5286 -2970 9 700 2893 47 29 0 chrUextra 15186794 15187179 -13817477 + ROO_I LTR Pao 5432 5827 -2429 9 700 442 193 61 9 chrUextra 15187279 15187394 -13817262 - ARS406_DM Unknown Unknown -232 121 1 9 700 2710 181 23 17 chrUextra 15187303 15187994 -13816662 + SAR_DM Satellite Satellite 191 885 -587 9 700 692 35 0 0 chrUextra 15188094 15188181 -13816475 - R1_DM LINE R1 -3893 1463 1377 9 700 5040 31 0 0 chrUextra 15188189 15188809 -13815847 + FW_DM LINE Jockey 1 620 -4072 9 700 5795 17 4 4 chrUextra 15188909 15189624 -13815032 + R1_DM LINE R1 3686 4400 -956 9 700 668 104 0 0 chrUextra 15189724 15189830 -13814826 - ARS406_DM Unknown Unknown -247 106 1 9 700 3025 182 7 6 chrUextra 15189737 15190437 -13814219 + SAR_DM Satellite Satellite 195 895 -577 9 700 2662 172 53 31 chrUextra 15190539 15191254 -13813402 - SAR_DM Satellite Satellite -321 1151 421 9 700 5513 44 3 6 chrUextra 15191354 15192069 -13812587 + R1_DM LINE R1 1132 1844 -3512 9 700 1214 5 185 0 chrUextra 15192169 15192353 -13812303 + CIRCE LINE Composite 2918 3135 -3221 9 700 4247 11 4 0 chrUextra 15192351 15192884 -13811772 + STALKER4_I LTR Gypsy 1107 1641 -4889 9 700 3364 0 2 57 chrUextra 15192984 15193421 -13811235 - LSU-rRNA_Dme rRNA rRNA -3487 413 1 9 700 21 95 0 0 chrUextra 15193433 15193496 -13811160 + AT_rich Low_complexity Low_complexity 1 63 0 9 700 268 182 0 0 chrUextra 15193807 15193862 -13810794 + XDMR Unknown Unknown 307 361 0 9 700 3020 177 9 21 chrUextra 15193815 15194514 -13810142 - SAR_DM Satellite Satellite -361 1111 422 9 700 4536 20 7 16 chrUextra 15194614 15195183 -13809473 - CIRCE LINE Composite -3905 2451 1888 9 700 579 296 42 57 chrUextra 15194848 15195250 -13809406 - Gypsy12_I LTR Gypsy -1316 4230 3835 9 700 547 43 0 0 chrUextra 15195259 15195329 -13809327 - CIRCE LINE Composite -4474 1882 1813 9 700 6014 1 1 1 chrUextra 15195429 15196144 -13808512 - ROO_I LTR Pao -2716 5540 4826 9 700 6063 0 1 1 chrUextra 15196244 15196959 -13807697 + R1_DM LINE R1 888 1602 -3754 9 700 25 0 0 0 chrUextra 15197115 15197140 -13807516 + AT_rich Low_complexity Low_complexity 1 25 0 9 700 5936 3 3 1 chrUextra 15197874 15198589 -13806067 - ROO_I LTR Pao -4797 3459 2744 9 700 4557 64 7 17 chrUextra 15198689 15199404 -13805252 + I_DM LINE I 911 1618 -4613 9 700 5834 8 0 1 chrUextra 15199504 15200219 -13804437 + IDEFIX_I LTR Gypsy 316 1029 -4599 9 700 6210 1 0 3 chrUextra 15200319 15201034 -13803622 - SSU-rRNA_Dme rRNA rRNA -1085 910 198 9 700 800 87 0 0 chrUextra 15201134 15201260 -13803396 - ARS406_DM Unknown Unknown -227 126 1 9 700 3015 181 9 7 chrUextra 15201154 15201849 -13802807 + SAR_DM Satellite Satellite 180 875 -597 9 700 285 282 107 89 chrUextra 15202120 15202400 -13802256 + Invader1_LTR LTR Gypsy 84 368 -55 9 700 6150 1 0 0 chrUextra 15202764 15203479 -13801177 + FW_DM LINE Jockey 1168 1882 -2810 9 700 32 0 0 0 chrUextra 15203598 15203630 -13801026 + AT_rich Low_complexity Low_complexity 1 32 0 9 700 4638 2 0 2 chrUextra 15203762 15204294 -13800362 + SSU-rRNA_Dme rRNA rRNA 1 531 -1464 9 701 6042 1 0 0 chrUextra 15205209 15205924 -13798732 - ROO_I LTR Pao -4590 3666 2952 9 701 5978 6 1 3 chrUextra 15206024 15206739 -13797917 + R1_DM LINE R1 3377 4090 -1266 9 701 1108 43 0 0 chrUextra 15206839 15206978 -13797678 - DIVER2_I LTR Pao -3575 572 434 9 701 2264 82 48 3 chrUextra 15207222 15207554 -13797102 - DIVER2_I LTR Pao -3708 439 93 9 701 5672 4 0 35 chrUextra 15207654 15208369 -13796287 + LSU-rRNA_Dme rRNA rRNA 90 779 -3121 9 701 4724 52 32 3 chrUextra 15208523 15209184 -13795472 + PROTOP DNA P 1 680 -3800 9 701 2755 191 34 30 chrUextra 15209284 15209999 -13794657 + SAR_DM Satellite Satellite 1 717 -219 9 701 6150 1 0 1 chrUextra 15210099 15210814 -13793842 + ROO_I LTR Pao 5137 5850 -2406 9 701 2125 138 124 11 chrUextra 15211015 15211629 -13793027 - DOC4_DM LINE Jockey 0 2791 2344 9 701 5614 41 10 1 chrUextra 15211729 15212443 -13792213 + Baggins1 LINE LOA 1300 2019 -3434 9 701 5441 38 22 1 chrUextra 15212544 15213254 -13791402 - R1_DM LINE R1 -4003 1353 629 9 701 5988 1 1 0 chrUextra 15213359 15214074 -13790582 - ROO_I LTR Pao -1280 6976 6261 9 701 6242 0 1 1 chrUextra 15214174 15214889 -13789767 + LSU-rRNA_Dme rRNA rRNA 3010 3724 -176 9 701 5778 0 1 1 chrUextra 15215041 15215704 -13788952 - LSU-rRNA_Dme rRNA rRNA 0 3900 3238 9 701 261 103 14 29 chrUextra 15216276 15216346 -13788310 + (TAAAAA)n Simple_repeat Simple_repeat 4 72 0 9 701 1524 0 5 0 chrUextra 15216619 15216803 -13787853 + ALUII_DM Unknown Unknown 56 240 0 9 701 6257 4 0 0 chrUextra 15217434 15218149 -13786507 + Copia2_I LTR Copia 3031 3745 -417 9 701 2319 113 47 25 chrUextra 15218278 15218964 -13785692 + DMSAT6 Satellite Satellite 1 700 0 9 701 3229 70 64 1 chrUextra 15219106 15219778 -13784878 - PROTOP_A DNA P 0 1105 528 9 701 5857 4 49 0 chrUextra 15220692 15221406 -13783250 - STALKER4_I LTR Gypsy -4183 2347 1599 9 701 6131 3 0 3 chrUextra 15221506 15222220 -13782436 - LSU-rRNA_Dme rRNA rRNA -954 2946 2235 9 701 2786 187 24 31 chrUextra 15222321 15223034 -13781622 - SAR_DM Satellite Satellite -1042 707 1 9 701 5650 11 53 0 chrUextra 15223134 15223848 -13780808 - QUASIMODO_I LTR Gypsy -2566 3494 2743 9 701 3343 91 0 0 chrUextra 15223948 15224410 -13780246 + HMSBEAGLE_I LTR Gypsy 1358 1819 -4710 9 701 554 184 0 0 chrUextra 15224400 15224509 -13780147 + HMSBEAGLE_I LTR Gypsy 2346 2454 -4075 9 701 752 172 28 0 chrUextra 15224513 15224658 -13779998 + HMSBEAGLE_I LTR Gypsy 2422 2570 -3959 9 701 2812 191 47 13 chrUextra 15224762 15225476 -13779180 + SAR_DM Satellite Satellite 1 737 -208 9 701 6198 0 3 1 chrUextra 15225576 15226290 -13778366 - SSU-rRNA_Dme rRNA rRNA -70 1925 1211 9 701 5225 41 70 1 chrUextra 15226390 15227104 -13777552 - ROO_I LTR Pao -5387 2869 2107 9 701 2111 4 0 4 chrUextra 15227204 15227452 -13777204 - SSU-rRNA_Dme rRNA rRNA -1748 247 1 9 701 32 0 0 0 chrUextra 15227584 15227616 -13777040 + AT_rich Low_complexity Low_complexity 1 32 0 9 701 1768 24 0 0 chrUextra 15228018 15228231 -13776425 + QUASIMODO_LTR LTR Gypsy 395 607 -51 9 701 3418 63 28 4 chrUextra 15228238 15228732 -13775924 + QUASIMODO_I LTR Gypsy 30 535 -5525 9 701 2817 197 14 21 chrUextra 15228836 15229546 -13775110 - SAR_DM Satellite Satellite -620 705 1 9 701 6152 6 0 0 chrUextra 15229646 15230360 -13774296 + FW_DM LINE Jockey 3632 4345 -347 9 701 1817 153 39 26 chrUextra 15230460 15230843 -13773813 - STALKER4_I LTR Gypsy -5795 735 235 9 701 31 58 0 0 chrUextra 15230844 15230896 -13773760 + AT_rich Low_complexity Low_complexity 1 52 0 9 701 1057 101 4 33 chrUextra 15230984 15231174 -13773482 - STALKER4_LTR LTR Gypsy -3 399 227 9 701 801 27 0 111 chrUextra 15231274 15231400 -13773256 + Baggins1 LINE LOA 5342 5453 0 9 701 1030 63 7 0 chrUextra 15231845 15231988 -13772668 + Baggins1 LINE LOA 4791 4934 -519 9 701 2067 185 54 26 chrUextra 15232091 15232801 -13771855 + SAR_DM Satellite Satellite 1 729 -202 9 701 1102 14 0 7 chrUextra 15232903 15233046 -13771610 + Copia_LTR LTR Copia 135 276 0 9 701 1859 276 4 4 chrUextra 15233046 15233609 -13771047 - HMSBEAGLE_I LTR Gypsy -2703 3826 3264 9 701 5985 8 1 1 chrUextra 15233716 15234430 -13770226 - R1_DM LINE R1 -1422 3934 3221 9 701 6132 1 0 0 chrUextra 15234530 15235244 -13769412 - FW_DM LINE Jockey -3976 716 3 9 701 5923 8 0 0 chrUextra 15235344 15236058 -13768598 + STALKER4_I LTR Gypsy 2529 3242 -3288 9 701 1031 0 0 0 chrUextra 15236158 15236285 -13768371 + Copia_LTR LTR Copia 150 276 0 9 701 232 0 0 0 chrUextra 15236285 15236319 -13768337 + Copia_LTR LTR Copia 243 276 0 9 701 4783 0 2 0 chrUextra 15236319 15236872 -13767784 + Copia_I LTR Copia 1 554 -4039 9 701 1842 65 31 3 chrUextra 15237000 15237291 -13767365 - I_DM LINE I -5834 397 99 9 701 2263 86 35 3 chrUextra 15237346 15237686 -13766970 + Baggins1 LINE LOA 4205 4555 -898 9 701 5692 20 0 15 chrUextra 15237786 15238498 -13766158 - CIRCE LINE Composite -1662 4694 3994 9 701 3560 5 0 0 chrUextra 15238600 15239013 -13765643 + LSU-rRNA_Dme rRNA rRNA 2169 2581 -1319 9 701 2436 3 0 3 chrUextra 15239031 15239314 -13765342 + R2_DM LINE R2 1 282 -3325 9 701 828 92 0 0 chrUextra 15239414 15239544 -13765112 - ARS406_DM Unknown Unknown -223 130 1 9 701 2963 172 9 10 chrUextra 15239451 15240128 -13764528 + SAR_DM Satellite Satellite 195 870 -602 9 701 1394 18 0 0 chrUextra 15240228 15240393 -13764263 + R1_DM LINE R1 5192 5356 0 9 701 4758 4 2 0 chrUextra 15240391 15240941 -13763715 + LSU-rRNA_Dme rRNA rRNA 2640 3190 -710 9 701 2529 7 0 0 chrUextra 15241042 15241337 -13763319 + R1_DM LINE R1 4619 4913 -443 9 701 3693 0 0 0 chrUextra 15241335 15241756 -13762900 - LSU-rRNA_Dme rRNA rRNA -1245 2655 2235 9 701 21 89 0 0 chrUextra 15242470 15242526 -13762130 + AT_rich Low_complexity Low_complexity 1 56 0 9 701 5634 20 1 6 chrUextra 15242670 15243384 -13761272 - CIRCE LINE Composite -1483 4873 4163 9 701 5811 20 10 1 chrUextra 15243484 15244198 -13760458 - IVK_DM LINE I -2745 2657 1938 9 701 601 0 0 0 chrUextra 15244298 15244369 -13760287 + R2_DM LINE R2 3528 3598 -9 9 701 5570 5 1 1 chrUextra 15244365 15245012 -13759644 + LSU-rRNA_Dme rRNA rRNA 2578 3224 -676 9 701 6073 3 0 1 chrUextra 15245112 15245826 -13758830 - FW_DM LINE Jockey -1517 3175 2463 9 701 2694 200 51 29 chrUextra 15246744 15247448 -13757208 + SAR_DM Satellite Satellite 1 719 -396 9 701 502 269 72 9 chrUextra 15247723 15247944 -13756712 - MICROPIA_I LTR Gypsy -886 3590 3356 9 701 503 297 21 13 chrUextra 15248026 15248265 -13756391 + Gypsy10_I LTR Gypsy 2223 2463 -2815 9 701 2366 7 0 4 chrUextra 15248368 15248645 -13756011 + R1_DM LINE R1 5081 5356 0 9 701 3803 2 0 0 chrUextra 15248643 15249082 -13755574 + LSU-rRNA_Dme rRNA rRNA 2640 3078 -822 9 701 3985 25 8 13 chrUextra 15249182 15249708 -13754948 - BATUMI_I LTR Pao -1014 6949 6427 9 701 1179 36 6 0 chrUextra 15249731 15249896 -13754760 + BATUMI_I LTR Pao 7303 7468 -495 9 701 2871 3 0 0 chrUextra 15249996 15250326 -13754330 - DMRT1B LINE R1 -4853 330 1 9 701 1512 0 0 0 chrUextra 15250542 15250710 -13753946 + (TTGTG)n Simple_repeat Simple_repeat 1 168 0 9 701 5787 32 0 0 chrUextra 15250810 15251524 -13753132 - R1_DM LINE R1 -2676 2680 1967 9 701 5578 30 3 0 chrUextra 15251624 15252319 -13752337 - R1_DM LINE R1 -2101 3255 2559 9 701 3096 164 17 16 chrUextra 15252438 15253134 -13751522 + SAR_DM Satellite Satellite 380 1076 -396 9 701 322 178 50 101 chrUextra 15253777 15253896 -13750760 - Copia_I LTR Copia -80 4513 4401 9 701 1431 0 0 0 chrUextra 15254066 15254225 -13750431 + (TATAA)n Simple_repeat Simple_repeat 5 163 0 9 701 2667 39 0 0 chrUextra 15254225 15254561 -13750095 + DM1731_LTR LTR Copia 1 336 0 9 701 1837 0 9 0 chrUextra 15254561 15254780 -13749876 + DM1731_I LTR Copia 1 221 -3755 9 701 6102 7 1 0 chrUextra 15254880 15255594 -13749062 - DOC LINE Jockey -993 3732 3018 9 701 5926 11 7 1 chrUextra 15255694 15256408 -13748248 - G_DM LINE Jockey -1158 3188 2471 9 701 5173 28 84 0 chrUextra 15256508 15257222 -13747434 - R1_DM LINE R1 -370 4986 4213 9 701 5493 3 0 0 chrUextra 15258136 15258765 -13745891 - Invader4_I LTR Gypsy -1784 629 1 9 701 748 0 0 0 chrUextra 15258765 15258850 -13745806 - Invader4_LTR LTR Gypsy 0 346 262 9 701 5382 29 3 1 chrUextra 15258950 15259664 -13744992 + IDEFIX_I LTR Gypsy 4580 5294 -334 9 701 2952 184 9 9 chrUextra 15259765 15260462 -13744194 - SAR_DM Satellite Satellite -577 895 199 9 701 622 105 9 0 chrUextra 15260373 15260478 -13744178 + ARS406_DM Unknown Unknown 1 106 -247 9 701 1012 16 0 0 chrUextra 15260578 15260703 -13743953 - Copia2_LTR_DM LTR Copia -73 125 1 9 701 3965 41 73 15 chrUextra 15260703 15261292 -13743364 - QUASIMODO_I LTR Gypsy -1032 5028 4406 9 701 3511 2 0 32 chrUextra 15261392 15261833 -13742823 - ROO_I LTR Pao -7829 427 1 9 701 2412 0 0 0 chrUextra 15261833 15262106 -13742550 - ROO_LTR LTR Pao 0 428 156 9 701 693 11 23 0 chrUextra 15262206 15262293 -13742363 + PROTOP_B DNA P 1067 1153 0 9 701 2507 88 81 118 chrUextra 15262293 15262920 -13741736 + PROTOP_B DNA P 420 1023 -130 9 701 3658 188 4 0 chrUextra 15263021 15263734 -13740922 + ROVER-I_DM LTR Gypsy 3965 4680 -1904 9 701 387 0 0 0 chrUextra 15264505 15264548 -13740108 + (GAGAA)n Simple_repeat Simple_repeat 4 46 0 9 701 364 125 16 74 chrUextra 15264650 15264771 -13739885 + BATUMI_I LTR Pao 656 769 -7194 9 701 2672 111 18 63 chrUextra 15264803 15265362 -13739294 + BATUMI_I LTR Pao 751 1284 -6679 9 701 4194 70 33 3 chrUextra 15265464 15266067 -13738589 - R1_DM LINE R1 -4735 621 1 9 701 628 26 0 0 chrUextra 15266100 15266176 -13738480 - R1_DM LINE R1 0 5356 5281 9 701 3102 167 13 10 chrUextra 15267090 15267786 -13736870 + SAR_DM Satellite Satellite 379 1076 -396 9 701 3163 176 8 7 chrUextra 15267904 15268614 -13736042 + SAR_DM Satellite Satellite 284 994 -478 9 701 6304 0 0 0 chrUextra 15268718 15269432 -13735224 + BEL_I LTR Pao 2537 3250 -2154 9 701 2334 0 0 7 chrUextra 15269969 15270246 -13734410 - QUASIMODO_LTR LTR Gypsy 0 658 384 9 701 2240 0 0 4 chrUextra 15270346 15270620 -13734036 + Copia_LTR LTR Copia 4 276 0 9 701 4893 62 32 8 chrUextra 15271160 15271874 -13732782 - MDG1_I LTR Gypsy -5586 1010 280 9 701 3101 24 0 0 chrUextra 15271974 15272354 -13732302 + Invader3_I LTR Gypsy 3284 3663 -1225 9 701 2850 0 0 15 chrUextra 15272354 15272688 -13731968 - HOBO DNA hAT 0 3016 2688 9 701 6187 6 1 0 chrUextra 15272788 15273502 -13731154 + Copia2_I LTR Copia 3248 3962 -200 9 701 2478 181 46 11 chrUextra 15273602 15274316 -13730340 - SAR_DM Satellite Satellite -264 1208 224 9 701 219 114 0 0 chrUextra 15274811 15274846 -13729810 + (TC)n Simple_repeat Simple_repeat 1 35 0 9 701 733 235 51 40 chrUextra 15275237 15275512 -13729144 + Copia_I LTR Copia 4050 4327 -266 9 701 34 24 0 0 chrUextra 15275598 15275639 -13729017 + AT_rich Low_complexity Low_complexity 1 41 0 9 701 28 48 0 0 chrUextra 15277162 15277204 -13727452 + AT_rich Low_complexity Low_complexity 1 42 0 9 701 32 0 0 0 chrUextra 15277534 15277566 -13727090 + AT_rich Low_complexity Low_complexity 1 32 0 9 701 28 48 0 0 chrUextra 15278011 15278053 -13726603 + AT_rich Low_complexity Low_complexity 1 42 0 9 701 359 115 49 0 chrUextra 15278325 15278386 -13726270 - NTS_DM Other Other -150 90 27 9 701 434 0 0 0 chrUextra 15278486 15278536 -13726120 - ROO_I LTR Pao -8206 50 1 9 701 3766 0 0 0 chrUextra 15278536 15278964 -13725692 - ROO_LTR LTR Pao 0 428 1 9 701 1526 52 115 17 chrUextra 15278965 15279200 -13725456 + QUASIMODO_I LTR Gypsy 4563 4820 -1240 9 701 5944 4 4 1 chrUextra 15279300 15280014 -13724642 + ACCORD_I LTR Gypsy 60 775 -5513 9 701 382 109 18 82 chrUextra 15280145 15280255 -13724401 + BATUMI_I LTR Pao 667 769 -7194 9 701 2580 116 19 47 chrUextra 15280296 15280828 -13723828 + BATUMI_I LTR Pao 749 1265 -6698 9 701 6051 10 0 0 chrUextra 15280928 15281642 -13723014 - BLOOD_I LTR Gypsy -1735 4878 4165 9 701 6159 1 0 3 chrUextra 15281742 15282456 -13722200 - LSU-rRNA_Dme rRNA rRNA -1105 2795 2084 9 701 6162 1 1 0 chrUextra 15282556 15283270 -13721386 + DMRT1B LINE R1 4441 5155 -28 9 701 587 0 14 0 chrUextra 15283370 15283440 -13721216 - SSU-rRNA_Dme rRNA rRNA -1924 71 1 9 701 32 0 0 0 chrUextra 15283572 15283604 -13721052 + AT_rich Low_complexity Low_complexity 1 32 0 9 701 28 48 0 0 chrUextra 15283932 15283974 -13720682 + AT_rich Low_complexity Low_complexity 1 42 0 9 701 1398 159 4 7 chrUextra 15284184 15284463 -13720193 + SAR_DM Satellite Satellite 626 903 -569 9 701 1804 185 19 7 chrUextra 15284478 15284898 -13719758 + SAR_DM Satellite Satellite 496 920 -552 9 701 6054 8 0 0 chrUextra 15284998 15285712 -13718944 + Invader3_I LTR Gypsy 2204 2917 -1971 9 701 6014 1 1 3 chrUextra 15285812 15286526 -13718130 - R1_DM LINE R1 -3712 1644 932 9 701 1155 56 0 0 chrUextra 15286626 15286786 -13717870 + (TTATA)n Simple_repeat Simple_repeat 2 161 0 9 701 406 318 14 14 chrUextra 15287117 15287337 -13717319 + Copia2_I LTR Copia 140 359 -3803 9 701 4862 11 3 0 chrUextra 15287440 15288014 -13716642 - R1_DM LINE R1 -4780 576 1 9 701 1233 0 0 0 chrUextra 15288014 15288154 -13716502 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2493 9 701 2149 172 9 9 chrUextra 15288270 15288951 -13715705 + SAR_DM Satellite Satellite 1 681 -677 9 701 2327 98 4 40 chrUextra 15289085 15289782 -13714874 + DMSAT6 Satellite Satellite 1 672 0 9 701 2277 15 0 0 chrUextra 15289882 15290150 -13714506 - Invader6_I LTR Gypsy -3831 268 1 9 701 3351 18 0 0 chrUextra 15290150 15290543 -13714113 - Invader6_LTR LTR Gypsy 0 393 1 9 701 467 0 0 0 chrUextra 15290543 15290596 -13714060 - Invader6_I LTR Gypsy 0 4099 4047 9 701 254 0 0 0 chrUextra 15290696 15290726 -13713930 - DIVER_LTR LTR Pao -194 30 1 9 701 5694 26 0 0 chrUextra 15290726 15291410 -13713246 - DIVER_I LTR Pao 0 5643 4960 9 701 1513 185 7 0 chrUextra 15292330 15292638 -13712018 - Gypsy12A_LTR LTR Gypsy -1970 310 1 9 701 431 325 136 8 chrUextra 15292655 15292891 -13711765 + Ulysses_I LTR Gypsy 5202 5467 -914 9 701 1107 107 0 0 chrUextra 15293138 15293316 -13711340 + (GAGAA)n Simple_repeat Simple_repeat 1 178 0 9 701 6062 1 0 1 chrUextra 15293969 15294666 -13709990 - LSU-rRNA_Dme rRNA rRNA -1245 2655 1960 9 701 1492 28 27 18 chrUextra 15294766 15294986 -13709670 + NTS_DM Other Other 19 240 0 9 701 1756 17 17 17 chrUextra 15294986 15295226 -13709430 + NTS_DM Other Other 1 240 0 9 701 1850 4 17 13 chrUextra 15295226 15295465 -13709191 + NTS_DM Other Other 1 240 0 9 701 6220 1 1 0 chrUextra 15295580 15296294 -13708362 - DOC LINE Jockey -408 4317 3603 9 701 1058 93 7 0 chrUextra 15296394 15296545 -13708111 + DMCR1A LINE CR1 3369 3520 -950 9 701 4189 56 16 3 chrUextra 15296538 15297108 -13707548 + DMCR1A LINE CR1 3655 4231 -239 9 701 6185 0 1 0 chrUextra 15297208 15297922 -13706734 + DOC LINE Jockey 59 773 -3952 9 701 3770 91 5 18 chrUextra 15298082 15298679 -13705977 - DM297_I LTR Gypsy -3400 2767 2179 9 701 375 20 0 0 chrUextra 15298687 15298736 -13705920 - BS3_DM LINE Jockey -244 1546 1498 9 701 6128 1 3 3 chrUextra 15298836 15299550 -13705106 - SSU-rRNA_Dme rRNA rRNA -219 1776 1063 9 701 479 341 11 11 chrUextra 15299651 15300004 -13704652 - MICROPIA_I LTR Gypsy -3217 1259 907 9 701 5853 28 0 0 chrUextra 15300464 15301178 -13703478 + R1_DM LINE R1 2652 3365 -1991 9 701 2845 68 5 17 chrUextra 15301375 15301781 -13702875 - Baggins1 LINE LOA -262 5191 4791 9 701 1844 192 40 6 chrUextra 15302092 15302806 -13701850 + SAR_DM Satellite Satellite 1 738 -396 9 701 1117 219 247 26 chrUextra 15303041 15303547 -13701109 + TAHRE LINE telomeric 9659 10276 -187 9 701 34 24 0 0 chrUextra 15303556 15303597 -13701059 + AT_rich Low_complexity Low_complexity 1 41 0 9 701 3067 47 15 28 chrUextra 15303720 15304434 -13700222 + PROTOP_A DNA P 221 771 -334 9 701 5964 3 1 3 chrUextra 15304535 15305248 -13699408 - R1_DM LINE R1 -3744 1612 901 9 701 3020 183 10 10 chrUextra 15305348 15306050 -13698606 - SAR_DM Satellite Satellite -489 983 282 9 701 3604 20 2 0 chrUextra 15306162 15306602 -13698054 - FW_DM LINE Jockey -2502 2190 1750 9 701 1793 39 106 26 chrUextra 15306611 15306876 -13697780 + ROO_I LTR Pao 4193 4478 -3778 9 701 6155 3 0 0 chrUextra 15306976 15307690 -13696966 + DM1731_I LTR Copia 2032 2745 -1231 9 701 855 143 357 28 chrUextra 15308013 15308315 -13696341 - DNAREP1_DM LINE Penelope -2 592 193 9 701 322 200 90 0 chrUextra 15308352 15308452 -13696204 - DNAREP1_DM LINE Penelope -485 109 1 9 701 6024 0 4 0 chrUextra 15308604 15309318 -13695338 + ROO_I LTR Pao 2551 3267 -4989 9 701 6214 0 0 1 chrUextra 15309421 15310132 -13694524 + SSU-rRNA_Dme rRNA rRNA 347 1056 -939 9 701 3150 162 14 16 chrUextra 15310232 15310939 -13693717 + SAR_DM Satellite Satellite 253 958 -514 9 701 5764 14 4 0 chrUextra 15311046 15311760 -13692896 + ROO_I LTR Pao 3382 4098 -4158 9 701 5873 22 0 0 chrUextra 15311860 15312574 -13692082 + FW_DM LINE Jockey 3009 3722 -970 9 701 2864 191 16 22 chrUextra 15312677 15313388 -13691268 + SAR_DM Satellite Satellite 1 706 -208 9 701 3003 110 3 3 chrUextra 15313489 15314021 -13690635 - Invader6_I LTR Gypsy -572 3527 3163 9 701 1345 35 6 0 chrUextra 15314028 15314202 -13690454 - Invader6_I LTR Gypsy -1806 2293 2119 9 701 938 292 31 25 chrUextra 15314335 15314853 -13689803 + Copia2_I LTR Copia 1550 2116 -2477 9 701 28 0 0 0 chrUextra 15314914 15314942 -13689714 + AT_rich Low_complexity Low_complexity 1 28 0 9 701 5817 11 0 0 chrUextra 15315116 15315830 -13688826 + STALKER4_I LTR Gypsy 2989 3702 -2828 9 701 2983 160 34 17 chrUextra 15316749 15317450 -13687206 + SAR_DM Satellite Satellite 246 958 -514 9 701 5285 48 0 13 chrUextra 15317558 15318272 -13686384 - R1_DM LINE R1 -4343 1013 309 9 701 3854 15 0 0 chrUextra 15318372 15318834 -13685822 - PROTOP_A DNA P -643 462 1 9 701 47 0 0 0 chrUextra 15319327 15319374 -13685282 + AT_rich Low_complexity Low_complexity 1 47 0 9 701 680 24 0 0 chrUextra 15319818 15319900 -13684756 - STALKER4_LTR LTR Gypsy -190 212 131 9 701 6212 1 0 0 chrUextra 15320000 15320714 -13683942 + STALKER4_I LTR Gypsy 3687 4400 -2130 9 701 5165 52 14 8 chrUextra 15320814 15321528 -13683128 + R1_DM LINE R1 415 1132 -4224 9 701 5334 2 0 0 chrUextra 15321628 15322234 -13682422 - SSU-rRNA_Dme rRNA rRNA -1389 606 1 9 701 5565 18 0 1 chrUextra 15322442 15323156 -13681500 + QUASIMODO_I LTR Gypsy 3267 3979 -2081 9 701 3300 119 64 32 chrUextra 15323256 15323970 -13680686 + STALKER4_I LTR Gypsy 535 1271 -5259 9 701 3502 38 11 0 chrUextra 15324070 15324514 -13680142 - PROTOP DNA P -4031 449 1 9 701 2958 171 16 21 chrUextra 15324885 15325594 -13679062 + SAR_DM Satellite Satellite 191 895 -577 9 701 251 290 107 89 chrUextra 15325981 15326261 -13678395 - Invader1_LTR LTR Gypsy -55 368 84 9 701 4370 23 0 54 chrUextra 15327326 15327918 -13676738 - CIRCE LINE Composite -4492 1864 1305 9 701 496 327 25 25 chrUextra 15327761 15328040 -13676616 - Gypsy12_I LTR Gypsy -2177 3369 3091 9 701 29 0 0 0 chrUextra 15328316 15328345 -13676311 + AT_rich Low_complexity Low_complexity 1 29 0 9 701 5966 17 0 1 chrUextra 15328954 15329668 -13674988 - R1_DM LINE R1 -799 4557 3845 9 701 1591 171 3 6 chrUextra 15330587 15330923 -13673733 + SAR_DM Satellite Satellite 569 903 -569 9 701 1585 177 17 6 chrUextra 15330938 15331296 -13673360 + SAR_DM Satellite Satellite 496 857 -615 9 701 246 150 0 0 chrUextra 15331455 15331495 -13673161 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 701 22 56 0 0 chrUextra 15331500 15331536 -13673120 + AT_rich Low_complexity Low_complexity 1 36 0 9 701 4383 0 2 0 chrUextra 15331609 15332110 -13672546 - LSU-rRNA_Dme rRNA rRNA 0 3900 3399 9 701 21 89 0 0 chrUextra 15332477 15332533 -13672123 + AT_rich Low_complexity Low_complexity 1 56 0 9 701 3203 3 3 3 chrUextra 15332552 15332924 -13671732 - SSU-rRNA_Dme rRNA rRNA 0 1995 1624 9 701 3042 171 15 20 chrUextra 15333024 15333738 -13670918 + SAR_DM Satellite Satellite 256 966 -506 9 701 6114 0 3 4 chrUextra 15333838 15334552 -13670104 - SSU-rRNA_Dme rRNA rRNA -168 1827 1115 9 701 6237 3 0 0 chrUextra 15334652 15335366 -13669290 - Invader3_I LTR Gypsy -3297 1591 878 9 702 572 195 25 55 chrUextra 15335468 15335631 -13669025 - DMCR1A LINE CR1 -2187 2283 2126 9 702 6091 0 0 0 chrUextra 15336280 15336994 -13667662 + STALKER4_I LTR Gypsy 5078 5791 -739 9 702 335 296 19 19 chrUextra 15337509 15337671 -13666985 - MDG3_I LTR Gypsy -1562 3424 3263 9 702 2787 204 17 22 chrUextra 15337908 15338622 -13666034 + SAR_DM Satellite Satellite 1 710 -227 9 702 21 89 0 0 chrUextra 15338750 15338806 -13665850 + AT_rich Low_complexity Low_complexity 1 56 0 9 702 5329 2 2 0 chrUextra 15338825 15339436 -13665220 - SSU-rRNA_Dme rRNA rRNA 0 1995 1384 9 702 5375 31 78 0 chrUextra 15339536 15340250 -13664406 + R1_DM LINE R1 4385 5154 -202 9 702 1677 10 0 0 chrUextra 15340350 15340553 -13664103 - IDEFIX_LTR LTR Gypsy -391 203 1 9 702 2559 61 0 0 chrUextra 15340553 15340910 -13663746 - IDEFIX_I LTR Gypsy -1443 4185 3829 9 702 5581 12 1 4 chrUextra 15341189 15341878 -13662778 + LSU-rRNA_Dme rRNA rRNA 218 904 -2996 9 702 5649 1 0 36 chrUextra 15341978 15342692 -13661964 + LSU-rRNA_Dme rRNA rRNA 8 695 -3205 9 702 3789 5 0 0 chrUextra 15342792 15343227 -13661429 - R2_DM LINE R2 -916 2691 2257 9 702 2458 0 0 0 chrUextra 15343225 15343506 -13661150 - LSU-rRNA_Dme rRNA rRNA -1323 2577 2297 9 702 5727 4 59 0 chrUextra 15343606 15344320 -13660336 + FW_DM LINE Jockey 2574 3329 -1363 9 702 805 48 0 0 chrUextra 15344420 15344523 -13660133 + BATUMI_I LTR Pao 4141 4243 -3720 9 702 4888 45 0 8 chrUextra 15344510 15345134 -13659522 + BATUMI_I LTR Pao 4441 5059 -2904 9 702 34 24 0 0 chrUextra 15345794 15345835 -13658821 + AT_rich Low_complexity Low_complexity 1 41 0 9 702 3490 196 4 1 chrUextra 15346051 15346762 -13657894 + ROVER-I_DM LTR Gypsy 3914 4626 -1958 9 702 3023 152 5 5 chrUextra 15346870 15347576 -13657080 - BATUMI_I LTR Pao -3197 4717 3935 9 702 5870 32 0 0 chrUextra 15347676 15348390 -13656266 - CIRCE LINE Composite -197 6159 5446 9 702 6132 1 1 0 chrUextra 15348490 15349204 -13655452 + R1_DM LINE R1 1332 2046 -3310 9 702 4937 43 4 49 chrUextra 15349304 15350018 -13654638 - BATUMI_I LTR Pao -5247 2716 2035 9 702 3139 172 11 8 chrUextra 15350119 15350832 -13653824 - SAR_DM Satellite Satellite -416 1056 342 9 702 361 165 11 32 chrUextra 15350932 15351026 -13653630 + XDMR_DM Unknown Unknown 260 351 -9 9 702 2748 176 21 24 chrUextra 15350949 15351646 -13653010 - SAR_DM Satellite Satellite -353 1119 425 9 702 5983 10 0 0 chrUextra 15351746 15352460 -13652196 + STALKER4_I LTR Gypsy 2018 2731 -3799 9 702 902 118 6 12 chrUextra 15352560 15352723 -13651933 + SAR_DM Satellite Satellite 742 903 -569 9 702 2290 181 15 11 chrUextra 15352738 15353274 -13651382 + SAR_DM Satellite Satellite 496 1033 -439 9 702 6090 6 0 1 chrUextra 15353376 15354088 -13650568 - DMRT1B LINE R1 -39 5144 4434 9 702 288 0 0 0 chrUextra 15354188 15354227 -13650429 + NTS_DM Other Other 95 133 -107 9 702 1252 18 0 6 chrUextra 15354227 15354392 -13650264 + NTS_DM Other Other 38 201 -39 9 702 21 57 0 0 chrUextra 15354392 15354427 -13650229 + AT_rich Low_complexity Low_complexity 1 35 0 9 702 832 9 9 27 chrUextra 15354453 15354564 -13650092 + NTS_DM Other Other 25 133 -107 9 702 817 0 0 0 chrUextra 15354564 15354660 -13649996 + NTS_DM Other Other 38 133 -107 9 702 1387 25 20 20 chrUextra 15354660 15354863 -13649793 + NTS_DM Other Other 38 240 0 9 702 324 26 0 0 chrUextra 15354863 15354902 -13649754 + NTS_DM Other Other 1 39 -201 9 702 5070 27 126 1 chrUextra 15355816 15356530 -13648126 - IDEFIX_I LTR Gypsy -4417 1211 409 9 702 2458 98 1 41 chrUextra 15356631 15357344 -13647312 + DMSAT6 Satellite Satellite 1 684 -92 9 702 5918 10 0 1 chrUextra 15357444 15358158 -13646498 + STALKER4_I LTR Gypsy 2137 2849 -3681 9 702 5770 8 0 1 chrUextra 15358258 15358972 -13645684 + IDEFIX_I LTR Gypsy 4137 4849 -779 9 702 6056 10 0 1 chrUextra 15359072 15359786 -13644870 + STALKER4_I LTR Gypsy 4004 4716 -1814 9 702 5741 22 22 1 chrUextra 15359886 15360600 -13644056 + R1_DM LINE R1 3156 3884 -1472 9 702 1599 20 0 5 chrUextra 15360700 15360905 -13643751 - NTS_DM Other Other -36 204 1 9 702 1734 21 17 17 chrUextra 15360905 15361145 -13643511 - NTS_DM Other Other 0 240 1 9 702 1731 21 17 17 chrUextra 15361145 15361385 -13643271 - NTS_DM Other Other 0 240 1 9 702 6128 3 0 0 chrUextra 15361514 15362227 -13642429 + R1_DM LINE R1 2219 2931 -2425 9 702 1389 0 0 0 chrUextra 15362328 15362494 -13642162 - NTS_DM Other Other -74 166 1 9 702 1861 0 17 13 chrUextra 15362494 15362733 -13641923 - NTS_DM Other Other 0 240 1 9 702 1850 4 17 13 chrUextra 15362733 15362972 -13641684 - NTS_DM Other Other 0 240 1 9 702 383 0 0 0 chrUextra 15362992 15363040 -13641616 + Copia_LTR LTR Copia 1 48 -228 9 702 1006 183 42 3 chrUextra 15363140 15363847 -13640809 - SAR_DM Satellite Satellite -837 734 1 9 702 5256 53 3 8 chrUextra 15363953 15364662 -13639994 + BATUMI_I LTR Pao 3262 3966 -3997 9 702 6037 7 0 0 chrUextra 15364766 15365479 -13639177 + Gypsy4_I LTR Gypsy 5060 5772 -516 9 702 5745 21 3 1 chrUextra 15365579 15366292 -13638364 + R1_DM LINE R1 3403 4116 -1240 9 702 5927 7 18 0 chrUextra 15366392 15367105 -13637551 - STALKER4_I LTR Gypsy -608 5922 5197 9 702 210 37 0 0 chrUextra 15367301 15367328 -13637328 + (GA)n Simple_repeat Simple_repeat 2 28 0 9 702 491 208 8 16 chrUextra 15367328 15367450 -13637206 + HETRP_DM Satellite Satellite 1549 1669 -203 9 702 655 186 7 14 chrUextra 15367615 15367757 -13636899 + HETRP_DM Satellite Satellite 1529 1669 -203 9 702 204 67 0 0 chrUextra 15367888 15367918 -13636738 + (GA)n Simple_repeat Simple_repeat 2 31 0 9 702 2603 166 22 10 chrUextra 15368018 15368731 -13635925 + SAR_DM Satellite Satellite 326 1215 -257 9 702 6092 4 1 0 chrUextra 15368831 15369544 -13635112 + R1_DM LINE R1 2041 2754 -2602 9 702 4828 20 2 2 chrUextra 15369644 15370233 -13634423 - R1_DM LINE R1 -1293 4063 3475 9 702 1020 24 8 0 chrUextra 15370231 15370357 -13634299 - R1_DM LINE R1 -712 4644 4518 9 702 5915 3 1 0 chrUextra 15370457 15371170 -13633486 + QUASIMODO_I LTR Gypsy 3692 4405 -1655 9 702 5646 31 0 0 chrUextra 15371270 15371983 -13632673 + MDG1_I LTR Gypsy 3134 3846 -2750 9 702 5835 30 0 0 chrUextra 15372084 15372795 -13631861 + R1_DM LINE R1 2793 3503 -1853 9 702 246 150 0 0 chrUextra 15372902 15372942 -13631714 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 702 22 56 0 0 chrUextra 15372947 15372983 -13631673 + AT_rich Low_complexity Low_complexity 1 36 0 9 702 4832 2 2 0 chrUextra 15373055 15373609 -13631047 - LSU-rRNA_Dme rRNA rRNA 0 3900 3346 9 702 5978 6 0 0 chrUextra 15373709 15374422 -13630234 - ROO_I LTR Pao -3336 4920 4208 9 702 5246 46 3 11 chrUextra 15374529 15375235 -13629421 + BATUMI_I LTR Pao 3047 3746 -4217 9 702 5772 18 22 1 chrUextra 15375336 15376046 -13628610 + Gypsy4_I LTR Gypsy 408 1132 -5156 9 702 6297 0 0 0 chrUextra 15376148 15376861 -13627795 + R2_DM LINE R2 1421 2133 -1474 9 702 805 300 41 42 chrUextra 15376963 15377609 -13627047 + BLOOD_I LTR Gypsy 1919 2583 -4013 9 702 5069 10 0 3 chrUextra 15377774 15378388 -13626268 + TART LINE telomeric 13865 14476 -1 9 702 275 202 30 50 chrUextra 15378388 15378487 -13626169 + TART LINE telomeric 3623 3719 -10758 9 702 336 0 0 0 chrUextra 15378587 15378632 -13626024 + NTS_DM Other Other 89 133 -107 9 702 817 0 0 0 chrUextra 15378632 15378728 -13625928 + NTS_DM Other Other 38 133 -107 9 702 1378 20 20 25 chrUextra 15378728 15378932 -13625724 + NTS_DM Other Other 38 240 0 9 702 1734 21 17 17 chrUextra 15378932 15379172 -13625484 + NTS_DM Other Other 1 240 0 9 702 1066 16 0 0 chrUextra 15379172 15379300 -13625356 + NTS_DM Other Other 1 128 -112 9 702 5947 14 1 1 chrUextra 15379400 15380113 -13624543 - DM1731_I LTR Copia -3057 919 207 9 702 2120 0 8 4 chrUextra 15380213 15380472 -13624184 + LSU-rRNA_Dme rRNA rRNA 1529 1788 -2112 9 702 3571 0 2 0 chrUextra 15380516 15380925 -13623731 + LSU-rRNA_Dme rRNA rRNA 1788 2197 -1703 9 702 5881 24 0 0 chrUextra 15381026 15381739 -13622917 - R1_DM LINE R1 -1598 3758 3046 9 702 1744 164 49 81 chrUextra 15381866 15382548 -13622108 + HETA LINE telomeric 1 630 -5451 9 702 6169 7 0 0 chrUextra 15382652 15383365 -13621291 + R2_DM LINE R2 2615 3327 -280 9 702 2762 180 10 23 chrUextra 15384278 15384973 -13619683 + SAR_DM Satellite Satellite 433 1118 -354 9 702 368 185 11 21 chrUextra 15384897 15384991 -13619665 - XDMR_DM Unknown Unknown -10 350 258 9 702 6168 7 0 0 chrUextra 15385091 15385804 -13618852 + DM1731_I LTR Copia 987 1699 -2277 9 702 5986 13 0 10 chrUextra 15385904 15386617 -13618039 + Gypsy2_I LTR Gypsy 4746 5451 -684 9 702 1393 165 55 25 chrUextra 15386717 15387079 -13617577 - STALKER4_I LTR Gypsy -5790 740 235 9 702 31 58 0 0 chrUextra 15387080 15387132 -13617524 + AT_rich Low_complexity Low_complexity 1 52 0 9 702 1198 62 12 0 chrUextra 15387270 15387430 -13617226 - STALKER4_LTR LTR Gypsy -23 379 218 9 702 571 90 11 0 chrUextra 15387710 15387799 -13616857 + BS3_DM LINE Jockey 1700 1789 -1 9 702 23 0 0 0 chrUextra 15387799 15387822 -13616834 + AT_rich Low_complexity Low_complexity 1 23 0 9 702 24 32 0 0 chrUextra 15387901 15387932 -13616724 + AT_rich Low_complexity Low_complexity 1 31 0 9 702 6424 3 4 0 chrUextra 15388343 15389056 -13615600 + FW_DM LINE Jockey 1394 2109 -2583 9 702 459 0 137 0 chrUextra 15389156 15389287 -13615369 + (GA)n Simple_repeat Simple_repeat 2 150 0 9 702 28 48 0 0 chrUextra 15390031 15390073 -13614583 + AT_rich Low_complexity Low_complexity 1 42 0 9 702 532 119 36 0 chrUextra 15390347 15390431 -13614225 - NTS_DM Other Other -150 90 4 9 702 1067 14 14 21 chrUextra 15390541 15390682 -13613974 - NTS_DM Other Other -78 162 23 9 702 6240 28 0 1 chrUextra 15390782 15391492 -13613164 + DIVER_I LTR Pao 1611 2319 -3324 9 702 3147 193 10 10 chrUextra 15391596 15392308 -13612348 + SAR_DM Satellite Satellite 272 983 -489 9 702 3001 183 22 22 chrUextra 15392408 15393121 -13611535 - SAR_DM Satellite Satellite -1033 713 1 9 702 3064 193 19 24 chrUextra 15393221 15393934 -13610722 + SAR_DM Satellite Satellite 1 709 -216 9 702 6621 1 1 0 chrUextra 15394034 15394747 -13609909 + DOC LINE Jockey 3667 4380 -345 9 702 6355 3 1 1 chrUextra 15394847 15395560 -13609096 - LSU-rRNA_Dme rRNA rRNA -2934 966 254 9 702 893 73 8 0 chrUextra 15395660 15395783 -13608873 + HETA LINE telomeric 5957 6080 -1 9 702 3603 154 0 0 chrUextra 15395781 15396373 -13608283 + HETA LINE telomeric 2709 3300 -2781 9 702 669 0 0 0 chrUextra 15396473 15396544 -13608112 - NTS_DM Other Other -169 71 1 9 702 1986 0 17 13 chrUextra 15396544 15396783 -13607873 - NTS_DM Other Other 0 240 1 9 702 1986 0 17 13 chrUextra 15396783 15397022 -13607634 - NTS_DM Other Other 0 240 1 9 702 1208 6 24 18 chrUextra 15397022 15397186 -13607470 - NTS_DM Other Other 0 240 76 9 702 3174 181 19 11 chrUextra 15397294 15397997 -13606659 - SAR_DM Satellite Satellite -535 937 230 9 702 6025 22 0 0 chrUextra 15398099 15398812 -13605844 + MDG3_I LTR Gypsy 1652 2364 -2622 9 702 6488 13 0 0 chrUextra 15399725 15400438 -13604218 - BATUMI_I LTR Pao -2422 5541 4829 9 702 6206 30 0 0 chrUextra 15400538 15401251 -13603405 - R1_DM LINE R1 -1966 3390 2678 9 702 3493 189 4 18 chrUextra 15401353 15402064 -13602592 - HETA LINE telomeric -2424 3657 2957 9 702 2361 281 12 10 chrUextra 15402184 15402872 -13601784 - Gypsy_I LTR Gypsy -3405 3102 2414 9 702 2147 69 95 0 chrUextra 15402990 15403294 -13601362 - TC1_DM DNA Tc1 -251 1415 1083 9 702 1438 86 43 0 chrUextra 15403262 15403472 -13601184 - TC1_DM DNA Tc1 -1447 219 1 9 702 1448 19 0 5 chrUextra 15403790 15404001 -13600655 + (TATAA)n Simple_repeat Simple_repeat 1 210 0 9 702 526 338 70 24 chrUextra 15404172 15404503 -13600153 - BLASTOPIA_I LTR Gypsy -1285 3196 2851 9 702 6640 0 0 1 chrUextra 15404604 15405316 -13599340 + LSU-rRNA_Dme rRNA rRNA 2746 3456 -444 9 702 6521 3 0 0 chrUextra 15405416 15406129 -13598527 + R1_DM LINE R1 2416 3128 -2228 9 702 251 247 49 0 chrUextra 15406324 15406405 -13598251 - ROVER-I_DM LTR Gypsy -775 5809 5725 9 702 6332 21 1 0 chrUextra 15407042 15407754 -13596902 - R1_DM LINE R1 -2755 2601 1889 9 702 6232 25 4 0 chrUextra 15407855 15408568 -13596088 - R1_DM LINE R1 -1834 3522 2807 9 702 1973 85 49 71 chrUextra 15408668 15409036 -13595620 + ROVER-LTR_DM LTR Gypsy 8 367 0 9 702 342 211 105 0 chrUextra 15409036 15409131 -13595525 + ROVER-I_DM LTR Gypsy 1 105 -6479 9 702 702 177 0 0 chrUextra 15409481 15409611 -13595045 - ARS406_DM Unknown Unknown -223 130 1 9 702 3070 181 36 14 chrUextra 15409503 15410194 -13594462 + SAR_DM Satellite Satellite 180 885 -587 9 702 6526 0 3 4 chrUextra 15410294 15411007 -13593649 + SSU-rRNA_Dme rRNA rRNA 1097 1808 -187 9 702 607 0 0 0 chrUextra 15411107 15411172 -13593484 + QUASIMODO_I LTR Gypsy 5996 6060 0 9 702 5946 3 0 0 chrUextra 15411172 15411820 -13592836 + QUASIMODO_LTR LTR Gypsy 1 648 -10 9 702 5172 112 1 0 chrUextra 15411920 15412633 -13592023 - HMSBEAGLE_I LTR Gypsy -1535 4994 4281 9 702 6450 11 1 0 chrUextra 15412733 15413446 -13591210 - G_DM LINE Jockey -2587 1759 1046 9 702 6483 8 0 0 chrUextra 15413546 15414259 -13590397 + DMRT1B LINE R1 1351 2063 -3120 9 702 4718 0 2 0 chrUextra 15414359 15414864 -13589792 + LSU-rRNA_Dme rRNA rRNA 3395 3900 0 9 702 266 196 0 19 chrUextra 15414965 15415017 -13589639 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 702 6201 20 39 0 chrUextra 15415172 15415885 -13588771 - R1_DM LINE R1 -740 4616 3876 9 702 6506 1 1 4 chrUextra 15415986 15416698 -13587958 + SSU-rRNA_Dme rRNA rRNA 653 1362 -633 9 702 277 352 95 7 chrUextra 15417132 15417427 -13587229 + BLASTOPIA_I LTR Gypsy 4160 4480 -1 9 702 333 0 0 0 chrUextra 15417611 15417648 -13587008 + (TTCTC)n Simple_repeat Simple_repeat 2 38 0 9 702 6207 21 1 3 chrUextra 15418424 15419137 -13585519 + R1_DM LINE R1 3527 4238 -1118 9 702 6168 1 0 5 chrUextra 15419237 15419907 -13584749 + R2_DM LINE R2 2932 3598 -9 9 702 414 43 0 0 chrUextra 15419903 15419950 -13584706 + LSU-rRNA_Dme rRNA rRNA 2578 2624 -1276 9 702 294 143 0 0 chrUextra 15420539 15420588 -13584068 + (GGAGAA)n Simple_repeat Simple_repeat 5 53 0 9 702 1032 70 17 17 chrUextra 15420588 15420763 -13583893 + (GAGAA)n Simple_repeat Simple_repeat 4 178 0 9 702 6392 1 0 0 chrUextra 15420863 15421576 -13583080 + STALKER4_I LTR Gypsy 3166 3878 -2652 9 702 6326 13 1 0 chrUextra 15421676 15422389 -13582267 + IVK_DM LINE I 1585 2298 -3104 9 702 6485 7 0 0 chrUextra 15422489 15423202 -13581454 + DMRT1B LINE R1 3942 4654 -529 9 702 2278 183 18 17 chrUextra 15423302 15424009 -13580647 + SAR_DM Satellite Satellite 1 707 -216 9 702 6455 8 0 1 chrUextra 15424115 15424828 -13579828 + R1_DM LINE R1 4301 5012 -344 9 702 6523 1 1 4 chrUextra 15424928 15425641 -13579015 + SSU-rRNA_Dme rRNA rRNA 956 1666 -329 9 702 3235 179 11 11 chrUextra 15425741 15426453 -13578203 - SAR_DM Satellite Satellite -594 878 167 9 702 6305 25 0 1 chrUextra 15427367 15428080 -13576576 + R2_DM LINE R2 2195 2906 -701 9 702 516 241 0 0 chrUextra 15428660 15428887 -13575769 + (TAAG)n Simple_repeat Simple_repeat 1 227 0 9 702 2582 98 14 16 chrUextra 15428999 15429703 -13574953 + DMSAT6 Satellite Satellite 1 703 0 9 702 22 35 0 0 chrUextra 15430013 15430042 -13574614 + AT_rich Low_complexity Low_complexity 1 29 0 9 702 206 194 32 0 chrUextra 15430236 15430298 -13574358 + (TTA)n Simple_repeat Simple_repeat 2 65 0 9 702 6589 0 0 0 chrUextra 15430622 15431332 -13573324 + FW_DM LINE Jockey 3466 4175 -517 9 702 1286 7 0 0 chrUextra 15431432 15431572 -13573084 - LSU-rRNA_Dme rRNA rRNA -1121 2779 2640 9 702 5275 7 0 0 chrUextra 15431570 15432145 -13572511 - R1_DM LINE R1 0 5356 4782 9 702 6571 4 0 0 chrUextra 15432245 15432958 -13571698 - R1_DM LINE R1 -2874 2482 1770 9 702 40 21 0 0 chrUextra 15433229 15433276 -13571380 + AT_rich Low_complexity Low_complexity 1 47 0 9 702 1117 21 0 0 chrUextra 15433871 15434015 -13570641 - PROTOP_A DNA P -441 664 521 9 702 3006 31 0 0 chrUextra 15434018 15434368 -13570288 - PROTOP_A DNA P -714 391 42 9 702 1067 160 128 0 chrUextra 15434365 15434584 -13570072 - IDEFIX_I LTR Gypsy -1083 4545 4299 9 702 1529 0 0 0 chrUextra 15434684 15434866 -13569790 + FW_DM LINE Jockey 4511 4692 0 9 702 6242 22 41 0 chrUextra 15436310 15437023 -13567633 + DIVER_I LTR Pao 751 1492 -4151 9 702 2219 105 13 95 chrUextra 15437148 15437834 -13566822 - DMSAT6 Satellite Satellite 0 629 1 9 702 4156 13 0 0 chrUextra 15437936 15438394 -13566262 + R1_DM LINE R1 4899 5356 0 9 702 1617 72 31 0 chrUextra 15438427 15438649 -13566007 + R1_DM LINE R1 1 229 -5127 9 702 5788 58 1 3 chrUextra 15438752 15439462 -13565194 + BATUMI_I LTR Pao 3546 4254 -3709 9 702 891 51 8 0 chrUextra 15439562 15439680 -13564976 + R1_DM LINE R1 493 611 -4745 9 702 4972 45 2 2 chrUextra 15439680 15440275 -13564381 + R1_DM LINE R1 1103 1697 -3659 9 702 25 31 0 0 chrUextra 15440376 15440408 -13564248 + AT_rich Low_complexity Low_complexity 1 32 0 9 702 23 50 0 48 chrUextra 15440932 15440995 -13563661 + AT_rich Low_complexity Low_complexity 1 60 0 9 702 6511 3 1 3 chrUextra 15441188 15441901 -13562755 + LSU-rRNA_Dme rRNA rRNA 815 1526 -2374 9 702 6198 10 32 1 chrUextra 15442001 15442714 -13561942 - DMRT1B LINE R1 -3813 1370 636 9 702 6385 4 0 3 chrUextra 15442814 15443527 -13561129 + DOC LINE Jockey 1493 2203 -2522 9 702 3122 169 35 23 chrUextra 15443627 15444334 -13560322 - SAR_DM Satellite Satellite -539 933 218 9 702 977 190 14 6 chrUextra 15444440 15445152 -13559504 + SAR_DM Satellite Satellite 1 718 -749 9 702 246 150 0 0 chrUextra 15445275 15445315 -13559341 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 702 246 150 0 0 chrUextra 15445367 15445407 -13559249 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 702 255 125 0 0 chrUextra 15445450 15445490 -13559166 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 702 22 56 0 0 chrUextra 15445503 15445539 -13559117 + AT_rich Low_complexity Low_complexity 1 36 0 9 702 870 9 0 27 chrUextra 15445565 15445677 -13558979 + NTS_DM Other Other 25 133 -107 9 702 1252 18 0 6 chrUextra 15445677 15445842 -13558814 + NTS_DM Other Other 38 201 -39 9 702 538 15 0 42 chrUextra 15445895 15445966 -13558690 + NTS_DM Other Other 25 92 -148 9 702 901 0 9 0 chrUextra 15446066 15446172 -13558484 - ROO_I LTR Pao -8149 107 1 9 702 3719 2 0 2 chrUextra 15446172 15446601 -13558055 - ROO_LTR LTR Pao 0 428 1 9 702 1529 0 0 0 chrUextra 15446601 15446779 -13557877 + ROO_I LTR Pao 6210 6387 -1869 9 702 3448 101 87 33 chrUextra 15446879 15447521 -13557135 - Gypsy12_I LTR Gypsy -4647 899 223 9 702 262 106 0 21 chrUextra 15448180 15448228 -13556428 - HMSBEAGLE_I LTR Gypsy -6308 221 175 9 702 351 49 65 16 chrUextra 15448250 15448312 -13556344 - HMSBEAGLE_I LTR Gypsy -6464 65 1 9 702 362 204 0 11 chrUextra 15448311 15448405 -13556251 - DMLTR5 LTR Gypsy 0 266 174 9 702 505 359 26 8 chrUextra 15448515 15449009 -13555647 - MICROPIA_I LTR Gypsy -3067 1409 907 9 702 6061 3 0 0 chrUextra 15449318 15450031 -13554625 + STALKER4_I LTR Gypsy 4490 5202 -1328 9 702 360 0 0 0 chrUextra 15450804 15450844 -13553812 + (CTTAT)n Simple_repeat Simple_repeat 1 40 0 9 702 341 0 23 0 chrUextra 15450944 15450988 -13553668 - QUASIMODO_LTR LTR Gypsy -613 45 1 9 702 5134 6 0 1 chrUextra 15450988 15451657 -13552999 - QUASIMODO_I LTR Gypsy 0 6060 5393 9 702 28 48 0 0 chrUextra 15451872 15451914 -13552742 + AT_rich Low_complexity Low_complexity 1 42 0 9 702 32 0 0 0 chrUextra 15452243 15452275 -13552381 + AT_rich Low_complexity Low_complexity 1 32 0 9 702 511 0 0 16 chrUextra 15452407 15452470 -13552186 + SSU-rRNA_Dme rRNA rRNA 1 62 -1933 9 702 5637 31 8 4 chrUextra 15452570 15453283 -13551373 + CIRCE LINE Composite 2021 2736 -3620 9 702 1141 13 13 0 chrUextra 15453383 15453535 -13551121 + Invader1_I LTR Gypsy 3033 3186 0 9 702 3579 14 2 0 chrUextra 15453535 15453957 -13550699 + Invader1_LTR LTR Gypsy 1 423 0 9 702 1187 14 0 0 chrUextra 15453957 15454096 -13550560 + Invader1_I LTR Gypsy 1 139 -3047 9 702 711 98 0 0 chrUextra 15454786 15454909 -13549747 + (CATGT)n Simple_repeat Simple_repeat 2 124 0 9 702 441 42 0 14 chrUextra 15455009 15455082 -13549574 + NTS_DM Other Other 130 201 -39 9 702 870 9 0 27 chrUextra 15455134 15455246 -13549410 + NTS_DM Other Other 25 133 -107 9 702 1252 18 0 6 chrUextra 15455246 15455411 -13549245 + NTS_DM Other Other 38 201 -39 9 702 21 57 0 0 chrUextra 15455411 15455446 -13549210 + AT_rich Low_complexity Low_complexity 1 35 0 9 702 832 9 9 27 chrUextra 15455472 15455583 -13549073 + NTS_DM Other Other 25 133 -107 9 702 817 0 0 0 chrUextra 15455583 15455679 -13548977 + NTS_DM Other Other 38 133 -107 9 702 304 70 0 0 chrUextra 15455679 15455722 -13548934 + NTS_DM Other Other 38 80 -160 9 702 6024 1 0 1 chrUextra 15455822 15456533 -13548123 + DM176_I LTR Gypsy 3130 3839 -2581 9 702 6162 0 3 0 chrUextra 15456635 15457348 -13547308 - FW_DM LINE Jockey -473 4219 3505 9 702 5685 1 0 35 chrUextra 15457448 15458161 -13546495 - LSU-rRNA_Dme rRNA rRNA -3096 804 117 9 702 4111 0 0 0 chrUextra 15458261 15458745 -13545911 + BARI_DM DNA Tc1 1244 1727 -1 9 702 1982 0 0 0 chrUextra 15458745 15458974 -13545682 + BARI_DM DNA Tc1 4 232 -1496 9 702 5746 14 0 0 chrUextra 15459076 15459787 -13544869 + Invader2_I LTR Gypsy 3019 3729 -863 9 702 201 121 0 0 chrUextra 15460455 15460488 -13544168 + (GA)n Simple_repeat Simple_repeat 1 33 0 9 702 4214 4 2 8 chrUextra 15460700 15461225 -13543431 - Copia_I LTR Copia -629 3964 3443 9 702 1547 0 5 0 chrUextra 15461219 15461413 -13543243 - Copia_I LTR Copia -1836 2757 2563 9 702 1985 8 0 0 chrUextra 15461918 15462158 -13542498 - ALUII_DM Unknown Unknown 0 240 1 9 702 21 57 0 0 chrUextra 15462158 15462193 -13542463 + AT_rich Low_complexity Low_complexity 1 35 0 9 702 3056 176 13 11 chrUextra 15462326 15463039 -13541617 - SAR_DM Satellite Satellite -553 919 206 9 702 5801 21 30 0 chrUextra 15463139 15463852 -13540804 + FW_DM LINE Jockey 374 1107 -3585 9 702 6230 0 0 1 chrUextra 15463952 15464665 -13539991 + SSU-rRNA_Dme rRNA rRNA 416 1127 -868 9 702 6000 18 0 0 chrUextra 15464765 15465478 -13539178 - Copia2_I LTR Copia -2074 2088 1376 9 702 5733 17 42 3 chrUextra 15465578 15466291 -13538365 + DOC LINE Jockey 3254 3994 -731 9 87 843 97 0 0 chrUextra 15466391 15466536 -13538120 + (TCTTG)n Simple_repeat Simple_repeat 4 148 0 9 703 2916 183 34 11 chrUextra 15467205 15467917 -13536739 + SAR_DM Satellite Satellite 278 1005 -467 9 703 4182 91 76 32 chrUextra 15468017 15468730 -13535926 - Gypsy12_I LTR Gypsy -4415 1131 388 9 703 5836 24 1 0 chrUextra 15468830 15469543 -13535113 - R1_DM LINE R1 -1541 3815 3102 9 703 3524 134 3 3 chrUextra 15469645 15470356 -13534300 - BATUMI_I LTR Pao -3248 4666 3880 9 703 1346 128 11 32 chrUextra 15470459 15470742 -13533914 + TAHRE LINE telomeric 10176 10452 -11 9 703 1290 147 45 73 chrUextra 15470741 15471167 -13533489 + HETA LINE telomeric 190 603 -5478 9 703 5369 0 2 0 chrUextra 15472082 15472695 -13531961 + SSU-rRNA_Dme rRNA rRNA 1382 1995 0 9 703 241 35 0 0 chrUextra 15472899 15472928 -13531728 + MICROPIA_LTR LTR Gypsy 448 476 0 9 703 3648 2 5 0 chrUextra 15472936 15473357 -13531299 + Invader1_LTR LTR Gypsy 1 423 0 9 703 1429 12 0 0 chrUextra 15473357 15473527 -13531129 + Copia2_LTR_DM LTR Copia 29 198 0 9 703 4795 0 0 0 chrUextra 15473708 15474262 -13530394 + DMRT1B LINE R1 4516 5069 -114 9 703 5234 41 38 4 chrUextra 15474521 15475208 -13529448 + DMCR1A LINE CR1 1163 1872 -2598 9 703 1548 0 0 0 chrUextra 15475334 15475506 -13529150 + (CACAA)n Simple_repeat Simple_repeat 5 176 0 9 703 4570 9 0 0 chrUextra 15475506 15476047 -13528609 - DMRT1B LINE R1 -140 5043 4503 9 703 1041 94 0 0 chrUextra 15476150 15476438 -13528218 + (CATGT)n Simple_repeat Simple_repeat 1 288 0 9 703 2346 214 37 6 chrUextra 15476960 15477632 -13527024 - SAR_DM Satellite Satellite -589 883 191 9 703 652 172 0 0 chrUextra 15477537 15477671 -13526985 + ARS406_DM Unknown Unknown 3 136 -217 9 703 4009 135 16 0 chrUextra 15477777 15478479 -13526177 - TART_B1 LINE telomeric -8959 1695 983 9 703 3617 27 0 5 chrUextra 15478586 15479030 -13525626 + R1_DM LINE R1 4915 5356 0 9 703 1753 68 8 0 chrUextra 15479051 15479299 -13525357 + R1_DM LINE R1 23 272 -5084 9 703 4747 89 3 4 chrUextra 15479401 15480112 -13524544 + S_DM DNA Tc1 67 776 -960 9 703 6068 7 1 0 chrUextra 15480212 15480925 -13523731 + Gypsy6_I LTR Gypsy 1521 2234 -4778 9 703 3211 51 83 60 chrUextra 15481025 15481738 -13522918 + ROO_I LTR Pao 305 1457 -6799 9 703 3749 0 0 0 chrUextra 15481838 15482279 -13522377 + BARI_DM DNA Tc1 1287 1727 -1 9 703 2374 0 0 0 chrUextra 15482279 15482551 -13522105 + BARI_DM DNA Tc1 4 275 -1453 9 703 5929 10 0 13 chrUextra 15482651 15483364 -13521292 - FW_DM LINE Jockey -2149 2543 1840 9 703 6070 1 1 3 chrUextra 15483464 15484177 -13520479 + LSU-rRNA_Dme rRNA rRNA 630 1341 -2559 9 703 32 26 0 0 chrUextra 15484783 15484822 -13519834 + AT_rich Low_complexity Low_complexity 1 39 0 9 703 234 225 117 75 chrUextra 15484868 15484988 -13519668 + TAHRE LINE telomeric 9807 9931 -532 9 703 6076 3 1 0 chrUextra 15485090 15485803 -13518853 - ROO_I LTR Pao -284 7972 7259 9 703 262 106 0 21 chrUextra 15486552 15486600 -13518056 - HMSBEAGLE_I LTR Gypsy -6308 221 175 9 703 1424 0 0 0 chrUextra 15486716 15486880 -13517776 - LSU-rRNA_Dme rRNA rRNA -3736 164 1 9 703 21 95 0 0 chrUextra 15486892 15486955 -13517701 + AT_rich Low_complexity Low_complexity 1 63 0 9 703 34 24 0 0 chrUextra 15487168 15487209 -13517447 + AT_rich Low_complexity Low_complexity 1 41 0 9 703 2651 73 0 11 chrUextra 15487529 15487901 -13516755 + Gypsy12_I LTR Gypsy 5179 5546 0 9 703 1463 193 15 29 chrUextra 15487901 15488242 -13516414 + Gypsy12_LTR LTR Gypsy 1 336 -2000 9 703 2969 175 9 9 chrUextra 15488344 15489020 -13515636 - SAR_DM Satellite Satellite -602 870 195 9 703 863 78 0 0 chrUextra 15488927 15489055 -13515601 + ARS406_DM Unknown Unknown 1 128 -225 9 703 5930 18 0 1 chrUextra 15489155 15489868 -13514788 - R1_DM LINE R1 -2988 2368 1657 9 703 4393 89 35 4 chrUextra 15489970 15490679 -13513977 - TART LINE telomeric -13198 1279 549 9 703 5873 14 1 1 chrUextra 15491594 15492304 -13512352 + R1_DM LINE R1 3424 4133 -1223 9 703 5823 13 25 0 chrUextra 15492406 15493118 -13511538 - Invader3_I LTR Gypsy -1777 3111 2382 9 703 2838 176 41 13 chrUextra 15493222 15493930 -13510726 + SAR_DM Satellite Satellite 195 922 -550 9 703 3755 105 20 2 chrUextra 15494030 15494742 -13509914 - IDEFIX_I LTR Gypsy -3416 2644 1497 9 703 816 114 12 8 chrUextra 15494842 15495094 -13509562 + (AATAG)n Simple_repeat Simple_repeat 1 253 0 9 703 1252 59 3 48 chrUextra 15495132 15495505 -13509151 + (AATAG)n Simple_repeat Simple_repeat 1 356 0 9 703 2916 179 11 21 chrUextra 15495655 15496357 -13508299 + SAR_DM Satellite Satellite 425 1119 -353 9 703 6007 1 4 4 chrUextra 15496466 15497178 -13507478 + LSU-rRNA_Dme rRNA rRNA 1045 1756 -2144 9 703 5937 25 0 0 chrUextra 15497278 15497990 -13506666 - R1_DM LINE R1 -611 4745 4034 9 703 327 233 0 0 chrUextra 15498091 15498194 -13506462 + (CAAA)n Simple_repeat Simple_repeat 4 106 0 9 703 3465 0 0 2 chrUextra 15498226 15498629 -13506027 - STALKER4_LTR LTR Gypsy 0 402 1 9 703 1375 0 0 0 chrUextra 15498629 15498802 -13505854 - STALKER4_I LTR Gypsy 0 6530 6358 9 703 489 73 0 0 chrUextra 15498902 15498970 -13505686 - HETA LINE telomeric -4120 1961 1894 9 703 2543 138 75 2 chrUextra 15498966 15499614 -13505042 - HETA LINE telomeric -4524 1557 697 9 703 2007 63 0 0 chrUextra 15499716 15500000 -13504656 + TART LINE telomeric 9287 9570 -4907 9 703 2972 50 43 7 chrUextra 15500000 15500422 -13504234 + HETA LINE telomeric 5081 5517 -564 9 703 3146 172 11 10 chrUextra 15500526 15501238 -13503418 - SAR_DM Satellite Satellite -457 1015 303 9 703 3079 147 25 53 chrUextra 15501338 15502050 -13502606 + TART LINE telomeric 9614 10305 -4172 9 703 2719 193 17 9 chrUextra 15502160 15502849 -13501807 - SAR_DM Satellite Satellite -396 1076 382 9 703 6033 8 0 0 chrUextra 15502962 15503674 -13500982 + DMRT1B LINE R1 3860 4571 -612 9 703 378 0 0 0 chrUextra 15503774 15503816 -13500840 + (CACAA)n Simple_repeat Simple_repeat 2 43 0 9 703 3050 169 29 11 chrUextra 15504586 15505286 -13499370 - SAR_DM Satellite Satellite -435 1037 326 9 703 28 48 0 0 chrUextra 15505495 15505537 -13499119 + AT_rich Low_complexity Low_complexity 1 42 0 9 703 406 0 37 0 chrUextra 15505756 15505810 -13498846 + (TA)n Simple_repeat Simple_repeat 2 57 0 9 703 1711 15 0 0 chrUextra 15505907 15506110 -13498546 + SSU-rRNA_Dme rRNA rRNA 1 203 -1792 9 703 5942 18 1 3 chrUextra 15506210 15506922 -13497734 - MICROPIA_I LTR Gypsy -3557 919 209 9 703 5943 6 0 0 chrUextra 15507028 15507734 -13496922 + G6_DM LINE Jockey 68 773 -1269 9 703 3000 176 7 7 chrUextra 15507834 15508509 -13496147 - SAR_DM Satellite Satellite -603 869 195 9 703 762 115 0 0 chrUextra 15508416 15508546 -13496110 + ARS406_DM Unknown Unknown 1 130 -223 9 703 2747 179 20 27 chrUextra 15508646 15509354 -13495302 + SAR_DM Satellite Satellite 462 1164 -308 9 703 6101 0 0 0 chrUextra 15509458 15510170 -13494486 + STALKER4_I LTR Gypsy 4457 5168 -1362 9 703 1722 19 0 23 chrUextra 15510270 15510488 -13494168 + BATUMI_I LTR Pao 7090 7302 -661 9 703 4053 10 0 4 chrUextra 15510501 15510982 -13493674 - BATUMI_I LTR Pao -1543 6420 5942 9 703 6215 0 1 1 chrUextra 15511082 15511794 -13492862 + LSU-rRNA_Dme rRNA rRNA 3166 3877 -23 9 703 4316 0 0 2 chrUextra 15511894 15512396 -13492260 - ACCORD_LTR LTR Gypsy -57 501 1 9 703 1738 18 4 22 chrUextra 15512396 15512606 -13492050 - R1_DM LINE R1 -2231 3125 2920 9 703 6116 1 1 3 chrUextra 15512706 15513418 -13491238 + LSU-rRNA_Dme rRNA rRNA 926 1636 -2264 9 703 2896 3 0 0 chrUextra 15513889 15514230 -13490426 + IDEFIX_I LTR Gypsy 1 341 -5287 9 703 2321 0 0 82 chrUextra 15514330 15514646 -13490010 - LSU-rRNA_Dme rRNA rRNA -3610 290 1 9 703 21 95 0 0 chrUextra 15514658 15514721 -13489935 + AT_rich Low_complexity Low_complexity 1 63 0 9 703 34 24 0 0 chrUextra 15514934 15514975 -13489681 + AT_rich Low_complexity Low_complexity 1 41 0 9 703 5641 0 0 1 chrUextra 15515185 15515854 -13488802 + LSU-rRNA_Dme rRNA rRNA 218 885 -3015 9 703 6056 0 0 0 chrUextra 15515954 15516666 -13487990 - MDG3_I LTR Gypsy -1041 3945 3234 9 703 1998 178 51 36 chrUextra 15516767 15517293 -13487363 + Stalker2_I LTR Gypsy 322 855 -6547 9 703 1227 0 0 0 chrUextra 15517336 15517478 -13487178 + STALKER4_I LTR Gypsy 1681 1822 -4708 9 703 2051 27 0 0 chrUextra 15517578 15517834 -13486822 - FW_DM LINE Jockey -3046 1646 1391 9 703 3723 13 0 4 chrUextra 15517829 15518290 -13486366 - DOC LINE Jockey 0 4725 4267 9 703 5927 10 1 0 chrUextra 15518390 15519102 -13485554 + QUASIMODO_I LTR Gypsy 2401 3113 -2947 9 703 520 16 0 0 chrUextra 15520014 15520076 -13484580 - PROTOP_A DNA P -1043 62 1 9 703 3437 65 402 0 chrUextra 15520079 15520726 -13483930 - TART LINE telomeric -11959 2518 1612 9 703 1767 14 0 0 chrUextra 15522450 15522661 -13481995 - MAX_LTR LTR Pao -110 211 1 9 703 363 145 0 80 chrUextra 15522677 15522752 -13481904 - HETRP_DM Satellite Satellite -286 1586 1518 9 703 669 179 7 14 chrUextra 15522868 15523010 -13481646 - HETRP_DM Satellite Satellite -203 1669 1529 9 703 21 89 0 0 chrUextra 15523487 15523543 -13481113 + AT_rich Low_complexity Low_complexity 1 56 0 9 703 3611 0 2 0 chrUextra 15523562 15523974 -13480682 - SSU-rRNA_Dme rRNA rRNA 0 1995 1583 9 703 2582 251 1 1 chrUextra 15524074 15524781 -13479875 + ROVER-I_DM LTR Gypsy 3128 3834 -2750 9 703 5944 10 0 0 chrUextra 15524886 15525598 -13479058 - STALKER4_I LTR Gypsy -3686 2844 2133 9 703 1711 64 7 47 chrUextra 15525706 15525983 -13478673 + TAHRE LINE telomeric 10186 10451 -12 9 703 1479 171 98 54 chrUextra 15525982 15526409 -13478247 + TAHRE LINE telomeric 7044 7489 -2974 9 703 1165 7 28 0 chrUextra 15526514 15526658 -13477998 + (TTATA)n Simple_repeat Simple_repeat 1 148 0 9 703 1755 112 46 31 chrUextra 15526659 15527010 -13477646 - ROVER-LTR_DM LTR Gypsy -11 356 1 9 703 866 159 90 19 chrUextra 15527010 15527222 -13477434 - ROVER-I_DM LTR Gypsy 0 6584 6358 9 703 2461 82 18 21 chrUextra 15527323 15528034 -13476622 + DMSAT6 Satellite Satellite 1 708 -71 9 703 5629 20 1 4 chrUextra 15528134 15528846 -13475810 - PROTOP_A DNA P -65 1040 331 9 703 6066 1 0 1 chrUextra 15528948 15529658 -13474998 - LSU-rRNA_Dme rRNA rRNA -2644 1256 548 9 703 318 293 22 22 chrUextra 15529888 15530066 -13474590 - MDG3_I LTR Gypsy -1546 3440 3263 9 703 274 310 1 1 chrUextra 15530352 15530469 -13474187 - Invader2_I LTR Gypsy -1843 2749 2650 9 703 30 27 0 0 chrUextra 15530777 15530814 -13473842 + AT_rich Low_complexity Low_complexity 1 37 0 9 703 192 40 0 0 chrUextra 15530931 15530956 -13473700 + (TAA)n Simple_repeat Simple_repeat 1 25 0 9 703 21 95 0 0 chrUextra 15531404 15531467 -13473189 + AT_rich Low_complexity Low_complexity 1 63 0 9 703 34 24 0 0 chrUextra 15531680 15531721 -13472935 + AT_rich Low_complexity Low_complexity 1 41 0 9 703 5932 8 3 3 chrUextra 15532194 15532906 -13471750 - R1_DM LINE R1 -881 4475 3764 9 703 6147 4 0 0 chrUextra 15533006 15533718 -13470938 + DMRT1B LINE R1 1444 2155 -3028 9 703 2102 28 0 0 chrUextra 15533818 15534070 -13470586 - R1_DM LINE R1 -1979 3377 3126 9 703 3979 2 0 0 chrUextra 15534070 15534530 -13470126 + ACCORD_LTR LTR Gypsy 1 460 -98 9 703 317 281 104 86 chrUextra 15534943 15535223 -13469433 - Invader1_LTR LTR Gypsy -55 368 84 9 703 26 30 0 0 chrUextra 15535465 15535498 -13469158 + AT_rich Low_complexity Low_complexity 1 33 0 9 703 879 178 102 15 chrUextra 15536665 15536870 -13467786 + DMLTR5 LTR Gypsy 44 266 0 9 703 348 111 32 0 chrUextra 15536869 15536932 -13467724 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 9 703 889 178 102 15 chrUextra 15537457 15537662 -13466994 + DMLTR5 LTR Gypsy 44 266 0 9 703 298 64 0 21 chrUextra 15537726 15537774 -13466882 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 9 703 1149 75 40 0 chrUextra 15537881 15538054 -13466602 - MDG1_I LTR Gypsy -1016 5580 5401 9 703 3788 49 23 4 chrUextra 15538059 15538590 -13466066 - DM297_I LTR Gypsy -1816 4351 3811 9 703 5978 7 0 0 chrUextra 15538692 15539402 -13465254 + MDG3_I LTR Gypsy 2955 3664 -1322 9 703 2422 89 26 14 chrUextra 15539502 15540198 -13464458 + DMSAT6 Satellite Satellite 1 704 -40 9 703 6039 4 0 0 chrUextra 15540314 15541026 -13463630 + ROO_I LTR Pao 5924 6635 -1621 9 703 6204 1 1 0 chrUextra 15541126 15541838 -13462818 + DOC LINE Jockey 3676 4388 -337 9 703 2582 0 0 3 chrUextra 15541938 15542240 -13462416 + Stalker2_LTR LTR Gypsy 124 424 0 9 703 3458 2 12 0 chrUextra 15542240 15542650 -13462006 + Stalker2_I LTR Gypsy 1 415 -6987 9 703 6206 1 0 0 chrUextra 15542750 15543462 -13461194 + ROO_I LTR Pao 6920 7631 -625 9 703 5916 14 1 3 chrUextra 15544374 15545086 -13459570 - DM1731_I LTR Copia -2993 983 273 9 703 5910 14 4 0 chrUextra 15545186 15545898 -13458758 + DM1731_I LTR Copia 345 1059 -2917 9 703 3502 26 2 0 chrUextra 15545998 15546428 -13458228 + R1_DM LINE R1 4926 5356 0 9 703 1747 72 8 0 chrUextra 15546461 15546710 -13457946 + R1_DM LINE R1 1 251 -5105 9 703 2647 175 25 31 chrUextra 15546810 15547522 -13457134 - SAR_DM Satellite Satellite -1019 707 1 9 703 2592 214 74 8 chrUextra 15547625 15548328 -13456328 - TAHRE LINE telomeric -8950 1513 765 9 703 22 0 0 0 chrUextra 15548443 15548465 -13456191 + AT_rich Low_complexity Low_complexity 1 22 0 9 703 2997 230 5 3 chrUextra 15548474 15549145 -13455511 - Gypsy6_I LTR Gypsy -1694 5318 4647 9 703 2890 188 16 22 chrUextra 15549246 15549957 -13454699 - SAR_DM Satellite Satellite -614 706 1 9 703 4905 61 30 1 chrUextra 15550062 15550769 -13453887 + IDEFIX_I LTR Gypsy 4318 5044 -584 9 703 412 269 154 23 chrUextra 15550910 15551169 -13453487 + BURDOCK_I LTR Gypsy 1560 1852 -4008 9 703 1314 29 6 39 chrUextra 15551195 15551377 -13453279 - G5A_DM LINE Jockey -3 2838 2663 9 703 329 305 0 0 chrUextra 15551378 15551506 -13453150 + Gypsy7_I LTR Gypsy 1239 1366 -3618 9 703 2900 183 13 22 chrUextra 15551683 15552394 -13452262 - SAR_DM Satellite Satellite -369 1103 400 9 703 3996 101 82 28 chrUextra 15552494 15553205 -13451451 - TART LINE telomeric -3842 10635 9887 9 703 3096 169 11 10 chrUextra 15553311 15554012 -13450644 - SAR_DM Satellite Satellite -478 994 293 9 703 256 128 0 0 chrUextra 15554118 15554165 -13450491 - ARS406_DM Unknown Unknown -306 47 1 9 703 3029 173 16 13 chrUextra 15554125 15554815 -13449841 + SAR_DM Satellite Satellite 246 937 -535 9 703 888 73 7 0 chrUextra 15554693 15554830 -13449826 - ARS406_DM Unknown Unknown -164 189 52 9 703 3167 173 7 8 chrUextra 15554932 15555636 -13449020 - SAR_DM Satellite Satellite -401 1071 369 9 703 6414 15 0 0 chrUextra 15555742 15556454 -13448202 - Gypsy4_I LTR Gypsy -1689 4599 3888 9 703 5353 29 10 3 chrUextra 15556638 15557266 -13447390 + NINJA_I LTR Pao 1955 2586 -3425 9 703 6535 3 0 0 chrUextra 15558178 15558890 -13445766 + R1_DM LINE R1 2616 3327 -2029 9 703 1324 30 0 12 chrUextra 15559802 15559973 -13444683 + (TTCTC)n Simple_repeat Simple_repeat 2 170 0 9 703 416 87 19 78 chrUextra 15559979 15560509 -13444147 + CT-rich Low_complexity Low_complexity 1 498 0 9 703 213 39 0 0 chrUextra 15561636 15561662 -13442994 + (TC)n Simple_repeat Simple_repeat 1 26 0 9 703 1012 0 0 0 chrUextra 15562238 15562349 -13442307 + R1_DM LINE R1 4956 5066 -290 9 703 974 44 0 0 chrUextra 15562346 15562460 -13442196 + R1_DM LINE R1 5243 5356 0 9 703 3521 68 9 4 chrUextra 15562493 15562949 -13441707 + R1_DM LINE R1 1 458 -4898 9 703 254 306 110 70 chrUextra 15563051 15563734 -13440922 - Copia2_I LTR Copia -2956 1206 497 9 703 6068 0 0 35 chrUextra 15564674 15565386 -13439270 + LSU-rRNA_Dme rRNA rRNA 80 766 -3134 9 703 6400 0 4 0 chrUextra 15565486 15566198 -13438458 - ACCORD2_I LTR Gypsy -1132 6080 5366 9 703 3668 72 42 29 chrUextra 15567110 15567822 -13436834 + PROTOP_A DNA P 467 1135 -18 9 703 1218 244 49 8 chrUextra 15568056 15568634 -13436022 + Gypsy8_I LTR Gypsy 1035 1193 -3154 9 703 6434 4 3 1 chrUextra 15568734 15569446 -13435210 - R1_DM LINE R1 -3603 1753 1041 9 703 6577 6 0 0 chrUextra 15569547 15570258 -13434398 - DM1731_I LTR Copia -924 3052 2342 9 703 6545 1 0 0 chrUextra 15570358 15571070 -13433586 + R1_DM LINE R1 2601 3312 -2044 9 703 6571 4 0 0 chrUextra 15571171 15571882 -13432774 - G_DM LINE Jockey -872 3474 2764 9 703 5524 65 41 3 chrUextra 15571982 15572694 -13431962 + R1_DM LINE R1 14 752 -4604 9 703 378 179 0 0 chrUextra 15572803 15572898 -13431758 + (CATAA)n Simple_repeat Simple_repeat 5 99 0 9 703 5411 90 0 13 chrUextra 15573606 15574318 -13430338 - Gypsy12_I LTR Gypsy -150 5396 4694 9 703 1247 68 0 35 chrUextra 15574961 15575130 -13429526 - TART LINE telomeric -6734 7743 7581 9 703 6364 8 4 1 chrUextra 15575230 15575942 -13428714 + R1_DM LINE R1 3601 4314 -1042 9 703 3133 94 51 21 chrUextra 15576045 15576754 -13427902 - TART LINE telomeric -6799 7678 7216 9 703 266 196 0 19 chrUextra 15576862 15576914 -13427742 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 703 266 196 0 19 chrUextra 15576954 15577006 -13427650 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 703 277 176 0 19 chrUextra 15577037 15577089 -13427567 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 703 22 56 0 0 chrUextra 15577102 15577138 -13427518 + AT_rich Low_complexity Low_complexity 1 36 0 9 703 928 9 0 27 chrUextra 15577164 15577276 -13427380 + NTS_DM Other Other 25 133 -107 9 703 1332 18 0 6 chrUextra 15577276 15577441 -13427215 + NTS_DM Other Other 38 201 -39 9 703 410 0 0 0 chrUextra 15577522 15577566 -13427090 + NTS_DM Other Other 1 44 -196 9 703 6286 32 0 0 chrUextra 15577666 15578378 -13426278 + DIVER_I LTR Pao 4812 5523 -120 9 703 2322 11 7 11 chrUextra 15578480 15578756 -13425900 + BLASTOPIA_LTR LTR Gypsy 1 275 0 9 703 3941 2 2 0 chrUextra 15578756 15579190 -13425466 + BLASTOPIA_I LTR Gypsy 1 435 -4046 9 703 6357 20 0 0 chrUextra 15579290 15580002 -13424654 - DMRT1A LINE R1 -1137 4046 3335 9 703 6672 1 0 0 chrUextra 15580102 15580814 -13423842 - Copia2_I LTR Copia -526 3636 2925 9 703 4481 128 3 24 chrUextra 15581726 15582437 -13422219 + Gypsy12_I LTR Gypsy 2313 3008 -2538 9 703 1347 16 21 21 chrUextra 15582539 15582725 -13421931 + NTS_DM Other Other 55 240 0 9 703 1880 17 17 17 chrUextra 15582725 15582965 -13421691 + NTS_DM Other Other 1 240 0 9 703 1869 21 17 17 chrUextra 15582965 15583205 -13421451 + NTS_DM Other Other 1 240 0 9 703 403 22 0 0 chrUextra 15583205 15583250 -13421406 + NTS_DM Other Other 1 45 -195 9 703 5236 61 43 14 chrUextra 15583350 15584062 -13420594 + BATUMI_I LTR Pao 3064 3796 -4167 9 703 3489 162 13 10 chrUextra 15584175 15584874 -13419782 - SAR_DM Satellite Satellite -396 1076 376 9 703 3273 179 14 9 chrUextra 15584987 15585684 -13418972 - SAR_DM Satellite Satellite -396 1076 376 9 703 5505 39 0 15 chrUextra 15585786 15586498 -13418158 + IDEFIX_I LTR Gypsy 4453 5153 -475 9 703 5399 82 3 3 chrUextra 15586598 15587310 -13417346 - HETA LINE telomeric -3501 2580 1869 9 703 6534 1 1 3 chrUextra 15587410 15588122 -13416534 + SSU-rRNA_Dme rRNA rRNA 883 1593 -402 9 703 2917 48 57 0 chrUextra 15588223 15588594 -13416062 + PROTOP_A DNA P 714 1105 0 9 703 4228 41 22 9 chrUextra 15589034 15589581 -13415075 - BATUMI_I LTR Pao -7409 554 1 9 703 1270 43 6 24 chrUextra 15589581 15589746 -13414910 - BATUMI_LTR LTR Pao 0 272 111 9 703 6328 22 0 0 chrUextra 15589846 15590558 -13414098 - MAX_I LTR Pao -5412 2502 1791 9 703 6249 23 1 0 chrUextra 15590662 15591370 -13413286 - R1_DM LINE R1 -1755 3601 2893 9 703 3049 175 46 11 chrUextra 15591470 15592171 -13412485 - SAR_DM Satellite Satellite -524 948 224 9 703 3260 0 0 0 chrUextra 15592282 15592635 -13412021 - ROO_I LTR Pao -7903 353 1 9 703 3380 0 0 0 chrUextra 15592635 15592994 -13411662 - ROO_LTR LTR Pao 0 428 70 9 703 1827 253 12 64 chrUextra 15593095 15593691 -13410965 + Gypsy12_LTR LTR Gypsy 208 772 -1564 9 703 3644 49 5 60 chrUextra 15593906 15594511 -13410145 - CIRCE LINE Composite -858 5498 4981 9 703 5996 30 31 0 chrUextra 15595530 15596242 -13408414 - R1_DM LINE R1 -2536 2820 2087 9 703 2250 0 0 89 chrUextra 15596342 15596633 -13408023 - LSU-rRNA_Dme rRNA rRNA -3635 265 1 9 703 21 95 0 0 chrUextra 15596645 15596708 -13407948 + AT_rich Low_complexity Low_complexity 1 63 0 9 703 34 24 0 0 chrUextra 15596921 15596962 -13407694 + AT_rich Low_complexity Low_complexity 1 41 0 9 703 724 0 0 0 chrUextra 15597154 15597234 -13407422 - Copia2_LTR_DM LTR Copia -90 108 29 9 87 3857 9 5 0 chrUextra 15597234 15597655 -13407001 - Invader1_LTR LTR Gypsy 0 423 1 9 704 1739 15 5 5 chrUextra 15597663 15597866 -13406790 - MICROPIA_LTR LTR Gypsy 0 476 274 9 704 5555 2 0 0 chrUextra 15597966 15598562 -13406094 - DOC LINE Jockey -449 4276 3681 9 704 6691 0 0 0 chrUextra 15598778 15599490 -13405166 - NOMAD_I LTR Gypsy -2777 3795 3084 9 704 2600 13 0 0 chrUextra 15599590 15599888 -13404768 + FW_DM LINE Jockey 4395 4692 0 9 704 2869 192 32 30 chrUextra 15600402 15601112 -13403544 + SAR_DM Satellite Satellite 462 1173 -299 9 704 3556 25 101 4 chrUextra 15601214 15601926 -13402730 + BLOOD_I LTR Gypsy 164 944 -5669 9 704 502 108 27 0 chrUextra 15602840 15602914 -13401742 - NTS_DM Other Other -161 79 4 9 704 1388 6 0 18 chrUextra 15603024 15603189 -13401467 - NTS_DM Other Other -78 162 1 9 704 1972 4 17 13 chrUextra 15603189 15603428 -13401228 - NTS_DM Other Other 0 240 1 9 704 875 8 33 25 chrUextra 15603428 15603550 -13401106 - NTS_DM Other Other 0 240 118 9 704 6546 1 0 0 chrUextra 15603650 15604362 -13400294 + R1_DM LINE R1 2691 3402 -1954 9 704 3263 179 13 8 chrUextra 15604463 15605166 -13399490 - SAR_DM Satellite Satellite -587 885 180 9 704 24 32 0 0 chrUextra 15605450 15605481 -13399175 + AT_rich Low_complexity Low_complexity 1 31 0 9 704 637 67 11 22 chrUextra 15605581 15605673 -13398983 - BS3_DM LINE Jockey 0 1790 1700 9 704 6526 4 0 1 chrUextra 15606086 15606798 -13397858 + Gypsy4_I LTR Gypsy 1213 1923 -4365 9 704 3428 28 4 47 chrUextra 15607971 15608422 -13396234 + CIRCE LINE Composite 4981 5412 -944 9 704 5969 40 1 4 chrUextra 15608522 15609234 -13395422 + R1_DM LINE R1 1027 1736 -3620 9 704 909 18 0 27 chrUextra 15609338 15609450 -13395206 + NTS_DM Other Other 25 133 -107 9 704 1332 18 0 6 chrUextra 15609450 15609615 -13395041 + NTS_DM Other Other 38 201 -39 9 704 928 9 0 27 chrUextra 15609667 15609779 -13394877 + NTS_DM Other Other 25 133 -107 9 704 1332 18 0 6 chrUextra 15609779 15609944 -13394712 + NTS_DM Other Other 38 201 -39 9 704 371 0 20 60 chrUextra 15609996 15610046 -13394610 + NTS_DM Other Other 25 72 -168 9 704 5238 33 69 11 chrUextra 15610958 15611670 -13392986 + STALKER4_I LTR Gypsy 3517 4269 -2261 9 704 246 150 0 0 chrUextra 15611856 15611896 -13392760 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 704 255 125 0 0 chrUextra 15611939 15611979 -13392677 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 704 22 56 0 0 chrUextra 15611992 15612028 -13392628 + AT_rich Low_complexity Low_complexity 1 36 0 9 704 870 9 0 27 chrUextra 15612054 15612166 -13392490 + NTS_DM Other Other 25 133 -107 9 704 1252 18 0 6 chrUextra 15612166 15612331 -13392325 + NTS_DM Other Other 38 201 -39 9 704 731 11 0 40 chrUextra 15612383 15612482 -13392174 + NTS_DM Other Other 25 119 -121 9 704 1907 5 0 0 chrUextra 15612582 15612802 -13391854 + POGO DNA Pogo 484 703 -1418 9 704 433 0 0 0 chrUextra 15612800 15612850 -13391806 - Copia_I LTR Copia -4543 50 1 9 704 2249 4 4 0 chrUextra 15612850 15613125 -13391531 - Copia_LTR LTR Copia 0 276 1 9 704 487 109 33 0 chrUextra 15613202 15613294 -13391362 - PROTOP DNA P -861 3619 3525 9 704 1711 14 39 0 chrUextra 15613394 15613602 -13391054 - MICROPIA_I LTR Gypsy -4260 216 1 9 704 3639 11 0 83 chrUextra 15613602 15614106 -13390550 - MICROPIA_LTR LTR Gypsy 0 476 15 9 704 823 28 0 27 chrUextra 15614281 15614393 -13390263 + NTS_DM Other Other 25 133 -107 9 704 1057 79 0 12 chrUextra 15614393 15614559 -13390097 + NTS_DM Other Other 38 201 -39 9 704 870 9 0 27 chrUextra 15614611 15614723 -13389933 + NTS_DM Other Other 25 133 -107 9 704 1252 18 0 6 chrUextra 15614723 15614888 -13389768 + NTS_DM Other Other 38 201 -39 9 704 5808 15 13 0 chrUextra 15615018 15615730 -13388926 - STALKER4_I LTR Gypsy -3598 2932 2212 9 704 2645 180 62 27 chrUextra 15615830 15616542 -13388114 + SAR_DM Satellite Satellite 1 737 -208 9 704 5598 0 1 36 chrUextra 15616642 15617354 -13387302 + LSU-rRNA_Dme rRNA rRNA 166 852 -3048 9 704 6173 0 0 0 chrUextra 15617454 15618166 -13386490 + QUASIMODO_I LTR Gypsy 250 961 -5099 9 704 3115 166 12 9 chrUextra 15618266 15618952 -13385704 + SAR_DM Satellite Satellite 389 1076 -396 9 704 813 160 0 0 chrUextra 15619078 15619222 -13385434 + CT-rich Low_complexity Low_complexity 2 145 0 9 704 1324 199 50 9 chrUextra 15620704 15621023 -13383633 - HETA LINE telomeric -1730 4351 4020 9 704 22 56 0 0 chrUextra 15621176 15621212 -13383444 + AT_rich Low_complexity Low_complexity 1 36 0 9 704 322 178 50 101 chrUextra 15621257 15621376 -13383280 + Copia_I LTR Copia 4401 4513 -80 9 704 2791 202 16 19 chrUextra 15621515 15622226 -13382430 + SAR_DM Satellite Satellite 1 709 -208 9 704 2743 174 31 27 chrUextra 15623138 15623850 -13380806 + SAR_DM Satellite Satellite 1 715 -354 9 704 5138 42 0 0 chrUextra 15624019 15624658 -13379998 - BATUMI_I LTR Pao -3642 4321 3683 9 704 254 300 15 15 chrUextra 15624800 15624932 -13379724 + (TATATG)n Simple_repeat Simple_repeat 2 133 0 9 704 22 0 0 0 chrUextra 15624958 15624980 -13379676 + AT_rich Low_complexity Low_complexity 1 22 0 9 704 718 299 16 48 chrUextra 15625070 15625379 -13379277 - TIRANT_I LTR Gypsy -6343 1349 1051 9 704 2955 179 8 11 chrUextra 15625574 15626282 -13378374 + SAR_DM Satellite Satellite 198 903 -569 9 704 1853 148 66 23 chrUextra 15626390 15626957 -13377699 - Stalker2_I LTR Gypsy -5577 953 291 9 704 28 48 0 0 chrUextra 15626964 15627006 -13377650 + AT_rich Low_complexity Low_complexity 1 42 0 9 704 28 48 0 0 chrUextra 15627406 15627448 -13377208 + AT_rich Low_complexity Low_complexity 1 42 0 9 704 488 119 36 0 chrUextra 15627721 15627805 -13376851 - NTS_DM Other Other -150 90 4 9 704 331 93 19 0 chrUextra 15628233 15628287 -13376369 - ROVER-I_DM LTR Gypsy -6529 55 1 9 704 1886 86 45 64 chrUextra 15628287 15628661 -13375995 - ROVER-LTR_DM LTR Gypsy 0 367 1 9 704 454 48 0 0 chrUextra 15628661 15628722 -13375934 - CIRCE LINE Composite -1983 4373 4313 9 704 5728 24 10 0 chrUextra 15628826 15629534 -13375122 - R1_DM LINE R1 -1709 3647 2933 9 704 5695 30 6 0 chrUextra 15629634 15630345 -13374311 + R1_DM LINE R1 2757 3471 -1885 9 704 2964 192 13 19 chrUextra 15630450 15631154 -13373502 - SAR_DM Satellite Satellite -620 700 1 9 704 3693 161 65 3 chrUextra 15631259 15631969 -13372687 - Gypsy5_I LTR Gypsy -2574 3935 3182 9 704 2832 187 8 6 chrUextra 15632070 15632731 -13371925 - SAR_DM Satellite Satellite -612 860 199 9 704 614 129 58 0 chrUextra 15632643 15632782 -13371874 + ARS406_DM Unknown Unknown 2 148 -205 9 704 2865 177 18 25 chrUextra 15632882 15633594 -13371062 - SAR_DM Satellite Satellite -321 1151 445 9 704 5941 18 0 0 chrUextra 15633694 15634406 -13370250 - R1_DM LINE R1 -2879 2477 1766 9 704 5918 22 0 0 chrUextra 15634506 15635218 -13369438 - R1_DM LINE R1 -2688 2668 1957 9 704 6079 3 0 0 chrUextra 15635318 15636030 -13368626 + FW_DM LINE Jockey 2776 3487 -1205 9 704 5971 3 3 1 chrUextra 15636130 15636842 -13367814 + ROO_I LTR Pao 4015 4727 -3529 9 704 6039 3 1 4 chrUextra 15636942 15637654 -13367002 + LSU-rRNA_Dme rRNA rRNA 689 1398 -2502 9 704 1280 24 0 6 chrUextra 15637757 15637927 -13366729 - NTS_DM Other Other -34 206 38 9 704 817 0 0 0 chrUextra 15637927 15638023 -13366633 - NTS_DM Other Other -107 133 38 9 704 832 9 9 27 chrUextra 15638023 15638134 -13366522 - NTS_DM Other Other -107 133 25 9 704 22 56 0 0 chrUextra 15638160 15638196 -13366460 + AT_rich Low_complexity Low_complexity 1 36 0 9 704 255 125 0 0 chrUextra 15638209 15638249 -13366407 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 704 246 150 0 0 chrUextra 15638292 15638332 -13366324 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 704 4568 0 2 2 chrUextra 15638566 15639092 -13365564 + LSU-rRNA_Dme rRNA rRNA 3375 3900 0 9 704 22 56 0 0 chrUextra 15639164 15639200 -13365456 + AT_rich Low_complexity Low_complexity 1 36 0 9 704 246 150 0 0 chrUextra 15639205 15639245 -13365411 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 704 6111 0 0 0 chrUextra 15639378 15640090 -13364566 - LSU-rRNA_Dme rRNA rRNA -2702 1198 487 9 704 5749 16 0 4 chrUextra 15640190 15640901 -13363755 + STALKER4_I LTR Gypsy 4445 5152 -1378 9 704 6132 1 0 3 chrUextra 15641001 15641712 -13362944 - DOC LINE Jockey -808 3917 3209 9 704 5120 63 0 4 chrUextra 15641812 15642508 -13362148 + IDEFIX_I LTR Gypsy 2529 3221 -2407 9 704 2550 89 24 6 chrUextra 15642625 15643334 -13361322 - DMSAT6 Satellite Satellite -28 721 1 9 704 1833 185 24 22 chrUextra 15643434 15643887 -13360769 - Stalker2_I LTR Gypsy -6658 744 291 9 704 22 0 0 0 chrUextra 15643914 15643936 -13360720 + AT_rich Low_complexity Low_complexity 1 22 0 9 704 538 108 24 0 chrUextra 15644062 15644145 -13360511 - STALKER4_LTR LTR Gypsy -23 379 295 9 704 6117 1 0 1 chrUextra 15644245 15644956 -13359700 + BURDOCK_I LTR Gypsy 264 973 -4887 9 704 2411 83 34 21 chrUextra 15645867 15646578 -13358078 - DMSAT6 Satellite Satellite -36 720 1 9 704 2486 175 9 10 chrUextra 15646685 15647389 -13357267 - SAR_DM Satellite Satellite -396 703 1 9 704 273 203 0 0 chrUextra 15647679 15647738 -13356918 + FROGGER_I LTR Copia 172 230 -1847 9 704 5811 20 0 0 chrUextra 15648300 15649011 -13355645 + ROO_I LTR Pao 1557 2267 -5989 9 704 6098 0 1 3 chrUextra 15649111 15649819 -13354837 + SSU-rRNA_Dme rRNA rRNA 840 1546 -449 9 704 5002 82 3 1 chrUextra 15649922 15650632 -13354024 - S_DM DNA Tc1 -766 970 260 9 704 4414 59 70 12 chrUextra 15650760 15651444 -13353212 + QUASIMODO_I LTR Gypsy 4249 4972 -1088 9 704 2580 201 23 24 chrUextra 15651544 15652251 -13352405 + SAR_DM Satellite Satellite 1 706 -203 9 704 37 39 0 0 chrUextra 15652405 15652456 -13352200 + AT_rich Low_complexity Low_complexity 1 51 0 9 704 28 48 0 0 chrUextra 15652811 15652853 -13351803 + AT_rich Low_complexity Low_complexity 1 42 0 9 704 2100 173 8 7 chrUextra 15653170 15653874 -13350782 + SAR_DM Satellite Satellite 1 705 -677 9 704 5642 21 28 10 chrUextra 15653977 15654688 -13349968 + FW_DM LINE Jockey 1987 2710 -1982 9 704 2330 65 6 6 chrUextra 15654788 15655113 -13349543 - R1_DM LINE R1 -5031 325 1 9 704 2240 22 153 0 chrUextra 15655146 15655499 -13349157 - R1_DM LINE R1 0 5356 4950 9 704 1982 4 0 0 chrUextra 15655599 15655826 -13348830 - LSU-rRNA_Dme rRNA rRNA -1034 2866 2640 9 704 4153 2 2 2 chrUextra 15655824 15656310 -13348346 - R1_DM LINE R1 0 5356 4871 9 704 2862 187 10 7 chrUextra 15656410 15657083 -13347573 - SAR_DM Satellite Satellite -603 869 195 9 704 799 107 0 0 chrUextra 15656990 15657121 -13347535 + ARS406_DM Unknown Unknown 1 131 -222 9 704 2763 186 14 28 chrUextra 15657223 15657829 -13346827 + SAR_DM Satellite Satellite 1 597 -208 9 704 660 62 0 0 chrUextra 15657836 15657932 -13346724 - ARS406_DM Unknown Unknown -195 158 63 9 704 34 24 0 0 chrUextra 15658169 15658210 -13346446 + AT_rich Low_complexity Low_complexity 1 41 0 9 704 21 95 0 0 chrUextra 15658423 15658486 -13346170 + AT_rich Low_complexity Low_complexity 1 63 0 9 704 1893 0 5 0 chrUextra 15658498 15658719 -13345937 + LSU-rRNA_Dme rRNA rRNA 1 222 -3678 9 704 6156 0 0 0 chrUextra 15658843 15659554 -13345102 + FW_DM LINE Jockey 350 1060 -3632 9 704 6033 10 0 0 chrUextra 15659654 15660365 -13344291 - R1_DM LINE R1 -211 5145 4435 9 704 3125 162 10 20 chrUextra 15660465 15661175 -13343481 - SAR_DM Satellite Satellite -519 953 251 9 704 5749 22 1 1 chrUextra 15661276 15661987 -13342669 + R1_DM LINE R1 3694 4404 -952 9 704 3416 2 2 2 chrUextra 15662096 15662498 -13342158 - STALKER4_LTR LTR Gypsy 0 402 1 9 704 2329 33 3 0 chrUextra 15662498 15662798 -13341858 - FW_DM LINE Jockey -1305 3387 3087 9 704 1148 0 14 0 chrUextra 15662898 15663036 -13341620 - SSU-rRNA_Dme rRNA rRNA -1855 140 1 9 704 32 0 0 0 chrUextra 15663168 15663200 -13341456 + AT_rich Low_complexity Low_complexity 1 32 0 9 704 28 48 0 0 chrUextra 15663528 15663570 -13341086 + AT_rich Low_complexity Low_complexity 1 42 0 9 704 5917 13 0 1 chrUextra 15663709 15664417 -13340239 - Copia2_I LTR Copia -2334 1828 1122 9 704 2865 23 122 0 chrUextra 15664520 15664999 -13339657 + R1_DM LINE R1 4530 5066 -290 9 704 934 35 0 0 chrUextra 15664996 15665110 -13339546 + R1_DM LINE R1 5243 5356 0 9 704 610 68 11 0 chrUextra 15665143 15665231 -13339425 + R1_DM LINE R1 1 89 -5267 9 704 2901 68 98 6 chrUextra 15665333 15665821 -13338835 + Gypsy12_I LTR Gypsy 5009 5541 -5 9 704 955 182 10 29 chrUextra 15665838 15666042 -13338614 + Gypsy12_LTR LTR Gypsy 13 212 -2124 9 704 776 0 0 0 chrUextra 15666142 15666230 -13338426 - MDG1_I LTR Gypsy -6508 88 1 9 704 2946 20 0 0 chrUextra 15666230 15666586 -13338070 - MDG1_LTR LTR Gypsy 0 442 87 9 704 423 100 0 0 chrUextra 15666586 15666656 -13338000 + (TTA)n Simple_repeat Simple_repeat 3 72 0 9 704 1194 51 17 33 chrUextra 15666672 15666853 -13337803 + PROTOP DNA P 406 583 -3897 9 704 6107 7 0 0 chrUextra 15666953 15667664 -13336992 - DMRT1B LINE R1 -4471 712 2 9 704 6091 0 0 0 chrUextra 15667764 15668475 -13336181 - MDG3_I LTR Gypsy -737 4249 3539 9 704 3973 158 10 3 chrUextra 15668575 15669286 -13335370 - Gypsy5_I LTR Gypsy -2351 4158 3443 9 704 1266 87 0 0 chrUextra 15669386 15669594 -13335062 - MDG1_I LTR Gypsy -5255 1341 1134 9 704 2613 93 16 2 chrUextra 15669666 15670097 -13334559 - MDG1_I LTR Gypsy -5458 1138 702 9 704 1388 224 86 39 chrUextra 15670197 15670900 -13333756 + SAR_DM Satellite Satellite 1 736 -208 9 704 2944 36 0 10 chrUextra 15671012 15671404 -13333252 - TRANSIB2 DNA Transib -2447 397 10 9 704 1695 154 93 0 chrUextra 15671407 15671719 -13332937 + DMRT1B LINE R1 3968 4308 -875 9 704 630 12 12 0 chrUextra 15671821 15671904 -13332752 + Copia_I LTR Copia 2934 3017 -1576 9 704 1113 96 22 71 chrUextra 15671904 15672129 -13332527 + BATUMI_LTR LTR Pao 1 214 -58 9 704 1245 75 0 6 chrUextra 15672123 15672296 -13332360 + BATUMI_I LTR Pao 83 254 -7709 9 704 1951 13 0 0 chrUextra 15672294 15672530 -13332126 - DOC2_DM LINE Jockey -1 4792 4557 9 704 2997 185 8 10 chrUextra 15672630 15673338 -13331318 + SAR_DM Satellite Satellite 252 958 -514 9 704 2282 183 92 60 chrUextra 15673455 15674152 -13330504 + Gypsy12_LTR LTR Gypsy 1478 2196 -140 9 704 5442 2 3 0 chrUextra 15674252 15674877 -13329779 + LSU-rRNA_Dme rRNA rRNA 2028 2654 -1246 9 704 764 0 0 0 chrUextra 15674876 15674963 -13329693 + R1_DM LINE R1 3231 3317 -2039 9 704 944 9 9 0 chrUextra 15675874 15675988 -13328668 - NTS_DM Other Other -125 115 1 9 704 1734 21 17 17 chrUextra 15675988 15676228 -13328428 - NTS_DM Other Other 0 240 1 9 704 1408 20 20 20 chrUextra 15676228 15676431 -13328225 - NTS_DM Other Other 0 240 38 9 704 817 0 0 0 chrUextra 15676431 15676527 -13328129 - NTS_DM Other Other -107 133 38 9 704 400 17 17 0 chrUextra 15676527 15676585 -13328071 - NTS_DM Other Other -107 133 75 9 704 5937 13 1 0 chrUextra 15676685 15677396 -13327260 - S_DM DNA Tc1 -258 1478 767 9 704 870 9 0 27 chrUextra 15677512 15677624 -13327032 + NTS_DM Other Other 25 133 -107 9 704 1252 18 0 6 chrUextra 15677624 15677789 -13326867 + NTS_DM Other Other 38 201 -39 9 704 21 57 0 0 chrUextra 15677789 15677824 -13326832 + AT_rich Low_complexity Low_complexity 1 35 0 9 704 806 19 9 27 chrUextra 15677850 15677961 -13326695 + NTS_DM Other Other 25 133 -107 9 704 1438 15 20 20 chrUextra 15677961 15678164 -13326492 + NTS_DM Other Other 38 240 0 9 704 358 23 0 0 chrUextra 15678164 15678207 -13326449 + NTS_DM Other Other 1 43 -197 9 704 4810 90 4 3 chrUextra 15678307 15679018 -13325638 - S_DM DNA Tc1 -349 1387 676 9 704 5887 13 1 3 chrUextra 15679118 15679829 -13324827 - R1_DM LINE R1 -1061 4295 3586 9 704 2987 173 11 14 chrUextra 15679929 15680627 -13324029 + SAR_DM Satellite Satellite 208 903 -569 9 704 740 49 0 10 chrUextra 15680537 15680640 -13324016 - ARS406_DM Unknown Unknown -164 189 88 9 704 5623 18 13 0 chrUextra 15680740 15681451 -13323205 - PROTOP_A DNA P -278 827 108 9 704 2400 195 33 10 chrUextra 15681551 15682262 -13322394 + SAR_DM Satellite Satellite 1 727 -396 9 704 3474 178 0 26 chrUextra 15683182 15683884 -13320772 - HETA LINE telomeric -2479 3602 2919 9 704 2975 0 0 0 chrUextra 15683984 15684344 -13320312 - ROO_I LTR Pao -3163 5093 4734 9 704 2958 0 3 3 chrUextra 15684329 15684695 -13319961 - ROO_I LTR Pao -6127 2129 1764 9 704 2295 92 30 34 chrUextra 15684795 15685505 -13319151 + DMSAT6 Satellite Satellite 1 707 -256 9 704 2141 114 45 40 chrUextra 15685607 15686083 -13318573 + Gypsy12_I LTR Gypsy 427 976 -4570 9 704 407 273 0 0 chrUextra 15686090 15686212 -13318444 + DM297_I LTR Gypsy 3337 3458 -2709 9 704 459 172 10 48 chrUextra 15686212 15686316 -13318340 + Gypsy12_LTR LTR Gypsy 1 100 -2236 9 704 6245 0 1 0 chrUextra 15686417 15687128 -13317528 - R2_DM LINE R2 -1139 2468 1757 9 704 1406 29 6 0 chrUextra 15687228 15687401 -13317255 + NINJA_I LTR Pao 1502 1675 -4336 9 704 4383 26 0 0 chrUextra 15687397 15687939 -13316717 + NINJA_I LTR Pao 1863 2404 -3607 9 704 246 150 0 0 chrUextra 15688105 15688145 -13316511 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 704 246 150 0 0 chrUextra 15688197 15688237 -13316419 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 704 246 150 0 0 chrUextra 15688289 15688329 -13316327 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 704 22 56 0 0 chrUextra 15688334 15688370 -13316286 + AT_rich Low_complexity Low_complexity 1 36 0 9 704 2686 0 0 0 chrUextra 15688442 15688750 -13315906 - LSU-rRNA_Dme rRNA rRNA 0 3900 3593 9 704 4514 25 0 2 chrUextra 15688850 15689410 -13315246 + MAX_I LTR Pao 6818 7376 -538 9 704 895 18 0 0 chrUextra 15689447 15689561 -13315095 + MAX_I LTR Pao 7381 7494 -420 9 704 5185 21 49 17 chrUextra 15689661 15690372 -13314284 - ROO_I LTR Pao -4252 4004 3271 9 704 372 333 24 33 chrUextra 15690482 15690878 -13313778 - Gypsy3_I LTR Gypsy -5228 1784 1218 9 704 5834 25 1 1 chrUextra 15691283 15691994 -13312662 - MDG3_I LTR Gypsy -3757 1229 519 9 704 1736 38 8 29 chrUextra 15692113 15692359 -13312297 + BATUMI_LTR LTR Pao 32 272 0 9 704 2397 113 18 12 chrUextra 15692934 15693616 -13311040 + DMSAT6 Satellite Satellite 1 686 0 9 704 6178 1 0 0 chrUextra 15693718 15694427 -13310229 - ROO_I LTR Pao -644 7612 6904 9 704 2201 105 25 13 chrUextra 15694527 15695238 -13309418 + DMSAT6 Satellite Satellite 1 720 -46 9 704 5998 0 3 1 chrUextra 15695338 15696049 -13308607 + ROO_I LTR Pao 6657 7368 -888 9 704 2338 36 3 0 chrUextra 15696169 15696472 -13308184 + QUASIMODO_I LTR Gypsy 1824 2127 -3933 9 704 2615 49 122 0 chrUextra 15696475 15696860 -13307796 + QUASIMODO_I LTR Gypsy 2284 2715 -3345 9 704 1612 19 14 5 chrUextra 15697773 15697986 -13306670 - NTS_DM Other Other -25 215 1 9 704 1847 4 17 13 chrUextra 15697986 15698225 -13306431 - NTS_DM Other Other 0 240 1 9 704 1811 13 17 13 chrUextra 15698225 15698464 -13306192 - NTS_DM Other Other 0 240 1 9 704 5274 0 2 0 chrUextra 15698692 15699293 -13305363 - LSU-rRNA_Dme rRNA rRNA 0 3900 3299 9 704 3053 177 11 10 chrUextra 15699396 15700104 -13304552 + SAR_DM Satellite Satellite 229 937 -535 9 704 464 0 0 0 chrUextra 15700204 15700257 -13304399 - NTS_DM Other Other -150 90 38 9 704 870 9 0 27 chrUextra 15700257 15700369 -13304287 - NTS_DM Other Other -107 133 25 9 704 22 56 0 0 chrUextra 15700395 15700431 -13304225 + AT_rich Low_complexity Low_complexity 1 36 0 9 704 255 125 0 0 chrUextra 15700444 15700484 -13304172 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 704 246 150 0 0 chrUextra 15700527 15700567 -13304089 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 704 246 150 0 0 chrUextra 15700619 15700659 -13303997 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 704 246 150 0 0 chrUextra 15700711 15700751 -13303905 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 704 246 150 0 0 chrUextra 15700803 15700843 -13303813 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 704 29 28 0 0 chrUextra 15700848 15700884 -13303772 + AT_rich Low_complexity Low_complexity 1 36 0 9 704 413 7 93 43 chrUextra 15701032 15701172 -13303484 + (TC)n Simple_repeat Simple_repeat 2 148 0 9 704 291 232 0 0 chrUextra 15702025 15702094 -13302562 - BS2 LINE Jockey -507 4214 4146 9 704 309 0 0 0 chrUextra 15702248 15702287 -13302369 - DIVER2_I LTR Pao -366 3781 3743 9 704 1526 29 0 99 chrUextra 15702285 15702518 -13302138 - DIVER2_I LTR Pao -2572 1575 1366 9 704 690 0 0 0 chrUextra 15702637 15702717 -13301939 - Gypsy6_LTR LTR Gypsy -327 80 1 9 704 5336 13 2 0 chrUextra 15702719 15703348 -13301308 - Gypsy6_I LTR Gypsy 0 7012 6383 9 704 245 125 46 15 chrUextra 15703705 15703770 -13300886 + (TAA)n Simple_repeat Simple_repeat 2 68 0 9 704 22 35 0 0 chrUextra 15703964 15703993 -13300663 + AT_rich Low_complexity Low_complexity 1 29 0 9 704 28 48 0 0 chrUextra 15704411 15704453 -13300203 + AT_rich Low_complexity Low_complexity 1 42 0 9 704 32 0 0 0 chrUextra 15704782 15704814 -13299842 + AT_rich Low_complexity Low_complexity 1 32 0 9 704 34 24 0 0 chrUextra 15705145 15705186 -13299470 + AT_rich Low_complexity Low_complexity 1 41 0 9 704 5866 22 0 1 chrUextra 15705881 15706592 -13298064 + R1_DM LINE R1 1937 2646 -2710 9 704 3037 176 11 10 chrUextra 15706692 15707396 -13297260 + SAR_DM Satellite Satellite 254 958 -514 9 704 23 50 0 48 chrUextra 15707739 15707802 -13296854 + AT_rich Low_complexity Low_complexity 1 60 0 9 704 456 125 0 48 chrUextra 15707886 15707970 -13296686 + Baggins1 LINE LOA 5036 5115 -338 9 704 508 83 36 0 chrUextra 15707935 15708019 -13296637 - FB4_DM DNA Tc1 -3676 413 327 9 704 1520 52 0 0 chrUextra 15708022 15708214 -13296442 + Jockey2 LINE Jockey 2530 2721 -707 9 704 6047 11 0 0 chrUextra 15708314 15709025 -13295631 + Invader3_I LTR Gypsy 3596 4306 -582 9 704 2960 174 13 25 chrUextra 15709125 15709831 -13294825 + SAR_DM Satellite Satellite 422 1118 -354 9 704 27 29 0 0 chrUextra 15710197 15710231 -13294425 + AT_rich Low_complexity Low_complexity 1 34 0 9 704 1194 23 175 0 chrUextra 15710470 15710647 -13294009 + Baggins1 LINE LOA 4727 4934 -519 9 704 5344 30 56 3 chrUextra 15710747 15711458 -13293198 - NINJA_I LTR Pao -551 5460 4712 9 704 46 0 0 0 chrUextra 15711895 15711941 -13292715 + AT_rich Low_complexity Low_complexity 1 46 0 9 704 428 83 0 0 chrUextra 15712369 15712441 -13292215 + NTS_DM Other Other 66 137 -103 9 704 425 127 53 38 chrUextra 15712449 15712580 -13292076 + NTS_DM Other Other 108 240 0 9 704 277 106 21 0 chrUextra 15712580 15712627 -13292029 + NTS_DM Other Other 1 48 -192 9 704 987 144 20 5 chrUextra 15712718 15712920 -13291736 + NTS_DM Other Other 1 205 -35 9 704 273 125 21 0 chrUextra 15712951 15712999 -13291657 + NTS_DM Other Other 1 49 -191 9 704 5981 11 1 0 chrUextra 15713180 15713891 -13290765 - Gypsy4_I LTR Gypsy -4672 1616 905 9 704 262 191 43 43 chrUextra 15714005 15714120 -13290536 + A-rich Low_complexity Low_complexity 3 117 0 9 704 1537 288 5 6 chrUextra 15714156 15714702 -13289954 + ROVER-I_DM LTR Gypsy 514 1396 -5188 9 704 6126 3 0 3 chrUextra 15714803 15715513 -13289143 + R2_DM LINE R2 2764 3471 -136 9 704 5970 10 1 0 chrUextra 15715613 15716320 -13288336 - R1_DM LINE R1 -4568 788 81 9 704 2380 126 86 3 chrUextra 15716424 15717135 -13287521 + BATUMI_I LTR Pao 4140 4988 -2975 9 704 6134 6 0 0 chrUextra 15717235 15717946 -13286710 + R1_DM LINE R1 1889 2599 -2757 9 704 6178 0 0 1 chrUextra 15718046 15718757 -13285899 - DOC LINE Jockey -788 3937 3228 9 704 51 31 0 0 chrUextra 15719032 15719097 -13285559 + AT_rich Low_complexity Low_complexity 1 65 0 9 704 22 35 0 0 chrUextra 15719273 15719302 -13285354 + AT_rich Low_complexity Low_complexity 1 29 0 9 704 23 0 0 0 chrUextra 15719692 15719715 -13284941 + AT_rich Low_complexity Low_complexity 1 23 0 9 704 475 132 0 0 chrUextra 15720482 15720558 -13284098 - NTS_DM Other Other -164 76 1 9 704 280 104 21 0 chrUextra 15720648 15720696 -13283960 - NTS_DM Other Other -191 49 1 9 704 1062 150 29 21 chrUextra 15720696 15720934 -13283722 - NTS_DM Other Other 0 240 1 9 704 270 125 21 0 chrUextra 15721018 15721066 -13283590 - NTS_DM Other Other -191 49 1 9 704 2517 206 14 21 chrUextra 15721290 15721995 -13282661 + SAR_DM Satellite Satellite 465 1164 -308 9 704 468 132 36 0 chrUextra 15722101 15722184 -13282472 - NTS_DM Other Other -151 89 4 9 704 1355 6 0 18 chrUextra 15722294 15722459 -13282197 - NTS_DM Other Other -78 162 1 9 704 1926 4 17 13 chrUextra 15722459 15722698 -13281958 - NTS_DM Other Other 0 240 1 9 704 794 0 35 26 chrUextra 15722698 15722812 -13281844 - NTS_DM Other Other 0 240 126 9 704 6057 14 0 4 chrUextra 15722912 15723623 -13281033 - IDEFIX_I LTR Gypsy -2337 3291 2584 9 704 21 0 0 0 chrUextra 15724176 15724197 -13280459 + AT_rich Low_complexity Low_complexity 1 21 0 9 704 6347 4 0 1 chrUextra 15724534 15725245 -13279411 + STALKER4_I LTR Gypsy 3482 4191 -2339 9 704 6053 28 1 0 chrUextra 15725345 15726056 -13278600 - MAX_I LTR Pao -2386 5528 4817 9 704 6239 24 0 1 chrUextra 15726156 15726867 -13277789 - MAX_I LTR Pao -913 7001 6292 9 704 946 178 102 15 chrUextra 15727416 15727621 -13277035 + DMLTR5 LTR Gypsy 44 266 0 9 704 366 35 69 17 chrUextra 15727620 15727678 -13276978 + HMSBEAGLE_I LTR Gypsy 1 61 -6468 9 704 741 111 0 0 chrUextra 15727778 15727895 -13276761 - ARS406_DM Unknown Unknown -236 117 1 9 704 3178 174 12 10 chrUextra 15727802 15728486 -13276170 + SAR_DM Satellite Satellite 195 879 -593 9 10 4911 66 1 5 chrUextra 15728592 15729300 -13275356 + G_DM LINE Jockey 815 1515 -527 9 705 1449 0 0 0 chrUextra 15729400 15729561 -13275095 + (GAGAA)n Simple_repeat Simple_repeat 4 164 0 9 705 3059 173 15 8 chrUextra 15730211 15730922 -13273734 - SAR_DM Satellite Satellite -685 715 1 9 705 599 55 0 0 chrUextra 15731022 15731095 -13273561 + R1_DM LINE R1 1318 1390 -3966 9 705 5230 31 22 0 chrUextra 15731096 15731733 -13272923 - FW_DM LINE Jockey -4 4688 4038 9 705 6103 18 4 1 chrUextra 15731833 15732542 -13272114 - R1_DM LINE R1 -817 4539 3829 9 705 1538 22 0 0 chrUextra 15732644 15732823 -13271833 - SSU-rRNA_Dme rRNA rRNA -1816 179 1 9 705 31 0 0 0 chrUextra 15732956 15732987 -13271669 + AT_rich Low_complexity Low_complexity 1 31 0 9 705 27 49 0 0 chrUextra 15733314 15733355 -13271301 + AT_rich Low_complexity Low_complexity 1 41 0 9 705 6324 4 0 1 chrUextra 15733455 15734166 -13270490 + DM176_I LTR Gypsy 2700 3409 -3011 9 705 6064 30 0 1 chrUextra 15734268 15734977 -13269679 + MAX_I LTR Pao 4189 4896 -3018 9 705 903 0 10 0 chrUextra 15736699 15736802 -13267854 + SSU-rRNA_Dme rRNA rRNA 1892 1995 0 9 705 4107 10 41 2 chrUextra 15737510 15738003 -13266653 + IDEFIX_LTR LTR Gypsy 83 594 0 9 705 25 0 0 0 chrUextra 15738193 15738218 -13266438 + AT_rich Low_complexity Low_complexity 1 25 0 9 705 390 159 53 38 chrUextra 15738357 15738488 -13266168 + NTS_DM Other Other 108 240 0 9 705 324 83 21 0 chrUextra 15738488 15738536 -13266120 + NTS_DM Other Other 1 49 -191 9 705 909 109 0 0 chrUextra 15738626 15738763 -13265893 + NTS_DM Other Other 1 137 -103 9 705 390 159 53 38 chrUextra 15738771 15738902 -13265754 + NTS_DM Other Other 108 240 0 9 705 310 104 21 0 chrUextra 15738902 15738950 -13265706 + NTS_DM Other Other 1 49 -191 9 705 5982 17 0 0 chrUextra 15739943 15740654 -13264002 + MDG1_I LTR Gypsy 4886 5596 -1000 9 705 6441 3 1 0 chrUextra 15740754 15741465 -13263191 + LSU-rRNA_Dme rRNA rRNA 2113 2824 -1076 9 705 4494 17 0 0 chrUextra 15741565 15742085 -13262571 + PROTOP DNA P 3961 4480 0 9 705 440 135 292 0 chrUextra 15742085 15742169 -13262487 - Gypsy12_I LTR Gypsy -972 4574 4465 9 705 783 109 9 0 chrUextra 15742166 15742276 -13262380 - Gypsy12_I LTR Gypsy -3725 1821 1711 9 705 6183 20 1 0 chrUextra 15742376 15743087 -13261569 - R1_DM LINE R1 -3023 2333 1622 9 705 354 261 84 74 chrUextra 15743187 15743390 -13261266 + GTWIN_LTR LTR Gypsy 201 405 -90 9 705 26 88 0 0 chrUextra 15743668 15743736 -13260920 + AT_rich Low_complexity Low_complexity 1 68 0 9 705 22 0 0 0 chrUextra 15743778 15743800 -13260856 + AT_rich Low_complexity Low_complexity 1 22 0 9 705 5901 1 0 35 chrUextra 15743998 15744709 -13259947 - LSU-rRNA_Dme rRNA rRNA -3088 812 127 9 705 5988 0 1 1 chrUextra 15744809 15745520 -13259136 + TRANSPAC_I LTR Gypsy 3212 3922 -668 9 705 5200 48 65 13 chrUextra 15745620 15746331 -13258325 - BATUMI_I LTR Pao -4345 3618 2871 9 705 6235 1 3 0 chrUextra 15746431 15747142 -13257514 + ROO_I LTR Pao 3785 4497 -3759 9 705 3202 16 3 0 chrUextra 15747242 15747610 -13257046 - STALKER4_LTR LTR Gypsy -33 369 1 9 705 2522 18 9 12 chrUextra 15747610 15747953 -13256703 - STALKER4_I LTR Gypsy 0 6530 6189 9 705 3216 172 11 13 chrUextra 15748053 15748748 -13255908 - SAR_DM Satellite Satellite -587 885 192 9 705 684 108 9 0 chrUextra 15748653 15748764 -13255892 + ARS406_DM Unknown Unknown 1 112 -241 9 705 6299 8 0 1 chrUextra 15748864 15749575 -13255081 - DMRT1B LINE R1 -317 4866 4157 9 705 3087 194 25 19 chrUextra 15749675 15750386 -13254270 - SAR_DM Satellite Satellite -613 715 1 9 705 6233 1 0 0 chrUextra 15750486 15751197 -13253459 - STALKER4_I LTR Gypsy -4547 1983 1273 9 705 715 179 14 14 chrUextra 15751475 15751622 -13253034 - HETRP_DM Satellite Satellite -197 1675 1529 9 705 703 186 14 14 chrUextra 15751755 15751902 -13252754 - HETRP_DM Satellite Satellite -197 1675 1529 9 705 5931 34 8 0 chrUextra 15752108 15752819 -13251837 + R1_DM LINE R1 2239 2955 -2401 9 705 46 45 0 0 chrUextra 15753323 15753390 -13251266 + AT_rich Low_complexity Low_complexity 1 67 0 9 705 260 105 0 0 chrUextra 15753403 15753441 -13251215 - Invader5_LTR LTR Gypsy 0 352 315 9 705 1525 37 5 0 chrUextra 15753440 15753630 -13251026 + DMCR1A LINE CR1 1189 1379 -3091 9 705 6063 28 0 1 chrUextra 15753730 15754441 -13250215 + R1_DM LINE R1 4205 4914 -442 9 705 28 48 0 0 chrUextra 15754636 15754678 -13249978 + AT_rich Low_complexity Low_complexity 1 42 0 9 705 32 0 0 0 chrUextra 15755006 15755038 -13249618 + AT_rich Low_complexity Low_complexity 1 32 0 9 705 656 13 0 13 chrUextra 15755172 15755251 -13249405 + SSU-rRNA_Dme rRNA rRNA 2 79 -1916 9 705 752 118 0 8 chrUextra 15755352 15755480 -13249176 - ARS406_DM Unknown Unknown -226 127 1 9 705 3151 176 7 7 chrUextra 15755389 15756063 -13248593 + SAR_DM Satellite Satellite 197 870 -602 9 705 2980 223 7 7 chrUextra 15756164 15756873 -13247783 + Stalker2_I LTR Gypsy 5255 5963 -1439 9 705 6163 27 0 0 chrUextra 15756974 15757685 -13246971 + R1_DM LINE R1 3946 4656 -700 9 705 1427 17 0 6 chrUextra 15758321 15758496 -13246160 + (TTCTC)n Simple_repeat Simple_repeat 2 175 0 9 705 6367 4 0 0 chrUextra 15758596 15759307 -13245349 + DMRT1B LINE R1 4248 4958 -225 9 705 6195 0 0 0 chrUextra 15760225 15760929 -13243727 + DM412 LTR Gypsy 2970 3673 -3224 9 705 3825 63 42 23 chrUextra 15761074 15761740 -13242916 - PROTOP_A DNA P 0 1153 529 9 705 3542 158 10 9 chrUextra 15761845 15762537 -13242119 - SAR_DM Satellite Satellite -411 1061 369 9 705 861 0 0 0 chrUextra 15762651 15762750 -13241906 - Invader2_I LTR Gypsy -3874 718 620 9 705 4814 0 30 0 chrUextra 15762750 15763292 -13241364 + ACCORD_LTR LTR Gypsy 1 558 0 9 705 645 0 0 0 chrUextra 15763292 15763362 -13241294 + ACCORD_I LTR Gypsy 1 70 -6218 9 705 21 57 0 0 chrUextra 15763629 15763664 -13240992 + AT_rich Low_complexity Low_complexity 1 35 0 9 705 2067 8 0 0 chrUextra 15763664 15763904 -13240752 + ALUII_DM Unknown Unknown 1 240 0 9 705 4633 35 0 0 chrUextra 15764273 15764818 -13239838 - R1_DM LINE R1 -3495 1861 1317 9 705 1493 18 0 0 chrUextra 15764816 15764984 -13239672 - R1_DM LINE R1 -3528 1828 1661 9 705 5911 37 13 3 chrUextra 15765084 15765795 -13238861 - R1_DM LINE R1 -3306 2050 1333 9 705 4474 0 2 0 chrUextra 15765895 15766425 -13238231 + ROO_I LTR Pao 7726 8256 0 9 705 1631 0 0 0 chrUextra 15766425 15766606 -13238050 + ROO_LTR LTR Pao 1 181 -247 9 705 6378 0 4 3 chrUextra 15766706 15767417 -13237239 - SSU-rRNA_Dme rRNA rRNA -167 1828 1117 9 705 3572 255 17 28 chrUextra 15768328 15769846 -13234810 + SAR_DM Satellite Satellite 1 1501 -353 9 705 2090 127 49 148 chrUextra 15769950 15770661 -13233995 - BATUMI_I LTR Pao -6859 1104 464 9 705 1134 0 0 0 chrUextra 15770761 15770887 -13233769 + (CACAA)n Simple_repeat Simple_repeat 2 127 0 9 705 3390 0 0 0 chrUextra 15771103 15771472 -13233184 + DMRT1B LINE R1 1 369 -4814 9 705 968 142 68 6 chrUextra 15771572 15771749 -13232907 - HETA LINE telomeric -213 5868 5681 9 705 416 127 90 9 chrUextra 15771724 15771835 -13232821 - TART LINE telomeric -4831 9646 9527 9 705 58 15 0 0 chrUextra 15772037 15772102 -13232554 + AT_rich Low_complexity Low_complexity 1 65 0 9 705 1572 246 53 48 chrUextra 15772393 15773073 -13231583 + SAR_DM Satellite Satellite 1 683 -243 9 705 287 216 61 53 chrUextra 15772957 15773089 -13231567 - XDMR Unknown Unknown 0 361 229 9 705 6079 10 4 0 chrUextra 15773194 15773905 -13230751 + PROTOP DNA P 3020 3733 -747 9 705 3089 174 14 27 chrUextra 15774006 15774710 -13229946 + SAR_DM Satellite Satellite 424 1118 -354 9 705 3432 172 60 14 chrUextra 15774816 15775524 -13229132 - SAR_DM Satellite Satellite -426 740 1 9 705 593 92 35 0 chrUextra 15775918 15776005 -13228651 - NTS_DM Other Other -150 90 1 9 705 1527 29 23 19 chrUextra 15776005 15776219 -13228437 - NTS_DM Other Other 0 240 26 9 705 263 0 0 0 chrUextra 15776438 15776469 -13228187 + NTS_DM Other Other 171 201 -39 9 705 1560 19 18 32 chrUextra 15776521 15776740 -13227916 + NTS_DM Other Other 25 240 0 9 705 959 9 0 0 chrUextra 15776740 15776847 -13227809 + NTS_DM Other Other 1 107 -133 9 705 4290 47 39 8 chrUextra 15777249 15777960 -13226696 + PROTOP DNA P 146 753 -3727 9 705 184 22 87 22 chrUextra 15778725 15778771 -13225885 + (GA)n Simple_repeat Simple_repeat 1 49 0 9 705 2083 197 35 7 chrUextra 15778871 15779301 -13225355 - HETA LINE telomeric -1620 4461 4020 9 705 22 56 0 0 chrUextra 15779451 15779487 -13225169 + AT_rich Low_complexity Low_complexity 1 36 0 9 705 5399 12 0 2 chrUextra 15779682 15780279 -13224377 + DOC2_DM LINE Jockey 3217 3812 -981 9 705 978 9 0 0 chrUextra 15780280 15780391 -13224265 + DOC2_DM LINE Jockey 3939 4049 -744 9 705 327 26 0 0 chrUextra 15781164 15781202 -13223454 + DNAREP1_DM LINE Penelope 2 39 -555 9 705 6141 21 4 0 chrUextra 15781302 15782012 -13222644 + R1_DM LINE R1 2610 3322 -2034 9 705 3473 3 5 3 chrUextra 15782112 15782500 -13222156 + LSU-rRNA_Dme rRNA rRNA 1403 1791 -2109 9 705 2584 4 4 0 chrUextra 15782541 15782822 -13221834 + LSU-rRNA_Dme rRNA rRNA 1788 2069 -1831 9 705 2229 0 0 0 chrUextra 15782922 15783160 -13221496 - LSU-rRNA_Dme rRNA rRNA -1875 2025 1788 9 705 3783 5 5 7 chrUextra 15783201 15783632 -13221024 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1362 9 705 6230 8 0 1 chrUextra 15783732 15784442 -13220214 + DM297_I LTR Gypsy 4438 5146 -1021 9 705 269 0 31 0 chrUextra 15784542 15784574 -13220082 - NTS_DM Other Other -207 33 1 9 705 1992 4 17 13 chrUextra 15784574 15784813 -13219843 - NTS_DM Other Other 0 240 1 9 705 1988 4 17 13 chrUextra 15784813 15785052 -13219604 - NTS_DM Other Other 0 240 1 9 705 1576 5 20 20 chrUextra 15785052 15785252 -13219404 - NTS_DM Other Other 0 240 41 9 705 1908 0 18 13 chrUextra 15785352 15785581 -13219075 + NTS_DM Other Other 11 240 0 9 705 1974 8 17 13 chrUextra 15785581 15785820 -13218836 + NTS_DM Other Other 1 240 0 9 705 1975 8 17 13 chrUextra 15785820 15786059 -13218597 + NTS_DM Other Other 1 240 0 9 705 6454 1 1 0 chrUextra 15786162 15786872 -13217784 + R1_DM LINE R1 1428 2138 -3218 9 705 579 46 35 0 chrUextra 15789215 15789302 -13215354 + (GAGAA)n Simple_repeat Simple_repeat 4 93 0 9 705 6547 1 0 3 chrUextra 15789402 15790112 -13214544 + LSU-rRNA_Dme rRNA rRNA 1825 2532 -1368 9 705 2476 256 30 18 chrUextra 15790212 15790921 -13213735 - TOM_I LTR Gypsy -834 5278 4562 9 705 2274 144 8 0 chrUextra 15791022 15791389 -13213267 + HMSBEAGLE_I LTR Gypsy 2085 2454 -4075 9 705 1792 191 21 9 chrUextra 15791393 15791731 -13212925 + HMSBEAGLE_I LTR Gypsy 2422 2763 -3766 9 705 5476 28 69 6 chrUextra 15792642 15793352 -13211304 - R1_DM LINE R1 -919 4437 3683 9 705 3405 173 14 11 chrUextra 15793452 15794161 -13210495 + SAR_DM Satellite Satellite 298 1008 -464 9 705 2758 206 20 20 chrUextra 15794282 15794972 -13209684 - SAR_DM Satellite Satellite -354 1118 429 9 705 3232 29 3 3 chrUextra 15795072 15795455 -13209201 + IDEFIX_LTR LTR Gypsy 195 577 -17 9 705 2805 28 0 3 chrUextra 15795453 15795782 -13208874 + IDEFIX_I LTR Gypsy 1837 2164 -3464 9 705 6254 14 3 1 chrUextra 15795882 15796592 -13208064 + QUASIMODO_I LTR Gypsy 2429 3139 -2921 9 705 2519 87 18 28 chrUextra 15796693 15797402 -13207254 - DMSAT6 Satellite Satellite -23 701 1 9 705 6193 19 0 11 chrUextra 15797502 15798212 -13206444 - FW_DM LINE Jockey -2230 2462 1761 9 705 3126 181 16 10 chrUextra 15798315 15799002 -13205654 - SAR_DM Satellite Satellite -615 857 167 9 705 909 101 0 7 chrUextra 15798882 15799022 -13205634 + ARS406_DM Unknown Unknown 1 139 -214 9 705 6164 28 0 1 chrUextra 15799122 15799831 -13204825 + R1_DM LINE R1 1397 2104 -3252 9 705 2481 0 4 0 chrUextra 15799932 15800200 -13204456 - LSU-rRNA_Dme rRNA rRNA -1844 2056 1788 9 705 3489 5 5 8 chrUextra 15800241 15800642 -13204014 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1392 9 705 3870 16 2 5 chrUextra 15800744 15801186 -13203470 + DIVER2_I LTR Pao 2632 3072 -1075 9 705 2033 88 0 0 chrUextra 15801180 15801452 -13203204 - ACCORD2_I LTR Gypsy -3218 3994 3723 9 705 6543 3 1 0 chrUextra 15801552 15802262 -13202394 + DOC LINE Jockey 3145 3855 -870 9 705 6391 7 0 1 chrUextra 15802365 15803072 -13201584 + R1_DM LINE R1 3905 4610 -746 9 705 6364 22 0 0 chrUextra 15803982 15804692 -13199964 + DIVER_I LTR Pao 1892 2601 -3042 9 705 4206 2 4 0 chrUextra 15804792 15805244 -13199412 - SSU-rRNA_Dme rRNA rRNA -1541 454 1 9 705 32 0 0 0 chrUextra 15805376 15805408 -13199248 + AT_rich Low_complexity Low_complexity 1 32 0 9 705 6022 34 1 4 chrUextra 15805602 15806312 -13198344 - MAX_I LTR Pao -4675 3239 2532 9 705 3031 176 14 21 chrUextra 15806412 15807122 -13197534 - SAR_DM Satellite Satellite -649 705 1 9 705 3126 170 7 34 chrUextra 15807222 15807922 -13196734 + SAR_DM Satellite Satellite 438 1118 -354 9 705 363 156 42 62 chrUextra 15807836 15807932 -13196724 - XDMR_DM Unknown Unknown 0 360 267 9 705 5966 23 8 14 chrUextra 15808032 15808742 -13195914 + BATUMI_I LTR Pao 974 1679 -6284 9 705 32 0 0 0 chrUextra 15809155 15809187 -13195469 + AT_rich Low_complexity Low_complexity 1 32 0 9 705 2163 4 0 0 chrUextra 15809319 15809552 -13195104 + SSU-rRNA_Dme rRNA rRNA 1 233 -1762 9 705 960 323 13 15 chrUextra 15809653 15810046 -13194610 - HMSBEAGLE_I LTR Gypsy -4698 1831 1440 9 705 6286 3 1 1 chrUextra 15810462 15811172 -13193484 + R1_DM LINE R1 630 1339 -4017 9 705 6457 0 1 0 chrUextra 15811272 15811982 -13192674 - ROO_I LTR Pao -4911 3345 2635 9 705 4427 63 0 2 chrUextra 15812082 15812658 -13191998 - BATUMI_I LTR Pao -86 7877 7303 9 705 912 45 0 0 chrUextra 15812681 15812792 -13191864 + BATUMI_I LTR Pao 6427 6537 -1426 9 705 4472 2 0 0 chrUextra 15812892 15813373 -13191283 + NOMAD_I LTR Gypsy 6092 6572 0 9 705 1039 52 34 6 chrUextra 15813373 15813602 -13191054 + NOMAD_LTR LTR Gypsy 1 266 -252 9 705 4455 25 0 0 chrUextra 15813702 15814214 -13190442 - R1_DM LINE R1 -1719 3637 3126 9 705 1773 0 0 0 chrUextra 15814214 15814412 -13190244 + ACCORD_LTR LTR Gypsy 1 198 -360 9 705 3386 183 8 8 chrUextra 15814512 15815222 -13189434 + SAR_DM Satellite Satellite 293 1002 -470 9 705 224 185 31 0 chrUextra 15815591 15815656 -13189000 + (TTA)n Simple_repeat Simple_repeat 2 68 0 9 705 22 35 0 0 chrUextra 15815943 15815972 -13188684 + AT_rich Low_complexity Low_complexity 1 29 0 9 705 1784 209 73 14 chrUextra 15816133 15816840 -13187816 - SAR_DM Satellite Satellite -796 748 1 9 705 2002 5 0 0 chrUextra 15816942 15817164 -13187492 - DMRT1A LINE R1 -3597 1586 1365 9 705 3319 99 17 11 chrUextra 15817184 15817652 -13187004 + Gypsy12_I LTR Gypsy 835 1305 -4241 9 705 5482 40 22 3 chrUextra 15817752 15818462 -13186194 - R1_DM LINE R1 -4163 1193 470 9 705 2345 0 0 4 chrUextra 15818562 15818818 -13185838 + LSU-rRNA_Dme rRNA rRNA 3646 3900 0 9 705 268 196 0 19 chrUextra 15818919 15818971 -13185685 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 705 268 196 0 19 chrUextra 15819011 15819063 -13185593 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 705 268 196 0 19 chrUextra 15819103 15819155 -13185501 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 705 278 176 0 19 chrUextra 15819186 15819238 -13185418 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 705 268 196 0 19 chrUextra 15820251 15820303 -13184353 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 705 4662 0 19 2 chrUextra 15820364 15820892 -13183764 + G_DM LINE Jockey 1 537 -3809 9 705 396 107 0 0 chrUextra 15820992 15821048 -13183608 - Gypsy12_I LTR Gypsy -3988 1558 1503 9 705 4641 90 1 20 chrUextra 15821055 15821702 -13182954 - Gypsy12_I LTR Gypsy -3992 1554 920 9 705 3568 0 0 0 chrUextra 15822612 15822991 -13181665 - ROO_LTR LTR Pao -49 379 1 9 705 742 177 12 18 chrUextra 15822992 15823322 -13181334 + SAR_DM Satellite Satellite 1 328 -1045 9 705 6391 3 0 0 chrUextra 15823422 15824132 -13180524 + ROO_I LTR Pao 4683 5392 -2864 9 705 2654 208 23 28 chrUextra 15824232 15824940 -13179716 + SAR_DM Satellite Satellite 478 1181 -291 9 705 3487 27 84 0 chrUextra 15825042 15825752 -13178904 + R1_DM LINE R1 4438 5207 -149 9 705 3116 35 18 28 chrUextra 15825852 15826560 -13178096 + Gypsy12_I LTR Gypsy 208 966 -4580 9 705 594 14 14 0 chrUextra 15826662 15826733 -13177923 + ACCORD2_LTR LTR Gypsy 143 214 -1 9 705 5437 30 2 0 chrUextra 15826734 15827372 -13177284 + R1_DM LINE R1 2422 3060 -2296 9 705 3323 112 39 94 chrUextra 15827472 15828182 -13176474 + PROTOP_B DNA P 372 1042 -111 9 705 6562 1 1 1 chrUextra 15828282 15828992 -13175664 - SSU-rRNA_Dme rRNA rRNA -728 1267 558 9 705 3272 182 12 7 chrUextra 15829920 15830612 -13174044 - SAR_DM Satellite Satellite -396 1076 382 9 705 307 0 77 58 chrUextra 15830715 15830767 -13173889 + NTS_DM Other Other 188 240 0 9 705 1401 6 0 18 chrUextra 15830767 15830932 -13173724 + NTS_DM Other Other 1 162 -78 9 705 534 119 36 0 chrUextra 15831042 15831126 -13173530 + NTS_DM Other Other 4 90 -150 9 705 404 183 11 11 chrUextra 15831522 15831616 -13173040 + XDMR_DM Unknown Unknown 267 360 0 9 705 3306 171 26 20 chrUextra 15831532 15832232 -13172424 - SAR_DM Satellite Satellite -354 1118 415 9 705 6045 6 0 0 chrUextra 15832334 15833042 -13171614 - QUASIMODO_I LTR Gypsy -366 5694 4987 9 705 3120 187 9 9 chrUextra 15833149 15833850 -13170806 - SAR_DM Satellite Satellite -535 937 237 9 705 1411 10 112 15 chrUextra 15833952 15834148 -13170508 + TAHRE LINE telomeric 952 1166 -9297 9 705 3797 26 120 6 chrUextra 15834163 15834662 -13169994 + DOC2_DM LINE Jockey 7 562 -4231 9 705 1176 42 115 77 chrUextra 15834762 15834971 -13169685 + PROTOP_B DNA P 720 936 -217 9 705 293 50 0 0 chrUextra 15834964 15835024 -13169632 + PROTOP_B DNA P 572 631 -522 9 705 2392 58 13 0 chrUextra 15835029 15835342 -13169314 + PROTOP_B DNA P 794 1110 -43 9 705 605 137 206 0 chrUextra 15835339 15835470 -13169186 - DMCR1A LINE CR1 -1125 3345 3188 9 705 518 124 45 0 chrUextra 15835572 15835661 -13168995 - DM176_I LTR Gypsy -3687 2733 2641 9 705 896 86 56 21 chrUextra 15835668 15835811 -13168845 - DM176_I LTR Gypsy -3913 2507 2360 9 705 372 88 0 0 chrUextra 15835839 15835896 -13168760 + (TAA)n Simple_repeat Simple_repeat 3 59 0 9 705 1990 91 74 3 chrUextra 15835898 15836197 -13168459 + MDG1_LTR LTR Gypsy 94 413 -29 9 705 5965 30 6 0 chrUextra 15836382 15837092 -13167564 + R1_DM LINE R1 2822 3535 -1821 9 705 5906 24 1 4 chrUextra 15837192 15837902 -13166754 - G_DM LINE Jockey -1466 2880 2173 9 705 6017 1 0 1 chrUextra 15838002 15838711 -13165945 + ACCORD_I LTR Gypsy 5251 5958 -330 9 705 3198 132 29 68 chrUextra 15838817 15839521 -13165135 - Gypsy8_I LTR Gypsy -2816 1531 1035 9 705 693 12 0 0 chrUextra 15839622 15839704 -13164952 + R1_DM LINE R1 4985 5066 -290 9 705 941 53 0 0 chrUextra 15839701 15839815 -13164841 + R1_DM LINE R1 5243 5356 0 9 705 3718 66 8 4 chrUextra 15839848 15840332 -13164324 + R1_DM LINE R1 1 486 -4870 9 705 22 35 0 0 chrUextra 15840467 15840496 -13164160 + AT_rich Low_complexity Low_complexity 1 29 0 9 705 37 39 0 0 chrUextra 15840597 15840648 -13164008 + AT_rich Low_complexity Low_complexity 1 51 0 9 705 28 48 0 0 chrUextra 15841003 15841045 -13163611 + AT_rich Low_complexity Low_complexity 1 42 0 9 705 6334 4 0 0 chrUextra 15841242 15841952 -13162704 + Copia2_I LTR Copia 116 825 -3337 9 705 28 48 0 0 chrUextra 15842139 15842181 -13162475 + AT_rich Low_complexity Low_complexity 1 42 0 9 705 37 39 0 0 chrUextra 15842536 15842587 -13162069 + AT_rich Low_complexity Low_complexity 1 51 0 9 705 22 35 0 0 chrUextra 15842688 15842717 -13161939 + AT_rich Low_complexity Low_complexity 1 29 0 9 705 6171 16 1 0 chrUextra 15842862 15843572 -13161084 + DMRT1B LINE R1 3744 4454 -729 9 705 1137 8 0 0 chrUextra 15843672 15843803 -13160853 - FW_DM LINE Jockey -3705 987 857 9 705 4636 0 0 0 chrUextra 15843803 15844309 -13160347 + TABOR_LTR LTR Gypsy 1 506 0 9 705 622 0 0 0 chrUextra 15844309 15844382 -13160274 + TABOR_I LTR Gypsy 1 73 -6263 9 705 4009 10 1 9 chrUextra 15844484 15845192 -13159464 - DOC LINE Jockey -1711 3014 2233 9 705 5838 10 16 4 chrUextra 15845292 15846002 -13158654 + MDG1_I LTR Gypsy 888 1605 -4991 9 705 3181 188 10 8 chrUextra 15846102 15846812 -13157844 + SAR_DM Satellite Satellite 296 1006 -466 9 705 3614 164 1 21 chrUextra 15846954 15847621 -13157035 - ROVER-I_DM LTR Gypsy -1276 5308 4655 9 705 5322 59 17 1 chrUextra 15847722 15848432 -13156224 - IDEFIX_I LTR Gypsy -4864 764 44 9 705 6351 0 0 1 chrUextra 15848532 15849242 -13155414 + LSU-rRNA_Dme rRNA rRNA 566 1274 -2626 9 705 851 0 0 0 chrUextra 15849354 15849450 -13155206 + NTS_DM Other Other 38 133 -107 9 705 1442 20 20 25 chrUextra 15849450 15849654 -13155002 + NTS_DM Other Other 38 240 0 9 705 1813 21 17 17 chrUextra 15849654 15849894 -13154762 + NTS_DM Other Other 1 240 0 9 705 1296 19 0 0 chrUextra 15849894 15850048 -13154608 + NTS_DM Other Other 1 154 -86 9 705 3327 54 98 78 chrUextra 15850152 15850754 -13153902 + ROO_I LTR Pao 281 894 -7362 9 705 953 34 0 0 chrUextra 15850743 15850862 -13153794 + ROO_I LTR Pao 1303 1421 -6835 9 705 4500 32 0 5 chrUextra 15851110 15851672 -13152984 - CIRCE LINE Composite -1376 4980 4422 9 705 3328 176 7 16 chrUextra 15851772 15852482 -13152174 - SAR_DM Satellite Satellite -464 1008 305 9 705 5757 37 7 4 chrUextra 15852582 15853292 -13151364 + MDG1_I LTR Gypsy 1551 2262 -4334 9 705 703 114 0 9 chrUextra 15853392 15853507 -13151149 - ARS406_DM Unknown Unknown -239 114 1 9 705 3276 176 6 7 chrUextra 15853413 15854099 -13150557 + SAR_DM Satellite Satellite 195 879 -593 9 705 3126 196 7 8 chrUextra 15854202 15854912 -13149744 - SAR_DM Satellite Satellite -515 957 249 9 705 6022 11 23 0 chrUextra 15855012 15855720 -13148936 - QUASIMODO_I LTR Gypsy -3706 2354 1631 9 705 6257 16 1 0 chrUextra 15855822 15856532 -13148124 - MDG3_I LTR Gypsy -3393 1593 883 9 705 5258 2 0 3 chrUextra 15856632 15857213 -13147443 - SSU-rRNA_Dme rRNA rRNA -1416 579 1 9 705 3118 0 0 0 chrUextra 15857442 15857783 -13146873 + LSU-rRNA_Dme rRNA rRNA 3560 3900 0 9 705 29 28 0 0 chrUextra 15857855 15857891 -13146765 + AT_rich Low_complexity Low_complexity 1 36 0 9 705 262 150 0 0 chrUextra 15857896 15857936 -13146720 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 705 262 150 0 0 chrUextra 15857988 15858028 -13146628 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 705 262 150 0 0 chrUextra 15858080 15858120 -13146536 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 705 6269 11 0 0 chrUextra 15858252 15858962 -13145694 + Invader6_I LTR Gypsy 3203 3912 -187 9 88 6515 0 0 0 chrUextra 15859064 15859772 -13144884 + MAX_I LTR Pao 6035 6742 -1172 9 706 1868 170 41 14 chrUextra 15859872 15859899 -13144757 + SAR_DM Satellite Satellite 1 37 -1106 9 706 1391 65 0 0 chrUextra 15859899 15860085 -13144571 - ARS406_DM Unknown Unknown -167 186 1 9 706 1868 170 41 14 chrUextra 15860085 15860580 -13144076 + SAR_DM Satellite Satellite 38 727 -416 9 706 1121 7 0 0 chrUextra 15860682 15860822 -13143834 + DOC2_DM LINE Jockey 4654 4793 0 9 706 1939 86 32 17 chrUextra 15860934 15861392 -13143264 + DOC2_DM LINE Jockey 6 565 -4228 9 706 4525 0 0 0 chrUextra 15861492 15861994 -13142662 + Copia_I LTR Copia 4092 4593 0 9 706 1769 0 39 0 chrUextra 15861994 15862201 -13142455 + Copia_LTR LTR Copia 1 215 -61 9 706 5003 44 68 13 chrUextra 15862302 15863012 -13141644 - QUASIMODO_I LTR Gypsy -961 5099 4351 9 706 4869 105 28 1 chrUextra 15863112 15863819 -13140837 + Gypsy12_I LTR Gypsy 3331 4056 -1490 9 706 23 0 0 0 chrUextra 15864350 15864373 -13140283 + AT_rich Low_complexity Low_complexity 1 23 0 9 706 996 26 0 0 chrUextra 15864517 15864632 -13140024 + DIVER2_I LTR Pao 1366 1480 -2667 9 706 764 102 0 0 chrUextra 15864732 15864850 -13139806 - ARS406_DM Unknown Unknown -235 118 1 9 706 3113 183 7 9 chrUextra 15864754 15865442 -13139214 + SAR_DM Satellite Satellite 192 878 -594 9 706 1621 11 0 0 chrUextra 15865542 15865731 -13138925 + DM176_LTR LTR Gypsy 319 507 0 9 706 4222 6 0 4 chrUextra 15865731 15866250 -13138406 + DM176_I LTR Gypsy 1 517 -5903 9 706 6285 4 8 0 chrUextra 15866352 15867062 -13137594 - DMRT1B LINE R1 -4324 859 144 9 706 5967 25 17 1 chrUextra 15867162 15867872 -13136784 + R1_DM LINE R1 4187 4907 -449 9 706 364 159 0 80 chrUextra 15868782 15868857 -13135799 - HETRP_DM Satellite Satellite -286 1586 1518 9 706 688 193 14 14 chrUextra 15868970 15869117 -13135539 - HETRP_DM Satellite Satellite -197 1675 1529 9 706 659 199 12 49 chrUextra 15869245 15869409 -13135247 - HETRP_DM Satellite Satellite -197 1675 1518 9 706 2358 199 68 31 chrUextra 15869592 15870297 -13134359 + SAR_DM Satellite Satellite 516 1246 -226 9 706 3860 26 117 7 chrUextra 15870420 15871112 -13133544 + PROTOP DNA P 1 797 -308 9 706 6329 4 18 0 chrUextra 15871212 15871922 -13132734 - Gypsy4_I LTR Gypsy -3605 2683 1961 9 706 6377 0 1 3 chrUextra 15872024 15872732 -13131924 + SSU-rRNA_Dme rRNA rRNA 810 1516 -479 9 706 546 244 23 35 chrUextra 15872840 15873014 -13131642 - Gypsy_LTR LTR Gypsy -278 204 33 9 706 590 230 0 0 chrUextra 15873016 15873142 -13131514 - Gypsy_I LTR Gypsy -288 6219 6094 9 706 278 211 40 50 chrUextra 15873158 15873258 -13131398 - TIRANT_LTR LTR Gypsy -94 323 225 9 706 2025 54 4 40 chrUextra 15873270 15873542 -13131114 - Gypsy4_LTR LTR Gypsy 0 287 26 9 706 6061 27 0 0 chrUextra 15873642 15874351 -13130305 + STALKER4_I LTR Gypsy 3454 4162 -2368 9 706 792 37 0 115 chrUextra 15874845 15874967 -13129689 - Baggins1 LINE LOA 0 5453 5346 9 706 6206 11 0 0 chrUextra 15875264 15875972 -13128684 + FW_DM LINE Jockey 2287 2994 -1698 9 706 6251 14 1 0 chrUextra 15876072 15876782 -13127874 + Gypsy4_I LTR Gypsy 2550 3260 -3028 9 706 3159 172 22 11 chrUextra 15876888 15877592 -13127064 - SAR_DM Satellite Satellite -693 711 1 9 706 3015 23 0 0 chrUextra 15877692 15878034 -13126622 + R1_DM LINE R1 5015 5356 0 9 706 2535 63 6 6 chrUextra 15878067 15878402 -13126254 + R1_DM LINE R1 1 335 -5021 9 706 4567 63 68 41 chrUextra 15878502 15879163 -13125493 + CIRCE LINE Composite 292 970 -5386 9 706 291 125 21 0 chrUextra 15879323 15879371 -13125285 + NTS_DM Other Other 1 49 -191 9 706 1062 150 30 17 chrUextra 15879469 15879699 -13124957 + NTS_DM Other Other 8 240 0 9 706 225 183 45 68 chrUextra 15879750 15879838 -13124818 + NTS_DM Other Other 155 240 0 9 706 1034 131 5 5 chrUextra 15879838 15880022 -13124634 + NTS_DM Other Other 1 184 -56 9 706 6512 1 0 0 chrUextra 15880932 15881642 -13123014 + SSU-rRNA_Dme rRNA rRNA 268 977 -1018 9 706 3045 6 0 0 chrUextra 15881742 15882077 -13122579 - LSU-rRNA_Dme rRNA rRNA -988 2912 2578 9 706 3429 0 0 3 chrUextra 15882073 15882452 -13122204 - R2_DM LINE R2 -9 3598 3221 9 706 6073 24 0 1 chrUextra 15882552 15883261 -13121395 - FW_DM LINE Jockey -227 4465 3758 9 706 6178 8 0 1 chrUextra 15883362 15884072 -13120584 + QUASIMODO_I LTR Gypsy 2407 3115 -2945 9 706 3170 170 23 21 chrUextra 15884177 15884882 -13119774 - SAR_DM Satellite Satellite -382 1090 385 9 706 6493 1 0 0 chrUextra 15884982 15885692 -13118964 - SSU-rRNA_Dme rRNA rRNA -966 1029 320 9 706 5694 2 0 0 chrUextra 15885792 15886417 -13118239 + LSU-rRNA_Dme rRNA rRNA 1957 2581 -1319 9 706 682 0 24 0 chrUextra 15886415 15886499 -13118157 + R2_DM LINE R2 3 88 -3519 9 706 5873 40 1 1 chrUextra 15887412 15888122 -13116534 - R1_DM LINE R1 -3667 1689 980 9 706 2264 0 0 0 chrUextra 15888222 15888473 -13116183 + R2_DM LINE R2 3357 3607 0 9 706 455 36 0 0 chrUextra 15888469 15888524 -13116132 + LSU-rRNA_Dme rRNA rRNA 2578 2632 -1268 9 706 3519 0 5 0 chrUextra 15888524 15888932 -13115724 + R1_DM LINE R1 1 410 -4946 9 706 369 21 0 0 chrUextra 15889032 15889080 -13115576 + ARS406_DM Unknown Unknown 111 158 -195 9 706 1874 174 2 7 chrUextra 15889087 15889497 -13115159 - SAR_DM Satellite Satellite -569 903 496 9 706 1102 152 4 9 chrUextra 15889512 15889737 -13114919 - SAR_DM Satellite Satellite -569 903 680 9 706 5958 1 1 0 chrUextra 15889842 15890552 -13114104 + ROO_I LTR Pao 3099 3809 -4447 9 706 6026 10 3 1 chrUextra 15892272 15892982 -13111674 + Copia2_I LTR Copia 1715 2425 -1737 9 706 5889 17 16 0 chrUextra 15893082 15893792 -13110864 - R1_DM LINE R1 -3037 2319 1599 9 706 26 30 0 0 chrUextra 15893987 15894020 -13110636 + AT_rich Low_complexity Low_complexity 1 33 0 9 706 1836 39 4 0 chrUextra 15894370 15894602 -13110054 - PROTOP DNA P 0 4480 4248 9 706 2415 4 0 0 chrUextra 15895512 15895790 -13108866 - DM176_I LTR Gypsy -6142 278 1 9 706 3619 7 0 2 chrUextra 15895790 15896222 -13108434 - DM176_LTR LTR Gypsy 0 507 77 9 706 2692 62 5 19 chrUextra 15896653 15897032 -13107624 - Baggins1 LINE LOA -262 5191 4818 9 706 3710 63 42 23 chrUextra 15897132 15897793 -13106863 + PROTOP_A DNA P 534 1153 0 9 706 2463 106 10 16 chrUextra 15897942 15898652 -13106004 - DMSAT6 Satellite Satellite -102 705 1 9 706 3459 17 0 0 chrUextra 15898752 15899168 -13105488 + G2_DM LINE Jockey 578 993 -2109 9 706 2460 20 0 0 chrUextra 15899168 15899462 -13105194 + PROTOP_A DNA P 1 294 -811 9 706 795 84 0 0 chrUextra 15899562 15899681 -13104975 - ARS406_DM Unknown Unknown -233 120 2 9 706 2922 177 9 10 chrUextra 15899586 15900272 -13104384 + SAR_DM Satellite Satellite 192 876 -596 9 706 335 96 356 0 chrUextra 15900372 15900445 -13104211 - Gypsy12_I LTR Gypsy -983 4563 4465 9 706 3435 104 34 97 chrUextra 15900442 15901082 -13103574 - Gypsy12_I LTR Gypsy -3725 1821 1222 9 706 2712 179 20 24 chrUextra 15901187 15901892 -13102764 - SAR_DM Satellite Satellite -313 1159 458 9 706 597 332 10 9 chrUextra 15902314 15902679 -13101977 - GTWIN_I LTR Gypsy -2883 3538 3117 9 706 4392 15 0 0 chrUextra 15902802 15903322 -13101334 + R1_DM LINE R1 4837 5356 0 9 706 1241 20 0 0 chrUextra 15903320 15903468 -13101188 + LSU-rRNA_Dme rRNA rRNA 2640 2787 -1113 9 706 307 0 0 0 chrUextra 15903477 15903512 -13101144 + R2_DM LINE R2 374 408 -3199 9 706 5950 3 3 0 chrUextra 15903612 15904322 -13100334 - ROO_I LTR Pao -4005 4251 3540 9 706 1146 15 0 0 chrUextra 15904611 15904746 -13099910 - 5S_DM RNA RNA 0 135 1 9 706 1167 7 0 0 chrUextra 15904994 15905129 -13099527 - 5S_DM RNA RNA 0 135 1 9 706 28 48 0 0 chrUextra 15905340 15905382 -13099274 + AT_rich Low_complexity Low_complexity 1 42 0 9 706 32 0 0 0 chrUextra 15905710 15905742 -13098914 + AT_rich Low_complexity Low_complexity 1 32 0 9 706 596 0 0 0 chrUextra 15905874 15905942 -13098714 + SSU-rRNA_Dme rRNA rRNA 1 68 -1927 9 706 5760 11 0 0 chrUextra 15906042 15906752 -13097904 + Invader2_I LTR Gypsy 1619 2328 -2264 9 706 2795 167 47 19 chrUextra 15906852 15907555 -13097101 - SAR_DM Satellite Satellite -504 968 246 9 706 256 128 0 0 chrUextra 15907515 15907562 -13097094 + ARS406_DM Unknown Unknown 1 47 -306 9 706 1326 13 0 0 chrUextra 15907662 15907814 -13096842 + (GAGAA)n Simple_repeat Simple_repeat 4 155 0 9 706 735 0 0 0 chrUextra 15908471 15908557 -13096099 - NTS_DM Other Other -117 123 38 9 706 870 9 0 27 chrUextra 15908557 15908669 -13095987 - NTS_DM Other Other -107 133 25 9 706 1252 18 0 6 chrUextra 15908721 15908886 -13095770 - NTS_DM Other Other -39 201 38 9 706 843 18 0 27 chrUextra 15908886 15908998 -13095658 - NTS_DM Other Other -107 133 25 9 706 877 23 8 8 chrUextra 15909050 15909180 -13095476 - NTS_DM Other Other -39 201 72 9 706 219 114 0 0 chrUextra 15909753 15909788 -13094868 + (TC)n Simple_repeat Simple_repeat 1 35 0 9 706 6040 8 1 0 chrUextra 15910089 15910798 -13093858 + DMRT1B LINE R1 1464 2173 -3010 9 706 1804 76 4 0 chrUextra 15910898 15911161 -13093495 + HETA LINE telomeric 5818 6081 0 9 706 2536 71 8 19 chrUextra 15911154 15911607 -13093049 + HETA LINE telomeric 1 631 -5450 9 706 3078 65 30 2 chrUextra 15911707 15912139 -13092517 - R1_DM LINE R1 -3978 1378 935 9 706 2193 61 0 0 chrUextra 15912121 15912416 -13092240 - R1_DM LINE R1 -4740 616 322 9 706 2671 187 16 27 chrUextra 15913325 15914034 -13090622 + SAR_DM Satellite Satellite 457 1157 -315 9 706 262 106 0 21 chrUextra 15914213 15914261 -13090395 - HMSBEAGLE_I LTR Gypsy -6308 221 175 9 706 351 49 65 16 chrUextra 15914283 15914345 -13090311 - HMSBEAGLE_I LTR Gypsy -6464 65 1 9 706 874 178 102 15 chrUextra 15914344 15914549 -13090107 - DMLTR5 LTR Gypsy 0 266 44 9 706 1757 0 14 5 chrUextra 15914943 15915163 -13089493 + LSU-rRNA_Dme rRNA rRNA 1567 1788 -2112 9 706 3887 2 0 0 chrUextra 15915207 15915652 -13089004 + LSU-rRNA_Dme rRNA rRNA 1788 2232 -1668 9 706 3410 18 7 41 chrUextra 15915776 15916239 -13088417 - CIRCE LINE Composite -929 5427 4981 9 706 2389 204 37 13 chrUextra 15916561 15917264 -13087392 - SAR_DM Satellite Satellite -1033 719 1 9 706 5918 3 0 0 chrUextra 15917370 15918079 -13086577 - STALKER4_I LTR Gypsy -2921 3609 2901 9 706 268 152 0 0 chrUextra 15918179 15918225 -13086431 - ARS406_DM Unknown Unknown -185 168 123 9 706 2726 175 30 14 chrUextra 15918221 15918888 -13085768 + SAR_DM Satellite Satellite 201 878 -594 9 706 970 16 0 23 chrUextra 15918988 15919119 -13085537 - BLASTOPIA_LTR LTR Gypsy -147 128 1 9 706 4958 2 2 3 chrUextra 15919119 15919697 -13084959 + LSU-rRNA_Dme rRNA rRNA 911 1487 -2413 9 706 5825 21 3 0 chrUextra 15919798 15920506 -13084150 + R1_DM LINE R1 2799 3508 -1848 9 706 2578 34 6 0 chrUextra 15920606 15920934 -13083722 - DM1731_LTR LTR Copia -6 330 1 9 706 1587 5 0 0 chrUextra 15920947 15921163 -13083493 + (TATAA)n Simple_repeat Simple_repeat 1 216 0 9 706 1150 53 0 0 chrUextra 15921163 15921315 -13083341 - DM1731_LTR LTR Copia -1 335 184 9 706 1059 61 40 0 chrUextra 15921416 15921563 -13083093 + DMCR1A LINE CR1 3458 3610 -860 9 706 4358 36 0 2 chrUextra 15921563 15922124 -13082532 - PROTOP_A DNA P 0 1105 546 9 706 5992 1 1 1 chrUextra 15923033 15923742 -13080914 + MDG3_I LTR Gypsy 3608 4316 -670 9 706 6035 1 1 0 chrUextra 15923842 15924548 -13080108 + R1_DM LINE R1 2897 3603 -1753 9 706 3060 182 4 6 chrUextra 15924661 15925342 -13079314 - SAR_DM Satellite Satellite -569 903 224 9 706 406 162 0 0 chrUextra 15925280 15925360 -13079296 + ARS406_DM Unknown Unknown 1 80 -273 9 706 3046 172 10 16 chrUextra 15925460 15926169 -13078487 + SAR_DM Satellite Satellite 267 971 -501 9 706 5845 7 0 0 chrUextra 15926269 15926978 -13077678 + STALKER4_I LTR Gypsy 2781 3489 -3041 9 706 3173 170 10 7 chrUextra 15927897 15928596 -13076060 - SAR_DM Satellite Satellite -396 1076 376 9 706 4216 0 0 0 chrUextra 15928696 15929223 -13075433 + Invader2_I LTR Gypsy 4063 4589 -3 9 706 1576 0 0 0 chrUextra 15929226 15929405 -13075251 + Invader2_LTR LTR Gypsy 1 179 -87 9 706 5469 47 1 1 chrUextra 15929505 15930214 -13074442 - R1_DM LINE R1 -3887 1469 761 9 706 3403 26 3 4 chrUextra 15930349 15931023 -13073633 - PROTOP_A DNA P 0 1105 385 9 706 607 30 38 38 chrUextra 15931125 15931230 -13073426 + NTS_DM Other Other 136 240 0 9 706 1756 17 17 17 chrUextra 15931230 15931470 -13073186 + NTS_DM Other Other 1 240 0 9 706 1734 21 17 17 chrUextra 15931470 15931710 -13072946 + NTS_DM Other Other 1 240 0 9 706 1009 8 8 0 chrUextra 15931710 15931832 -13072824 + NTS_DM Other Other 1 123 -117 9 706 6160 1 0 1 chrUextra 15931932 15932641 -13072015 + LSU-rRNA_Dme rRNA rRNA 2388 3095 -805 9 706 675 134 20 34 chrUextra 15932741 15932888 -13071768 + HETA LINE telomeric 3043 3187 -2894 9 706 2235 87 17 12 chrUextra 15933081 15933450 -13071206 + HETA LINE telomeric 5079 5430 -651 9 706 1152 21 0 0 chrUextra 15933550 15933693 -13070963 + QUASIMODO_LTR LTR Gypsy 516 658 0 9 706 4681 9 0 16 chrUextra 15933693 15934259 -13070397 + QUASIMODO_I LTR Gypsy 1 557 -5503 9 706 6205 1 1 0 chrUextra 15934359 15935068 -13069588 + LSU-rRNA_Dme rRNA rRNA 3132 3841 -59 9 706 954 33 0 0 chrUextra 15935978 15936098 -13068558 - Copia2_LTR_DM LTR Copia -38 160 41 9 706 3611 87 55 5 chrUextra 15936106 15936686 -13067970 + IDEFIX_I LTR Gypsy 3820 4428 -1200 9 706 6033 8 0 0 chrUextra 15937597 15938304 -13066352 - R1_DM LINE R1 -239 5117 4411 9 706 21 89 0 0 chrUextra 15938965 15939021 -13065635 + AT_rich Low_complexity Low_complexity 1 56 0 9 706 23 68 0 0 chrUextra 15939059 15939103 -13065553 + AT_rich Low_complexity Low_complexity 1 44 0 9 706 5757 30 3 0 chrUextra 15939213 15939922 -13064734 + R1_DM LINE R1 1455 2165 -3191 9 706 4827 26 0 0 chrUextra 15940022 15940604 -13064052 - CIRCE LINE Composite -347 6009 5428 9 706 6104 4 0 0 chrUextra 15940831 15941540 -13063116 - R1_DM LINE R1 -2879 2477 1769 9 706 6018 0 1 0 chrUextra 15941640 15942346 -13062310 + DMRT1B LINE R1 2348 3054 -2129 9 706 5906 0 1 0 chrUextra 15942449 15943158 -13061498 + ROO_I LTR Pao 698 1407 -6849 9 706 2360 98 25 31 chrUextra 15943258 15943940 -13060716 + DMSAT6 Satellite Satellite 1 678 -245 9 706 2908 179 8 21 chrUextra 15944067 15944776 -13059880 + SAR_DM Satellite Satellite 414 1113 -359 9 706 6131 3 0 3 chrUextra 15944876 15945585 -13059071 + SSU-rRNA_Dme rRNA rRNA 141 847 -1148 9 706 6040 0 0 0 chrUextra 15945685 15946394 -13058262 - ROO_I LTR Pao -1121 7135 6427 9 706 985 33 0 0 chrUextra 15947303 15947423 -13057233 + R1_DM LINE R1 5237 5356 0 9 706 4095 65 23 3 chrUextra 15947444 15948012 -13056644 + R1_DM LINE R1 23 601 -4755 9 706 5302 43 15 0 chrUextra 15948142 15948821 -13055835 + DOC3_DM LINE Jockey 1647 2335 -2405 9 706 943 0 0 0 chrUextra 15948921 15949028 -13055628 + LSU-rRNA_Dme rRNA rRNA 3794 3900 0 9 706 29 28 0 0 chrUextra 15949100 15949136 -13055520 + AT_rich Low_complexity Low_complexity 1 36 0 9 706 246 150 0 0 chrUextra 15949141 15949181 -13055475 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 706 246 150 0 0 chrUextra 15949233 15949273 -13055383 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 706 246 150 0 0 chrUextra 15949325 15949365 -13055291 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 706 255 125 0 0 chrUextra 15949408 15949448 -13055208 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 706 22 56 0 0 chrUextra 15949461 15949497 -13055159 + AT_rich Low_complexity Low_complexity 1 36 0 9 706 809 19 0 28 chrUextra 15949523 15949630 -13055026 + NTS_DM Other Other 25 128 -112 9 706 5704 8 0 0 chrUextra 15949730 15950439 -13054217 + QUASIMODO_I LTR Gypsy 3369 4077 -1983 9 706 283 0 0 0 chrUextra 15950539 15950573 -13054083 + TAHRE LINE telomeric 10419 10452 -11 9 706 825 119 55 97 chrUextra 15950572 15950861 -13053795 + HETA LINE telomeric 190 466 -5615 9 706 2001 139 19 8 chrUextra 15950852 15951248 -13053408 + HETA LINE telomeric 349 1025 -5056 9 706 2261 110 7 74 chrUextra 15951348 15952042 -13052614 + DMSAT6 Satellite Satellite 1 647 -82 9 706 1590 14 18 18 chrUextra 15952157 15952378 -13052278 + NTS_DM Other Other 20 240 0 9 706 1731 21 17 17 chrUextra 15952378 15952618 -13052038 + NTS_DM Other Other 1 240 0 9 706 1756 17 17 17 chrUextra 15952618 15952858 -13051798 + NTS_DM Other Other 1 240 0 9 706 3178 171 9 9 chrUextra 15956202 15956900 -13047756 + SAR_DM Satellite Satellite 379 1076 -396 9 706 5945 10 8 0 chrUextra 15957011 15957720 -13046936 - Copia2_I LTR Copia -2709 1453 739 9 706 511 0 51 39 chrUextra 15957820 15957898 -13046758 + NTS_DM Other Other 162 240 0 9 706 1850 4 17 13 chrUextra 15957898 15958137 -13046519 + NTS_DM Other Other 1 240 0 9 706 1847 4 17 13 chrUextra 15958137 15958376 -13046280 + NTS_DM Other Other 1 240 0 9 706 1243 7 7 0 chrUextra 15958376 15958529 -13046127 + NTS_DM Other Other 1 154 -86 9 706 2954 181 13 7 chrUextra 15958631 15959327 -13045329 - SAR_DM Satellite Satellite -549 923 224 9 706 426 113 0 0 chrUextra 15959265 15959336 -13045320 + ARS406_DM Unknown Unknown 1 71 -282 9 706 6074 6 0 0 chrUextra 15959438 15960147 -13044509 - R1_DM LINE R1 -2640 2716 2008 9 706 587 234 38 30 chrUextra 15960248 15960513 -13044143 + XDMR_DM Unknown Unknown 84 350 -10 9 706 928 277 37 33 chrUextra 15960376 15960947 -13043709 - SAR_DM Satellite Satellite -640 832 260 9 706 5837 28 0 0 chrUextra 15961865 15962574 -13042082 + R1_DM LINE R1 1276 1984 -3372 9 706 495 285 31 31 chrUextra 15962972 15963262 -13041394 + DM176_I LTR Gypsy 1839 2128 -4292 9 706 1196 14 7 7 chrUextra 15963234 15963383 -13041273 - TLD3 Unknown Unknown -3 169 21 9 706 2577 165 24 78 chrUextra 15963483 15964192 -13040464 + SAR_DM Satellite Satellite 334 1004 -468 9 706 6043 1 1 4 chrUextra 15964292 15965001 -13039655 - LSU-rRNA_Dme rRNA rRNA -2462 1438 732 9 706 4644 47 2 3 chrUextra 15965101 15965810 -13038846 - ROVER-I_DM LTR Gypsy -1211 5373 4461 9 706 702 108 8 0 chrUextra 15965910 15966030 -13038626 - ARS406_DM Unknown Unknown -231 122 2 9 706 2902 180 9 10 chrUextra 15965935 15966619 -13038037 + SAR_DM Satellite Satellite 192 874 -598 9 706 1543 0 0 0 chrUextra 15966960 15967144 -13037512 - NTS_DM Other Other -56 184 1 9 706 1861 0 17 13 chrUextra 15967144 15967383 -13037273 - NTS_DM Other Other 0 240 1 9 706 228 0 89 67 chrUextra 15967383 15967428 -13037228 - NTS_DM Other Other 0 240 195 9 706 1521 11 0 0 chrUextra 15967528 15967707 -13036949 + CIRCE LINE Composite 792 970 -5386 9 706 2276 59 0 75 chrUextra 15967849 15968195 -13036461 + CIRCE LINE Composite 973 1292 -5064 9 706 247 222 0 0 chrUextra 15968170 15968224 -13036432 + DM176_I LTR Gypsy 2641 2694 -3726 9 706 246 150 0 0 chrUextra 15968397 15968437 -13036219 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 706 22 56 0 0 chrUextra 15968442 15968478 -13036178 + AT_rich Low_complexity Low_complexity 1 36 0 9 706 4339 0 2 0 chrUextra 15968550 15969046 -13035610 - LSU-rRNA_Dme rRNA rRNA 0 3900 3404 9 706 2934 190 17 8 chrUextra 15969146 15969853 -13034803 - SAR_DM Satellite Satellite -488 984 272 9 706 1939 188 37 8 chrUextra 15969956 15970440 -13034216 - SAR_DM Satellite Satellite -718 754 257 9 706 6135 0 1 3 chrUextra 15970764 15971473 -13033183 + SSU-rRNA_Dme rRNA rRNA 1256 1963 -32 9 706 1305 59 0 0 chrUextra 15971573 15971862 -13032794 + (CTTAT)n Simple_repeat Simple_repeat 1 289 0 9 706 2295 4 0 0 chrUextra 15971863 15972130 -13032526 - MDG3_LTR LTR Gypsy 0 267 1 9 706 1255 7 0 0 chrUextra 15972130 15972282 -13032374 - MDG3_I LTR Gypsy 0 4986 4835 9 706 2289 176 10 6 chrUextra 15972386 15973091 -13031565 + SAR_DM Satellite Satellite 1 707 -677 9 706 708 12 0 0 chrUextra 15973191 15973275 -13031381 + DMRT1B LINE R1 5100 5183 0 9 706 505 30 105 0 chrUextra 15973293 15973426 -13031230 + (CAGAC)n Simple_repeat Simple_repeat 1 147 0 9 706 3140 49 28 0 chrUextra 15973438 15973900 -13030756 + DMRT1A LINE R1 1 620 -4563 9 706 2910 194 15 18 chrUextra 15974000 15974709 -13029947 + SAR_DM Satellite Satellite 1 707 -208 9 706 3126 158 23 10 chrUextra 15976438 15977135 -13027521 - SAR_DM Satellite Satellite -396 1076 371 9 706 5590 0 1 37 chrUextra 15977236 15977945 -13026711 + LSU-rRNA_Dme rRNA rRNA 14 697 -3203 9 706 3338 158 10 9 chrUextra 15978057 15978754 -13025902 + SAR_DM Satellite Satellite 332 1029 -443 9 706 2069 43 0 0 chrUextra 15979663 15979920 -13024736 + PROTOP DNA P 4224 4480 0 9 706 27 81 0 0 chrUextra 15980268 15980330 -13024326 + AT_rich Low_complexity Low_complexity 1 62 0 9 706 6222 0 1 0 chrUextra 15980472 15981181 -13023475 + R2_DM LINE R2 1847 2556 -1051 9 706 2384 94 13 31 chrUextra 15981287 15981990 -13022666 + DMSAT6 Satellite Satellite 1 689 -48 9 706 5687 20 0 0 chrUextra 15982090 15982799 -13021857 + QUASIMODO_I LTR Gypsy 957 1665 -4395 9 706 2740 0 6 0 chrUextra 15982899 15983218 -13021438 - R1_DM LINE R1 -5035 321 1 9 706 3017 3 0 0 chrUextra 15983262 15983608 -13021048 - R1_DM LINE R1 0 5356 5011 9 706 2585 192 12 11 chrUextra 15983710 15984353 -13020303 + SAR_DM Satellite Satellite 267 910 -562 9 706 772 204 175 10 chrUextra 15984125 15984417 -13020239 - XDMR_DM Unknown Unknown 0 360 21 9 706 6078 0 3 4 chrUextra 15984517 15985226 -13019430 - SSU-rRNA_Dme rRNA rRNA -149 1846 1139 9 706 2594 129 41 102 chrUextra 15985326 15986035 -13018621 - PROTOP_B DNA P -171 982 317 9 706 5852 11 7 0 chrUextra 15986135 15986844 -13017812 - DMRT1B LINE R1 -3693 1490 777 9 706 781 31 0 0 chrUextra 15986944 15987040 -13017616 - DM176_I LTR Gypsy -1333 5087 4992 9 706 4362 14 0 71 chrUextra 15987033 15987653 -13017003 - DM176_I LTR Gypsy -5455 965 390 9 706 742 90 16 0 chrUextra 15987753 15987875 -13016781 - ARS406_DM Unknown Unknown -229 124 1 9 706 2991 178 9 7 chrUextra 15987782 15988462 -13016194 + SAR_DM Satellite Satellite 195 875 -597 9 706 1094 81 139 0 chrUextra 15988563 15988736 -13015920 - DMCR1A LINE CR1 -687 3783 3587 9 706 609 46 52 37 chrUextra 15988733 15988868 -13015788 - DMCR1A LINE CR1 -1255 3215 3037 9 706 3336 20 0 0 chrUextra 15988874 15989271 -13015385 - DMCR1A LINE CR1 -1555 2915 2519 9 706 6139 1 1 0 chrUextra 15989374 15990080 -13014576 - LSU-rRNA_Dme rRNA rRNA -1107 2793 2087 9 706 2807 79 10 5 chrUextra 15990180 15990587 -13014069 - R1_DM LINE R1 -4947 409 1 9 88 2155 34 0 7 chrUextra 15990620 15990889 -13013767 - R1_DM LINE R1 0 5356 5090 9 707 6179 3 0 0 chrUextra 15990989 15991698 -13012958 - LSU-rRNA_Dme rRNA rRNA -1382 2518 1810 9 707 28 48 0 0 chrUextra 15992039 15992081 -13012575 + AT_rich Low_complexity Low_complexity 1 42 0 9 707 488 119 36 0 chrUextra 15992354 15992438 -13012218 - NTS_DM Other Other -150 90 4 9 707 24 0 0 0 chrUextra 15992624 15992648 -13012008 + AT_rich Low_complexity Low_complexity 1 24 0 9 707 1780 290 0 0 chrUextra 15992650 15993225 -13011431 + ROVER-I_DM LTR Gypsy 913 1487 -5097 9 707 545 295 38 38 chrUextra 15993771 15994124 -13010532 + Copia2_I LTR Copia 1392 1836 -2326 9 707 6035 6 3 0 chrUextra 15994225 15994934 -13009722 + DOC2_DM LINE Jockey 2260 2970 -1823 9 707 725 11 0 42 chrUextra 15995034 15995130 -13009526 + R1_DM LINE R1 4505 4596 -760 9 707 5333 3 0 0 chrUextra 15995129 15995743 -13008913 - DMRT1B LINE R1 0 5183 4570 9 707 1216 6 23 17 chrUextra 15996652 15996825 -13007831 + NTS_DM Other Other 67 240 0 9 707 1847 4 17 13 chrUextra 15996825 15997064 -13007592 + NTS_DM Other Other 1 240 0 9 707 1301 6 0 18 chrUextra 15997064 15997229 -13007427 + NTS_DM Other Other 1 162 -78 9 707 1449 93 14 0 chrUextra 15997461 15997675 -13006981 - MDG1_LTR LTR Gypsy -103 339 123 9 707 383 68 17 0 chrUextra 15997687 15997746 -13006910 + (TTA)n Simple_repeat Simple_repeat 3 62 0 9 707 1512 40 447 64 chrUextra 15997765 15998170 -13006486 - MDG1_I LTR Gypsy 0 6596 6037 9 707 34 24 0 0 chrUextra 15998374 15998415 -13006241 + AT_rich Low_complexity Low_complexity 1 41 0 9 707 21 95 0 0 chrUextra 15998628 15998691 -13005965 + AT_rich Low_complexity Low_complexity 1 63 0 9 707 2003 0 0 91 chrUextra 15998703 15998979 -13005677 + LSU-rRNA_Dme rRNA rRNA 1 251 -3649 9 707 5246 2 0 38 chrUextra 15999079 15999740 -13004916 - LSU-rRNA_Dme rRNA rRNA -3264 636 1 9 707 968 9 0 0 chrUextra 15999888 16000000 -13004656 - R1_DM LINE R1 -143 5213 5102 9 707 5373 3 0 0 chrUextra 16000000 16000597 -13004059 - R1_DM LINE R1 -255 5101 4505 9 707 3034 192 18 23 chrUextra 16000697 16001405 -13003251 + SAR_DM Satellite Satellite 1 704 -203 9 707 732 10 0 29 chrUextra 16001506 16001609 -13003047 + NTS_DM Other Other 63 162 -78 9 707 502 131 36 0 chrUextra 16001719 16001803 -13002853 + NTS_DM Other Other 4 90 -150 9 707 28 48 0 0 chrUextra 16002076 16002118 -13002538 + AT_rich Low_complexity Low_complexity 1 42 0 9 707 2655 183 22 33 chrUextra 16002315 16003024 -13001632 + SAR_DM Satellite Satellite 1 701 -300 9 707 969 65 7 0 chrUextra 16003124 16003262 -13001394 + ARS406_DM Unknown Unknown 51 189 -164 9 707 3258 182 7 6 chrUextra 16003140 16003831 -13000825 - SAR_DM Satellite Satellite -535 937 246 9 707 3386 170 10 9 chrUextra 16003933 16004632 -13000024 + SAR_DM Satellite Satellite 355 1054 -418 9 707 22 35 0 0 chrUextra 16005573 16005602 -12999054 + AT_rich Low_complexity Low_complexity 1 29 0 9 707 1536 255 2 6 chrUextra 16005771 16006260 -12998396 - Gypsy11_I LTR Gypsy -137 3387 2901 9 707 6133 13 1 3 chrUextra 16006360 16007069 -12997587 - R1_DM LINE R1 -1354 4002 3295 9 707 2392 189 14 22 chrUextra 16007173 16007759 -12996897 + SAR_DM Satellite Satellite 496 1076 -396 9 707 526 126 87 0 chrUextra 16007774 16007877 -12996779 + SAR_DM Satellite Satellite 547 658 -814 9 707 3112 15 74 0 chrUextra 16007978 16008372 -12996284 + ROO_I LTR Pao 4864 5286 -2970 9 707 2531 48 48 0 chrUextra 16008354 16008687 -12995969 + ROO_I LTR Pao 5432 5780 -2476 9 707 2143 39 0 0 chrUextra 16008787 16009043 -12995613 - R1_DM LINE R1 -542 4814 4559 9 707 3836 13 4 7 chrUextra 16009041 16009496 -12995160 - R1_DM LINE R1 -1270 4086 3633 9 707 27 29 0 0 chrUextra 16009800 16009834 -12994822 + AT_rich Low_complexity Low_complexity 1 34 0 9 707 792 37 0 115 chrUextra 16010157 16010279 -12994377 + Baggins1 LINE LOA 5346 5453 0 9 707 2527 99 24 21 chrUextra 16011222 16011923 -12992733 - DMSAT6 Satellite Satellite 0 703 1 9 707 277 106 0 21 chrUextra 16012167 16012215 -12992441 - HMSBEAGLE_I LTR Gypsy -6308 221 175 9 707 316 85 67 17 chrUextra 16012237 16012297 -12992359 - HMSBEAGLE_I LTR Gypsy -6464 65 3 9 707 938 183 102 15 chrUextra 16012298 16012503 -12992153 - DMLTR5 LTR Gypsy 0 266 44 9 707 344 123 14 97 chrUextra 16012832 16012904 -12991752 + Baggins1 LINE LOA 5126 5191 -262 9 707 6219 0 1 0 chrUextra 16013641 16014350 -12990306 + ROO_I LTR Pao 6301 7010 -1246 9 707 6210 13 1 1 chrUextra 16014450 16015159 -12989497 + R1_DM LINE R1 3696 4404 -952 9 707 1088 0 26 20 chrUextra 16015259 16015410 -12989246 + NTS_DM Other Other 89 240 0 9 707 1910 0 17 17 chrUextra 16015410 16015650 -12989006 + NTS_DM Other Other 1 240 0 9 707 1355 6 0 18 chrUextra 16015650 16015815 -12988841 + NTS_DM Other Other 1 162 -78 9 707 306 70 0 0 chrUextra 16015925 16015968 -12988688 + NTS_DM Other Other 4 46 -194 9 707 1050 85 0 0 chrUextra 16016070 16016223 -12988433 - ARS406_DM Unknown Unknown -200 153 1 9 707 2970 180 40 7 chrUextra 16016104 16016777 -12987879 + SAR_DM Satellite Satellite 167 861 -611 9 707 6169 6 4 1 chrUextra 16016877 16017586 -12987070 - STALKER4_I LTR Gypsy -3829 2701 1991 9 707 782 40 20 0 chrUextra 16017686 16017786 -12986870 - TRANSPAC_I LTR Gypsy -4488 102 1 9 707 2989 6 0 0 chrUextra 16017786 16018116 -12986540 - TRANSPAC_LTR LTR Gypsy 0 330 1 9 707 2585 7 7 0 chrUextra 16018116 16018395 -12986261 - SSU-rRNA_Dme rRNA rRNA -1301 694 414 9 707 614 40 0 0 chrUextra 16018495 16018571 -12986085 + ACCORD2_I LTR Gypsy 1009 1084 -6128 9 707 4035 6 0 62 chrUextra 16018571 16019072 -12985584 - MICROPIA_LTR LTR Gypsy 0 476 7 9 707 883 39 7 66 chrUextra 16019067 16019204 -12985452 + R1_DM LINE R1 650 778 -4578 9 707 475 36 0 0 chrUextra 16019304 16019360 -12985296 - R1_DM LINE R1 -2175 3181 3126 9 707 5056 0 0 0 chrUextra 16019360 16019918 -12984738 - ACCORD_LTR LTR Gypsy 0 558 1 9 707 844 11 0 0 chrUextra 16019918 16020013 -12984643 - ACCORD_I LTR Gypsy 0 6288 6194 9 707 6396 1 0 0 chrUextra 16020113 16020822 -12983834 + R1_DM LINE R1 2464 3172 -2184 9 707 2517 9 3 0 chrUextra 16020922 16021250 -12983406 + STALKER4_I LTR Gypsy 6191 6519 -11 9 707 2891 3 0 6 chrUextra 16021245 16021574 -12983082 + STALKER4_LTR LTR Gypsy 76 402 0 9 707 766 0 0 0 chrUextra 16021731 16021817 -12982839 - NTS_DM Other Other -117 123 38 9 707 907 9 0 27 chrUextra 16021817 16021929 -12982727 - NTS_DM Other Other -107 133 25 9 707 1304 18 0 6 chrUextra 16021981 16022146 -12982510 - NTS_DM Other Other -39 201 38 9 707 895 18 0 27 chrUextra 16022146 16022258 -12982398 - NTS_DM Other Other -107 133 25 9 707 22 56 0 0 chrUextra 16022284 16022320 -12982336 + AT_rich Low_complexity Low_complexity 1 36 0 9 707 269 125 0 0 chrUextra 16022333 16022373 -12982283 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 707 51 31 0 0 chrUextra 16022569 16022634 -12982022 + AT_rich Low_complexity Low_complexity 1 65 0 9 707 22 35 0 0 chrUextra 16022811 16022840 -12981816 + AT_rich Low_complexity Low_complexity 1 29 0 9 707 47 33 0 0 chrUextra 16023132 16023193 -12981463 + AT_rich Low_complexity Low_complexity 1 61 0 9 707 2011 185 10 10 chrUextra 16024165 16024867 -12979789 + SAR_DM Satellite Satellite 1 702 -558 9 707 4505 30 46 4 chrUextra 16025095 16025230 -12979426 + DMRT1B LINE R1 1 141 -5042 9 707 180 0 0 0 chrUextra 16025230 16025250 -12979406 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 9 707 4505 30 46 4 chrUextra 16025250 16025676 -12978980 + DMRT1B LINE R1 142 584 -4599 9 707 6336 14 0 0 chrUextra 16025776 16026485 -12978171 + DIVER_I LTR Pao 2478 3186 -2457 9 707 6416 3 0 0 chrUextra 16026585 16027294 -12977362 - DOC LINE Jockey -652 4073 3365 9 707 1733 62 0 0 chrUextra 16027394 16027619 -12977037 + R1_DM LINE R1 393 617 -4739 9 707 2954 57 221 2 chrUextra 16027590 16028103 -12976553 + R1_DM LINE R1 1262 1887 -3469 9 707 6230 14 1 1 chrUextra 16028203 16028912 -12975744 + Copia2_I LTR Copia 1445 2153 -2009 9 707 2441 90 25 65 chrUextra 16029012 16029720 -12974936 + DMSAT6 Satellite Satellite 1 679 -110 9 707 34 24 0 0 chrUextra 16030046 16030087 -12974569 + AT_rich Low_complexity Low_complexity 1 41 0 9 707 6019 11 6 0 chrUextra 16030630 16031339 -12973317 - ROO_I LTR Pao -2901 5355 4643 9 707 6180 6 20 0 chrUextra 16031439 16032148 -12972508 + DM176_I LTR Gypsy 3318 4040 -2380 9 707 6260 3 0 0 chrUextra 16032248 16032957 -12971699 - ROO_I LTR Pao -3781 4475 3767 9 707 2119 310 3 3 chrUextra 16033075 16033761 -12970895 - Invader1_I LTR Gypsy -922 2264 1579 9 707 1740 0 0 0 chrUextra 16034675 16034864 -12969792 + R1_DM LINE R1 5168 5356 0 9 707 4734 4 0 0 chrUextra 16034862 16035384 -12969272 + LSU-rRNA_Dme rRNA rRNA 2640 3161 -739 9 707 3560 61 45 0 chrUextra 16035702 16036193 -12968463 - PROTOP_A DNA P 0 1105 593 9 707 5887 8 0 0 chrUextra 16036293 16036961 -12967695 - DOC2_DM LINE Jockey -1611 3182 2515 9 707 368 67 82 16 chrUextra 16036941 16037002 -12967654 - DOC2_DM LINE Jockey -2482 2311 2247 9 707 2799 3 0 0 chrUextra 16037102 16037410 -12967246 - LSU-rRNA_Dme rRNA rRNA -953 2947 2640 9 707 3638 2 2 0 chrUextra 16037408 16037811 -12966845 - R1_DM LINE R1 0 5356 4953 9 707 3743 58 39 0 chrUextra 16038004 16038612 -12966044 - PROTOP_A DNA P 0 1105 570 9 707 3141 180 10 17 chrUextra 16038722 16039429 -12965227 - SAR_DM Satellite Satellite -496 976 275 9 707 3578 58 69 7 chrUextra 16039556 16040235 -12964421 - PROTOP_A DNA P 0 1105 520 9 707 6472 4 0 0 chrUextra 16040338 16041047 -12963609 - SSU-rRNA_Dme rRNA rRNA -1098 897 189 9 707 3202 164 16 19 chrUextra 16041153 16041854 -12962802 - SAR_DM Satellite Satellite -569 903 205 9 707 3226 174 9 7 chrUextra 16041962 16042649 -12962007 - SAR_DM Satellite Satellite -593 879 192 9 707 28 48 0 0 chrUextra 16042996 16043038 -12961618 + AT_rich Low_complexity Low_complexity 1 42 0 9 707 6319 1 1 1 chrUextra 16043574 16044283 -12960373 + ROO_I LTR Pao 5090 5798 -2458 9 707 5372 5 2 8 chrUextra 16044383 16045007 -12959649 + DOC LINE Jockey 4105 4724 -1 9 707 32 0 0 0 chrUextra 16045400 16045432 -12959224 + AT_rich Low_complexity Low_complexity 1 32 0 9 707 3062 3 0 0 chrUextra 16045564 16045901 -12958755 + SSU-rRNA_Dme rRNA rRNA 1 337 -1658 9 707 1301 102 0 0 chrUextra 16046001 16046187 -12958469 + Gypsy12_I LTR Gypsy 2485 2670 -2876 9 707 3798 100 0 9 chrUextra 16046178 16046705 -12957951 + Gypsy12_I LTR Gypsy 2811 3332 -2214 9 707 6136 20 1 0 chrUextra 16046810 16047519 -12957137 - R1_DM LINE R1 -2318 3038 2329 9 707 4431 48 33 24 chrUextra 16047619 16048328 -12956328 + BATUMI_I LTR Pao 27 810 -7153 9 707 1246 6 24 18 chrUextra 16048431 16048601 -12956055 + NTS_DM Other Other 70 240 0 9 707 1355 6 0 18 chrUextra 16048601 16048766 -12955890 + NTS_DM Other Other 1 162 -78 9 707 502 131 36 0 chrUextra 16048876 16048960 -12955696 + NTS_DM Other Other 4 90 -150 9 707 2341 25 43 0 chrUextra 16049237 16049514 -12955142 + DIVER2_I LTR Pao 3341 3629 -518 9 707 3462 24 0 28 chrUextra 16049514 16049946 -12954710 + PROTOP DNA P 1 420 -4060 9 707 3624 110 110 37 chrUextra 16050046 16050755 -12953901 - BATUMI_I LTR Pao -6440 1523 763 9 707 514 119 36 0 chrUextra 16051091 16051175 -12953481 - NTS_DM Other Other -150 90 4 9 707 1355 6 0 18 chrUextra 16051285 16051450 -12953206 - NTS_DM Other Other -78 162 1 9 707 781 9 35 26 chrUextra 16051450 16051564 -12953092 - NTS_DM Other Other 0 240 126 9 707 2660 3 3 0 chrUextra 16051664 16051960 -12952696 - SSU-rRNA_Dme rRNA rRNA -1698 297 1 9 707 32 0 0 0 chrUextra 16052092 16052124 -12952532 + AT_rich Low_complexity Low_complexity 1 32 0 9 707 2186 180 16 10 chrUextra 16052473 16053182 -12951474 - SAR_DM Satellite Satellite -470 713 1 9 707 884 27 0 9 chrUextra 16053282 16053392 -12951264 + CIRCE LINE Composite 4387 4495 -1861 9 707 3773 106 7 5 chrUextra 16053392 16053991 -12950665 + S_DM DNA Tc1 1 600 -1136 9 707 3345 168 11 9 chrUextra 16054100 16054797 -12949859 - SAR_DM Satellite Satellite -396 1076 378 9 707 3806 0 0 0 chrUextra 16054900 16055314 -12949342 - LSU-rRNA_Dme rRNA rRNA -1699 2201 1788 9 707 2101 0 8 8 chrUextra 16055358 16055609 -12949047 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1538 9 707 2577 0 0 0 chrUextra 16055711 16055995 -12948661 + LSU-rRNA_Dme rRNA rRNA 3617 3900 0 9 707 22 56 0 0 chrUextra 16056067 16056103 -12948553 + AT_rich Low_complexity Low_complexity 1 36 0 9 707 262 150 0 0 chrUextra 16056108 16056148 -12948508 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 707 262 150 0 0 chrUextra 16056200 16056240 -12948416 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 707 262 150 0 0 chrUextra 16056292 16056332 -12948324 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 707 245 174 0 21 chrUextra 16056363 16056410 -12948246 + LSU-rRNA_Dme rRNA rRNA 2570 2615 -1285 9 707 296 0 0 0 chrUextra 16056520 16056552 -12948104 - NTS_DM Other Other -171 69 38 9 707 936 9 0 27 chrUextra 16056552 16056664 -12947992 - NTS_DM Other Other -107 133 25 9 707 22 56 0 0 chrUextra 16056691 16056727 -12947929 + AT_rich Low_complexity Low_complexity 1 36 0 9 707 278 176 0 19 chrUextra 16056740 16056792 -12947864 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 707 268 196 0 19 chrUextra 16056823 16056875 -12947781 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 707 268 196 0 19 chrUextra 16056915 16056967 -12947689 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 707 268 196 0 19 chrUextra 16057007 16057059 -12947597 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 707 592 0 15 0 chrUextra 16057160 16057227 -12947429 - LSU-rRNA_Dme rRNA rRNA 0 3900 3833 9 707 6067 6 38 0 chrUextra 16057327 16058036 -12946620 + DM176_I LTR Gypsy 900 1635 -4785 9 707 6123 24 1 1 chrUextra 16058141 16058845 -12945811 - R1_DM LINE R1 -528 4828 4125 9 707 6549 0 3 1 chrUextra 16058945 16059653 -12945003 - SSU-rRNA_Dme rRNA rRNA -103 1892 1184 9 707 21 89 0 0 chrUextra 16059869 16059925 -12944731 + AT_rich Low_complexity Low_complexity 1 56 0 9 707 26 30 0 0 chrUextra 16060062 16060095 -12944561 + AT_rich Low_complexity Low_complexity 1 33 0 9 707 5197 46 65 1 chrUextra 16060563 16061272 -12943384 - PROTOP DNA P -3727 753 22 9 707 6307 16 0 3 chrUextra 16061372 16062081 -12942575 - G_DM LINE Jockey -1020 3326 2620 9 707 6443 3 1 1 chrUextra 16062181 16062890 -12941766 + G_DM LINE Jockey 1473 2181 -2165 9 707 6502 4 0 0 chrUextra 16062993 16063699 -12940957 + IDEFIX_I LTR Gypsy 1494 2199 -3429 9 707 1218 34 0 0 chrUextra 16063799 16063946 -12940710 + (CACAA)n Simple_repeat Simple_repeat 2 148 0 9 707 4434 6 8 10 chrUextra 16063986 16064508 -12940148 + DMRT1B LINE R1 403 923 -4260 9 707 2717 25 13 0 chrUextra 16064608 16064926 -12939730 - Invader2_I LTR Gypsy -1377 3215 2894 9 707 3098 47 8 3 chrUextra 16064935 16065317 -12939339 - Baggins1 LINE LOA -2508 2945 2562 9 707 725 0 0 0 chrUextra 16065417 16065498 -12939158 + 5S_DM RNA RNA 55 135 0 9 707 1186 15 0 7 chrUextra 16065722 16065858 -12938798 + 5S_DM RNA RNA 1 135 0 9 707 395 0 0 0 chrUextra 16066082 16066126 -12938530 + 5S_DM RNA RNA 1 44 -91 9 707 28 48 0 0 chrUextra 16066512 16066554 -12938102 + AT_rich Low_complexity Low_complexity 1 42 0 9 707 32 0 0 0 chrUextra 16066883 16066915 -12937741 + AT_rich Low_complexity Low_complexity 1 32 0 9 707 596 303 28 14 chrUextra 16067058 16067346 -12937310 + TV1I LTR Gypsy 681 972 -4991 9 707 506 130 0 0 chrUextra 16067603 16067680 -12936976 - DM412 LTR Gypsy -1489 5408 5332 9 707 225 222 0 0 chrUextra 16067677 16067731 -12936925 + QUASIMODO_I LTR Gypsy 1313 1366 -4694 9 707 2361 95 7 58 chrUextra 16067844 16068553 -12936103 + DMSAT6 Satellite Satellite 1 672 -97 9 707 2464 59 0 75 chrUextra 16068724 16069070 -12935586 + CIRCE LINE Composite 973 1292 -5064 9 707 660 363 22 28 chrUextra 16068783 16069293 -12935363 + Gypsy12_I LTR Gypsy 2863 3369 -2177 9 707 1591 29 0 93 chrUextra 16069136 16069362 -12935294 + CIRCE LINE Composite 1305 1509 -4847 9 707 2006 0 17 13 chrUextra 16069464 16069703 -12934953 - NTS_DM Other Other 0 240 1 9 707 1995 4 17 13 chrUextra 16069703 16069942 -12934714 - NTS_DM Other Other 0 240 1 9 707 1674 45 18 18 chrUextra 16069942 16070171 -12934485 - NTS_DM Other Other 0 240 12 9 707 1925 145 36 33 chrUextra 16070271 16070690 -12933966 - STALKER4_I LTR Gypsy -5773 757 228 9 707 28 48 0 0 chrUextra 16070690 16070732 -12933924 + AT_rich Low_complexity Low_complexity 1 42 0 9 707 848 109 3 49 chrUextra 16070818 16070980 -12933676 - STALKER4_LTR LTR Gypsy -3 399 249 9 707 5452 68 21 4 chrUextra 16071888 16072596 -12932060 - FB4_DM DNA Tc1 -1513 2576 1857 9 707 6030 25 10 1 chrUextra 16072696 16073404 -12931252 - R1_DM LINE R1 -1931 3425 2712 9 707 2693 195 11 11 chrUextra 16074314 16075020 -12929636 + SAR_DM Satellite Satellite 1 705 -677 9 707 509 16 0 0 chrUextra 16075120 16075182 -12929474 + NTS_DM Other Other 72 133 -107 9 707 1350 18 0 6 chrUextra 16075182 16075347 -12929309 + NTS_DM Other Other 38 201 -39 9 707 936 9 0 27 chrUextra 16075399 16075511 -12929145 + NTS_DM Other Other 25 133 -107 9 707 1350 18 0 6 chrUextra 16075511 16075676 -12928980 + NTS_DM Other Other 38 201 -39 9 707 21 57 0 0 chrUextra 16075676 16075711 -12928945 + AT_rich Low_complexity Low_complexity 1 35 0 9 707 628 23 11 55 chrUextra 16075737 16075828 -12928828 + NTS_DM Other Other 25 111 -129 9 707 6479 6 0 0 chrUextra 16075928 16076636 -12928020 - DMRT1A LINE R1 -2543 2640 1933 9 707 954 76 6 21 chrUextra 16076736 16077444 -12927212 + RSP Satellite Satellite 1 697 0 9 707 436 136 549 124 chrUextra 16077547 16077689 -12926967 - DMCR1A LINE CR1 -3359 1111 910 9 707 2366 186 94 13 chrUextra 16077702 16078242 -12926414 - DMCR1A LINE CR1 -3718 752 169 9 707 5957 41 0 0 chrUextra 16078352 16079060 -12925596 + R1_DM LINE R1 1222 1929 -3427 9 707 6170 11 1 3 chrUextra 16079160 16079868 -12924788 + STALKER4_I LTR Gypsy 4642 5348 -1182 9 707 2845 180 90 28 chrUextra 16079968 16080676 -12923980 + HETA LINE telomeric 4515 5266 -815 9 707 6437 1 1 6 chrUextra 16080776 16081483 -12923173 + LSU-rRNA_Dme rRNA rRNA 822 1525 -2375 9 707 6151 37 0 0 chrUextra 16081584 16082292 -12922364 + DIVER_I LTR Pao 331 1038 -4605 9 707 3335 166 11 21 chrUextra 16082398 16083096 -12921560 + SAR_DM Satellite Satellite 400 1090 -382 9 707 6119 25 3 1 chrUextra 16083200 16083908 -12920748 - R1_DM LINE R1 -298 5058 4350 9 707 6212 16 0 0 chrUextra 16084008 16084716 -12919940 - ROO_I LTR Pao -3204 5052 4345 9 707 6380 0 1 1 chrUextra 16084816 16085524 -12919132 - R1_DM LINE R1 -3650 1706 999 9 707 5989 0 1 35 chrUextra 16085627 16086332 -12918324 - LSU-rRNA_Dme rRNA rRNA -3023 877 197 9 707 6529 1 1 3 chrUextra 16086432 16087140 -12917516 - LSU-rRNA_Dme rRNA rRNA -264 3636 2930 9 707 732 195 13 25 chrUextra 16087247 16087405 -12917251 + HETRP_DM Satellite Satellite 1529 1684 -188 9 707 713 219 6 52 chrUextra 16087505 16087678 -12916978 + HETRP_DM Satellite Satellite 1518 1682 -190 9 707 719 186 7 14 chrUextra 16087800 16087942 -12916714 + HETRP_DM Satellite Satellite 1529 1669 -203 9 707 435 19 0 0 chrUextra 16088048 16088100 -12916556 + (TTCTC)n Simple_repeat Simple_repeat 5 56 0 9 707 1182 7 0 0 chrUextra 16088110 16088245 -12916411 + (GAGAA)n Simple_repeat Simple_repeat 2 136 0 9 707 1189 98 0 0 chrUextra 16088856 16089019 -12915637 - HETA LINE telomeric -3490 2591 2429 9 707 1937 66 7 39 chrUextra 16089017 16089299 -12915357 - HETA LINE telomeric -3915 2166 1894 9 707 2024 79 0 0 chrUextra 16089298 16089564 -12915092 - HETA LINE telomeric -4524 1557 1292 9 707 257 146 0 0 chrUextra 16089711 16089752 -12914904 + DMCR1A LINE CR1 744 784 -3686 9 707 268 208 0 0 chrUextra 16089891 16089944 -12914712 + NOMAD_I LTR Gypsy 6520 6572 0 9 707 420 122 176 0 chrUextra 16090292 16090366 -12914290 - DNAREP1_DM LINE Penelope -201 393 307 9 707 6608 0 0 1 chrUextra 16090472 16091180 -12913476 - LSU-rRNA_Dme rRNA rRNA -757 3143 2437 9 707 6068 28 0 1 chrUextra 16091280 16091988 -12912668 + G2_DM LINE Jockey 1493 2199 -903 9 707 2818 190 35 28 chrUextra 16092109 16092791 -12911865 + SAR_DM Satellite Satellite 322 1008 -464 9 707 1054 305 46 44 chrUextra 16092908 16093588 -12911068 + Copia2_I LTR Copia 1402 2085 -1891 9 707 3789 23 0 2 chrUextra 16093704 16094137 -12910519 + R1_DM LINE R1 4925 5356 0 9 707 1785 70 12 0 chrUextra 16094170 16094412 -12910244 + R1_DM LINE R1 1 245 -5111 9 707 1105 78 0 0 chrUextra 16094512 16094666 -12909990 - ARS406_DM Unknown Unknown -199 154 1 9 707 3250 176 10 8 chrUextra 16094547 16095218 -12909438 + SAR_DM Satellite Satellite 167 839 -633 9 707 2320 276 11 20 chrUextra 16095333 16096028 -12908628 + Invader4_I LTR Gypsy 151 839 -1574 9 707 6505 6 0 0 chrUextra 16096128 16096836 -12907820 + R2_DM LINE R2 2433 3140 -467 9 707 3443 5 3 3 chrUextra 16097266 16097644 -12907012 - SSU-rRNA_Dme rRNA rRNA 0 1995 1618 9 707 428 119 55 9 chrUextra 16097749 16097859 -12906797 + CT-rich Low_complexity Low_complexity 5 119 0 9 707 327 164 38 19 chrUextra 16097878 16097984 -12906672 + GA-rich Low_complexity Low_complexity 2 109 0 9 707 3247 186 6 9 chrUextra 16098562 16099260 -12905396 + SAR_DM Satellite Satellite 195 890 -582 9 707 6194 19 0 6 chrUextra 16099360 16100068 -12904588 - FW_DM LINE Jockey -2119 2573 1870 9 707 6099 16 6 0 chrUextra 16100168 16100854 -12903802 + ACCORD2_I LTR Gypsy 102 791 -6421 9 707 659 199 7 52 chrUextra 16101145 16101299 -12903357 - HETRP_DM Satellite Satellite -208 1664 1518 9 707 721 195 13 25 chrUextra 16101400 16101558 -12903098 - HETRP_DM Satellite Satellite -188 1684 1529 9 707 3505 183 6 6 chrUextra 16101786 16102491 -12902165 - SAR_DM Satellite Satellite -416 1056 352 9 707 6473 1 3 0 chrUextra 16102592 16103300 -12901356 + FW_DM LINE Jockey 626 1335 -3357 9 707 6383 18 3 0 chrUextra 16103400 16104108 -12900548 - Gypsy12_I LTR Gypsy -841 4705 3996 9 707 385 343 27 33 chrUextra 16104349 16104795 -12899861 + BLASTOPIA_I LTR Gypsy 3541 4185 -703 9 707 6289 13 1 1 chrUextra 16105019 16105724 -12898932 + FW_DM LINE Jockey 3184 3888 -804 9 707 28 48 0 0 chrUextra 16106046 16106088 -12898568 + AT_rich Low_complexity Low_complexity 1 42 0 9 707 32 0 0 0 chrUextra 16106416 16106448 -12898208 + AT_rich Low_complexity Low_complexity 1 32 0 9 707 6064 16 0 6 chrUextra 16106632 16107316 -12897340 + BATUMI_I LTR Pao 5741 6420 -1543 9 707 5450 2 3 0 chrUextra 16107440 16108027 -12896629 - HOBO DNA hAT -2427 589 1 9 707 6495 1 1 4 chrUextra 16108248 16108956 -12895700 + SSU-rRNA_Dme rRNA rRNA 489 1194 -801 9 707 2254 20 0 0 chrUextra 16109056 16109307 -12895349 - MDG1_LTR LTR Gypsy -105 337 87 9 707 423 100 0 0 chrUextra 16109307 16109377 -12895279 + (TTA)n Simple_repeat Simple_repeat 3 72 0 9 707 2291 9 342 0 chrUextra 16109381 16109764 -12894892 - MDG1_I LTR Gypsy -98 6799 6096 9 707 6422 1 3 4 chrUextra 16109864 16110572 -12894084 + SSU-rRNA_Dme rRNA rRNA 803 1509 -486 9 707 6257 4 3 3 chrUextra 16110672 16111380 -12893276 + R1_DM LINE R1 3483 4190 -1166 9 707 37 39 0 0 chrUextra 16111665 16111716 -12892940 + AT_rich Low_complexity Low_complexity 1 51 0 9 707 22 35 0 0 chrUextra 16111817 16111846 -12892810 + AT_rich Low_complexity Low_complexity 1 29 0 9 707 21 57 0 0 chrUextra 16112043 16112078 -12892578 + AT_rich Low_complexity Low_complexity 1 35 0 9 707 920 9 0 0 chrUextra 16112078 16112188 -12892468 + ALUII_DM Unknown Unknown 1 110 -130 9 707 6062 1 3 3 chrUextra 16112288 16112996 -12891660 + SSU-rRNA_Dme rRNA rRNA 764 1471 -524 9 707 6220 0 1 0 chrUextra 16113096 16113804 -12890852 - R2_DM LINE R2 -1112 2495 1787 9 707 1995 58 20 30 chrUextra 16113904 16114207 -12890449 - Gypsy12_I LTR Gypsy -5246 300 1 9 707 328 211 34 34 chrUextra 16114221 16114368 -12890288 - Gypsy12A_LTR LTR Gypsy -553 1727 1581 9 707 652 156 124 38 chrUextra 16114426 16114612 -12890044 - Gypsy12_LTR LTR Gypsy -828 1508 1307 9 707 5820 13 16 0 chrUextra 16114712 16115420 -12889236 - DMRT1B LINE R1 -1704 3479 2761 9 707 2864 183 24 10 chrUextra 16115520 16116226 -12888430 - SAR_DM Satellite Satellite -552 920 205 9 707 1894 300 8 10 chrUextra 16116328 16117036 -12887620 - MICROPIA_I LTR Gypsy -1076 3400 2694 9 707 2607 195 42 11 chrUextra 16117137 16117844 -12886812 - SAR_DM Satellite Satellite -281 1191 463 9 707 811 0 0 0 chrUextra 16117944 16118036 -12886620 - MDG1_I LTR Gypsy -6504 92 1 9 707 2917 22 0 0 chrUextra 16118036 16118392 -12886264 - MDG1_LTR LTR Gypsy 0 442 87 9 707 423 100 0 0 chrUextra 16118392 16118462 -12886194 + (TTA)n Simple_repeat Simple_repeat 3 72 0 9 707 411 283 18 6 chrUextra 16118478 16118645 -12886011 - Gypsy12_LTR LTR Gypsy -447 1889 1721 9 707 2076 148 78 28 chrUextra 16118790 16119422 -12885234 + Stalker2_I LTR Gypsy 291 999 -5531 9 707 1715 14 19 0 chrUextra 16119560 16119774 -12884882 + DM176_LTR LTR Gypsy 290 507 0 9 707 3574 35 0 8 chrUextra 16119774 16120263 -12884393 + DM176_I LTR Gypsy 1 485 -5935 9 707 6094 1 0 0 chrUextra 16120368 16121076 -12883580 - G2_DM LINE Jockey -1968 1134 427 9 707 561 30 0 0 chrUextra 16121260 16121327 -12883329 + (TAA)n Simple_repeat Simple_repeat 2 68 0 9 707 1672 5 0 0 chrUextra 16121327 16121525 -12883131 - Copia2_LTR_DM LTR Copia 0 198 1 9 88 2968 8 0 0 chrUextra 16121525 16121884 -12882772 - Copia2_I LTR Copia 0 4162 3804 9 708 5949 13 1 0 chrUextra 16121984 16122692 -12881964 - FW_DM LINE Jockey -230 4462 3754 9 708 1167 7 0 0 chrUextra 16122968 16123103 -12881553 + 5S_DM RNA RNA 1 135 0 9 708 1176 0 0 0 chrUextra 16123334 16123469 -12881187 + 5S_DM RNA RNA 1 135 0 9 708 966 0 0 0 chrUextra 16123600 16123710 -12880946 - ROO_I LTR Pao -8146 110 1 9 708 3719 2 0 2 chrUextra 16123710 16124139 -12880517 - ROO_LTR LTR Pao 0 428 1 9 708 2441 19 3 0 chrUextra 16124408 16124731 -12879925 + ROVER-I_DM LTR Gypsy 5008 5331 -1253 9 708 2747 3 0 3 chrUextra 16124780 16125116 -12879540 + ROVER-I_DM LTR Gypsy 5308 5642 -942 9 708 300 165 48 58 chrUextra 16125216 16125319 -12879337 + XDMR_DM Unknown Unknown 259 360 0 9 708 2846 170 14 22 chrUextra 16125234 16125924 -12878732 - SAR_DM Satellite Satellite -354 1118 434 9 708 1776 5 0 0 chrUextra 16126024 16126229 -12878427 - SSU-rRNA_Dme rRNA rRNA -1790 205 1 9 708 32 0 0 0 chrUextra 16126361 16126393 -12878263 + AT_rich Low_complexity Low_complexity 1 32 0 9 708 3041 177 6 6 chrUextra 16126834 16127504 -12877152 + SAR_DM Satellite Satellite 234 903 -569 9 708 225 35 0 0 chrUextra 16127511 16127540 -12877116 - ARS406_DM Unknown Unknown -195 158 130 9 708 657 236 156 46 chrUextra 16127800 16128128 -12876528 - GTWIN_LTR LTR Gypsy -90 405 42 9 708 842 240 0 10 chrUextra 16128131 16128347 -12876309 - GTWIN_I LTR Gypsy 0 6421 6244 9 708 1167 7 0 0 chrUextra 16128465 16128600 -12876056 - 5S_DM RNA RNA 0 135 1 9 708 1176 0 0 0 chrUextra 16128838 16128973 -12875683 - 5S_DM RNA RNA 0 135 1 9 708 2149 192 6 37 chrUextra 16129290 16129964 -12874692 + SAR_DM Satellite Satellite 1 652 -545 9 708 2219 161 9 13 chrUextra 16130064 16130768 -12873888 - SAR_DM Satellite Satellite -467 700 1 9 708 6048 4 0 3 chrUextra 16130872 16131580 -12873076 - G_DM LINE Jockey -1012 3334 2629 9 708 3129 170 10 11 chrUextra 16131681 16132388 -12872268 + SAR_DM Satellite Satellite 299 1004 -468 9 708 6169 0 0 1 chrUextra 16132488 16133196 -12871460 - DM1731_I LTR Copia -895 3081 2375 9 708 5702 3 0 0 chrUextra 16133296 16133950 -12870706 - LSU-rRNA_Dme rRNA rRNA -607 3293 2640 9 708 484 0 0 0 chrUextra 16133948 16134004 -12870652 - R1_DM LINE R1 0 5356 5301 9 708 2975 172 30 20 chrUextra 16134111 16134812 -12869844 - SAR_DM Satellite Satellite -467 1005 298 9 708 4443 1 215 38 chrUextra 16134912 16135619 -12869037 - ROVER-I_DM LTR Gypsy -5752 832 1 9 708 2599 195 16 14 chrUextra 16135720 16136428 -12868228 + SAR_DM Satellite Satellite 1 709 -300 9 708 4115 97 22 2 chrUextra 16136528 16137236 -12867420 - BATUMI_I LTR Pao -2837 5077 4281 9 708 6071 0 4 3 chrUextra 16137336 16138044 -12866612 - SSU-rRNA_Dme rRNA rRNA -164 1831 1123 9 708 1047 83 6 17 chrUextra 16138956 16139128 -12865528 + TAHRE LINE telomeric 10281 10450 -13 9 708 3862 90 0 0 chrUextra 16139125 16139660 -12864996 + TAHRE LINE telomeric 1999 2533 -7930 9 708 2260 82 0 48 chrUextra 16139760 16140468 -12864188 + DMSAT6 Satellite Satellite 1 674 -92 9 708 3281 234 35 18 chrUextra 16140568 16142073 -12862583 + SAR_DM Satellite Satellite 1 1529 -208 9 708 2270 170 21 11 chrUextra 16142204 16142879 -12861777 + SAR_DM Satellite Satellite 1 682 -749 9 708 5518 11 0 0 chrUextra 16142992 16143700 -12860956 - DM176_I LTR Gypsy -32 6388 5681 9 708 2121 115 14 14 chrUextra 16143800 16144500 -12860156 - DMSAT6 Satellite Satellite -80 700 1 9 708 288 0 0 0 chrUextra 16144608 16144640 -12860016 + (TAA)n Simple_repeat Simple_repeat 3 34 0 9 708 1672 5 0 0 chrUextra 16144640 16144838 -12859818 - Copia2_LTR_DM LTR Copia 0 198 1 9 708 3999 13 0 0 chrUextra 16144838 16145316 -12859340 - Copia2_I LTR Copia 0 4162 3685 9 708 2720 178 30 26 chrUextra 16145431 16146122 -12858534 - SAR_DM Satellite Satellite -354 1118 425 9 708 5626 27 0 0 chrUextra 16146224 16146932 -12857724 + STALKER4_I LTR Gypsy 3171 3878 -2652 9 708 1720 20 0 0 chrUextra 16147032 16147236 -12857420 - PROTOP_A DNA P -901 204 1 9 708 2949 93 18 44 chrUextra 16147236 16147740 -12856916 + TART LINE telomeric 6926 7416 -7061 9 708 373 194 87 10 chrUextra 16147897 16148001 -12856655 - DNAREP1_DM LINE Penelope -416 178 67 9 708 506 225 70 0 chrUextra 16148135 16148277 -12856379 + HETRP_DM Satellite Satellite 1518 1669 -203 9 708 614 179 32 16 chrUextra 16148422 16148547 -12856109 + HETRP_DM Satellite Satellite 1518 1644 -228 9 708 2886 175 38 10 chrUextra 16149463 16150156 -12854500 + SAR_DM Satellite Satellite 192 903 -569 9 708 852 0 0 0 chrUextra 16150264 16150362 -12854294 - FW_DM LINE Jockey -4594 98 1 9 708 2310 4 4 11 chrUextra 16150696 16150972 -12853684 - SSU-rRNA_Dme rRNA rRNA 0 1995 1722 9 708 2849 196 20 23 chrUextra 16151072 16151778 -12852878 + SAR_DM Satellite Satellite 1 704 -216 9 708 6096 0 3 3 chrUextra 16151880 16152588 -12852068 + SSU-rRNA_Dme rRNA rRNA 1002 1709 -286 9 708 1750 18 64 0 chrUextra 16152688 16152907 -12851749 + Invader2_LTR LTR Gypsy 34 266 0 9 708 26 0 0 0 chrUextra 16152914 16152940 -12851716 + AT_rich Low_complexity Low_complexity 1 26 0 9 708 284 75 109 24 chrUextra 16152944 16153109 -12851547 + (TA)n Simple_repeat Simple_repeat 1 179 0 9 708 318 186 31 0 chrUextra 16153119 16153216 -12851440 + (TATAA)n Simple_repeat Simple_repeat 5 104 0 9 708 461 6 129 31 chrUextra 16153218 16153381 -12851275 + (TA)n Simple_repeat Simple_repeat 1 179 0 9 708 5922 1 0 0 chrUextra 16153496 16154204 -12850452 - ROVER-I_DM LTR Gypsy -4037 2547 1840 9 708 3371 102 74 94 chrUextra 16154311 16155012 -12849644 + TART LINE telomeric 6985 7671 -6806 9 708 880 72 4 19 chrUextra 16155128 16155810 -12848846 + RSP Satellite Satellite 1 672 0 9 708 2443 182 68 31 chrUextra 16155921 16156628 -12848028 - SAR_DM Satellite Satellite -281 1191 459 9 708 2068 149 13 90 chrUextra 16156731 16157254 -12847402 - TART LINE telomeric -7383 7094 6655 9 708 786 112 53 41 chrUextra 16157270 16157436 -12847220 - TART LINE telomeric -10448 4029 3883 9 708 5878 17 8 0 chrUextra 16157538 16158244 -12846412 + DMRT1A LINE R1 3601 4312 -871 9 708 3996 49 7 2 chrUextra 16158344 16158892 -12845764 - IDEFIX_I LTR Gypsy -4399 1229 679 9 708 1194 38 6 0 chrUextra 16158892 16159052 -12845604 - IDEFIX_I LTR Gypsy -5311 317 157 9 708 21 0 0 0 chrUextra 16159784 16159805 -12844851 + AT_rich Low_complexity Low_complexity 1 21 0 9 708 2773 187 29 25 chrUextra 16159960 16160668 -12843988 - SAR_DM Satellite Satellite -1035 711 1 9 708 5163 28 0 47 chrUextra 16160768 16161476 -12843180 + MAX_I LTR Pao 6806 7480 -434 9 708 240 267 0 0 chrUextra 16161622 16161682 -12842974 + TV1I LTR Gypsy 5903 5962 -1 9 708 2973 192 14 22 chrUextra 16162387 16163092 -12841564 + SAR_DM Satellite Satellite 1 699 -208 9 708 5988 1 0 1 chrUextra 16163192 16163900 -12840756 + LSU-rRNA_Dme rRNA rRNA 392 1098 -2802 9 708 2950 166 14 14 chrUextra 16164018 16164708 -12839948 + SAR_DM Satellite Satellite 326 1015 -457 9 708 697 193 0 7 chrUextra 16165260 16165406 -12839250 + DMLTR5 LTR Gypsy 122 266 0 9 708 351 49 65 16 chrUextra 16165405 16165467 -12839189 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 9 708 268 213 0 0 chrUextra 16166254 16166315 -12838341 + DM176_I LTR Gypsy 1839 1899 -4521 9 708 6113 0 0 0 chrUextra 16166424 16167132 -12837524 - Invader6_I LTR Gypsy -209 3890 3183 9 708 2743 80 68 13 chrUextra 16167232 16167940 -12836716 - Gypsy12_I LTR Gypsy -27 5519 4773 9 708 5948 4 0 0 chrUextra 16168040 16168748 -12835908 - MDG1_I LTR Gypsy -1479 5117 4410 9 708 2586 81 13 10 chrUextra 16168848 16169556 -12835100 - DMSAT6 Satellite Satellite -73 709 1 9 708 1322 259 110 22 chrUextra 16169684 16170364 -12834292 + ROVER-I_DM LTR Gypsy 545 1284 -5300 9 708 1936 9 0 0 chrUextra 16170464 16170687 -12833969 + DMLTR5 LTR Gypsy 44 266 0 9 708 1158 122 0 0 chrUextra 16170687 16171171 -12833485 + (TA)n Simple_repeat Simple_repeat 1 484 0 9 708 3647 0 0 54 chrUextra 16171514 16171979 -12832677 + LSU-rRNA_Dme rRNA rRNA 1 440 -3460 9 708 4067 77 82 2 chrUextra 16173696 16174280 -12830376 + Gypsy12_I LTR Gypsy 4916 5546 0 9 708 563 168 8 48 chrUextra 16174279 16174404 -12830252 + Gypsy12_LTR LTR Gypsy 1 120 -2216 9 708 4457 2 0 0 chrUextra 16174504 16175011 -12829645 - SSU-rRNA_Dme rRNA rRNA -1488 507 1 9 708 32 0 0 0 chrUextra 16175143 16175175 -12829481 + AT_rich Low_complexity Low_complexity 1 32 0 9 708 3794 116 11 9 chrUextra 16175313 16176020 -12828636 - Gypsy2_I LTR Gypsy -4982 2030 1269 9 708 5020 48 27 4 chrUextra 16176928 16177636 -12827020 - IDEFIX_I LTR Gypsy -1684 3944 3221 9 708 5739 25 1 3 chrUextra 16177736 16178444 -12826212 + R1_DM LINE R1 3174 3880 -1476 9 708 5783 21 1 1 chrUextra 16178544 16179252 -12825404 - R1_DM LINE R1 -1100 4256 3549 9 708 376 22 0 0 chrUextra 16179352 16179397 -12825259 - NTS_DM Other Other -195 45 1 9 708 1825 8 17 13 chrUextra 16179397 16179636 -12825020 - NTS_DM Other Other 0 240 1 9 708 1716 25 17 17 chrUextra 16179636 16179876 -12824780 - NTS_DM Other Other 0 240 1 9 708 1204 22 22 22 chrUextra 16179876 16180060 -12824596 - NTS_DM Other Other 0 240 57 9 708 5448 45 7 3 chrUextra 16180160 16180868 -12823788 + R1_DM LINE R1 1018 1728 -3628 9 708 3745 65 4 4 chrUextra 16180968 16181476 -12823180 - R1_DM LINE R1 -4848 508 1 9 708 954 26 0 0 chrUextra 16181509 16181623 -12823033 - R1_DM LINE R1 0 5356 5243 9 708 476 0 0 0 chrUextra 16181620 16181676 -12822980 - R1_DM LINE R1 -290 5066 5011 9 708 1798 83 14 0 chrUextra 16182070 16182484 -12822172 + G5_DM LINE Jockey 3972 4564 -292 9 708 2334 83 1 42 chrUextra 16182591 16183282 -12821374 + DMSAT6 Satellite Satellite 1 662 -3 9 708 7788 224 39 56 chrUextra 16183392 16185455 -12819201 - R1_DM LINE R1 -3328 2028 1 9 708 2275 4 0 0 chrUextra 16185455 16185716 -12818940 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2372 9 708 5816 11 1 0 chrUextra 16185816 16186524 -12818132 - BLOOD_I LTR Gypsy -2922 3691 2983 9 708 1004 103 6 17 chrUextra 16186630 16186807 -12817849 + SAR_DM Satellite Satellite 729 903 -569 9 708 2323 176 6 10 chrUextra 16186822 16187332 -12817324 + SAR_DM Satellite Satellite 496 1003 -469 9 708 1798 177 6 79 chrUextra 16187452 16188059 -12816597 - SAR_DM Satellite Satellite -796 562 1 9 708 603 26 0 0 chrUextra 16188064 16188140 -12816516 + ARS406_DM Unknown Unknown 90 165 -188 9 708 1516 265 57 38 chrUextra 16188241 16188948 -12815708 - ROVER-I_DM LTR Gypsy -4449 2135 1416 9 708 3072 167 10 13 chrUextra 16189056 16189736 -12814920 + SAR_DM Satellite Satellite 399 1076 -396 9 708 2324 102 25 8 chrUextra 16189857 16190564 -12814092 - DMSAT6 Satellite Satellite -73 719 1 9 708 1252 18 0 6 chrUextra 16190692 16190857 -12813799 + NTS_DM Other Other 38 201 -39 9 708 22 35 0 0 chrUextra 16190857 16190886 -12813770 + AT_rich Low_complexity Low_complexity 1 29 0 9 708 378 35 0 17 chrUextra 16190901 16190959 -12813697 + NTS_DM Other Other 145 201 -39 9 708 870 9 0 27 chrUextra 16191011 16191123 -12813533 + NTS_DM Other Other 25 133 -107 9 708 1252 18 0 6 chrUextra 16191123 16191288 -12813368 + NTS_DM Other Other 38 201 -39 9 708 21 57 0 0 chrUextra 16191288 16191323 -12813333 + AT_rich Low_complexity Low_complexity 1 35 0 9 708 5787 3 18 0 chrUextra 16191474 16191551 -12813105 + QUASIMODO_I LTR Gypsy 256 333 -5727 9 708 183 42 0 0 chrUextra 16191551 16191575 -12813081 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 9 708 5787 3 18 0 chrUextra 16191575 16192180 -12812476 + QUASIMODO_I LTR Gypsy 334 948 -5112 9 708 5768 16 1 0 chrUextra 16192280 16192988 -12811668 + STALKER4_I LTR Gypsy 2387 3095 -3435 9 708 5691 23 0 0 chrUextra 16193096 16193796 -12810860 + MDG1_I LTR Gypsy 2625 3324 -3272 9 708 3034 178 19 8 chrUextra 16193899 16194603 -12810053 - SAR_DM Satellite Satellite -416 1056 346 9 708 2882 59 0 2 chrUextra 16194704 16195111 -12809545 - BATUMI_I LTR Pao -255 7708 7303 9 708 2042 43 11 7 chrUextra 16195134 16195412 -12809244 + BATUMI_I LTR Pao 6427 6705 -1258 9 708 34 24 0 0 chrUextra 16195512 16195553 -12809103 + AT_rich Low_complexity Low_complexity 1 41 0 9 708 21 95 0 0 chrUextra 16195766 16195829 -12808827 + AT_rich Low_complexity Low_complexity 1 63 0 9 708 2867 0 0 69 chrUextra 16195841 16196220 -12808436 + LSU-rRNA_Dme rRNA rRNA 1 353 -3547 9 708 3151 175 6 16 chrUextra 16196320 16197028 -12807628 + SAR_DM Satellite Satellite 406 1106 -366 9 708 1374 0 0 0 chrUextra 16197128 16197295 -12807361 - NTS_DM Other Other -36 204 38 9 708 1142 0 0 0 chrUextra 16197295 16197428 -12807228 - NTS_DM Other Other -107 133 1 9 708 1756 17 17 17 chrUextra 16197428 16197668 -12806988 - NTS_DM Other Other 0 240 1 9 708 1084 24 24 24 chrUextra 16197668 16197836 -12806820 - NTS_DM Other Other 0 240 73 9 708 5706 19 0 17 chrUextra 16197936 16198644 -12806012 - CIRCE LINE Composite -2225 4131 3436 9 708 2934 187 9 7 chrUextra 16198744 16199433 -12805223 - SAR_DM Satellite Satellite -588 884 195 9 708 627 117 9 0 chrUextra 16199340 16199451 -12805205 + ARS406_DM Unknown Unknown 1 112 -241 9 708 6117 1 0 0 chrUextra 16200358 16201065 -12803591 + DMRT1A LINE R1 1512 2218 -2965 9 708 4154 8 4 0 chrUextra 16201165 16201654 -12803002 - R1_DM LINE R1 -4865 491 1 9 708 1470 0 225 0 chrUextra 16201654 16201872 -12802784 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2366 9 708 1959 168 43 24 chrUextra 16201974 16202677 -12801979 + SAR_DM Satellite Satellite 1 716 -416 9 708 4950 3 0 0 chrUextra 16202779 16203348 -12801308 + LSU-rRNA_Dme rRNA rRNA 2084 2652 -1248 9 708 1223 7 0 0 chrUextra 16203343 16203486 -12801170 + R1_DM LINE R1 4353 4495 -861 9 708 1719 158 35 3 chrUextra 16203586 16204273 -12800383 + SAR_DM Satellite Satellite 1 709 -749 9 708 848 332 20 21 chrUextra 16204433 16205031 -12799625 + MICROPIA_I LTR Gypsy 118 710 -3389 9 708 2878 183 17 11 chrUextra 16205200 16205906 -12798750 + SAR_DM Satellite Satellite 263 972 -500 9 708 2295 37 3 0 chrUextra 16206816 16207115 -12797541 - QUASIMODO_I LTR Gypsy -3940 2120 1821 9 708 2760 52 2 13 chrUextra 16207124 16207517 -12797139 - QUASIMODO_I LTR Gypsy -4450 1610 1222 9 708 3962 7 2 0 chrUextra 16207621 16208081 -12796575 + QUASIMODO_LTR LTR Gypsy 198 658 0 9 708 2045 8 0 8 chrUextra 16208081 16208328 -12796328 + QUASIMODO_I LTR Gypsy 1 245 -5815 9 708 5848 4 1 0 chrUextra 16208428 16209135 -12795521 + STALKER4_I LTR Gypsy 2860 3567 -2963 9 708 2911 185 7 7 chrUextra 16209238 16209919 -12794737 + SAR_DM Satellite Satellite 230 910 -562 9 708 300 94 19 0 chrUextra 16209889 16209942 -12794714 - ARS406_DM Unknown Unknown -278 75 22 9 708 34 24 0 0 chrUextra 16210147 16210188 -12794468 + AT_rich Low_complexity Low_complexity 1 41 0 9 708 6036 3 1 0 chrUextra 16210849 16211556 -12793100 + ROO_I LTR Pao 4956 5663 -2593 9 708 5143 60 0 0 chrUextra 16211658 16212363 -12792293 - IDEFIX_I LTR Gypsy -1240 4388 3684 9 708 30 27 0 0 chrUextra 16212474 16212511 -12792145 + AT_rich Low_complexity Low_complexity 1 37 0 9 708 1486 112 8 4 chrUextra 16212763 16213006 -12791650 + BS2 LINE Jockey 14 257 -4464 9 708 1032 55 18 12 chrUextra 16213005 16213170 -12791486 - G5_DM LINE Jockey 0 4856 4691 9 708 1127 0 0 0 chrUextra 16213270 16213399 -12791257 + Copia_I LTR Copia 4465 4593 0 9 708 2219 4 4 4 chrUextra 16213399 16213675 -12790981 + Copia_LTR LTR Copia 1 276 0 9 708 1663 18 13 18 chrUextra 16213675 16213900 -12790756 - NTS_DM Other Other -16 224 1 9 708 504 0 52 39 chrUextra 16213900 16213977 -12790679 - NTS_DM Other Other 0 240 163 9 708 5790 14 1 0 chrUextra 16214077 16214784 -12789872 + STALKER4_I LTR Gypsy 2391 3098 -3432 9 708 6107 4 3 0 chrUextra 16214884 16215591 -12789065 + SSU-rRNA_Dme rRNA rRNA 31 739 -1256 9 708 2589 193 8 21 chrUextra 16215691 16216358 -12788298 + SAR_DM Satellite Satellite 462 1119 -353 9 708 340 222 9 18 chrUextra 16216272 16216382 -12788274 - XDMR_DM Unknown Unknown 0 360 252 9 708 5773 18 0 0 chrUextra 16216498 16217205 -12787451 + QUASIMODO_I LTR Gypsy 2326 3032 -3028 9 708 488 15 0 0 chrUextra 16217305 16217370 -12787286 + NTS_DM Other Other 69 133 -107 9 708 1252 18 0 6 chrUextra 16217370 16217535 -12787121 + NTS_DM Other Other 38 201 -39 9 708 870 9 0 27 chrUextra 16217587 16217699 -12786957 + NTS_DM Other Other 25 133 -107 9 708 1252 18 0 6 chrUextra 16217699 16217864 -12786792 + NTS_DM Other Other 38 201 -39 9 708 727 11 0 32 chrUextra 16217916 16218010 -12786646 + NTS_DM Other Other 25 115 -125 9 708 2956 183 9 9 chrUextra 16218118 16218817 -12785839 - SAR_DM Satellite Satellite -396 1076 378 9 708 4086 52 37 0 chrUextra 16218919 16219462 -12785194 + TART_B1 LINE telomeric 2963 3525 -7129 9 708 1218 77 18 0 chrUextra 16219456 16219626 -12785030 + TART_B1 LINE telomeric 4319 4491 -6163 9 708 6152 1 1 1 chrUextra 16219726 16220433 -12784223 - NOMAD_I LTR Gypsy -2672 3900 3194 9 708 2409 82 10 28 chrUextra 16220533 16221240 -12783416 - DMSAT6 Satellite Satellite -72 693 1 9 708 779 72 24 8 chrUextra 16221821 16221947 -12782709 - STALKER4_I LTR Gypsy -5645 885 758 9 708 5315 36 4 11 chrUextra 16222155 16222854 -12781802 + BATUMI_I LTR Pao 1395 2088 -5875 9 708 2273 3 3 3 chrUextra 16222954 16223238 -12781418 + DM176_I LTR Gypsy 6137 6420 0 9 708 2794 23 15 67 chrUextra 16223238 16223654 -12781002 + DM176_LTR LTR Gypsy 1 360 -147 9 708 3088 170 10 11 chrUextra 16223761 16224464 -12780192 - SAR_DM Satellite Satellite -504 968 267 9 708 5901 3 0 0 chrUextra 16224596 16225275 -12779381 + LSU-rRNA_Dme rRNA rRNA 1788 2466 -1434 9 708 1910 37 4 0 chrUextra 16225375 16225616 -12779040 + PROTOP_B DNA P 869 1110 -43 9 708 977 147 182 4 chrUextra 16225613 16225838 -12778818 - DMCR1A LINE CR1 -1125 3345 3081 9 708 748 160 140 6 chrUextra 16225925 16226082 -12778574 + DMLTR5 LTR Gypsy 40 217 -49 9 708 2440 74 112 0 chrUextra 16226192 16226585 -12778071 + TART LINE telomeric 7403 7839 -6638 9 708 1546 109 224 0 chrUextra 16226585 16226889 -12777767 + TAHRE LINE telomeric 10013 10384 -79 9 708 6016 3 0 0 chrUextra 16226989 16227696 -12776960 + DM176_I LTR Gypsy 655 1361 -5059 9 708 6033 4 1 0 chrUextra 16227796 16228503 -12776153 + FW_DM LINE Jockey 973 1680 -3012 9 708 2777 200 23 8 chrUextra 16228604 16229310 -12775346 - SAR_DM Satellite Satellite -498 974 259 9 708 801 114 23 0 chrUextra 16229410 16229542 -12775114 + DNAREP1_DM LINE Penelope 31 165 -429 9 708 805 171 67 16 chrUextra 16229598 16229813 -12774843 + DNAREP1_DM LINE Penelope 117 332 -262 9 708 298 172 203 79 chrUextra 16229797 16229974 -12774682 - DNAREP1_DM LINE Penelope -380 214 16 9 708 3037 0 3 0 chrUextra 16230577 16230924 -12773732 - SSU-rRNA_Dme rRNA rRNA 0 1995 1648 9 708 3167 168 16 8 chrUextra 16231025 16231728 -12772928 + SAR_DM Satellite Satellite 287 994 -478 9 708 467 144 49 35 chrUextra 16232638 16232782 -12771874 + NTS_DM Other Other 95 240 0 9 708 285 104 21 0 chrUextra 16232782 16232830 -12771826 + NTS_DM Other Other 1 49 -191 9 708 1054 150 29 21 chrUextra 16232912 16233150 -12771506 + NTS_DM Other Other 1 240 0 9 708 285 104 21 0 chrUextra 16233150 16233198 -12771458 + NTS_DM Other Other 1 49 -191 9 708 328 203 0 0 chrUextra 16233281 16233345 -12771311 + NTS_DM Other Other 1 64 -176 9 708 6237 0 0 0 chrUextra 16233445 16234152 -12770504 - NOMAD_I LTR Gypsy -4540 2032 1326 9 708 3495 7 0 0 chrUextra 16234252 16234676 -12769980 + DOC LINE Jockey 4302 4725 0 9 708 5840 1 13 0 chrUextra 16235061 16235766 -12768890 + ROO_I LTR Pao 53 766 -7490 9 708 5056 22 3 0 chrUextra 16235866 16236492 -12768164 - PROTOP_A DNA P -477 628 1 9 708 602 85 0 0 chrUextra 16236492 16236573 -12768083 - STALKER4_I LTR Gypsy -6262 268 188 9 708 1666 0 0 0 chrUextra 16236673 16236862 -12767794 - LSU-rRNA_Dme rRNA rRNA -1924 1976 1788 9 708 3974 2 4 4 chrUextra 16236906 16237380 -12767276 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1315 9 708 5616 41 4 0 chrUextra 16237481 16238187 -12766469 + G5A_DM LINE Jockey 1963 2671 -170 9 708 2991 190 9 4 chrUextra 16238287 16238981 -12765675 - SAR_DM Satellite Satellite -552 920 224 9 708 470 93 0 0 chrUextra 16238919 16238994 -12765662 + ARS406_DM Unknown Unknown 1 75 -278 9 708 4797 21 103 0 chrUextra 16239094 16239801 -12764855 - FW_DM LINE Jockey -90 4602 3823 9 708 741 12 0 0 chrUextra 16239904 16239990 -12764666 + NOMAD_LTR LTR Gypsy 433 518 0 9 708 5371 0 5 0 chrUextra 16239990 16240608 -12764048 + NOMAD_I LTR Gypsy 1 621 -5951 9 708 2180 32 54 0 chrUextra 16240708 16240986 -12763670 - PROTOP DNA P -4187 293 1 9 708 5236 7 0 0 chrUextra 16241515 16242123 -12762533 - DM1731_I LTR Copia -3368 608 1 9 708 829 20 0 0 chrUextra 16242123 16242222 -12762434 - DM1731_LTR LTR Copia 0 336 238 9 708 5740 27 1 4 chrUextra 16242322 16243029 -12761627 + MAX_I LTR Pao 1994 2698 -5216 9 708 5995 173 3 15 chrUextra 16243130 16244643 -12760013 - IDEFIX_I LTR Gypsy -3165 3847 1209 9 708 6057 4 0 6 chrUextra 16244743 16245450 -12759206 - MICROPIA_I LTR Gypsy -1085 3391 2689 9 708 2775 188 35 10 chrUextra 16246365 16247064 -12757592 - SAR_DM Satellite Satellite -1072 715 1 9 708 23 0 0 0 chrUextra 16247746 16247769 -12756887 + AT_rich Low_complexity Low_complexity 1 23 0 9 708 3742 2 2 0 chrUextra 16247971 16248402 -12756254 + LSU-rRNA_Dme rRNA rRNA 3469 3900 0 9 708 22 56 0 0 chrUextra 16248474 16248510 -12756146 + AT_rich Low_complexity Low_complexity 1 36 0 9 708 246 150 0 0 chrUextra 16248515 16248555 -12756101 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 708 246 150 0 0 chrUextra 16248607 16248647 -12756009 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 708 6035 3 1 0 chrUextra 16248778 16249485 -12755171 - Invader3_I LTR Gypsy -1139 3749 3042 9 708 2752 184 24 32 chrUextra 16249589 16250292 -12754364 - SAR_DM Satellite Satellite -1051 697 1 9 708 1555 16 5 10 chrUextra 16250392 16250587 -12754069 - Gypsy_LTR LTR Gypsy -288 194 1 9 708 485 266 16 16 chrUextra 16250587 16250773 -12753883 + Copia_I LTR Copia 3735 3920 -673 9 708 403 88 179 8 chrUextra 16250942 16251070 -12753586 - TART LINE telomeric -3998 10479 10370 9 708 2667 203 16 22 chrUextra 16251204 16251906 -12752750 + SAR_DM Satellite Satellite 1 698 -208 9 708 1211 298 48 13 chrUextra 16252175 16252713 -12751943 - Invader1_I LTR Gypsy -919 2267 1711 9 708 740 30 0 0 chrUextra 16252813 16252913 -12751743 + Invader1_I LTR Gypsy 2980 3079 -107 9 88 460 0 0 0 chrUextra 16252925 16252979 -12751677 + Invader1_I LTR Gypsy 3133 3186 0 9 709 3591 12 2 0 chrUextra 16252979 16253401 -12751255 + Invader1_LTR LTR Gypsy 1 423 0 9 709 6058 1 0 0 chrUextra 16253620 16254327 -12750329 + ROO_I LTR Pao 5335 6041 -2215 9 709 22 56 0 0 chrUextra 16255617 16255653 -12749003 + AT_rich Low_complexity Low_complexity 1 36 0 9 709 6025 4 0 0 chrUextra 16256041 16256741 -12747915 - Invader3_I LTR Gypsy -4188 700 1 9 709 781 21 0 0 chrUextra 16256848 16256943 -12747713 + TRANSPAC_I LTR Gypsy 4496 4590 0 9 709 2839 9 0 0 chrUextra 16256942 16257272 -12747384 + TRANSPAC_LTR LTR Gypsy 1 330 0 9 709 2343 3 3 7 chrUextra 16257272 16257555 -12747101 + LSU-rRNA_Dme rRNA rRNA 1157 1438 -2462 9 709 3525 184 4 1 chrUextra 16257656 16258359 -12746297 - ROVER-I_DM LTR Gypsy -2687 3897 3193 9 709 5702 37 0 0 chrUextra 16259269 16259976 -12744680 + MDG1_I LTR Gypsy 3713 4419 -2177 9 709 5792 18 23 0 chrUextra 16260076 16260783 -12743873 - R1_DM LINE R1 -1541 3815 3093 9 709 3437 99 0 9 chrUextra 16260883 16261424 -12743232 - R1_DM LINE R1 -4247 1109 574 9 709 906 107 30 30 chrUextra 16261425 16261589 -12743067 - R1_DM LINE R1 -5184 172 9 9 709 298 0 0 0 chrUextra 16262596 16262632 -12742024 + MAX_I LTR Pao 920 955 -6959 9 709 1203 108 154 102 chrUextra 16262664 16263066 -12741590 + MAX_I LTR Pao 932 1354 -6560 9 709 5883 3 3 1 chrUextra 16263304 16264011 -12740645 + R1_DM LINE R1 668 1375 -3981 9 709 2582 180 7 8 chrUextra 16264116 16264816 -12739840 - SAR_DM Satellite Satellite -749 699 1 9 709 3422 0 2 60 chrUextra 16264918 16265370 -12739286 - LSU-rRNA_Dme rRNA rRNA -3474 426 1 9 709 21 95 0 0 chrUextra 16265382 16265445 -12739211 + AT_rich Low_complexity Low_complexity 1 63 0 9 709 6016 0 0 1 chrUextra 16265725 16266432 -12738224 + LSU-rRNA_Dme rRNA rRNA 475 1180 -2720 9 709 51 31 0 0 chrUextra 16266588 16266653 -12738003 + AT_rich Low_complexity Low_complexity 1 65 0 9 709 22 35 0 0 chrUextra 16266828 16266857 -12737799 + AT_rich Low_complexity Low_complexity 1 29 0 9 709 220 141 46 15 chrUextra 16267144 16267209 -12737447 + (TAA)n Simple_repeat Simple_repeat 2 68 0 9 709 5775 16 13 0 chrUextra 16267339 16268046 -12736610 + DOC2_DM LINE Jockey 2884 3599 -1194 9 709 729 44 0 0 chrUextra 16268146 16268236 -12736420 - FB4_DM DNA Tc1 -3999 90 1 9 709 2192 166 88 7 chrUextra 16268236 16268690 -12735966 + FW_DM LINE Jockey 1026 1516 -3176 9 709 607 111 10 0 chrUextra 16268739 16268838 -12735818 + DM297_LTR LTR Gypsy 1 100 -314 9 709 3109 0 6 0 chrUextra 16268953 16269317 -12735339 - DM1731_I LTR Copia -3610 366 1 9 709 2667 39 0 0 chrUextra 16269317 16269653 -12735003 - DM1731_LTR LTR Copia 0 336 1 9 709 888 87 3 15 chrUextra 16269760 16270417 -12734239 + RSP Satellite Satellite 1 649 0 9 709 2966 191 4 7 chrUextra 16270567 16271265 -12733391 + SAR_DM Satellite Satellite 208 903 -569 9 709 3026 172 13 21 chrUextra 16271374 16272081 -12732575 + SAR_DM Satellite Satellite 399 1099 -373 9 709 329 217 189 0 chrUextra 16272181 16272287 -12732369 + LINEJ1_DM LINE Jockey 4682 4807 -213 9 709 812 94 0 0 chrUextra 16272988 16273115 -12731541 - ARS406_DM Unknown Unknown -226 127 1 9 709 2981 161 7 19 chrUextra 16273019 16273695 -12730961 + SAR_DM Satellite Satellite 192 859 -613 9 709 5961 18 0 0 chrUextra 16273795 16274502 -12730154 - Gypsy4_I LTR Gypsy -2215 4073 3367 9 709 5440 26 0 1 chrUextra 16274602 16275288 -12729368 + MDG1_I LTR Gypsy 5421 6105 -491 9 709 21 0 0 0 chrUextra 16275288 16275309 -12729347 + AT_rich Low_complexity Low_complexity 1 21 0 9 709 322 178 50 101 chrUextra 16275442 16275561 -12729095 - Copia_I LTR Copia -80 4513 4401 9 709 186 43 0 0 chrUextra 16275619 16275642 -12729014 + (TTTAA)n Simple_repeat Simple_repeat 5 27 0 9 709 1342 207 47 6 chrUextra 16275795 16276116 -12728540 + HETA LINE telomeric 4020 4353 -1728 9 709 2405 48 6 0 chrUextra 16276234 16276549 -12728107 + PROTOP DNA P 4164 4480 0 9 709 195 139 0 0 chrUextra 16277203 16277239 -12727417 + (GA)n Simple_repeat Simple_repeat 2 37 0 9 709 186 71 0 0 chrUextra 16277663 16277691 -12726965 + (TTGG)n Simple_repeat Simple_repeat 4 31 0 9 709 5654 20 10 1 chrUextra 16277830 16278537 -12726119 + R1_DM LINE R1 3188 3900 -1456 9 709 5596 0 1 3 chrUextra 16278637 16279344 -12725312 - DM412 LTR Gypsy -5165 1732 1027 9 709 2489 184 7 9 chrUextra 16279455 16280037 -12724619 - SAR_DM Satellite Satellite -396 1076 496 9 709 796 30 0 0 chrUextra 16280042 16280142 -12724514 + ARS406_DM Unknown Unknown 90 189 -164 9 709 294 0 21 0 chrUextra 16280253 16280300 -12724356 + TABOR_I LTR Gypsy 1325 1372 -4964 9 709 5836 0 1 0 chrUextra 16280285 16280958 -12723698 + TABOR_I LTR Gypsy 3258 3931 -2405 9 709 5979 8 0 0 chrUextra 16281058 16281765 -12722891 - R1_DM LINE R1 -1939 3417 2711 9 709 2003 0 0 0 chrUextra 16281865 16282098 -12722558 - DOC LINE Jockey -1387 3338 3106 9 709 2784 37 20 0 chrUextra 16282672 16283025 -12721631 - FW_DM LINE Jockey -4332 360 1 9 709 2762 40 0 0 chrUextra 16283033 16283379 -12721277 + R1_DM LINE R1 1377 1722 -3634 9 709 5451 0 1 0 chrUextra 16284286 16284946 -12719710 + ROO_I LTR Pao 7596 8256 0 9 709 402 0 0 0 chrUextra 16284946 16284993 -12719663 + ROO_LTR LTR Pao 1 47 -381 9 709 1036 67 0 0 chrUextra 16285096 16285245 -12719411 + TAHRE LINE telomeric 10303 10451 -12 9 709 1920 185 79 44 chrUextra 16285244 16285786 -12718870 + TAHRE LINE telomeric 7044 7604 -2859 9 709 4768 33 0 2 chrUextra 16285900 16286506 -12718150 + NINJA_I LTR Pao 5407 6011 0 9 709 674 21 0 69 chrUextra 16286506 16286607 -12718049 + NINJA_LTR LTR Pao 1 94 -223 9 709 5670 0 1 0 chrUextra 16286707 16287353 -12717303 + LSU-rRNA_Dme rRNA rRNA 3254 3900 0 9 709 5042 7 0 0 chrUextra 16287514 16288117 -12716539 - DM176_I LTR Gypsy -617 5803 5201 9 709 791 10 0 0 chrUextra 16288113 16288217 -12716439 - DM176_I LTR Gypsy -5167 1253 1150 9 709 3142 0 0 0 chrUextra 16288321 16288677 -12715979 + ROO_LTR LTR Pao 73 428 0 9 709 318 71 0 0 chrUextra 16288967 16289009 -12715647 + DNAREP1_DM LINE Penelope 1 42 -552 9 709 5408 51 1 0 chrUextra 16289935 16290642 -12714014 - IDEFIX_I LTR Gypsy -2768 2860 2153 9 709 3101 173 16 6 chrUextra 16290742 16291435 -12713221 - SAR_DM Satellite Satellite -447 1025 326 9 709 6035 10 3 0 chrUextra 16291549 16292256 -12712400 - Copia2_I LTR Copia -1750 2412 1704 9 709 34 24 0 0 chrUextra 16292712 16292753 -12711903 + AT_rich Low_complexity Low_complexity 1 41 0 9 709 21 95 0 0 chrUextra 16292966 16293029 -12711627 + AT_rich Low_complexity Low_complexity 1 63 0 9 709 725 332 39 23 chrUextra 16293203 16293773 -12710883 - MICROPIA_I LTR Gypsy -2991 1485 907 9 709 6035 1 1 4 chrUextra 16293970 16294677 -12709979 + LSU-rRNA_Dme rRNA rRNA 825 1529 -2371 9 709 480 121 36 0 chrUextra 16294777 16294860 -12709796 - NTS_DM Other Other -151 89 4 9 709 1301 6 0 18 chrUextra 16294972 16295137 -12709519 - NTS_DM Other Other -78 162 1 9 709 1836 4 12 17 chrUextra 16295137 16295378 -12709278 - NTS_DM Other Other 0 240 1 9 709 688 10 38 28 chrUextra 16295378 16295484 -12709172 - NTS_DM Other Other 0 240 134 9 709 2326 187 58 19 chrUextra 16295588 16296288 -12708368 + SAR_DM Satellite Satellite 1 727 -208 9 709 811 126 0 53 chrUextra 16296460 16296611 -12708045 - DM176_I LTR Gypsy 0 6420 6278 9 709 1019 146 0 5 chrUextra 16296610 16296803 -12707853 - DM297_I LTR Gypsy -486 5681 5490 9 709 1202 190 3 7 chrUextra 16296801 16297098 -12707558 - DM297_I LTR Gypsy -1433 4734 4439 9 709 5644 31 0 0 chrUextra 16297203 16297905 -12706751 - R1_DM LINE R1 -2043 3313 2612 9 709 3114 116 137 3 chrUextra 16298005 16298712 -12705944 - BATUMI_I LTR Pao -3304 4610 3733 9 709 5721 30 0 0 chrUextra 16298812 16299519 -12705137 + R1_DM LINE R1 2840 3546 -1810 9 709 2327 98 7 32 chrUextra 16299619 16300326 -12704330 - DMSAT6 Satellite Satellite -135 689 1 9 709 2991 184 10 8 chrUextra 16300431 16301133 -12703523 - SAR_DM Satellite Satellite -514 958 256 9 709 3509 203 24 35 chrUextra 16301233 16302746 -12701910 + SAR_DM Satellite Satellite 1 1495 -208 9 709 5984 6 0 1 chrUextra 16302847 16303554 -12701102 - DM176_I LTR Gypsy -5129 1291 586 9 709 1462 0 6 0 chrUextra 16303654 16303824 -12700832 + LSU-rRNA_Dme rRNA rRNA 2354 2524 -1376 9 709 4724 2 0 0 chrUextra 16303823 16304361 -12700295 + R2_DM LINE R2 1260 1797 -1810 9 709 3173 258 26 28 chrUextra 16304461 16305971 -12698685 + SAR_DM Satellite Satellite 1 1507 -354 9 709 246 150 0 0 chrUextra 16306129 16306169 -12698487 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 709 22 56 0 0 chrUextra 16306174 16306210 -12698446 + AT_rich Low_complexity Low_complexity 1 36 0 9 709 4336 0 2 2 chrUextra 16306282 16306782 -12697874 - LSU-rRNA_Dme rRNA rRNA 0 3900 3401 9 709 5702 8 55 1 chrUextra 16306884 16307589 -12697067 - DOC LINE Jockey -24 4701 3959 9 709 5792 21 1 3 chrUextra 16307689 16308396 -12696260 + R1_DM LINE R1 3153 3858 -1498 9 709 1288 0 27 16 chrUextra 16309303 16309486 -12695170 + NTS_DM Other Other 56 240 0 9 709 1843 4 17 13 chrUextra 16309486 16309725 -12694931 + NTS_DM Other Other 1 240 0 9 709 1847 4 17 13 chrUextra 16309725 16309964 -12694692 + NTS_DM Other Other 1 240 0 9 709 400 0 0 0 chrUextra 16309964 16310010 -12694646 + NTS_DM Other Other 1 46 -194 9 709 2596 78 0 0 chrUextra 16310119 16310480 -12694176 + BEL_LTR LTR Pao 1 361 0 9 709 1078 75 0 0 chrUextra 16310485 16310627 -12694029 + BEL_I LTR Pao 2 143 -5261 9 709 1674 0 0 0 chrUextra 16310627 16310817 -12693839 - ROO_LTR LTR Pao 0 428 239 9 709 511 191 0 22 chrUextra 16310919 16311058 -12693598 - ARS406_DM Unknown Unknown -217 136 1 9 709 2756 182 20 11 chrUextra 16310969 16311624 -12693032 + SAR_DM Satellite Satellite 201 861 -611 9 709 2781 200 14 9 chrUextra 16311725 16312425 -12692231 - SAR_DM Satellite Satellite -543 929 226 9 709 701 142 0 0 chrUextra 16312531 16312651 -12692005 - DM297_I LTR Gypsy -3505 2662 2543 9 709 1751 137 31 9 chrUextra 16312659 16312976 -12691680 - DMRT1C LINE R1 -154 5289 4966 9 709 630 99 0 0 chrUextra 16312974 16313065 -12691591 - DMRT1C LINE R1 -701 4742 4652 9 709 1310 0 0 0 chrUextra 16313078 16313236 -12691420 + ACCORD2_I LTR Gypsy 47 204 -7008 9 709 5690 13 1 0 chrUextra 16313338 16314045 -12690611 + DM176_I LTR Gypsy 1160 1867 -4553 9 709 847 172 15 5 chrUextra 16314147 16314541 -12690115 - ROVER-I_DM LTR Gypsy -156 6428 5992 9 709 1426 145 7 0 chrUextra 16314578 16314847 -12689809 - ROVER-I_DM LTR Gypsy -1276 5308 5038 9 709 1930 0 0 0 chrUextra 16314975 16315197 -12689459 - LSU-rRNA_Dme rRNA rRNA -3678 222 1 9 709 34 24 0 0 chrUextra 16315485 16315526 -12689130 + AT_rich Low_complexity Low_complexity 1 41 0 9 709 2908 179 12 10 chrUextra 16315779 16316466 -12688190 + SAR_DM Satellite Satellite 326 1013 -459 9 709 6102 0 0 0 chrUextra 16316566 16317273 -12687383 + ROO_I LTR Pao 1376 2082 -6174 9 709 1491 36 0 0 chrUextra 16317629 16317850 -12686806 + (TCTTG)n Simple_repeat Simple_repeat 1 221 0 9 709 3131 168 14 8 chrUextra 16318180 16318883 -12685773 - SAR_DM Satellite Satellite -445 1027 321 9 709 6156 1 0 0 chrUextra 16318987 16319694 -12684962 + FW_DM LINE Jockey 3246 3952 -740 9 709 1364 0 0 6 chrUextra 16319794 16319955 -12684701 + HOBO DNA hAT 2857 3016 0 9 709 4580 4 0 0 chrUextra 16319955 16320501 -12684155 - ROO_I LTR Pao -1184 7072 6527 9 709 403 74 49 0 chrUextra 16320601 16320682 -12683974 - PROTOP DNA P -3748 732 648 9 709 4321 25 2 0 chrUextra 16320689 16321220 -12683436 - PROTOP DNA P -3949 531 1 9 709 492 123 0 0 chrUextra 16321220 16321301 -12683355 - DNAREP1_DM LINE Penelope -20 574 494 9 709 6115 3 1 0 chrUextra 16321408 16322115 -12682541 + FW_DM LINE Jockey 3414 4121 -571 9 709 6109 6 0 1 chrUextra 16322215 16322922 -12681734 - SSU-rRNA_Dme rRNA rRNA -1216 779 74 9 709 5891 6 1 4 chrUextra 16323841 16324536 -12680120 - SSU-rRNA_Dme rRNA rRNA -254 1741 1049 9 709 5601 0 0 37 chrUextra 16324636 16325343 -12679313 - LSU-rRNA_Dme rRNA rRNA -3072 828 148 9 709 2718 183 8 23 chrUextra 16325444 16326150 -12678506 + SAR_DM Satellite Satellite 1 695 -354 9 709 5480 10 6 16 chrUextra 16326250 16326957 -12677699 - PROTOP_A DNA P -243 862 163 9 709 2987 181 7 7 chrUextra 16327057 16327741 -12676915 - SAR_DM Satellite Satellite -594 878 195 9 709 693 112 0 0 chrUextra 16327648 16327764 -12676892 + ARS406_DM Unknown Unknown 1 116 -237 9 709 3136 173 10 10 chrUextra 16327864 16328570 -12676086 + SAR_DM Satellite Satellite 342 1047 -425 9 709 21 89 0 0 chrUextra 16328901 16328957 -12675699 + AT_rich Low_complexity Low_complexity 1 56 0 9 709 3497 2 2 0 chrUextra 16328976 16329378 -12675278 - SSU-rRNA_Dme rRNA rRNA 0 1995 1593 9 709 5099 60 7 4 chrUextra 16329478 16330185 -12674471 - TRANSIB2 DNA Transib -1910 934 226 9 709 3261 161 14 13 chrUextra 16330289 16330992 -12673664 - SAR_DM Satellite Satellite -435 1037 334 9 709 2869 34 0 0 chrUextra 16331092 16331449 -12673207 - R1_DM LINE R1 -3093 2263 1907 9 709 2738 41 0 0 chrUextra 16331436 16331781 -12672875 - R1_DM LINE R1 -3695 1661 1317 9 709 288 152 0 0 chrUextra 16331906 16331965 -12672691 - BS LINE Jockey -3047 2079 2021 9 709 1193 103 0 118 chrUextra 16332126 16332380 -12672276 + DIVER_LTR LTR Pao 1 224 0 9 709 1670 20 5 5 chrUextra 16332401 16332606 -12672050 + DIVER_I LTR Pao 1 205 -5438 9 709 387 204 0 11 chrUextra 16332714 16332808 -12671848 - HETA LINE telomeric -376 5705 5613 9 709 2739 177 12 10 chrUextra 16332812 16333325 -12671331 - TAHRE LINE telomeric -19 10444 9931 9 709 4694 19 1 9 chrUextra 16333513 16334220 -12670436 - DOC LINE Jockey -1646 3079 2299 9 709 2516 16 0 93 chrUextra 16335936 16336279 -12668377 - CIRCE LINE Composite -4741 1615 1305 9 709 650 354 25 32 chrUextra 16336122 16336563 -12668093 - Gypsy12_I LTR Gypsy -2177 3369 2932 9 709 2033 59 0 88 chrUextra 16336345 16336641 -12668015 - CIRCE LINE Composite -5064 1292 1023 9 709 1853 172 7 13 chrUextra 16336742 16337444 -12667212 + SAR_DM Satellite Satellite 1 698 -558 9 709 340 26 0 0 chrUextra 16337409 16337448 -12667208 - ARS406_DM Unknown Unknown -166 187 149 9 709 1500 18 18 0 chrUextra 16337548 16337719 -12666937 + Gypsy4_I LTR Gypsy 2516 2689 -3599 9 709 4795 25 0 4 chrUextra 16337704 16338255 -12666401 + Gypsy4_I LTR Gypsy 3200 3748 -2540 9 709 6480 1 1 3 chrUextra 16339162 16339868 -12664788 - SSU-rRNA_Dme rRNA rRNA -636 1359 655 9 709 6444 0 0 0 chrUextra 16339968 16340674 -12663982 + DM176_I LTR Gypsy 3415 4120 -2300 9 709 6494 3 0 1 chrUextra 16340774 16341480 -12663176 + R1_DM LINE R1 1686 2390 -2966 9 709 6200 8 0 0 chrUextra 16341580 16342286 -12662370 + DM176_I LTR Gypsy 1524 2229 -4191 9 709 6028 40 0 0 chrUextra 16342386 16343092 -12661564 - R1_DM LINE R1 -3476 1880 1175 9 709 1949 261 39 39 chrUextra 16343205 16343898 -12660758 + ROVER-I_DM LTR Gypsy 1338 2030 -4554 9 709 5883 31 2 1 chrUextra 16343998 16344704 -12659952 + Gypsy2_I LTR Gypsy 3459 4094 -2041 9 709 5299 39 3 2 chrUextra 16344804 16345447 -12659209 - R1_DM LINE R1 -4083 1273 630 9 709 374 78 0 0 chrUextra 16345459 16345510 -12659146 - R1_DM LINE R1 -5288 68 18 9 709 6040 6 8 1 chrUextra 16345610 16346316 -12658340 + QUASIMODO_I LTR Gypsy 4255 4965 -1095 9 709 6477 1 3 0 chrUextra 16346416 16347122 -12657534 - R1_DM LINE R1 -3193 2163 1456 9 709 3446 18 9 11 chrUextra 16347222 16347664 -12656992 + STALKER4_I LTR Gypsy 6090 6530 0 9 709 2412 8 0 0 chrUextra 16347664 16347928 -12656728 + STALKER4_LTR LTR Gypsy 1 264 -138 9 709 4594 37 0 18 chrUextra 16348028 16348582 -12656074 + BATUMI_I LTR Pao 4657 5200 -2763 9 709 957 90 18 0 chrUextra 16348584 16348731 -12655925 + BATUMI_I LTR Pao 6302 6420 -1543 9 709 2242 30 57 0 chrUextra 16348834 16349097 -12655559 - PROTOP DNA P -4202 278 1 9 709 246 0 0 32 chrUextra 16349640 16349671 -12654985 - NTS_DM Other Other -173 67 38 9 709 928 9 0 27 chrUextra 16349671 16349783 -12654873 - NTS_DM Other Other -107 133 25 9 709 1332 18 0 6 chrUextra 16349835 16350000 -12654656 - NTS_DM Other Other -39 201 38 9 709 928 9 0 27 chrUextra 16350000 16350112 -12654544 - NTS_DM Other Other -107 133 25 9 709 1321 24 0 6 chrUextra 16350164 16350329 -12654327 - NTS_DM Other Other -39 201 38 9 709 1678 54 8 29 chrUextra 16350449 16350695 -12653961 - HETRP_DM Satellite Satellite -1619 253 13 9 709 2287 63 43 35 chrUextra 16350807 16351152 -12653504 - HETRP_DM Satellite Satellite -916 956 609 9 709 3277 169 20 14 chrUextra 16352058 16352764 -12651892 + SAR_DM Satellite Satellite 180 889 -583 9 709 937 45 0 0 chrUextra 16352864 16352975 -12651681 - PROTOP_B DNA P -969 184 74 9 709 3354 170 10 11 chrUextra 16353675 16354376 -12650280 - SAR_DM Satellite Satellite -514 958 259 9 709 418 20 20 0 chrUextra 16354476 16354527 -12650129 - Copia2_I LTR Copia -585 3577 3526 9 709 1565 0 0 0 chrUextra 16354881 16355051 -12649605 - Copia2_LTR_DM LTR Copia 0 198 29 9 709 1214 0 0 0 chrUextra 16355051 16355182 -12649474 - Invader1_LTR LTR Gypsy 0 423 293 9 709 6370 0 0 1 chrUextra 16356088 16356794 -12647862 + ROO_I LTR Pao 4156 4860 -3396 9 709 3179 58 105 0 chrUextra 16356903 16357332 -12647324 + TART LINE telomeric 2045 2518 -11959 9 709 2302 23 8 0 chrUextra 16357335 16357600 -12647056 + PROTOP_A DNA P 1 267 -838 9 709 6492 0 0 0 chrUextra 16357700 16358406 -12646250 + FW_DM LINE Jockey 2227 2932 -1760 9 709 6478 0 3 0 chrUextra 16358506 16359212 -12645444 + R1_DM LINE R1 1354 2061 -3295 9 709 1429 6 22 16 chrUextra 16359312 16359497 -12645159 + NTS_DM Other Other 55 240 0 9 709 1972 4 17 13 chrUextra 16359497 16359736 -12644920 + NTS_DM Other Other 1 240 0 9 709 1841 21 17 17 chrUextra 16359736 16359976 -12644680 + NTS_DM Other Other 1 240 0 9 709 375 24 0 0 chrUextra 16359976 16360018 -12644638 + NTS_DM Other Other 1 42 -198 9 709 643 117 166 14 chrUextra 16360164 16360303 -12644353 - DNAREP1_DM LINE Penelope -209 385 226 9 709 267 267 57 98 chrUextra 16360354 16360761 -12643895 + I_DM LINE I 3503 3892 -2339 9 709 3655 30 85 3 chrUextra 16360924 16361630 -12643026 - R1_DM LINE R1 -35 5321 4558 9 709 22 35 0 0 chrUextra 16362034 16362063 -12642593 + AT_rich Low_complexity Low_complexity 1 29 0 9 709 2017 287 17 13 chrUextra 16362549 16363241 -12641415 - ROVER-I_DM LTR Gypsy -2237 4347 3653 9 709 847 102 0 0 chrUextra 16363342 16363470 -12641186 - ARS406_DM Unknown Unknown -225 128 1 9 709 3199 173 10 10 chrUextra 16363364 16364042 -12640614 + SAR_DM Satellite Satellite 180 857 -615 9 709 358 61 20 0 chrUextra 16363999 16364048 -12640608 - ARS406_DM Unknown Unknown -164 189 140 9 709 2506 124 11 16 chrUextra 16364151 16364854 -12639802 - DMSAT6 Satellite Satellite -3 699 1 9 709 4420 6 39 0 chrUextra 16364955 16365466 -12639190 + IDEFIX_LTR LTR Gypsy 64 594 0 9 709 3986 133 16 9 chrUextra 16365764 16366447 -12638209 - TART LINE telomeric -4840 9637 8950 9 709 1039 0 0 0 chrUextra 16366566 16366680 -12637976 - DM1731_LTR LTR Copia -222 114 1 9 709 21 0 0 0 chrUextra 16366695 16366716 -12637940 + AT_rich Low_complexity Low_complexity 1 21 0 9 709 312 83 0 59 chrUextra 16366718 16366769 -12637887 - PROTOP_B DNA P -1094 59 12 9 709 6559 0 0 0 chrUextra 16367373 16368078 -12636578 - DOC LINE Jockey -1952 2773 2069 9 709 3232 180 8 8 chrUextra 16368179 16368850 -12635806 - SAR_DM Satellite Satellite -610 862 192 9 709 925 85 0 0 chrUextra 16368754 16368884 -12635772 + ARS406_DM Unknown Unknown 1 130 -223 9 709 34 24 0 0 chrUextra 16369191 16369232 -12635424 + AT_rich Low_complexity Low_complexity 1 41 0 9 709 21 95 0 0 chrUextra 16369445 16369508 -12635148 + AT_rich Low_complexity Low_complexity 1 63 0 9 709 1562 6 0 0 chrUextra 16369520 16369690 -12634966 + LSU-rRNA_Dme rRNA rRNA 1 170 -3730 9 709 2839 3 6 9 chrUextra 16370596 16370924 -12633732 + LSU-rRNA_Dme rRNA rRNA 1465 1791 -2109 9 709 3177 0 0 0 chrUextra 16370965 16371302 -12633354 + LSU-rRNA_Dme rRNA rRNA 1788 2124 -1776 9 709 1986 0 17 13 chrUextra 16371426 16371665 -12632991 + NTS_DM Other Other 1 240 0 9 709 1140 16 0 0 chrUextra 16371665 16371793 -12632863 + NTS_DM Other Other 1 128 -112 9 709 2844 10 0 6 chrUextra 16371792 16372108 -12632548 + R2_DM LINE R2 1 314 -3293 9 709 3273 179 13 9 chrUextra 16372217 16372914 -12631742 - SAR_DM Satellite Satellite -535 937 238 9 709 866 278 0 33 chrUextra 16373018 16373260 -12631396 - Gypsy3_I LTR Gypsy -3913 2264 2031 9 709 456 198 0 11 chrUextra 16373633 16373720 -12630936 - Gypsy3_I LTR Gypsy -4643 1534 1449 9 709 6540 0 3 1 chrUextra 16373820 16374526 -12630130 - SSU-rRNA_Dme rRNA rRNA -48 1947 1241 9 709 6549 0 0 1 chrUextra 16374626 16375332 -12629324 - MAX_I LTR Pao -4204 3710 3006 9 709 2211 237 118 34 chrUextra 16375434 16376138 -12628518 + Gypsy6_I LTR Gypsy 5151 5913 -1099 9 709 2542 104 18 25 chrUextra 16376238 16376910 -12627746 + DMSAT6 Satellite Satellite 1 666 -233 9 709 6022 27 0 0 chrUextra 16377044 16377742 -12626914 + Gypsy4_I LTR Gypsy 933 1630 -4658 9 709 1615 190 52 18 chrUextra 16377850 16378556 -12626100 + SAR_DM Satellite Satellite 1 730 -208 9 709 6184 23 0 0 chrUextra 16378662 16379362 -12625294 + R1_DM LINE R1 1626 2325 -3031 9 709 28 48 0 0 chrUextra 16379631 16379673 -12624983 + AT_rich Low_complexity Low_complexity 1 42 0 9 709 531 129 24 0 chrUextra 16379946 16380031 -12624625 - NTS_DM Other Other -150 90 4 9 709 5612 1 4 69 chrUextra 16380268 16380974 -12623682 + LSU-rRNA_Dme rRNA rRNA 1274 1933 -1967 9 709 6520 3 1 0 chrUextra 16381074 16381780 -12622876 + DOC LINE Jockey 3152 3858 -867 9 709 34 24 0 0 chrUextra 16382995 16383036 -12621620 + AT_rich Low_complexity Low_complexity 1 41 0 9 709 21 95 0 0 chrUextra 16383249 16383312 -12621344 + AT_rich Low_complexity Low_complexity 1 63 0 9 709 628 0 0 0 chrUextra 16383324 16383392 -12621264 + LSU-rRNA_Dme rRNA rRNA 1 68 -3832 9 88 6546 4 0 0 chrUextra 16383492 16384194 -12620462 - SSU-rRNA_Dme rRNA rRNA -1293 702 1 9 710 5677 43 13 10 chrUextra 16384298 16385004 -12619652 + CIRCE LINE Composite 2987 3694 -2662 9 710 5360 50 61 0 chrUextra 16385105 16385810 -12618846 + IDEFIX_I LTR Gypsy 2082 2829 -2799 9 710 6053 20 7 8 chrUextra 16386716 16387422 -12617234 + FW_DM LINE Jockey 3779 4483 -209 9 710 6438 6 0 0 chrUextra 16387522 16388228 -12616428 - DMRT1B LINE R1 -180 5003 4298 9 710 6621 0 0 0 chrUextra 16388328 16389034 -12615622 - BS2 LINE Jockey -86 4635 3930 9 710 6071 1 0 0 chrUextra 16389134 16389840 -12614816 - R1_DM LINE R1 -3484 1872 1167 9 710 246 150 0 0 chrUextra 16390110 16390150 -12614506 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 710 22 56 0 0 chrUextra 16390155 16390191 -12614465 + AT_rich Low_complexity Low_complexity 1 36 0 9 710 3364 0 0 0 chrUextra 16390263 16390646 -12614010 - LSU-rRNA_Dme rRNA rRNA 0 3900 3518 9 710 2756 199 80 13 chrUextra 16390747 16391449 -12613207 - TAHRE LINE telomeric -122 10341 9593 9 710 5557 0 3 0 chrUextra 16391552 16392258 -12612398 + DM176_I LTR Gypsy 5648 6355 -65 9 710 6064 3 0 0 chrUextra 16392358 16393064 -12611592 - FW_DM LINE Jockey -3185 1507 802 9 710 6026 14 0 0 chrUextra 16393165 16393870 -12610786 + Invader1_I LTR Gypsy 55 759 -2427 9 710 5886 11 0 0 chrUextra 16393970 16394676 -12609980 + IDEFIX_I LTR Gypsy 903 1608 -4020 9 710 3094 16 3 0 chrUextra 16394776 16395148 -12609508 - DIVER2_I LTR Pao -32 4115 3743 9 710 1526 29 0 99 chrUextra 16395146 16395379 -12609277 - DIVER2_I LTR Pao -2572 1575 1366 9 710 5040 23 11 50 chrUextra 16395591 16396288 -12608368 - BATUMI_I LTR Pao -5196 2767 2098 9 710 5908 17 1 0 chrUextra 16396388 16397094 -12607562 - R1_DM LINE R1 -2944 2412 1706 9 710 4538 11 4 0 chrUextra 16397194 16397735 -12606921 + DMRT1A LINE R1 4232 4774 -409 9 710 195 69 0 0 chrUextra 16397743 16397772 -12606884 + (A)n Simple_repeat Simple_repeat 1 29 0 9 710 1119 8 0 0 chrUextra 16397772 16397900 -12606756 + (CACAA)n Simple_repeat Simple_repeat 2 129 0 9 710 1571 169 42 9 chrUextra 16398001 16398672 -12605984 + SAR_DM Satellite Satellite 1 693 -677 9 710 2224 194 25 78 chrUextra 16398806 16399511 -12605145 - TART_B1 LINE telomeric -9089 1565 898 9 710 294 333 13 6 chrUextra 16399612 16399769 -12604887 - BLASTOPIA_I LTR Gypsy -783 3698 3541 9 710 343 289 18 25 chrUextra 16400106 16400269 -12604387 - MDG3_I LTR Gypsy -1562 3424 3263 9 710 23 33 0 0 chrUextra 16401080 16401110 -12603546 + AT_rich Low_complexity Low_complexity 1 30 0 9 710 2796 180 10 22 chrUextra 16402030 16402718 -12601938 + SAR_DM Satellite Satellite 440 1119 -353 9 710 343 206 10 19 chrUextra 16402632 16402736 -12601920 - XDMR_DM Unknown Unknown 0 360 258 9 710 2243 7 0 0 chrUextra 16402836 16403108 -12601548 + G2_DM LINE Jockey 2831 3102 0 9 710 3188 19 9 2 chrUextra 16403109 16403542 -12601114 - STALKER4_I LTR Gypsy -67 6463 6028 9 710 508 29 0 0 chrUextra 16403642 16403710 -12600946 + NTS_DM Other Other 66 133 -107 9 710 1252 18 0 6 chrUextra 16403710 16403875 -12600781 + NTS_DM Other Other 38 201 -39 9 710 21 57 0 0 chrUextra 16403875 16403910 -12600746 + AT_rich Low_complexity Low_complexity 1 35 0 9 710 832 9 9 27 chrUextra 16403936 16404047 -12600609 + NTS_DM Other Other 25 133 -107 9 710 817 0 0 0 chrUextra 16404047 16404143 -12600513 + NTS_DM Other Other 38 133 -107 9 710 1408 20 20 20 chrUextra 16404143 16404346 -12600310 + NTS_DM Other Other 38 240 0 9 710 6036 0 3 3 chrUextra 16404450 16405154 -12599502 - SSU-rRNA_Dme rRNA rRNA -454 1541 838 9 710 5079 69 0 0 chrUextra 16405260 16405960 -12598696 + STALKER4_I LTR Gypsy 5109 5808 -722 9 710 637 14 0 0 chrUextra 16406060 16406134 -12598522 - NTS_DM Other Other -166 74 1 9 710 1438 15 20 20 chrUextra 16406134 16406337 -12598319 - NTS_DM Other Other 0 240 38 9 710 870 9 0 27 chrUextra 16406337 16406449 -12598207 - NTS_DM Other Other -107 133 25 9 710 1234 24 0 6 chrUextra 16406501 16406666 -12597990 - NTS_DM Other Other -39 201 38 9 710 774 40 0 0 chrUextra 16406666 16406766 -12597890 - NTS_DM Other Other -107 133 34 9 710 1060 0 0 0 chrUextra 16406866 16406989 -12597667 - NTS_DM Other Other -117 123 1 9 710 1811 13 17 13 chrUextra 16406989 16407228 -12597428 - NTS_DM Other Other 0 240 1 9 710 1756 17 17 17 chrUextra 16407228 16407468 -12597188 - NTS_DM Other Other 0 240 1 9 710 597 30 39 39 chrUextra 16407468 16407572 -12597084 - NTS_DM Other Other 0 240 137 9 710 47 0 0 0 chrUextra 16408011 16408058 -12596598 + AT_rich Low_complexity Low_complexity 1 47 0 9 710 1779 15 0 68 chrUextra 16408074 16408354 -12596302 - Gypsy4_I LTR Gypsy -5911 377 117 9 710 5733 8 8 0 chrUextra 16409284 16409990 -12594666 + QUASIMODO_I LTR Gypsy 3779 4490 -1570 9 710 6066 1 1 0 chrUextra 16410090 16410796 -12593860 - BARI_DM DNA Tc1 -913 815 109 9 710 1960 167 7 10 chrUextra 16410896 16411308 -12593348 - SAR_DM Satellite Satellite -436 1036 626 9 710 1649 122 71 0 chrUextra 16411308 16411602 -12593054 - MAX_LTR LTR Pao 0 321 7 9 710 973 40 0 0 chrUextra 16411702 16411828 -12592828 - ZAM_I LTR Gypsy -6872 618 493 9 710 2198 11 0 78 chrUextra 16411829 16412136 -12592520 + DM176_LTR LTR Gypsy 1 283 -224 9 710 2020 20 16 0 chrUextra 16412137 16412390 -12592266 + DM176_LTR LTR Gypsy 251 507 0 9 710 5966 10 0 0 chrUextra 16412508 16413214 -12591442 - Gypsy4_I LTR Gypsy -461 5827 5122 9 710 3069 183 11 8 chrUextra 16413314 16414019 -12590637 + SAR_DM Satellite Satellite 302 1008 -464 9 710 4655 11 12 0 chrUextra 16414120 16414678 -12589978 - PROTOP_A DNA P -540 565 1 9 710 812 174 0 0 chrUextra 16414678 16414826 -12589830 - TIRANT_I LTR Gypsy -4971 2721 2574 9 710 344 61 20 0 chrUextra 16414926 16414975 -12589681 + ARS406_DM Unknown Unknown 140 189 -164 9 710 2643 158 10 7 chrUextra 16414932 16415632 -12589024 - SAR_DM Satellite Satellite -975 702 1 9 710 5950 1 0 7 chrUextra 16415735 16416438 -12588218 - SSU-rRNA_Dme rRNA rRNA -393 1602 905 9 710 4197 21 4 0 chrUextra 16416538 16417049 -12587607 - PROTOP_A DNA P -592 513 1 9 710 1536 46 0 5 chrUextra 16417049 16417244 -12587412 - PROTOP_A DNA P -31 1074 881 9 710 6136 4 0 0 chrUextra 16417344 16418050 -12586606 - DMRT1A LINE R1 -2575 2608 1903 9 710 4750 8 1 37 chrUextra 16419762 16420468 -12584188 + DM412B_LTR LTR Gypsy 1 571 0 9 710 540 0 0 0 chrUextra 16420569 16420631 -12584025 - BEL_LTR LTR Pao -299 62 1 9 710 5608 0 0 5 chrUextra 16420631 16421274 -12583382 - BEL_I LTR Pao 0 5404 4765 9 710 2471 154 49 11 chrUextra 16421388 16422080 -12582576 + SAR_DM Satellite Satellite 1 718 -493 9 710 6074 0 0 1 chrUextra 16422180 16422886 -12581770 - DM1731_I LTR Copia -1445 2531 1827 9 710 3143 174 10 9 chrUextra 16422991 16423692 -12580964 + SAR_DM Satellite Satellite 321 1022 -450 9 710 3077 176 6 7 chrUextra 16423800 16424491 -12580165 + SAR_DM Satellite Satellite 214 903 -569 9 710 5986 0 0 0 chrUextra 16424598 16425304 -12579352 - MDG3_I LTR Gypsy -799 4187 3482 9 710 6010 6 0 0 chrUextra 16425406 16426110 -12578546 - FW_DM LINE Jockey -852 3840 3137 9 710 3285 46 0 9 chrUextra 16426210 16426646 -12578010 + DMCR1A LINE CR1 3803 4234 -236 9 710 779 88 18 0 chrUextra 16426648 16426762 -12577894 + DMCR1A LINE CR1 4353 4468 -2 9 710 913 66 199 0 chrUextra 16426765 16426916 -12577740 - Transib5 DNA Transib -591 2410 2230 9 710 334 94 0 0 chrUextra 16427016 16427069 -12577587 + DOC5_DM LINE Jockey 3920 3972 -710 9 710 1832 185 4 7 chrUextra 16427826 16428526 -12576130 + SAR_DM Satellite Satellite 1 698 -569 9 710 2976 6 45 0 chrUextra 16428628 16428652 -12576004 - QUASIMODO_I LTR Gypsy -5686 374 351 9 710 218 56 0 27 chrUextra 16428652 16428689 -12575967 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 9 710 2976 6 45 0 chrUextra 16428689 16429022 -12575634 - QUASIMODO_I LTR Gypsy -5710 350 2 9 710 2652 3 0 3 chrUextra 16429022 16429334 -12575322 - QUASIMODO_LTR LTR Gypsy 0 658 348 9 710 6113 0 1 3 chrUextra 16429434 16430140 -12574516 - SSU-rRNA_Dme rRNA rRNA -87 1908 1204 9 710 6078 1 0 0 chrUextra 16431046 16431752 -12572904 + DMRT1A LINE R1 2457 3162 -2021 9 710 697 193 0 7 chrUextra 16432244 16432390 -12572266 + DMLTR5 LTR Gypsy 122 266 0 9 710 351 49 65 16 chrUextra 16432389 16432451 -12572205 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 9 710 244 128 0 21 chrUextra 16432473 16432521 -12572135 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 9 710 5897 9 0 7 chrUextra 16432658 16433364 -12571292 + DMRT1B LINE R1 2627 3327 -1856 9 710 2731 179 53 20 chrUextra 16433467 16434164 -12570492 + SAR_DM Satellite Satellite 399 1118 -354 9 710 1142 152 108 17 chrUextra 16434270 16434565 -12570091 + ROVER-I_DM LTR Gypsy 6263 6584 0 9 710 1724 107 58 50 chrUextra 16434565 16434929 -12569727 + ROVER-LTR_DM LTR Gypsy 1 367 0 9 710 265 106 21 0 chrUextra 16434929 16434976 -12569680 + ROVER-I_DM LTR Gypsy 1 48 -6536 9 710 478 286 27 27 chrUextra 16435165 16435463 -12569193 + DM176_I LTR Gypsy 1831 2128 -4292 9 710 1363 12 6 6 chrUextra 16435435 16435603 -12569053 - TLD3 Unknown Unknown -3 169 2 9 710 233 342 0 0 chrUextra 16435581 16435742 -12568914 + ROVER-I_DM LTR Gypsy 2576 2736 -3848 9 710 4363 118 6 1 chrUextra 16436688 16437394 -12567262 - S_DM DNA Tc1 -130 1606 898 9 710 6184 3 0 0 chrUextra 16438300 16439006 -12565650 - SSU-rRNA_Dme rRNA rRNA -1201 794 89 9 710 2133 63 6 36 chrUextra 16439108 16439438 -12565218 - ROO_I LTR Pao -7823 433 114 9 710 2772 29 0 3 chrUextra 16439471 16439812 -12564844 - ROO_LTR LTR Pao 0 428 89 9 710 5595 31 0 0 chrUextra 16439912 16440618 -12564038 + MDG1_I LTR Gypsy 2139 2844 -3752 9 710 5954 1 4 4 chrUextra 16440718 16441424 -12563232 - LSU-rRNA_Dme rRNA rRNA -2160 1740 1035 9 710 5789 23 3 0 chrUextra 16441524 16442230 -12562426 - R1_DM LINE R1 -1542 3814 3107 9 710 3959 169 0 3 chrUextra 16442330 16443036 -12561620 + ROVER-I_DM LTR Gypsy 4312 5015 -1569 9 710 2986 178 9 17 chrUextra 16443136 16443833 -12560823 + SAR_DM Satellite Satellite 421 1111 -361 9 710 314 176 0 26 chrUextra 16443766 16443842 -12560814 - XDMR_DM Unknown Unknown -10 350 277 9 710 3986 11 0 0 chrUextra 16443942 16444408 -12560248 - T412LTR LTR LTR -15 466 1 9 710 2815 6 0 0 chrUextra 16444298 16444648 -12560008 - DM412 LTR Gypsy 0 6897 6548 9 710 2586 12 0 39 chrUextra 16444749 16445082 -12559574 - ROO_I LTR Pao -7936 320 1 9 710 2949 24 54 0 chrUextra 16445082 16445454 -12559202 - ROO_LTR LTR Pao 0 428 37 9 710 6071 1 3 0 chrUextra 16445554 16446260 -12558396 + ROO_I LTR Pao 2172 2879 -5377 9 710 5577 26 0 13 chrUextra 16446360 16447066 -12557590 - FW_DM LINE Jockey -2672 2020 1324 9 710 3016 169 41 16 chrUextra 16447169 16447871 -12556785 + SAR_DM Satellite Satellite 392 1111 -361 9 710 2981 181 10 10 chrUextra 16447975 16448678 -12555978 - SAR_DM Satellite Satellite -514 958 256 9 710 2470 3 0 0 chrUextra 16448778 16449062 -12555594 - LSU-rRNA_Dme rRNA rRNA -977 2923 2640 9 710 3654 5 0 0 chrUextra 16449060 16449484 -12555172 - R1_DM LINE R1 0 5356 4933 9 710 21 0 0 0 chrUextra 16449874 16449895 -12554761 + AT_rich Low_complexity Low_complexity 1 21 0 9 710 537 182 81 51 chrUextra 16450017 16450214 -12554442 - DMCR1A LINE CR1 -41 4429 4227 9 710 5894 4 0 1 chrUextra 16450390 16451096 -12553560 + LSU-rRNA_Dme rRNA rRNA 293 997 -2903 9 710 5976 0 1 0 chrUextra 16451196 16451902 -12552754 - ROO_I LTR Pao -3323 4933 4227 9 710 2545 30 0 0 chrUextra 16452002 16452338 -12552318 - Invader2_I LTR Gypsy -4256 336 1 9 710 2286 11 0 0 chrUextra 16452338 16452604 -12552052 - Invader2_LTR LTR Gypsy 0 266 1 9 710 572 160 0 0 chrUextra 16452605 16452705 -12551951 - TV1I LTR Gypsy -3580 2383 2284 9 710 462 304 11 11 chrUextra 16452855 16453067 -12551589 + Gypsy10_I LTR Gypsy 1823 2220 -3058 9 710 1765 217 40 5 chrUextra 16453088 16453509 -12551147 + Gypsy4_I LTR Gypsy 2144 2579 -3709 9 710 2678 82 103 74 chrUextra 16453750 16454301 -12550355 + MAX_I LTR Pao 1 567 -7347 9 710 1041 99 0 0 chrUextra 16454429 16455124 -12549532 + (CAAGA)n Simple_repeat Simple_repeat 1 695 0 9 710 6025 1 1 0 chrUextra 16455226 16455932 -12548724 + R1_DM LINE R1 2824 3530 -1826 9 710 1292 0 0 0 chrUextra 16456032 16456181 -12548475 - LSU-rRNA_Dme rRNA rRNA -3751 149 1 9 710 21 95 0 0 chrUextra 16456193 16456256 -12548400 + AT_rich Low_complexity Low_complexity 1 63 0 9 710 34 24 0 0 chrUextra 16456469 16456510 -12548146 + AT_rich Low_complexity Low_complexity 1 41 0 9 710 3236 172 7 7 chrUextra 16456838 16457540 -12547116 + SAR_DM Satellite Satellite 335 1036 -436 9 710 5997 0 1 1 chrUextra 16457644 16458350 -12546306 + ROO_I LTR Pao 5335 6040 -2216 9 710 220 252 26 26 chrUextra 16458465 16458579 -12546077 + (CTAAA)n Simple_repeat Simple_repeat 3 116 0 9 710 1381 266 15 46 chrUextra 16458598 16459145 -12545511 + ROVER-I_DM LTR Gypsy 768 1297 -5287 9 710 3217 179 6 6 chrUextra 16461676 16462378 -12542278 + SAR_DM Satellite Satellite 346 1047 -425 9 710 2284 106 18 15 chrUextra 16462482 16463165 -12541491 - DMSAT6 Satellite Satellite -64 685 1 9 710 2431 110 19 5 chrUextra 16463316 16463992 -12540664 - DMSAT6 Satellite Satellite 0 686 1 9 710 3069 171 11 10 chrUextra 16464092 16464791 -12539865 + SAR_DM Satellite Satellite 377 1076 -396 9 710 2364 167 11 49 chrUextra 16465705 16466374 -12538282 + HETA LINE telomeric 35 677 -5404 9 710 5998 6 1 4 chrUextra 16466510 16467216 -12537440 + SSU-rRNA_Dme rRNA rRNA 963 1666 -329 9 710 6014 4 0 1 chrUextra 16467316 16468022 -12536634 + FW_DM LINE Jockey 383 1087 -3605 9 710 22 0 0 0 chrUextra 16468467 16468489 -12536167 + AT_rich Low_complexity Low_complexity 1 22 0 9 710 5427 7 3 0 chrUextra 16468928 16469634 -12535022 + DM176_I LTR Gypsy 5623 6330 -90 9 710 4558 62 3 3 chrUextra 16469737 16470353 -12534303 - R1_DM LINE R1 -4740 616 1 9 710 425 37 0 0 chrUextra 16470386 16470440 -12534216 - R1_DM LINE R1 0 5356 5303 9 710 2826 176 38 10 chrUextra 16470544 16471237 -12533419 + SAR_DM Satellite Satellite 192 903 -569 9 710 5702 20 20 6 chrUextra 16471346 16472052 -12532604 - FW_DM LINE Jockey -294 4398 3683 9 710 1056 106 24 0 chrUextra 16472958 16473128 -12531528 + TART LINE telomeric 9788 9961 -4516 9 710 2078 149 179 40 chrUextra 16473140 16473664 -12530992 + TART LINE telomeric 10040 10636 -3841 9 710 5804 23 0 0 chrUextra 16474570 16475276 -12529380 + R1_DM LINE R1 2658 3363 -1993 9 710 23 0 0 0 chrUextra 16475853 16475876 -12528780 + AT_rich Low_complexity Low_complexity 1 23 0 9 710 3944 36 0 28 chrUextra 16476375 16476885 -12527771 - Baggins1 LINE LOA 0 5453 4958 9 710 2256 0 0 0 chrUextra 16476988 16477247 -12527409 + LSU-rRNA_Dme rRNA rRNA 3642 3900 0 9 710 22 56 0 0 chrUextra 16477319 16477355 -12527301 + AT_rich Low_complexity Low_complexity 1 36 0 9 710 246 150 0 0 chrUextra 16477360 16477400 -12527256 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 710 246 150 0 0 chrUextra 16477452 16477492 -12527164 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 710 246 150 0 0 chrUextra 16477544 16477584 -12527072 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 710 255 125 0 0 chrUextra 16477627 16477667 -12526989 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 710 5609 24 4 8 chrUextra 16477794 16478500 -12526156 - BATUMI_I LTR Pao -5375 2588 1886 9 710 979 47 0 0 chrUextra 16479178 16479306 -12525350 + PROTOP_B DNA P 74 201 -952 9 710 1060 150 29 21 chrUextra 16479527 16479765 -12524891 + NTS_DM Other Other 1 240 0 9 710 258 125 21 0 chrUextra 16479765 16479813 -12524843 + NTS_DM Other Other 1 49 -191 9 710 723 119 22 0 chrUextra 16479903 16480037 -12524619 + NTS_DM Other Other 1 137 -103 9 710 277 62 15 15 chrUextra 16480045 16480111 -12524545 + NTS_DM Other Other 108 173 -67 9 710 1370 75 15 0 chrUextra 16480213 16480414 -12524242 - R1_DM LINE R1 -5152 204 1 9 710 3844 17 25 0 chrUextra 16480447 16480918 -12523738 - R1_DM LINE R1 0 5356 4874 9 710 1666 294 31 34 chrUextra 16481019 16481724 -12522932 - MICROPIA_I LTR Gypsy -1065 3411 2709 9 710 3035 180 9 7 chrUextra 16481825 16482518 -12522138 + SAR_DM Satellite Satellite 244 937 -535 9 710 1178 0 0 0 chrUextra 16483436 16483572 -12521084 - ALUII_DM Unknown Unknown -104 136 1 9 710 21 57 0 0 chrUextra 16483572 16483607 -12521049 + AT_rich Low_complexity Low_complexity 1 35 0 9 710 22 35 0 0 chrUextra 16483804 16483833 -12520823 + AT_rich Low_complexity Low_complexity 1 29 0 9 710 37 39 0 0 chrUextra 16483915 16483966 -12520690 + AT_rich Low_complexity Low_complexity 1 51 0 9 710 4418 74 45 15 chrUextra 16484244 16484927 -12519729 - MDG1_I LTR Gypsy -5892 704 1 9 710 5379 41 1 3 chrUextra 16485854 16486560 -12518096 + TC1-2_DM DNA Tc1 84 788 -856 9 710 5593 1 0 0 chrUextra 16486716 16487366 -12517290 + FW_DM LINE Jockey 1 650 -4042 9 710 1744 21 17 17 chrUextra 16487482 16487722 -12516934 - NTS_DM Other Other 0 240 1 9 710 1697 30 17 17 chrUextra 16487722 16487962 -12516694 - NTS_DM Other Other 0 240 1 9 710 1409 34 19 19 chrUextra 16487962 16488172 -12516484 - NTS_DM Other Other 0 240 31 9 710 1060 0 0 0 chrUextra 16488272 16488394 -12516262 - R2_DM LINE R2 -3485 122 1 9 710 5061 3 0 0 chrUextra 16488396 16488978 -12515678 - LSU-rRNA_Dme rRNA rRNA -1324 2576 1995 9 710 5946 16 0 0 chrUextra 16489884 16490588 -12514068 - STALKER4_I LTR Gypsy -1843 4687 3984 9 710 4685 0 0 0 chrUextra 16490688 16491262 -12513394 - ROO_I LTR Pao -51 8205 7632 9 710 1168 0 7 0 chrUextra 16491252 16491393 -12513263 + ROO_I LTR Pao 1947 2088 -6168 9 710 1944 9 0 0 chrUextra 16492298 16492526 -12512130 + R1_DM LINE R1 4686 4913 -443 9 710 4174 2 0 0 chrUextra 16492524 16493003 -12511653 - LSU-rRNA_Dme rRNA rRNA -1245 2655 2177 9 710 2243 11 0 0 chrUextra 16493104 16493366 -12511290 + R1_DM LINE R1 5095 5356 0 9 710 3024 59 5 5 chrUextra 16493399 16493808 -12510848 + R1_DM LINE R1 1 409 -4947 9 710 6065 0 0 0 chrUextra 16493908 16494613 -12510043 - ROO_I LTR Pao -6313 1943 1239 9 710 21 0 0 0 chrUextra 16494897 16494918 -12509738 + AT_rich Low_complexity Low_complexity 1 21 0 9 710 1246 74 18 88 chrUextra 16495018 16495349 -12509307 + ROO_I LTR Pao 258 640 -7616 9 710 294 106 0 0 chrUextra 16495349 16495396 -12509260 + (CAG)n Simple_repeat Simple_repeat 1 47 0 9 710 1500 0 0 0 chrUextra 16495518 16495690 -12508966 - SSU-rRNA_Dme rRNA rRNA -1823 172 1 9 710 32 0 0 0 chrUextra 16495822 16495854 -12508802 + AT_rich Low_complexity Low_complexity 1 32 0 9 710 27 49 0 0 chrUextra 16496182 16496223 -12508433 + AT_rich Low_complexity Low_complexity 1 41 0 9 710 365 286 118 28 chrUextra 16496390 16496852 -12507804 + BURDOCK_I LTR Gypsy 1166 1852 -4008 9 710 997 42 7 47 chrUextra 16496879 16497028 -12507628 - G5A_DM LINE Jockey -3 2838 2696 9 710 3215 169 10 10 chrUextra 16497938 16498638 -12506018 - SAR_DM Satellite Satellite -425 1047 348 9 710 1831 182 2 7 chrUextra 16498738 16499148 -12505508 - SAR_DM Satellite Satellite -569 903 496 9 710 1365 159 4 11 chrUextra 16499163 16499443 -12505213 - SAR_DM Satellite Satellite -569 903 626 9 710 1841 192 9 11 chrUextra 16499544 16499997 -12504659 - SAR_DM Satellite Satellite -514 958 507 9 710 1236 162 12 0 chrUextra 16500000 16500247 -12504409 - SAR_DM Satellite Satellite -610 862 613 9 710 1656 0 0 0 chrUextra 16500348 16500538 -12504118 - ROO_LTR LTR Pao -238 190 1 9 710 297 235 37 15 chrUextra 16500562 16500696 -12503960 + TV1I LTR Gypsy 3998 4134 -1829 9 710 782 240 56 16 chrUextra 16500689 16501011 -12503645 + QUASIMODO_I LTR Gypsy 4257 4591 -1469 9 710 5241 45 8 3 chrUextra 16501153 16501858 -12502798 - R1_DM LINE R1 -4284 1072 364 9 710 413 255 0 0 chrUextra 16501959 16502057 -12502599 + MICROPIA_I LTR Gypsy 3753 3850 -626 9 710 5712 31 0 1 chrUextra 16502763 16503468 -12501188 + MAX_I LTR Pao 1692 2395 -5519 9 710 5791 0 3 0 chrUextra 16503568 16504271 -12500385 + QUASIMODO_I LTR Gypsy 3558 4262 -1798 9 710 3082 187 10 4 chrUextra 16504376 16505074 -12499582 + SAR_DM Satellite Satellite 346 1047 -425 9 710 6113 1 0 0 chrUextra 16505178 16505883 -12498773 - DMRT1B LINE R1 -2763 2420 1716 9 710 394 3 0 164 chrUextra 16506055 16506476 -12498180 + (TATAG)n Simple_repeat Simple_repeat 1 351 0 9 710 1167 85 40 10 chrUextra 16506480 16506682 -12497974 + FB4_DM DNA Tc1 1367 1574 -2515 9 710 3696 0 0 0 chrUextra 16506788 16507208 -12497448 + ROO_LTR LTR Pao 9 428 0 9 710 2450 0 0 3 chrUextra 16507208 16507493 -12497163 + ROO_I LTR Pao 1 284 -7972 9 710 1940 308 3 1 chrUextra 16507605 16508278 -12496378 - Invader1_I LTR Gypsy -1048 2138 1465 9 710 2610 182 19 29 chrUextra 16508398 16509103 -12495553 + SAR_DM Satellite Satellite 1 697 -369 9 710 5783 25 1 0 chrUextra 16510813 16511518 -12493138 - R1_DM LINE R1 -1962 3394 2689 9 710 6169 1 1 0 chrUextra 16511618 16512323 -12492333 - SSU-rRNA_Dme rRNA rRNA -1092 903 198 9 710 415 133 139 17 chrUextra 16512425 16512540 -12492116 - DNAREP1_DM LINE Penelope -291 303 175 9 710 1703 162 61 61 chrUextra 16512638 16513079 -12491577 - DNAREP1_DM LINE Penelope -21 573 133 9 710 257 29 0 0 chrUextra 16513082 16513116 -12491540 - DNAREP1_DM LINE Penelope -35 559 526 9 710 2942 181 14 9 chrUextra 16513228 16513925 -12490731 + SAR_DM Satellite Satellite 195 895 -577 9 710 6130 4 0 0 chrUextra 16514033 16514738 -12489918 + DM1731_I LTR Copia 2653 3357 -619 9 88 5908 13 0 1 chrUextra 16514838 16515543 -12489113 - DMRT1B LINE R1 -410 4773 4070 9 711 5959 6 0 1 chrUextra 16515643 16516348 -12488308 - DMRT1B LINE R1 -2419 2764 2061 9 711 5909 7 1 0 chrUextra 16516448 16517153 -12487503 + STALKER4_I LTR Gypsy 1875 2580 -3950 9 711 479 122 100 0 chrUextra 16517501 16517591 -12487065 + DNAREP1_DM LINE Penelope 496 594 0 9 711 33 25 0 0 chrUextra 16517647 16517687 -12486969 + AT_rich Low_complexity Low_complexity 1 40 0 9 711 2956 181 8 11 chrUextra 16518058 16518763 -12485893 + SAR_DM Satellite Satellite 209 911 -561 9 711 5717 16 6 3 chrUextra 16518863 16519568 -12485088 - R1_DM LINE R1 -1160 4196 3490 9 711 2175 39 3 3 chrUextra 16520851 16521157 -12483499 - ROO_I LTR Pao -7110 1146 841 9 711 6169 3 0 0 chrUextra 16521278 16521981 -12482675 - SSU-rRNA_Dme rRNA rRNA -1292 703 1 9 711 21 0 0 0 chrUextra 16522757 16522778 -12481878 + AT_rich Low_complexity Low_complexity 1 21 0 9 711 5325 21 61 0 chrUextra 16522888 16523593 -12481063 + DMRT1B LINE R1 1932 2679 -2504 9 711 1943 172 16 35 chrUextra 16523909 16524398 -12480258 + SAR_DM Satellite Satellite 275 754 -718 9 711 1273 19 0 18 chrUextra 16524719 16524884 -12479772 - NTS_DM Other Other -78 162 1 9 711 1674 38 17 17 chrUextra 16524884 16525124 -12479532 - NTS_DM Other Other 0 240 1 9 711 506 13 51 38 chrUextra 16525124 16525203 -12479453 - NTS_DM Other Other 0 240 161 9 711 6023 0 1 6 chrUextra 16525303 16526008 -12478648 + SSU-rRNA_Dme rRNA rRNA 996 1697 -298 9 711 25 75 0 0 chrUextra 16526225 16526278 -12478378 + AT_rich Low_complexity Low_complexity 1 53 0 9 711 24 0 0 0 chrUextra 16526347 16526371 -12478285 + AT_rich Low_complexity Low_complexity 1 24 0 9 711 394 197 0 0 chrUextra 16526645 16526716 -12477940 - HETA LINE telomeric -1478 4603 4533 9 711 1104 0 0 56 chrUextra 16527001 16527144 -12477512 - 5S_DM RNA RNA 0 135 1 9 711 1176 0 0 0 chrUextra 16527385 16527520 -12477136 - 5S_DM RNA RNA 0 135 1 9 711 2062 152 66 24 chrUextra 16527718 16528332 -12476324 + Stalker2_I LTR Gypsy 312 999 -5531 9 711 22 35 0 0 chrUextra 16528608 16528637 -12476019 + AT_rich Low_complexity Low_complexity 1 29 0 9 711 51 31 0 0 chrUextra 16528965 16529030 -12475626 + AT_rich Low_complexity Low_complexity 1 65 0 9 711 655 0 0 0 chrUextra 16529331 16529408 -12475248 + DM297_LTR LTR Gypsy 338 414 0 9 711 5049 8 2 2 chrUextra 16529408 16530033 -12474623 + DM297_I LTR Gypsy 1 625 -5542 9 711 5929 1 0 0 chrUextra 16530133 16530838 -12473818 - ROO_I LTR Pao -6732 1524 820 9 711 4711 24 70 6 chrUextra 16530938 16531643 -12473013 - R1_DM LINE R1 -975 4381 3632 9 711 5324 1 4 65 chrUextra 16531743 16532448 -12472208 - LSU-rRNA_Dme rRNA rRNA -1708 2192 1531 9 711 6069 0 3 3 chrUextra 16532548 16533253 -12471403 - SSU-rRNA_Dme rRNA rRNA -29 1966 1262 9 711 2953 167 39 39 chrUextra 16533353 16534046 -12470610 - Gypsy12_LTR LTR Gypsy -38 2298 1606 9 711 3811 105 21 24 chrUextra 16534158 16534862 -12469794 - TART LINE telomeric -4385 10092 9391 9 711 2796 256 0 0 chrUextra 16534987 16535668 -12468988 + Gypsy6_I LTR Gypsy 2218 2898 -4114 9 711 1548 130 26 13 chrUextra 16535772 16536077 -12468579 - SAR_DM Satellite Satellite -435 1037 729 9 711 344 0 0 161 chrUextra 16536576 16536756 -12467900 + (CATAG)n Simple_repeat Simple_repeat 5 155 0 9 711 275 0 0 153 chrUextra 16537095 16537278 -12467378 + (ACTAG)n Simple_repeat Simple_repeat 4 158 0 9 711 1604 25 0 0 chrUextra 16537610 16537808 -12466848 - NINJA_I LTR Pao -2033 3978 3781 9 711 1797 9 0 0 chrUextra 16537817 16538027 -12466629 - NINJA_I LTR Pao -2363 3648 3439 9 711 475 33 0 0 chrUextra 16538022 16538083 -12466573 - NINJA_I LTR Pao -2790 3221 3161 9 711 5614 4 1 0 chrUextra 16538183 16538888 -12465768 - QUASIMODO_I LTR Gypsy -331 5729 5024 9 711 6180 0 1 0 chrUextra 16538988 16539693 -12464963 - SSU-rRNA_Dme rRNA rRNA -1085 910 205 9 711 5833 11 4 0 chrUextra 16539793 16540498 -12464158 + STALKER4_I LTR Gypsy 1994 2701 -3829 9 711 6164 0 3 0 chrUextra 16542208 16542913 -12461743 + LSU-rRNA_Dme rRNA rRNA 3071 3777 -123 9 711 2431 47 131 0 chrUextra 16543013 16543372 -12461284 - PROTOP DNA P -4074 406 1 9 711 736 11 0 0 chrUextra 16543818 16543907 -12460749 - NTS_DM Other Other -114 126 38 9 711 817 0 0 0 chrUextra 16543907 16544003 -12460653 - NTS_DM Other Other -107 133 38 9 711 802 9 9 36 chrUextra 16544003 16544115 -12460541 - NTS_DM Other Other -107 133 25 9 711 21 57 0 0 chrUextra 16544141 16544176 -12460480 + AT_rich Low_complexity Low_complexity 1 35 0 9 711 1252 18 0 6 chrUextra 16544176 16544341 -12460315 - NTS_DM Other Other -39 201 38 9 711 852 18 0 27 chrUextra 16544341 16544453 -12460203 - NTS_DM Other Other -107 133 25 9 711 21 36 0 0 chrUextra 16544479 16544507 -12460149 + AT_rich Low_complexity Low_complexity 1 28 0 9 711 5895 4 0 0 chrUextra 16544623 16545328 -12459328 - Invader2_I LTR Gypsy -2798 1794 1090 9 711 6169 1 1 0 chrUextra 16545428 16546133 -12458523 - LSU-rRNA_Dme rRNA rRNA -301 3599 2894 9 711 1345 12 0 17 chrUextra 16546234 16546407 -12458249 - STALKER4_LTR LTR Gypsy -157 245 76 9 711 4069 8 8 2 chrUextra 16546402 16546938 -12457718 - STALKER4_I LTR Gypsy -11 6519 5981 9 711 2936 176 13 14 chrUextra 16547843 16548547 -12456109 + SAR_DM Satellite Satellite 304 1006 -466 9 711 1062 190 30 7 chrUextra 16548649 16548919 -12455737 + SAR_DM Satellite Satellite 587 862 -610 9 711 387 94 16 0 chrUextra 16548875 16548939 -12455717 - ARS406_DM Unknown Unknown -167 186 122 9 711 1465 169 92 21 chrUextra 16548931 16549353 -12455303 + SAR_DM Satellite Satellite 205 656 -816 9 711 2784 182 33 20 chrUextra 16549453 16550158 -12454498 + SAR_DM Satellite Satellite 253 966 -506 9 711 346 0 0 0 chrUextra 16550258 16550299 -12454357 + TABOR_I LTR Gypsy 6296 6336 0 9 711 4418 2 0 0 chrUextra 16550297 16550803 -12453853 + TABOR_LTR LTR Gypsy 1 506 0 9 711 188 0 0 159 chrUextra 16550803 16550960 -12453696 + (TTGTG)n Simple_repeat Simple_repeat 4 135 0 9 711 493 302 39 25 chrUextra 16551145 16551427 -12453229 - IDEFIX_I LTR Gypsy -2802 2826 2541 9 711 227 160 51 39 chrUextra 16551505 16551583 -12453073 + (TTTA)n Simple_repeat Simple_repeat 3 81 0 9 711 5815 17 1 6 chrUextra 16551868 16552573 -12452083 + FW_DM LINE Jockey 3483 4184 -508 9 711 1461 116 8 4 chrUextra 16553497 16553740 -12450916 - BS2 LINE Jockey -4464 257 14 9 711 30 27 0 0 chrUextra 16553992 16554029 -12450627 + AT_rich Low_complexity Low_complexity 1 37 0 9 711 192 40 0 0 chrUextra 16554146 16554171 -12450485 + (TAA)n Simple_repeat Simple_repeat 1 25 0 9 711 3378 87 85 72 chrUextra 16554283 16554298 -12450358 - ACCORD2_I LTR Gypsy -236 6976 6960 9 711 185 0 40 0 chrUextra 16554298 16554323 -12450333 + (TTA)n Simple_repeat Simple_repeat 1 26 0 9 711 3378 87 85 72 chrUextra 16554323 16554988 -12449668 - ACCORD2_I LTR Gypsy -253 6959 6287 9 711 369 259 0 0 chrUextra 16555107 16555215 -12449441 + Gypsy7_I LTR Gypsy 1560 1667 -3317 9 711 4278 42 2 13 chrUextra 16555241 16555793 -12448863 - G5A_DM LINE Jockey -3 2838 2293 9 711 1896 112 23 3 chrUextra 16555922 16556271 -12448385 + MDG1_I LTR Gypsy 870 1225 -5371 9 711 2172 71 18 9 chrUextra 16556258 16556598 -12448058 + MDG1_I LTR Gypsy 1131 1473 -5123 9 711 21 89 0 0 chrUextra 16557099 16557155 -12447501 + AT_rich Low_complexity Low_complexity 1 56 0 9 711 2022 0 0 0 chrUextra 16557174 16557403 -12447253 - SSU-rRNA_Dme rRNA rRNA 0 1995 1767 9 711 6037 3 0 1 chrUextra 16557503 16558208 -12446448 - R1_DM LINE R1 -1546 3810 3107 9 711 2803 60 52 0 chrUextra 16558308 16558728 -12445928 - I_DM LINE I -5690 541 100 9 711 1012 15 0 49 chrUextra 16559113 16559257 -12445399 + Invader1_I LTR Gypsy 3050 3186 0 9 711 3623 7 2 0 chrUextra 16559257 16559679 -12444977 + Invader1_LTR LTR Gypsy 1 423 0 9 711 467 217 8 16 chrUextra 16559696 16559818 -12444838 - HETRP_DM Satellite Satellite -203 1669 1549 9 711 247 183 33 0 chrUextra 16560562 16560622 -12444034 + DM297_I LTR Gypsy 2372 2433 -3734 9 711 2172 0 0 0 chrUextra 16560723 16560970 -12443686 - LSU-rRNA_Dme rRNA rRNA -1866 2034 1788 9 711 3485 2 5 2 chrUextra 16561014 16561428 -12443228 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1374 9 711 224 185 31 0 chrUextra 16561942 16562007 -12442649 + (TAA)n Simple_repeat Simple_repeat 2 68 0 9 711 5661 27 8 0 chrUextra 16562333 16563038 -12441618 + R1_DM LINE R1 2324 3034 -2322 9 711 6017 1 1 0 chrUextra 16563138 16563843 -12440813 - DM176_I LTR Gypsy -2338 4082 3377 9 711 2953 178 35 10 chrUextra 16563943 16564648 -12440008 + SAR_DM Satellite Satellite 284 1006 -466 9 711 707 115 0 8 chrUextra 16564748 16564871 -12439785 - ARS406_DM Unknown Unknown -231 122 1 9 711 2793 185 10 10 chrUextra 16564777 16565453 -12439203 + SAR_DM Satellite Satellite 195 870 -602 9 711 1344 174 16 11 chrUextra 16566362 16567057 -12437599 + SAR_DM Satellite Satellite 1 697 -645 9 711 1790 19 0 0 chrUextra 16567163 16567376 -12437280 + R1_DM LINE R1 5144 5356 0 9 711 3322 66 4 4 chrUextra 16567409 16567867 -12436789 + R1_DM LINE R1 1 458 -4898 9 711 3073 21 126 0 chrUextra 16568773 16569478 -12435178 - Invader2_I LTR Gypsy -1820 2772 1979 9 711 849 222 237 31 chrUextra 16569582 16570029 -12434627 + TAHRE LINE telomeric 9738 10276 -187 9 711 34 24 0 0 chrUextra 16570038 16570079 -12434577 + AT_rich Low_complexity Low_complexity 1 41 0 9 711 2377 176 41 11 chrUextra 16570383 16571088 -12433568 + SAR_DM Satellite Satellite 1 725 -416 9 711 5630 1 1 0 chrUextra 16571188 16571893 -12432763 - DM176_I LTR Gypsy -201 6219 5514 9 711 1257 31 25 0 chrUextra 16571993 16572151 -12432505 + ACCORD2_I LTR Gypsy 7041 7202 -10 9 711 1777 19 0 18 chrUextra 16572151 16572370 -12432286 + ACCORD2_LTR LTR Gypsy 1 215 0 9 711 2517 16 0 43 chrUextra 16572370 16572698 -12431958 + ACCORD2_I LTR Gypsy 1 314 -6898 9 711 2927 128 36 4 chrUextra 16572798 16573501 -12431155 + DM297_I LTR Gypsy 2773 3521 -2591 9 711 918 9 0 9 chrUextra 16573603 16573716 -12430940 - NTS_DM Other Other -128 112 1 9 711 1836 8 17 13 chrUextra 16573716 16573955 -12430701 - NTS_DM Other Other 0 240 1 9 711 1731 21 17 17 chrUextra 16573955 16574195 -12430461 - NTS_DM Other Other 0 240 1 9 711 742 9 35 26 chrUextra 16574195 16574308 -12430348 - NTS_DM Other Other 0 240 127 9 711 5098 40 0 0 chrUextra 16574408 16575038 -12429618 + BATUMI_I LTR Pao 3692 4321 -3642 9 711 2739 176 21 30 chrUextra 16575214 16575918 -12428738 - SAR_DM Satellite Satellite -313 1159 462 9 711 6155 0 0 0 chrUextra 16576018 16576723 -12427933 + FW_DM LINE Jockey 3411 4115 -577 9 711 1271 6 0 24 chrUextra 16576941 16577107 -12427549 - NTS_DM Other Other -78 162 1 9 711 1847 4 17 13 chrUextra 16577107 16577346 -12427310 - NTS_DM Other Other 0 240 1 9 711 1312 0 22 16 chrUextra 16577346 16577528 -12427128 - NTS_DM Other Other 0 240 58 9 711 5701 19 3 11 chrUextra 16577628 16578333 -12426323 - BATUMI_I LTR Pao -1662 6301 5603 9 711 803 287 31 34 chrUextra 16578433 16578844 -12425812 - Copia2_I LTR Copia -2269 1893 1392 9 711 4650 19 0 2 chrUextra 16579238 16579802 -12424854 + R1_DM LINE R1 1758 2320 -3036 9 711 1116 49 0 0 chrUextra 16579801 16579943 -12424713 + R1_DM LINE R1 2531 2672 -2684 9 711 4747 37 66 0 chrUextra 16580095 16580748 -12423908 + PROTOP DNA P 1 696 -3784 9 711 865 128 5 11 chrUextra 16580981 16581170 -12423486 + S_DM DNA Tc1 1549 1736 0 9 711 392 103 0 0 chrUextra 16581197 16581255 -12423401 - FB4_DM DNA Tc1 -3014 1075 1018 9 711 860 0 0 0 chrUextra 16581653 16581755 -12422901 - ROO_LTR LTR Pao -326 102 1 9 711 4549 23 5 5 chrUextra 16581755 16582358 -12422298 - ROO_I LTR Pao 0 8256 7654 9 711 6115 0 0 1 chrUextra 16582458 16583163 -12421493 + ROO_I LTR Pao 6958 7661 -595 9 711 661 323 40 40 chrUextra 16583281 16583761 -12420895 + TV1I LTR Gypsy 490 969 -4994 9 711 705 245 0 5 chrUextra 16583763 16583968 -12420688 + TV1I LTR Gypsy 3864 4067 -1896 9 711 2970 182 6 9 chrUextra 16584070 16584764 -12419892 + SAR_DM Satellite Satellite 212 903 -569 9 711 2279 104 34 52 chrUextra 16584899 16585578 -12419078 + DMSAT6 Satellite Satellite 1 666 -3 9 711 3142 173 13 7 chrUextra 16585678 16586383 -12418273 + SAR_DM Satellite Satellite 334 1042 -430 9 711 4542 60 14 6 chrUextra 16586564 16587188 -12417468 - R1_DM LINE R1 -3119 2237 1609 9 711 4884 58 12 6 chrUextra 16587329 16587993 -12416663 - R1_DM LINE R1 -3119 2237 1570 9 711 636 82 0 84 chrUextra 16588093 16588212 -12416444 - Gypsy6A_LTR LTR Gypsy -311 109 1 9 711 2181 15 0 0 chrUextra 16588212 16588468 -12416188 - STALKER4_LTR LTR Gypsy -146 256 1 9 711 2297 18 12 9 chrUextra 16588468 16588798 -12415858 - STALKER4_I LTR Gypsy 0 6530 6200 9 711 5488 33 8 3 chrUextra 16588898 16589603 -12415053 + MDG1_I LTR Gypsy 1374 2082 -4514 9 711 1885 170 11 6 chrUextra 16589703 16590397 -12414259 + SAR_DM Satellite Satellite 1 697 -677 9 711 636 76 11 0 chrUextra 16590316 16590408 -12414248 - ARS406_DM Unknown Unknown -164 189 97 9 711 5840 10 1 3 chrUextra 16590508 16591213 -12413443 + R1_DM LINE R1 3315 4018 -1338 9 711 835 0 10 0 chrUextra 16591313 16591412 -12413244 - Invader2_LTR LTR Gypsy -166 100 1 9 711 4422 45 10 0 chrUextra 16591423 16592018 -12412638 + MDG1_I LTR Gypsy 1130 1730 -4866 9 711 2806 87 0 2 chrUextra 16592143 16592546 -12412110 + Jockey2 LINE Jockey 1419 1820 -1608 9 711 632 62 496 3 chrUextra 16592554 16592823 -12411833 - PROTOP_B DNA P -297 856 411 9 711 871 89 0 0 chrUextra 16592923 16593058 -12411598 - ARS406_DM Unknown Unknown -218 135 1 9 711 2981 168 15 7 chrUextra 16592952 16593628 -12411028 + SAR_DM Satellite Satellite 180 860 -612 9 711 900 0 0 0 chrUextra 16594333 16594433 -12410223 + (CACAA)n Simple_repeat Simple_repeat 1 100 0 9 711 3074 113 37 95 chrUextra 16594533 16595238 -12409418 + PROTOP_B DNA P 412 1075 -78 9 711 3198 162 13 13 chrUextra 16595344 16596038 -12408618 - SAR_DM Satellite Satellite -425 1047 354 9 711 5969 3 0 0 chrUextra 16596143 16596848 -12407808 + STALKER4_I LTR Gypsy 4799 5503 -1027 9 711 5914 0 1 0 chrUextra 16596948 16597653 -12407003 + ROO_I LTR Pao 4641 5346 -2910 9 711 292 291 0 0 chrUextra 16598268 16598354 -12406302 - DMRT1C LINE R1 -1183 4260 4175 9 711 328 147 67 0 chrUextra 16598383 16598458 -12406198 + DNAREP1_DM LINE Penelope 182 261 -333 9 711 3036 185 11 6 chrUextra 16598558 16599261 -12405395 - SAR_DM Satellite Satellite -539 933 227 9 711 3161 168 11 10 chrUextra 16599363 16600068 -12404588 + SAR_DM Satellite Satellite 371 1076 -396 9 711 1402 132 57 3 chrUextra 16600550 16600832 -12403824 + DNAREP1_DM LINE Penelope 1 297 -297 9 711 6045 3 0 0 chrUextra 16602583 16603288 -12401368 + R1_DM LINE R1 2757 3461 -1895 9 711 32 0 0 0 chrUextra 16603413 16603445 -12401211 + AT_rich Low_complexity Low_complexity 1 32 0 9 711 28 48 0 0 chrUextra 16603773 16603815 -12400841 + AT_rich Low_complexity Low_complexity 1 42 0 9 711 6185 0 1 0 chrUextra 16604193 16604898 -12399758 - GTWIN_I LTR Gypsy -977 5444 4739 9 711 2275 148 54 10 chrUextra 16604999 16605568 -12399088 + DM176_I LTR Gypsy 4034 4672 -1748 9 711 444 141 67 0 chrUextra 16605568 16605703 -12398953 + CT-rich Low_complexity Low_complexity 1 144 0 9 711 5676 11 38 0 chrUextra 16605803 16606508 -12398148 - DOC2_DM LINE Jockey -1581 3212 2481 9 711 692 12 0 0 chrUextra 16606608 16606689 -12397967 + R1_DM LINE R1 5276 5356 0 9 711 1208 60 6 0 chrUextra 16606722 16606889 -12397767 + R1_DM LINE R1 1 168 -5188 9 711 3293 31 0 2 chrUextra 16606887 16607312 -12397344 + R1_DM LINE R1 638 1061 -4295 9 711 4475 2 2 2 chrUextra 16607413 16607957 -12396699 - ROO_I LTR Pao -6979 1277 734 9 711 552 130 0 0 chrUextra 16607958 16608050 -12396606 + (CTG)n Simple_repeat Simple_repeat 1 92 0 9 711 573 0 0 0 chrUextra 16608050 16608118 -12396538 - ROO_I LTR Pao -7616 640 573 9 711 1434 12 6 0 chrUextra 16608218 16608388 -12396268 + R1_DM LINE R1 5186 5356 0 9 711 3655 70 4 4 chrUextra 16608420 16608923 -12395733 + R1_DM LINE R1 1 503 -4853 9 711 5814 1 0 0 chrUextra 16609023 16609687 -12394969 + LSU-rRNA_Dme rRNA rRNA 1993 2656 -1244 9 711 340 0 0 23 chrUextra 16609685 16609728 -12394928 + R1_DM LINE R1 5294 5335 -21 9 711 5768 7 0 0 chrUextra 16609828 16610533 -12394123 + QUASIMODO_I LTR Gypsy 3472 4176 -1884 9 711 639 177 0 0 chrUextra 16610633 16610763 -12393893 - ARS406_DM Unknown Unknown -223 130 1 9 711 2893 173 12 15 chrUextra 16610666 16611335 -12393321 + SAR_DM Satellite Satellite 191 857 -615 9 711 236 86 0 0 chrUextra 16612243 16612278 -12392378 - PROTOP_B DNA P -1118 35 1 9 711 757 170 6 25 chrUextra 16613124 16613281 -12391375 + HETRP_DM Satellite Satellite 1516 1669 -203 9 711 276 185 250 42 chrUextra 16613439 16613535 -12391121 + HETRP_DM Satellite Satellite 1519 1634 -238 9 711 787 170 6 19 chrUextra 16613583 16613739 -12390917 + HETRP_DM Satellite Satellite 1516 1669 -203 9 711 5936 1 0 3 chrUextra 16613853 16614556 -12390100 - ROO_I LTR Pao -2057 6199 5499 9 711 2604 23 0 6 chrUextra 16614658 16615006 -12389650 + ROO_I LTR Pao 7911 8256 0 9 711 3005 17 3 0 chrUextra 16615006 16615363 -12389293 + ROO_LTR LTR Pao 1 358 -70 9 711 4465 139 0 0 chrUextra 16615463 16616168 -12388488 + HMSBEAGLE_I LTR Gypsy 3282 3986 -2543 9 711 1228 75 0 0 chrUextra 16616268 16616467 -12388189 + S_DM DNA Tc1 1538 1736 0 9 711 937 52 7 0 chrUextra 16616467 16616595 -12388061 + CIRCE LINE Composite 4493 4621 -1735 9 711 1121 49 0 0 chrUextra 16616591 16616734 -12387922 + CIRCE LINE Composite 4838 4980 -1376 9 711 3223 37 48 2 chrUextra 16617073 16617510 -12387146 - Invader2_I LTR Gypsy -1462 3130 2674 9 711 2261 15 0 0 chrUextra 16617511 16617778 -12386878 - DIVER2_LTR LTR Pao -8 377 111 9 711 5023 27 7 50 chrUextra 16617878 16618583 -12386073 + BATUMI_I LTR Pao 2061 2735 -5228 9 711 2361 0 3 3 chrUextra 16618683 16618967 -12385689 - DMRT1B LINE R1 -4339 844 561 9 711 3420 26 2 0 chrUextra 16618971 16619388 -12385268 + R1_DM LINE R1 4583 5000 -356 9 711 5450 16 51 0 chrUextra 16619488 16620191 -12384465 - FW_DM LINE Jockey -375 4317 3579 9 711 2784 179 30 25 chrUextra 16620294 16620997 -12383659 + SAR_DM Satellite Satellite 1 706 -208 9 711 24 0 0 0 chrUextra 16621223 16621247 -12383409 + AT_rich Low_complexity Low_complexity 1 24 0 9 711 291 232 0 0 chrUextra 16621477 16621546 -12383110 - BS2 LINE Jockey -507 4214 4146 9 711 6061 0 0 3 chrUextra 16621903 16622608 -12382048 + FW_DM LINE Jockey 1732 2434 -2258 9 711 2885 171 14 26 chrUextra 16622716 16623413 -12381243 - SAR_DM Satellite Satellite -354 1118 430 9 711 2836 106 40 6 chrUextra 16623514 16623662 -12380994 - R1_DM LINE R1 -4293 1063 897 9 711 243 88 0 0 chrUextra 16623662 16623696 -12380960 + (CGG)n Simple_repeat Simple_repeat 1 34 0 9 711 2836 106 40 6 chrUextra 16623696 16624021 -12380635 - R1_DM LINE R1 -4460 896 574 9 711 970 108 29 29 chrUextra 16624022 16624194 -12380462 - R1_DM LINE R1 -5184 172 1 9 711 339 328 29 30 chrUextra 16624447 16624838 -12379818 + Gypsy3_I LTR Gypsy 1218 1784 -5228 9 711 4613 0 0 0 chrUextra 16625927 16626452 -12378204 + R2_DM LINE R2 3083 3607 0 9 711 1524 11 0 0 chrUextra 16626455 16626631 -12378025 + LSU-rRNA_Dme rRNA rRNA 2578 2753 -1147 9 711 888 0 0 0 chrUextra 16626731 16626832 -12377824 + R1_DM LINE R1 5256 5356 0 9 711 5223 2 0 3 chrUextra 16626830 16627435 -12377221 + LSU-rRNA_Dme rRNA rRNA 2640 3242 -658 9 711 3158 171 9 9 chrUextra 16627555 16628238 -12376418 + SAR_DM Satellite Satellite 326 1008 -464 9 711 246 150 0 0 chrUextra 16628414 16628454 -12376202 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 711 22 56 0 0 chrUextra 16628459 16628495 -12376161 + AT_rich Low_complexity Low_complexity 1 36 0 9 711 4133 0 4 0 chrUextra 16628567 16629043 -12375613 - LSU-rRNA_Dme rRNA rRNA 0 3900 3423 9 711 784 288 64 46 chrUextra 16629144 16629807 -12374849 - TABOR_I LTR Gypsy -3508 3389 2344 9 711 327 167 59 42 chrUextra 16629949 16630068 -12374588 + NTS_DM Other Other 120 240 0 9 711 280 104 21 0 chrUextra 16630068 16630116 -12374540 + NTS_DM Other Other 1 49 -191 9 711 827 144 7 0 chrUextra 16630206 16630359 -12374297 + NTS_DM Other Other 1 154 -86 9 711 659 148 44 28 chrUextra 16630373 16630553 -12374103 + NTS_DM Other Other 58 240 0 9 711 243 125 20 20 chrUextra 16630553 16630602 -12374054 + NTS_DM Other Other 1 49 -191 9 711 2669 176 16 27 chrUextra 16630759 16631430 -12373226 + SAR_DM Satellite Satellite 456 1119 -353 9 711 424 176 9 27 chrUextra 16631344 16631455 -12373201 - XDMR_DM Unknown Unknown 0 360 252 9 711 975 9 0 0 chrUextra 16632147 16632259 -12372397 + (TTGTG)n Simple_repeat Simple_repeat 2 113 0 9 711 1177 66 11 32 chrUextra 16632359 16632548 -12372108 + BATUMI_I LTR Pao 7100 7284 -679 9 711 2638 93 91 33 chrUextra 16632548 16633062 -12371594 + BATUMI_I LTR Pao 1 544 -7419 9 711 3106 155 20 18 chrUextra 16633163 16633847 -12370809 - SAR_DM Satellite Satellite -466 1006 321 9 711 2810 191 19 25 chrUextra 16633969 16634671 -12369985 + SAR_DM Satellite Satellite 1 697 -208 9 711 3011 182 7 10 chrUextra 16634775 16635474 -12369182 - SAR_DM Satellite Satellite -581 891 195 9 711 1350 0 0 0 chrUextra 16636379 16636540 -12368116 - NTS_DM Other Other -79 161 1 9 711 1850 4 17 13 chrUextra 16636540 16636779 -12367877 - NTS_DM Other Other 0 240 1 9 711 1800 13 17 13 chrUextra 16636779 16637018 -12367638 - NTS_DM Other Other 0 240 1 9 711 733 90 25 0 chrUextra 16637183 16637305 -12367351 - ARS406_DM Unknown Unknown -228 125 1 9 711 2735 189 13 9 chrUextra 16637215 16637887 -12366769 + SAR_DM Satellite Satellite 195 869 -603 9 711 2942 0 0 0 chrUextra 16637987 16638326 -12366330 + Copia_I LTR Copia 4255 4593 0 9 711 2219 4 4 4 chrUextra 16638326 16638602 -12366054 + Copia_LTR LTR Copia 1 276 0 9 711 524 23 33 44 chrUextra 16638602 16638691 -12365965 - NTS_DM Other Other -16 224 137 9 711 5950 3 4 3 chrUextra 16638791 16639495 -12365161 - LSU-rRNA_Dme rRNA rRNA -2152 1748 1044 9 711 2491 87 20 24 chrUextra 16639600 16640299 -12364357 + DMSAT6 Satellite Satellite 1 695 -155 9 711 1301 0 0 0 chrUextra 16641203 16641353 -12363303 - LSU-rRNA_Dme rRNA rRNA -3750 150 1 9 711 21 95 0 0 chrUextra 16641365 16641428 -12363228 + AT_rich Low_complexity Low_complexity 1 63 0 9 711 34 24 0 0 chrUextra 16641641 16641682 -12362974 + AT_rich Low_complexity Low_complexity 1 41 0 9 711 3727 0 0 0 chrUextra 16642282 16642711 -12361945 + FW_DM LINE Jockey 560 988 -3704 9 711 1850 4 17 13 chrUextra 16642814 16643053 -12361603 - NTS_DM Other Other 0 240 1 9 711 1850 4 17 13 chrUextra 16643053 16643292 -12361364 - NTS_DM Other Other 0 240 1 9 711 1374 30 20 20 chrUextra 16643292 16643495 -12361161 - NTS_DM Other Other 0 240 38 9 711 5943 1 0 0 chrUextra 16643615 16644319 -12360337 + DM176_I LTR Gypsy 2016 2719 -3701 9 711 493 226 0 0 chrUextra 16644419 16644525 -12360131 + Copia2_I LTR Copia 1002 1107 -3055 9 711 720 51 0 0 chrUextra 16644560 16644658 -12359998 + DOC3_DM LINE Jockey 4614 4711 -29 9 711 3587 24 69 2 chrUextra 16644657 16645123 -12359533 + PROTOP DNA P 49 545 -3935 9 711 6151 0 0 1 chrUextra 16645223 16645927 -12358729 - LSU-rRNA_Dme rRNA rRNA -741 3159 2457 9 88 3154 184 6 6 chrUextra 16646027 16646731 -12357925 - SAR_DM Satellite Satellite -539 933 230 9 712 918 0 0 0 chrUextra 16646831 16646933 -12357723 + (CTATT)n Simple_repeat Simple_repeat 2 103 0 9 712 6000 6 0 0 chrUextra 16647644 16648339 -12356317 + LSU-rRNA_Dme rRNA rRNA 1788 2482 -1418 9 712 235 175 0 0 chrUextra 16648468 16648508 -12356148 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 712 238 150 0 0 chrUextra 16648560 16648600 -12356056 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 712 226 175 0 0 chrUextra 16648652 16648692 -12355964 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 712 246 150 0 0 chrUextra 16648744 16648784 -12355872 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 712 235 175 0 0 chrUextra 16648836 16648876 -12355780 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 712 238 150 0 0 chrUextra 16648928 16648968 -12355688 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 712 5296 35 0 3 chrUextra 16649291 16649947 -12354709 - BATUMI_I LTR Pao -1543 6420 5767 9 712 21 89 0 0 chrUextra 16650371 16650427 -12354229 + AT_rich Low_complexity Low_complexity 1 56 0 9 712 2638 3 3 0 chrUextra 16650446 16650751 -12353905 - SSU-rRNA_Dme rRNA rRNA 0 1995 1690 9 712 6109 1 0 0 chrUextra 16651655 16652359 -12352297 - FW_DM LINE Jockey -328 4364 3661 9 712 5450 33 14 0 chrUextra 16652459 16653163 -12351493 + MDG1_I LTR Gypsy 5016 5729 -867 9 712 2929 186 7 19 chrUextra 16653264 16653967 -12350689 - SAR_DM Satellite Satellite -366 1106 412 9 712 6030 3 1 3 chrUextra 16654067 16654771 -12349885 + SSU-rRNA_Dme rRNA rRNA 779 1481 -514 9 712 1417 39 34 0 chrUextra 16654871 16655079 -12349577 - PROTOP DNA P -2604 1876 1662 9 712 3888 25 2 2 chrUextra 16655088 16655575 -12349081 - PROTOP DNA P -3893 587 101 9 712 5913 8 3 1 chrUextra 16655675 16656379 -12348277 + Invader4_I LTR Gypsy 516 1220 -1193 9 712 562 14 13 39 chrUextra 16656480 16656557 -12348099 - NTS_DM Other Other -141 99 25 9 712 22 56 0 0 chrUextra 16656583 16656619 -12348037 + AT_rich Low_complexity Low_complexity 1 36 0 9 712 255 125 0 0 chrUextra 16656632 16656672 -12347984 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 712 246 150 0 0 chrUextra 16656808 16656848 -12347808 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 712 246 150 0 0 chrUextra 16656900 16656940 -12347716 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 712 22 56 0 0 chrUextra 16656945 16656981 -12347675 + AT_rich Low_complexity Low_complexity 1 36 0 9 712 1142 0 0 0 chrUextra 16657053 16657183 -12347473 - LSU-rRNA_Dme rRNA rRNA 0 3900 3771 9 712 5788 19 1 7 chrUextra 16657283 16657987 -12346669 + BATUMI_I LTR Pao 5693 6392 -1571 9 712 2927 172 11 26 chrUextra 16658894 16659593 -12345063 - SAR_DM Satellite Satellite -359 1113 425 9 712 5812 11 0 0 chrUextra 16660499 16661203 -12343453 - IDEFIX_I LTR Gypsy -4308 1320 617 9 712 5960 3 4 3 chrUextra 16661303 16662007 -12342649 - LSU-rRNA_Dme rRNA rRNA -2152 1748 1044 9 712 34 24 0 0 chrUextra 16662147 16662188 -12342468 + AT_rich Low_complexity Low_complexity 1 41 0 9 712 2278 106 8 63 chrUextra 16662911 16663615 -12341041 - DMSAT6 Satellite Satellite -75 665 1 9 712 1216 198 140 32 chrUextra 16663723 16664252 -12340404 + Gypsy12_LTR LTR Gypsy 1164 1727 -553 9 712 860 50 33 60 chrUextra 16664266 16664416 -12340240 + Gypsy12_I LTR Gypsy 1 146 -5400 9 712 1145 23 23 23 chrUextra 16664519 16664694 -12339962 + NTS_DM Other Other 66 240 0 9 712 1734 21 17 17 chrUextra 16664694 16664934 -12339722 + NTS_DM Other Other 1 240 0 9 712 1756 17 17 17 chrUextra 16664934 16665174 -12339482 + NTS_DM Other Other 1 240 0 9 712 382 41 0 0 chrUextra 16665174 16665223 -12339433 + NTS_DM Other Other 1 49 -191 9 712 2445 173 47 17 chrUextra 16665324 16666027 -12338629 - SAR_DM Satellite Satellite -620 724 1 9 712 6553 0 0 0 chrUextra 16666931 16667635 -12337021 + MDG3_I LTR Gypsy 425 1128 -3858 9 712 4193 43 51 10 chrUextra 16667735 16668439 -12336217 + R1_DM LINE R1 597 1424 -3932 9 712 5452 44 21 0 chrUextra 16668543 16669243 -12335413 + R1_DM LINE R1 441 1155 -4201 9 712 1833 9 18 13 chrUextra 16669343 16669568 -12335088 + NTS_DM Other Other 15 240 0 9 712 1965 4 17 17 chrUextra 16669568 16669808 -12334848 + NTS_DM Other Other 1 240 0 9 712 1901 4 29 21 chrUextra 16669808 16670046 -12334610 + NTS_DM Other Other 1 240 0 9 712 4589 18 0 0 chrUextra 16670147 16670661 -12333995 - R1_DM LINE R1 -817 4539 4026 9 712 1496 27 16 27 chrUextra 16670663 16670851 -12333805 - R1_DM LINE R1 -1679 3677 3492 9 712 2537 34 74 6 chrUextra 16670951 16671198 -12333458 - DMRT1B LINE R1 -4771 412 163 9 712 180 0 0 0 chrUextra 16671198 16671218 -12333438 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 9 712 2537 34 74 6 chrUextra 16671218 16671296 -12333360 - DMRT1B LINE R1 -5021 162 66 9 712 1207 126 6 0 chrUextra 16671294 16671476 -12333180 - DMRT1C LINE R1 -4786 657 475 9 712 6494 0 1 3 chrUextra 16671755 16672459 -12332197 + SSU-rRNA_Dme rRNA rRNA 501 1203 -792 9 712 4118 19 0 2 chrUextra 16672559 16673024 -12331632 - Gypsy4_I LTR Gypsy -2625 3663 3200 9 712 2265 16 12 0 chrUextra 16673009 16673263 -12331393 - Gypsy4_I LTR Gypsy -3599 2689 2433 9 712 936 9 0 27 chrUextra 16673375 16673487 -12331169 + NTS_DM Other Other 25 133 -107 9 712 1558 15 20 20 chrUextra 16673487 16673690 -12330966 + NTS_DM Other Other 38 240 0 9 712 902 28 17 22 chrUextra 16673690 16673868 -12330788 + NTS_DM Other Other 1 240 0 9 712 1670 20 0 5 chrUextra 16673868 16674067 -12330589 + NTS_DM Other Other 1 198 -42 9 712 4500 95 109 0 chrUextra 16674167 16674871 -12329785 + TART LINE telomeric 700 1480 -12997 9 712 1216 68 0 0 chrUextra 16674971 16675134 -12329522 - ARS406_DM Unknown Unknown -190 163 1 9 712 2167 175 40 10 chrUextra 16675134 16675675 -12328981 + SAR_DM Satellite Satellite 1 725 -677 9 712 6341 3 0 1 chrUextra 16675775 16676479 -12328177 - DMRT1B LINE R1 -628 4555 3853 9 712 2425 0 0 0 chrUextra 16676579 16676839 -12327817 + GTWIN_I LTR Gypsy 6162 6421 0 9 712 4162 0 0 0 chrUextra 16676839 16677283 -12327373 + GTWIN_LTR LTR Gypsy 1 444 -51 9 712 32 0 0 0 chrUextra 16677392 16677424 -12327232 + AT_rich Low_complexity Low_complexity 1 32 0 9 712 28 48 0 0 chrUextra 16677752 16677794 -12326862 + AT_rich Low_complexity Low_complexity 1 42 0 9 712 5955 33 0 0 chrUextra 16678187 16678891 -12325765 + MDG1_I LTR Gypsy 1925 2628 -3968 9 712 1395 0 0 0 chrUextra 16678991 16679146 -12325510 + (GAGAA)n Simple_repeat Simple_repeat 4 158 0 9 712 3972 0 0 0 chrUextra 16679795 16680219 -12324437 + LSU-rRNA_Dme rRNA rRNA 2230 2653 -1247 9 712 256 62 0 0 chrUextra 16680212 16680244 -12324412 + LSU-rRNA_Dme rRNA rRNA 2601 2632 -1268 9 712 2309 0 8 0 chrUextra 16680244 16680499 -12324157 + R1_DM LINE R1 1 257 -5099 9 712 2819 174 17 10 chrUextra 16680599 16681303 -12323353 - SAR_DM Satellite Satellite -647 708 1 9 712 26 30 0 0 chrUextra 16681422 16681455 -12323201 + AT_rich Low_complexity Low_complexity 1 33 0 9 712 2337 44 0 0 chrUextra 16681834 16682107 -12322549 - PROTOP DNA P 0 4480 4208 9 712 956 70 0 0 chrUextra 16682207 16682336 -12322320 - ARS406_DM Unknown Unknown -224 129 1 9 712 3199 178 12 10 chrUextra 16682230 16682911 -12321745 + SAR_DM Satellite Satellite 180 861 -611 9 712 3913 48 111 20 chrUextra 16683022 16683715 -12320941 + BATUMI_I LTR Pao 1128 1883 -6080 9 712 2045 45 4 0 chrUextra 16683815 16684057 -12320599 + PROTOP DNA P 4238 4480 0 9 712 26 30 0 0 chrUextra 16684436 16684469 -12320187 + AT_rich Low_complexity Low_complexity 1 33 0 9 712 6189 20 1 0 chrUextra 16684619 16685323 -12319333 + R1_DM LINE R1 1986 2690 -2666 9 712 721 334 23 23 chrUextra 16685550 16685991 -12318665 + Gypsy6_I LTR Gypsy 2765 3205 -3807 9 712 935 51 150 19 chrUextra 16685967 16686127 -12318529 + TLD2 Unknown Unknown 1 181 -37 9 712 3477 176 7 8 chrUextra 16686227 16686931 -12317725 - SAR_DM Satellite Satellite -398 1074 372 9 712 3961 0 7 2 chrUextra 16687031 16687467 -12317189 + R2_DM LINE R2 3170 3607 0 9 712 2479 15 0 0 chrUextra 16687463 16687735 -12316921 + LSU-rRNA_Dme rRNA rRNA 2578 2849 -1051 9 712 6326 13 0 0 chrUextra 16687838 16688539 -12316117 + DOC2_DM LINE Jockey 3935 4635 -158 9 712 1316 105 0 5 chrUextra 16688639 16688831 -12315825 + MDG1_LTR LTR Gypsy 222 412 -30 9 712 2739 36 29 115 chrUextra 16688833 16689278 -12315378 + DMCR1A LINE CR1 1 407 -4063 9 712 577 15 0 0 chrUextra 16689276 16689343 -12315313 + DMCR1A LINE CR1 800 866 -3604 9 712 284 200 38 0 chrUextra 16689470 16689550 -12315106 + Gypsy12A_LTR LTR Gypsy 1426 1508 -828 9 712 389 211 41 34 chrUextra 16689604 16689751 -12314905 + Gypsy12A_LTR LTR Gypsy 1580 1727 -553 9 712 2722 60 16 31 chrUextra 16689765 16690147 -12314509 + Gypsy12_I LTR Gypsy 1 376 -5170 9 712 898 9 9 27 chrUextra 16690253 16690364 -12314292 + NTS_DM Other Other 25 133 -107 9 712 1350 18 0 6 chrUextra 16690364 16690529 -12314127 + NTS_DM Other Other 38 201 -39 9 712 936 9 0 27 chrUextra 16690581 16690693 -12313963 + NTS_DM Other Other 25 133 -107 9 712 1350 18 0 6 chrUextra 16690693 16690858 -12313798 + NTS_DM Other Other 38 201 -39 9 712 21 57 0 0 chrUextra 16690858 16690893 -12313763 + AT_rich Low_complexity Low_complexity 1 35 0 9 712 226 0 0 94 chrUextra 16690919 16690951 -12313705 + NTS_DM Other Other 25 53 -187 9 712 6077 1 19 1 chrUextra 16691051 16691755 -12312901 - ROO_I LTR Pao -7140 1116 401 9 712 6412 4 0 0 chrUextra 16691855 16692559 -12312097 + DOC LINE Jockey 847 1550 -3175 9 712 713 191 13 26 chrUextra 16692768 16692924 -12311732 + HETRP_DM Satellite Satellite 1529 1682 -190 9 712 721 194 11 68 chrUextra 16693054 16693231 -12311425 + HETRP_DM Satellite Satellite 1518 1684 -188 9 712 2301 29 44 0 chrUextra 16693463 16693735 -12310921 + Invader3_LTR LTR Gypsy 15 298 0 9 712 2440 39 391 7 chrUextra 16693735 16694167 -12310489 + IVK_DM LINE I 1626 2223 -3179 9 712 5441 42 35 1 chrUextra 16694287 16694971 -12309685 + R1_DM LINE R1 633 1339 -4017 9 712 202 265 0 0 chrUextra 16695103 16695152 -12309504 + (CTG)n Simple_repeat Simple_repeat 2 50 0 9 712 6145 23 0 0 chrUextra 16695875 16696579 -12308077 + R1_DM LINE R1 2366 3069 -2287 9 712 5397 16 25 25 chrUextra 16696679 16697329 -12307327 - ACCORD2_I LTR Gypsy -6562 650 1 9 712 449 19 0 0 chrUextra 16697329 16697382 -12307274 - ACCORD2_LTR LTR Gypsy 0 215 163 9 712 1480 6 0 0 chrUextra 16697483 16697647 -12307009 - DM176_I LTR Gypsy -846 5574 5411 9 712 4936 2 0 0 chrUextra 16697645 16698187 -12306469 - DM176_I LTR Gypsy -2772 3648 3107 9 712 5120 94 11 7 chrUextra 16698287 16698991 -12305665 - Gypsy12_I LTR Gypsy -4059 1487 781 9 712 196 0 0 157 chrUextra 16699092 16699239 -12305417 + CT-rich Low_complexity Low_complexity 21 144 0 9 712 5152 35 3 57 chrUextra 16699895 16700599 -12304057 - BATUMI_I LTR Pao -4746 3217 2552 9 712 6497 0 1 3 chrUextra 16700699 16701403 -12303253 - SSU-rRNA_Dme rRNA rRNA 0 1995 1293 9 712 6208 13 0 1 chrUextra 16701503 16702207 -12302449 + STALKER4_I LTR Gypsy 1425 2127 -4403 9 712 3235 165 21 24 chrUextra 16702311 16703011 -12301645 - SAR_DM Satellite Satellite -478 994 297 9 712 5474 2 2 2 chrUextra 16703111 16703703 -12300953 - LSU-rRNA_Dme rRNA rRNA -669 3231 2640 9 712 1015 9 0 9 chrUextra 16703701 16703815 -12300841 - R1_DM LINE R1 0 5356 5244 9 712 4978 21 3 12 chrUextra 16703915 16704619 -12300037 + DOC LINE Jockey 1953 2730 -1995 9 712 3102 176 21 27 chrUextra 16704721 16705423 -12299233 - SAR_DM Satellite Satellite -318 1154 457 9 712 6236 6 0 1 chrUextra 16705523 16706227 -12298429 + IDEFIX_I LTR Gypsy 158 860 -4768 9 712 2983 172 16 48 chrUextra 16706329 16707018 -12297638 + SAR_DM Satellite Satellite 452 1118 -354 9 712 561 154 0 0 chrUextra 16707133 16707276 -12297380 + (TG)n Simple_repeat Simple_repeat 2 144 0 9 712 3344 0 0 0 chrUextra 16707282 16707641 -12297015 - DMRT1B LINE R1 0 5183 4825 9 712 1774 0 0 0 chrUextra 16707641 16707835 -12296821 - TABOR_LTR LTR Gypsy 0 506 313 9 712 2983 129 41 95 chrUextra 16707935 16708639 -12296017 + PROTOP_B DNA P 319 984 -169 9 712 5690 33 6 16 chrUextra 16708739 16709443 -12295213 + G2_DM LINE Jockey 2053 2749 -353 9 712 4538 101 80 0 chrUextra 16709543 16710247 -12294409 - TART LINE telomeric -13123 1354 595 9 712 268 196 0 19 chrUextra 16710396 16710448 -12294208 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 712 4673 2 2 0 chrUextra 16710549 16711051 -12293605 - LSU-rRNA_Dme rRNA rRNA 0 3900 3398 9 712 4269 40 0 0 chrUextra 16711151 16711652 -12293004 - FW_DM LINE Jockey -4191 501 1 9 712 1597 46 0 5 chrUextra 16711660 16711855 -12292801 + R1_DM LINE R1 1377 1570 -3786 9 712 6307 7 1 0 chrUextra 16711955 16712659 -12291997 + STALKER4_I LTR Gypsy 2032 2736 -3794 9 712 27 29 0 0 chrUextra 16712949 16712983 -12291673 + AT_rich Low_complexity Low_complexity 1 34 0 9 712 265 91 0 0 chrUextra 16713222 16713255 -12291401 + Baggins1 LINE LOA 4727 4759 -694 9 712 769 103 241 0 chrUextra 16713260 16713405 -12291251 + FB4_DM DNA Tc1 3908 4087 -2 9 712 6523 0 0 0 chrUextra 16713563 16714266 -12290390 - Gypsy3_I LTR Gypsy -4396 1781 1079 9 712 6311 6 1 0 chrUextra 16714367 16715071 -12289585 + STALKER4_I LTR Gypsy 1882 2586 -3944 9 712 6045 24 3 1 chrUextra 16715171 16715875 -12288781 - R1_DM LINE R1 -1513 3843 3139 9 712 6262 13 7 0 chrUextra 16715975 16716679 -12287977 - R1_DM LINE R1 -690 4666 3958 9 712 21 89 0 0 chrUextra 16717237 16717293 -12287363 + AT_rich Low_complexity Low_complexity 1 56 0 9 712 1580 6 0 0 chrUextra 16717312 16717483 -12287173 - SSU-rRNA_Dme rRNA rRNA 0 1995 1825 9 712 3263 171 23 14 chrUextra 16717583 16718287 -12286369 - SAR_DM Satellite Satellite -466 1006 297 9 712 865 83 0 0 chrUextra 16718387 16718507 -12286149 - ARS406_DM Unknown Unknown -233 120 1 9 712 3234 177 10 9 chrUextra 16718401 16719091 -12285565 + SAR_DM Satellite Satellite 180 870 -602 9 712 502 0 135 3 chrUextra 16719195 16719507 -12285149 + (TA)n Simple_repeat Simple_repeat 1 353 0 9 712 3634 164 9 9 chrUextra 16719995 16720691 -12283965 + SAR_DM Satellite Satellite 381 1076 -396 9 712 6451 1 0 0 chrUextra 16720799 16721503 -12283153 - ROO_I LTR Pao -3442 4814 4111 9 712 6372 11 1 0 chrUextra 16721603 16722307 -12282349 - BATUMI_I LTR Pao -2319 5644 4940 9 712 3328 171 12 12 chrUextra 16722423 16723111 -12281545 + SAR_DM Satellite Satellite 326 1013 -459 9 712 5549 61 16 3 chrUextra 16723211 16723914 -12280742 - R1_DM LINE R1 -4599 757 46 9 712 1605 30 0 39 chrUextra 16724015 16724222 -12280434 - NINJA_LTR LTR Pao -118 199 1 9 712 4113 36 0 2 chrUextra 16724222 16724719 -12279937 - NINJA_I LTR Pao 0 6011 5516 9 712 6330 3 1 1 chrUextra 16724819 16725523 -12279133 - R1_DM LINE R1 -1459 3897 3194 9 712 5416 8 0 0 chrUextra 16725623 16726225 -12278431 - FW_DM LINE Jockey -2820 1872 1271 9 712 933 19 0 0 chrUextra 16726222 16726327 -12278329 - FW_DM LINE Jockey -3658 1034 930 9 712 4326 97 77 33 chrUextra 16726427 16727129 -12277527 - Gypsy12_I LTR Gypsy -4635 911 179 9 712 675 0 0 0 chrUextra 16727233 16727306 -12277350 - NTS_DM Other Other -130 110 38 9 712 918 18 0 27 chrUextra 16727306 16727418 -12277238 - NTS_DM Other Other -107 133 25 9 712 21 57 0 0 chrUextra 16727444 16727479 -12277177 + AT_rich Low_complexity Low_complexity 1 35 0 9 712 1350 18 0 6 chrUextra 16727479 16727644 -12277012 - NTS_DM Other Other -39 201 38 9 712 936 9 0 27 chrUextra 16727644 16727756 -12276900 - NTS_DM Other Other -107 133 25 9 712 913 24 8 8 chrUextra 16727808 16727935 -12276721 - NTS_DM Other Other -39 201 75 9 712 4074 71 35 7 chrUextra 16728035 16728603 -12276053 - Gypsy7_I LTR Gypsy -3061 1923 1340 9 712 1103 76 0 0 chrUextra 16728594 16728739 -12275917 - Gypsy7_I LTR Gypsy -3755 1229 1085 9 712 5210 43 45 20 chrUextra 16728839 16729543 -12275113 + R1_DM LINE R1 333 1054 -4302 9 712 3651 0 0 0 chrUextra 16729643 16730032 -12274624 + LSU-rRNA_Dme rRNA rRNA 3512 3900 0 9 712 26 0 0 0 chrUextra 16730104 16730130 -12274526 + AT_rich Low_complexity Low_complexity 1 26 0 9 712 268 196 0 19 chrUextra 16730132 16730184 -12274472 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 712 268 196 0 19 chrUextra 16730224 16730276 -12274380 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 712 2517 0 0 4 chrUextra 16730472 16730748 -12273908 + BURDOCK_LTR LTR Gypsy 1 275 0 9 712 3515 7 0 0 chrUextra 16730748 16731151 -12273505 + BURDOCK_I LTR Gypsy 1 403 -5457 9 712 2014 5 5 0 chrUextra 16731251 16731472 -12273184 - SSU-rRNA_Dme rRNA rRNA -1773 222 1 9 712 32 0 0 0 chrUextra 16731604 16731636 -12273020 + AT_rich Low_complexity Low_complexity 1 32 0 9 712 1595 0 6 0 chrUextra 16732055 16732230 -12272426 - R1_DM LINE R1 -5180 176 1 9 712 4889 4 0 0 chrUextra 16732230 16732759 -12271897 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2104 9 712 1084 8 0 0 chrUextra 16732859 16732976 -12271680 + R1_DM LINE R1 5240 5356 0 9 712 5476 2 0 0 chrUextra 16732978 16733563 -12271093 + LSU-rRNA_Dme rRNA rRNA 2640 3224 -676 9 712 6295 16 10 0 chrUextra 16733663 16734367 -12270289 - LSU-rRNA_Dme rRNA rRNA -163 3737 3027 9 712 2351 11 0 0 chrUextra 16734468 16734732 -12269924 - R1_DM LINE R1 -3092 2264 2001 9 712 3436 54 26 0 chrUextra 16734744 16735171 -12269485 - R1_DM LINE R1 -3739 1617 1180 9 712 2690 98 44 13 chrUextra 16735271 16735972 -12268684 + DMSAT6 Satellite Satellite 1 723 -267 9 712 988 332 20 22 chrUextra 16736082 16736680 -12267976 + MICROPIA_I LTR Gypsy 118 710 -3389 9 712 3654 158 17 8 chrUextra 16736880 16737583 -12267073 - SAR_DM Satellite Satellite -432 1040 332 9 712 6292 0 1 0 chrUextra 16737683 16738387 -12266269 + STALKER4_I LTR Gypsy 858 1562 -4968 9 712 4878 81 0 3 chrUextra 16738487 16739185 -12265471 + BATUMI_I LTR Pao 5858 6796 -1118 9 712 554 0 16 0 chrUextra 16739291 16739353 -12265303 - NTS_DM Other Other -177 63 1 9 712 2006 0 17 13 chrUextra 16739353 16739592 -12265064 - NTS_DM Other Other 0 240 1 9 712 1956 13 17 13 chrUextra 16739592 16739831 -12264825 - NTS_DM Other Other 0 240 1 9 712 1134 25 24 24 chrUextra 16739831 16739995 -12264661 - NTS_DM Other Other 0 240 77 9 712 3360 174 9 7 chrUextra 16740903 16741580 -12263076 + SAR_DM Satellite Satellite 399 1076 -396 9 712 238 127 17 52 chrUextra 16741545 16741603 -12263053 - XDMR_DM Unknown Unknown 0 360 305 9 712 5767 32 4 13 chrUextra 16741703 16742407 -12262249 - BATUMI_I LTR Pao -5730 2233 1536 9 712 6116 21 7 4 chrUextra 16742508 16743211 -12261445 + CIRCE LINE Composite 3169 3873 -2483 9 712 3238 11 0 5 chrUextra 16744126 16744495 -12260161 + ROVER-LTR_DM LTR Gypsy 1 367 0 9 712 2806 3 3 6 chrUextra 16744495 16744819 -12259837 + ROVER-I_DM LTR Gypsy 1 323 -6261 9 712 3680 168 7 6 chrUextra 16744919 16745621 -12259035 - SAR_DM Satellite Satellite -444 1028 326 9 712 3380 170 14 14 chrUextra 16745723 16746427 -12258229 + SAR_DM Satellite Satellite 208 911 -561 9 712 868 117 11 16 chrUextra 16746527 16746890 -12257766 - RSP Satellite Satellite -31 361 1 9 712 837 143 0 17 chrUextra 16746930 16747222 -12257434 - RSP Satellite Satellite -1 287 1 9 712 1532 43 108 4 chrUextra 16747331 16747571 -12257085 - PROTOP_B DNA P -399 754 497 9 712 4027 19 0 4 chrUextra 16747571 16748035 -12256621 + PROTOP_A DNA P 1 462 -643 9 712 1734 14 22 18 chrUextra 16748135 16748360 -12256296 + NTS_DM Other Other 15 240 0 9 712 1947 13 17 13 chrUextra 16748360 16748599 -12256057 + NTS_DM Other Other 1 240 0 9 712 1973 8 17 13 chrUextra 16748599 16748838 -12255818 + NTS_DM Other Other 1 240 0 9 712 5827 26 13 0 chrUextra 16748939 16749625 -12255031 - NINJA_I LTR Pao -1318 4693 3999 9 712 6296 1 0 0 chrUextra 16749743 16750420 -12254236 - FW_DM LINE Jockey -702 3990 3314 9 712 3214 100 83 36 chrUextra 16750547 16751158 -12253498 - BATUMI_I LTR Pao -7323 640 1 9 712 756 33 0 11 chrUextra 16751158 16751251 -12253405 - BATUMI_I LTR Pao -679 7284 7193 9 712 6111 6 8 0 chrUextra 16751351 16752055 -12252601 + DM176_I LTR Gypsy 1278 1987 -4433 9 712 6408 8 0 6 chrUextra 16752959 16753663 -12250993 + MICROPIA_I LTR Gypsy 3140 3839 -637 9 712 6365 1 0 1 chrUextra 16753763 16754467 -12250189 + R1_DM LINE R1 2877 3579 -1777 9 712 913 98 0 0 chrUextra 16754567 16754700 -12249956 - ARS406_DM Unknown Unknown -220 133 1 9 712 3206 181 7 7 chrUextra 16754594 16755267 -12249389 + SAR_DM Satellite Satellite 180 852 -620 9 712 6462 0 1 0 chrUextra 16755371 16756075 -12248581 - Copia_I LTR Copia -3285 1308 604 9 712 5986 11 0 1 chrUextra 16756175 16756879 -12247777 - QUASIMODO_I LTR Gypsy -965 5095 4393 9 712 3726 140 12 2 chrUextra 16757125 16757683 -12246973 + Gypsy12_I LTR Gypsy 3492 4055 -1491 9 712 4670 11 37 0 chrUextra 16758587 16759130 -12245526 + IDEFIX_LTR LTR Gypsy 32 594 0 9 712 784 83 25 13 chrUextra 16759133 16759291 -12245365 + (TTATA)n Simple_repeat Simple_repeat 5 164 0 9 712 6386 0 1 3 chrUextra 16759391 16760095 -12244561 + LSU-rRNA_Dme rRNA rRNA 541 1243 -2657 9 712 3395 179 9 9 chrUextra 16760195 16760893 -12243763 + SAR_DM Satellite Satellite 379 1076 -396 9 712 3666 160 9 7 chrUextra 16761004 16761703 -12242953 + SAR_DM Satellite Satellite 326 1025 -447 9 712 319 176 5 60 chrUextra 16761918 16762032 -12242624 - HMSBEAGLE_I LTR Gypsy -6308 221 1 9 712 1000 173 102 15 chrUextra 16762031 16762236 -12242420 - DMLTR5 LTR Gypsy 0 266 44 9 712 2490 114 16 33 chrUextra 16762607 16763305 -12241351 + DMSAT6 Satellite Satellite 1 685 -40 9 712 5994 31 0 3 chrUextra 16763413 16764115 -12240541 - R1_DM LINE R1 -571 4785 4086 9 712 1063 0 8 0 chrUextra 16764215 16764332 -12240324 + SSU-rRNA_Dme rRNA rRNA 1878 1995 0 9 712 21 89 0 0 chrUextra 16764351 16764407 -12240249 + AT_rich Low_complexity Low_complexity 1 56 0 9 712 6345 4 0 1 chrUextra 16765019 16765723 -12238933 + R1_DM LINE R1 2690 3392 -1964 9 712 410 257 114 96 chrUextra 16766197 16766477 -12238179 - Invader1_LTR LTR Gypsy -55 368 84 9 712 6102 16 0 0 chrUextra 16766627 16767331 -12237325 + STALKER4_I LTR Gypsy 2606 3309 -3221 9 712 6197 14 0 3 chrUextra 16767431 16768135 -12236521 - DMRT1B LINE R1 -498 4685 3984 9 712 4329 11 2 0 chrUextra 16768235 16768712 -12235944 + LSU-rRNA_Dme rRNA rRNA 2171 2648 -1252 9 712 2125 8 0 0 chrUextra 16768700 16768939 -12235717 + R1_DM LINE R1 4840 5078 -278 9 712 963 60 3 19 chrUextra 16769039 16769722 -12234934 - RSP Satellite Satellite -21 672 1 9 712 3961 0 5 0 chrUextra 16769843 16770271 -12234385 - SSU-rRNA_Dme rRNA rRNA -129 1866 1437 9 712 2541 7 0 0 chrUextra 16770271 16770547 -12234109 + TRANSPAC_LTR LTR Gypsy 1 276 -54 9 712 945 8 31 23 chrUextra 16770650 16770780 -12233876 + NTS_DM Other Other 110 240 0 9 712 1401 6 0 18 chrUextra 16770780 16770945 -12233711 + NTS_DM Other Other 1 162 -78 9 712 521 131 36 0 chrUextra 16771055 16771139 -12233517 + NTS_DM Other Other 4 90 -150 9 712 6335 3 0 3 chrUextra 16771451 16772154 -12232502 + R1_DM LINE R1 1354 2054 -3302 9 712 2598 103 16 20 chrUextra 16772254 16772956 -12231700 - DMSAT6 Satellite Satellite -285 699 1 9 712 6334 1 0 0 chrUextra 16773057 16773760 -12230896 - Copia_I LTR Copia -685 3908 3206 9 712 1335 24 0 12 chrUextra 16773860 16774030 -12230626 - NTS_DM Other Other -35 205 38 9 712 876 0 0 0 chrUextra 16774030 16774126 -12230530 - NTS_DM Other Other -107 133 38 9 712 898 9 9 27 chrUextra 16774126 16774237 -12230419 - NTS_DM Other Other -107 133 25 9 712 21 57 0 0 chrUextra 16774263 16774298 -12230358 + AT_rich Low_complexity Low_complexity 1 35 0 9 712 1350 18 0 6 chrUextra 16774298 16774463 -12230193 - NTS_DM Other Other -39 201 38 9 712 898 10 0 0 chrUextra 16774463 16774563 -12230093 - NTS_DM Other Other -107 133 34 9 712 1837 288 32 14 chrUextra 16774664 16775323 -12229333 - G6_DM LINE Jockey -1050 992 322 9 712 2325 210 25 11 chrUextra 16775466 16776014 -12228642 + TART LINE telomeric 8963 9518 -4959 9 712 2963 60 1 16 chrUextra 16776269 16776662 -12227994 + STALKER4_LTR LTR Gypsy 47 399 -3 9 712 25 0 0 0 chrUextra 16776748 16776773 -12227883 + AT_rich Low_complexity Low_complexity 1 25 0 9 712 560 245 81 11 chrUextra 16776773 16776969 -12227687 + Stalker2_I LTR Gypsy 214 473 -6929 9 1 6099 21 1 3 chrUextra 16777072 16777775 -12226881 - R1_DM LINE R1 -2832 2524 1823 9 713 820 220 5 5 chrUextra 16777883 16778075 -12226581 - Stalker2_I LTR Gypsy -6920 482 291 9 713 25 0 0 0 chrUextra 16778099 16778124 -12226532 + AT_rich Low_complexity Low_complexity 1 25 0 9 713 694 92 20 10 chrUextra 16778244 16778343 -12226313 - STALKER4_LTR LTR Gypsy -23 379 280 9 713 1900 18 0 51 chrUextra 16778343 16778578 -12226078 + CIRCE LINE Composite 1428 1650 -4706 9 713 3012 164 62 20 chrUextra 16778678 16779326 -12225330 - TART LINE telomeric -4941 9536 8862 9 713 6538 1 1 0 chrUextra 16779481 16780181 -12224475 + SSU-rRNA_Dme rRNA rRNA 140 840 -1155 9 713 6429 1 0 1 chrUextra 16781087 16781790 -12222866 - R1_DM LINE R1 -2885 2471 1770 9 713 3512 0 0 0 chrUextra 16781890 16782264 -12222392 - LSU-rRNA_Dme rRNA rRNA -1739 2161 1788 9 713 2501 7 7 3 chrUextra 16782305 16782593 -12222063 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1503 9 713 6428 3 0 0 chrUextra 16782693 16783396 -12221260 - R1_DM LINE R1 -1549 3807 3105 9 713 3431 48 1 14 chrUextra 16783597 16784036 -12220620 + STALKER4_LTR LTR Gypsy 1 399 -3 9 713 31 58 0 0 chrUextra 16784124 16784176 -12220480 + AT_rich Low_complexity Low_complexity 1 52 0 9 713 1009 24 0 8 chrUextra 16784299 16784425 -12220231 - NTS_DM Other Other -78 162 38 9 713 898 9 9 27 chrUextra 16784425 16784536 -12220120 - NTS_DM Other Other -107 133 25 9 713 21 57 0 0 chrUextra 16784562 16784597 -12220059 + AT_rich Low_complexity Low_complexity 1 35 0 9 713 1350 18 0 6 chrUextra 16784597 16784762 -12219894 - NTS_DM Other Other -39 201 38 9 713 936 9 0 27 chrUextra 16784762 16784874 -12219782 - NTS_DM Other Other -107 133 25 9 713 22 56 0 0 chrUextra 16784900 16784936 -12219720 + AT_rich Low_complexity Low_complexity 1 36 0 9 713 278 176 0 19 chrUextra 16784949 16785001 -12219655 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 713 4058 22 0 2 chrUextra 16785905 16786367 -12218289 + G2_DM LINE Jockey 924 1384 -1718 9 713 518 230 17 90 chrUextra 16786362 16786596 -12218060 - Gypsy12_LTR LTR Gypsy -1289 1047 831 9 713 3525 174 7 8 chrUextra 16786708 16787411 -12217245 - SAR_DM Satellite Satellite -515 957 256 9 713 420 250 118 100 chrUextra 16787552 16787832 -12216824 - Invader1_LTR LTR Gypsy -55 368 84 9 713 598 196 0 9 chrUextra 16788100 16788213 -12216443 + DMLTR5 LTR Gypsy 122 233 -33 9 713 6429 1 3 3 chrUextra 16788314 16789017 -12215639 + SSU-rRNA_Dme rRNA rRNA 646 1348 -647 9 713 1106 101 101 0 chrUextra 16789118 16789286 -12215370 + DNAREP1_DM LINE Penelope 410 594 0 9 713 6184 4 1 1 chrUextra 16789920 16790623 -12214033 - R1_DM LINE R1 -4427 929 227 9 713 6405 0 0 0 chrUextra 16790723 16791426 -12213230 + ROO_I LTR Pao 6118 6820 -1436 9 713 3219 185 9 9 chrUextra 16791526 16792213 -12212443 + SAR_DM Satellite Satellite 209 895 -577 9 713 599 125 10 0 chrUextra 16792133 16792229 -12212427 - ARS406_DM Unknown Unknown -164 189 93 9 713 6438 3 0 0 chrUextra 16792329 16793032 -12211624 + FW_DM LINE Jockey 341 1043 -3649 9 713 387 89 0 0 chrUextra 16793273 16793329 -12211327 + (TG)n Simple_repeat Simple_repeat 2 57 0 9 713 3184 0 3 0 chrUextra 16793936 16794279 -12210377 + LSU-rRNA_Dme rRNA rRNA 3557 3900 0 9 713 268 196 0 19 chrUextra 16794380 16794432 -12210224 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 713 268 196 0 19 chrUextra 16794472 16794524 -12210132 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 713 278 176 0 19 chrUextra 16794555 16794607 -12210049 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 9 713 1213 48 7 0 chrUextra 16794738 16794885 -12209771 + PROTOP_B DNA P 963 1110 -43 9 713 1091 147 182 4 chrUextra 16794882 16795107 -12209549 - DMCR1A LINE CR1 -1125 3345 3081 9 713 1068 168 102 15 chrUextra 16795194 16795399 -12209257 + DMLTR5 LTR Gypsy 40 262 -4 9 713 255 73 0 0 chrUextra 16795400 16795441 -12209215 + HMSBEAGLE_I LTR Gypsy 2 42 -6487 9 713 364 217 106 0 chrUextra 16795546 16795707 -12208949 + (CAAGA)n Simple_repeat Simple_repeat 3 180 0 9 713 327 222 100 12 chrUextra 16795675 16795835 -12208821 + (CAGAA)n Simple_repeat Simple_repeat 1 174 0 9 713 281 165 119 12 chrUextra 16796004 16796164 -12208492 + (TAGA)n Simple_repeat Simple_repeat 2 178 0 9 713 5955 27 36 0 chrUextra 16796344 16797047 -12207609 + FW_DM LINE Jockey 333 1060 -3632 9 713 366 265 114 96 chrUextra 16798221 16798501 -12206155 - Invader1_LTR LTR Gypsy -55 368 84 9 713 420 250 118 100 chrUextra 16798782 16799062 -12205594 - Invader1_LTR LTR Gypsy -55 368 84 9 713 672 203 0 0 chrUextra 16799330 16799453 -12205203 + DMLTR5 LTR Gypsy 122 244 -22 9 713 31 58 0 0 chrUextra 16799579 16799631 -12205025 + AT_rich Low_complexity Low_complexity 1 52 0 9 713 3417 51 1 15 chrUextra 16799715 16800155 -12204501 - STALKER4_LTR LTR Gypsy -3 399 1 9 713 436 249 114 96 chrUextra 16800548 16800828 -12203828 - Invader1_LTR LTR Gypsy -55 368 84 9 713 2430 0 0 0 chrUextra 16801162 16801420 -12203236 + BURDOCK_I LTR Gypsy 5603 5860 0 9 713 2517 0 0 4 chrUextra 16801421 16801697 -12202959 + BURDOCK_LTR LTR Gypsy 1 275 0 9 713 32 0 0 0 chrUextra 16802232 16802264 -12202392 + AT_rich Low_complexity Low_complexity 1 32 0 9 713 2496 4 4 0 chrUextra 16802396 16802668 -12201988 + SSU-rRNA_Dme rRNA rRNA 1 273 -1722 9 713 6094 21 0 3 chrUextra 16802768 16803471 -12201185 - CIRCE LINE Composite -1599 4757 4057 9 713 285 106 0 21 chrUextra 16803630 16803678 -12200978 - HMSBEAGLE_I LTR Gypsy -6308 221 175 9 713 376 49 65 16 chrUextra 16803700 16803762 -12200894 - HMSBEAGLE_I LTR Gypsy -6464 65 1 9 713 766 193 0 7 chrUextra 16803761 16803907 -12200749 - DMLTR5 LTR Gypsy 0 266 122 9 713 4804 20 80 0 chrUextra 16804374 16805077 -12199579 + STALKER4_I LTR Gypsy 1924 2682 -3848 9 713 3183 31 47 0 chrUextra 16805184 16805570 -12199086 - PROTOP DNA P -4057 423 20 9 713 868 93 0 15 chrUextra 16805983 16806240 -12198416 - RSP Satellite Satellite -24 253 1 9 713 837 131 5 19 chrUextra 16806280 16806683 -12197973 - RSP Satellite Satellite -1 397 1 9 713 5856 31 58 0 chrUextra 16806783 16807486 -12197170 - R1_DM LINE R1 -1773 3583 2840 9 713 21 89 0 0 chrUextra 16807655 16807711 -12196945 + AT_rich Low_complexity Low_complexity 1 56 0 9 713 5191 0 4 0 chrUextra 16807730 16808289 -12196367 - SSU-rRNA_Dme rRNA rRNA 0 1995 1435 9 713 3318 187 4 9 chrUextra 16808389 16809090 -12195566 - SAR_DM Satellite Satellite -570 902 205 9 713 6314 11 3 3 chrUextra 16809192 16809895 -12194761 + SSU-rRNA_Dme rRNA rRNA 1060 1762 -233 9 713 6439 8 0 0 chrUextra 16809995 16810698 -12193958 + Gypsy6_I LTR Gypsy 6197 6899 -113 9 713 285 106 0 21 chrUextra 16811171 16811219 -12193437 - HMSBEAGLE_I LTR Gypsy -6308 221 175 9 713 376 49 65 16 chrUextra 16811241 16811303 -12193353 - HMSBEAGLE_I LTR Gypsy -6464 65 1 9 713 903 175 109 16 chrUextra 16811302 16811494 -12193162 - DMLTR5 LTR Gypsy 0 266 57 9 713 3849 74 8 4 chrUextra 16811601 16812106 -12192550 - R1_DM LINE R1 -4849 507 1 9 713 1491 18 0 0 chrUextra 16812139 16812304 -12192352 - R1_DM LINE R1 0 5356 5192 9 713 6323 10 0 0 chrUextra 16812404 16813107 -12191549 - R1_DM LINE R1 -39 5317 4615 9 713 6498 0 0 0 chrUextra 16813207 16813910 -12190746 - DOC LINE Jockey -1309 3416 2714 9 713 3386 175 13 10 chrUextra 16814010 16814710 -12189946 - SAR_DM Satellite Satellite -489 983 282 9 713 6180 30 0 0 chrUextra 16814813 16815516 -12189140 + MAX_I LTR Pao 3972 4674 -3240 9 713 3500 142 85 42 chrUextra 16815617 16816299 -12188357 - GTWIN_I LTR Gypsy -5468 953 243 9 713 3025 0 0 0 chrUextra 16816419 16816751 -12187905 - FW_DM LINE Jockey -2833 1859 1528 9 713 37 0 0 0 chrUextra 16816929 16816966 -12187690 + AT_rich Low_complexity Low_complexity 1 37 0 9 713 2995 85 126 17 chrUextra 16817268 16817925 -12186731 - Gypsy12_I LTR Gypsy 0 5546 4818 9 713 1581 22 6 0 chrUextra 16818547 16818728 -12185928 + ROO_LTR LTR Pao 1 182 -246 9 713 570 0 0 0 chrUextra 16818828 16818891 -12185765 - Copia_I LTR Copia -4530 63 1 9 713 2468 0 0 0 chrUextra 16818891 16819167 -12185489 - Copia_LTR LTR Copia 0 276 1 9 713 202 265 29 0 chrUextra 16819183 16819251 -12185405 + T-rich Low_complexity Low_complexity 3 72 0 9 713 6358 0 0 1 chrUextra 16819631 16820334 -12184322 - ROO_I LTR Pao -4433 3823 3122 9 713 28 48 0 0 chrUextra 16820482 16820524 -12184132 + AT_rich Low_complexity Low_complexity 1 42 0 9 713 534 119 36 0 chrUextra 16820797 16820881 -12183775 - NTS_DM Other Other -150 90 4 9 713 1155 14 7 21 chrUextra 16820991 16821136 -12183520 - NTS_DM Other Other -78 162 20 9 713 5996 0 1 36 chrUextra 16821237 16821940 -12182716 - LSU-rRNA_Dme rRNA rRNA -3135 765 87 9 713 2306 74 0 0 chrUextra 16822040 16822339 -12182317 - R1_DM LINE R1 -3691 1665 1367 9 713 3701 5 0 0 chrUextra 16822339 16822743 -12181913 - R1_DM LINE R1 0 5356 4953 9 713 6342 4 1 1 chrUextra 16822843 16823546 -12181110 - FW_DM LINE Jockey -97 4595 3893 9 713 229 0 0 0 chrUextra 16823646 16823671 -12180985 + ARS406_DM Unknown Unknown 137 161 -192 9 713 2863 178 23 15 chrUextra 16823649 16824349 -12180307 - SAR_DM Satellite Satellite -255 1217 198 9 713 1871 178 45 28 chrUextra 16824450 16825150 -12179506 + SAR_DM Satellite Satellite 1 711 -416 9 713 4084 103 81 33 chrUextra 16825260 16825955 -12178701 + Gypsy12_I LTR Gypsy 223 950 -4596 9 713 2503 188 12 7 chrUextra 16826055 16826757 -12177899 - SAR_DM Satellite Satellite -692 705 1 9 713 909 0 0 0 chrUextra 16826858 16826955 -12177701 - SSU-rRNA_Dme rRNA rRNA -1898 97 1 9 713 32 0 0 0 chrUextra 16827087 16827119 -12177537 + AT_rich Low_complexity Low_complexity 1 32 0 9 713 28 48 0 0 chrUextra 16827447 16827489 -12177167 + AT_rich Low_complexity Low_complexity 1 42 0 9 713 6010 1 0 36 chrUextra 16827661 16828364 -12176292 + LSU-rRNA_Dme rRNA rRNA 92 769 -3131 9 713 6438 0 0 0 chrUextra 16828464 16829167 -12175489 + R1_DM LINE R1 2351 3053 -2303 9 713 6041 30 0 0 chrUextra 16829267 16829970 -12174686 - R1_DM LINE R1 -2087 3269 2567 9 713 2233 16 0 8 chrUextra 16830070 16830329 -12174327 - R1_DM LINE R1 -3162 2194 1938 9 713 1886 54 0 4 chrUextra 16830313 16830556 -12174100 - R1_DM LINE R1 -4741 615 374 9 713 1640 69 9 0 chrUextra 16830557 16830773 -12173883 - R1_DM LINE R1 -5101 255 38 9 713 6297 6 0 0 chrUextra 16830873 16831576 -12173080 - QUASIMODO_I LTR Gypsy -4047 2013 1311 9 713 6444 0 1 1 chrUextra 16831676 16832379 -12172277 + FW_DM LINE Jockey 649 1351 -3341 9 713 2678 83 19 9 chrUextra 16832492 16833182 -12171474 - DMSAT6 Satellite Satellite 0 696 1 9 713 3964 0 2 0 chrUextra 16833282 16833707 -12170949 + LSU-rRNA_Dme rRNA rRNA 3475 3900 0 9 713 25 0 0 0 chrUextra 16833779 16833804 -12170852 + AT_rich Low_complexity Low_complexity 1 25 0 9 713 241 163 0 58 chrUextra 16833806 16833858 -12170798 + LSU-rRNA_Dme rRNA rRNA 2570 2618 -1282 9 713 241 163 0 58 chrUextra 16833906 16833958 -12170698 + LSU-rRNA_Dme rRNA rRNA 2570 2618 -1282 9 713 5314 5 0 0 chrUextra 16834085 16834672 -12169984 + FW_DM LINE Jockey 4106 4692 0 9 713 813 71 0 0 chrUextra 16834675 16834788 -12169868 + ARS406_DM Unknown Unknown 42 154 -199 9 713 2929 3 0 0 chrUextra 16834888 16835206 -12169450 + QUASIMODO_LTR LTR Gypsy 341 658 0 9 713 761 133 0 0 chrUextra 16835212 16835325 -12169331 - HMSBEAGLE_I LTR Gypsy -1814 4715 4603 9 713 1967 105 4 0 chrUextra 16835325 16835591 -12169065 - HMSBEAGLE_I LTR Gypsy -1344 5185 4919 9 713 6372 6 0 1 chrUextra 16835691 16836394 -12168262 + DOC LINE Jockey 2387 3088 -1637 9 713 4207 5 2 56 chrUextra 16837297 16837913 -12166743 - DM412B_LTR LTR Gypsy -89 482 1 9 713 6462 0 1 1 chrUextra 16838100 16838803 -12165853 + ROO_I LTR Pao 2205 2907 -5349 9 713 4922 12 0 0 chrUextra 16838903 16839496 -12165160 + DM176_I LTR Gypsy 5828 6420 0 9 713 740 10 9 82 chrUextra 16839496 16839606 -12165050 + DM176_LTR LTR Gypsy 1 102 -405 9 713 6565 1 0 0 chrUextra 16839706 16840409 -12164247 - DMRT1B LINE R1 -1353 3830 3128 9 713 6387 1 0 0 chrUextra 16840509 16841212 -12163444 - FW_DM LINE Jockey -1490 3202 2500 9 713 739 328 37 25 chrUextra 16841321 16841716 -12162940 + MICROPIA_I LTR Gypsy 3534 3893 -583 9 713 2977 199 21 16 chrUextra 16842115 16842813 -12161843 + SAR_DM Satellite Satellite 402 1103 -369 9 713 260 163 0 0 chrUextra 16842775 16842818 -12161838 - XDMR Unknown Unknown 0 361 319 9 713 5927 6 31 3 chrUextra 16842918 16843621 -12161035 - ROO_I LTR Pao -7305 951 229 9 713 2347 42 0 0 chrUextra 16843721 16844005 -12160651 - IDEFIX_I LTR Gypsy -5344 284 1 9 713 25 0 0 0 chrUextra 16844298 16844323 -12160333 + AT_rich Low_complexity Low_complexity 1 25 0 9 713 4608 6 0 0 chrUextra 16844524 16845024 -12159632 + DMRT1B LINE R1 4684 5183 0 9 713 1620 0 0 0 chrUextra 16845047 16845227 -12159429 + (CACAA)n Simple_repeat Simple_repeat 1 180 0 9 713 3080 201 6 8 chrUextra 16845327 16846030 -12158626 + SAR_DM Satellite Satellite 354 1054 -418 9 713 6441 0 3 3 chrUextra 16846130 16846833 -12157823 - SSU-rRNA_Dme rRNA rRNA -364 1631 929 9 713 6561 1 0 0 chrUextra 16846933 16847636 -12157020 - BURDOCK_I LTR Gypsy -2172 3688 2986 9 713 2168 8 0 0 chrUextra 16847736 16847972 -12156684 - MAX_LTR LTR Pao -85 236 1 9 713 4205 4 0 0 chrUextra 16847972 16848439 -12156217 - MAX_I LTR Pao 0 7914 7448 9 713 6232 21 0 1 chrUextra 16848539 16849242 -12155414 + R1_DM LINE R1 3959 4660 -696 9 713 5957 21 14 3 chrUextra 16849342 16850043 -12154613 - DMRT1B LINE R1 -3597 1586 878 9 713 2961 194 15 14 chrUextra 16850145 16850848 -12153808 - SAR_DM Satellite Satellite -663 703 1 9 713 1059 146 33 102 chrUextra 16851765 16852009 -12152647 - DMLTR5 LTR Gypsy 0 266 40 9 713 858 135 0 0 chrUextra 16852097 16852223 -12152433 - HMSBEAGLE_I LTR Gypsy 0 6529 6404 9 713 326 171 27 67 chrUextra 16852322 16852397 -12152259 - HMSBEAGLE_I LTR Gypsy -124 6405 6334 9 713 1726 93 8 0 chrUextra 16852554 16852802 -12151854 - R1_DM LINE R1 -5084 272 23 9 713 3860 21 0 0 chrUextra 16852823 16853257 -12151399 - R1_DM LINE R1 0 5356 4923 9 713 6301 1 3 0 chrUextra 16853357 16854060 -12150596 + ROO_I LTR Pao 3482 4186 -4070 9 713 5942 44 0 1 chrUextra 16854161 16854863 -12149793 - DIVER_I LTR Pao -4659 984 284 9 713 1603 0 0 0 chrUextra 16854963 16855134 -12149522 + ROO_LTR LTR Pao 258 428 0 9 713 4775 2 2 2 chrUextra 16855134 16855666 -12148990 + ROO_I LTR Pao 1 532 -7724 9 713 22 35 0 0 chrUextra 16855778 16855807 -12148849 + AT_rich Low_complexity Low_complexity 1 29 0 9 713 5764 11 0 0 chrUextra 16855841 16856469 -12148187 + Copia2_I LTR Copia 3117 3744 -418 9 713 2945 151 126 50 chrUextra 16857376 16858075 -12146581 + HETA LINE telomeric 5038 5746 -335 9 713 262 216 26 39 chrUextra 16858175 16858252 -12146404 + HETRP_DM Satellite Satellite 1607 1682 -190 9 713 728 188 13 25 chrUextra 16858371 16858529 -12146127 + HETRP_DM Satellite Satellite 1529 1684 -188 9 713 671 202 12 58 chrUextra 16858629 16858802 -12145854 + HETRP_DM Satellite Satellite 1518 1682 -190 9 713 338 262 0 24 chrUextra 16858979 16859061 -12145595 + HETRP_DM Satellite Satellite 1603 1682 -190 9 713 716 197 13 19 chrUextra 16859214 16859369 -12145287 + HETRP_DM Satellite Satellite 1529 1682 -190 9 713 747 209 6 19 chrUextra 16859524 16859680 -12144976 + HETRP_DM Satellite Satellite 1529 1682 -190 9 713 2439 62 0 75 chrUextra 16860662 16861008 -12143648 + CIRCE LINE Composite 973 1292 -5064 9 713 660 329 22 22 chrUextra 16860920 16861231 -12143425 + Gypsy12_I LTR Gypsy 3059 3369 -2177 9 713 1443 36 0 99 chrUextra 16861074 16861287 -12143369 + CIRCE LINE Composite 1305 1496 -4860 9 713 3215 173 6 31 chrUextra 16861387 16862090 -12142566 - SAR_DM Satellite Satellite -354 1118 434 9 713 737 56 0 9 chrUextra 16862190 16862298 -12142358 + (TTCTC)n Simple_repeat Simple_repeat 4 110 0 9 713 6229 10 1 0 chrUextra 16862995 16863696 -12140960 + STALKER4_I LTR Gypsy 5162 5863 -667 9 713 2464 102 24 43 chrUextra 16863801 16864469 -12140187 + DMSAT6 Satellite Satellite 1 655 -29 9 713 808 80 47 16 chrUextra 16864599 16864726 -12139930 + STALKER4_I LTR Gypsy 2090 2220 -4310 9 713 291 56 0 0 chrUextra 16864714 16864750 -12139906 + Stalker2_I LTR Gypsy 2628 2663 -4739 9 713 1551 96 37 8 chrUextra 16864752 16864993 -12139663 + STALKER4_I LTR Gypsy 2617 2864 -3666 9 713 2069 68 3 35 chrUextra 16864992 16865281 -12139375 - Gypsy6A_LTR LTR Gypsy -70 350 71 9 713 1041 93 0 0 chrUextra 16865874 16866102 -12138554 + (ACATG)n Simple_repeat Simple_repeat 1 228 0 9 713 1158 122 0 0 chrUextra 16866225 16866405 -12138251 + (TA)n Simple_repeat Simple_repeat 1 180 0 9 713 2474 8 0 0 chrUextra 16866405 16866671 -12137985 + DMLTR5 LTR Gypsy 1 266 0 9 713 2130 0 0 8 chrUextra 16866670 16866908 -12137748 + HMSBEAGLE_I LTR Gypsy 1 236 -6293 9 713 6406 1 3 3 chrUextra 16867811 16868510 -12136146 + SSU-rRNA_Dme rRNA rRNA 1253 1951 -44 9 713 6113 4 4 1 chrUextra 16868616 16869317 -12135339 + STALKER4_I LTR Gypsy 755 1457 -5073 9 713 1338 261 2 7 chrUextra 16870224 16870676 -12133980 + Gypsy11_I LTR Gypsy 2938 3387 -137 9 713 3737 39 0 0 chrUextra 16871023 16871463 -12133193 + DMCR1A LINE CR1 4031 4470 0 9 713 426 290 304 8 chrUextra 16871466 16871723 -12132933 - MICROPIA_I LTR Gypsy -2797 1679 1347 9 713 5335 19 82 0 chrUextra 16871826 16872457 -12132199 + R1_DM LINE R1 4009 4691 -665 9 713 560 99 0 12 chrUextra 16872447 16872529 -12132127 + R1_DM LINE R1 5034 5114 -242 9 713 202 265 0 0 chrUextra 16873463 16873512 -12131144 + (CTG)n Simple_repeat Simple_repeat 2 50 0 9 713 1625 47 0 0 chrUextra 16874235 16874427 -12130229 - R1_DM LINE R1 -3941 1415 1224 9 713 4004 62 19 4 chrUextra 16874423 16874938 -12129718 - R1_DM LINE R1 -4623 733 211 9 713 3969 47 83 2 chrUextra 16875038 16875554 -12129102 + DIVER2_I LTR Pao 1885 2442 -1705 9 713 5345 68 17 3 chrUextra 16875841 16876544 -12128112 + R1_DM LINE R1 15 727 -4629 9 713 21 0 0 0 chrUextra 16877014 16877035 -12127621 + AT_rich Low_complexity Low_complexity 1 21 0 9 713 49 43 0 0 chrUextra 16877209 16877279 -12127377 + AT_rich Low_complexity Low_complexity 1 70 0 9 713 21 0 0 0 chrUextra 16877547 16877568 -12127088 + AT_rich Low_complexity Low_complexity 1 21 0 9 713 1778 31 18 0 chrUextra 16879856 16880080 -12124576 - BATUMI_I LTR Pao -1309 6654 6427 9 713 3925 18 0 2 chrUextra 16880103 16880559 -12124097 + BATUMI_I LTR Pao 7303 7757 -206 9 713 928 9 0 27 chrUextra 16880680 16880792 -12123864 - NTS_DM Other Other -107 133 25 9 713 1332 18 0 6 chrUextra 16880844 16881009 -12123647 - NTS_DM Other Other -39 201 38 9 713 928 9 0 27 chrUextra 16881009 16881121 -12123535 - NTS_DM Other Other -107 133 25 9 713 22 56 0 0 chrUextra 16881147 16881183 -12123473 + AT_rich Low_complexity Low_complexity 1 36 0 9 713 257 154 258 15 chrUextra 16881183 16881249 -12123407 - LSU-rRNA_Dme rRNA rRNA -1249 2651 2570 9 713 266 196 0 19 chrUextra 16881280 16881332 -12123324 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 713 5108 62 100 6 chrUextra 16882265 16882968 -12121688 - BATUMI_I LTR Pao -6058 1905 1137 9 713 5369 100 0 0 chrUextra 16883068 16883771 -12120885 + HMSBEAGLE_I LTR Gypsy 3749 4451 -2078 9 713 6493 3 0 1 chrUextra 16883871 16884574 -12120082 + LSU-rRNA_Dme rRNA rRNA 2144 2845 -1055 9 713 6211 3 0 0 chrUextra 16885477 16886180 -12118476 + Invader2_I LTR Gypsy 3735 4437 -155 9 713 5719 0 4 65 chrUextra 16886280 16886983 -12117673 - LSU-rRNA_Dme rRNA rRNA -1745 2155 1496 9 713 1620 38 0 0 chrUextra 16887088 16887573 -12117083 + (ATAAG)n Simple_repeat Simple_repeat 1 485 0 9 713 2008 0 0 0 chrUextra 16887573 16887786 -12116870 - ROO_LTR LTR Pao 0 428 216 9 713 34 24 0 0 chrUextra 16887995 16888036 -12116620 + AT_rich Low_complexity Low_complexity 1 41 0 9 713 5710 24 1 0 chrUextra 16888689 16889392 -12115264 + R1_DM LINE R1 2940 3643 -1713 9 713 5730 28 0 0 chrUextra 16889492 16890195 -12114461 + R1_DM LINE R1 3119 3821 -1535 9 713 2989 25 0 0 chrUextra 16890295 16890657 -12113999 - FW_DM LINE Jockey -1091 3601 3240 9 713 2888 15 0 0 chrUextra 16890657 16890998 -12113658 + STALKER4_LTR LTR Gypsy 1 341 -61 9 713 1777 5 0 0 chrUextra 16891098 16891314 -12113342 + FW_DM LINE Jockey 4476 4691 -1 9 713 2218 169 8 8 chrUextra 16891319 16891801 -12112855 + SAR_DM Satellite Satellite 536 1017 -455 9 713 756 96 8 0 chrUextra 16891901 16892026 -12112630 - ARS406_DM Unknown Unknown -227 126 1 9 713 2927 179 13 6 chrUextra 16891930 16892604 -12112052 + SAR_DM Satellite Satellite 192 870 -602 9 713 397 9 0 132 chrUextra 16893274 16893403 -12111253 + (TAAAAA)n Simple_repeat Simple_repeat 2 113 0 9 713 1157 15 0 0 chrUextra 16893623 16893758 -12110898 - 5S_DM RNA RNA 0 135 1 9 713 1167 7 0 0 chrUextra 16894003 16894138 -12110518 - 5S_DM RNA RNA 0 135 1 9 713 5747 16 0 3 chrUextra 16894310 16895001 -12109655 - QUASIMODO_I LTR Gypsy -5371 689 1 9 713 2367 91 37 29 chrUextra 16895113 16895815 -12108841 + DMSAT6 Satellite Satellite 1 707 -97 9 713 4853 100 1 0 chrUextra 16895916 16896609 -12108047 - Gypsy12_I LTR Gypsy -1023 4523 3830 9 713 2765 6 0 0 chrUextra 16896739 16897060 -12107596 - MAX_LTR LTR Pao 0 321 1 9 713 2236 96 61 22 chrUextra 16897060 16897422 -12107234 - Gypsy12_I LTR Gypsy -4051 1495 1120 9 713 310 270 26 26 chrUextra 16898060 16898221 -12106435 + TIRANT_I LTR Gypsy 3596 3716 -3976 9 713 2860 149 58 24 chrUextra 16898325 16899028 -12105628 - TART LINE telomeric -4681 9796 9070 9 713 1600 315 6 6 chrUextra 16899130 16899753 -12104903 + HMSBEAGLE_I LTR Gypsy 1458 2080 -4449 9 713 219 114 0 0 chrUextra 16900169 16900204 -12104452 + (GA)n Simple_repeat Simple_repeat 1 35 0 9 713 328 0 0 67 chrUextra 16900737 16900782 -12103874 - NTS_DM Other Other -174 66 25 9 713 1252 18 0 6 chrUextra 16900834 16900999 -12103657 - NTS_DM Other Other -39 201 38 9 713 843 18 0 27 chrUextra 16900999 16901111 -12103545 - NTS_DM Other Other -107 133 25 9 713 1252 18 0 6 chrUextra 16901163 16901328 -12103328 - NTS_DM Other Other -39 201 38 9 713 862 28 0 0 chrUextra 16901328 16901436 -12103220 - NTS_DM Other Other -107 133 26 9 713 704 26 34 34 chrUextra 16901537 16901656 -12103000 + NTS_DM Other Other 122 240 0 9 713 1663 18 13 18 chrUextra 16901656 16901881 -12102775 + NTS_DM Other Other 1 224 -16 9 713 2219 4 4 4 chrUextra 16901881 16902157 -12102499 - Copia_LTR LTR Copia 0 276 1 9 713 682 12 0 0 chrUextra 16902157 16902240 -12102416 - Copia_I LTR Copia 0 4593 4511 9 713 6125 0 0 0 chrUextra 16902340 16903043 -12101613 - DMRT1A LINE R1 -1466 3717 3015 9 713 763 79 187 0 chrUextra 16903143 16903282 -12101374 - ARS406_DM Unknown Unknown -188 165 1 9 713 2438 181 8 8 chrUextra 16903204 16903846 -12100810 + SAR_DM Satellite Satellite 1 642 -677 9 713 1120 0 0 0 chrUextra 16903946 16904073 -12100583 - LSU-rRNA_Dme rRNA rRNA -1986 1914 1788 9 713 4362 9 6 4 chrUextra 16904117 16904649 -12100007 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1256 9 713 2104 215 78 13 chrUextra 16904749 16905450 -12099206 + SAR_DM Satellite Satellite 478 1224 -248 9 713 5626 30 3 1 chrUextra 16905551 16906253 -12098403 + MAX_I LTR Pao 2815 3517 -4397 9 713 2564 74 24 21 chrUextra 16906353 16907055 -12097601 - DMSAT6 Satellite Satellite -4 703 1 9 713 5617 16 7 0 chrUextra 16907155 16907857 -12096799 + Invader2_I LTR Gypsy 1908 2614 -1978 9 713 2033 39 53 4 chrUextra 16907957 16908238 -12096418 + ROO_I LTR Pao 5596 5890 -2366 9 714 5970 1 0 3 chrUextra 16908759 16909461 -12095195 - R1_DM LINE R1 -1734 3622 2923 9 714 6025 1 0 0 chrUextra 16909561 16910263 -12094393 - R1_DM LINE R1 -2125 3231 2530 9 714 6080 1 0 0 chrUextra 16910363 16911065 -12093591 - R1_DM LINE R1 -3195 2161 1460 9 714 2827 187 33 10 chrUextra 16911166 16911867 -12092789 - SAR_DM Satellite Satellite -1042 716 1 9 714 366 183 75 19 chrUextra 16912118 16912224 -12092432 - Copia_I LTR Copia -80 4513 4402 9 714 22 56 0 0 chrUextra 16912270 16912306 -12092350 + AT_rich Low_complexity Low_complexity 1 36 0 9 714 625 205 194 5 chrUextra 16912460 16912646 -12092010 + HETA LINE telomeric 4031 4251 -1830 9 714 1008 0 0 0 chrUextra 16913359 16913471 -12091185 + (CAAGA)n Simple_repeat Simple_repeat 4 115 0 9 714 972 8 0 23 chrUextra 16914373 16914501 -12090155 + NTS_DM Other Other 38 162 -78 9 714 488 119 36 0 chrUextra 16914611 16914695 -12089961 + NTS_DM Other Other 4 90 -150 9 714 28 48 0 0 chrUextra 16914968 16915010 -12089646 + AT_rich Low_complexity Low_complexity 1 42 0 9 714 2768 127 21 101 chrUextra 16915175 16915877 -12088779 + PROTOP_B DNA P 412 1057 -96 9 714 463 0 0 0 chrUextra 16915977 16916030 -12088626 - NTS_DM Other Other -187 53 1 9 714 1836 8 17 13 chrUextra 16916030 16916269 -12088387 - NTS_DM Other Other 0 240 1 9 714 1686 25 17 21 chrUextra 16916269 16916510 -12088146 - NTS_DM Other Other 0 240 1 9 714 1105 18 24 24 chrUextra 16916510 16916679 -12087977 - NTS_DM Other Other 0 240 72 9 714 2522 186 7 22 chrUextra 16916779 16917338 -12087318 + SAR_DM Satellite Satellite 1 651 -393 9 714 355 213 9 18 chrUextra 16917338 16917448 -12087208 - XDMR_DM Unknown Unknown 0 360 252 9 714 2522 186 7 22 chrUextra 16917448 16917481 -12087175 + SAR_DM Satellite Satellite 652 691 -353 9 714 1946 291 13 13 chrUextra 16917581 16918283 -12086373 - FROGGER_I LTR Copia -668 1409 708 9 714 5327 0 3 67 chrUextra 16918383 16919085 -12085571 + LSU-rRNA_Dme rRNA rRNA 1417 2073 -1827 9 714 3149 172 10 8 chrUextra 16919185 16919887 -12084769 - SAR_DM Satellite Satellite -436 1036 334 9 714 5629 1 19 1 chrUextra 16919987 16920683 -12083973 + ROO_I LTR Pao 354 1061 -7195 9 714 4694 100 1 6 chrUextra 16920789 16921491 -12083165 + R1_DM LINE R1 611 1309 -4047 9 714 6030 4 0 1 chrUextra 16921591 16922293 -12082363 - LSU-rRNA_Dme rRNA rRNA -897 3003 2303 9 714 5777 13 0 0 chrUextra 16922393 16923078 -12081578 + R1_DM LINE R1 4672 5356 0 9 714 1071 0 8 0 chrUextra 16923195 16923322 -12081334 - G6_DM LINE Jockey -1914 128 1 9 714 286 194 15 15 chrUextra 16923321 16923389 -12081267 + HETRP_DM Satellite Satellite 1602 1669 -203 9 714 192 40 0 0 chrUextra 16923520 16923545 -12081111 + (GA)n Simple_repeat Simple_repeat 2 26 0 9 714 491 208 8 16 chrUextra 16923545 16923667 -12080989 + HETRP_DM Satellite Satellite 1549 1669 -203 9 714 402 103 0 0 chrUextra 16923834 16923892 -12080764 + HETRP_DM Satellite Satellite 1529 1586 -286 9 714 413 0 62 46 chrUextra 16923997 16924062 -12080594 + NTS_DM Other Other 175 240 0 9 714 1744 21 17 17 chrUextra 16924062 16924302 -12080354 + NTS_DM Other Other 1 240 0 9 714 1756 17 17 17 chrUextra 16924302 16924542 -12080114 + NTS_DM Other Other 1 240 0 9 714 1243 19 0 0 chrUextra 16924542 16924696 -12079960 + NTS_DM Other Other 1 154 -86 9 714 6109 4 0 0 chrUextra 16924799 16925501 -12079155 - R2_DM LINE R2 -805 2802 2101 9 714 413 0 62 46 chrUextra 16925601 16925666 -12078990 + NTS_DM Other Other 175 240 0 9 714 1731 21 17 17 chrUextra 16925666 16925906 -12078750 + NTS_DM Other Other 1 240 0 9 714 1756 17 17 17 chrUextra 16925906 16926146 -12078510 + NTS_DM Other Other 1 240 0 9 714 1243 19 0 0 chrUextra 16926146 16926300 -12078356 + NTS_DM Other Other 1 154 -86 9 714 5578 1 0 36 chrUextra 16926403 16927105 -12077551 - LSU-rRNA_Dme rRNA rRNA -3210 690 14 9 714 2665 178 10 26 chrUextra 16927205 16927906 -12076750 - SAR_DM Satellite Satellite -1022 689 1 9 714 2421 91 19 14 chrUextra 16928019 16928709 -12075947 - DMSAT6 Satellite Satellite -3 693 1 9 714 1316 327 9 22 chrUextra 16928824 16929510 -12075146 - MICROPIA_I LTR Gypsy -626 3850 3198 9 714 3686 68 4 4 chrUextra 16929611 16930115 -12074541 - R1_DM LINE R1 -4852 504 1 9 714 1344 36 0 0 chrUextra 16930148 16930313 -12074343 - R1_DM LINE R1 0 5356 5192 9 714 385 168 10 29 chrUextra 16930413 16930517 -12074139 + XDMR_DM Unknown Unknown 259 360 0 9 714 2802 170 13 28 chrUextra 16930431 16931115 -12073541 - SAR_DM Satellite Satellite -353 1119 446 9 714 3037 177 8 10 chrUextra 16931215 16931917 -12072739 - SAR_DM Satellite Satellite -500 972 272 9 714 6112 0 1 0 chrUextra 16932017 16932719 -12071937 + DOC LINE Jockey 3234 3936 -789 9 714 34 0 0 0 chrUextra 16933209 16933243 -12071413 + AT_rich Low_complexity Low_complexity 1 34 0 9 714 5985 1 1 3 chrUextra 16933621 16934323 -12070333 + LSU-rRNA_Dme rRNA rRNA 655 1355 -2545 9 714 4922 37 2 0 chrUextra 16934423 16935042 -12069614 + MAX_I LTR Pao 2674 3293 -4621 9 714 727 12 0 0 chrUextra 16935039 16935125 -12069531 + MAX_I LTR Pao 3427 3512 -4402 9 714 2850 119 21 45 chrUextra 16936027 16936607 -12068049 - BATUMI_I LTR Pao -6649 1314 749 9 714 327 54 0 82 chrUextra 16936648 16936709 -12067947 - BATUMI_I LTR Pao -7194 769 714 9 714 2998 16 0 0 chrUextra 16936829 16937198 -12067458 + Copia2_I LTR Copia 3794 4162 0 9 714 2466 17 10 0 chrUextra 16937230 16937531 -12067125 + Invader1_LTR LTR Gypsy 1 304 -119 9 714 2826 177 16 26 chrUextra 16937631 16938332 -12066324 - SAR_DM Satellite Satellite -354 1118 425 9 714 32 0 0 0 chrUextra 16938564 16938596 -12066060 + AT_rich Low_complexity Low_complexity 1 32 0 9 714 28 48 0 0 chrUextra 16938924 16938966 -12065690 + AT_rich Low_complexity Low_complexity 1 42 0 9 714 6020 4 0 0 chrUextra 16939235 16939937 -12064719 + FW_DM LINE Jockey 952 1653 -3039 9 714 1781 66 47 4 chrUextra 16940038 16940295 -12064361 - R1_DM LINE R1 -4154 1202 935 9 714 3396 61 2 4 chrUextra 16940277 16940739 -12063917 - R1_DM LINE R1 -4740 616 156 9 714 2020 12 0 0 chrUextra 16941641 16941881 -12062775 + TRANSIB2 DNA Transib 930 1169 -1675 9 714 3391 34 7 0 chrUextra 16941880 16942317 -12062339 + TRANSIB2 DNA Transib 2405 2844 0 9 714 3096 171 13 10 chrUextra 16942443 16943145 -12061511 + SAR_DM Satellite Satellite 301 1004 -468 9 714 2066 84 43 9 chrUextra 16944047 16944396 -12060260 - S_DM DNA Tc1 -1375 361 1 9 714 1114 23 0 8 chrUextra 16944396 16944523 -12060133 - CIRCE LINE Composite -1861 4495 4370 9 714 1155 99 49 58 chrUextra 16944523 16944749 -12059907 - ROVER-LTR_DM LTR Gypsy 0 367 144 9 714 6381 3 0 0 chrUextra 16944849 16945551 -12059105 + R1_DM LINE R1 2857 3558 -1798 9 714 6502 1 0 1 chrUextra 16945651 16946352 -12058304 + LSU-rRNA_Dme rRNA rRNA 2205 2904 -996 9 714 1805 10 0 0 chrUextra 16946453 16946649 -12058007 + MAX_LTR LTR Pao 126 321 0 9 714 4414 6 8 12 chrUextra 16946649 16947155 -12057501 + MAX_I LTR Pao 1 504 -7410 9 714 1243 68 0 6 chrUextra 16947258 16947412 -12057244 + DIVER2_I LTR Pao 8 160 -3987 9 714 4420 6 2 2 chrUextra 16947412 16947894 -12056762 - Gypsy_LTR LTR Gypsy 0 482 1 9 714 581 0 0 0 chrUextra 16947894 16947957 -12056699 - Gypsy_I LTR Gypsy 0 6507 6445 9 714 499 134 42 59 chrUextra 16948174 16948293 -12056363 - NTS_DM Other Other -120 120 4 9 714 1401 6 0 18 chrUextra 16948403 16948568 -12056088 - NTS_DM Other Other -78 162 1 9 714 1541 0 21 16 chrUextra 16948568 16948759 -12055897 - NTS_DM Other Other 0 240 49 9 714 5228 10 9 0 chrUextra 16948859 16949443 -12055213 - PROTOP_A DNA P -516 589 1 9 714 829 87 0 17 chrUextra 16949443 16949560 -12055096 - Gypsy2_I LTR Gypsy -338 5797 5683 9 714 2066 21 21 0 chrUextra 16949663 16949895 -12054761 + STALKER4_LTR LTR Gypsy 28 264 -138 9 714 4212 11 0 0 chrUextra 16949895 16950363 -12054293 - DM176_LTR LTR Gypsy 0 507 40 9 714 3247 32 74 2 chrUextra 16950465 16950871 -12053785 - DOC3_DM LINE Jockey -1301 3439 3005 9 714 2509 34 20 0 chrUextra 16950870 16951165 -12053491 - DOC3_DM LINE Jockey -1886 2854 2554 9 714 1175 8 0 8 chrUextra 16951265 16951399 -12053257 - ROO_LTR LTR Pao -295 133 1 9 714 5154 0 0 0 chrUextra 16951399 16951965 -12052691 + ROO_I LTR Pao 6210 6775 -1481 9 714 6513 1 0 0 chrUextra 16952073 16952769 -12051887 - LSU-rRNA_Dme rRNA rRNA -497 3403 2708 9 714 2495 0 0 0 chrUextra 16952869 16953134 -12051522 - ROO_LTR LTR Pao -163 265 1 9 714 1682 41 272 5 chrUextra 16953159 16953571 -12051085 + PROTOP_B DNA P 358 879 -274 9 714 3025 188 46 23 chrUextra 16953675 16954372 -12050284 + SAR_DM Satellite Satellite 1 713 -203 9 714 5915 21 60 1 chrUextra 16954473 16955175 -12049481 - R1_DM LINE R1 -1522 3834 3092 9 714 21 0 0 0 chrUextra 16955886 16955907 -12048749 + AT_rich Low_complexity Low_complexity 1 21 0 9 714 4239 158 27 1 chrUextra 16957684 16958380 -12046276 + Gypsy5_I LTR Gypsy 3085 3798 -2711 9 714 837 0 0 0 chrUextra 16958485 16958578 -12046078 + (GAGAA)n Simple_repeat Simple_repeat 1 93 0 9 714 2231 101 89 0 chrUextra 16959293 16959620 -12045036 - Gypsy12_I LTR Gypsy -2742 2804 2449 9 714 248 27 216 0 chrUextra 16959626 16959663 -12044993 - PROTOP_A DNA P -1060 45 1 9 714 5654 50 0 3 chrUextra 16960087 16960789 -12043867 - R1_DM LINE R1 -4451 905 206 9 714 6437 7 0 1 chrUextra 16960889 16961590 -12043066 + SSU-rRNA_Dme rRNA rRNA 487 1186 -809 9 714 5945 33 0 1 chrUextra 16961691 16962393 -12042263 - R1_DM LINE R1 -783 4573 3873 9 714 1620 20 0 4 chrUextra 16962493 16962980 -12041676 + (TAGA)n Simple_repeat Simple_repeat 1 485 0 9 714 1474 11 0 11 chrUextra 16963000 16963182 -12041474 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 9 714 1224 7 0 0 chrUextra 16963389 16963524 -12041132 - 5S_DM RNA RNA 0 135 1 9 714 1246 0 0 0 chrUextra 16963765 16963900 -12040756 - 5S_DM RNA RNA 0 135 1 9 714 6324 13 0 0 chrUextra 16964097 16964799 -12039857 + Copia2_I LTR Copia 1153 1854 -2308 9 714 6415 3 0 0 chrUextra 16964899 16965599 -12039057 - R1_DM LINE R1 -2995 2361 1662 9 714 3470 3 0 0 chrUextra 16965701 16966077 -12038579 - LSU-rRNA_Dme rRNA rRNA -885 3015 2640 9 714 2960 3 3 3 chrUextra 16966075 16966403 -12038253 - R1_DM LINE R1 0 5356 5029 9 714 6457 0 1 3 chrUextra 16966505 16967205 -12037451 + LSU-rRNA_Dme rRNA rRNA 2515 3213 -687 9 714 4786 10 1 86 chrUextra 16967329 16968007 -12036649 + DM176_I LTR Gypsy 1 621 -5799 9 714 2297 192 96 25 chrUextra 16968107 16968808 -12035848 + SAR_DM Satellite Satellite 1 750 -203 9 714 2156 92 106 25 chrUextra 16968909 16969231 -12035425 + Gypsy12_I LTR Gypsy 4679 5026 -520 9 714 937 42 8 0 chrUextra 16969228 16969346 -12035310 + Gypsy12_I LTR Gypsy 5428 5546 0 9 714 1315 171 12 24 chrUextra 16969360 16969611 -12035045 + Gypsy12_LTR LTR Gypsy 13 260 -2076 9 714 6117 24 1 0 chrUextra 16969712 16970413 -12034243 - R1_DM LINE R1 -286 5070 4369 9 714 319 294 31 8 chrUextra 16970513 16970640 -12034016 + Invader4_I LTR Gypsy 6 135 -2278 9 714 432 310 41 42 chrUextra 16970692 16971028 -12033628 + Invader1_I LTR Gypsy 888 1226 -1960 9 714 5428 72 7 4 chrUextra 16971315 16972017 -12032639 + BS LINE Jockey 572 1275 -3851 9 714 862 291 24 32 chrUextra 16972428 16972818 -12031838 - Invader1_I LTR Gypsy -622 2564 2195 9 714 5978 29 10 1 chrUextra 16972919 16973621 -12031035 + R1_DM LINE R1 2123 2830 -2526 9 714 1465 0 0 0 chrUextra 16974525 16974690 -12029966 + Copia_LTR LTR Copia 112 276 0 9 714 4980 0 0 0 chrUextra 16974690 16975225 -12029431 + Copia_I LTR Copia 1 535 -4058 9 714 2330 196 19 14 chrUextra 16976129 16976829 -12027827 - SAR_DM Satellite Satellite -879 703 1 9 714 1458 0 0 0 chrUextra 16976929 16977086 -12027570 - LSU-rRNA_Dme rRNA rRNA -3743 157 1 9 714 21 95 0 0 chrUextra 16977098 16977161 -12027495 + AT_rich Low_complexity Low_complexity 1 63 0 9 714 34 24 0 0 chrUextra 16977374 16977415 -12027241 + AT_rich Low_complexity Low_complexity 1 41 0 9 714 5652 31 3 30 chrUextra 16977731 16978433 -12026223 - CIRCE LINE Composite -3605 2751 2069 9 714 6458 1 0 0 chrUextra 16978533 16979235 -12025421 + R1_DM LINE R1 1978 2679 -2677 9 714 6291 20 1 0 chrUextra 16979335 16980037 -12024619 - Copia2_I LTR Copia -1962 2200 1498 9 714 6537 0 1 0 chrUextra 16980137 16980839 -12023817 + NOMAD_I LTR Gypsy 1190 1892 -4680 9 714 1940 109 4 4 chrUextra 16980939 16981207 -12023449 - R1_DM LINE R1 -3981 1375 1108 9 714 2092 119 82 70 chrUextra 16981204 16981630 -12023026 - R1_DM LINE R1 -4646 710 280 9 714 5109 14 9 47 chrUextra 16981741 16982047 -12022609 - DM176_I LTR Gypsy -5598 822 537 9 714 208 28 26 53 chrUextra 16982047 16982085 -12022571 + (TTA)n Simple_repeat Simple_repeat 3 39 0 9 714 5109 14 9 47 chrUextra 16982085 16982443 -12022213 - DM176_I LTR Gypsy -5884 536 183 9 714 6042 1 0 3 chrUextra 16983351 16984047 -12020609 + DM176_I LTR Gypsy 873 1566 -4854 9 714 6506 0 3 1 chrUextra 16984949 16985651 -12019005 + LSU-rRNA_Dme rRNA rRNA 3091 3793 -107 9 714 6467 1 3 1 chrUextra 16985751 16986453 -12018203 - SSU-rRNA_Dme rRNA rRNA -746 1249 547 9 714 5675 31 54 0 chrUextra 16986553 16987255 -12017401 + ROO_I LTR Pao 4319 5058 -3198 9 714 2826 59 57 0 chrUextra 16987685 16988056 -12016600 - PROTOP_A DNA P 0 1105 714 9 714 6277 14 1 0 chrUextra 16988157 16988859 -12015797 - DM1731_I LTR Copia -2886 1090 388 9 714 3659 9 9 5 chrUextra 16989766 16990214 -12014442 + STALKER4_I LTR Gypsy 6081 6530 0 9 714 2220 8 8 0 chrUextra 16990214 16990463 -12014193 + STALKER4_LTR LTR Gypsy 1 251 -151 9 714 2743 81 81 7 chrUextra 16990564 16990996 -12013660 - TRANSIB2 DNA Transib -186 2658 1810 9 714 6446 3 1 3 chrUextra 16991365 16992067 -12012589 + SSU-rRNA_Dme rRNA rRNA 980 1680 -315 9 714 6281 17 1 0 chrUextra 16992167 16992869 -12011787 - STALKER4_I LTR Gypsy -2169 4361 3659 9 714 6537 0 1 0 chrUextra 16992971 16993671 -12010985 - LSU-rRNA_Dme rRNA rRNA -459 3441 2741 9 714 3174 3 3 0 chrUextra 16993771 16994118 -12010538 + R1_DM LINE R1 5009 5356 0 9 714 3310 3 0 0 chrUextra 16994116 16994473 -12010183 + LSU-rRNA_Dme rRNA rRNA 2640 2996 -904 9 714 268 196 0 19 chrUextra 16994614 16994666 -12009990 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 714 268 196 0 19 chrUextra 16994706 16994758 -12009898 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 9 714 3848 0 5 0 chrUextra 16994859 16995275 -12009381 - LSU-rRNA_Dme rRNA rRNA 0 3900 3483 9 714 3028 186 30 19 chrUextra 16995375 16996072 -12008584 + SAR_DM Satellite Satellite 181 885 -587 9 714 5259 73 4 0 chrUextra 16996177 16996879 -12007777 + TART LINE telomeric 434 1138 -13339 9 714 981 0 0 0 chrUextra 16996979 16997084 -12007572 + LSU-rRNA_Dme rRNA rRNA 2528 2632 -1268 9 714 5411 5 3 0 chrUextra 16997084 16997681 -12006975 + R1_DM LINE R1 1 599 -4757 9 714 235 309 51 51 chrUextra 16999079 16999256 -12005400 - Gypsy6_I LTR Gypsy -2298 4714 4538 9 714 22 0 0 0 chrUextra 16999261 16999283 -12005373 + AT_rich Low_complexity Low_complexity 1 22 0 9 714 1254 113 0 119 chrUextra 16999385 16999637 -12005019 - DIVER_LTR LTR Pao -2 222 1 9 714 3130 39 0 0 chrUextra 16999637 17000000 -12004656 - DIVER_I LTR Pao 0 5643 5281 9 714 700 35 0 0 chrUextra 17000000 17000087 -12004569 - DIVER_I LTR Pao -363 5280 5194 9 714 5513 4 1 4 chrUextra 17000187 17000889 -12003767 + STALKER4_I LTR Gypsy 5827 6526 -4 9 714 5951 3 0 1 chrUextra 17000989 17001691 -12002965 + FW_DM LINE Jockey 1124 1824 -2868 9 714 5889 1 0 1 chrUextra 17001791 17002493 -12002163 + STALKER4_I LTR Gypsy 5474 6174 -356 9 714 6151 1 1 0 chrUextra 17002593 17003295 -12001361 + LSU-rRNA_Dme rRNA rRNA 3049 3751 -149 9 714 5039 55 13 16 chrUextra 17003395 17004097 -12000559 + R1_DM LINE R1 220 919 -4437 9 714 2792 188 8 6 chrUextra 17004205 17004862 -11999794 - SAR_DM Satellite Satellite -620 852 195 9 714 803 100 0 0 chrUextra 17004769 17004899 -11999757 + ARS406_DM Unknown Unknown 1 130 -223 9 714 3009 151 23 42 chrUextra 17004999 17005698 -11998958 - SAR_DM Satellite Satellite -485 987 302 9 714 2119 129 121 49 chrUextra 17005828 17006503 -11998153 + TAHRE LINE telomeric 10013 10451 -12 9 714 5841 11 3 1 chrUextra 17006603 17007305 -11997351 + Invader2_I LTR Gypsy 632 1334 -3258 9 714 3148 159 12 12 chrUextra 17007405 17008086 -11996570 - SAR_DM Satellite Satellite -466 1006 326 9 714 5876 16 1 0 chrUextra 17008207 17008909 -11995747 - BS LINE Jockey -3608 1518 816 9 714 1314 0 0 6 chrUextra 17009009 17009166 -11995490 - BLOOD_I LTR Gypsy -6457 156 1 9 714 3200 5 45 0 chrUextra 17009166 17009379 -11995277 - BLOOD_LTR LTR Gypsy 0 399 187 9 714 180 0 0 0 chrUextra 17009379 17009399 -11995257 + (GA)n Simple_repeat Simple_repeat 2 21 0 9 714 3200 5 45 0 chrUextra 17009399 17009567 -11995089 - BLOOD_LTR LTR Gypsy -213 186 2 9 714 2486 67 0 6 chrUextra 17009811 17010156 -11994500 + HOBO DNA hAT 604 946 -2070 9 714 2304 75 8 8 chrUextra 17010161 17010513 -11994143 + HOBO DNA hAT 1100 1451 -1565 9 714 2054 81 27 6 chrUextra 17010632 17010966 -11993690 + TART LINE telomeric 9637 9977 -4500 9 714 2208 93 6 40 chrUextra 17010967 17011314 -11993342 + TART LINE telomeric 10144 10478 -3999 9 714 866 0 9 0 chrUextra 17011415 17011520 -11993136 - R2_DM LINE R2 -3500 107 2 9 714 5212 2 0 0 chrUextra 17011519 17012117 -11992539 - LSU-rRNA_Dme rRNA rRNA -1351 2549 1952 9 714 6050 4 0 3 chrUextra 17012217 17012919 -11991737 + LSU-rRNA_Dme rRNA rRNA 3195 3894 -6 9 714 1072 288 41 46 chrUextra 17013039 17013716 -11990940 + SAR_DM Satellite Satellite 428 1101 -371 9 714 5903 6 1 3 chrUextra 17013821 17014523 -11990133 - R1_DM LINE R1 -879 4477 3777 9 714 468 118 0 0 chrUextra 17014704 17014780 -11989876 - DNAREP1_DM LINE Penelope 0 594 519 9 714 291 203 31 0 chrUextra 17014807 17014871 -11989785 - DNAREP1_DM LINE Penelope -510 84 19 9 714 317 0 0 0 chrUextra 17015425 17015467 -11989189 + NTS_DM Other Other 92 133 -107 9 714 1438 15 20 20 chrUextra 17015467 17015670 -11988986 + NTS_DM Other Other 38 240 0 9 714 709 24 0 0 chrUextra 17015670 17015752 -11988904 + NTS_DM Other Other 1 82 -158 9 714 1582 129 40 76 chrUextra 17015752 17016122 -11988534 - Gypsy6_LTR LTR Gypsy 0 407 51 9 714 2724 197 10 50 chrUextra 17016230 17016926 -11987730 + Stalker2_I LTR Gypsy 3648 4315 -3087 9 714 636 113 0 0 chrUextra 17017029 17017135 -11987521 - ARS406_DM Unknown Unknown -247 106 1 9 714 3051 178 6 9 chrUextra 17017042 17017729 -11986927 + SAR_DM Satellite Satellite 195 879 -593 9 714 2397 203 53 10 chrUextra 17017831 17018527 -11986129 - SAR_DM Satellite Satellite -480 992 267 9 714 2872 195 7 9 chrUextra 17018642 17019331 -11985325 + SAR_DM Satellite Satellite 192 879 -593 9 714 2937 184 7 10 chrUextra 17019440 17020134 -11984522 + SAR_DM Satellite Satellite 212 903 -569 9 714 5932 0 0 0 chrUextra 17020237 17020939 -11983717 + Copia_I LTR Copia 2998 3699 -894 9 714 3540 17 112 1 chrUextra 17021039 17021741 -11982915 + R1_DM LINE R1 3387 4166 -1190 9 714 6086 0 0 0 chrUextra 17021841 17022543 -11982113 - Invader2_I LTR Gypsy -3193 1399 698 9 714 5469 28 6 20 chrUextra 17022643 17023345 -11981311 + CIRCE LINE Composite 2706 3397 -2959 9 714 5706 24 0 0 chrUextra 17023445 17024147 -11980509 + FW_DM LINE Jockey 2901 3602 -1090 9 714 4832 51 40 0 chrUextra 17024247 17024949 -11979707 + DM297_I LTR Gypsy 3416 4145 -2022 9 714 6041 3 0 0 chrUextra 17025049 17025751 -11978905 + DMRT1A LINE R1 2180 2881 -2302 9 714 1620 13 0 0 chrUextra 17026657 17027293 -11977363 + (TAGA)n Simple_repeat Simple_repeat 1 636 0 9 714 225 108 0 0 chrUextra 17027318 17027355 -11977301 + (ACCG)n Simple_repeat Simple_repeat 1 37 0 9 714 3423 2 1 37 chrUextra 17027455 17028157 -11976499 - DM412B_LTR LTR Gypsy -142 429 1 9 714 5999 1 1 0 chrUextra 17028257 17028959 -11975697 + DOC LINE Jockey 1156 1858 -2867 9 714 6125 1 0 0 chrUextra 17029059 17029761 -11974895 + FW_DM LINE Jockey 3406 4107 -585 9 714 3013 178 9 9 chrUextra 17029862 17030553 -11974103 - SAR_DM Satellite Satellite -587 885 195 9 714 5458 29 75 0 chrUextra 17030663 17031365 -11973291 + R1_DM LINE R1 1867 2621 -2735 9 714 3802 5 0 0 chrUextra 17031465 17031909 -11972747 - DMRT1B LINE R1 -2362 2821 2378 9 714 2039 39 0 0 chrUextra 17031911 17032167 -11972489 + R1_DM LINE R1 4583 4838 -518 9 714 225 0 0 0 chrUextra 17032267 17032292 -11972364 + (TCTTG)n Simple_repeat Simple_repeat 2 26 0 9 714 736 298 59 28 chrUextra 17033073 17033766 -11970890 - TABOR_I LTR Gypsy -3595 3001 2285 9 714 2593 3 0 0 chrUextra 17034673 17034971 -11969685 - LSU-rRNA_Dme rRNA rRNA -963 2937 2640 9 714 3488 2 0 2 chrUextra 17034969 17035375 -11969281 - R1_DM LINE R1 0 5356 4952 9 714 2938 185 10 10 chrUextra 17035476 17036176 -11968480 + SAR_DM Satellite Satellite 212 911 -561 9 714 5965 3 1 4 chrUextra 17036277 17036979 -11967677 - SSU-rRNA_Dme rRNA rRNA -452 1543 844 9 714 6018 3 1 3 chrUextra 17037079 17037781 -11966875 + SSU-rRNA_Dme rRNA rRNA 662 1362 -633 9 714 1620 0 0 0 chrUextra 17037881 17038136 -11966520 + (AGATG)n Simple_repeat Simple_repeat 1 255 0 9 714 1305 51 0 0 chrUextra 17038138 17038316 -11966340 + (ACATG)n Simple_repeat Simple_repeat 1 178 0 9 714 1620 0 4 0 chrUextra 17038316 17038583 -11966073 + (AGATG)n Simple_repeat Simple_repeat 1 267 0 9 89 5202 29 65 3 chrUextra 17038683 17039385 -11965271 - Transib5 DNA Transib -1262 1739 994 9 715 5387 1 0 66 chrUextra 17039486 17040187 -11964469 - LSU-rRNA_Dme rRNA rRNA -1537 2363 1709 9 715 430 188 0 0 chrUextra 17040290 17040375 -11964281 - SAR_DM Satellite Satellite -425 1047 963 9 715 359 78 0 0 chrUextra 17040386 17040437 -11964219 + ARS406_DM Unknown Unknown 136 186 -167 9 715 2322 175 49 13 chrUextra 17040393 17040989 -11963667 - SAR_DM Satellite Satellite -610 862 246 9 715 301 212 0 23 chrUextra 17041091 17041178 -11963478 + XDMR_DM Unknown Unknown 267 351 -9 9 715 2877 174 14 26 chrUextra 17041101 17041791 -11962865 - SAR_DM Satellite Satellite -354 1118 437 9 715 370 115 0 90 chrUextra 17041891 17041958 -11962698 - HETRP_DM Satellite Satellite -294 1578 1518 9 715 501 208 8 16 chrUextra 17042102 17042224 -11962432 - HETRP_DM Satellite Satellite -203 1669 1549 9 715 300 27 0 0 chrUextra 17042224 17042261 -11962395 + (TC)n Simple_repeat Simple_repeat 2 38 0 9 715 711 188 58 52 chrUextra 17042385 17042576 -11962080 - HETRP_DM Satellite Satellite -197 1675 1484 9 715 3424 32 38 50 chrUextra 17043495 17044017 -11960639 - NINJA_I LTR Pao -5495 516 1 9 715 1370 50 6 6 chrUextra 17044017 17044197 -11960459 - NINJA_LTR LTR Pao 0 317 138 9 715 5695 34 0 1 chrUextra 17044297 17044999 -11959657 - R2_DM LINE R2 -826 2781 2081 9 715 5250 40 81 1 chrUextra 17045099 17045801 -11958855 - R1_DM LINE R1 -2091 3265 2508 9 715 6043 0 4 0 chrUextra 17045901 17046603 -11958053 + TART LINE telomeric 9870 10574 -3903 9 715 3063 177 9 9 chrUextra 17046711 17047399 -11957257 - SAR_DM Satellite Satellite -416 1056 369 9 715 255 132 0 19 chrUextra 17047512 17047566 -11957090 + DMLTR5 LTR Gypsy 214 266 0 9 715 351 49 65 16 chrUextra 17047565 17047627 -11957029 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 9 715 249 128 0 21 chrUextra 17047649 17047697 -11956959 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 9 715 1111 18 24 24 chrUextra 17048307 17048477 -11956179 + NTS_DM Other Other 71 240 0 9 715 1734 21 17 17 chrUextra 17048477 17048717 -11955939 + NTS_DM Other Other 1 240 0 9 715 1850 4 17 13 chrUextra 17048717 17048956 -11955700 + NTS_DM Other Other 1 240 0 9 715 435 0 19 0 chrUextra 17048956 17049009 -11955647 + NTS_DM Other Other 1 54 -186 9 715 5133 68 17 0 chrUextra 17049109 17049811 -11954845 + TART_B1 LINE telomeric 2843 3556 -7098 9 715 3073 47 2 2 chrUextra 17049911 17050314 -11954342 + R1_DM LINE R1 988 1390 -3966 9 715 2341 24 3 0 chrUextra 17050315 17050613 -11954043 - FW_DM LINE Jockey -2 4690 4392 9 715 58 15 0 0 chrUextra 17050886 17050951 -11953705 + AT_rich Low_complexity Low_complexity 1 65 0 9 715 21 36 0 0 chrUextra 17051293 17051321 -11953335 + AT_rich Low_complexity Low_complexity 1 28 0 9 715 2165 181 8 12 chrUextra 17051517 17052014 -11952642 - SAR_DM Satellite Satellite -482 990 496 9 715 938 121 11 11 chrUextra 17052029 17052204 -11952452 - SAR_DM Satellite Satellite -569 903 729 9 715 28 48 0 0 chrUextra 17052366 17052408 -11952248 + AT_rich Low_complexity Low_complexity 1 42 0 9 715 5842 9 1 0 chrUextra 17053119 17053820 -11950836 - STALKER4_I LTR Gypsy -4355 2175 1474 9 715 5921 13 4 0 chrUextra 17053920 17054621 -11950035 - Copia2_I LTR Copia -1604 2558 1855 9 715 2917 183 7 11 chrUextra 17054726 17055421 -11949235 - SAR_DM Satellite Satellite -569 903 212 9 715 6037 1 0 0 chrUextra 17055522 17056223 -11948433 - R1_DM LINE R1 -3460 1896 1196 9 715 6074 4 0 0 chrUextra 17056323 17057024 -11947632 - R2_DM LINE R2 -322 3285 2585 9 715 1177 23 22 22 chrUextra 17057124 17057305 -11947351 + NTS_DM Other Other 60 240 0 9 715 1756 17 17 17 chrUextra 17057305 17057545 -11947111 + NTS_DM Other Other 1 240 0 9 715 1713 25 17 17 chrUextra 17057545 17057785 -11946871 + NTS_DM Other Other 1 240 0 9 715 332 25 0 0 chrUextra 17057785 17057825 -11946831 + NTS_DM Other Other 1 40 -200 9 715 4241 20 84 0 chrUextra 17057925 17058626 -11946030 + FW_DM LINE Jockey 1090 1849 -2843 9 715 5866 9 0 0 chrUextra 17058726 17059427 -11945229 - STALKER4_I LTR Gypsy -3841 2689 1989 9 715 2945 0 3 0 chrUextra 17059527 17059867 -11944789 + R1_DM LINE R1 5016 5356 0 9 715 3108 3 3 0 chrUextra 17059865 17060228 -11944428 + LSU-rRNA_Dme rRNA rRNA 2640 3003 -897 9 715 6003 1 0 0 chrUextra 17060328 17061029 -11943627 - MDG3_I LTR Gypsy -701 4285 3585 9 715 4395 142 9 0 chrUextra 17061133 17061830 -11942826 - Gypsy_I LTR Gypsy -2313 4194 3492 9 715 5172 43 60 1 chrUextra 17062731 17063432 -11941224 + R1_DM LINE R1 623 1364 -3992 9 715 6075 6 0 0 chrUextra 17063532 17064233 -11940423 + R2_DM LINE R2 2658 3358 -249 9 715 189 147 0 0 chrUextra 17064520 17064554 -11940102 + (TTTTTG)n Simple_repeat Simple_repeat 1 34 0 9 715 47 0 0 0 chrUextra 17064893 17064940 -11939716 + AT_rich Low_complexity Low_complexity 1 47 0 9 715 583 13 0 0 chrUextra 17064956 17065034 -11939622 - Gypsy4_I LTR Gypsy -5911 377 300 9 715 2848 173 33 21 chrUextra 17065137 17065835 -11938821 - SAR_DM Satellite Satellite -511 961 256 9 715 3487 0 0 0 chrUextra 17065937 17066333 -11938323 - LSU-rRNA_Dme rRNA rRNA -1717 2183 1788 9 715 2076 0 8 8 chrUextra 17066377 17066636 -11938020 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1530 9 715 4648 14 100 1 chrUextra 17066736 17067437 -11937219 - R1_DM LINE R1 -1088 4268 3499 9 715 3949 91 23 23 chrUextra 17067537 17068238 -11936418 - TART LINE telomeric -4593 9884 9184 9 715 2386 159 19 27 chrUextra 17068338 17069840 -11934816 + DMSAT6 Satellite Satellite 1 1489 -285 9 715 5797 7 0 1 chrUextra 17069940 17070641 -11934015 - Invader2_I LTR Gypsy -2842 1750 1051 9 715 1083 264 41 23 chrUextra 17070942 17071442 -11933214 + G_DM LINE Jockey 322 853 -3493 9 715 3138 181 5 9 chrUextra 17071542 17072243 -11932413 + SAR_DM Satellite Satellite 1 697 -396 9 715 226 75 24 24 chrUextra 17072345 17072386 -11932270 + ARS406_DM Unknown Unknown 149 189 -164 9 715 2319 160 22 4 chrUextra 17072353 17073042 -11931614 - SAR_DM Satellite Satellite -625 701 1 9 715 5576 36 0 1 chrUextra 17073144 17073845 -11930811 + MDG1_I LTR Gypsy 3501 4200 -2396 9 715 4296 96 13 30 chrUextra 17073945 17074641 -11930015 - TART LINE telomeric -6945 7532 6849 9 715 3587 9 2 2 chrUextra 17074746 17075198 -11929458 + IDEFIX_I LTR Gypsy 5177 5628 0 9 715 1924 4 76 0 chrUextra 17075198 17075447 -11929209 + IDEFIX_LTR LTR Gypsy 1 268 -326 9 715 1396 0 0 0 chrUextra 17075547 17075710 -11928946 + QUASIMODO_LTR LTR Gypsy 496 658 0 9 715 4249 4 7 39 chrUextra 17075710 17076248 -11928408 + QUASIMODO_I LTR Gypsy 1 521 -5539 9 715 3056 183 6 14 chrUextra 17076348 17077049 -11927607 + SAR_DM Satellite Satellite 1 695 -396 9 715 5903 13 1 1 chrUextra 17077149 17077850 -11926806 + R2_DM LINE R2 2506 3206 -401 9 715 930 0 0 0 chrUextra 17077950 17078058 -11926598 + 5S_DM RNA RNA 28 135 0 9 715 1167 7 0 0 chrUextra 17078299 17078434 -11926222 + 5S_DM RNA RNA 1 135 0 9 715 5935 10 26 0 chrUextra 17078751 17079452 -11925204 + Invader6_I LTR Gypsy 1291 2009 -2090 9 715 270 188 16 0 chrUextra 17079552 17079616 -11925040 + XDMR Unknown Unknown 297 361 0 9 715 2909 178 7 19 chrUextra 17079561 17080253 -11924403 - SAR_DM Satellite Satellite -353 1119 436 9 715 5992 1 0 0 chrUextra 17080353 17081054 -11923602 - LSU-rRNA_Dme rRNA rRNA -2723 1177 477 9 715 4762 5 11 0 chrUextra 17081154 17081716 -11922940 + Copia2_I LTR Copia 556 1123 -3039 9 715 1157 7 7 0 chrUextra 17081711 17081855 -11922801 + Copia2_I LTR Copia 1233 1377 -2785 9 715 6053 4 0 1 chrUextra 17081955 17082656 -11922000 + DM1731_I LTR Copia 2796 3495 -481 9 715 5777 10 7 0 chrUextra 17082756 17083457 -11921199 - STALKER4_I LTR Gypsy -3953 2577 1872 9 715 5902 3 0 0 chrUextra 17083557 17084258 -11920398 + ROO_I LTR Pao 2742 3442 -4814 9 715 922 168 102 15 chrUextra 17084697 17084902 -11919754 + DMLTR5 LTR Gypsy 44 266 0 9 715 351 49 65 16 chrUextra 17084901 17084963 -11919693 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 9 715 241 176 0 19 chrUextra 17084977 17085029 -11919627 + HMSBEAGLE_I LTR Gypsy 171 221 -6308 9 715 5989 3 1 0 chrUextra 17086761 17087462 -11917194 - LSU-rRNA_Dme rRNA rRNA -2619 1281 580 9 715 4574 10 0 51 chrUextra 17087562 17088191 -11916465 - ROVER-I_DM LTR Gypsy -5440 1144 548 9 715 619 0 0 0 chrUextra 17088191 17088263 -11916393 - ROVER-I_DM LTR Gypsy -6339 245 174 9 715 2491 7 0 0 chrUextra 17088363 17088652 -11916004 - SSU-rRNA_Dme rRNA rRNA -1706 289 1 9 715 32 0 0 0 chrUextra 17088784 17088816 -11915840 + AT_rich Low_complexity Low_complexity 1 32 0 9 715 5855 9 0 0 chrUextra 17089164 17089865 -11914791 + STALKER4_I LTR Gypsy 2389 3089 -3441 9 715 5747 7 0 0 chrUextra 17089965 17090666 -11913990 - QUASIMODO_I LTR Gypsy -830 5230 4530 9 715 285 51 0 0 chrUextra 17090766 17090805 -11913851 + (CAAGA)n Simple_repeat Simple_repeat 5 43 0 9 715 1463 0 6 0 chrUextra 17091567 17091738 -11912918 - SSU-rRNA_Dme rRNA rRNA -1823 172 1 9 715 32 0 0 0 chrUextra 17091871 17091903 -11912753 + AT_rich Low_complexity Low_complexity 1 32 0 9 715 25 0 0 0 chrUextra 17092232 17092257 -11912399 + AT_rich Low_complexity Low_complexity 1 25 0 9 715 5112 23 76 3 chrUextra 17092370 17093069 -11911587 + R1_DM LINE R1 3824 4573 -783 9 715 5771 23 3 0 chrUextra 17093169 17093870 -11910786 + R1_DM LINE R1 4218 4920 -436 9 715 207 42 61 41 chrUextra 17093980 17094029 -11910627 + (TTTTA)n Simple_repeat Simple_repeat 3 52 0 9 715 1176 28 0 0 chrUextra 17094051 17094195 -11910461 + (TTA)n Simple_repeat Simple_repeat 3 146 0 9 715 519 95 53 0 chrUextra 17094203 17094298 -11910358 + Jockey2 LINE Jockey 3321 3420 -8 9 715 723 111 275 0 chrUextra 17094327 17094498 -11910158 - DNAREP1_DM LINE Penelope -175 419 202 9 715 2345 103 17 16 chrUextra 17094774 17095472 -11909184 + DMSAT6 Satellite Satellite 1 698 -51 9 715 5998 1 0 0 chrUextra 17095572 17096273 -11908383 - ROO_I LTR Pao -6320 1936 1236 9 715 1924 13 4 0 chrUextra 17096374 17096604 -11908052 + Copia2_I LTR Copia 893 1123 -3039 9 715 3994 11 0 0 chrUextra 17096599 17097074 -11907582 + Copia2_I LTR Copia 1233 1707 -2455 9 715 1748 144 24 162 chrUextra 17097176 17097872 -11906784 - BATUMI_I LTR Pao -6802 1161 562 9 715 5715 27 0 0 chrUextra 17097975 17098672 -11905984 - R1_DM LINE R1 -1781 3575 2879 9 715 2912 171 30 20 chrUextra 17098777 17099474 -11905182 - SAR_DM Satellite Satellite -523 949 246 9 715 5843 6 6 7 chrUextra 17100378 17101079 -11903577 + DM1731_I LTR Copia 3160 3859 -117 9 715 240 267 0 0 chrUextra 17101399 17101459 -11903197 + TV1I LTR Gypsy 5903 5962 -1 9 715 36 55 0 52 chrUextra 17102032 17102148 -11902508 + AT_rich Low_complexity Low_complexity 1 110 0 9 715 4007 2 0 2 chrUextra 17102221 17102681 -11901975 + SSU-rRNA_Dme rRNA rRNA 1 459 -1536 9 715 1914 5 0 0 chrUextra 17102781 17103001 -11901655 - Invader2_LTR LTR Gypsy -46 220 1 9 715 3855 0 0 0 chrUextra 17103001 17103482 -11901174 - Invader2_I LTR Gypsy 0 4592 4112 9 715 262 191 43 43 chrUextra 17104429 17104544 -11900112 + T-rich Low_complexity Low_complexity 3 117 0 9 715 208 286 8 31 chrUextra 17104727 17104857 -11899799 + (TTTA)n Simple_repeat Simple_repeat 2 128 0 9 715 30 0 0 0 chrUextra 17104900 17104930 -11899726 + AT_rich Low_complexity Low_complexity 1 30 0 9 715 236 231 0 0 chrUextra 17105018 17105083 -11899573 - ROVER-I_DM LTR Gypsy -1746 4838 4774 9 715 5761 17 3 0 chrUextra 17105184 17105885 -11898771 - FW_DM LINE Jockey -957 3735 3033 9 715 2923 175 11 11 chrUextra 17105991 17106686 -11897970 - SAR_DM Satellite Satellite -479 993 299 9 715 2733 195 36 20 chrUextra 17106786 17107487 -11897169 + SAR_DM Satellite Satellite 1 712 -208 9 715 1065 101 0 0 chrUextra 17107587 17107736 -11896920 + Gypsy12_I LTR Gypsy 1673 1821 -3725 9 715 3715 90 47 14 chrUextra 17107733 17108288 -11896368 + Gypsy12_I LTR Gypsy 4465 5037 -509 9 715 2006 271 4 30 chrUextra 17108394 17109089 -11895567 + ROVER-I_DM LTR Gypsy 832 1508 -5076 9 715 3452 62 0 2 chrUextra 17109189 17109677 -11894979 - BATUMI_I LTR Pao -174 7789 7303 9 715 1444 42 11 0 chrUextra 17109700 17109890 -11894766 + BATUMI_I LTR Pao 6427 6618 -1345 9 715 495 94 33 124 chrUextra 17109992 17110113 -11894543 - Gypsy12_I LTR Gypsy -5410 136 27 9 715 1566 185 34 26 chrUextra 17110083 17110466 -11894190 - Gypsy12_LTR LTR Gypsy -1938 398 13 9 715 1321 90 89 9 chrUextra 17110478 17110691 -11893965 - Gypsy12_I LTR Gypsy 0 5546 5317 9 715 496 15 30 0 chrUextra 17110791 17110858 -11893798 - NTS_DM Other Other -134 106 38 9 715 870 9 0 27 chrUextra 17110858 17110970 -11893686 - NTS_DM Other Other -107 133 25 9 715 22 56 0 0 chrUextra 17110996 17111032 -11893624 + AT_rich Low_complexity Low_complexity 1 36 0 9 715 255 125 0 0 chrUextra 17111045 17111085 -11893571 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 715 246 150 0 0 chrUextra 17111128 17111168 -11893488 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 715 27 29 0 0 chrUextra 17111173 17111207 -11893449 + AT_rich Low_complexity Low_complexity 1 34 0 9 715 1868 0 0 0 chrUextra 17111279 17111492 -11893164 - LSU-rRNA_Dme rRNA rRNA 0 3900 3688 9 715 423 101 0 0 chrUextra 17111592 17111661 -11892995 - ARS406_DM Unknown Unknown -284 69 1 9 715 3146 183 10 9 chrUextra 17111599 17112293 -11892363 + SAR_DM Satellite Satellite 224 918 -554 9 715 21 89 0 0 chrUextra 17112712 17112768 -11891888 + AT_rich Low_complexity Low_complexity 1 56 0 9 715 2726 0 3 7 chrUextra 17112787 17113094 -11891562 - SSU-rRNA_Dme rRNA rRNA 0 1995 1690 9 715 3088 105 95 47 chrUextra 17113194 17113765 -11890891 + Gypsy12_I LTR Gypsy 198 795 -4751 9 715 525 60 0 0 chrUextra 17113767 17113834 -11890822 + Gypsy12_I LTR Gypsy 1363 1429 -4117 9 715 378 133 0 16 chrUextra 17113834 17113895 -11890761 + Gypsy12_I LTR Gypsy 457 516 -5030 9 715 6173 9 1 4 chrUextra 17113995 17114696 -11889960 + Invader1_I LTR Gypsy 2259 2957 -229 9 715 2905 200 32 12 chrUextra 17114796 17115497 -11889159 - SAR_DM Satellite Satellite -470 714 1 9 715 5952 0 10 0 chrUextra 17115597 17116298 -11888358 + ROO_I LTR Pao 474 1181 -7075 9 715 6213 4 1 0 chrUextra 17116398 17117099 -11887557 + Invader3_I LTR Gypsy 2965 3666 -1222 9 715 5957 33 0 0 chrUextra 17117202 17117900 -11886756 - DMRT1B LINE R1 -1312 3871 3174 9 715 6411 1 0 0 chrUextra 17118000 17118701 -11885955 - LSU-rRNA_Dme rRNA rRNA -514 3386 2686 9 715 6079 20 0 0 chrUextra 17119602 17120303 -11884353 - R1_DM LINE R1 -817 4539 3839 9 715 847 9 0 44 chrUextra 17120406 17120520 -11884136 - NTS_DM Other Other -107 133 25 9 715 1304 18 0 6 chrUextra 17120572 17120737 -11883919 - NTS_DM Other Other -39 201 38 9 715 907 9 0 27 chrUextra 17120737 17120849 -11883807 - NTS_DM Other Other -107 133 25 9 715 22 56 0 0 chrUextra 17120875 17120911 -11883745 + AT_rich Low_complexity Low_complexity 1 36 0 9 715 269 125 0 0 chrUextra 17120924 17120964 -11883692 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 715 262 150 0 0 chrUextra 17121007 17121047 -11883609 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 715 1515 124 8 20 chrUextra 17121204 17121459 -11883197 + Gypsy12A_LTR LTR Gypsy 2029 2280 0 9 715 2792 85 11 49 chrUextra 17121459 17121905 -11882751 + Gypsy12_I LTR Gypsy 1 429 -5117 9 715 6106 17 0 0 chrUextra 17122005 17122706 -11881950 + FW_DM LINE Jockey 537 1237 -3455 9 715 1353 0 0 0 chrUextra 17122806 17122953 -11881703 - LSU-rRNA_Dme rRNA rRNA -1966 1934 1788 9 715 4344 2 6 10 chrUextra 17122997 17123507 -11881149 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1281 9 715 6092 14 1 1 chrUextra 17123607 17124308 -11880348 + R1_DM LINE R1 3433 4133 -1223 9 715 3018 202 13 21 chrUextra 17124408 17125109 -11879547 + SAR_DM Satellite Satellite 1 695 -203 9 715 21 89 0 0 chrUextra 17125417 17125473 -11879183 + AT_rich Low_complexity Low_complexity 1 56 0 9 715 3753 0 2 5 chrUextra 17125492 17125910 -11878746 - SSU-rRNA_Dme rRNA rRNA 0 1995 1579 9 715 2615 186 8 8 chrUextra 17126016 17126711 -11877945 - SAR_DM Satellite Satellite -749 695 1 9 715 6097 23 0 0 chrUextra 17126811 17127512 -11877144 - R1_DM LINE R1 -511 4845 4145 9 715 3487 85 6 108 chrUextra 17127612 17128308 -11876348 - ROO_I LTR Pao -7072 1184 560 9 715 6218 0 0 0 chrUextra 17128413 17129114 -11875542 + ROVER-I_DM LTR Gypsy 3094 3794 -2790 9 715 1677 0 19 14 chrUextra 17129214 17129425 -11875231 + NTS_DM Other Other 29 240 0 9 715 1926 4 17 13 chrUextra 17129425 17129664 -11874992 + NTS_DM Other Other 1 240 0 9 715 1355 6 0 18 chrUextra 17129664 17129829 -11874827 + NTS_DM Other Other 1 162 -78 9 715 1733 173 38 10 chrUextra 17130024 17130716 -11873940 - SAR_DM Satellite Satellite -514 711 1 9 715 3307 36 0 0 chrUextra 17130823 17131215 -11873441 - STALKER4_LTR LTR Gypsy -10 392 1 9 715 2176 27 17 3 chrUextra 17131215 17131517 -11873139 - STALKER4_I LTR Gypsy 0 6530 6225 9 715 1411 6 0 0 chrUextra 17131617 17131773 -11872883 - LSU-rRNA_Dme rRNA rRNA -1105 2795 2640 9 715 573 0 0 0 chrUextra 17131771 17131834 -11872822 - R1_DM LINE R1 0 5356 5294 9 715 4280 2 0 0 chrUextra 17131847 17132318 -11872338 - R1_DM LINE R1 0 5356 4886 9 715 570 91 73 151 chrUextra 17132448 17132572 -11872084 + MDG1_I LTR Gypsy 6395 6531 -65 9 715 288 0 0 0 chrUextra 17132572 17132604 -11872052 + (TA)n Simple_repeat Simple_repeat 2 33 0 9 715 570 106 65 138 chrUextra 17132604 17132710 -11871946 + MDG1_I LTR Gypsy 6532 6596 0 9 715 1545 22 0 0 chrUextra 17132715 17133119 -11871537 + (TAA)n Simple_repeat Simple_repeat 1 404 0 9 715 6328 1 0 0 chrUextra 17133219 17133920 -11870736 + DOC LINE Jockey 2103 2803 -1922 9 715 6326 0 0 1 chrUextra 17134020 17134721 -11869935 + ROO_I LTR Pao 2184 2883 -5373 9 715 3259 0 5 3 chrUextra 17134821 17135191 -11869465 + LSU-rRNA_Dme rRNA rRNA 1418 1788 -2112 9 715 2641 0 0 0 chrUextra 17135235 17135522 -11869134 + LSU-rRNA_Dme rRNA rRNA 1788 2074 -1826 9 715 6075 0 1 1 chrUextra 17135622 17136323 -11868333 - ROO_I LTR Pao -2978 5278 4578 9 715 6207 1 1 0 chrUextra 17136423 17137124 -11867532 + DOC LINE Jockey 1502 2203 -2522 9 715 6145 1 1 1 chrUextra 17137224 17137925 -11866731 + ROO_I LTR Pao 3540 4240 -4016 9 715 3102 177 27 10 chrUextra 17138025 17138721 -11865935 + SAR_DM Satellite Satellite 287 994 -478 9 715 6250 6 0 0 chrUextra 17138827 17139527 -11865129 + FW_DM LINE Jockey 1549 2248 -2444 9 715 2042 49 0 0 chrUextra 17139627 17139874 -11864782 + IDEFIX_I LTR Gypsy 1628 1874 -3754 9 715 3877 20 0 0 chrUextra 17139868 17140328 -11864328 + IDEFIX_I LTR Gypsy 2009 2468 -3160 9 715 888 274 118 85 chrUextra 17140460 17141129 -11863527 - Gypsy12_LTR LTR Gypsy -1258 1078 388 9 715 3291 173 11 10 chrUextra 17141229 17141930 -11862726 - SAR_DM Satellite Satellite -515 957 256 9 715 5101 45 62 9 chrUextra 17142033 17142731 -11861925 - PROTOP DNA P -3730 750 16 9 715 3291 173 11 9 chrUextra 17142834 17143532 -11861124 + SAR_DM Satellite Satellite 369 1068 -404 9 715 23 68 0 0 chrUextra 17144070 17144114 -11860542 + AT_rich Low_complexity Low_complexity 1 44 0 9 715 26 30 0 0 chrUextra 17144160 17144193 -11860463 + AT_rich Low_complexity Low_complexity 1 33 0 9 715 707 108 0 0 chrUextra 17144435 17144546 -11860110 - ARS406_DM Unknown Unknown -242 111 1 9 715 3113 178 9 8 chrUextra 17144453 17145120 -11859536 + SAR_DM Satellite Satellite 195 862 -610 9 715 394 69 35 0 chrUextra 17145076 17145134 -11859522 - ARS406_DM Unknown Unknown -167 186 127 9 715 3193 171 30 10 chrUextra 17145234 17145924 -11858732 + SAR_DM Satellite Satellite 373 1076 -396 9 715 6191 6 1 1 chrUextra 17146035 17146736 -11857920 + R1_DM LINE R1 3522 4222 -1134 9 715 6257 9 3 0 chrUextra 17146836 17147537 -11857119 + Invader1_I LTR Gypsy 83 785 -2401 9 715 6326 6 0 0 chrUextra 17147637 17148338 -11856318 - Copia2_I LTR Copia -57 4105 3405 9 715 962 73 7 20 chrUextra 17148470 17149139 -11855517 - RSP Satellite Satellite 0 660 1 9 715 1637 5 0 0 chrUextra 17149239 17149428 -11855228 + DM176_LTR LTR Gypsy 319 507 0 9 715 3798 32 0 27 chrUextra 17149428 17149940 -11854716 + DM176_I LTR Gypsy 1 498 -5922 9 715 5746 1 1 36 chrUextra 17150040 17150741 -11853915 + LSU-rRNA_Dme rRNA rRNA 59 735 -3165 9 715 1995 177 23 8 chrUextra 17150844 17151542 -11853114 - SAR_DM Satellite Satellite -511 707 1 9 715 1141 8 0 0 chrUextra 17151642 17151767 -11852889 + R1_DM LINE R1 5232 5356 0 9 715 5245 2 0 0 chrUextra 17151769 17152343 -11852313 + LSU-rRNA_Dme rRNA rRNA 2640 3213 -687 9 715 5902 9 0 1 chrUextra 17152443 17153144 -11851512 - QUASIMODO_I LTR Gypsy -2295 3765 3066 9 715 2924 178 18 22 chrUextra 17153245 17153916 -11850740 + SAR_DM Satellite Satellite 452 1119 -353 9 715 488 204 0 9 chrUextra 17153831 17153945 -11850711 - XDMR_DM Unknown Unknown 0 360 248 9 715 2888 177 9 20 chrUextra 17154045 17154707 -11849949 - SAR_DM Satellite Satellite -626 846 192 9 715 798 119 8 0 chrUextra 17154612 17154746 -11849910 + ARS406_DM Unknown Unknown 1 135 -218 9 715 6306 0 0 3 chrUextra 17155647 17156348 -11848308 + ROO_I LTR Pao 7044 7742 -514 9 715 999 9 0 8 chrUextra 17156486 17156603 -11848053 + RSP Satellite Satellite 1 116 -2 9 715 1019 78 6 17 chrUextra 17156623 17157149 -11847507 + RSP Satellite Satellite 1 520 0 9 715 1496 0 0 0 chrUextra 17157249 17157414 -11847242 - LSU-rRNA_Dme rRNA rRNA -3735 165 1 9 715 21 95 0 0 chrUextra 17157426 17157489 -11847167 + AT_rich Low_complexity Low_complexity 1 63 0 9 715 34 24 0 0 chrUextra 17157702 17157743 -11846913 + AT_rich Low_complexity Low_complexity 1 41 0 9 715 3211 166 19 17 chrUextra 17158051 17158750 -11845906 + SAR_DM Satellite Satellite 295 994 -478 9 715 6365 1 0 1 chrUextra 17158851 17159552 -11845104 - LSU-rRNA_Dme rRNA rRNA -1386 2514 1815 9 715 672 125 0 0 chrUextra 17159652 17159764 -11844892 - ARS406_DM Unknown Unknown -241 112 1 9 715 3154 183 22 4 chrUextra 17159671 17160353 -11844303 + SAR_DM Satellite Satellite 195 888 -584 9 715 395 264 111 93 chrUextra 17160608 17160888 -11843768 + Invader1_LTR LTR Gypsy 84 368 -55 9 715 3134 181 9 20 chrUextra 17161254 17161955 -11842701 - SAR_DM Satellite Satellite -372 1100 408 9 715 767 0 0 0 chrUextra 17162055 17162139 -11842517 - ROVER-I_DM LTR Gypsy -6500 84 1 9 715 1352 58 5 55 chrUextra 17162139 17162340 -11842316 - ROVER-LTR_DM LTR Gypsy 0 367 177 9 715 2082 12 0 0 chrUextra 17162508 17162756 -11841900 - G2_DM LINE Jockey 0 3102 2855 9 715 6257 4 0 1 chrUextra 17162856 17163557 -11841099 + DMRT1A LINE R1 2806 3505 -1678 9 715 6077 6 0 13 chrUextra 17163657 17164358 -11840298 - DOC LINE Jockey -3810 915 224 9 715 425 198 0 10 chrUextra 17164458 17164560 -11840096 + XDMR_DM Unknown Unknown 260 360 0 9 715 2938 185 10 22 chrUextra 17164475 17165159 -11839497 - SAR_DM Satellite Satellite -353 1119 444 9 715 5257 67 36 0 chrUextra 17165260 17165960 -11838696 + QUASIMODO_I LTR Gypsy 405 1129 -4931 9 715 5906 17 0 0 chrUextra 17166060 17166761 -11837895 - QUASIMODO_I LTR Gypsy -4521 1539 839 9 715 5298 41 38 1 chrUextra 17166861 17167514 -11837142 - R1_DM LINE R1 -3959 1397 721 9 715 301 27 0 0 chrUextra 17167525 17167562 -11837094 - R1_DM LINE R1 -4955 401 365 9 715 6337 11 0 1 chrUextra 17167662 17168363 -11836293 + R1_DM LINE R1 1701 2400 -2956 9 715 5848 16 19 0 chrUextra 17168464 17169164 -11835492 + Invader2_I LTR Gypsy 28 740 -3852 9 715 4768 70 58 12 chrUextra 17169271 17169965 -11834691 - R1_DM LINE R1 -2680 2676 2078 9 715 783 0 0 0 chrUextra 17170065 17170152 -11834504 + (GAGAA)n Simple_repeat Simple_repeat 2 88 0 9 716 6490 6 0 0 chrUextra 17170867 17171567 -11833089 - R2_DM LINE R2 -638 2969 2270 9 716 344 190 20 20 chrUextra 17171667 17171769 -11832887 + XDMR_DM Unknown Unknown 259 360 0 9 716 2909 166 48 23 chrUextra 17171683 17172368 -11832288 - SAR_DM Satellite Satellite -353 1119 418 9 716 1013 82 13 22 chrUextra 17172472 17173095 -11831561 + RSP Satellite Satellite 1 617 0 9 716 4975 36 129 0 chrUextra 17173269 17173970 -11830686 + R1_DM LINE R1 1541 2333 -3023 9 716 6276 10 0 1 chrUextra 17174070 17174771 -11829885 + STALKER4_I LTR Gypsy 1667 2366 -4164 9 716 5364 85 13 0 chrUextra 17174871 17175563 -11829093 + Gypsy12_I LTR Gypsy 4195 4895 -651 9 716 6234 3 1 1 chrUextra 17175672 17176373 -11828283 - R1_DM LINE R1 -4067 1289 589 9 716 3446 113 33 62 chrUextra 17176480 17177174 -11827482 - HETA LINE telomeric -4944 1137 254 9 716 623 0 0 0 chrUextra 17177274 17177342 -11827314 - 5S_DM RNA RNA -67 68 1 9 716 1236 7 0 0 chrUextra 17177580 17177715 -11826941 - 5S_DM RNA RNA 0 135 1 9 716 328 0 0 0 chrUextra 17177939 17177975 -11826681 - 5S_DM RNA RNA 0 135 100 9 716 3011 18 8 10 chrUextra 17178075 17178464 -11826192 + STALKER4_I LTR Gypsy 5948 6335 -195 9 716 1057 0 0 20 chrUextra 17178465 17178614 -11826042 - DOC LINE Jockey 0 4725 4580 9 716 1393 0 0 0 chrUextra 17178628 17178776 -11825880 - DOC LINE Jockey -3291 1434 1287 9 716 47 0 0 0 chrUextra 17179412 17179459 -11825197 + AT_rich Low_complexity Low_complexity 1 47 0 9 716 6259 10 0 0 chrUextra 17179677 17180378 -11824278 - STALKER4_I LTR Gypsy -3781 2749 2049 9 716 6267 9 1 0 chrUextra 17180478 17181174 -11823482 - Copia2_I LTR Copia -3465 697 1 9 716 538 50 125 0 chrUextra 17181279 17181359 -11823297 + Gypsy7_I LTR Gypsy 3245 3334 -1650 9 716 2377 35 10 0 chrUextra 17181360 17181650 -11823006 + Gypsy7_I LTR Gypsy 3615 3907 -1077 9 716 1023 170 14 28 chrUextra 17181768 17181980 -11822676 + PROTOP_B DNA P 867 1075 -78 9 716 1527 22 0 11 chrUextra 17182080 17182263 -11822393 - IDEFIX_I LTR Gypsy -5443 185 5 9 716 502 99 0 0 chrUextra 17182398 17182469 -11822187 - STALKER4_LTR LTR Gypsy -331 71 1 9 716 331 146 46 55 chrUextra 17182469 17182578 -11822078 - STALKER4_I LTR Gypsy 0 6530 6423 9 716 1459 16 11 11 chrUextra 17182593 17182781 -11821875 - IDEFIX_LTR LTR Gypsy 0 594 407 9 716 6241 20 1 0 chrUextra 17182881 17183582 -11821074 + R1_DM LINE R1 1619 2320 -3036 9 716 6431 0 4 3 chrUextra 17183682 17184383 -11820273 + NOMAD_I LTR Gypsy 5 706 -5866 9 716 6373 1 1 4 chrUextra 17184483 17185184 -11819472 - LSU-rRNA_Dme rRNA rRNA -2480 1420 722 9 716 2218 28 4 0 chrUextra 17185284 17185538 -11819118 - R1_DM LINE R1 -2680 2676 2422 9 716 1862 19 0 18 chrUextra 17185539 17185757 -11818899 - ACCORD2_LTR LTR Gypsy -1 214 1 9 716 682 70 0 0 chrUextra 17185757 17185841 -11818815 - ACCORD2_I LTR Gypsy -7 7205 7122 9 716 977 44 22 0 chrUextra 17185834 17185971 -11818685 - ACCORD2_I LTR Gypsy -5438 1774 1635 9 716 6175 24 0 1 chrUextra 17186085 17186784 -11817872 + MAX_I LTR Pao 4254 4951 -2963 9 716 5865 37 41 1 chrUextra 17186886 17187587 -11817069 + MAX_I LTR Pao 6552 7280 -634 9 716 5429 7 5 1 chrUextra 17188488 17189162 -11815494 + QUASIMODO_I LTR Gypsy 5385 6060 0 9 716 2549 88 39 23 chrUextra 17189289 17189988 -11814668 + DMSAT6 Satellite Satellite 1 710 -6 9 716 2846 176 19 54 chrUextra 17190090 17190791 -11813865 - SAR_DM Satellite Satellite -382 1090 415 9 716 225 294 99 72 chrUextra 17191199 17191503 -11813153 + Copia2_I LTR Copia 590 901 -3261 9 716 6451 4 0 3 chrUextra 17191692 17192393 -11812263 - R2_DM LINE R2 -570 3037 2339 9 716 5733 0 3 66 chrUextra 17193295 17193995 -11810661 - LSU-rRNA_Dme rRNA rRNA -1821 2079 1424 9 716 2117 9 0 0 chrUextra 17194095 17194327 -11810329 + G6_DM LINE Jockey 646 877 -1165 9 716 4138 0 53 0 chrUextra 17194321 17194796 -11809860 + G6_DM LINE Jockey 1197 1696 -346 9 716 6038 6 60 0 chrUextra 17194896 17195597 -11809059 + FW_DM LINE Jockey 2408 3150 -1542 9 716 3396 167 9 12 chrUextra 17195697 17196388 -11808268 + SAR_DM Satellite Satellite 305 993 -479 9 716 5886 15 0 40 chrUextra 17197299 17198000 -11806656 + CIRCE LINE Composite 150 822 -5534 9 716 1925 100 161 6 chrUextra 17198364 17198705 -11805951 + DNAREP1_DM LINE Penelope 201 594 0 9 716 2863 194 27 21 chrUextra 17198903 17199602 -11805054 - SAR_DM Satellite Satellite -313 1159 457 9 716 943 137 112 44 chrUextra 17199711 17199917 -11804739 + Gypsy12_LTR LTR Gypsy 1267 1486 -850 9 716 726 154 8 0 chrUextra 17199918 17200035 -11804621 + Gypsy12_LTR LTR Gypsy 2145 2262 -18 9 716 802 200 212 34 chrUextra 17200025 17200402 -11804254 + HETA LINE telomeric 5441 5884 -197 9 716 6401 1 0 0 chrUextra 17201303 17202003 -11802653 + G6_DM LINE Jockey 1016 1715 -327 9 716 6083 13 7 9 chrUextra 17202903 17203603 -11801053 + BATUMI_I LTR Pao 1850 2548 -5415 9 716 3848 114 27 26 chrUextra 17203703 17204403 -11800253 - TART LINE telomeric -4691 9786 9086 9 716 3114 191 6 6 chrUextra 17205304 17205967 -11798689 + SAR_DM Satellite Satellite 326 988 -484 9 716 246 28 28 0 chrUextra 17205967 17206003 -11798653 + MAX_LTR LTR Pao 1 37 -284 9 716 1443 17 0 11 chrUextra 17206103 17206281 -11798375 - NTS_DM Other Other -64 176 1 9 716 1972 4 17 13 chrUextra 17206281 17206520 -11798136 - NTS_DM Other Other 0 240 1 9 716 1986 0 17 13 chrUextra 17206520 17206759 -11797897 - NTS_DM Other Other 0 240 1 9 716 3509 3 5 0 chrUextra 17206905 17207293 -11797363 - LSU-rRNA_Dme rRNA rRNA -871 3029 2640 9 716 2909 3 0 0 chrUextra 17207291 17207603 -11797053 - R1_DM LINE R1 0 5356 5045 9 716 662 24 12 0 chrUextra 17207703 17207785 -11796871 + ROO_LTR LTR Pao 346 428 0 9 716 3368 25 16 31 chrUextra 17207785 17208330 -11796326 + ROO_I LTR Pao 1 640 -7616 9 716 411 137 0 0 chrUextra 17208330 17208403 -11796253 + (CAG)n Simple_repeat Simple_repeat 1 73 0 9 716 1579 17 0 0 chrUextra 17208503 17208676 -11795980 + R1_DM LINE R1 5184 5356 0 9 716 3896 63 4 4 chrUextra 17208709 17209203 -11795453 + R1_DM LINE R1 1 494 -4862 9 716 5748 29 4 0 chrUextra 17209303 17210003 -11794653 + PROTOP_A DNA P 317 1019 -86 9 716 1533 11 0 0 chrUextra 17210103 17210278 -11794378 + (TTATA)n Simple_repeat Simple_repeat 4 178 0 9 716 534 57 0 0 chrUextra 17210278 17210348 -11794308 + (TATTG)n Simple_repeat Simple_repeat 2 71 0 9 716 1434 40 0 0 chrUextra 17210364 17210541 -11794115 + (TTATA)n Simple_repeat Simple_repeat 1 177 0 9 716 1566 11 0 0 chrUextra 17210544 17210724 -11793932 + (TATTG)n Simple_repeat Simple_repeat 1 180 0 9 716 193 22 0 98 chrUextra 17210740 17210791 -11793865 + (CATAT)n Simple_repeat Simple_repeat 3 48 0 9 716 869 20 0 0 chrUextra 17210903 17211004 -11793652 + DM176_I LTR Gypsy 6320 6420 0 9 716 4277 10 8 45 chrUextra 17211004 17211531 -11793125 + DM176_LTR LTR Gypsy 1 507 0 9 716 619 28 0 0 chrUextra 17211531 17211603 -11793053 + DM176_I LTR Gypsy 1 72 -6348 9 716 5600 13 40 0 chrUextra 17211703 17212403 -11792253 - DM176_I LTR Gypsy -12 6408 5681 9 716 6415 1 3 3 chrUextra 17212503 17213203 -11791453 + SSU-rRNA_Dme rRNA rRNA 1102 1801 -194 9 716 6374 6 0 1 chrUextra 17213303 17214003 -11790653 - R1_DM LINE R1 -73 5283 4585 9 716 5941 34 1 1 chrUextra 17214103 17214803 -11789853 + R1_DM LINE R1 2257 2956 -2400 9 716 6063 10 0 1 chrUextra 17214903 17215603 -11789053 + STALKER4_I LTR Gypsy 2859 3557 -2973 9 716 6359 7 19 0 chrUextra 17215703 17216403 -11788253 - MDG3_I LTR Gypsy -3591 1395 683 9 716 6599 0 0 0 chrUextra 17216503 17217203 -11787453 + BEL_I LTR Pao 2715 3414 -1990 9 716 3193 120 17 43 chrUextra 17217386 17217970 -11786686 + BATUMI_I LTR Pao 749 1317 -6646 9 716 6316 3 1 4 chrUextra 17218103 17218803 -11785853 - LSU-rRNA_Dme rRNA rRNA -2536 1364 667 9 716 309 175 0 0 chrUextra 17218903 17218960 -11785696 + SAR_DM Satellite Satellite 334 390 -1082 9 716 3589 11 131 8 chrUextra 17218968 17219603 -11785053 - DOC2_DM LINE Jockey 0 4793 4081 9 716 1717 5 0 0 chrUextra 17219703 17219888 -11784768 + LSU-rRNA_Dme rRNA rRNA 2393 2577 -1323 9 716 4504 2 0 2 chrUextra 17219919 17220403 -11784253 + R2_DM LINE R2 1 483 -3124 9 716 6506 0 3 0 chrUextra 17220503 17221203 -11783453 - SSU-rRNA_Dme rRNA rRNA -946 1049 348 9 716 3605 5 7 7 chrUextra 17221403 17221817 -11782839 + DM297_LTR LTR Gypsy 1 414 0 9 716 719 23 11 0 chrUextra 17221817 17221904 -11782752 + DM297_I LTR Gypsy 1 88 -6079 9 716 822 30 10 0 chrUextra 17221904 17222003 -11782653 + DM1731_LTR LTR Copia 1 100 -236 9 716 2747 189 53 16 chrUextra 17222104 17222803 -11781853 + SAR_DM Satellite Satellite 1 724 -244 9 716 6307 1 0 0 chrUextra 17222903 17223603 -11781053 - R1_DM LINE R1 -3156 2200 1501 9 716 6342 4 0 0 chrUextra 17223705 17224403 -11780253 + MAX_I LTR Pao 2348 3045 -4869 9 716 659 257 17 22 chrUextra 17224505 17224736 -11779920 - QUASIMODO_I LTR Gypsy -304 5756 5527 9 716 2328 52 299 5 chrUextra 17224728 17225203 -11779453 + PROTOP_B DNA P 176 835 -318 9 716 2670 0 0 74 chrUextra 17225303 17225641 -11779015 - LSU-rRNA_Dme rRNA rRNA -3587 313 1 9 716 21 95 0 0 chrUextra 17225653 17225716 -11778940 + AT_rich Low_complexity Low_complexity 1 63 0 9 716 34 24 0 0 chrUextra 17225929 17225970 -11778686 + AT_rich Low_complexity Low_complexity 1 41 0 9 716 461 127 0 14 chrUextra 17226903 17226975 -11777681 - Gypsy12_I LTR Gypsy -5017 529 459 9 716 1721 98 54 54 chrUextra 17226988 17227302 -11777354 - Gypsy12_I LTR Gypsy -5206 340 27 9 716 1485 186 36 21 chrUextra 17227272 17227601 -11777055 - Gypsy12_LTR LTR Gypsy -1938 398 65 9 716 6062 23 0 0 chrUextra 17227703 17228403 -11776253 - R1_DM LINE R1 -1577 3779 3080 9 716 877 98 0 0 chrUextra 17228504 17228637 -11776019 - ARS406_DM Unknown Unknown -220 133 1 9 716 2978 184 9 9 chrUextra 17228544 17229202 -11775454 + SAR_DM Satellite Satellite 195 852 -620 9 716 2382 11 0 3 chrUextra 17229303 17229588 -11775068 + IDEFIX_I LTR Gypsy 5345 5628 0 9 716 556 15 0 0 chrUextra 17229588 17229654 -11775002 + IDEFIX_LTR LTR Gypsy 1 66 -528 9 716 1021 151 33 102 chrUextra 17229742 17229986 -11774670 + DMLTR5 LTR Gypsy 40 266 0 9 716 6072 9 0 0 chrUextra 17230103 17230803 -11773853 + ROO_I LTR Pao 3168 3867 -4389 9 716 1811 276 32 44 chrUextra 17230903 17231563 -11773093 + MAX_I LTR Pao 6595 7246 -668 9 716 4675 23 7 10 chrUextra 17230998 17231575 -11773081 - BATUMI_I LTR Pao -962 7001 6427 9 716 3178 176 7 23 chrUextra 17231703 17232401 -11772255 + SAR_DM Satellite Satellite 404 1090 -382 9 716 5940 20 26 0 chrUextra 17232503 17233201 -11771455 - FW_DM LINE Jockey -962 3730 3015 9 716 5917 29 0 1 chrUextra 17234103 17234803 -11769853 - FW_DM LINE Jockey -998 3694 2996 9 716 229 324 40 40 chrUextra 17235217 17235394 -11769262 + Gypsy6_I LTR Gypsy 4538 4714 -2298 9 716 6209 0 1 0 chrUextra 17235703 17236403 -11768253 + FW_DM LINE Jockey 2716 3416 -1276 9 716 6243 1 0 0 chrUextra 17236503 17237203 -11767453 + DM176_I LTR Gypsy 2678 3377 -3043 9 716 1588 6 0 0 chrUextra 17237443 17237617 -11767039 - SSU-rRNA_Dme rRNA rRNA 0 1995 1822 9 716 3453 16 0 0 chrUextra 17237617 17238003 -11766653 - Gypsy6_LTR LTR Gypsy 0 407 22 9 716 3045 191 15 22 chrUextra 17238103 17238803 -11765853 + SAR_DM Satellite Satellite 1 695 -225 9 716 3371 165 10 11 chrUextra 17238909 17239603 -11765053 - SAR_DM Satellite Satellite -425 1047 355 9 716 746 247 53 29 chrUextra 17239704 17239963 -11764693 + Gypsy8_I LTR Gypsy 805 1036 -3311 9 716 237 247 13 13 chrUextra 17240001 17240079 -11764577 + Gypsy8_I LTR Gypsy 2746 2823 -3830 9 716 2781 13 3 0 chrUextra 17240085 17240403 -11764253 + STALKER4_LTR LTR Gypsy 1 319 -83 9 716 734 0 12 0 chrUextra 17240503 17240587 -11764069 + LSU-rRNA_Dme rRNA rRNA 3816 3900 0 9 716 22 56 0 0 chrUextra 17240659 17240695 -11763961 + AT_rich Low_complexity Low_complexity 1 36 0 9 716 262 150 0 0 chrUextra 17240700 17240740 -11763916 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 716 262 150 0 0 chrUextra 17240792 17240832 -11763824 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 716 262 150 0 0 chrUextra 17240884 17240924 -11763732 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 716 269 125 0 0 chrUextra 17240967 17241007 -11763649 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 716 22 56 0 0 chrUextra 17241020 17241056 -11763600 + AT_rich Low_complexity Low_complexity 1 36 0 9 716 907 9 0 27 chrUextra 17241082 17241194 -11763462 + NTS_DM Other Other 25 133 -107 9 716 3095 183 9 19 chrUextra 17241303 17242003 -11762653 - SAR_DM Satellite Satellite -371 1101 409 9 716 1012 22 0 7 chrUextra 17242104 17242242 -11762414 + NTS_DM Other Other 65 201 -39 9 716 907 9 0 27 chrUextra 17242294 17242406 -11762250 + NTS_DM Other Other 25 133 -107 9 716 1304 18 0 6 chrUextra 17242406 17242571 -11762085 + NTS_DM Other Other 38 201 -39 9 716 889 18 0 27 chrUextra 17242623 17242735 -11761921 + NTS_DM Other Other 25 133 -107 9 716 614 0 0 0 chrUextra 17242735 17242803 -11761853 + NTS_DM Other Other 38 105 -135 9 716 1862 36 8 27 chrUextra 17242903 17243160 -11761496 + BATUMI_I LTR Pao 7033 7284 -679 9 716 2578 81 88 29 chrUextra 17243160 17243603 -11761053 + BATUMI_I LTR Pao 1 469 -7494 9 716 3212 179 7 7 chrUextra 17243703 17244391 -11760265 + SAR_DM Satellite Satellite 389 1076 -396 9 716 2333 197 75 25 chrUextra 17244503 17245181 -11759475 - SAR_DM Satellite Satellite -704 768 57 9 716 5927 14 39 0 chrUextra 17246103 17246803 -11757853 + Invader4_I LTR Gypsy 1078 1804 -609 9 716 6364 4 0 0 chrUextra 17246903 17247603 -11757053 - DM1731_I LTR Copia -1969 2007 1308 9 716 6039 7 40 0 chrUextra 17247703 17248403 -11756253 + Invader4_I LTR Gypsy 1122 1849 -564 9 716 576 81 0 0 chrUextra 17248503 17248590 -11756066 + (TAA)n Simple_repeat Simple_repeat 2 88 0 9 716 186 0 98 39 chrUextra 17248619 17248670 -11755986 + (TATAA)n Simple_repeat Simple_repeat 2 55 0 9 716 24 67 0 0 chrUextra 17248675 17248720 -11755936 + AT_rich Low_complexity Low_complexity 1 45 0 9 716 1239 88 0 9 chrUextra 17248774 17249203 -11755453 + (TAA)n Simple_repeat Simple_repeat 1 425 0 9 716 1962 30 0 8 chrUextra 17249305 17249541 -11755115 - CIRCE LINE Composite -695 5661 5428 9 716 2914 20 3 45 chrUextra 17249628 17250003 -11754653 - CIRCE LINE Composite -929 5427 5069 9 716 2435 56 65 0 chrUextra 17250106 17250427 -11754229 + TART LINE telomeric 1518 1859 -12618 9 716 2992 55 18 0 chrUextra 17250418 17250803 -11753853 + TART LINE telomeric 2045 2436 -12041 9 716 6055 23 4 0 chrUextra 17250903 17251603 -11753053 - R1_DM LINE R1 -1561 3795 3093 9 716 2238 83 12 0 chrUextra 17251703 17252042 -11752614 + MDG1_I LTR Gypsy 796 1138 -5458 9 716 1964 73 3 0 chrUextra 17252114 17252402 -11752254 + MDG1_I LTR Gypsy 1134 1422 -5174 9 716 3027 182 7 22 chrUextra 17252503 17253194 -11751462 + SAR_DM Satellite Satellite 438 1118 -354 9 716 297 188 0 0 chrUextra 17253139 17253203 -11751453 - XDMR Unknown Unknown 0 361 298 9 716 591 0 0 0 chrUextra 17253303 17253367 -11751289 - NTS_DM Other Other -176 64 1 9 716 1896 4 17 17 chrUextra 17253367 17253607 -11751049 - NTS_DM Other Other 0 240 1 9 716 1922 4 17 13 chrUextra 17253607 17253846 -11750810 - NTS_DM Other Other 0 240 1 9 716 1033 20 25 25 chrUextra 17253846 17254003 -11750653 - NTS_DM Other Other 0 240 84 9 716 6260 0 3 4 chrUextra 17254103 17254803 -11749853 - SSU-rRNA_Dme rRNA rRNA -181 1814 1116 9 716 6082 9 1 0 chrUextra 17254903 17255603 -11749053 - ROO_I LTR Pao -5989 2267 1567 9 716 6289 7 0 1 chrUextra 17255703 17256403 -11748253 - MICROPIA_I LTR Gypsy -3362 1114 416 9 716 843 102 0 14 chrUextra 17256559 17256840 -11747816 - RSP Satellite Satellite 0 277 1 9 716 856 85 0 14 chrUextra 17256880 17257160 -11747496 - RSP Satellite Satellite -1 276 1 9 716 6149 0 1 0 chrUextra 17257303 17258003 -11746653 + ROO_I LTR Pao 3081 3781 -4475 9 716 817 10 0 30 chrUextra 17258103 17258204 -11746452 - NTS_DM Other Other -118 122 25 9 716 1304 18 0 6 chrUextra 17258256 17258421 -11746235 - NTS_DM Other Other -39 201 38 9 716 881 18 0 27 chrUextra 17258421 17258533 -11746123 - NTS_DM Other Other -107 133 25 9 716 1304 18 0 6 chrUextra 17258585 17258750 -11745906 - NTS_DM Other Other -39 201 38 9 716 419 0 0 0 chrUextra 17258750 17258803 -11745853 - NTS_DM Other Other -107 133 81 9 716 5410 23 43 17 chrUextra 17258903 17259603 -11745053 + ROO_I LTR Pao 3225 3942 -4314 9 716 4679 0 4 2 chrUextra 17259703 17260222 -11744434 + LSU-rRNA_Dme rRNA rRNA 3381 3900 0 9 716 22 56 0 0 chrUextra 17260294 17260330 -11744326 + AT_rich Low_complexity Low_complexity 1 36 0 9 716 262 150 0 0 chrUextra 17260335 17260375 -11744281 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 716 5861 16 0 0 chrUextra 17260503 17261203 -11743453 - PROTOP_A DNA P -150 955 256 9 716 3144 167 10 13 chrUextra 17261306 17262003 -11742653 - SAR_DM Satellite Satellite -711 694 1 9 716 3336 172 9 10 chrUextra 17262105 17262803 -11741853 + SAR_DM Satellite Satellite 332 1028 -444 9 716 6256 6 0 1 chrUextra 17262903 17263603 -11741053 + R1_DM LINE R1 4584 5282 -74 9 716 6219 6 11 0 chrUextra 17263703 17264403 -11740253 - R1_DM LINE R1 -2988 2368 1661 9 716 313 26 0 0 chrUextra 17264503 17264542 -11740114 + NTS_DM Other Other 163 201 -39 9 716 21 57 0 0 chrUextra 17264542 17264577 -11740079 + AT_rich Low_complexity Low_complexity 1 35 0 9 716 834 9 9 44 chrUextra 17264603 17264716 -11739940 + NTS_DM Other Other 25 133 -107 9 716 821 0 0 10 chrUextra 17264716 17264813 -11739843 + NTS_DM Other Other 38 133 -107 9 716 1451 25 20 20 chrUextra 17264813 17265016 -11739640 + NTS_DM Other Other 38 240 0 9 716 1521 21 0 5 chrUextra 17265016 17265203 -11739453 + NTS_DM Other Other 1 186 -54 9 716 6234 6 10 0 chrUextra 17265303 17266003 -11738653 - DOC2_DM LINE Jockey -1852 2941 2235 9 716 845 10 0 29 chrUextra 17266103 17266207 -11738449 - NTS_DM Other Other -115 125 25 9 716 22 56 0 0 chrUextra 17266233 17266269 -11738387 + AT_rich Low_complexity Low_complexity 1 36 0 9 716 239 125 0 24 chrUextra 17266282 17266323 -11738333 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 716 262 150 0 0 chrUextra 17266366 17266406 -11738250 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 716 262 150 0 0 chrUextra 17266458 17266498 -11738158 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 716 262 150 0 0 chrUextra 17266550 17266590 -11738066 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 716 22 56 0 0 chrUextra 17266595 17266631 -11738025 + AT_rich Low_complexity Low_complexity 1 36 0 9 716 918 0 0 0 chrUextra 17266703 17266803 -11737853 - LSU-rRNA_Dme rRNA rRNA 0 3900 3801 9 716 3080 179 9 22 chrUextra 17266922 17267603 -11737053 - SAR_DM Satellite Satellite -371 1101 430 9 716 356 265 114 96 chrUextra 17267975 17268255 -11736401 - Invader1_LTR LTR Gypsy -55 368 84 9 716 5823 20 64 0 chrUextra 17268503 17269203 -11735453 + R1_DM LINE R1 2885 3629 -1727 9 716 22 56 0 0 chrUextra 17269646 17269682 -11734974 + AT_rich Low_complexity Low_complexity 1 36 0 9 716 534 273 88 8 chrUextra 17269682 17269993 -11734663 + IDEFIX_I LTR Gypsy 2541 3061 -2902 9 716 6279 4 1 3 chrUextra 17270103 17270803 -11733853 - SSU-rRNA_Dme rRNA rRNA -267 1728 1030 9 716 6243 0 6 1 chrUextra 17270903 17271603 -11733053 + ROO_I LTR Pao 5090 5792 -2464 9 716 2343 132 21 10 chrUextra 17271703 17272400 -11732256 - DMSAT6 Satellite Satellite -22 705 1 9 716 2180 107 53 3 chrUextra 17272504 17272843 -11731813 + Invader1_LTR LTR Gypsy 68 423 0 9 716 697 163 158 124 chrUextra 17272879 17273201 -11731455 - HMSBEAGLE_I LTR Gypsy -5891 638 306 9 716 2980 179 20 14 chrUextra 17273311 17273999 -11730657 - SAR_DM Satellite Satellite -569 903 212 9 716 6401 3 0 0 chrUextra 17274103 17274803 -11729853 - SSU-rRNA_Dme rRNA rRNA -1149 846 147 9 716 5942 31 0 0 chrUextra 17274903 17275603 -11729053 + MDG1_I LTR Gypsy 3571 4270 -2326 9 716 514 119 36 0 chrUextra 17275964 17276048 -11728608 - NTS_DM Other Other -150 90 4 9 716 1318 6 6 18 chrUextra 17276158 17276322 -11728334 - NTS_DM Other Other -78 162 1 9 716 555 0 49 37 chrUextra 17276322 17276403 -11728253 - NTS_DM Other Other 0 240 159 9 716 6031 6 0 0 chrUextra 17276503 17277203 -11727453 + Invader2_I LTR Gypsy 3061 3760 -832 9 716 1679 0 5 0 chrUextra 17277304 17277490 -11727166 + R1_DM LINE R1 5170 5356 0 9 716 4671 4 0 0 chrUextra 17277488 17278003 -11726653 + LSU-rRNA_Dme rRNA rRNA 2640 3154 -746 9 716 6016 7 1 0 chrUextra 17278103 17278803 -11725853 - DM1731_I LTR Copia -2092 1884 1184 9 716 5837 20 1 0 chrUextra 17278903 17279603 -11725053 + MDG1_I LTR Gypsy 3819 4519 -2077 9 716 5969 1 0 0 chrUextra 17279703 17280403 -11724253 - DM176_I LTR Gypsy -769 5651 4952 9 716 3282 166 7 9 chrUextra 17280503 17281200 -11723456 + SAR_DM Satellite Satellite 352 1047 -425 9 716 21 89 0 0 chrUextra 17281421 17281477 -11723179 + AT_rich Low_complexity Low_complexity 1 56 0 9 716 4432 2 2 0 chrUextra 17281496 17282003 -11722653 - SSU-rRNA_Dme rRNA rRNA 0 1995 1488 9 716 5378 44 0 0 chrUextra 17282903 17283602 -11721054 + IDEFIX_I LTR Gypsy 825 1523 -4105 9 716 807 21 0 0 chrUextra 17283703 17283800 -11720856 + (CTTAT)n Simple_repeat Simple_repeat 3 99 0 9 716 5947 9 0 0 chrUextra 17284503 17285203 -11719453 + FW_DM LINE Jockey 1272 1971 -2721 9 716 406 0 37 0 chrUextra 17285321 17285375 -11719281 + (TA)n Simple_repeat Simple_repeat 2 57 0 9 716 4668 2 0 0 chrUextra 17285472 17286003 -11718653 + SSU-rRNA_Dme rRNA rRNA 1 531 -1464 9 716 5900 4 0 6 chrUextra 17286103 17286803 -11717853 + Gypsy4_I LTR Gypsy 1390 2085 -4203 9 716 2009 181 50 30 chrUextra 17286903 17287428 -11717228 - Stalker2_I LTR Gypsy -6577 825 291 9 716 1244 20 0 0 chrUextra 17287455 17287603 -11717053 - STALKER4_LTR LTR Gypsy -53 349 202 9 716 3095 172 13 10 chrUextra 17287703 17288403 -11716253 - SAR_DM Satellite Satellite -467 1005 304 9 716 6054 3 0 0 chrUextra 17288503 17289203 -11715453 + R1_DM LINE R1 2120 2819 -2537 9 716 1091 0 0 0 chrUextra 17289303 17289431 -11715225 + R1_DM LINE R1 4928 5055 -301 9 716 762 43 0 0 chrUextra 17289430 17289524 -11715132 + R1_DM LINE R1 5263 5356 0 9 716 3215 65 9 5 chrUextra 17289557 17290003 -11714653 + R1_DM LINE R1 1 448 -4908 9 716 3024 177 8 5 chrUextra 17290103 17290762 -11713894 + SAR_DM Satellite Satellite 231 891 -581 9 716 6034 3 0 0 chrUextra 17290903 17291603 -11713053 + Invader3_I LTR Gypsy 3225 3924 -964 9 716 2558 202 36 6 chrUextra 17292503 17293201 -11711455 - SAR_DM Satellite Satellite -526 946 228 9 716 2990 6 6 0 chrUextra 17293303 17293667 -11710989 + Invader4_I LTR Gypsy 2048 2413 0 9 716 2898 3 0 3 chrUextra 17293667 17294003 -11710653 + Invader4_LTR LTR Gypsy 1 335 -11 9 716 5965 0 4 3 chrUextra 17294104 17294803 -11709853 + SSU-rRNA_Dme rRNA rRNA 697 1396 -599 9 716 687 191 0 0 chrUextra 17295703 17295850 -11708806 + SAR_DM Satellite Satellite 604 750 -722 9 716 3362 15 152 9 chrUextra 17295857 17296403 -11708253 - DOC2_DM LINE Jockey 0 4793 4170 9 716 4972 96 0 0 chrUextra 17296503 17297203 -11707453 + Gypsy12_I LTR Gypsy 3240 3939 -1607 9 716 1620 25 0 0 chrUextra 17297303 17297712 -11706944 + (CAAGA)n Simple_repeat Simple_repeat 1 409 0 9 716 375 113 0 0 chrUextra 17297718 17297780 -11706876 + (ACATG)n Simple_repeat Simple_repeat 5 66 0 9 716 1593 0 0 0 chrUextra 17297780 17297957 -11706699 + (CAAGA)n Simple_repeat Simple_repeat 1 177 0 9 716 312 91 0 0 chrUextra 17297959 17298003 -11706653 + (ACATG)n Simple_repeat Simple_repeat 2 45 0 9 716 201 121 0 0 chrUextra 17298401 17298434 -11706222 + (TC)n Simple_repeat Simple_repeat 1 33 0 9 716 987 8 0 8 chrUextra 17298903 17299024 -11705632 - Gypsy4_LTR LTR Gypsy -167 120 1 9 716 3526 37 0 11 chrUextra 17299029 17299497 -11705159 - IDEFIX_LTR LTR Gypsy 0 594 132 9 716 682 75 75 0 chrUextra 17299496 17299603 -11705053 - IDEFIX_I LTR Gypsy -558 5070 4956 9 716 928 8 0 24 chrUextra 17300503 17300627 -11704029 + NTS_DM Other Other 42 162 -78 9 716 488 119 36 0 chrUextra 17300737 17300821 -11703835 + NTS_DM Other Other 4 90 -150 9 716 28 48 0 0 chrUextra 17301094 17301136 -11703520 + AT_rich Low_complexity Low_complexity 1 42 0 9 89 5917 10 1 0 chrUextra 17301303 17302003 -11702653 + FW_DM LINE Jockey 3647 4347 -345 9 717 438 52 0 0 chrUextra 17302103 17302161 -11702495 + ARS406_DM Unknown Unknown 132 189 -164 9 717 3162 283 43 26 chrUextra 17302111 17303602 -11701054 - SAR_DM Satellite Satellite -255 1516 1 9 717 693 110 0 8 chrUextra 17303703 17303822 -11700834 - ARS406_DM Unknown Unknown -235 118 1 9 717 2806 189 5 14 chrUextra 17303728 17304397 -11700259 + SAR_DM Satellite Satellite 195 857 -615 9 717 295 62 42 0 chrUextra 17304355 17304403 -11700253 - ARS406_DM Unknown Unknown -164 189 140 9 717 3286 0 0 5 chrUextra 17304503 17304886 -11699770 + LSU-rRNA_Dme rRNA rRNA 3520 3900 0 9 717 22 56 0 0 chrUextra 17304958 17304994 -11699662 + AT_rich Low_complexity Low_complexity 1 36 0 9 717 246 150 0 0 chrUextra 17304999 17305039 -11699617 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 717 246 150 0 0 chrUextra 17305091 17305131 -11699525 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 717 2685 186 15 19 chrUextra 17306105 17306803 -11697853 + SAR_DM Satellite Satellite 1 695 -300 9 717 5575 36 9 0 chrUextra 17306903 17307603 -11697053 - R1_DM LINE R1 -1870 3486 2781 9 717 5978 6 0 1 chrUextra 17307703 17308403 -11696253 + DMRT1A LINE R1 3871 4569 -614 9 717 509 200 0 0 chrUextra 17308503 17308613 -11696043 + SAR_DM Satellite Satellite 614 723 -749 9 717 2464 175 9 11 chrUextra 17308644 17309199 -11695457 + SAR_DM Satellite Satellite 326 879 -593 9 717 3212 169 9 7 chrUextra 17309303 17309996 -11694660 + SAR_DM Satellite Satellite 383 1076 -396 9 717 4883 97 0 0 chrUextra 17310903 17311603 -11693053 + R1_DM LINE R1 1208 1907 -3449 9 717 2889 178 13 9 chrUextra 17311706 17312381 -11692275 - SAR_DM Satellite Satellite -549 923 246 9 717 365 113 0 0 chrUextra 17312341 17312403 -11692253 + ARS406_DM Unknown Unknown 1 62 -291 9 717 3085 178 9 6 chrUextra 17313314 17314003 -11690653 - SAR_DM Satellite Satellite -535 937 247 9 717 24 32 0 0 chrUextra 17314509 17314540 -11690116 + AT_rich Low_complexity Low_complexity 1 31 0 9 717 781 114 0 0 chrUextra 17314903 17315034 -11689622 - ARS406_DM Unknown Unknown -222 131 1 9 717 2957 183 7 6 chrUextra 17314928 17315600 -11689056 + SAR_DM Satellite Satellite 180 852 -620 9 717 277 279 58 0 chrUextra 17315924 17316028 -11688628 + NINJA_I LTR Pao 4451 4560 -1451 9 717 5929 1 1 0 chrUextra 17316503 17317203 -11687453 + DOC LINE Jockey 1557 2257 -2468 9 717 2704 189 6 19 chrUextra 17317303 17317973 -11686683 + SAR_DM Satellite Satellite 459 1119 -353 9 717 441 204 0 17 chrUextra 17317887 17318002 -11686654 - XDMR_DM Unknown Unknown 0 360 248 9 717 2218 170 7 17 chrUextra 17318103 17318803 -11685853 - SAR_DM Satellite Satellite -471 692 1 9 717 2315 93 19 30 chrUextra 17318915 17319603 -11685053 - DMSAT6 Satellite Satellite -120 680 1 9 717 798 74 0 8 chrUextra 17319703 17319825 -11684831 - ARS406_DM Unknown Unknown -232 121 1 9 717 2980 164 12 15 chrUextra 17319735 17320402 -11684254 + SAR_DM Satellite Satellite 198 862 -610 9 717 5934 1 1 0 chrUextra 17320503 17321203 -11683453 - ROO_I LTR Pao -3752 4504 3804 9 717 5046 49 3 16 chrUextra 17321303 17322003 -11682653 + BATUMI_I LTR Pao 3099 3789 -4174 9 717 1242 0 0 0 chrUextra 17322103 17322246 -11682410 - IDEFIX_I LTR Gypsy -5485 143 1 9 717 25 0 0 0 chrUextra 17322666 17322691 -11681965 + AT_rich Low_complexity Low_complexity 1 25 0 9 717 1009 95 20 45 chrUextra 17322935 17323134 -11681522 + TART LINE telomeric 10470 10663 -3814 9 717 421 60 88 15 chrUextra 17323132 17323200 -11681456 + TAHRE LINE telomeric 10380 10452 -11 9 717 1415 146 13 152 chrUextra 17323200 17323596 -11681060 + TART LINE telomeric 6985 7325 -7152 9 717 6007 1 0 0 chrUextra 17323721 17324403 -11680253 + HOBO DNA hAT 1 682 -2334 9 717 2972 249 28 17 chrUextra 17324503 17326003 -11678653 - SAR_DM Satellite Satellite -217 1515 1 9 717 423 101 0 0 chrUextra 17326103 17326172 -11678484 - ARS406_DM Unknown Unknown -284 69 1 9 717 2163 193 8 6 chrUextra 17326110 17326636 -11678020 + SAR_DM Satellite Satellite 224 750 -722 9 717 1225 19 0 0 chrUextra 17326644 17326803 -11677853 - DOC2_DM LINE Jockey 0 4793 4635 9 717 21 89 0 0 chrUextra 17326985 17327041 -11677615 + AT_rich Low_complexity Low_complexity 1 56 0 9 717 4755 0 2 0 chrUextra 17327060 17327603 -11677053 - SSU-rRNA_Dme rRNA rRNA 0 1995 1452 9 717 5914 11 0 0 chrUextra 17327703 17328403 -11676253 - ROO_I LTR Pao -2436 5820 5121 9 717 1584 169 50 7 chrUextra 17328503 17329203 -11675453 + SAR_DM Satellite Satellite 1 729 -754 9 717 5691 20 1 1 chrUextra 17329303 17330003 -11674653 + R1_DM LINE R1 3282 3981 -1375 9 717 2987 179 7 9 chrUextra 17330103 17330783 -11673873 - SAR_DM Satellite Satellite -599 873 195 9 717 673 106 0 9 chrUextra 17330689 17330803 -11673853 + ARS406_DM Unknown Unknown 1 113 -240 9 717 4808 22 3 3 chrUextra 17330905 17331498 -11673158 + R1_DM LINE R1 4764 5356 0 9 717 519 44 0 0 chrUextra 17331531 17331599 -11673057 + R1_DM LINE R1 1 68 -5288 9 717 2699 195 31 11 chrUextra 17331703 17332403 -11672253 + SAR_DM Satellite Satellite 1 714 -396 9 717 6004 11 0 0 chrUextra 17332503 17333203 -11671453 + Copia2_I LTR Copia 2993 3692 -470 9 717 2896 179 11 19 chrUextra 17333307 17334003 -11670653 - SAR_DM Satellite Satellite -361 1111 421 9 717 244 0 0 0 chrUextra 17334103 17334132 -11670524 + STALKER4_I LTR Gypsy 6502 6530 0 9 717 3449 2 0 2 chrUextra 17334132 17334535 -11670121 + STALKER4_LTR LTR Gypsy 1 402 0 9 717 1738 58 91 0 chrUextra 17334562 17334803 -11669853 - R1_DM LINE R1 -3787 1569 1307 9 717 5390 31 7 0 chrUextra 17334903 17335602 -11669054 - Invader2_I LTR Gypsy -2211 2381 1678 9 717 5836 13 1 1 chrUextra 17335702 17336401 -11668255 - STALKER4_I LTR Gypsy -1670 4860 4162 9 717 1732 0 14 0 chrUextra 17336507 17336719 -11667937 - NTS_DM Other Other -25 215 1 9 717 1861 0 17 13 chrUextra 17336719 17336958 -11667698 - NTS_DM Other Other 0 240 1 9 717 1813 4 21 13 chrUextra 17336958 17337196 -11667460 - NTS_DM Other Other 0 240 1 9 717 5103 29 44 0 chrUextra 17337300 17337999 -11666657 - R2_DM LINE R2 -1656 1951 1222 9 717 4787 10 3 11 chrUextra 17338190 17338798 -11665858 + STALKER4_I LTR Gypsy 1064 1666 -4864 9 717 5993 3 0 1 chrUextra 17338898 17339597 -11665059 - DOC LINE Jockey -955 3770 3073 9 717 6075 1 0 0 chrUextra 17339697 17340396 -11664260 - DOC LINE Jockey -897 3828 3130 9 717 1737 47 172 0 chrUextra 17340894 17341149 -11663507 + PROTOP DNA P 1 299 -4181 9 717 383 17 52 0 chrUextra 17341136 17341194 -11663462 + PROTOP DNA P 522 582 -3898 9 717 2320 93 13 43 chrUextra 17341297 17341994 -11662662 - DMSAT6 Satellite Satellite -28 675 1 9 717 4369 8 21 4 chrUextra 17342266 17342791 -11661865 + Copia2_I LTR Copia 3526 4059 -103 9 717 5903 7 1 3 chrUextra 17342893 17343592 -11661064 + R2_DM LINE R2 2522 3219 -388 9 717 2978 201 13 20 chrUextra 17343697 17344391 -11660265 - SAR_DM Satellite Satellite -569 689 1 9 717 3012 168 16 14 chrUextra 17344491 17345190 -11659466 - SAR_DM Satellite Satellite -572 900 201 9 717 5874 4 0 0 chrUextra 17345290 17345988 -11658668 - ROO_I LTR Pao -4414 3842 3145 9 717 5716 10 1 0 chrUextra 17346089 17346788 -11657868 - R1_DM LINE R1 -4224 1132 433 9 717 2796 6 3 0 chrUextra 17346888 17347224 -11657432 - TAHRE LINE telomeric -2982 7481 7145 9 717 2932 14 30 0 chrUextra 17347222 17347587 -11657069 - TAHRE LINE telomeric -8 10455 10080 9 717 5967 1 0 0 chrUextra 17347687 17348386 -11656270 + ROO_I LTR Pao 3616 4314 -3942 9 717 5964 1 1 1 chrUextra 17348486 17349185 -11655471 + R1_DM LINE R1 1511 2209 -3147 9 717 2915 182 6 15 chrUextra 17350085 17350769 -11653887 + SAR_DM Satellite Satellite 399 1076 -396 9 717 2349 184 6 4 chrUextra 17350892 17351420 -11653236 + SAR_DM Satellite Satellite 237 765 -707 9 717 1363 12 0 0 chrUextra 17351419 17351582 -11653074 + DM1731_LTR LTR Copia 1 163 -173 9 717 5847 19 0 0 chrUextra 17351682 17352381 -11652275 + R1_DM LINE R1 3975 4673 -683 9 717 775 10 0 30 chrUextra 17352481 17352581 -11652075 - NTS_DM Other Other -119 121 25 9 717 22 56 0 0 chrUextra 17352607 17352643 -11652013 + AT_rich Low_complexity Low_complexity 1 36 0 9 717 225 125 0 24 chrUextra 17352656 17352697 -11651959 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 717 246 150 0 0 chrUextra 17352740 17352780 -11651876 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 717 246 150 0 0 chrUextra 17352832 17352872 -11651784 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 717 246 150 0 0 chrUextra 17352924 17352964 -11651692 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 717 22 56 0 0 chrUextra 17352969 17353005 -11651651 + AT_rich Low_complexity Low_complexity 1 36 0 9 717 906 0 0 0 chrUextra 17353077 17353180 -11651476 - LSU-rRNA_Dme rRNA rRNA 0 3900 3798 9 717 657 236 156 46 chrUextra 17353575 17353903 -11650753 - GTWIN_LTR LTR Gypsy -90 405 42 9 717 255 159 0 100 chrUextra 17353906 17353976 -11650680 - Gypsy_DS LTR Gypsy -582 6940 6878 9 717 3958 24 56 0 chrUextra 17354079 17354614 -11650042 + ROO_I LTR Pao 4722 5286 -2970 9 717 1386 55 0 0 chrUextra 17354596 17354778 -11649878 + ROO_I LTR Pao 5432 5613 -2643 9 717 1279 13 0 0 chrUextra 17354878 17355028 -11649628 + G_DM LINE Jockey 1067 1216 -3130 9 717 4625 9 4 0 chrUextra 17355027 17355577 -11649079 + G_DM LINE Jockey 1342 1893 -2453 9 717 5599 36 16 0 chrUextra 17355677 17356376 -11648280 - R1_DM LINE R1 -3326 2030 1321 9 717 5878 3 0 0 chrUextra 17356476 17357175 -11647481 + LSU-rRNA_Dme rRNA rRNA 246 944 -2956 9 717 5530 17 3 0 chrUextra 17357275 17357974 -11646682 - Invader2_I LTR Gypsy -2381 2211 1511 9 717 3247 163 19 7 chrUextra 17358075 17358773 -11645883 + SAR_DM Satellite Satellite 332 1037 -435 9 717 246 150 0 0 chrUextra 17359019 17359059 -11645597 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 717 246 150 0 0 chrUextra 17359111 17359151 -11645505 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 9 717 22 56 0 0 chrUextra 17359156 17359192 -11645464 + AT_rich Low_complexity Low_complexity 1 36 0 9 717 2664 3 0 0 chrUextra 17359264 17359572 -11645084 - LSU-rRNA_Dme rRNA rRNA 0 3900 3593 9 717 3122 130 26 41 chrUextra 17359675 17360339 -11644317 + TART LINE telomeric 9523 10176 -4301 9 717 832 9 9 27 chrUextra 17361312 17361423 -11643233 + NTS_DM Other Other 25 133 -107 9 717 787 0 0 10 chrUextra 17361423 17361520 -11643136 + NTS_DM Other Other 38 133 -107 9 717 1408 20 20 20 chrUextra 17361520 17361723 -11642933 + NTS_DM Other Other 38 240 0 9 717 1713 25 17 17 chrUextra 17361723 17361963 -11642693 + NTS_DM Other Other 1 240 0 9 717 35 24 0 0 chrUextra 17362309 17362351 -11642305 + AT_rich Low_complexity Low_complexity 1 42 0 9 717 352 0 42 0 chrUextra 17362570 17362618 -11642038 + (TA)n Simple_repeat Simple_repeat 2 51 0 9 717 462 0 0 0 chrUextra 17362715 17362768 -11641888 + SSU-rRNA_Dme rRNA rRNA 1 53 -1942 9 717 21 0 0 0 chrUextra 17362953 17362974 -11641682 + AT_rich Low_complexity Low_complexity 1 21 0 9 717 2596 28 3 0 chrUextra 17363667 17363984 -11640672 + Gypsy_LTR LTR Gypsy 165 482 0 9 717 3191 62 43 87 chrUextra 17364466 17365119 -11639537 - BATUMI_I LTR Pao -6772 1191 568 9 717 4070 10 0 2 chrUextra 17365265 17365747 -11638909 + R1_DM LINE R1 4876 5356 0 9 717 1913 5 0 0 chrUextra 17365745 17365964 -11638692 + LSU-rRNA_Dme rRNA rRNA 2640 2858 -1042 9 717 6060 4 0 0 chrUextra 17366064 17366763 -11637893 + LSU-rRNA_Dme rRNA rRNA 1892 2590 -1310 9 717 3263 5 0 0 chrUextra 17366863 17367242 -11637414 + R1_DM LINE R1 4978 5356 0 9 717 2751 9 0 0 chrUextra 17367240 17367562 -11637094 + LSU-rRNA_Dme rRNA rRNA 2640 2961 -939 9 717 5589 29 0 0 chrUextra 17367664 17368361 -11636295 - MDG1_I LTR Gypsy -1622 4974 4278 9 717 262 106 0 21 chrUextra 17368886 17368934 -11635722 - HMSBEAGLE_I LTR Gypsy -6308 221 175 9 717 351 49 65 16 chrUextra 17368956 17369018 -11635638 - HMSBEAGLE_I LTR Gypsy -6464 65 1 9 717 684 190 0 7 chrUextra 17369017 17369160 -11635496 - DMLTR5 LTR Gypsy 0 266 125 9 717 1451 0 25 15 chrUextra 17369260 17369457 -11635199 + NTS_DM Other Other 42 240 0 9 717 1861 0 17 13 chrUextra 17369457 17369696 -11634960 + NTS_DM Other Other 1 240 0 9 717 1839 4 17 13 chrUextra 17369696 17369935 -11634721 + NTS_DM Other Other 1 240 0 9 717 2772 197 15 11 chrUextra 17370059 17370757 -11633899 + SAR_DM Satellite Satellite 1 701 -397 9 717 5879 0 0 1 chrUextra 17370859 17371557 -11633099 - ROO_I LTR Pao -4560 3696 3000 9 717 2506 94 10 16 chrUextra 17371657 17372351 -11632305 + DMSAT6 Satellite Satellite 1 690 -85 9 717 436 0 0 0 chrUextra 17372465 17372515 -11632141 - CIRCE LINE Composite -1376 4980 4931 9 717 3422 30 42 0 chrUextra 17372515 17372948 -11631708 + R1_DM LINE R1 2277 2727 -2629 9 717 1777 10 0 0 chrUextra 17372946 17373155 -11631501 + R1_DM LINE R1 3520 3728 -1628 9 717 4319 0 0 6 chrUextra 17373255 17373769 -11630887 + DOC LINE Jockey 4211 4721 -4 9 717 411 202 0 0 chrUextra 17373769 17373893 -11630763 + (CTATT)n Simple_repeat Simple_repeat 4 127 0 9 717 5543 41 1 0 chrUextra 17374054 17374744 -11629912 - BATUMI_I LTR Pao -3681 4282 3592 9 717 3016 182 10 7 chrUextra 17374853 17375552 -11629104 - SAR_DM Satellite Satellite -519 953 253 9 717 5792 6 0 0 chrUextra 17375652 17376351 -11628305 - Invader2_I LTR Gypsy -1709 2883 2185 9 717 5665 7 3 0 chrUextra 17376451 17377150 -11627506 - Invader2_I LTR Gypsy -2416 2176 1476 9 717 2968 0 6 3 chrUextra 17377250 17377597 -11627059 + SSU-rRNA_Dme rRNA rRNA 1648 1995 0 9 717 21 89 0 0 chrUextra 17377616 17377672 -11626984 + AT_rich Low_complexity Low_complexity 1 56 0 9 717 2649 186 33 7 chrUextra 17378848 17379547 -11625109 + SAR_DM Satellite Satellite 1 716 -396 9 717 4265 46 20 36 chrUextra 17380446 17381145 -11623511 + BATUMI_I LTR Pao 194 881 -7082 9 717 982 51 7 0 chrUextra 17381245 17381383 -11623273 + ARS406_DM Unknown Unknown 51 189 -164 9 717 3056 168 12 13 chrUextra 17381261 17381944 -11622712 - SAR_DM Satellite Satellite -535 937 256 9 717 4610 13 0 4 chrUextra 17382044 17382743 -11621913 - Invader2_I LTR Gypsy -1041 3551 2769 9 717 2860 55 0 12 chrUextra 17382843 17383268 -11621388 + IDEFIX_I LTR Gypsy 5129 5548 -80 9 717 2088 37 0 4 chrUextra 17383270 17383542 -11621114 + IDEFIX_LTR LTR Gypsy 173 443 -151 9 717 1754 272 42 31 chrUextra 17383642 17384341 -11620315 - MAX_I LTR Pao -734 7180 6475 9 717 2898 63 5 17 chrUextra 17384700 17385106 -11619550 + Baggins1 LINE LOA 4791 5191 -262 9 717 3251 171 6 6 chrUextra 17385240 17385939 -11618717 + SAR_DM Satellite Satellite 376 1074 -398 9 717 1794 213 12 48 chrUextra 17386039 17386523 -11618133 + Gypsy12_LTR LTR Gypsy 93 559 -1777 9 717 286 282 8 61 chrUextra 17386583 17386715 -11617941 + Gypsy12_LTR LTR Gypsy 679 803 -1533 9 717 2879 183 11 9 chrUextra 17386844 17387537 -11617119 + SAR_DM Satellite Satellite 332 1026 -446 9 717 1710 46 5 0 chrUextra 17387637 17387855 -11616801 + PROTOP DNA P 4262 4480 0 9 717 26 30 0 0 chrUextra 17388214 17388247 -11616409 + AT_rich Low_complexity Low_complexity 1 33 0 9 717 22 70 0 0 chrUextra 17388293 17388336 -11616320 + AT_rich Low_complexity Low_complexity 1 43 0 9 717 5938 0 3 6 chrUextra 17389235 17389934 -11614722 - SSU-rRNA_Dme rRNA rRNA -183 1812 1116 9 717 1258 6 64 55 chrUextra 17390034 17390362 -11614294 + (TCTTG)n Simple_repeat Simple_repeat 1 331 0 9 717 205 0 171 0 chrUextra 17390362 17390397 -11614259 + (CATGT)n Simple_repeat Simple_repeat 4 44 0 9 717 759 40 71 0 chrUextra 17390397 17390523 -11614133 + (TCTTG)n Simple_repeat Simple_repeat 3 137 0 9 717 1164 56 0 17 chrUextra 17390523 17390704 -11613952 + (CATGT)n Simple_repeat Simple_repeat 3 180 0 9 717 243 0 0 0 chrUextra 17390704 17390730 -11613926 + (TCTTG)n Simple_repeat Simple_repeat 4 30 0 9 717 1294 22 16 27 chrUextra 17390833 17391021 -11613635 - NTS_DM Other Other -17 223 38 9 717 817 0 0 0 chrUextra 17391021 17391117 -11613539 - NTS_DM Other Other -107 133 38 9 717 832 9 9 27 chrUextra 17391117 17391228 -11613428 - NTS_DM Other Other -107 133 25 9 717 21 57 0 0 chrUextra 17391254 17391289 -11613367 + AT_rich Low_complexity Low_complexity 1 35 0 9 717 1252 18 0 6 chrUextra 17391289 17391454 -11613202 - NTS_DM Other Other -39 201 38 9 717 585 26 0 0 chrUextra 17391454 17391532 -11613124 - NTS_DM Other Other -107 133 56 9 717 260 264 87 16 chrUextra 17391632 17391759 -11612897 - QUASIMODO_I LTR Gypsy -2987 3073 2938 9 717 22 35 0 0 chrUextra 17391815 17391844 -11612812 + AT_rich Low_complexity Low_complexity 1 29 0 9 717 181 77 0 71 chrUextra 17391876 17391918 -11612738 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 9 717 2906 197 21 18 chrUextra 17392432 17393126 -11611530 - SAR_DM Satellite Satellite -563 696 1 9 717 2339 94 19 19 chrUextra 17393233 17393929 -11610727 + DMSAT6 Satellite Satellite 1 696 -152 9 717 1158 122 0 0 chrUextra 17394029 17394252 -11610404 + (TA)n Simple_repeat Simple_repeat 1 223 0 9 717 2990 14 0 5 chrUextra 17394253 17394622 -11610034 - ROVER-LTR_DM LTR Gypsy 0 367 1 9 717 871 19 0 0 chrUextra 17394622 17394728 -11609928 - ROVER-I_DM LTR Gypsy 0 6584 6479 9 717 2543 190 12 26 chrUextra 17394828 17395527 -11609129 + SAR_DM Satellite Satellite 1 689 -354 9 717 5684 17 1 1 chrUextra 17395627 17396326 -11608330 + FW_DM LINE Jockey 2749 3447 -1245 9 717 223 124 229 0 chrUextra 17397018 17397123 -11607533 + (TTTAG)n Simple_repeat Simple_repeat 5 133 0 9 717 3235 3 0 0 chrUextra 17397225 17397596 -11607060 + LSU-rRNA_Dme rRNA rRNA 3530 3900 0 9 717 22 56 0 0 chrUextra 17397668 17397704 -11606952 + AT_rich Low_complexity Low_complexity 1 36 0 9 717 246 150 0 0 chrUextra 17397709 17397749 -11606907 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 717 246 150 0 0 chrUextra 17397801 17397841 -11606815 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 717 2759 176 43 10 chrUextra 17398045 17398721 -11605935 - SAR_DM Satellite Satellite -396 1076 379 9 717 2833 176 33 8 chrUextra 17398829 17399497 -11605159 - SAR_DM Satellite Satellite -593 879 195 9 717 578 109 73 0 chrUextra 17399412 17399522 -11605134 + ARS406_DM Unknown Unknown 1 118 -235 9 717 5930 0 1 4 chrUextra 17399622 17400314 -11604342 - SSU-rRNA_Dme rRNA rRNA -602 1393 704 9 717 1620 0 0 0 chrUextra 17400421 17400702 -11603954 + (AATAG)n Simple_repeat Simple_repeat 1 281 0 9 717 2946 176 12 10 chrUextra 17401232 17401919 -11602737 - SAR_DM Satellite Satellite -396 1076 389 9 717 5865 0 3 3 chrUextra 17402021 17402718 -11601938 - R1_DM LINE R1 -3637 1719 1023 9 717 2788 191 30 11 chrUextra 17402818 17403510 -11601146 - SAR_DM Satellite Satellite -1088 705 1 9 717 262 106 0 21 chrUextra 17403832 17403880 -11600776 - HMSBEAGLE_I LTR Gypsy -6308 221 175 9 717 351 49 65 16 chrUextra 17403902 17403964 -11600692 - HMSBEAGLE_I LTR Gypsy -6464 65 1 9 717 897 173 102 15 chrUextra 17403963 17404168 -11600488 - DMLTR5 LTR Gypsy 0 266 44 9 717 5540 9 0 0 chrUextra 17404416 17405115 -11599541 + DM297_I LTR Gypsy 5277 5975 -192 9 717 5799 13 1 1 chrUextra 17405215 17405913 -11598743 + R1_DM LINE R1 3539 4236 -1120 9 717 3076 0 0 0 chrUextra 17406014 17406374 -11598282 + HETA LINE telomeric 5717 6076 -5 9 717 1082 213 235 14 chrUextra 17406360 17406713 -11597943 + TART LINE telomeric 3590 4020 -10457 9 717 3042 86 128 13 chrUextra 17406813 17407350 -11597306 - DMCR1A LINE CR1 -1526 2944 2346 9 717 2294 103 22 33 chrUextra 17407617 17408311 -11596345 + DMSAT6 Satellite Satellite 1 685 -233 9 717 4659 56 49 4 chrUextra 17408411 17409110 -11595546 - IDEFIX_I LTR Gypsy -1629 3999 3270 9 717 5216 11 0 1 chrUextra 17409210 17409876 -11594780 + DM176_I LTR Gypsy 5756 6420 0 9 717 247 30 0 0 chrUextra 17409876 17409909 -11594747 + DM176_LTR LTR Gypsy 1 33 -474 9 717 2019 8 0 0 chrUextra 17410011 17410248 -11594408 - QUASIMODO_I LTR Gypsy -5823 237 1 9 717 3921 9 0 2 chrUextra 17410248 17410708 -11593948 - QUASIMODO_LTR LTR Gypsy 0 658 200 9 717 22 56 0 0 chrUextra 17410960 17410996 -11593660 + AT_rich Low_complexity Low_complexity 1 36 0 9 717 310 324 27 27 chrUextra 17411348 17411497 -11593159 + Gypsy2_I LTR Gypsy 1344 1492 -4643 9 717 1037 298 75 9 chrUextra 17411609 17412300 -11592356 - Gypsy4_I LTR Gypsy -2489 3688 2860 9 717 408 212 0 17 chrUextra 17413205 17413320 -11591336 + XDMR_DM Unknown Unknown 248 360 0 9 717 2750 183 9 21 chrUextra 17413234 17413904 -11590752 - SAR_DM Satellite Satellite -354 1118 457 9 717 2821 186 8 8 chrUextra 17414004 17414671 -11589985 - SAR_DM Satellite Satellite -611 861 195 9 717 810 80 0 8 chrUextra 17414577 17414703 -11589953 + ARS406_DM Unknown Unknown 1 125 -228 9 717 3529 16 0 0 chrUextra 17414803 17415227 -11589429 - R1_DM LINE R1 -907 4449 4026 9 717 2127 23 0 4 chrUextra 17415237 17415502 -11589154 - R1_DM LINE R1 -1690 3666 3403 9 717 5815 7 1 0 chrUextra 17415602 17416301 -11588355 + QUASIMODO_I LTR Gypsy 2763 3462 -2598 9 717 5915 1 0 0 chrUextra 17416401 17417100 -11587556 + TABOR_I LTR Gypsy 1037 1735 -4601 9 717 5768 17 0 3 chrUextra 17417200 17417899 -11586757 - G_DM LINE Jockey -1167 3179 2483 9 717 6089 4 0 0 chrUextra 17417999 17418698 -11585958 + Gypsy6_I LTR Gypsy 2438 3136 -3876 9 717 5949 13 3 0 chrUextra 17418798 17419497 -11585159 - Copia2_I LTR Copia -1665 2497 1797 9 717 5705 11 0 0 chrUextra 17419597 17420296 -11584360 - Invader2_I LTR Gypsy -1115 3477 2779 9 717 5875 6 0 1 chrUextra 17420396 17421095 -11583561 + DMRT1B LINE R1 961 1658 -3525 9 717 2911 180 6 19 chrUextra 17421209 17421894 -11582762 - SAR_DM Satellite Satellite -353 1119 444 9 717 1861 0 17 13 chrUextra 17422022 17422261 -11582395 + NTS_DM Other Other 1 240 0 9 717 1861 0 17 13 chrUextra 17422261 17422500 -11582156 + NTS_DM Other Other 1 240 0 9 717 1301 6 0 18 chrUextra 17422500 17422665 -11581991 + NTS_DM Other Other 1 162 -78 9 717 5953 11 0 1 chrUextra 17422793 17423492 -11581164 + Gypsy6_I LTR Gypsy 5861 6558 -454 9 717 375 40 20 0 chrUextra 17424391 17424441 -11580215 + ARS406_DM Unknown Unknown 139 189 -164 9 717 2868 174 11 11 chrUextra 17424398 17425061 -11579595 - SAR_DM Satellite Satellite -615 857 195 9 717 754 107 0 0 chrUextra 17424968 17425090 -11579566 + ARS406_DM Unknown Unknown 1 122 -231 9 717 5383 6 0 0 chrUextra 17425193 17425822 -11578834 + QUASIMODO_LTR LTR Gypsy 30 658 0 9 717 586 0 0 0 chrUextra 17425822 17425889 -11578767 + QUASIMODO_I LTR Gypsy 1 67 -5993 9 717 5718 27 0 0 chrUextra 17426788 17427487 -11577169 - BATUMI_I LTR Pao -2684 5279 4581 9 717 4486 34 5 4 chrUextra 17427723 17428286 -11576370 - Baggins1 LINE LOA 0 5453 4890 9 717 5850 4 1 1 chrUextra 17428386 17429085 -11575571 - R1_DM LINE R1 -3862 1494 796 9 717 2738 181 19 26 chrUextra 17429186 17429884 -11574772 - SAR_DM Satellite Satellite -359 1113 421 9 717 1264 6 6 18 chrUextra 17429989 17430153 -11574503 - NTS_DM Other Other -78 162 1 9 717 1861 0 17 13 chrUextra 17430153 17430392 -11574264 - NTS_DM Other Other 0 240 1 9 717 1817 4 17 17 chrUextra 17430392 17430632 -11574024 - NTS_DM Other Other 0 240 1 9 717 273 0 78 59 chrUextra 17430632 17430683 -11573973 - NTS_DM Other Other 0 240 189 9 717 2885 6 0 3 chrUextra 17430783 17431127 -11573529 - DM176_LTR LTR Gypsy -164 343 1 9 717 1158 122 0 0 chrUextra 17431128 17431478 -11573178 + (TA)n Simple_repeat Simple_repeat 1 350 0 9 717 302 0 0 122 chrUextra 17431582 17431631 -11573025 - NINJA_LTR LTR Pao -274 43 1 9 717 5249 21 3 1 chrUextra 17431631 17432281 -11572375 - NINJA_I LTR Pao 0 6011 5361 9 718 58 15 0 0 chrUextra 17432816 17432881 -11571775 + AT_rich Low_complexity Low_complexity 1 65 0 9 718 5892 0 1 4 chrUextra 17433180 17433879 -11570777 - R1_DM LINE R1 -3562 1794 1098 9 718 2263 58 6 22 chrUextra 17434360 17434678 -11569978 - Baggins1 LINE LOA -262 5191 4879 9 718 58 15 0 0 chrUextra 17435018 17435083 -11569573 + AT_rich Low_complexity Low_complexity 1 65 0 9 718 22 35 0 0 chrUextra 17435258 17435287 -11569369 + AT_rich Low_complexity Low_complexity 1 29 0 9 718 1315 6 6 0 chrUextra 17435321 17435477 -11569179 + Copia2_I LTR Copia 3117 3273 -889 9 718 5845 16 6 0 chrUextra 17436376 17437075 -11567581 - Copia2_I LTR Copia -995 3167 2465 9 718 2196 96 170 0 chrUextra 17437175 17437551 -11567105 + TAHRE LINE telomeric 10012 10451 -12 9 718 1088 173 105 68 chrUextra 17437550 17437873 -11566783 + TAHRE LINE telomeric 7044 7378 -3085 9 718 5748 16 29 0 chrUextra 17437974 17438673 -11565983 - FW_DM LINE Jockey -626 4066 3348 9 718 4633 63 39 3 chrUextra 17438773 17439472 -11565184 - TART LINE telomeric -11478 2999 2276 9 718 541 137 11 0 chrUextra 17439615 17439710 -11564946 + DMCR1A LINE CR1 365 460 -4010 9 718 3558 27 9 50 chrUextra 17439729 17440270 -11564386 + DOC5_DM LINE Jockey 3979 4497 -185 9 718 6105 0 0 1 chrUextra 17440371 17441070 -11563586 - LSU-rRNA_Dme rRNA rRNA -498 3402 2705 9 718 1533 25 0 0 chrUextra 17441170 17441453 -11563203 + (CTTAT)n Simple_repeat Simple_repeat 1 283 0 9 718 1059 91 0 0 chrUextra 17441468 17441643 -11563013 + (CTTAT)n Simple_repeat Simple_repeat 3 177 0 9 718 812 129 0 6 chrUextra 17441698 17441869 -11562787 + (CTTAT)n Simple_repeat Simple_repeat 2 171 0 9 718 3709 0 0 0 chrUextra 17441969 17442395 -11562261 - NOMAD_I LTR Gypsy -6146 426 1 9 718 2352 4 0 0 chrUextra 17442395 17442668 -11561988 - NOMAD_LTR LTR Gypsy 0 518 246 9 718 335 296 19 19 chrUextra 17443040 17443202 -11561454 - MDG3_I LTR Gypsy -1562 3424 3263 9 718 5755 9 1 0 chrUextra 17443567 17444266 -11560390 + Invader2_I LTR Gypsy 3530 4229 -363 9 718 5960 10 0 0 chrUextra 17444366 17445065 -11559591 - FW_DM LINE Jockey -235 4457 3759 9 718 3084 175 6 17 chrUextra 17445964 17446662 -11557994 + SAR_DM Satellite Satellite 418 1107 -365 9 718 488 119 36 0 chrUextra 17446847 17446931 -11557725 + NTS_DM Other Other 4 90 -150 9 718 28 48 0 0 chrUextra 17447204 17447246 -11557410 + AT_rich Low_complexity Low_complexity 1 42 0 9 718 5506 12 0 0 chrUextra 17447562 17448212 -11556444 + DMRT1A LINE R1 2361 3010 -2173 9 718 263 78 20 0 chrUextra 17448210 17448261 -11556395 - TRANSIB4 DNA Transib -52 2558 2507 9 718 1930 96 16 13 chrUextra 17448753 17449060 -11555596 + Invader1_I LTR Gypsy 2718 3025 -161 9 718 3058 176 9 10 chrUextra 17449166 17449859 -11554797 - SAR_DM Satellite Satellite -514 958 267 9 718 5883 13 0 0 chrUextra 17449959 17450658 -11553998 + ROO_I LTR Pao 5220 5918 -2338 9 718 1908 257 20 17 chrUextra 17451557 17452214 -11552442 + FROGGER_I LTR Copia 1333 1991 -86 9 718 6121 1 0 0 chrUextra 17452356 17453055 -11551601 - SSU-rRNA_Dme rRNA rRNA -888 1107 409 9 718 5513 24 49 1 chrUextra 17453155 17453854 -11550802 - R1_DM LINE R1 -1990 3366 2635 9 718 6072 1 0 0 chrUextra 17453954 17454653 -11550003 - FW_DM LINE Jockey -2155 2537 1839 9 718 1332 0 0 0 chrUextra 17454753 17454901 -11549755 + (GAGAA)n Simple_repeat Simple_repeat 2 149 0 9 718 5872 4 1 1 chrUextra 17455552 17456251 -11548405 + R1_DM LINE R1 772 1470 -3886 9 718 502 0 0 0 chrUextra 17456351 17456409 -11548247 - NTS_DM Other Other -145 95 38 9 718 802 9 9 36 chrUextra 17456409 17456521 -11548135 - NTS_DM Other Other -107 133 25 9 718 21 57 0 0 chrUextra 17456547 17456582 -11548074 + AT_rich Low_complexity Low_complexity 1 35 0 9 718 1252 18 0 6 chrUextra 17456582 17456747 -11547909 - NTS_DM Other Other -39 201 38 9 718 870 9 0 27 chrUextra 17456747 17456859 -11547797 - NTS_DM Other Other -107 133 25 9 718 943 22 0 14 chrUextra 17456911 17457050 -11547606 - NTS_DM Other Other -39 201 65 9 718 6081 0 4 0 chrUextra 17457150 17457849 -11546807 + LSU-rRNA_Dme rRNA rRNA 2970 3671 -229 9 718 5961 0 0 0 chrUextra 17458756 17459447 -11545209 - BARI_DM DNA Tc1 -1 1727 1037 9 718 1955 0 0 0 chrUextra 17459547 17459772 -11544884 + BEL_LTR LTR Pao 137 361 0 9 718 866 62 0 0 chrUextra 17459784 17459897 -11544759 - CIRCE LINE Composite -5271 1085 973 9 718 1708 20 0 0 chrUextra 17460039 17460243 -11544413 - CIRCE LINE Composite -5386 970 767 9 718 5477 3 5 5 chrUextra 17460389 17461045 -11543611 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1133 9 718 1623 14 5 0 chrUextra 17461145 17461356 -11543300 + QUASIMODO_I LTR Gypsy 5849 6060 0 9 718 4083 8 0 0 chrUextra 17461356 17461844 -11542812 + QUASIMODO_LTR LTR Gypsy 1 488 -170 9 718 5861 1 0 4 chrUextra 17461945 17462643 -11542013 + ROO_I LTR Pao 1814 2508 -5748 9 718 5734 30 0 0 chrUextra 17462743 17463442 -11541214 + DMRT1B LINE R1 3099 3797 -1386 9 718 2993 173 10 9 chrUextra 17463547 17464229 -11540427 - SAR_DM Satellite Satellite -610 862 180 9 718 697 102 0 8 chrUextra 17464122 17464241 -11540415 + ARS406_DM Unknown Unknown 1 118 -235 9 718 5915 1 1 6 chrUextra 17464341 17465040 -11539616 - LSU-rRNA_Dme rRNA rRNA -2422 1478 783 9 718 3482 64 4 4 chrUextra 17465140 17465613 -11539043 - R1_DM LINE R1 -4883 473 1 9 718 1669 10 0 0 chrUextra 17465646 17465839 -11538817 - R1_DM LINE R1 0 5356 5164 9 718 5540 1 1 36 chrUextra 17465939 17466638 -11538018 - LSU-rRNA_Dme rRNA rRNA -3109 791 117 9 718 2850 177 9 11 chrUextra 17466740 17467404 -11537252 - SAR_DM Satellite Satellite -615 857 195 9 718 772 103 0 0 chrUextra 17467311 17467437 -11537219 + ARS406_DM Unknown Unknown 1 126 -227 9 718 4372 25 60 1 chrUextra 17467537 17468236 -11536420 + R1_DM LINE R1 2065 2804 -2552 9 718 1488 31 1 1 chrUextra 17468336 17469035 -11535621 + (CTTAT)n Simple_repeat Simple_repeat 1 699 0 9 718 3060 181 7 9 chrUextra 17469137 17469830 -11534826 + SAR_DM Satellite Satellite 346 1037 -435 9 718 2932 176 10 10 chrUextra 17469941 17470629 -11534027 + SAR_DM Satellite Satellite 192 879 -593 9 718 2893 181 15 18 chrUextra 17470733 17471432 -11533224 + SAR_DM Satellite Satellite 1 697 -411 9 718 3372 7 5 0 chrUextra 17471532 17471935 -11532721 + IDEFIX_I LTR Gypsy 2283 2687 -2941 9 718 2292 33 0 10 chrUextra 17471929 17472231 -11532425 + IDEFIX_I LTR Gypsy 2814 3112 -2516 9 718 357 243 18 0 chrUextra 17472331 17472442 -11532214 + SAR_DM Satellite Satellite 964 1076 -396 9 718 1746 177 25 9 chrUextra 17472457 17473026 -11531630 + SAR_DM Satellite Satellite 1 578 -749 9 718 8925 76 44 31 chrUextra 17473929 17475195 -11529461 + R1_DM LINE R1 4074 5356 0 9 718 1364 75 10 0 chrUextra 17475228 17475427 -11529229 + R1_DM LINE R1 1 201 -5155 9 718 5966 1 3 4 chrUextra 17475527 17476226 -11528430 + SSU-rRNA_Dme rRNA rRNA 1075 1772 -223 9 718 3162 172 7 7 chrUextra 17476336 17477021 -11527635 + SAR_DM Satellite Satellite 195 879 -593 9 718 5271 22 0 44 chrUextra 17477125 17477824 -11526832 + CIRCE LINE Composite 3904 4571 -1785 9 718 2934 179 9 20 chrUextra 17477931 17478623 -11526033 - SAR_DM Satellite Satellite -353 1119 436 9 718 5791 20 1 0 chrUextra 17478723 17479422 -11525234 + R1_DM LINE R1 1783 2482 -2874 9 718 1145 109 15 5 chrUextra 17480019 17480221 -11524435 + DNAREP1_DM LINE Penelope 1 204 -390 9 718 6070 3 1 0 chrUextra 17480321 17481020 -11523636 + Gypsy6_I LTR Gypsy 1082 1781 -5231 9 718 1229 0 19 6 chrUextra 17481120 17481278 -11523378 + LSU-rRNA_Dme rRNA rRNA 1629 1788 -2112 9 718 4296 2 0 2 chrUextra 17481322 17481819 -11522837 + LSU-rRNA_Dme rRNA rRNA 1788 2283 -1617 9 718 5976 0 3 4 chrUextra 17481919 17482618 -11522038 - SSU-rRNA_Dme rRNA rRNA -185 1810 1113 9 718 5885 0 1 3 chrUextra 17482718 17483417 -11521239 + ROO_I LTR Pao 1699 2396 -5860 9 718 22 0 0 0 chrUextra 17484100 17484122 -11520534 + AT_rich Low_complexity Low_complexity 1 22 0 9 718 5567 42 0 0 chrUextra 17485115 17485814 -11518842 + DIVER_I LTR Pao 3090 3788 -1855 9 718 3231 169 6 10 chrUextra 17485926 17486608 -11518048 + SAR_DM Satellite Satellite 369 1047 -425 9 718 3186 165 11 15 chrUextra 17486717 17487411 -11517245 - SAR_DM Satellite Satellite -1109 690 1 9 718 771 121 0 85 chrUextra 17487514 17487667 -11516989 + DM176_I LTR Gypsy 6281 6420 0 9 718 235 190 17 17 chrUextra 17487901 17487960 -11516696 + DM176_LTR LTR Gypsy 308 366 -141 9 718 552 148 40 16 chrUextra 17487977 17488101 -11516555 + DMTOM1_LTR LTR Gypsy 284 410 0 9 718 388 100 14 28 chrUextra 17488101 17488164 -11516492 + DMTOM1_LTR LTR Gypsy 349 410 0 9 718 248 172 17 17 chrUextra 17488454 17488513 -11516143 + DM176_LTR LTR Gypsy 308 366 -141 9 718 552 148 40 16 chrUextra 17488530 17488654 -11516002 + DMTOM1_LTR LTR Gypsy 284 410 0 9 718 388 100 14 28 chrUextra 17488654 17488717 -11515939 + DMTOM1_LTR LTR Gypsy 349 410 0 9 718 301 223 23 76 chrUextra 17488717 17488848 -11515808 + ROVER-I_DM LTR Gypsy 1 124 -6460 9 718 23 0 0 0 chrUextra 17488966 17488989 -11515667 + AT_rich Low_complexity Low_complexity 1 23 0 9 718 5578 19 1 0 chrUextra 17489107 17489805 -11514851 + TART LINE telomeric 8857 9555 -4922 9 718 6157 0 0 0 chrUextra 17489905 17490603 -11514053 - R2_DM LINE R2 -1432 2175 1478 9 718 2579 32 6 6 chrUextra 17491058 17491401 -11513255 + CIRCE LINE Composite 4981 5323 -1033 9 718 5006 39 0 0 chrUextra 17491560 17492199 -11512457 - G2_DM LINE Jockey 0 3102 2464 9 718 1683 166 11 3 chrUextra 17492303 17492660 -11511996 - SAR_DM Satellite Satellite -577 895 536 9 718 1644 77 35 24 chrUextra 17492663 17492997 -11511659 + Gypsy6A_LTR LTR Gypsy 1 337 -83 9 718 34 24 0 0 chrUextra 17493643 17493684 -11510972 + AT_rich Low_complexity Low_complexity 1 41 0 9 718 722 0 12 0 chrUextra 17493895 17493981 -11510675 + LSU-rRNA_Dme rRNA rRNA 3814 3900 0 9 718 29 28 0 0 chrUextra 17494053 17494089 -11510567 + AT_rich Low_complexity Low_complexity 1 36 0 9 718 246 150 0 0 chrUextra 17494094 17494134 -11510522 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 718 246 150 0 0 chrUextra 17494186 17494226 -11510430 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 718 246 150 0 0 chrUextra 17494278 17494318 -11510338 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 718 255 125 0 0 chrUextra 17494361 17494401 -11510255 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 9 718 22 56 0 0 chrUextra 17494414 17494450 -11510206 + AT_rich Low_complexity Low_complexity 1 36 0 9 718 870 9 0 27 chrUextra 17494476 17494588 -11510068 + NTS_DM Other Other 25 133 -107 9 718 2874 179 9 8 chrUextra 17494693 17495352 -11509304 - SAR_DM Satellite Satellite -621 851 192 9 718 809 112 0 0 chrUextra 17495257 17495391 -11509265 + ARS406_DM Unknown Unknown 2 135 -218 9 718 2873 191 12 20 chrUextra 17495493 17496185 -11508471 - SAR_DM Satellite Satellite -633 686 1 9 718 385 0 63 48 chrUextra 17496289 17496352 -11508304 + NTS_DM Other Other 177 240 0 9 718 1734 21 17 17 chrUextra 17496352 17496592 -11508064 + NTS_DM Other Other 1 240 0 9 718 1731 21 17 17 chrUextra 17496592 17496832 -11507824 + NTS_DM Other Other 1 240 0 9 718 1183 19 7 7 chrUextra 17496832 17496987 -11507669 + NTS_DM Other Other 1 155 -85 9 718 5311 48 0 0 chrUextra 17497116 17497785 -11506871 - BATUMI_I LTR Pao -3642 4321 3653 9 718 4350 43 73 6 chrUextra 17497885 17498583 -11506073 - BATUMI_I LTR Pao -2590 5373 4629 9 718 5826 17 1 0 chrUextra 17498683 17499381 -11505275 - BATUMI_I LTR Pao -2496 5467 4769 9 718 4461 4 0 0 chrUextra 17499481 17500000 -11504656 + FW_DM LINE Jockey 4155 4673 -19 9 718 21 0 0 0 chrUextra 17500007 17500028 -11504628 + AT_rich Low_complexity Low_complexity 1 21 0 9 718 857 146 0 0 chrUextra 17500028 17500179 -11504477 + S_DM DNA Tc1 1380 1530 -206 9 718 3518 160 16 14 chrUextra 17500279 17500977 -11503679 - SAR_DM Satellite Satellite -472 1000 302 9 718 572 58 151 0 chrUextra 17501169 17501255 -11503401 + MAX_I LTR Pao 1256 1354 -6560 9 718 3640 65 41 28 chrUextra 17501239 17501775 -11502881 + MAX_I LTR Pao 1217 1759 -6155 9 718 1043 7 14 0 chrUextra 17501880 17502020 -11502636 + DOC LINE Jockey 4584 4725 0 9 718 285 106 0 21 chrUextra 17502209 17502257 -11502399 - HMSBEAGLE_I LTR Gypsy -6308 221 175 9 718 376 49 65 16 chrUextra 17502279 17502341 -11502315 - HMSBEAGLE_I LTR Gypsy -6464 65 1 9 718 964 178 102 15 chrUextra 17502340 17502545 -11502111 - DMLTR5 LTR Gypsy 0 266 44 9 718 4631 4 0 0 chrUextra 17502673 17503177 -11501479 + NOMAD_LTR LTR Gypsy 15 518 0 9 718 1775 0 0 0 chrUextra 17503177 17503371 -11501285 + NOMAD_I LTR Gypsy 1 194 -6378 9 718 189 0 0 0 chrUextra 17503478 17503499 -11501157 + (A)n Simple_repeat Simple_repeat 1 21 0 9 718 895 140 66 32 chrUextra 17503519 17503831 -11500825 + HETA LINE telomeric 5965 6076 -5 9 718 1162 182 11 42 chrUextra 17503844 17504169 -11500487 + TAHRE LINE telomeric 18 607 -5474 9 718 3478 12 0 71 chrUextra 17504269 17504707 -11499949 + MICROPIA_LTR LTR Gypsy 70 476 0 9 718 2319 16 0 4 chrUextra 17504707 17504967 -11499689 + MICROPIA_I LTR Gypsy 1 259 -4217 9 718 6060 23 0 1 chrUextra 17505067 17505765 -11498891 - R1_DM LINE R1 -2525 2831 2135 9 718 1028 9 0 0 chrUextra 17505865 17505976 -11498680 + R1_DM LINE R1 5246 5356 0 9 718 5452 3 0 2 chrUextra 17505974 17506563 -11498093 + LSU-rRNA_Dme rRNA rRNA 2640 3227 -673 9 718 6454 0 1 1 chrUextra 17506666 17507361 -11497295 - LSU-rRNA_Dme rRNA rRNA -485 3415 2721 9 718 459 188 0 0 chrUextra 17507461 17507578 -11497078 + (AATAG)n Simple_repeat Simple_repeat 2 118 0 9 718 6045 19 9 0 chrUextra 17508259 17508957 -11495699 + NINJA_I LTR Pao 2521 3224 -2787 9 718 1246 0 0 0 chrUextra 17509127 17509262 -11495394 + 5S_DM RNA RNA 1 135 0 9 718 1236 7 0 0 chrUextra 17509496 17509631 -11495025 + 5S_DM RNA RNA 1 135 0 9 718 6290 14 0 3 chrUextra 17509855 17510553 -11494103 + Invader1_I LTR Gypsy 267 962 -2224 9 718 5157 100 0 0 chrUextra 17510653 17511351 -11493305 + HETA LINE telomeric 2147 2844 -3237 9 718 2192 189 81 28 chrUextra 17511451 17512145 -11492511 - SAR_DM Satellite Satellite -425 730 1 9 718 247 65 0 0 chrUextra 17512118 17512149 -11492507 + ARS406_DM Unknown Unknown 1 31 -322 9 718 235 0 0 158 chrUextra 17512742 17512926 -11491730 + (ACTAG)n Simple_repeat Simple_repeat 4 158 0 9 718 622 45 0 136 chrUextra 17513047 17513150 -11491506 + Baggins1 LINE LOA 5365 5453 0 9 718 1258 50 6 0 chrUextra 17513586 17513745 -11490911 + Baggins1 LINE LOA 4791 4950 -503 9 718 2726 50 6 0 chrUextra 17514204 17514543 -11490113 + Baggins1 LINE LOA 4791 5131 -322 9 718 582 28 0 0 chrUextra 17515269 17515341 -11489315 + (GAGAA)n Simple_repeat Simple_repeat 4 75 0 9 718 3538 164 10 9 chrUextra 17516244 17516937 -11487719 + SAR_DM Satellite Satellite 326 1019 -453 9 718 3340 163 32 13 chrUextra 17517037 17517728 -11486928 + SAR_DM Satellite Satellite 353 1056 -416 9 718 255 93 0 0 chrUextra 17518225 17518268 -11486388 + (CATCT)n Simple_repeat Simple_repeat 3 45 0 9 718 1554 23 0 0 chrUextra 17518274 17518533 -11486123 + (TTCTC)n Simple_repeat Simple_repeat 1 259 0 9 718 6516 3 0 0 chrUextra 17518633 17519331 -11485325 - LSU-rRNA_Dme rRNA rRNA -498 3402 2705 9 718 3205 179 12 8 chrUextra 17520229 17520897 -11483759 - SAR_DM Satellite Satellite -622 850 180 9 718 903 103 0 0 chrUextra 17520791 17520927 -11483729 + ARS406_DM Unknown Unknown 1 136 -217 9 718 2778 43 8 17 chrUextra 17521825 17522183 -11482473 - BATUMI_I LTR Pao -5695 2268 1914 9 718 2668 48 3 15 chrUextra 17522181 17522523 -11482133 - BATUMI_I LTR Pao -5891 2072 1735 9 718 32 0 0 0 chrUextra 17522815 17522847 -11481809 + AT_rich Low_complexity Low_complexity 1 32 0 9 718 3187 3 0 0 chrUextra 17522979 17523321 -11481335 + SSU-rRNA_Dme rRNA rRNA 1 342 -1653 9 718 492 95 0 0 chrUextra 17524035 17524119 -11480537 + (CAAGA)n Simple_repeat Simple_repeat 2 85 0 9 718 264 241 24 24 chrUextra 17524225 17524310 -11480346 + Copia_I LTR Copia 4428 4512 -81 9 718 3196 39 44 0 chrUextra 17525017 17525406 -11479250 - PROTOP DNA P -4074 406 1 9 718 1056 8 0 0 chrUextra 17525815 17525936 -11478720 + (TATTG)n Simple_repeat Simple_repeat 4 124 0 9 718 6357 11 0 0 chrUextra 17526613 17527311 -11477345 - BLOOD_I LTR Gypsy -2077 4536 3839 9 718 1599 6 0 0 chrUextra 17527430 17527610 -11477046 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 9 718 3133 194 6 14 chrUextra 17528216 17528907 -11475749 - SAR_DM Satellite Satellite -532 940 256 9 718 921 124 92 10 chrUextra 17529007 17529202 -11475454 + DNAREP1_DM LINE Penelope 87 297 -297 9 718 2345 38 24 0 chrUextra 17530603 17530896 -11473760 + IDEFIX_LTR LTR Gypsy 17 316 -278 9 718 21 0 0 0 chrUextra 17530896 17530917 -11473739 + AT_rich Low_complexity Low_complexity 1 21 0 9 718 2924 32 3 6 chrUextra 17530919 17531269 -11473387 - CIRCE LINE Composite -1027 5329 4981 9 718 2978 230 3 4 chrUextra 17531405 17532095 -11472561 + DM412 LTR Gypsy 5492 6180 -717 9 718 6432 0 0 0 chrUextra 17532199 17532897 -11471759 - R1_DM LINE R1 -2513 2843 2146 9 718 247 0 0 0 chrUextra 17532997 17533025 -11471631 + DM297_I LTR Gypsy 6140 6167 0 9 718 3614 5 7 7 chrUextra 17533025 17533439 -11471217 + DM297_LTR LTR Gypsy 1 414 0 9 718 1880 5 0 0 chrUextra 17533492 17533695 -11470961 + SSU-rRNA_Dme rRNA rRNA 1 203 -1792 9 718 6399 76 8 8 chrUextra 17533795 17534636 -11470020 - Gypsy4_I LTR Gypsy -3020 3268 2570 9 718 4315 2 0 0 chrUextra 17534593 17535056 -11469600 - LSU-rRNA_Dme rRNA rRNA -1650 2250 1788 9 718 1610 5 10 10 chrUextra 17535097 17535291 -11469365 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1598 9 718 2594 109 44 19 chrUextra 17535391 17535802 -11468854 + Invader1_LTR LTR Gypsy 3 423 0 9 718 281 203 108 0 chrUextra 17535874 17535948 -11468708 - HMSBEAGLE_I LTR Gypsy -5951 578 497 9 718 420 155 9 46 chrUextra 17535980 17536088 -11468568 - HMSBEAGLE_I LTR Gypsy -6030 499 396 9 718 3481 23 5 2 chrUextra 17536189 17536587 -11468069 - Gypsy_LTR LTR Gypsy -83 399 1 9 718 239 252 7 66 chrUextra 17536589 17536725 -11467931 - ROVER-I_DM LTR Gypsy -5607 977 850 9 718 1047 43 0 7 chrUextra 17536746 17536887 -11467769 - LOOPER1_DM DNA PiggyBac -1529 352 213 9 718 6472 1 1 1 chrUextra 17536987 17537685 -11466971 + LSU-rRNA_Dme rRNA rRNA 2958 3655 -245 9 718 5189 40 2 0 chrUextra 17537874 17538480 -11466176 + Baggins1 LINE LOA 4791 5397 -56 9 718 2540 267 1 3 chrUextra 17538583 17539279 -11465377 - ROVER-I_DM LTR Gypsy -2628 3956 3262 9 718 3138 6 0 3 chrUextra 17539381 17539732 -11464924 - R1_DM LINE R1 -207 5149 4800 9 718 585 0 0 0 chrUextra 17539739 17539802 -11464854 - R1_DM LINE R1 0 5356 5294 9 718 2601 4 0 0 chrUextra 17539800 17540079 -11464577 - LSU-rRNA_Dme rRNA rRNA -1244 2656 2378 9 718 3499 170 10 9 chrUextra 17540179 17540874 -11463782 + SAR_DM Satellite Satellite 352 1047 -425 9 718 6122 22 0 7 chrUextra 17540977 17541675 -11462981 + BATUMI_I LTR Pao 5425 6117 -1846 9 718 1880 5 0 0 chrUextra 17541775 17541978 -11462678 - SSU-rRNA_Dme rRNA rRNA -1792 203 1 9 718 32 0 0 0 chrUextra 17542110 17542142 -11462514 + AT_rich Low_complexity Low_complexity 1 32 0 9 718 2218 175 54 29 chrUextra 17542577 17543271 -11461385 - SAR_DM Satellite Satellite -479 711 1 9 718 3368 171 9 9 chrUextra 17543390 17544069 -11460587 + SAR_DM Satellite Satellite 326 1004 -468 9 718 1263 276 34 29 chrUextra 17544169 17544866 -11459790 - STALKER4_I LTR Gypsy -3070 3460 2760 9 718 6261 0 1 3 chrUextra 17544967 17545665 -11458991 + ROO_I LTR Pao 2717 3413 -4843 1 718 3278 177 13 8 chrUextra 17545765 17546436 -11458220 + SAR_DM Satellite Satellite 402 1076 -396 1 718 37 39 0 0 chrUextra 17546850 17546901 -11457755 + AT_rich Low_complexity Low_complexity 1 51 0 1 718 22 35 0 0 chrUextra 17547002 17547031 -11457625 + AT_rich Low_complexity Low_complexity 1 29 0 1 718 3266 183 10 9 chrUextra 17547361 17548051 -11456605 + SAR_DM Satellite Satellite 268 958 -514 1 718 2796 22 9 0 chrUextra 17548159 17548478 -11456178 - CIRCE LINE Composite -6034 322 1 1 718 3223 37 21 0 chrUextra 17548478 17548857 -11455799 - CIRCE LINE Composite 0 6356 5970 1 718 6146 0 0 0 chrUextra 17548981 17549655 -11455001 + LSU-rRNA_Dme rRNA rRNA 218 891 -3009 1 718 28 48 0 0 chrUextra 17550077 17550119 -11454537 + AT_rich Low_complexity Low_complexity 1 42 0 1 718 392 115 49 0 chrUextra 17550392 17550453 -11454203 - NTS_DM Other Other -150 90 27 1 718 3804 2 0 2 chrUextra 17550553 17550999 -11453657 + Invader2_I LTR Gypsy 4148 4592 0 1 718 2332 4 0 0 chrUextra 17550999 17551251 -11453405 + Invader2_LTR LTR Gypsy 1 252 -14 1 718 6244 6 7 7 chrUextra 17551351 17552049 -11452607 + CIRCE LINE Composite 1782 2479 -3877 1 718 606 22 43 43 chrUextra 17552149 17552243 -11452413 + NTS_DM Other Other 147 240 0 1 718 1845 30 17 17 chrUextra 17552243 17552483 -11452173 + NTS_DM Other Other 1 240 0 1 718 1210 8 0 0 chrUextra 17552483 17552616 -11452040 + NTS_DM Other Other 1 133 -107 1 718 1350 18 0 6 chrUextra 17552616 17552781 -11451875 + NTS_DM Other Other 38 201 -39 1 718 21 57 0 0 chrUextra 17552781 17552816 -11451840 + AT_rich Low_complexity Low_complexity 1 35 0 1 718 6122 23 14 1 chrUextra 17552947 17553645 -11451011 - MAX_I LTR Pao -1026 6888 6182 1 718 6391 11 0 0 chrUextra 17554543 17555241 -11449415 + Copia2_I LTR Copia 1568 2265 -1897 1 718 4824 22 4 2 chrUextra 17555348 17555902 -11448754 - PROTOP_A DNA P -550 555 1 1 718 1102 51 7 7 chrUextra 17555902 17556039 -11448617 - PROTOP_A DNA P -31 1074 938 1 718 6100 19 3 3 chrUextra 17556139 17556837 -11447819 - NINJA_I LTR Pao -2487 3524 2827 1 718 6420 0 0 0 chrUextra 17557735 17558433 -11446223 - MAX_I LTR Pao -1368 6546 5849 1 718 5755 37 0 0 chrUextra 17558534 17559231 -11445425 - IDEFIX_I LTR Gypsy -3866 1762 1066 1 718 5959 3 7 0 chrUextra 17559331 17560029 -11444627 + DM176_I LTR Gypsy 1290 1992 -4428 1 718 6144 3 0 0 chrUextra 17560129 17560827 -11443829 - Copia_I LTR Copia -2090 2503 1806 1 718 4422 67 10 2 chrUextra 17560927 17561536 -11443120 + IDEFIX_I LTR Gypsy 3574 4187 -1441 1 718 326 25 0 0 chrUextra 17561535 17561575 -11443081 - IDEFIX_I LTR Gypsy -1394 4234 4195 1 718 288 0 0 0 chrUextra 17561587 17561625 -11443031 - IDEFIX_I LTR Gypsy -1191 4437 4400 1 718 2470 87 14 42 chrUextra 17561725 17562423 -11442233 + DMSAT6 Satellite Satellite 1 678 -114 1 718 5984 9 39 0 chrUextra 17562523 17563221 -11441435 - Invader4_I LTR Gypsy -884 1529 805 1 89 3193 176 9 9 chrUextra 17563321 17563996 -11440660 - SAR_DM Satellite Satellite -472 1000 326 1 719 5663 16 63 1 chrUextra 17564119 17564817 -11439839 - Gypsy4_I LTR Gypsy -1269 5019 4279 1 719 3025 190 19 24 chrUextra 17564918 17565615 -11439041 - SAR_DM Satellite Satellite -634 693 1 1 719 2574 210 43 9 chrUextra 17565716 17566411 -11438245 - SAR_DM Satellite Satellite -563 909 191 1 719 6170 7 0 0 chrUextra 17566513 17567211 -11437445 + QUASIMODO_I LTR Gypsy 2458 3155 -2905 1 719 2961 0 3 0 chrUextra 17567311 17567635 -11437021 + SSU-rRNA_Dme rRNA rRNA 1671 1995 0 1 719 21 89 0 0 chrUextra 17567654 17567710 -11436946 + AT_rich Low_complexity Low_complexity 1 56 0 1 719 2666 3 13 0 chrUextra 17568109 17568408 -11436248 + SSU-rRNA_Dme rRNA rRNA 1693 1995 0 1 719 2435 107 26 65 chrUextra 17568909 17569369 -11435287 + TART LINE telomeric 2921 3362 -11115 1 719 1298 124 0 28 chrUextra 17569364 17569578 -11435078 + TART LINE telomeric 3683 3890 -10587 1 719 226 0 0 0 chrUextra 17569578 17569605 -11435051 - PROTOP_A DNA P -1 1104 1078 1 719 1424 96 6 7 chrUextra 17569708 17569930 -11434726 + MDG1_I LTR Gypsy 781 1138 -5458 1 719 2853 63 82 0 chrUextra 17569976 17570403 -11434253 + MDG1_I LTR Gypsy 1134 1595 -5001 1 719 2650 174 7 3 chrUextra 17570503 17571197 -11433459 - SAR_DM Satellite Satellite -685 696 1 1 719 2867 195 7 22 chrUextra 17571303 17571995 -11432661 - SAR_DM Satellite Satellite -359 1113 432 1 719 2043 178 7 9 chrUextra 17572099 17572797 -11431859 + SAR_DM Satellite Satellite 1 697 -396 1 719 3634 53 47 2 chrUextra 17573103 17573594 -11431062 - PROTOP_A DNA P 0 1105 593 1 719 267 0 0 0 chrUextra 17573695 17573725 -11430931 - SSU-rRNA_Dme rRNA rRNA -1965 30 1 1 719 32 0 0 0 chrUextra 17573857 17573889 -11430767 + AT_rich Low_complexity Low_complexity 1 32 0 1 719 28 48 0 0 chrUextra 17574218 17574260 -11430396 + AT_rich Low_complexity Low_complexity 1 42 0 1 719 631 155 160 15 chrUextra 17574493 17574624 -11430032 - DMLTR5 LTR Gypsy -73 193 44 1 719 377 261 114 96 chrUextra 17574832 17575112 -11429544 + Invader1_LTR LTR Gypsy 84 368 -55 1 719 6333 1 0 1 chrUextra 17575291 17575989 -11428667 - LSU-rRNA_Dme rRNA rRNA -1376 2524 1828 1 719 367 0 0 0 chrUextra 17576089 17576130 -11428526 - R1_DM LINE R1 -5315 41 1 1 719 5971 3 0 0 chrUextra 17576130 17576787 -11427869 - LSU-rRNA_Dme rRNA rRNA -1268 2632 1976 1 719 6222 4 0 0 chrUextra 17576887 17577585 -11427071 - FW_DM LINE Jockey -2409 2283 1586 1 719 21 57 0 0 chrUextra 17577698 17577733 -11426923 + AT_rich Low_complexity Low_complexity 1 35 0 1 719 269 125 0 0 chrUextra 17577746 17577786 -11426870 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 719 262 150 0 0 chrUextra 17577829 17577869 -11426787 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 719 262 150 0 0 chrUextra 17577921 17577961 -11426695 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 719 262 150 0 0 chrUextra 17578013 17578053 -11426603 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 719 22 56 0 0 chrUextra 17578058 17578094 -11426562 + AT_rich Low_complexity Low_complexity 1 36 0 1 719 1986 0 0 0 chrUextra 17578166 17578383 -11426273 - LSU-rRNA_Dme rRNA rRNA 0 3900 3684 1 719 6023 19 1 1 chrUextra 17578483 17579181 -11425475 - R1_DM LINE R1 -1448 3908 3211 1 719 774 11 0 31 chrUextra 17579281 17579377 -11425279 - NTS_DM Other Other -123 117 25 1 719 22 56 0 0 chrUextra 17579403 17579439 -11425217 + AT_rich Low_complexity Low_complexity 1 36 0 1 719 269 125 0 0 chrUextra 17579452 17579492 -11425164 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 719 262 150 0 0 chrUextra 17579535 17579575 -11425081 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 719 262 150 0 0 chrUextra 17579627 17579667 -11424989 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 719 22 56 0 0 chrUextra 17579672 17579708 -11424948 + AT_rich Low_complexity Low_complexity 1 36 0 1 719 1774 10 0 0 chrUextra 17579780 17579979 -11424677 - LSU-rRNA_Dme rRNA rRNA 0 3900 3702 1 719 3361 0 0 3 chrUextra 17580079 17580450 -11424206 + LSU-rRNA_Dme rRNA rRNA 3531 3900 0 1 719 22 56 0 0 chrUextra 17580522 17580558 -11424098 + AT_rich Low_complexity Low_complexity 1 36 0 1 719 262 150 0 0 chrUextra 17580563 17580603 -11424053 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 719 262 150 0 0 chrUextra 17580655 17580695 -11423961 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 719 5692 19 9 6 chrUextra 17580877 17581575 -11423081 - PROTOP_A DNA P -9 1096 397 1 719 5708 20 9 0 chrUextra 17581675 17582373 -11422283 - PROTOP_A DNA P -163 942 239 1 719 5992 7 0 0 chrUextra 17582473 17583171 -11421485 + STALKER4_I LTR Gypsy 3073 3770 -2760 1 719 5381 27 33 4 chrUextra 17583271 17583969 -11420687 - STALKER4_I LTR Gypsy -2868 3662 2945 1 719 655 50 0 0 chrUextra 17584069 17584149 -11420507 - G5A_DM LINE Jockey -301 2540 2461 1 719 4818 19 3 0 chrUextra 17584145 17584714 -11419942 - DOC2_DM LINE Jockey -3332 1461 891 1 719 2657 23 0 0 chrUextra 17584867 17585172 -11419484 + R1_DM LINE R1 5052 5356 0 1 719 2547 75 47 6 chrUextra 17585205 17585565 -11419091 + R1_DM LINE R1 1 375 -4981 1 719 3497 157 11 13 chrUextra 17585665 17586363 -11418293 + SAR_DM Satellite Satellite 346 1042 -430 1 719 21 89 0 0 chrUextra 17586924 17586980 -11417676 + AT_rich Low_complexity Low_complexity 1 56 0 1 719 1447 0 0 6 chrUextra 17586999 17587161 -11417495 - SSU-rRNA_Dme rRNA rRNA 0 1995 1835 1 719 23 68 0 0 chrUextra 17587521 17587565 -11417091 + AT_rich Low_complexity Low_complexity 1 44 0 1 719 26 30 0 0 chrUextra 17587611 17587644 -11417012 + AT_rich Low_complexity Low_complexity 1 33 0 1 719 2253 167 91 7 chrUextra 17588059 17588498 -11416158 - FW_DM LINE Jockey -3191 1501 1026 1 719 1633 55 18 0 chrUextra 17588498 17588717 -11415939 + FB4_DM DNA Tc1 1 223 -3866 1 719 307 43 22 0 chrUextra 17588711 17588757 -11415899 + DMCR1A LINE CR1 1406 1452 -3018 1 719 758 96 0 0 chrUextra 17588858 17588973 -11415683 - ARS406_DM Unknown Unknown -238 115 1 1 719 3264 181 4 4 chrUextra 17588880 17589555 -11415101 + SAR_DM Satellite Satellite 195 869 -603 1 719 4572 39 28 0 chrUextra 17589655 17590270 -11414386 + PROTOP DNA P 192 823 -3657 1 719 672 23 0 0 chrUextra 17590265 17590353 -11414303 + PROTOP DNA P 3802 3889 -591 1 719 430 0 0 0 chrUextra 17590453 17590512 -11414144 + IDEFIX_LTR LTR Gypsy 536 594 0 1 719 25 0 0 0 chrUextra 17590701 17590726 -11413930 + AT_rich Low_complexity Low_complexity 1 25 0 1 719 708 104 0 0 chrUextra 17591251 17591357 -11413299 - ARS406_DM Unknown Unknown -247 106 1 1 719 3253 174 7 9 chrUextra 17591264 17591949 -11412707 + SAR_DM Satellite Satellite 195 878 -594 1 719 2829 190 10 20 chrUextra 17592049 17592747 -11411909 + SAR_DM Satellite Satellite 1 691 -308 1 719 6281 1 3 1 chrUextra 17592847 17593545 -11411111 - SSU-rRNA_Dme rRNA rRNA -703 1292 594 1 719 6023 9 0 0 chrUextra 17593645 17594343 -11410313 - ROO_I LTR Pao -3151 5105 4408 1 719 290 28 0 0 chrUextra 17594479 17594515 -11410141 + MAX_I LTR Pao 920 955 -6959 1 719 1351 102 97 253 chrUextra 17594553 17595141 -11409515 + MAX_I LTR Pao 938 1433 -6481 1 719 6259 1 3 3 chrUextra 17595241 17595939 -11408717 - SSU-rRNA_Dme rRNA rRNA -248 1747 1050 1 719 5851 1 39 0 chrUextra 17596039 17596737 -11407919 + DM176_I LTR Gypsy 1267 1991 -4429 1 719 21 89 0 0 chrUextra 17596939 17596995 -11407661 + AT_rich Low_complexity Low_complexity 1 56 0 1 719 21 57 0 0 chrUextra 17597033 17597068 -11407588 + AT_rich Low_complexity Low_complexity 1 35 0 1 719 6285 0 3 3 chrUextra 17597635 17598333 -11406323 + SSU-rRNA_Dme rRNA rRNA 997 1694 -301 1 719 6381 1 0 0 chrUextra 17598433 17599131 -11405525 - SSU-rRNA_Dme rRNA rRNA -930 1065 368 1 719 453 141 0 0 chrUextra 17599231 17599302 -11405354 + ARS406_DM Unknown Unknown 119 189 -164 1 719 2493 191 93 29 chrUextra 17599239 17599929 -11404727 - SAR_DM Satellite Satellite -242 1230 497 1 719 3028 23 0 0 chrUextra 17600035 17600381 -11404275 + Invader4_LTR LTR Gypsy 1 346 0 1 719 21 0 0 0 chrUextra 17600381 17600402 -11404254 + AT_rich Low_complexity Low_complexity 1 21 0 1 719 551 0 131 6 chrUextra 17600402 17600723 -11403933 + (TA)n Simple_repeat Simple_repeat 1 361 0 1 719 273 83 0 0 chrUextra 17600845 17600881 -11403775 + PROTOP DNA P 1376 1411 -3069 1 719 2964 50 0 8 chrUextra 17600878 17601261 -11403395 + PROTOP_A DNA P 650 1029 -76 1 719 1559 55 45 0 chrUextra 17601288 17601490 -11403166 - PROTOP_B DNA P -942 211 1 1 719 254 111 0 0 chrUextra 17601490 17601524 -11403132 + PROTOP DNA P 4420 4454 -26 1 719 3312 164 19 10 chrUextra 17601629 17602323 -11402333 + SAR_DM Satellite Satellite 369 1068 -404 1 719 6016 16 1 0 chrUextra 17602423 17603121 -11401535 - PROTOP DNA P -2764 1716 1018 1 719 6295 0 1 3 chrUextra 17603221 17603919 -11400737 + SSU-rRNA_Dme rRNA rRNA 686 1382 -613 1 719 6250 0 1 4 chrUextra 17604019 17604717 -11399939 - SSU-rRNA_Dme rRNA rRNA -601 1394 699 1 719 3036 34 39 3 chrUextra 17605132 17605515 -11399141 - ROO_I LTR Pao -2366 5890 5494 1 719 6284 0 0 0 chrUextra 17605615 17606313 -11398343 - DOC LINE Jockey -2940 1785 1088 1 719 6260 0 0 0 chrUextra 17606413 17607111 -11397545 - DOC LINE Jockey -2821 1904 1207 1 719 2078 59 114 0 chrUextra 17607211 17607725 -11396931 - PROTOP DNA P -243 862 421 1 719 1621 22 0 0 chrUextra 17607725 17607909 -11396747 - PROTOP DNA P 0 4480 4297 1 719 6221 7 7 0 chrUextra 17608010 17608707 -11395949 - Gypsy3_I LTR Gypsy -4397 1780 1079 1 719 277 106 0 21 chrUextra 17608872 17608920 -11395736 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 719 372 49 65 16 chrUextra 17608942 17609004 -11395652 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 719 969 173 102 15 chrUextra 17609003 17609208 -11395448 - DMLTR5 LTR Gypsy 0 266 44 1 719 2445 110 25 13 chrUextra 17609607 17610288 -11394368 - DMSAT6 Satellite Satellite -28 689 1 1 719 454 120 0 62 chrUextra 17610418 17610498 -11394158 + ACCORD2_LTR LTR Gypsy 141 215 0 1 719 2946 79 0 0 chrUextra 17610698 17611092 -11393564 + PROTOP DNA P 2614 3007 -1473 1 719 357 315 0 0 chrUextra 17611265 17611614 -11393042 + (CAGA)n Simple_repeat Simple_repeat 1 349 0 1 719 2804 62 0 5 chrUextra 17612023 17612411 -11392245 - BATUMI_I LTR Pao 0 7963 7578 1 719 1960 77 47 3 chrUextra 17612398 17612697 -11391959 + MDG1_I LTR Gypsy 5303 5614 -982 1 719 2904 168 11 27 chrUextra 17612800 17613493 -11391163 + SAR_DM Satellite Satellite 432 1113 -359 1 719 668 48 0 0 chrUextra 17613595 17613678 -11390978 - R1_DM LINE R1 -31 5325 5243 1 719 5089 24 3 0 chrUextra 17613675 17614293 -11390363 - R1_DM LINE R1 -290 5066 4447 1 719 22 0 0 0 chrUextra 17614489 17614511 -11390145 + AT_rich Low_complexity Low_complexity 1 22 0 1 719 2141 180 47 34 chrUextra 17614538 17615090 -11389566 + Stalker2_I LTR Gypsy 291 849 -6553 1 719 2926 172 8 33 chrUextra 17615208 17615889 -11388767 - SAR_DM Satellite Satellite -1109 663 1 1 719 1369 0 0 6 chrUextra 17616787 17616955 -11387701 - NTS_DM Other Other -73 167 1 1 719 1252 18 0 6 chrUextra 17617037 17617202 -11387454 - NTS_DM Other Other -39 201 38 1 719 870 9 0 27 chrUextra 17617202 17617314 -11387342 - NTS_DM Other Other -107 133 25 1 719 22 56 0 0 chrUextra 17617340 17617376 -11387280 + AT_rich Low_complexity Low_complexity 1 36 0 1 719 255 125 0 0 chrUextra 17617389 17617429 -11387227 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 719 1867 225 0 0 chrUextra 17617585 17618034 -11386622 - BLOOD_I LTR Gypsy -1883 4730 4282 1 719 1419 166 20 7 chrUextra 17618385 17618688 -11385968 + SAR_DM Satellite Satellite 597 903 -569 1 719 657 53 53 0 chrUextra 17618603 17618698 -11385958 - ARS406_DM Unknown Unknown -164 189 90 1 719 1598 184 19 5 chrUextra 17618703 17619081 -11385575 + SAR_DM Satellite Satellite 496 878 -594 1 719 959 22 0 7 chrUextra 17619181 17619318 -11385338 + NTS_DM Other Other 66 201 -39 1 719 870 9 0 27 chrUextra 17619370 17619482 -11385174 + NTS_DM Other Other 25 133 -107 1 719 1252 18 0 6 chrUextra 17619482 17619647 -11385009 + NTS_DM Other Other 38 201 -39 1 719 848 18 0 27 chrUextra 17619699 17619811 -11384845 + NTS_DM Other Other 25 133 -107 1 719 588 0 0 0 chrUextra 17619811 17619879 -11384777 + NTS_DM Other Other 38 105 -135 1 719 482 17 17 0 chrUextra 17619979 17620039 -11384617 - NTS_DM Other Other -179 61 1 1 719 1387 25 20 20 chrUextra 17620039 17620242 -11384414 - NTS_DM Other Other 0 240 38 1 719 817 0 0 0 chrUextra 17620242 17620338 -11384318 - NTS_DM Other Other -107 133 38 1 719 832 9 9 27 chrUextra 17620338 17620449 -11384207 - NTS_DM Other Other -107 133 25 1 719 21 57 0 0 chrUextra 17620475 17620510 -11384146 + AT_rich Low_complexity Low_complexity 1 35 0 1 719 1215 18 6 6 chrUextra 17620510 17620674 -11383982 - NTS_DM Other Other -39 201 38 1 719 23 68 0 0 chrUextra 17621165 17621209 -11383447 + AT_rich Low_complexity Low_complexity 1 44 0 1 719 2003 13 0 0 chrUextra 17621575 17621814 -11382842 - DM1731_I LTR Copia -1838 2138 1900 1 719 3971 9 0 2 chrUextra 17621809 17622273 -11382383 - DM1731_I LTR Copia -2476 1500 1038 1 719 5781 0 0 1 chrUextra 17622373 17623056 -11381600 - LSU-rRNA_Dme rRNA rRNA -3001 899 218 1 719 243 125 0 0 chrUextra 17623222 17623262 -11381394 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 719 22 56 0 0 chrUextra 17623275 17623311 -11381345 + AT_rich Low_complexity Low_complexity 1 36 0 1 719 870 9 0 27 chrUextra 17623337 17623449 -11381207 + NTS_DM Other Other 25 133 -107 1 719 1252 18 0 6 chrUextra 17623449 17623614 -11381042 + NTS_DM Other Other 38 201 -39 1 719 840 9 0 35 chrUextra 17623666 17623779 -11380877 + NTS_DM Other Other 25 133 -107 1 719 770 0 0 0 chrUextra 17623779 17623869 -11380787 + NTS_DM Other Other 38 127 -113 1 719 5482 46 1 1 chrUextra 17624767 17625465 -11379191 + R1_DM LINE R1 1059 1756 -3600 1 719 3015 181 7 10 chrUextra 17625565 17626259 -11378397 - SAR_DM Satellite Satellite -569 903 212 1 719 5901 0 1 0 chrUextra 17626363 17627061 -11377595 - ROO_I LTR Pao -4541 3715 3017 1 719 5831 9 1 0 chrUextra 17627959 17628657 -11375999 + STALKER4_I LTR Gypsy 1973 2671 -3859 1 719 2983 176 7 12 chrUextra 17628757 17629434 -11375222 + SAR_DM Satellite Satellite 403 1076 -396 1 719 5828 10 0 0 chrUextra 17629555 17630253 -11374403 - STALKER4_I LTR Gypsy -3943 2587 1890 1 719 1469 121 57 3 chrUextra 17630384 17630666 -11373990 + DNAREP1_DM LINE Penelope 1 297 -297 1 719 1109 36 42 12 chrUextra 17631949 17632117 -11372539 + (TTCTC)n Simple_repeat Simple_repeat 1 173 0 1 719 651 46 0 0 chrUextra 17632132 17632219 -11372437 + (GAGAA)n Simple_repeat Simple_repeat 2 88 0 1 719 22 56 0 0 chrUextra 17632808 17632844 -11371812 + AT_rich Low_complexity Low_complexity 1 36 0 1 719 952 16 8 0 chrUextra 17633545 17633666 -11370990 + R2_DM LINE R2 3486 3607 0 1 719 433 55 0 0 chrUextra 17633665 17633720 -11370936 + LSU-rRNA_Dme rRNA rRNA 2578 2632 -1268 1 719 3529 55 55 4 chrUextra 17633720 17634213 -11370443 + R1_DM LINE R1 1 518 -4838 1 719 5803 9 1 0 chrUextra 17635141 17635839 -11368817 - STALKER4_I LTR Gypsy -3607 2923 2225 1 719 4063 26 4 0 chrUextra 17635939 17636438 -11368218 - R1_DM LINE R1 -449 4907 4407 1 719 1523 6 0 0 chrUextra 17636458 17636637 -11368019 - R1_DM LINE R1 -1074 4282 4104 1 719 2888 185 9 11 chrUextra 17636737 17637431 -11367225 - SAR_DM Satellite Satellite -569 903 212 1 719 5940 9 0 0 chrUextra 17637535 17638233 -11366423 + R1_DM LINE R1 3855 4552 -804 1 719 5765 20 3 0 chrUextra 17638333 17639031 -11365625 - Gypsy4_I LTR Gypsy -1530 4758 4059 1 719 21 0 0 0 chrUextra 17639131 17639152 -11365504 + AT_rich Low_complexity Low_complexity 1 21 0 1 719 33 43 0 41 chrUextra 17639245 17639318 -11365338 + AT_rich Low_complexity Low_complexity 1 70 0 1 719 423 82 0 0 chrUextra 17639610 17639669 -11364987 - PROTOP_B DNA P 0 1153 1095 1 719 1221 38 44 0 chrUextra 17639669 17639828 -11364828 + PROTOP_B DNA P 1 166 -987 1 719 5861 7 0 1 chrUextra 17639931 17640625 -11364031 + DOC LINE Jockey 4003 4695 -30 1 719 5890 6 1 0 chrUextra 17640725 17641419 -11363237 + STALKER4_I LTR Gypsy 4345 5039 -1491 1 719 3192 161 13 11 chrUextra 17641523 17642219 -11362437 - SAR_DM Satellite Satellite -435 1037 341 1 719 5875 13 0 0 chrUextra 17643116 17643813 -11360843 + ROO_I LTR Pao 5083 5779 -2477 1 719 6060 1 0 0 chrUextra 17643913 17644610 -11360046 - DOC LINE Jockey -652 4073 3377 1 719 5691 23 0 3 chrUextra 17644710 17645407 -11359249 + R1_DM LINE R1 2073 2767 -2589 1 719 2802 0 3 3 chrUextra 17645507 17645832 -11358824 + SSU-rRNA_Dme rRNA rRNA 1671 1995 0 1 719 21 89 0 0 chrUextra 17645851 17645907 -11358749 + AT_rich Low_complexity Low_complexity 1 56 0 1 719 5805 10 1 3 chrUextra 17646304 17647001 -11357655 - R1_DM LINE R1 -845 4511 3816 1 719 5499 13 4 0 chrUextra 17647102 17647798 -11356858 + MAX_I LTR Pao 235 933 -6981 1 719 5988 1 0 0 chrUextra 17647898 17648595 -11356061 + DM176_I LTR Gypsy 3858 4554 -1866 1 719 6100 1 0 0 chrUextra 17648695 17649392 -11355264 + SSU-rRNA_Dme rRNA rRNA 448 1144 -851 1 719 5829 9 0 0 chrUextra 17649492 17650189 -11354467 - QUASIMODO_I LTR Gypsy -2510 3550 2854 1 719 5717 1 1 0 chrUextra 17650289 17650966 -11353690 - LSU-rRNA_Dme rRNA rRNA -3005 895 218 1 719 3319 8 3 0 chrUextra 17651086 17651473 -11353183 - Invader1_LTR LTR Gypsy -35 388 1 1 719 2489 10 3 0 chrUextra 17651473 17651783 -11352873 - Invader1_I LTR Gypsy 0 3186 2876 1 719 2767 168 10 28 chrUextra 17651886 17652564 -11352092 - SAR_DM Satellite Satellite -615 857 192 1 719 705 107 0 0 chrUextra 17652468 17652580 -11352076 + ARS406_DM Unknown Unknown 1 112 -241 1 719 6029 0 1 3 chrUextra 17652680 17653377 -11351279 + SSU-rRNA_Dme rRNA rRNA 1258 1953 -42 1 719 5853 10 1 1 chrUextra 17653477 17654174 -11350482 + R1_DM LINE R1 3607 4303 -1053 1 719 5818 10 0 0 chrUextra 17654274 17654971 -11349685 + MDG1_I LTR Gypsy 3058 3754 -2842 1 719 325 36 70 18 chrUextra 17655073 17655130 -11349526 + HMSBEAGLE_I LTR Gypsy 6 65 -6464 1 719 262 106 0 21 chrUextra 17655152 17655200 -11349456 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 719 1788 213 77 40 chrUextra 17655870 17656561 -11348095 + SAR_DM Satellite Satellite 332 1047 -425 1 719 3223 3 0 60 chrUextra 17656665 17657085 -11347571 - LSU-rRNA_Dme rRNA rRNA -3505 395 1 1 719 21 95 0 0 chrUextra 17657097 17657160 -11347496 + AT_rich Low_complexity Low_complexity 1 63 0 1 719 5703 8 0 0 chrUextra 17657493 17658157 -11346499 - R1_DM LINE R1 -775 4581 3918 1 719 3009 175 9 9 chrUextra 17658280 17658956 -11345700 + SAR_DM Satellite Satellite 326 1001 -471 1 719 2212 107 8 31 chrUextra 17659292 17659682 -11344974 + QUASIMODO_LTR LTR Gypsy 91 607 -51 1 719 469 63 0 0 chrUextra 17659689 17659752 -11344904 + QUASIMODO_I LTR Gypsy 30 92 -5968 1 719 6048 0 3 1 chrUextra 17659853 17660550 -11344106 - LSU-rRNA_Dme rRNA rRNA -57 3843 3146 1 719 4451 2 2 0 chrUextra 17660650 17661161 -11343495 + SSU-rRNA_Dme rRNA rRNA 1484 1995 0 1 719 5156 28 61 19 chrUextra 17661447 17662140 -11342516 - CIRCE LINE Composite -3318 3038 2317 1 719 551 0 0 0 chrUextra 17662244 17662307 -11342349 - SSU-rRNA_Dme rRNA rRNA -1932 63 1 1 719 32 0 0 0 chrUextra 17662439 17662471 -11342185 + AT_rich Low_complexity Low_complexity 1 32 0 1 719 28 48 0 0 chrUextra 17662799 17662841 -11341815 + AT_rich Low_complexity Low_complexity 1 42 0 1 719 5815 21 0 0 chrUextra 17663041 17663738 -11340918 + R1_DM LINE R1 1921 2617 -2739 1 719 1694 273 30 43 chrUextra 17663846 17664535 -11340121 + MAX_I LTR Pao 6562 7241 -673 1 719 6154 0 0 0 chrUextra 17664635 17665332 -11339324 + LSU-rRNA_Dme rRNA rRNA 2888 3584 -316 1 719 2396 106 11 15 chrUextra 17665439 17666109 -11338547 + DMSAT6 Satellite Satellite 1 666 -6 1 719 691 58 29 0 chrUextra 17666230 17666334 -11338322 + ARS406_DM Unknown Unknown 83 189 -164 1 719 2819 174 12 15 chrUextra 17666244 17666904 -11337752 - SAR_DM Satellite Satellite -569 903 246 1 719 369 113 0 0 chrUextra 17666864 17666926 -11337730 + ARS406_DM Unknown Unknown 1 62 -291 1 719 3283 162 10 19 chrUextra 17667027 17667720 -11336936 + SAR_DM Satellite Satellite 369 1055 -417 1 719 2013 0 0 0 chrUextra 17667829 17668051 -11336605 - LSU-rRNA_Dme rRNA rRNA -3678 222 1 1 719 21 95 0 0 chrUextra 17668063 17668126 -11336530 + AT_rich Low_complexity Low_complexity 1 63 0 1 719 34 24 0 0 chrUextra 17668339 17668380 -11336276 + AT_rich Low_complexity Low_complexity 1 41 0 1 719 6181 1 0 0 chrUextra 17668620 17669317 -11335339 - ROO_I LTR Pao -5944 2312 1616 1 719 246 132 0 0 chrUextra 17669495 17669533 -11335123 - PROTOP_B DNA P 0 1153 1116 1 719 475 184 354 0 chrUextra 17669533 17669691 -11334965 - PROTOP_B DNA P 0 1153 940 1 719 37 52 0 0 chrUextra 17669740 17669798 -11334858 + AT_rich Low_complexity Low_complexity 1 58 0 1 719 562 205 0 39 chrUextra 17669948 17670075 -11334581 + STALKER4_I LTR Gypsy 3692 3813 -2717 1 719 234 149 43 0 chrUextra 17670066 17670113 -11334543 + TABOR_I LTR Gypsy 3604 3652 -2684 1 719 3157 181 10 9 chrUextra 17670215 17670911 -11333745 + SAR_DM Satellite Satellite 272 968 -504 1 719 34 24 0 0 chrUextra 17671011 17671052 -11333604 + AT_rich Low_complexity Low_complexity 1 41 0 1 719 22 35 0 0 chrUextra 17671153 17671182 -11333474 + AT_rich Low_complexity Low_complexity 1 29 0 1 719 254 192 41 0 chrUextra 17671379 17671452 -11333204 + (TTATA)n Simple_repeat Simple_repeat 5 80 0 1 719 878 85 7 20 chrUextra 17671808 17672259 -11332397 + RSP Satellite Satellite 1 445 0 1 719 1885 21 4 29 chrUextra 17672263 17672505 -11332151 - G5_DM LINE Jockey 0 4856 4621 1 719 3236 172 17 9 chrUextra 17672606 17673299 -11331357 - SAR_DM Satellite Satellite -428 1044 346 1 719 2081 35 0 4 chrUextra 17673403 17673657 -11330999 - DM1731_LTR LTR Copia -83 253 1 1 719 1927 0 0 22 chrUextra 17673657 17673882 -11330774 - DM1731_I LTR Copia 0 3976 3757 1 719 308 0 0 0 chrUextra 17673894 17673928 -11330728 - DM1731_I LTR Copia -284 3692 3659 1 719 1510 12 0 0 chrUextra 17673926 17674099 -11330557 - DM1731_I LTR Copia -691 3285 3113 1 719 2281 7 4 7 chrUextra 17674199 17674472 -11330184 + IDEFIX_LTR LTR Gypsy 320 591 -3 1 719 551 12 133 5 chrUextra 17674473 17674893 -11329763 + (TA)n Simple_repeat Simple_repeat 1 474 0 1 719 1293 30 6 0 chrUextra 17674996 17675161 -11329495 + STALKER4_I LTR Gypsy 3101 3266 -3264 1 719 2377 4 0 0 chrUextra 17675161 17675437 -11329219 + Copia_LTR LTR Copia 1 276 0 1 719 2283 0 0 0 chrUextra 17675437 17675693 -11328963 + Copia_I LTR Copia 1 256 -4337 1 719 3310 0 0 0 chrUextra 17675793 17676156 -11328500 + NOMAD_LTR LTR Gypsy 156 518 0 1 719 2926 3 3 0 chrUextra 17676156 17676490 -11328166 - ROO_I LTR Pao -3543 4713 4379 1 719 837 0 0 0 chrUextra 17677194 17677287 -11327369 + (TTCTC)n Simple_repeat Simple_repeat 2 94 0 1 719 3238 168 15 12 chrUextra 17677397 17678084 -11326572 - SAR_DM Satellite Satellite -535 937 249 1 719 5767 21 14 0 chrUextra 17678184 17678849 -11325807 - CIRCE LINE Composite -255 6101 5428 1 719 6315 1 1 0 chrUextra 17678981 17679678 -11324978 - DOC LINE Jockey -244 4481 3784 1 719 1929 168 13 7 chrUextra 17679779 17680475 -11324181 + SAR_DM Satellite Satellite 1 699 -677 1 719 3851 79 60 42 chrUextra 17680575 17681272 -11323384 + STALKER4_I LTR Gypsy 5807 6516 -14 1 719 4931 49 119 0 chrUextra 17681372 17682069 -11322587 - TRANSIB2 DNA Transib -1272 1572 793 1 719 6340 6 0 0 chrUextra 17682172 17682866 -11321790 + LINEJ1_DM LINE Jockey 3287 3980 -1040 1 719 953 54 8 30 chrUextra 17682967 17683101 -11321555 + BATUMI_LTR LTR Pao 142 272 0 1 719 37 0 0 0 chrUextra 17683101 17683138 -11321518 + AT_rich Low_complexity Low_complexity 1 37 0 1 719 4096 13 0 0 chrUextra 17683193 17683663 -11320993 - PROTOP_A DNA P 0 1105 636 1 719 6260 0 1 0 chrUextra 17683763 17684460 -11320196 - R1_DM LINE R1 -2193 3163 2466 1 719 3304 176 10 6 chrUextra 17684562 17685254 -11319402 + SAR_DM Satellite Satellite 229 923 -549 1 719 2906 188 17 26 chrUextra 17685361 17686054 -11318602 + SAR_DM Satellite Satellite 1 686 -216 1 719 2816 177 21 29 chrUextra 17686154 17686851 -11317805 + SAR_DM Satellite Satellite 466 1157 -315 1 719 574 137 11 0 chrUextra 17686969 17687064 -11317592 - DMCR1A LINE CR1 -4010 460 365 1 719 592 127 36 0 chrUextra 17687059 17687169 -11317487 - DMCR1A LINE CR1 -4350 120 7 1 719 246 191 0 0 chrUextra 17687236 17687283 -11317373 + DMCR1A LINE CR1 744 790 -3680 1 719 292 189 0 0 chrUextra 17687415 17687468 -11317188 + NOMAD_I LTR Gypsy 6520 6572 0 1 719 5906 23 6 4 chrUextra 17687748 17688445 -11316211 - CIRCE LINE Composite -2740 3616 2919 1 719 925 93 0 0 chrUextra 17689342 17689481 -11315175 - ARS406_DM Unknown Unknown -214 139 1 1 719 3092 176 13 10 chrUextra 17689362 17690039 -11314617 + SAR_DM Satellite Satellite 167 845 -627 1 719 5467 36 17 0 chrUextra 17690139 17690836 -11313820 - IDEFIX_I LTR Gypsy -4597 1031 323 1 719 5774 13 6 3 chrUextra 17690936 17691633 -11313023 + Invader2_I LTR Gypsy 2683 3381 -1211 1 719 21 57 0 0 chrUextra 17691794 17691829 -11312827 + AT_rich Low_complexity Low_complexity 1 35 0 1 719 1143 144 64 5 chrUextra 17691870 17692073 -11312583 - DNAREP1_DM LINE Penelope -358 236 22 1 719 2734 195 40 9 chrUextra 17692530 17693213 -11311443 + SAR_DM Satellite Satellite 415 1118 -354 1 719 334 176 82 0 chrUextra 17693142 17693227 -11311429 - XDMR_DM Unknown Unknown -7 353 262 1 719 2749 189 27 23 chrUextra 17693327 17694024 -11310632 - SAR_DM Satellite Satellite -321 1151 452 1 89 5984 25 0 3 chrUextra 17694124 17694821 -11309835 - R1_DM LINE R1 -2995 2361 1667 1 720 2269 0 4 0 chrUextra 17694921 17695170 -11309486 + SSU-rRNA_Dme rRNA rRNA 1746 1995 0 1 720 1503 29 0 0 chrUextra 17695718 17695889 -11308767 + R1_DM LINE R1 5186 5356 0 1 720 4683 13 0 0 chrUextra 17695887 17696415 -11308241 + LSU-rRNA_Dme rRNA rRNA 2640 3167 -733 1 720 2099 164 10 10 chrUextra 17696515 17696933 -11307723 + SAR_DM Satellite Satellite 630 1047 -425 1 720 1243 182 11 0 chrUextra 17696949 17697212 -11307444 + SAR_DM Satellite Satellite 543 808 -664 1 720 3129 168 32 16 chrUextra 17698115 17698806 -11305850 + SAR_DM Satellite Satellite 332 1033 -439 1 720 1596 92 355 18 chrUextra 17698906 17699392 -11305264 + R1-2_DM LINE R1 48 697 -2519 1 720 1409 110 59 5 chrUextra 17699383 17699603 -11305053 + R1-2_DM LINE R1 814 1045 -2171 1 720 3389 157 12 14 chrUextra 17699710 17700400 -11304256 + SAR_DM Satellite Satellite 332 1019 -453 1 720 5936 29 4 0 chrUextra 17700500 17701197 -11303459 + R1_DM LINE R1 2234 2933 -2423 1 720 471 18 0 0 chrUextra 17701297 17701353 -11303303 + PROTOP_B DNA P 881 936 -217 1 720 293 50 0 0 chrUextra 17701346 17701406 -11303250 + PROTOP_B DNA P 572 631 -522 1 720 2392 58 13 0 chrUextra 17701411 17701724 -11302932 + PROTOP_B DNA P 794 1110 -43 1 720 1052 140 190 0 chrUextra 17701721 17701942 -11302714 - DMCR1A LINE CR1 -1125 3345 3083 1 720 6016 21 4 0 chrUextra 17702094 17702791 -11301865 - R1_DM LINE R1 -2586 2770 2071 1 720 397 121 0 0 chrUextra 17702898 17702956 -11301700 - HETRP_DM Satellite Satellite -286 1586 1529 1 720 669 206 42 7 chrUextra 17703118 17703260 -11301396 - HETRP_DM Satellite Satellite -197 1675 1529 1 720 748 172 14 14 chrUextra 17703418 17703565 -11301091 - HETRP_DM Satellite Satellite -197 1675 1529 1 720 3129 172 13 24 chrUextra 17703688 17704385 -11300271 + SAR_DM Satellite Satellite 418 1106 -366 1 720 6316 6 0 0 chrUextra 17705282 17705979 -11298677 + LSU-rRNA_Dme rRNA rRNA 1878 2574 -1326 1 720 5985 24 1 0 chrUextra 17706079 17706776 -11297880 + R1_DM LINE R1 1483 2180 -3176 1 720 459 205 31 39 chrUextra 17706876 17707003 -11297653 - Gypsy_LTR LTR Gypsy -356 126 1 1 720 3085 157 19 45 chrUextra 17707674 17708369 -11296287 - SAR_DM Satellite Satellite -601 871 195 1 720 1929 71 0 0 chrUextra 17708493 17708759 -11295897 - TAHRE LINE telomeric -12 10451 10186 1 720 756 82 36 0 chrUextra 17708755 17708865 -11295791 - TART LINE telomeric -4140 10337 10224 1 720 1919 81 148 3 chrUextra 17708868 17709165 -11295491 - TART LINE telomeric -6638 7839 7500 1 720 4545 27 88 0 chrUextra 17709267 17709855 -11294801 + IDEFIX_I LTR Gypsy 828 1467 -4161 1 720 901 27 0 0 chrUextra 17709852 17709964 -11294692 + IDEFIX_I LTR Gypsy 2352 2463 -3165 1 720 2848 189 11 16 chrUextra 17710065 17710761 -11293895 + SAR_DM Satellite Satellite 1 692 -308 1 720 3029 45 11 67 chrUextra 17710868 17711301 -11293355 - Baggins1 LINE LOA -4902 551 143 1 720 877 9 0 35 chrUextra 17711661 17711774 -11292882 + NTS_DM Other Other 25 133 -107 1 720 1233 30 0 12 chrUextra 17711774 17711940 -11292716 + NTS_DM Other Other 38 201 -39 1 720 850 56 0 0 chrUextra 17711996 17712104 -11292552 + NTS_DM Other Other 26 133 -107 1 720 1080 79 0 18 chrUextra 17712104 17712271 -11292385 + NTS_DM Other Other 38 201 -39 1 720 5332 40 7 0 chrUextra 17712457 17713152 -11291504 + MDG1_I LTR Gypsy 5541 6240 -356 1 720 5716 33 0 1 chrUextra 17713254 17713949 -11290707 - MDG1_I LTR Gypsy -2692 3904 3211 1 720 272 232 36 12 chrUextra 17714086 17714169 -11290487 + TV1I LTR Gypsy 5903 5962 -1 1 720 3276 181 6 6 chrUextra 17714846 17715540 -11289116 + SAR_DM Satellite Satellite 198 891 -581 1 720 3897 137 15 6 chrUextra 17715643 17716313 -11288343 - TART LINE telomeric -4852 9625 8950 1 720 306 105 0 50 chrUextra 17716488 17716548 -11288108 - Stalker2_I LTR Gypsy -7345 57 1 1 720 345 25 0 0 chrUextra 17716548 17716575 -11288081 - STALKER4_I LTR Gypsy -6503 27 1 1 720 3561 7 0 2 chrUextra 17716575 17716978 -11287678 - STALKER4_LTR LTR Gypsy 0 402 1 1 720 1254 55 6 0 chrUextra 17716978 17717137 -11287519 + FW_DM LINE Jockey 400 559 -4133 1 720 4475 0 4 0 chrUextra 17717239 17717731 -11286925 + SSU-rRNA_Dme rRNA rRNA 1502 1995 0 1 720 21 89 0 0 chrUextra 17717750 17717806 -11286850 + AT_rich Low_complexity Low_complexity 1 56 0 1 720 4307 30 3 149 chrUextra 17718034 17718731 -11285925 + CIRCE LINE Composite 5012 5606 -750 1 720 5911 32 0 0 chrUextra 17718831 17719528 -11285128 + R1_DM LINE R1 2296 2992 -2364 1 720 5877 9 0 0 chrUextra 17719628 17720325 -11284331 + DM297_I LTR Gypsy 1057 1753 -4414 1 720 6288 1 0 0 chrUextra 17720425 17721122 -11283534 + R1_DM LINE R1 1174 1870 -3486 1 720 1059 213 4 4 chrUextra 17721223 17721463 -11283193 - Stalker2_I LTR Gypsy -6872 530 291 1 720 25 0 0 0 chrUextra 17721487 17721512 -11283144 + AT_rich Low_complexity Low_complexity 1 25 0 1 720 2256 69 2 20 chrUextra 17721600 17721919 -11282737 - STALKER4_LTR LTR Gypsy -3 399 94 1 720 5950 36 0 0 chrUextra 17722019 17722714 -11281942 - BATUMI_I LTR Pao -3645 4318 3624 1 720 2918 180 10 11 chrUextra 17722819 17723512 -11281144 - SAR_DM Satellite Satellite -569 903 212 1 720 335 0 0 0 chrUextra 17723615 17723656 -11281000 - PROTOP_B DNA P -590 563 523 1 720 2494 51 9 0 chrUextra 17723671 17724007 -11280649 - PROTOP_B DNA P -743 410 73 1 720 611 161 0 26 chrUextra 17724424 17724539 -11280117 - TAHRE LINE telomeric -9436 1027 916 1 720 2358 178 14 28 chrUextra 17724540 17725105 -11279551 - TAHRE LINE telomeric -9661 802 263 1 720 5886 9 0 0 chrUextra 17725207 17725904 -11278752 + FW_DM LINE Jockey 513 1209 -3483 1 720 498 0 0 0 chrUextra 17726004 17726061 -11278595 - SSU-rRNA_Dme rRNA rRNA -1938 57 1 1 720 32 0 0 0 chrUextra 17726193 17726225 -11278431 + AT_rich Low_complexity Low_complexity 1 32 0 1 720 28 48 0 0 chrUextra 17726553 17726595 -11278061 + AT_rich Low_complexity Low_complexity 1 42 0 1 720 2262 181 76 36 chrUextra 17726801 17727498 -11277158 - SAR_DM Satellite Satellite -265 1207 483 1 720 2906 188 23 23 chrUextra 17727598 17728293 -11276363 - SAR_DM Satellite Satellite -470 695 1 1 720 5533 30 29 0 chrUextra 17728395 17729092 -11275564 - FW_DM LINE Jockey -3972 720 4 1 720 645 56 0 0 chrUextra 17729192 17729282 -11275374 + (CTTAT)n Simple_repeat Simple_repeat 2 91 0 1 720 624 0 0 0 chrUextra 17729989 17730061 -11274595 - MDG1_I LTR Gypsy -5853 743 672 1 720 2144 95 34 11 chrUextra 17730058 17730411 -11274245 - MDG1_I LTR Gypsy -6235 361 1 1 720 1826 98 0 4 chrUextra 17730411 17730686 -11273970 - MDG1_LTR LTR Gypsy -30 412 139 1 720 967 275 32 25 chrUextra 17730788 17731483 -11273173 + STALKER4_I LTR Gypsy 2522 3480 -3050 1 720 5368 35 0 12 chrUextra 17731592 17732280 -11272376 + DMCR1A LINE CR1 1983 2662 -1808 1 720 278 148 33 33 chrUextra 17732380 17732471 -11272185 + XDMR_DM Unknown Unknown 260 350 -10 1 720 3199 266 14 51 chrUextra 17732394 17733859 -11270797 - SAR_DM Satellite Satellite -353 1411 1 1 720 213 39 0 0 chrUextra 17734238 17734264 -11270392 + (TC)n Simple_repeat Simple_repeat 1 26 0 1 720 29 28 0 0 chrUextra 17736229 17736265 -11268391 + AT_rich Low_complexity Low_complexity 1 36 0 1 720 360 204 0 19 chrUextra 17736370 17736475 -11268181 + XDMR_DM Unknown Unknown 258 360 0 1 720 2757 180 7 24 chrUextra 17736389 17737062 -11267594 - SAR_DM Satellite Satellite -354 1118 457 1 720 247 0 0 0 chrUextra 17737828 17737859 -11266797 + PROTOP_B DNA P 1 31 -1122 1 720 6080 3 0 0 chrUextra 17737959 17738656 -11266000 - LSU-rRNA_Dme rRNA rRNA -498 3402 2706 1 720 1554 43 0 3 chrUextra 17738756 17739453 -11265203 + (AATAG)n Simple_repeat Simple_repeat 1 694 0 1 720 586 0 92 0 chrUextra 17740174 17740250 -11264406 + PROTOP_B DNA P 1 83 -1070 1 720 5659 1 3 1 chrUextra 17740350 17741047 -11263609 + QUASIMODO_I LTR Gypsy 4283 4980 -1080 1 720 1836 8 17 13 chrUextra 17741189 17741428 -11263228 + NTS_DM Other Other 1 240 0 1 720 1009 8 0 0 chrUextra 17741428 17741546 -11263110 + NTS_DM Other Other 1 118 -122 1 720 239 54 0 26 chrUextra 17741546 17741584 -11263072 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 720 870 9 0 27 chrUextra 17741641 17741753 -11262903 + NTS_DM Other Other 25 133 -107 1 720 777 0 0 0 chrUextra 17741753 17741844 -11262812 + NTS_DM Other Other 38 128 -112 1 720 3078 77 79 13 chrUextra 17741944 17742641 -11262015 + Gypsy12_I LTR Gypsy 4677 5419 -127 1 720 2386 124 12 5 chrUextra 17742783 17743438 -11261218 + DMSAT6 Satellite Satellite 1 659 0 1 720 2974 170 21 9 chrUextra 17743539 17744214 -11260442 - SAR_DM Satellite Satellite -464 1008 326 1 720 887 19 0 0 chrUextra 17744336 17744442 -11260214 + R1_DM LINE R1 3554 3659 -1697 1 720 4239 32 2 0 chrUextra 17744440 17744963 -11259693 + R1_DM LINE R1 4833 5356 0 1 720 272 28 0 0 chrUextra 17744996 17745032 -11259624 + R1_DM LINE R1 1 36 -5320 1 720 545 301 20 24 chrUextra 17745572 17745827 -11258829 + HMSBEAGLE_I LTR Gypsy 1440 1693 -4836 1 720 5225 25 0 29 chrUextra 17745929 17746626 -11258030 + CIRCE LINE Composite 4175 4851 -1505 1 720 3106 31 0 0 chrUextra 17746726 17747109 -11257547 - MDG1_I LTR Gypsy -1847 4749 4367 1 720 2612 34 0 3 chrUextra 17747095 17747423 -11257233 - MDG1_I LTR Gypsy -2425 4171 3845 1 720 5917 7 1 3 chrUextra 17747523 17748220 -11256436 + SSU-rRNA_Dme rRNA rRNA 656 1351 -644 1 720 1912 21 29 0 chrUextra 17748320 17748563 -11256093 + R1_DM LINE R1 4817 5066 -290 1 720 922 44 0 0 chrUextra 17748560 17748674 -11255982 + R1_DM LINE R1 5243 5356 0 1 720 2141 69 7 7 chrUextra 17748707 17749015 -11255641 + R1_DM LINE R1 1 308 -5048 1 720 1179 0 0 0 chrUextra 17749117 17749248 -11255408 + (CACAA)n Simple_repeat Simple_repeat 3 133 0 1 720 4682 11 0 0 chrUextra 17749250 17749814 -11254842 + DMRT1B LINE R1 638 1201 -3982 1 720 5810 1 4 0 chrUextra 17749914 17750611 -11254045 - ROO_I LTR Pao -4267 3989 3290 1 720 1464 6 0 0 chrUextra 17750711 17750880 -11253776 - LSU-rRNA_Dme rRNA rRNA -1092 2808 2640 1 720 531 0 0 0 chrUextra 17750878 17750939 -11253717 - R1_DM LINE R1 0 5356 5296 1 720 4114 2 0 0 chrUextra 17750936 17751408 -11253248 - LSU-rRNA_Dme rRNA rRNA -1249 2651 2180 1 720 28 48 0 0 chrUextra 17751598 17751640 -11253016 + AT_rich Low_complexity Low_complexity 1 42 0 1 720 32 0 0 0 chrUextra 17751968 17752000 -11252656 + AT_rich Low_complexity Low_complexity 1 32 0 1 720 642 0 0 0 chrUextra 17752132 17752205 -11252451 + SSU-rRNA_Dme rRNA rRNA 1 73 -1922 1 720 2719 171 45 20 chrUextra 17752309 17752961 -11251695 - SAR_DM Satellite Satellite -620 852 185 1 720 702 164 7 0 chrUextra 17752859 17752999 -11251657 + ARS406_DM Unknown Unknown 1 141 -212 1 720 5128 47 36 0 chrUextra 17753102 17753799 -11250857 + TART LINE telomeric 2160 2881 -11596 1 720 319 309 40 40 chrUextra 17753906 17754301 -11250355 - BLASTOPIA_I LTR Gypsy -2302 2586 2180 1 720 27 29 0 0 chrUextra 17754778 17754812 -11249844 + AT_rich Low_complexity Low_complexity 1 34 0 1 720 752 37 0 115 chrUextra 17755135 17755257 -11249399 + Baggins1 LINE LOA 5346 5453 0 1 720 3170 36 36 0 chrUextra 17755493 17755905 -11248751 + R1_DM LINE R1 4928 5354 -2 1 720 1748 68 12 0 chrUextra 17755940 17756190 -11248466 + R1_DM LINE R1 1 253 -5103 1 720 1559 216 77 44 chrUextra 17756291 17756979 -11247677 + SAR_DM Satellite Satellite 284 994 -478 1 720 5885 0 0 0 chrUextra 17757884 17758581 -11246075 - DM412 LTR Gypsy -1341 5556 4860 1 720 5832 7 3 9 chrUextra 17758681 17759378 -11245278 + Gypsy6_I LTR Gypsy 1868 2560 -4452 1 720 5863 1 1 0 chrUextra 17759478 17760175 -11244481 + DM176_I LTR Gypsy 1907 2604 -3816 1 720 5781 3 0 0 chrUextra 17760279 17760972 -11243684 - ROO_I LTR Pao -4188 4068 3376 1 720 2745 158 9 10 chrUextra 17761072 17761769 -11242887 - SAR_DM Satellite Satellite -1006 695 1 1 720 3288 3 0 0 chrUextra 17761869 17762259 -11242397 + QUASIMODO_I LTR Gypsy 3864 4253 -1807 1 720 2439 16 0 10 chrUextra 17762259 17762566 -11242090 - ROVER-LTR_DM LTR Gypsy 0 367 64 1 720 3068 167 16 16 chrUextra 17762667 17763361 -11241295 + SAR_DM Satellite Satellite 230 923 -549 1 720 5903 0 1 1 chrUextra 17763463 17764160 -11240496 - R1_DM LINE R1 -3692 1664 968 1 720 3666 82 67 34 chrUextra 17764260 17764957 -11239699 + STALKER4_I LTR Gypsy 661 1380 -5150 1 720 1687 5 18 18 chrUextra 17765057 17765283 -11239373 + NTS_DM Other Other 15 240 0 1 720 1741 17 17 17 chrUextra 17765283 17765523 -11239133 + NTS_DM Other Other 1 240 0 1 720 1596 35 17 17 chrUextra 17765523 17765754 -11238902 + NTS_DM Other Other 1 231 -9 1 720 5608 30 0 6 chrUextra 17765854 17766551 -11238105 - BATUMI_I LTR Pao -2406 5557 4865 1 720 5977 1 0 0 chrUextra 17766651 17767348 -11237308 + R1_DM LINE R1 2449 3145 -2211 1 720 1391 0 0 0 chrUextra 17768245 17768413 -11236243 - ROVER-LTR_DM LTR Gypsy -198 169 2 1 720 180 0 0 0 chrUextra 17768413 17768433 -11236223 + (TA)n Simple_repeat Simple_repeat 1 20 0 1 720 3360 5 7 7 chrUextra 17768433 17768846 -11235810 + DM297_LTR LTR Gypsy 2 414 0 1 720 784 21 0 0 chrUextra 17768846 17768942 -11235714 + DM297_I LTR Gypsy 1 96 -6071 1 720 5840 1 3 0 chrUextra 17769042 17769739 -11234917 + DOC LINE Jockey 616 1314 -3411 1 720 2922 187 10 7 chrUextra 17769843 17770533 -11234123 + SAR_DM Satellite Satellite 267 958 -514 1 720 5799 9 1 3 chrUextra 17770636 17771333 -11233323 + R1_DM LINE R1 3555 4250 -1106 1 720 5842 3 1 1 chrUextra 17771437 17772130 -11232526 - R1_DM LINE R1 -3757 1599 907 1 720 5968 6 0 0 chrUextra 17772230 17772927 -11231729 + R1_DM LINE R1 1755 2451 -2905 1 720 5870 9 0 0 chrUextra 17773027 17773724 -11230932 - STALKER4_I LTR Gypsy -4006 2524 1828 1 720 4498 37 73 0 chrUextra 17773832 17774459 -11230197 + PROTOP DNA P 48 720 -3760 1 720 5829 1 0 0 chrUextra 17774621 17775318 -11229338 - DM176_I LTR Gypsy -4963 1457 761 1 720 1654 18 17 17 chrUextra 17775418 17775648 -11229008 + NTS_DM Other Other 11 240 0 1 720 1825 8 17 13 chrUextra 17775648 17775887 -11228769 + NTS_DM Other Other 1 240 0 1 720 1656 18 13 18 chrUextra 17775887 17776112 -11228544 + NTS_DM Other Other 1 224 -16 1 720 3123 159 17 16 chrUextra 17776215 17776910 -11227746 - SAR_DM Satellite Satellite -484 988 293 1 720 2538 107 7 26 chrUextra 17777012 17777708 -11226948 - DMSAT6 Satellite Satellite -222 682 1 1 720 879 90 6 18 chrUextra 17777809 17778506 -11226150 - RSP Satellite Satellite -56 688 1 1 720 5713 10 19 0 chrUextra 17778606 17779302 -11225354 - Invader2_I LTR Gypsy -3522 1070 362 1 720 2728 194 25 6 chrUextra 17779424 17780099 -11224557 + SAR_DM Satellite Satellite 326 1013 -459 1 720 3070 199 6 4 chrUextra 17780200 17780878 -11223778 - Stalker2_I LTR Gypsy -2925 4477 3799 1 720 6044 1 0 0 chrUextra 17780997 17781694 -11222962 + FW_DM LINE Jockey 689 1385 -3307 1 720 870 9 0 27 chrUextra 17781810 17781922 -11222734 + NTS_DM Other Other 25 133 -107 1 720 1252 18 0 6 chrUextra 17781922 17782087 -11222569 + NTS_DM Other Other 38 201 -39 1 720 843 18 0 27 chrUextra 17782139 17782251 -11222405 + NTS_DM Other Other 25 133 -107 1 720 1252 18 0 6 chrUextra 17782251 17782416 -11222240 + NTS_DM Other Other 38 201 -39 1 720 5876 1 0 13 chrUextra 17782591 17783288 -11221368 - DOC LINE Jockey -3876 849 162 1 720 3684 16 11 0 chrUextra 17783388 17783834 -11220822 - LSU-rRNA_Dme rRNA rRNA -810 3090 2640 1 720 2081 28 0 0 chrUextra 17783832 17784084 -11220572 - R1_DM LINE R1 0 5356 5105 1 720 2429 82 10 30 chrUextra 17784185 17784881 -11219775 + DMSAT6 Satellite Satellite 1 681 -40 1 720 836 121 16 20 chrUextra 17784985 17785679 -11218977 + RSP Satellite Satellite 1 690 0 1 720 551 176 81 51 chrUextra 17786235 17786432 -11218224 + DMCR1A LINE CR1 4227 4429 -41 1 720 242 56 0 0 chrUextra 17786439 17786475 -11218181 - Gypsy12_LTR LTR Gypsy -1400 936 901 1 720 792 233 19 103 chrUextra 17787372 17787750 -11216906 + XDMR_DM Unknown Unknown 6 351 -9 1 720 2547 174 7 4 chrUextra 17787516 17788068 -11216588 - SAR_DM Satellite Satellite -545 927 374 1 720 2789 192 10 7 chrUextra 17788168 17788845 -11215811 - SAR_DM Satellite Satellite -599 873 195 1 720 550 144 9 18 chrUextra 17788751 17788864 -11215792 + ARS406_DM Unknown Unknown 1 112 -241 1 720 1789 315 6 6 chrUextra 17788968 17789660 -11214996 - GTWIN_I LTR Gypsy -3010 3411 2720 1 720 284 294 20 20 chrUextra 17790846 17790995 -11213661 + Invader3_I LTR Gypsy 3263 3421 -1467 1 720 5578 24 42 0 chrUextra 17791352 17792048 -11212608 - NINJA_I LTR Pao -2559 3452 2728 1 720 26 50 0 0 chrUextra 17792194 17792234 -11212422 + AT_rich Low_complexity Low_complexity 1 40 0 1 720 3443 35 0 2 chrUextra 17792269 17792698 -11211958 + ROO_LTR LTR Pao 1 428 0 1 720 601 83 18 44 chrUextra 17792731 17792844 -11211812 + ROO_I LTR Pao 114 223 -8033 1 720 3995 28 0 6 chrUextra 17792945 17793445 -11211211 - G2_DM LINE Jockey -1195 1907 1411 1 720 25 65 0 0 chrUextra 17793594 17793640 -11211016 + AT_rich Low_complexity Low_complexity 1 46 0 1 720 5698 24 0 0 chrUextra 17793740 17794436 -11210220 + R1_DM LINE R1 2185 2880 -2476 1 720 246 150 0 0 chrUextra 17794555 17794595 -11210061 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 720 246 150 0 0 chrUextra 17794647 17794687 -11209969 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 720 255 125 0 0 chrUextra 17794730 17794770 -11209886 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 720 22 56 0 0 chrUextra 17794783 17794819 -11209837 + AT_rich Low_complexity Low_complexity 1 36 0 1 720 870 9 0 27 chrUextra 17794845 17794957 -11209699 + NTS_DM Other Other 25 133 -107 1 720 1222 18 0 12 chrUextra 17794957 17795123 -11209533 + NTS_DM Other Other 38 201 -39 1 720 435 0 0 53 chrUextra 17795175 17795232 -11209424 + NTS_DM Other Other 25 78 -162 1 720 6018 3 0 0 chrUextra 17795332 17796028 -11208628 + FW_DM LINE Jockey 3493 4188 -504 1 720 2065 20 0 4 chrUextra 17796128 17796383 -11208273 + MDG1_LTR LTR Gypsy 189 442 0 1 720 1370 172 28 23 chrUextra 17796403 17796823 -11207833 - Gypsy10_I LTR Gypsy -2561 2717 1952 1 720 1003 0 8 0 chrUextra 17796924 17797041 -11207615 + LSU-rRNA_Dme rRNA rRNA 3783 3900 0 1 720 27 29 0 0 chrUextra 17797113 17797147 -11207509 + AT_rich Low_complexity Low_complexity 1 34 0 1 720 246 150 0 0 chrUextra 17797152 17797192 -11207464 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 720 246 150 0 0 chrUextra 17797244 17797284 -11207372 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 720 246 150 0 0 chrUextra 17797336 17797376 -11207280 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 720 255 125 0 0 chrUextra 17797419 17797459 -11207197 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 720 22 56 0 0 chrUextra 17797472 17797508 -11207148 + AT_rich Low_complexity Low_complexity 1 36 0 1 720 643 24 0 35 chrUextra 17797534 17797620 -11207036 + NTS_DM Other Other 25 107 -133 1 720 27 62 0 0 chrUextra 17797799 17797847 -11206809 + AT_rich Low_complexity Low_complexity 1 48 0 1 720 371 181 75 19 chrUextra 17797892 17797999 -11206657 + Copia_I LTR Copia 4401 4513 -80 1 720 4452 129 0 0 chrUextra 17798516 17799212 -11205444 - HMSBEAGLE_I LTR Gypsy -738 5791 5096 1 720 295 109 0 0 chrUextra 17799336 17799382 -11205274 - HMSBEAGLE_I LTR Gypsy -124 6405 6360 1 720 1176 184 55 69 chrUextra 17799645 17800006 -11204650 - HMSBEAGLE_I LTR Gypsy -161 6368 6013 1 720 4863 0 0 42 chrUextra 17800188 17800804 -11203852 + LSU-rRNA_Dme rRNA rRNA 1 590 -3310 1 720 5210 29 3 10 chrUextra 17800904 17801578 -11203078 + BATUMI_I LTR Pao 2906 3574 -4389 1 720 4961 51 20 14 chrUextra 17801700 17802396 -11202260 + R1_DM LINE R1 165 864 -4492 1 720 34 24 0 0 chrUextra 17802889 17802930 -11201726 + AT_rich Low_complexity Low_complexity 1 41 0 1 720 5583 33 0 0 chrUextra 17803292 17803988 -11200668 + R1_DM LINE R1 2454 3149 -2207 1 720 5803 20 0 0 chrUextra 17804088 17804784 -11199872 - R1_DM LINE R1 -2776 2580 1885 1 720 5863 0 0 1 chrUextra 17804884 17805580 -11199076 + LSU-rRNA_Dme rRNA rRNA 230 924 -2976 1 720 6016 1 0 3 chrUextra 17805680 17806376 -11198280 - LSU-rRNA_Dme rRNA rRNA -732 3168 2475 1 720 3104 174 12 7 chrUextra 17806477 17807166 -11197490 + SAR_DM Satellite Satellite 246 937 -535 1 720 205 111 60 60 chrUextra 17807278 17807345 -11197311 + A-rich Low_complexity Low_complexity 3 69 0 1 720 1662 291 0 0 chrUextra 17807419 17807968 -11196688 + ROVER-I_DM LTR Gypsy 890 1438 -5146 1 720 2083 12 0 0 chrUextra 17808068 17808311 -11196345 + PROTOP_A DNA P 863 1105 0 1 720 1029 81 0 0 chrUextra 17808311 17808451 -11196205 - TART LINE telomeric -13756 721 582 1 720 1246 146 80 86 chrUextra 17808450 17808764 -11195892 + TART LINE telomeric 6042 6353 -8124 1 720 3160 173 7 6 chrUextra 17808864 17809560 -11195096 - SAR_DM Satellite Satellite -399 1073 377 1 720 5860 0 0 0 chrUextra 17809668 17810356 -11194300 + LSU-rRNA_Dme rRNA rRNA 218 905 -2995 1 720 1359 191 29 59 chrUextra 17810561 17811005 -11193651 + Gypsy_LTR LTR Gypsy 1 431 -51 1 720 5717 16 1 1 chrUextra 17811252 17811948 -11192708 + R1_DM LINE R1 3638 4333 -1023 1 720 5458 9 68 0 chrUextra 17812048 17812744 -11191912 + STALKER4_I LTR Gypsy 2989 3731 -2799 1 720 1222 18 0 12 chrUextra 17812882 17813048 -11191608 - NTS_DM Other Other -39 201 38 1 720 870 9 0 27 chrUextra 17813048 17813160 -11191496 - NTS_DM Other Other -107 133 25 1 720 22 56 0 0 chrUextra 17813186 17813222 -11191434 + AT_rich Low_complexity Low_complexity 1 36 0 1 720 255 125 0 0 chrUextra 17813235 17813275 -11191381 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 720 246 150 0 0 chrUextra 17813318 17813358 -11191298 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 720 246 150 0 0 chrUextra 17813401 17813441 -11191215 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 720 246 150 0 0 chrUextra 17813493 17813533 -11191123 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 720 5700 19 7 0 chrUextra 17813640 17814336 -11190320 + ACCORD2_I LTR Gypsy 4293 4993 -2219 1 720 6123 1 0 0 chrUextra 17815232 17815928 -11188728 - LINEJ1_DM LINE Jockey -629 4391 3696 1 720 297 0 0 0 chrUextra 17816028 17816061 -11188595 + (GAGAA)n Simple_repeat Simple_repeat 2 34 0 1 720 1033 68 74 6 chrUextra 17816824 17816987 -11187669 - DMCR1A LINE CR1 -4027 443 270 1 720 41 0 0 0 chrUextra 17817479 17817520 -11187136 + AT_rich Low_complexity Low_complexity 1 41 0 1 720 2366 0 4 4 chrUextra 17817620 17817896 -11186760 + SSU-rRNA_Dme rRNA rRNA 1720 1995 0 1 720 21 89 0 0 chrUextra 17817915 17817971 -11186685 + AT_rich Low_complexity Low_complexity 1 56 0 1 720 635 307 42 35 chrUextra 17818679 17819100 -11185556 - GTWIN_I LTR Gypsy -2883 3538 2969 1 720 1732 112 76 63 chrUextra 17819235 17819908 -11184748 + TAHRE LINE telomeric 10186 10663 -3814 1 720 5762 19 0 1 chrUextra 17820008 17820704 -11183952 - IDEFIX_I LTR Gypsy -3285 2343 1649 1 720 5621 24 6 0 chrUextra 17820804 17821500 -11183156 - R1_DM LINE R1 -2316 3040 2341 1 720 5975 0 0 0 chrUextra 17821600 17822296 -11182360 + DMRT1B LINE R1 2527 3222 -1961 1 720 1878 13 0 0 chrUextra 17822400 17822626 -11182030 + NINJA_I LTR Pao 5786 6011 0 1 720 2431 32 0 28 chrUextra 17822626 17822949 -11181707 + NINJA_LTR LTR Pao 1 314 -3 1 720 5852 20 0 0 chrUextra 17823192 17823888 -11180768 - Gypsy4_I LTR Gypsy -2106 4182 3487 1 720 28 48 0 0 chrUextra 17824143 17824185 -11180471 + AT_rich Low_complexity Low_complexity 1 42 0 1 720 32 0 0 0 chrUextra 17824513 17824545 -11180111 + AT_rich Low_complexity Low_complexity 1 32 0 1 720 5524 32 9 1 chrUextra 17824784 17825477 -11179179 + R1_DM LINE R1 2828 3525 -1831 1 11 4077 112 109 0 chrUextra 17825581 17826276 -11178380 + TART_B1 LINE telomeric 5547 6317 -4337 1 721 1222 18 0 12 chrUextra 17826424 17826590 -11178066 - NTS_DM Other Other -39 201 38 1 721 870 9 0 27 chrUextra 17826590 17826702 -11177954 - NTS_DM Other Other -107 133 25 1 721 22 56 0 0 chrUextra 17826728 17826764 -11177892 + AT_rich Low_complexity Low_complexity 1 36 0 1 721 255 125 0 0 chrUextra 17826777 17826817 -11177839 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 721 246 150 0 0 chrUextra 17826953 17826993 -11177663 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 721 2458 24 0 0 chrUextra 17827968 17828259 -11176397 + MAX_I LTR Pao 3367 3657 -4257 1 721 3422 7 0 0 chrUextra 17828257 17828664 -11175992 - DM176_I LTR Gypsy -2587 3833 3427 1 721 5663 3 20 0 chrUextra 17828764 17829460 -11175196 + MDG1_I LTR Gypsy 985 1694 -4902 1 721 5937 1 1 1 chrUextra 17829561 17830256 -11174400 - LSU-rRNA_Dme rRNA rRNA -2587 1313 619 1 721 2993 170 10 12 chrUextra 17830356 17831034 -11173622 + SAR_DM Satellite Satellite 400 1076 -396 1 721 28 48 0 0 chrUextra 17831197 17831239 -11173417 + AT_rich Low_complexity Low_complexity 1 42 0 1 721 406 0 37 0 chrUextra 17831458 17831512 -11173144 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 721 2052 8 0 0 chrUextra 17831609 17831848 -11172808 + SSU-rRNA_Dme rRNA rRNA 1 239 -1756 1 721 5843 3 1 6 chrUextra 17831950 17832644 -11172012 - LSU-rRNA_Dme rRNA rRNA -2442 1458 768 1 721 3247 171 16 9 chrUextra 17832749 17833423 -11171233 - SAR_DM Satellite Satellite -425 1047 369 1 721 5854 22 0 0 chrUextra 17833540 17834236 -11170420 - STALKER4_I LTR Gypsy -2606 3924 3229 1 721 6178 3 0 0 chrUextra 17834336 17835032 -11169624 + ROO_I LTR Pao 5591 6286 -1970 1 721 1802 166 19 9 chrUextra 17835135 17835828 -11168828 - SAR_DM Satellite Satellite -549 700 1 1 721 259 125 0 0 chrUextra 17836531 17836571 -11168085 - HMSBEAGLE_I LTR Gypsy -6315 214 175 1 721 356 265 114 96 chrUextra 17837073 17837353 -11167303 - Invader1_LTR LTR Gypsy -55 368 84 1 721 3010 175 8 8 chrUextra 17837523 17838145 -11166511 + SAR_DM Satellite Satellite 293 914 -558 1 721 593 27 0 0 chrUextra 17838142 17838216 -11166440 - ARS406_DM Unknown Unknown -195 158 85 1 721 613 323 0 0 chrUextra 17838728 17838941 -11165715 - MICROPIA_I LTR Gypsy -622 3854 3662 1 721 688 176 115 33 chrUextra 17839118 17839300 -11165356 - TIRANT_LTR LTR Gypsy -220 197 1 1 721 1026 25 16 0 chrUextra 17839605 17839727 -11164929 - Baggins1 LINE LOA -15 5438 5315 1 721 633 62 0 0 chrUextra 17839723 17839804 -11164852 - Baggins1 LINE LOA -456 4997 4917 1 721 5295 42 19 4 chrUextra 17839908 17840604 -11164052 - MDG1_I LTR Gypsy -1152 5444 4739 1 721 6256 1 1 3 chrUextra 17840704 17841400 -11163256 - SSU-rRNA_Dme rRNA rRNA -389 1606 912 1 721 950 80 8 21 chrUextra 17841500 17842196 -11162460 - RSP Satellite Satellite -79 687 1 1 721 2383 177 13 6 chrUextra 17842299 17842992 -11161664 + SAR_DM Satellite Satellite 1 697 -677 1 721 6337 1 0 1 chrUextra 17843092 17843788 -11160868 + LSU-rRNA_Dme rRNA rRNA 2799 3493 -407 1 721 6173 1 0 0 chrUextra 17843888 17844584 -11160072 - ROO_I LTR Pao -5115 3141 2446 1 721 6057 22 0 0 chrUextra 17844684 17845380 -11159276 + R1_DM LINE R1 1788 2483 -2873 1 721 1250 299 27 20 chrUextra 17845625 17846174 -11158482 + Copia_I LTR Copia 156 708 -3885 1 721 2524 0 4 0 chrUextra 17846276 17846553 -11158103 - ROO_LTR LTR Pao -150 278 1 1 721 3303 22 0 2 chrUextra 17846553 17846972 -11157684 - ROO_I LTR Pao 0 8256 7839 1 721 674 47 0 0 chrUextra 17847072 17847157 -11157499 + DOC5_DM LINE Jockey 1099 1183 -3499 1 721 1356 44 205 0 chrUextra 17847160 17847365 -11157291 + DOC5_DM LINE Jockey 1303 1549 -3133 1 721 2776 58 10 13 chrUextra 17847371 17847754 -11156902 - DM297_I LTR Gypsy -798 5369 4988 1 721 2936 3 6 3 chrUextra 17847868 17848205 -11156451 + LSU-rRNA_Dme rRNA rRNA 1451 1788 -2112 1 721 2906 0 0 0 chrUextra 17848249 17848564 -11156092 + LSU-rRNA_Dme rRNA rRNA 1788 2102 -1798 1 721 6201 9 0 0 chrUextra 17848664 17849360 -11155296 + R1_DM LINE R1 2471 3166 -2190 1 721 6015 7 1 0 chrUextra 17849460 17850156 -11154500 + QUASIMODO_I LTR Gypsy 1535 2231 -3829 1 721 4090 4 0 0 chrUextra 17850256 17850707 -11153949 + LSU-rRNA_Dme rRNA rRNA 2206 2656 -1244 1 721 2225 4 0 0 chrUextra 17850704 17850952 -11153704 + R1_DM LINE R1 3231 3478 -1878 1 721 6095 0 0 3 chrUextra 17851052 17851748 -11152908 - ROO_I LTR Pao -1756 6500 5807 1 721 573 62 38 0 chrUextra 17851848 17851928 -11152728 - DMCR1A LINE CR1 -29 4441 4359 1 721 790 116 0 0 chrUextra 17851900 17852012 -11152644 - BATUMI_I LTR Pao -2460 5503 5392 1 721 4339 32 35 6 chrUextra 17852008 17852544 -11152112 - BATUMI_I LTR Pao -2850 5113 4562 1 721 5986 17 1 3 chrUextra 17852644 17853340 -11151316 - DM1731_I LTR Copia -2898 1078 384 1 721 3053 181 27 6 chrUextra 17853459 17854128 -11150528 - SAR_DM Satellite Satellite -441 1031 349 1 721 6236 1 1 0 chrUextra 17854236 17854932 -11149724 - R1_DM LINE R1 -2276 3080 2384 1 721 463 13 39 0 chrUextra 17855828 17855905 -11148751 + G2_DM LINE Jockey 3020 3099 -3 1 721 4941 2 0 0 chrUextra 17855986 17856524 -11148132 + SSU-rRNA_Dme rRNA rRNA 1 538 -1457 1 721 266 192 0 19 chrUextra 17856625 17856678 -11147978 + LSU-rRNA_Dme rRNA rRNA 2569 2620 -1280 1 721 269 125 0 0 chrUextra 17856721 17856761 -11147895 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 721 22 56 0 0 chrUextra 17856774 17856810 -11147846 + AT_rich Low_complexity Low_complexity 1 36 0 1 721 907 9 0 27 chrUextra 17856836 17856948 -11147708 + NTS_DM Other Other 25 133 -107 1 721 1304 18 0 6 chrUextra 17856948 17857113 -11147543 + NTS_DM Other Other 38 201 -39 1 721 907 9 0 27 chrUextra 17857165 17857277 -11147379 + NTS_DM Other Other 25 133 -107 1 721 369 23 0 0 chrUextra 17857277 17857320 -11147336 + NTS_DM Other Other 38 80 -160 1 721 1304 18 0 6 chrUextra 17857437 17857602 -11147054 + NTS_DM Other Other 38 201 -39 1 721 907 9 0 27 chrUextra 17857654 17857766 -11146890 + NTS_DM Other Other 25 133 -107 1 721 1304 18 0 6 chrUextra 17857766 17857931 -11146725 + NTS_DM Other Other 38 201 -39 1 721 21 57 0 0 chrUextra 17857931 17857966 -11146690 + AT_rich Low_complexity Low_complexity 1 35 0 1 721 870 9 9 27 chrUextra 17857992 17858103 -11146553 + NTS_DM Other Other 25 133 -107 1 721 300 186 81 25 chrUextra 17858574 17858734 -11145922 + (TATATG)n Simple_repeat Simple_repeat 6 174 0 1 721 25 119 0 0 chrUextra 17858734 17858885 -11145771 + AT_rich Low_complexity Low_complexity 1 151 0 1 721 933 82 8 21 chrUextra 17859012 17859708 -11144948 + RSP Satellite Satellite 1 687 0 1 721 1984 194 32 68 chrUextra 17859875 17860504 -11144152 + TAHRE LINE telomeric 6945 7550 -2913 1 721 4469 75 8 4 chrUextra 17860604 17861300 -11143356 + G2_DM LINE Jockey 4 514 -2588 1 721 5717 25 14 1 chrUextra 17861400 17862094 -11142562 + STALKER4_I LTR Gypsy 2051 2753 -3777 1 721 6124 0 0 1 chrUextra 17862196 17862892 -11141764 - LSU-rRNA_Dme rRNA rRNA -2853 1047 353 1 721 563 15 0 42 chrUextra 17862992 17863063 -11141593 - NTS_DM Other Other -148 92 25 1 721 1304 18 0 6 chrUextra 17863115 17863280 -11141376 - NTS_DM Other Other -39 201 38 1 721 877 9 0 35 chrUextra 17863280 17863393 -11141263 - NTS_DM Other Other -107 133 25 1 721 1287 24 0 6 chrUextra 17863445 17863610 -11141046 - NTS_DM Other Other -39 201 38 1 721 630 13 0 0 chrUextra 17863610 17863688 -11140968 - NTS_DM Other Other -107 133 56 1 721 1562 121 57 3 chrUextra 17864177 17864459 -11140197 + DNAREP1_DM LINE Penelope 1 297 -297 1 721 6252 4 0 0 chrUextra 17864584 17865280 -11139376 - Invader3_I LTR Gypsy -880 4008 3313 1 721 5713 48 1 1 chrUextra 17865380 17866076 -11138580 - R1_DM LINE R1 -3621 1735 1040 1 721 5052 32 0 71 chrUextra 17866176 17866853 -11137803 + R1_DM LINE R1 1333 1961 -3395 1 721 3260 265 38 30 chrUextra 17866974 17868464 -11136192 + SAR_DM Satellite Satellite 1 1501 -354 1 721 4090 42 8 13 chrUextra 17868584 17869118 -11135538 + BATUMI_I LTR Pao 6471 7001 -962 1 721 1751 238 25 36 chrUextra 17868587 17869260 -11135396 - MAX_I LTR Pao -703 7211 6305 1 721 6056 19 4 0 chrUextra 17869360 17870056 -11134600 + Copia2_I LTR Copia 2039 2737 -1425 1 721 34 24 0 0 chrUextra 17870547 17870588 -11134068 + AT_rich Low_complexity Low_complexity 1 41 0 1 721 794 0 0 0 chrUextra 17870952 17871041 -11133615 - NTS_DM Other Other -114 126 38 1 721 907 9 0 27 chrUextra 17871041 17871153 -11133503 - NTS_DM Other Other -107 133 25 1 721 22 56 0 0 chrUextra 17871179 17871215 -11133441 + AT_rich Low_complexity Low_complexity 1 36 0 1 721 269 125 0 0 chrUextra 17871228 17871268 -11133388 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 721 262 150 0 0 chrUextra 17871311 17871351 -11133305 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 721 236 175 0 0 chrUextra 17871403 17871443 -11133213 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 721 236 175 0 0 chrUextra 17871495 17871535 -11133121 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 721 22 56 0 0 chrUextra 17871540 17871576 -11133080 + AT_rich Low_complexity Low_complexity 1 36 0 1 721 6094 7 4 4 chrUextra 17871748 17872444 -11132212 - DIVER2_I LTR Pao -3219 928 233 1 721 798 62 149 88 chrUextra 17872544 17872750 -11131906 + FB4_DM DNA Tc1 3847 4053 -36 1 721 38 61 0 0 chrUextra 17873129 17873195 -11131461 + AT_rich Low_complexity Low_complexity 1 66 0 1 721 3599 197 1 0 chrUextra 17873340 17874034 -11130622 - ROVER-I_DM LTR Gypsy -2744 3840 3146 1 721 26 30 0 0 chrUextra 17874433 17874466 -11130190 + AT_rich Low_complexity Low_complexity 1 33 0 1 721 23 68 0 0 chrUextra 17874512 17874556 -11130100 + AT_rich Low_complexity Low_complexity 1 44 0 1 721 4964 11 2 2 chrUextra 17874932 17875505 -11129151 + R1_DM LINE R1 3514 4086 -1270 1 721 1077 24 0 0 chrUextra 17875503 17875628 -11129028 + R1_DM LINE R1 4559 4683 -673 1 721 5411 0 2 2 chrUextra 17875728 17876323 -11128333 + SSU-rRNA_Dme rRNA rRNA 1401 1995 0 1 721 291 50 25 0 chrUextra 17876524 17876564 -11128092 + ARS406_DM Unknown Unknown 149 189 -164 1 721 3152 166 11 8 chrUextra 17876532 17877183 -11127473 - SAR_DM Satellite Satellite -625 847 195 1 721 847 100 0 0 chrUextra 17877090 17877220 -11127436 + ARS406_DM Unknown Unknown 1 130 -223 1 721 3050 187 9 14 chrUextra 17877320 17878016 -11126640 + SAR_DM Satellite Satellite 224 915 -557 1 721 1728 0 5 0 chrUextra 17878117 17878308 -11126348 - LSU-rRNA_Dme rRNA rRNA -1921 1979 1788 1 721 3952 2 4 9 chrUextra 17878352 17878812 -11125844 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1331 1 721 697 286 42 82 chrUextra 17878914 17879461 -11125195 - Gypsy12_LTR LTR Gypsy -1294 1042 409 1 721 1485 40 1 9 chrUextra 17879708 17880404 -11124252 + (AATAG)n Simple_repeat Simple_repeat 1 690 0 1 721 819 0 0 0 chrUextra 17881109 17881200 -11123456 + (CACAA)n Simple_repeat Simple_repeat 5 95 0 1 721 2863 174 29 29 chrUextra 17881303 17881994 -11122662 - SAR_DM Satellite Satellite -357 1115 425 1 721 562 205 0 39 chrUextra 17882219 17882346 -11122310 + STALKER4_I LTR Gypsy 3692 3813 -2717 1 721 234 149 43 0 chrUextra 17882337 17882384 -11122272 + TABOR_I LTR Gypsy 3604 3652 -2684 1 721 966 160 32 0 chrUextra 17882404 17882591 -11122065 + I_DM LINE I 2127 2319 -3912 1 721 1434 74 69 0 chrUextra 17882590 17882792 -11121864 - DNAREP1_DM LINE Penelope -7 587 372 1 721 5929 19 19 0 chrUextra 17882892 17883588 -11121068 + ACCORD2_I LTR Gypsy 271 979 -6233 1 721 2551 77 270 21 chrUextra 17883688 17884249 -11120407 + MDG1_I LTR Gypsy 5908 6799 -98 1 721 357 86 0 0 chrUextra 17884253 17884311 -11120345 + (TAA)n Simple_repeat Simple_repeat 3 60 0 1 721 299 143 314 0 chrUextra 17884313 17884383 -11120273 + MDG1_LTR LTR Gypsy 89 180 -262 1 721 335 317 5 37 chrUextra 17884530 17884720 -11119936 + TABOR_I LTR Gypsy 1356 1539 -4797 1 721 5438 29 1 1 chrUextra 17885280 17885975 -11118681 + ACCORD2_I LTR Gypsy 6386 7080 -132 1 721 212 54 0 51 chrUextra 17887258 17887297 -11117359 + (TTTTTA)n Simple_repeat Simple_repeat 2 38 0 1 721 5235 26 91 0 chrUextra 17887668 17888364 -11116292 - R1_DM LINE R1 -370 4986 4228 1 721 1466 0 25 15 chrUextra 17888464 17888662 -11115994 + NTS_DM Other Other 41 240 0 1 721 1861 0 17 13 chrUextra 17888662 17888901 -11115755 + NTS_DM Other Other 1 240 0 1 721 1825 8 17 13 chrUextra 17888901 17889140 -11115516 + NTS_DM Other Other 1 240 0 1 721 2635 126 128 8 chrUextra 17889260 17889956 -11114700 - TART_B1 LINE telomeric -9317 1337 804 1 721 4005 16 0 2 chrUextra 17890056 17890571 -11114085 + ROO_I LTR Pao 7743 8256 0 1 721 1565 0 0 0 chrUextra 17890571 17890752 -11113904 + ROO_LTR LTR Pao 1 181 -247 1 721 3811 76 64 28 chrUextra 17890852 17891544 -11113112 - STALKER4_I LTR Gypsy -5133 1397 681 1 721 4076 61 64 22 chrUextra 17891656 17892326 -11112330 + PROTOP DNA P 48 745 -3735 1 721 4297 2 2 0 chrUextra 17892444 17892941 -11111715 + QUASIMODO_LTR LTR Gypsy 161 658 0 1 721 1567 25 10 0 chrUextra 17892941 17893139 -11111517 + QUASIMODO_I LTR Gypsy 1 200 -5860 1 721 5279 51 1 10 chrUextra 17893240 17893936 -11110720 + R1_DM LINE R1 1039 1728 -3628 1 721 2259 103 13 41 chrUextra 17894037 17894503 -11110153 - DMSAT6 Satellite Satellite -13 457 5 1 721 1091 111 20 0 chrUextra 17894533 17894732 -11109924 - DMSAT6 Satellite Satellite -37 433 231 1 721 3198 158 12 9 chrUextra 17894840 17895528 -11109128 - SAR_DM Satellite Satellite -396 1076 387 1 721 5678 19 6 3 chrUextra 17895628 17896324 -11108332 - R1_DM LINE R1 -1472 3884 3187 1 721 1486 321 2 2 chrUextra 17896483 17897120 -11107536 - Invader6_I LTR Gypsy -1910 2189 1553 1 721 5363 8 17 1 chrUextra 17897260 17897916 -11106740 + G_DM LINE Jockey 1 666 -3680 1 721 5030 52 33 0 chrUextra 17898016 17898712 -11105944 + TART LINE telomeric 2083 2801 -11676 1 721 5967 3 0 0 chrUextra 17898812 17899508 -11105148 - R1_DM LINE R1 -3107 2249 1554 1 721 5516 40 0 0 chrUextra 17899608 17900304 -11104352 - DIVER_I LTR Pao -1549 4094 3399 1 721 1370 147 19 4 chrUextra 17900404 17900664 -11103992 + MICROPIA_I LTR Gypsy 4213 4476 0 1 721 601 97 23 171 chrUextra 17900685 17900860 -11103796 + MICROPIA_LTR LTR Gypsy 156 304 -172 1 721 844 223 36 5 chrUextra 17900863 17901084 -11103572 + MICROPIA_LTR LTR Gypsy 248 475 -1 1 721 726 88 0 0 chrUextra 17901200 17901314 -11103342 - ARS406_DM Unknown Unknown -227 126 13 1 721 2692 187 26 8 chrUextra 17901233 17901896 -11102760 + SAR_DM Satellite Satellite 195 869 -603 1 721 377 189 9 19 chrUextra 17901996 17902104 -11102552 + XDMR_DM Unknown Unknown 254 360 0 1 721 2680 181 13 22 chrUextra 17902018 17902691 -11101965 - SAR_DM Satellite Satellite -354 1118 452 1 721 2829 186 22 10 chrUextra 17902792 17903482 -11101174 + SAR_DM Satellite Satellite 261 958 -514 1 721 5990 1 0 0 chrUextra 17903588 17904284 -11100372 - LSU-rRNA_Dme rRNA rRNA -2641 1259 564 1 721 47 19 0 0 chrUextra 17904384 17904438 -11100218 + AT_rich Low_complexity Low_complexity 1 54 0 1 721 2514 57 6 0 chrUextra 17904730 17905062 -11099594 - DMRT1A LINE R1 -13 5170 4837 1 721 494 17 0 0 chrUextra 17905180 17905238 -11099418 - NTS_DM Other Other -182 58 1 1 721 1756 17 17 17 chrUextra 17905238 17905478 -11099178 - NTS_DM Other Other 0 240 1 1 721 1744 21 17 17 chrUextra 17905478 17905718 -11098938 - NTS_DM Other Other 0 240 1 1 721 1175 0 0 0 chrUextra 17905742 17905876 -11098780 - LSU-rRNA_Dme rRNA rRNA -1309 2591 2458 1 721 5297 30 20 6 chrUextra 17905976 17906658 -11097998 + FW_DM LINE Jockey 4001 4692 0 1 721 2574 196 7 19 chrUextra 17906772 17907468 -11097188 + SAR_DM Satellite Satellite 1 687 -354 1 721 34 24 0 0 chrUextra 17908191 17908232 -11096424 + AT_rich Low_complexity Low_complexity 1 41 0 1 721 5554 19 0 0 chrUextra 17908392 17909060 -11095596 + G2_DM LINE Jockey 4 671 -2431 1 721 1609 0 0 0 chrUextra 17909160 17909345 -11095311 - SSU-rRNA_Dme rRNA rRNA -1810 185 1 1 721 32 0 0 0 chrUextra 17909477 17909509 -11095147 + AT_rich Low_complexity Low_complexity 1 32 0 1 721 5160 53 16 4 chrUextra 17909958 17910652 -11094004 + IDEFIX_I LTR Gypsy 2176 2877 -2751 1 721 1323 43 0 0 chrUextra 17910752 17910982 -11093674 + (GAGAA)n Simple_repeat Simple_repeat 1 230 0 1 721 2508 49 24 37 chrUextra 17911548 17911928 -11092728 - DOC4_DM LINE Jockey -1979 812 438 1 721 1701 62 49 1 chrUextra 17911929 17912178 -11092478 - DOC4_DM LINE Jockey -4412 381 1 1 721 2784 177 10 22 chrUextra 17912344 17913025 -11091631 + SAR_DM Satellite Satellite 446 1118 -354 1 721 324 182 20 20 chrUextra 17912939 17913040 -11091616 - XDMR_DM Unknown Unknown 0 360 260 1 721 3921 4 0 0 chrUextra 17913140 17913641 -11091015 + QUASIMODO_I LTR Gypsy 5560 6060 0 1 721 1588 5 0 0 chrUextra 17913641 17913836 -11090820 + QUASIMODO_LTR LTR Gypsy 1 195 -463 1 721 5891 3 0 0 chrUextra 17913936 17914632 -11090024 + ROO_I LTR Pao 2629 3324 -4932 1 721 3015 3 0 0 chrUextra 17914732 17915078 -11089578 - SSU-rRNA_Dme rRNA rRNA -1649 346 1 1 721 32 0 0 0 chrUextra 17915210 17915242 -11089414 + AT_rich Low_complexity Low_complexity 1 32 0 1 721 5973 3 0 1 chrUextra 17915528 17916224 -11088432 - R1_DM LINE R1 -221 5135 4441 1 721 750 94 23 0 chrUextra 17916324 17916452 -11088204 - ARS406_DM Unknown Unknown -222 131 1 1 721 2809 184 9 6 chrUextra 17916360 17917016 -11087640 + SAR_DM Satellite Satellite 195 852 -620 1 721 246 150 0 0 chrUextra 17917186 17917226 -11087430 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 721 246 150 0 0 chrUextra 17917278 17917318 -11087338 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 721 255 125 0 0 chrUextra 17917361 17917401 -11087255 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 721 22 56 0 0 chrUextra 17917414 17917450 -11087206 + AT_rich Low_complexity Low_complexity 1 36 0 1 721 870 9 0 27 chrUextra 17917476 17917588 -11087068 + NTS_DM Other Other 25 133 -107 1 721 1252 18 0 6 chrUextra 17917588 17917753 -11086903 + NTS_DM Other Other 38 201 -39 1 721 2621 177 34 31 chrUextra 17917918 17918612 -11086044 + SAR_DM Satellite Satellite 1 696 -365 1 721 3199 160 10 15 chrUextra 17918713 17919397 -11085259 - SAR_DM Satellite Satellite -439 1033 353 1 721 636 113 0 0 chrUextra 17919508 17919614 -11085042 - ARS406_DM Unknown Unknown -247 106 1 1 721 3109 155 7 19 chrUextra 17919521 17920197 -11084459 + SAR_DM Satellite Satellite 195 862 -610 1 721 435 37 0 0 chrUextra 17920150 17920204 -11084452 - ARS406_DM Unknown Unknown -164 189 136 1 721 5698 27 0 0 chrUextra 17920304 17920999 -11083657 + R1_DM LINE R1 2327 3021 -2335 1 721 1056 267 5 53 chrUextra 17921109 17921540 -11083116 - ROVER-I_DM LTR Gypsy -5407 1177 768 1 721 220 252 26 26 chrUextra 17921559 17921673 -11082983 + (TTTAG)n Simple_repeat Simple_repeat 3 116 0 1 721 276 114 0 0 chrUextra 17921894 17921938 -11082718 + G5_DM LINE Jockey 4324 4367 -489 1 721 1797 44 12 8 chrUextra 17921935 17922189 -11082467 + G5_DM LINE Jockey 4602 4856 0 1 721 1527 107 4 4 chrUextra 17922188 17922432 -11082224 - BS2 LINE Jockey -4464 257 14 1 721 3069 172 9 13 chrUextra 17922695 17923384 -11081272 - SAR_DM Satellite Satellite -396 1076 391 1 721 5865 1 0 0 chrUextra 17924279 17924974 -11079682 - ROO_I LTR Pao -3107 5149 4455 1 721 790 47 0 0 chrUextra 17925074 17925181 -11079475 + ARS406_DM Unknown Unknown 79 185 -168 1 721 2025 195 76 37 chrUextra 17925088 17925769 -11078887 - SAR_DM Satellite Satellite -208 1264 557 1 721 2797 15 0 0 chrUextra 17925869 17926205 -11078451 + DM176_LTR LTR Gypsy 172 507 0 1 721 2833 11 0 31 chrUextra 17926205 17926564 -11078092 + DM176_I LTR Gypsy 1 348 -6072 1 721 4231 24 22 4 chrUextra 17926664 17927215 -11077441 - BATUMI_I LTR Pao -7402 561 1 1 721 1110 14 0 28 chrUextra 17927215 17927359 -11077297 - BATUMI_LTR LTR Pao 0 272 133 1 721 1586 25 0 5 chrUextra 17927459 17927658 -11076998 + QUASIMODO_LTR LTR Gypsy 461 658 0 1 721 5704 4 22 13 chrUextra 17928254 17928949 -11075707 + DOC LINE Jockey 134 834 -3891 1 721 2077 30 4 4 chrUextra 17929049 17929318 -11075338 + CIRCE LINE Composite 4712 4980 -1376 1 721 1744 47 4 8 chrUextra 17929508 17929744 -11074912 - R1_DM LINE R1 -4037 1319 1085 1 721 1437 27 0 4 chrUextra 17929844 17930105 -11074551 + (GAGAA)n Simple_repeat Simple_repeat 1 259 0 1 721 5776 25 0 0 chrUextra 17931434 17932129 -11072527 + R1_DM LINE R1 4171 4865 -491 1 721 420 20 0 0 chrUextra 17932229 17932278 -11072378 + (CAATA)n Simple_repeat Simple_repeat 3 51 0 1 721 5673 7 1 0 chrUextra 17933025 17933719 -11070937 + DM297_I LTR Gypsy 4505 5199 -968 1 721 2802 181 28 20 chrUextra 17933822 17934514 -11070142 - SAR_DM Satellite Satellite -361 1111 415 1 721 2615 58 65 3 chrUextra 17934614 17935309 -11069347 - PROTOP_A DNA P -105 1000 397 1 721 2898 63 5 17 chrUextra 17936338 17936744 -11067912 - Baggins1 LINE LOA -262 5191 4791 1 721 5802 16 1 1 chrUextra 17936999 17937694 -11066962 + HETA LINE telomeric 1574 2268 -3813 1 721 3111 166 12 7 chrUextra 17937807 17938487 -11066169 + SAR_DM Satellite Satellite 326 1008 -464 1 721 4154 2 0 0 chrUextra 17938589 17939065 -11065591 - LSU-rRNA_Dme rRNA rRNA -1637 2263 1788 1 721 1391 6 11 6 chrUextra 17939109 17939284 -11065372 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1613 1 721 2720 188 29 19 chrUextra 17940179 17940874 -11063782 + SAR_DM Satellite Satellite 256 957 -515 1 721 2568 207 14 22 chrUextra 17940974 17941668 -11062988 + SAR_DM Satellite Satellite 1 688 -216 1 721 5698 1 4 6 chrUextra 17941769 17942451 -11062205 + LSU-rRNA_Dme rRNA rRNA 1108 1788 -2112 1 721 5984 3 0 0 chrUextra 17942564 17943259 -11061397 - ROO_I LTR Pao -2433 5823 5129 1 721 5034 16 119 1 chrUextra 17943359 17944054 -11060602 + DOC2_DM LINE Jockey 3740 4516 -277 1 721 6403 3 0 0 chrUextra 17944157 17944849 -11059807 - ROO_I LTR Pao -5367 2889 2198 1 721 642 0 0 0 chrUextra 17945570 17945644 -11059012 - ALUII_DM Unknown Unknown 0 240 167 1 721 2543 4 0 0 chrUextra 17945744 17946021 -11058635 + Invader4_LTR LTR Gypsy 70 346 0 1 721 3890 2 0 0 chrUextra 17946021 17946439 -11058217 + Invader4_I LTR Gypsy 1 418 -1995 1 721 4282 2 0 6 chrUextra 17946539 17947008 -11057648 - SSU-rRNA_Dme rRNA rRNA -1529 466 1 1 721 32 0 0 0 chrUextra 17947140 17947172 -11057484 + AT_rich Low_complexity Low_complexity 1 32 0 1 721 338 0 88 53 chrUextra 17947334 17947391 -11057265 + NTS_DM Other Other 182 240 0 1 721 2006 0 17 13 chrUextra 17947391 17947630 -11057026 + NTS_DM Other Other 1 240 0 1 721 1992 4 17 13 chrUextra 17947630 17947869 -11056787 + NTS_DM Other Other 1 240 0 1 721 1388 13 0 0 chrUextra 17947869 17948026 -11056630 + NTS_DM Other Other 1 157 -83 1 721 2027 183 6 9 chrUextra 17948136 17948823 -11055833 + SAR_DM Satellite Satellite 1 685 -674 1 721 1040 153 5 29 chrUextra 17948931 17949140 -11055516 - TART LINE telomeric -10726 3751 3548 1 721 1335 6 90 0 chrUextra 17949138 17949294 -11055362 - PROTOP_A DNA P -935 170 1 1 721 4096 5 0 0 chrUextra 17949965 17950414 -11054242 - G2_DM LINE Jockey -9 3093 2645 1 721 21 36 0 0 chrUextra 17950827 17950855 -11053801 + AT_rich Low_complexity Low_complexity 1 28 0 1 721 411 95 0 0 chrUextra 17951146 17951209 -11053447 - DMRT1B LINE R1 -3 5180 5118 1 721 6072 25 1 0 chrUextra 17951309 17952004 -11052652 - R1_DM LINE R1 -85 5271 4576 1 721 5393 37 1 22 chrUextra 17952104 17952799 -11051857 - R1_DM LINE R1 -4187 1169 489 1 721 6423 3 6 0 chrUextra 17952899 17953594 -11051062 + Gypsy6_I LTR Gypsy 4415 5113 -1899 1 721 6375 7 1 0 chrUextra 17953694 17954389 -11050267 + Invader1_I LTR Gypsy 1827 2522 -664 1 721 6477 3 0 0 chrUextra 17954489 17955184 -11049472 - SSU-rRNA_Dme rRNA rRNA -1029 966 272 1 721 5806 29 0 1 chrUextra 17955284 17955967 -11048689 + MAX_I LTR Pao 6693 7374 -540 1 721 5960 13 0 1 chrUextra 17956079 17956774 -11047882 + QUASIMODO_I LTR Gypsy 4488 5181 -879 1 722 6341 7 0 0 chrUextra 17956874 17957569 -11047087 - DOC LINE Jockey -221 4504 3810 1 722 445 238 44 6 chrUextra 17957670 17957802 -11046854 - Invader4_I LTR Gypsy -995 1418 1315 1 722 275 279 0 0 chrUextra 17957881 17957949 -11046707 - Invader4_I LTR Gypsy -1111 1302 1235 1 722 24 32 0 0 chrUextra 17957955 17957986 -11046670 + AT_rich Low_complexity Low_complexity 1 31 0 1 722 5708 48 7 1 chrUextra 17958464 17959159 -11045497 - R1_DM LINE R1 -3654 1702 1004 1 722 1132 8 0 0 chrUextra 17959259 17959384 -11045272 - 5S_DM RNA RNA -10 125 1 1 722 1226 15 0 0 chrUextra 17959622 17959757 -11044899 - 5S_DM RNA RNA 0 135 1 1 722 5961 4 35 0 chrUextra 17960054 17960749 -11043907 + Invader2_I LTR Gypsy 3745 4463 -129 1 722 3186 175 11 9 chrUextra 17960850 17961518 -11043138 - SAR_DM Satellite Satellite -612 860 192 1 722 814 107 0 0 chrUextra 17961422 17961544 -11043112 + ARS406_DM Unknown Unknown 1 122 -231 1 722 6051 20 1 1 chrUextra 17961644 17962339 -11042317 - R1_DM LINE R1 -1260 4096 3402 1 722 21 0 0 0 chrUextra 17963030 17963051 -11041605 + AT_rich Low_complexity Low_complexity 1 21 0 1 722 21 0 0 0 chrUextra 17963072 17963093 -11041563 + AT_rich Low_complexity Low_complexity 1 21 0 1 722 367 141 31 0 chrUextra 17963234 17963298 -11041358 - Gypsy12_I LTR Gypsy -5258 288 223 1 722 265 214 28 46 chrUextra 17963273 17963381 -11041275 - Gypsy12_I LTR Gypsy -595 1685 1580 1 722 1387 185 158 21 chrUextra 17963384 17963765 -11040891 - Gypsy12_LTR LTR Gypsy -746 1590 1158 1 722 34 24 0 0 chrUextra 17964291 17964332 -11040324 + AT_rich Low_complexity Low_complexity 1 41 0 1 722 2472 101 20 56 chrUextra 17964825 17965519 -11039137 - DMSAT6 Satellite Satellite 0 669 1 1 722 6159 9 1 1 chrUextra 17965619 17966314 -11038342 + R1_DM LINE R1 3496 4190 -1166 1 722 6132 3 13 1 chrUextra 17966414 17967109 -11037547 + STALKER4_I LTR Gypsy 3055 3757 -2773 1 722 6108 1 1 1 chrUextra 17967209 17967904 -11036752 - R1_DM LINE R1 -4064 1292 598 1 722 6342 0 0 4 chrUextra 17968004 17968699 -11035957 - LSU-rRNA_Dme rRNA rRNA -2681 1219 528 1 722 1431 29 6 0 chrUextra 17968799 17968969 -11035687 - NINJA_I LTR Pao -372 5639 5469 1 722 4594 21 0 4 chrUextra 17968969 17969494 -11035162 + PROTOP_A DNA P 1 523 -582 1 722 3480 5 0 0 chrUextra 17969597 17969976 -11034680 - ROO_I LTR Pao -7877 379 1 1 722 2906 3 3 0 chrUextra 17969976 17970289 -11034367 - ROO_LTR LTR Pao 0 428 115 1 722 6036 11 43 1 chrUextra 17970389 17971084 -11033572 - DOC2_DM LINE Jockey -37 4756 4033 1 722 6324 6 1 0 chrUextra 17971184 17971879 -11032777 + FW_DM LINE Jockey 3082 3777 -915 1 722 3129 177 9 18 chrUextra 17971981 17972647 -11032009 + SAR_DM Satellite Satellite 452 1111 -361 1 722 387 196 10 19 chrUextra 17972570 17972674 -11031982 - XDMR_DM Unknown Unknown 0 360 258 1 722 2497 186 95 29 chrUextra 17972778 17973430 -11031226 - SAR_DM Satellite Satellite -216 1256 562 1 722 504 81 0 13 chrUextra 17973394 17973469 -11031187 + ARS406_DM Unknown Unknown 95 168 -185 1 722 6377 1 1 3 chrUextra 17974365 17975059 -11029597 + SSU-rRNA_Dme rRNA rRNA 752 1444 -551 1 722 5773 28 4 11 chrUextra 17975159 17975854 -11028802 - BATUMI_I LTR Pao -5571 2392 1703 1 722 3178 186 12 9 chrUextra 17975957 17976646 -11028010 - SAR_DM Satellite Satellite -615 857 167 1 722 2683 10 0 0 chrUextra 17976749 17977041 -11027615 + LSU-rRNA_Dme rRNA rRNA 2365 2656 -1244 1 722 3684 2 0 0 chrUextra 17977038 17977444 -11027212 + R1_DM LINE R1 3231 3636 -1720 1 722 5985 22 30 0 chrUextra 17977544 17978239 -11026417 + FW_DM LINE Jockey 304 1019 -3673 1 722 2400 28 11 0 chrUextra 17978339 17978623 -11026033 + R1_DM LINE R1 3391 3677 -1679 1 722 3630 15 0 0 chrUextra 17978625 17979034 -11025622 + R1_DM LINE R1 4026 4434 -922 1 722 4890 36 0 3 chrUextra 17979134 17979726 -11024930 + PROTOP_A DNA P 516 1105 0 1 722 1488 58 0 3 chrUextra 17979929 17980300 -11024356 + (CTTAT)n Simple_repeat Simple_repeat 1 369 0 1 722 1488 19 0 5 chrUextra 17980314 17980527 -11024129 + (AGCTG)n Simple_repeat Simple_repeat 1 211 0 1 722 332 22 0 22 chrUextra 17980578 17980624 -11024032 + (CGAGA)n Simple_repeat Simple_repeat 2 46 0 1 722 27 73 0 0 chrUextra 17981239 17981294 -11023362 + AT_rich Low_complexity Low_complexity 1 55 0 1 722 26 30 0 0 chrUextra 17981334 17981367 -11023289 + AT_rich Low_complexity Low_complexity 1 33 0 1 722 6311 6 0 0 chrUextra 17981519 17982214 -11022442 - R1_DM LINE R1 -2890 2466 1772 1 722 3288 158 22 37 chrUextra 17982314 17983009 -11021647 - SAR_DM Satellite Satellite -446 1026 343 1 722 699 13 0 0 chrUextra 17983109 17983185 -11021471 - NTS_DM Other Other -164 76 1 1 722 1496 20 20 25 chrUextra 17983185 17983389 -11021267 - NTS_DM Other Other 0 240 38 1 722 876 0 0 0 chrUextra 17983389 17983485 -11021171 - NTS_DM Other Other -107 133 38 1 722 888 28 9 0 chrUextra 17983485 17983592 -11021064 - NTS_DM Other Other -107 133 26 1 722 21 57 0 0 chrUextra 17983623 17983658 -11020998 + AT_rich Low_complexity Low_complexity 1 35 0 1 722 1127 21 0 7 chrUextra 17983658 17983804 -11020852 - NTS_DM Other Other -39 201 57 1 722 32 0 0 0 chrUextra 17983975 17984007 -11020649 + AT_rich Low_complexity Low_complexity 1 32 0 1 722 4277 2 0 2 chrUextra 17984139 17984599 -11020057 + SSU-rRNA_Dme rRNA rRNA 1 459 -1536 1 722 6311 0 1 0 chrUextra 17984700 17985376 -11019280 + SSU-rRNA_Dme rRNA rRNA 1319 1995 0 1 722 676 152 13 0 chrUextra 17985613 17985764 -11018892 + (AATAG)n Simple_repeat Simple_repeat 2 154 0 1 722 1986 4 17 17 chrUextra 17986313 17986553 -11018103 + NTS_DM Other Other 1 240 0 1 722 1401 6 0 18 chrUextra 17986553 17986718 -11017938 + NTS_DM Other Other 1 162 -78 1 722 534 119 36 0 chrUextra 17986828 17986912 -11017744 + NTS_DM Other Other 4 90 -150 1 722 4637 95 2 2 chrUextra 17987084 17987779 -11016877 - BATUMI_I LTR Pao -3362 4552 3782 1 722 28 48 0 0 chrUextra 17988048 17988090 -11016566 + AT_rich Low_complexity Low_complexity 1 42 0 1 722 32 0 0 0 chrUextra 17988418 17988450 -11016206 + AT_rich Low_complexity Low_complexity 1 32 0 1 722 6349 7 1 1 chrUextra 17988674 17989369 -11015287 - SSU-rRNA_Dme rRNA rRNA -743 1252 558 1 722 278 103 0 0 chrUextra 17989469 17989508 -11015148 + LSU-rRNA_Dme rRNA rRNA 2582 2620 -1280 1 722 22 56 0 0 chrUextra 17989521 17989557 -11015099 + AT_rich Low_complexity Low_complexity 1 36 0 1 722 936 9 0 27 chrUextra 17989583 17989695 -11014961 + NTS_DM Other Other 25 133 -107 1 722 1350 18 0 6 chrUextra 17989695 17989860 -11014796 + NTS_DM Other Other 38 201 -39 1 722 906 9 0 35 chrUextra 17989912 17990025 -11014631 + NTS_DM Other Other 25 133 -107 1 722 1116 22 0 7 chrUextra 17990025 17990164 -11014492 + NTS_DM Other Other 38 175 -65 1 722 442 305 46 75 chrUextra 17990265 17990959 -11013697 + DM176_I LTR Gypsy 1560 2229 -4355 1 722 6302 1 0 1 chrUextra 17991059 17991754 -11012902 - R1_DM LINE R1 -3123 2233 1540 1 722 4876 26 0 52 chrUextra 17991864 17992477 -11012179 - CIRCE LINE Composite -4471 1885 1305 1 722 1878 21 17 17 chrUextra 17992673 17992913 -11011743 + NTS_DM Other Other 1 240 0 1 722 1899 17 17 17 chrUextra 17992913 17993153 -11011503 + NTS_DM Other Other 1 240 0 1 722 1610 21 0 5 chrUextra 17993153 17993344 -11011312 + NTS_DM Other Other 1 190 -50 1 722 6382 0 0 1 chrUextra 17993444 17994139 -11010517 + ROO_I LTR Pao 1884 2577 -5679 1 722 2931 87 5 20 chrUextra 17994239 17994638 -11010018 - Gypsy12_I LTR Gypsy -497 5049 4657 1 722 1154 21 107 0 chrUextra 17994636 17994776 -11009880 - PROTOP_B DNA P -998 155 1 1 722 2887 3 0 3 chrUextra 17995034 17995351 -11009305 + STALKER4_LTR LTR Gypsy 87 402 0 1 722 354 25 0 0 chrUextra 17995351 17995378 -11009278 + STALKER4_I LTR Gypsy 1 27 -6503 1 722 309 96 0 37 chrUextra 17995378 17995432 -11009224 + Stalker2_I LTR Gypsy 1 52 -7350 1 722 481 200 142 0 chrUextra 17995607 17995727 -11008929 + Stalker2_I LTR Gypsy 242 378 -7024 1 722 853 97 226 0 chrUextra 17996015 17996170 -11008486 + Rehavkus-1_DY DNA Tc1 2 191 -5424 1 722 670 93 41 0 chrUextra 17996163 17996260 -11008396 - Baggins1 LINE LOA -626 4827 4727 1 722 24 0 0 0 chrUextra 17996499 17996523 -11008133 + AT_rich Low_complexity Low_complexity 1 24 0 1 722 3311 166 14 19 chrUextra 17996624 17997319 -11007337 - SAR_DM Satellite Satellite -525 947 256 1 722 3392 168 16 9 chrUextra 17997440 17998114 -11006542 + SAR_DM Satellite Satellite 326 1004 -468 1 722 5996 9 0 1 chrUextra 17998214 17998909 -11005747 + DM297_I LTR Gypsy 4334 5027 -1140 1 722 6150 16 1 3 chrUextra 17999009 17999703 -11004953 - LSU-rRNA_Dme rRNA rRNA -2348 1552 860 1 722 416 86 0 0 chrUextra 17999942 18000000 -11004656 + Rehavkus-1_DY DNA Tc1 216 273 -5342 1 722 321 42 0 40 chrUextra 18000012 18000062 -11004594 + FB4_DM DNA Tc1 80 127 -3962 1 722 502 0 64 0 chrUextra 18000337 18000415 -11004241 + (TA)n Simple_repeat Simple_repeat 2 84 0 1 722 5002 30 10 37 chrUextra 18000599 18001294 -11003362 - DOC2_DM LINE Jockey -3838 955 280 1 722 785 116 0 15 chrUextra 18001394 18001525 -11003131 - TART LINE telomeric -7243 7234 7106 1 722 874 146 6 30 chrUextra 18001527 18001696 -11002960 - TART LINE telomeric -7328 7149 6985 1 722 418 80 77 39 chrUextra 18001686 18001764 -11002892 - TART LINE telomeric -3805 10672 10592 1 722 1258 126 269 6 chrUextra 18001754 18002089 -11002567 - TAHRE LINE telomeric -4 10459 10037 1 722 5521 30 0 0 chrUextra 18002189 18002884 -11001772 + MDG1_I LTR Gypsy 1957 2651 -3945 1 722 5873 3 0 0 chrUextra 18002984 18003679 -11000977 + Copia_I LTR Copia 1824 2518 -2075 1 722 2018 8 0 0 chrUextra 18003779 18004013 -11000643 - Invader4_I LTR Gypsy -2179 234 1 1 722 3022 3 0 0 chrUextra 18004013 18004359 -11000297 - Invader4_LTR LTR Gypsy 0 346 1 1 722 898 0 9 0 chrUextra 18004359 18004468 -11000188 - Invader4_I LTR Gypsy 0 2413 2304 1 722 3081 175 10 7 chrUextra 18004574 18005269 -10999387 - SAR_DM Satellite Satellite -435 1037 341 1 722 5853 1 1 7 chrUextra 18005369 18006064 -10998592 - LSU-rRNA_Dme rRNA rRNA -2391 1509 819 1 722 374 186 10 19 chrUextra 18006169 18006273 -10998383 + XDMR_DM Unknown Unknown 258 360 0 1 722 2681 185 7 21 chrUextra 18006187 18006859 -10997797 - SAR_DM Satellite Satellite -353 1119 457 1 722 5933 6 0 0 chrUextra 18006959 18007654 -10997002 - DOC LINE Jockey -1567 3158 2464 1 722 2668 168 9 10 chrUextra 18007754 18008332 -10996324 + SAR_DM Satellite Satellite 418 994 -478 1 722 861 50 0 0 chrUextra 18008330 18008449 -10996207 - ARS406_DM Unknown Unknown -171 182 64 1 722 2483 90 20 4 chrUextra 18008549 18009242 -10995414 + DMSAT6 Satellite Satellite 1 703 -152 1 722 5666 19 6 0 chrUextra 18009344 18010039 -10994617 - ROO_I LTR Pao -5865 2391 1693 1 722 5940 13 0 0 chrUextra 18010139 18010834 -10993822 + LSU-rRNA_Dme rRNA rRNA 1840 2534 -1366 1 722 5689 11 6 1 chrUextra 18010934 18011629 -10993027 - PROTOP DNA P -1949 2531 1834 1 722 5706 10 6 0 chrUextra 18011729 18012424 -10992232 + ROO_I LTR Pao 2742 3440 -4816 1 722 3063 172 10 7 chrUextra 18012530 18013210 -10991446 - SAR_DM Satellite Satellite -593 879 198 1 722 37 39 0 0 chrUextra 18013348 18013399 -10991257 + AT_rich Low_complexity Low_complexity 1 51 0 1 722 28 48 0 0 chrUextra 18013754 18013796 -10990860 + AT_rich Low_complexity Low_complexity 1 42 0 1 722 5300 21 89 6 chrUextra 18014114 18014809 -10989847 + FW_DM LINE Jockey 3683 4435 -257 1 722 6062 1 0 0 chrUextra 18014909 18015604 -10989052 - ROO_I LTR Pao -559 7697 7003 1 722 5937 3 0 3 chrUextra 18015704 18016399 -10988257 - R1_DM LINE R1 -435 4921 4229 1 722 1224 0 0 0 chrUextra 18016499 18016635 -10988021 + (GAGAA)n Simple_repeat Simple_repeat 4 139 0 1 722 2407 44 0 3 chrUextra 18018091 18018408 -10986248 + G2_DM LINE Jockey 2567 2882 -220 1 722 489 110 0 0 chrUextra 18018409 18018509 -10986147 + G2_DM LINE Jockey 3000 3099 -3 1 722 561 199 0 0 chrUextra 18018540 18018706 -10985950 + (CTATT)n Simple_repeat Simple_repeat 4 169 0 1 722 326 192 14 0 chrUextra 18018706 18018779 -10985877 + (TTATG)n Simple_repeat Simple_repeat 3 76 0 1 722 3166 156 14 14 chrUextra 18018884 18019576 -10985080 - SAR_DM Satellite Satellite -435 1037 346 1 722 5108 45 19 11 chrUextra 18020474 18021169 -10983487 - BATUMI_I LTR Pao -4196 3767 3068 1 722 2736 195 12 25 chrUextra 18021269 18021964 -10982692 + SAR_DM Satellite Satellite 1 686 -219 1 722 1648 18 18 18 chrUextra 18022064 18022293 -10982363 + NTS_DM Other Other 12 240 0 1 722 1824 8 17 13 chrUextra 18022293 18022532 -10982124 + NTS_DM Other Other 1 240 0 1 722 1692 5 18 14 chrUextra 18022532 18022752 -10981904 + NTS_DM Other Other 1 221 -19 1 722 1856 35 58 4 chrUextra 18022859 18023116 -10981540 + ROO_I LTR Pao 5620 5890 -2366 1 722 5821 0 1 1 chrUextra 18023681 18024349 -10980307 - LSU-rRNA_Dme rRNA rRNA 0 3900 3233 1 722 5983 0 0 0 chrUextra 18024449 18025144 -10979512 + FW_DM LINE Jockey 1423 2117 -2575 1 722 3054 174 12 7 chrUextra 18025261 18025939 -10978717 + SAR_DM Satellite Satellite 326 1006 -466 1 722 6013 1 3 1 chrUextra 18026039 18026734 -10977922 - SSU-rRNA_Dme rRNA rRNA -803 1192 497 1 722 2709 182 18 11 chrUextra 18027629 18028291 -10976365 - SAR_DM Satellite Satellite -614 858 192 1 722 777 101 0 8 chrUextra 18028194 18028324 -10976332 + ARS406_DM Unknown Unknown 1 129 -224 1 722 2408 4 0 0 chrUextra 18028424 18028701 -10975955 - LSU-rRNA_Dme rRNA rRNA -984 2916 2640 1 722 2728 9 0 0 chrUextra 18028699 18029017 -10975639 - R1_DM LINE R1 0 5356 5039 1 722 753 11 11 0 chrUextra 18029027 18029118 -10975538 - R1_DM LINE R1 0 5356 5265 1 722 1373 199 72 80 chrUextra 18029219 18029914 -10974742 - TAHRE LINE telomeric -2966 7497 6944 1 722 25 0 0 0 chrUextra 18030014 18030039 -10974617 + AT_rich Low_complexity Low_complexity 1 25 0 1 722 32 0 0 0 chrUextra 18030368 18030400 -10974256 + AT_rich Low_complexity Low_complexity 1 32 0 1 722 1542 0 0 0 chrUextra 18030532 18030709 -10973947 + SSU-rRNA_Dme rRNA rRNA 1 177 -1818 1 722 2367 21 111 65 chrUextra 18030809 18031160 -10973496 - Gypsy3_LTR LTR Gypsy -31 367 1 1 722 3010 3 0 0 chrUextra 18031160 18031504 -10973152 - Gypsy3_I LTR Gypsy 0 6177 5834 1 722 5817 20 0 0 chrUextra 18031604 18032299 -10972357 - R1_DM LINE R1 -590 4766 4072 1 722 5912 0 0 3 chrUextra 18032399 18033094 -10971562 - LSU-rRNA_Dme rRNA rRNA -2682 1218 526 1 722 6021 3 0 0 chrUextra 18033194 18033889 -10970767 + FW_DM LINE Jockey 3683 4377 -315 1 722 6023 4 0 0 chrUextra 18033989 18034683 -10969973 + R2_DM LINE R2 2320 3013 -594 1 722 6121 1 0 0 chrUextra 18034784 18035479 -10969177 + R2_DM LINE R2 1285 1979 -1628 1 722 2739 189 16 22 chrUextra 18035582 18036274 -10968382 + SAR_DM Satellite Satellite 1 688 -208 1 722 3101 182 7 6 chrUextra 18036378 18037069 -10967587 - SAR_DM Satellite Satellite -526 946 255 1 722 6072 1 1 0 chrUextra 18037169 18037864 -10966792 - LSU-rRNA_Dme rRNA rRNA -394 3506 2811 1 722 6036 4 0 0 chrUextra 18037964 18038659 -10965997 + SSU-rRNA_Dme rRNA rRNA 449 1143 -852 1 722 4898 73 4 3 chrUextra 18038759 18039450 -10965206 - S_DM DNA Tc1 -458 1278 587 1 722 4779 33 82 4 chrUextra 18039554 18040247 -10964409 - DMRT1B LINE R1 -3243 1940 1194 1 722 5962 3 1 0 chrUextra 18040349 18041044 -10963612 + Invader3_I LTR Gypsy 2551 3246 -1642 1 722 4062 18 24 0 chrUextra 18041168 18041661 -10962995 - CIRCE LINE Composite -5851 505 1 1 722 1414 45 0 0 chrUextra 18041661 18041839 -10962817 - CIRCE LINE Composite 0 6356 6179 1 722 669 115 0 0 chrUextra 18041939 18042052 -10962604 - ARS406_DM Unknown Unknown -240 113 1 1 722 2785 183 22 10 chrUextra 18041959 18042634 -10962022 + SAR_DM Satellite Satellite 195 877 -595 1 722 1252 18 0 6 chrUextra 18042750 18042915 -10961741 + NTS_DM Other Other 38 201 -39 1 722 21 57 0 0 chrUextra 18042915 18042950 -10961706 + AT_rich Low_complexity Low_complexity 1 35 0 1 722 870 9 0 27 chrUextra 18042976 18043088 -10961568 + NTS_DM Other Other 25 133 -107 1 722 1252 18 0 6 chrUextra 18043088 18043253 -10961403 + NTS_DM Other Other 38 201 -39 1 722 21 57 0 0 chrUextra 18043253 18043288 -10961368 + AT_rich Low_complexity Low_complexity 1 35 0 1 722 802 9 9 36 chrUextra 18043314 18043426 -10961230 + NTS_DM Other Other 25 133 -107 1 722 5149 45 30 9 chrUextra 18043529 18044224 -10960432 - CIRCE LINE Composite -3688 2668 1959 1 722 6058 1 1 0 chrUextra 18044326 18045019 -10959637 - LSU-rRNA_Dme rRNA rRNA 0 3900 3207 1 722 5433 35 9 1 chrUextra 18045119 18045814 -10958842 - R1_DM LINE R1 -2240 3116 2417 1 722 3853 35 43 21 chrUextra 18045914 18046446 -10958210 - CIRCE LINE Composite -3925 2431 1888 1 722 417 344 22 33 chrUextra 18046152 18046513 -10958143 - Ulysses_I LTR Gypsy -1504 4877 4521 1 722 565 72 12 0 chrUextra 18046526 18046609 -10958047 - CIRCE LINE Composite -4474 1882 1799 1 722 5227 3 5 6 chrUextra 18046772 18047404 -10957252 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1158 1 722 2832 159 53 4 chrUextra 18047504 18048199 -10956457 - TART_B1 LINE telomeric -8632 2022 1294 1 722 4041 0 4 0 chrUextra 18048299 18048763 -10955893 + SSU-rRNA_Dme rRNA rRNA 1530 1995 0 1 722 21 89 0 0 chrUextra 18048782 18048838 -10955818 + AT_rich Low_complexity Low_complexity 1 56 0 1 722 2838 169 15 25 chrUextra 18049109 18049789 -10954867 - SAR_DM Satellite Satellite -361 1111 439 1 722 2839 194 7 10 chrUextra 18049889 18050580 -10954076 + SAR_DM Satellite Satellite 207 895 -577 1 722 288 0 0 0 chrUextra 18050684 18050717 -10953939 - NTS_DM Other Other -207 33 1 1 722 1850 4 17 13 chrUextra 18050717 18050956 -10953700 - NTS_DM Other Other 0 240 1 1 722 1716 25 17 17 chrUextra 18050956 18051196 -10953460 - NTS_DM Other Other 0 240 1 1 722 1152 28 27 22 chrUextra 18051196 18051379 -10953277 - NTS_DM Other Other 0 240 57 1 722 5969 3 0 1 chrUextra 18051479 18052174 -10952482 + FW_DM LINE Jockey 3152 3845 -847 1 722 5748 6 0 7 chrUextra 18052274 18052969 -10951687 - STALKER4_I LTR Gypsy -973 5557 4868 1 722 1176 0 0 0 chrUextra 18053086 18053221 -10951435 + 5S_DM RNA RNA 1 135 0 1 722 1157 15 0 0 chrUextra 18053445 18053580 -10951076 + 5S_DM RNA RNA 1 135 0 1 722 32 0 0 0 chrUextra 18054044 18054076 -10950580 + AT_rich Low_complexity Low_complexity 1 32 0 1 722 3039 6 0 0 chrUextra 18054208 18054559 -10950097 + SSU-rRNA_Dme rRNA rRNA 1 351 -1644 1 722 2948 190 14 6 chrUextra 18054659 18055354 -10949302 + SAR_DM Satellite Satellite 302 1002 -470 1 722 230 281 11 11 chrUextra 18056004 18056094 -10948562 + BLASTOPIA_I LTR Gypsy 2646 2735 -1746 1 722 2358 164 9 9 chrUextra 18056249 18056944 -10947712 - SAR_DM Satellite Satellite -569 695 1 1 722 880 82 6 20 chrUextra 18057052 18057739 -10946917 - RSP Satellite Satellite 0 677 1 1 722 1306 203 39 3 chrUextra 18057839 18058533 -10946123 + SAR_DM Satellite Satellite 1 719 -524 1 722 320 161 10 147 chrUextra 18058774 18058876 -10945780 - DNAREP1_DM LINE Penelope -6 588 501 1 722 1085 50 12 6 chrUextra 18058880 18059042 -10945614 + S2_DM DNA Tc1 1 163 -1572 1 722 314 173 0 58 chrUextra 18059068 18059154 -10945502 - DNAREP1_DM LINE Penelope -26 568 488 1 722 5890 0 0 1 chrUextra 18059429 18060124 -10944532 - FW_DM LINE Jockey -1400 3292 2599 1 722 4945 53 40 0 chrUextra 18060224 18060917 -10943739 + R1_DM LINE R1 399 1119 -4237 1 722 5581 29 0 0 chrUextra 18061019 18061714 -10942942 + FW_DM LINE Jockey 2801 3495 -1197 1 722 21 57 0 0 chrUextra 18062439 18062474 -10942182 + AT_rich Low_complexity Low_complexity 1 35 0 1 722 5946 3 0 0 chrUextra 18062609 18063304 -10941352 + Invader3_I LTR Gypsy 3102 3796 -1092 1 722 257 0 30 0 chrUextra 18063404 18063437 -10941219 - NTS_DM Other Other -206 34 1 1 722 1861 0 17 13 chrUextra 18063437 18063676 -10940980 - NTS_DM Other Other 0 240 1 1 722 1843 4 17 13 chrUextra 18063676 18063915 -10940741 - NTS_DM Other Other 0 240 1 1 722 1328 0 22 16 chrUextra 18063915 18064098 -10940558 - NTS_DM Other Other 0 240 57 1 722 2390 194 19 19 chrUextra 18064199 18064815 -10939841 - SAR_DM Satellite Satellite -361 1111 496 1 722 569 28 0 0 chrUextra 18064820 18064892 -10939764 + ARS406_DM Unknown Unknown 90 161 -192 1 722 1629 18 14 22 chrUextra 18064992 18065215 -10939441 - NTS_DM Other Other -19 221 1 1 722 1756 17 17 17 chrUextra 18065215 18065455 -10939201 - NTS_DM Other Other 0 240 1 1 722 1665 18 17 17 chrUextra 18065455 18065686 -10938970 - NTS_DM Other Other 0 240 10 1 722 5689 22 1 1 chrUextra 18065786 18066480 -10938176 - R1_DM LINE R1 -1413 3943 3250 1 722 3556 2 0 2 chrUextra 18066580 18066996 -10937660 - LSU-rRNA_Dme rRNA rRNA -846 3054 2640 1 722 2412 4 4 0 chrUextra 18066994 18067274 -10937382 - R1_DM LINE R1 0 5356 5076 1 722 1620 6 0 0 chrUextra 18068168 18068511 -10936145 + (CAAGA)n Simple_repeat Simple_repeat 1 343 0 1 722 5472 4 4 1 chrUextra 18068962 18069656 -10935000 + ROVER-I_DM LTR Gypsy 5646 6341 -243 1 722 5741 11 1 1 chrUextra 18069756 18070449 -10934207 + R1_DM LINE R1 3524 4216 -1140 1 722 5039 36 10 28 chrUextra 18071360 18072037 -10932619 - BATUMI_I LTR Pao -5196 2767 2103 1 722 5969 1 1 3 chrUextra 18072138 18072832 -10931824 - SSU-rRNA_Dme rRNA rRNA -341 1654 962 1 722 5931 1 3 3 chrUextra 18072932 18073626 -10931030 + LSU-rRNA_Dme rRNA rRNA 935 1628 -2272 1 722 28 48 0 0 chrUextra 18073812 18073854 -10930802 + AT_rich Low_complexity Low_complexity 1 42 0 1 722 486 129 24 0 chrUextra 18074128 18074213 -10930443 - NTS_DM Other Other -150 90 4 1 722 636 21 0 31 chrUextra 18074323 18074420 -10930236 - NTS_DM Other Other -78 162 69 1 722 1616 18 18 18 chrUextra 18074520 18074746 -10929910 + NTS_DM Other Other 15 240 0 1 722 1831 8 17 13 chrUextra 18074746 18074985 -10929671 + NTS_DM Other Other 1 240 0 1 722 1773 0 18 13 chrUextra 18074985 18075214 -10929442 + NTS_DM Other Other 1 230 -10 1 722 3522 5 2 0 chrUextra 18075314 18075723 -10928933 - LSU-rRNA_Dme rRNA rRNA -913 2987 2578 1 722 2527 0 0 0 chrUextra 18075719 18076008 -10928648 - R2_DM LINE R2 -2 3605 3317 1 722 2517 202 10 23 chrUextra 18076108 18076792 -10927864 + SAR_DM Satellite Satellite 444 1118 -354 1 722 470 168 9 78 chrUextra 18076902 18077018 -10927638 - HETRP_DM Satellite Satellite -247 1625 1518 1 722 501 217 8 8 chrUextra 18077162 18077283 -10927373 - HETRP_DM Satellite Satellite -203 1669 1549 1 722 282 29 0 0 chrUextra 18077283 18077318 -10927338 + (TC)n Simple_repeat Simple_repeat 2 36 0 1 722 655 186 7 14 chrUextra 18077449 18077591 -10927065 - HETRP_DM Satellite Satellite -203 1669 1529 1 722 2961 177 12 13 chrUextra 18077696 18078372 -10926284 - SAR_DM Satellite Satellite -472 1000 326 1 722 540 200 110 39 chrUextra 18078528 18078823 -10925833 - Gypsy12_LTR LTR Gypsy -553 1727 1443 1 722 1154 164 95 20 chrUextra 18078801 18079184 -10925472 - Gypsy12_LTR LTR Gypsy -661 1675 1170 1 722 5678 9 3 1 chrUextra 18079284 18079978 -10924678 - STALKER4_I LTR Gypsy -4605 1925 1231 1 722 5656 30 0 3 chrUextra 18080079 18080772 -10923884 - MAX_I LTR Pao -674 7240 6550 1 722 1111 18 24 24 chrUextra 18080874 18081044 -10923612 + NTS_DM Other Other 71 240 0 1 722 1734 21 17 17 chrUextra 18081044 18081284 -10923372 + NTS_DM Other Other 1 240 0 1 722 1753 25 12 17 chrUextra 18081284 18081525 -10923131 + NTS_DM Other Other 1 240 0 1 722 343 24 0 0 chrUextra 18081525 18081566 -10923090 + NTS_DM Other Other 1 41 -199 1 722 5975 0 1 0 chrUextra 18081666 18082360 -10922296 + ROO_I LTR Pao 5230 5924 -2332 1 722 938 321 35 36 chrUextra 18082484 18083150 -10921506 + Copia2_I LTR Copia 1550 2214 -1948 1 722 2794 185 19 7 chrUextra 18084048 18084722 -10919934 - SAR_DM Satellite Satellite -596 876 195 1 722 522 123 65 9 chrUextra 18084635 18084742 -10919914 + ARS406_DM Unknown Unknown 1 113 -240 1 722 2055 38 70 42 chrUextra 18084844 18085200 -10919456 + PROTOP_B DNA P 571 936 -217 1 722 286 50 0 0 chrUextra 18085193 18085253 -10919403 + PROTOP_B DNA P 572 631 -522 1 722 1993 54 14 0 chrUextra 18085258 18085535 -10919121 + PROTOP_B DNA P 794 1074 -79 1 722 5478 29 0 13 chrUextra 18085636 18086330 -10918326 + FW_DM LINE Jockey 1252 1936 -2756 1 722 5599 20 0 6 chrUextra 18086430 18087124 -10917532 - FW_DM LINE Jockey -2478 2214 1525 1 722 2787 171 50 12 chrUextra 18087225 18087912 -10916744 - SAR_DM Satellite Satellite -514 958 246 1 722 251 130 0 0 chrUextra 18087872 18087918 -10916738 + ARS406_DM Unknown Unknown 1 46 -307 1 723 5725 16 0 0 chrUextra 18088018 18088712 -10915944 - NINJA_I LTR Pao -4797 1214 521 1 723 5946 6 1 0 chrUextra 18088812 18089506 -10915150 - R1_DM LINE R1 -576 4780 4086 1 723 3232 166 9 9 chrUextra 18089608 18090300 -10914356 - SAR_DM Satellite Satellite -435 1037 346 1 723 5996 3 0 0 chrUextra 18090400 18091094 -10913562 - FW_DM LINE Jockey -2302 2390 1697 1 723 2781 3 0 0 chrUextra 18091194 18091527 -10913129 + FW_DM LINE Jockey 4360 4692 0 1 723 1560 177 14 3 chrUextra 18091535 18091887 -10912769 + SAR_DM Satellite Satellite 507 862 -610 1 723 2973 174 11 23 chrUextra 18091989 18092682 -10911974 - SAR_DM Satellite Satellite -361 1111 427 1 723 767 0 0 0 chrUextra 18093576 18093669 -10910987 - NOMAD_LTR LTR Gypsy -425 93 1 1 723 2689 164 17 12 chrUextra 18093669 18094267 -10910389 - SAR_DM Satellite Satellite -626 846 246 1 723 2767 90 0 2 chrUextra 18094455 18094856 -10909800 + Jockey2 LINE Jockey 1421 1820 -1608 1 723 695 39 449 0 chrUextra 18094864 18095064 -10909592 - PROTOP_B DNA P -297 856 567 1 723 5550 32 6 0 chrUextra 18095164 18095858 -10908798 + R1_DM LINE R1 4208 4905 -451 1 723 4356 64 8 4 chrUextra 18096752 18097446 -10907210 + G2_DM LINE Jockey 4 513 -2589 1 723 3128 171 52 10 chrUextra 18097554 18098240 -10906416 - STALKER4_I LTR Gypsy -4752 1778 1064 1 723 3031 175 9 9 chrUextra 18098353 18099034 -10905622 + SAR_DM Satellite Satellite 324 1004 -468 1 723 2015 0 0 0 chrUextra 18099134 18099363 -10905293 + LSU-rRNA_Dme rRNA rRNA 2404 2632 -1268 1 723 3951 11 4 0 chrUextra 18099363 18099828 -10904828 + R1_DM LINE R1 1 467 -4889 1 723 5889 1 0 0 chrUextra 18099928 18100622 -10904034 - LSU-rRNA_Dme rRNA rRNA -2858 1042 349 1 723 710 11 11 0 chrUextra 18100722 18100809 -10903847 + (TATAA)n Simple_repeat Simple_repeat 4 91 0 1 723 4569 4 0 2 chrUextra 18100809 18101343 -10903313 - QUASIMODO_LTR LTR Gypsy -2 656 124 1 723 633 0 0 0 chrUextra 18101343 18101416 -10903240 - DM1731_I LTR Copia -3418 558 486 1 723 5788 9 0 0 chrUextra 18101516 18102210 -10902446 + STALKER4_I LTR Gypsy 2159 2852 -3678 1 723 5883 1 1 0 chrUextra 18102310 18103004 -10901652 + LSU-rRNA_Dme rRNA rRNA 419 1113 -2787 1 723 3171 10 0 2 chrUextra 18103104 18103504 -10901152 + TART_B1 LINE telomeric 10129 10527 -127 1 723 2544 10 0 0 chrUextra 18103503 18103798 -10900858 + TART_B1 LINE telomeric 3137 3431 -7223 1 723 2654 10 0 0 chrUextra 18104692 18104997 -10899659 - Invader1_I LTR Gypsy -2881 305 1 1 723 3286 15 3 0 chrUextra 18104997 18105386 -10899270 - Invader1_LTR LTR Gypsy 0 423 34 1 723 5572 33 4 0 chrUextra 18105486 18106180 -10898476 + R1_DM LINE R1 2728 3424 -1932 1 723 5690 20 0 0 chrUextra 18107074 18107768 -10896888 - FW_DM LINE Jockey -1534 3158 2465 1 723 5757 13 27 0 chrUextra 18107868 18108562 -10896094 + Gypsy4_I LTR Gypsy 3246 3958 -2330 1 723 2968 172 68 18 chrUextra 18108667 18109356 -10895300 + SAR_DM Satellite Satellite 1 723 -208 1 723 1826 41 4 4 chrUextra 18109456 18109699 -10894957 + R1_DM LINE R1 3297 3539 -1817 1 723 3645 15 2 9 chrUextra 18109689 18110150 -10894506 + R1_DM LINE R1 3767 4224 -1132 1 723 475 82 72 0 chrUextra 18110251 18110348 -10894308 + CT-rich Low_complexity Low_complexity 2 105 0 1 723 5325 30 43 3 chrUextra 18111045 18111738 -10892918 - DMCR1A LINE CR1 -798 3672 2952 1 723 645 100 9 9 chrUextra 18112632 18112743 -10891913 - ARS406_DM Unknown Unknown -242 111 1 1 723 3036 165 13 15 chrUextra 18112649 18113326 -10891330 + SAR_DM Satellite Satellite 195 870 -602 1 723 5926 6 0 0 chrUextra 18113426 18114120 -10890536 + DOC LINE Jockey 1663 2356 -2369 1 723 5870 4 0 1 chrUextra 18114220 18114914 -10889742 + DOC LINE Jockey 1204 1896 -2829 1 723 5025 5 0 0 chrUextra 18115014 18115598 -10889058 + R1_DM LINE R1 4773 5356 0 1 723 941 9 9 0 chrUextra 18115596 18115708 -10888948 + LSU-rRNA_Dme rRNA rRNA 2640 2752 -1148 1 723 5269 42 20 1 chrUextra 18115808 18116501 -10888155 - R1_DM LINE R1 -3950 1406 701 1 723 5609 19 0 0 chrUextra 18116602 18117296 -10887360 - MDG1_I LTR Gypsy -959 5637 4944 1 723 3075 143 22 33 chrUextra 18117423 18118090 -10886566 + SAR_DM Satellite Satellite 369 1028 -444 1 723 5694 13 1 0 chrUextra 18118190 18118884 -10885772 + PROTOP_A DNA P 363 1057 -48 1 723 4122 2 0 0 chrUextra 18118984 18119456 -10885200 - DOC LINE Jockey -4252 473 2 1 723 400 221 23 0 chrUextra 18119502 18119674 -10884982 + (AATAG)n Simple_repeat Simple_repeat 2 177 0 1 723 28 79 0 0 chrUextra 18120327 18120390 -10884266 + AT_rich Low_complexity Low_complexity 1 63 0 1 723 23 68 0 0 chrUextra 18120421 18120465 -10884191 + AT_rich Low_complexity Low_complexity 1 44 0 1 723 2224 112 16 34 chrUextra 18120574 18121247 -10883409 - DMSAT6 Satellite Satellite -2 661 1 1 723 264 250 0 0 chrUextra 18121405 18121461 -10883195 + Gypsy12A_LTR LTR Gypsy 409 464 -1816 1 723 654 269 41 84 chrUextra 18121570 18121988 -10882668 + Gypsy12_LTR LTR Gypsy 679 1078 -1258 1 723 922 168 102 15 chrUextra 18122382 18122587 -10882069 + DMLTR5 LTR Gypsy 44 266 0 1 723 351 85 661 14 chrUextra 18122586 18122718 -10881938 + HMSBEAGLE_I LTR Gypsy 1 221 -6308 1 723 6010 0 0 1 chrUextra 18122954 18123648 -10881008 + R2_DM LINE R2 571 1263 -2344 1 723 6032 1 1 0 chrUextra 18124542 18125236 -10879420 + DOC LINE Jockey 3262 3956 -769 1 723 550 331 24 51 chrUextra 18125582 18125954 -10878702 - GTWIN_I LTR Gypsy -2298 3562 3201 1 723 227 297 0 0 chrUextra 18126254 18126328 -10878328 + HMSBEAGLE_I LTR Gypsy 2873 2946 -3583 1 723 1231 254 6 3 chrUextra 18126480 18126824 -10877832 + HMSBEAGLE_I LTR Gypsy 3100 3444 -3085 1 723 2663 186 25 9 chrUextra 18126924 18127592 -10877064 + SAR_DM Satellite Satellite 279 957 -515 1 723 984 189 25 9 chrUextra 18127718 18128410 -10876246 + SAR_DM Satellite Satellite 1 703 -680 1 723 1026 0 0 0 chrUextra 18128512 18128626 -10876030 + (TCTTG)n Simple_repeat Simple_repeat 2 115 0 1 723 5994 1 0 3 chrUextra 18129306 18130000 -10874656 + LSU-rRNA_Dme rRNA rRNA 1822 2513 -1387 1 723 3533 0 0 0 chrUextra 18130393 18130794 -10873862 + ROO_LTR LTR Pao 1 401 -27 1 723 23 0 0 0 chrUextra 18131392 18131415 -10873241 + AT_rich Low_complexity Low_complexity 1 23 0 1 723 237 35 0 0 chrUextra 18131559 18131588 -10873068 + DIVER2_I LTR Pao 1366 1394 -2753 1 723 257 0 30 0 chrUextra 18131688 18131721 -10872935 - NTS_DM Other Other -206 34 1 1 723 1861 0 17 13 chrUextra 18131721 18131960 -10872696 - NTS_DM Other Other 0 240 1 1 723 1861 0 17 13 chrUextra 18131960 18132199 -10872457 - NTS_DM Other Other 0 240 1 1 723 1328 0 22 16 chrUextra 18132199 18132382 -10872274 - NTS_DM Other Other 0 240 57 1 723 34 24 0 0 chrUextra 18132729 18132770 -10871886 + AT_rich Low_complexity Low_complexity 1 41 0 1 723 5673 7 40 1 chrUextra 18133276 18133970 -10870686 + Invader4_I LTR Gypsy 786 1506 -907 1 723 3491 36 59 15 chrUextra 18134070 18134546 -10870110 - ROO_I LTR Pao -3567 4689 4193 1 723 1681 24 5 0 chrUextra 18134555 18134764 -10869892 + FW_DM LINE Jockey 1750 1959 -2733 1 723 5522 7 6 1 chrUextra 18134864 18135558 -10869098 - DM176_I LTR Gypsy -4776 1644 948 1 723 21 0 0 0 chrUextra 18135787 18135808 -10868848 + AT_rich Low_complexity Low_complexity 1 21 0 1 723 410 220 70 85 chrUextra 18135875 18136074 -10868582 - HMSBEAGLE_I LTR Gypsy -6110 419 224 1 723 5629 22 1 1 chrUextra 18136452 18137144 -10867512 + R1_DM LINE R1 3525 4216 -1140 1 723 5606 20 0 0 chrUextra 18137246 18137940 -10866716 - ROO_I LTR Pao -3082 5174 4481 1 723 1998 200 12 7 chrUextra 18138040 18138463 -10866193 - Gypsy_I LTR Gypsy -5631 876 452 1 723 1942 21 25 0 chrUextra 18138495 18138734 -10865922 - BS2 LINE Jockey -1105 3616 3372 1 723 2876 185 7 19 chrUextra 18138838 18139528 -10865128 - SAR_DM Satellite Satellite -361 1111 430 1 723 1314 51 6 8 chrUextra 18139628 18140139 -10864517 + (GAGAA)n Simple_repeat Simple_repeat 1 509 0 1 723 25 0 0 0 chrUextra 18140488 18140513 -10864143 + AT_rich Low_complexity Low_complexity 1 25 0 1 723 641 92 20 10 chrUextra 18140633 18140732 -10863924 - STALKER4_LTR LTR Gypsy -23 379 280 1 723 3039 21 0 29 chrUextra 18140732 18141116 -10863540 + CIRCE LINE Composite 1428 1800 -4556 1 723 5419 14 1 0 chrUextra 18142010 18142704 -10861952 + QUASIMODO_I LTR Gypsy 4826 5520 -540 1 723 1503 43 0 0 chrUextra 18142804 18142992 -10861664 + CIRCE LINE Composite 6169 6356 0 1 723 4062 18 24 0 chrUextra 18142992 18143485 -10861171 + CIRCE LINE Composite 1 505 -5851 1 723 5205 11 25 4 chrUextra 18143598 18144292 -10860364 + QUASIMODO_I LTR Gypsy 4770 5477 -583 1 723 513 37 0 12 chrUextra 18144392 18144474 -10860182 + NTS_DM Other Other 121 201 -39 1 723 870 9 0 27 chrUextra 18144526 18144638 -10860018 + NTS_DM Other Other 25 133 -107 1 723 1252 18 0 6 chrUextra 18144638 18144803 -10859853 + NTS_DM Other Other 38 201 -39 1 723 870 9 0 27 chrUextra 18144855 18144967 -10859689 + NTS_DM Other Other 25 133 -107 1 723 899 26 0 0 chrUextra 18144967 18145084 -10859572 + NTS_DM Other Other 38 154 -86 1 723 723 108 0 0 chrUextra 18145186 18145306 -10859350 - ARS406_DM Unknown Unknown -233 120 1 1 723 3028 171 8 8 chrUextra 18145213 18145880 -10858776 + SAR_DM Satellite Satellite 195 861 -611 1 723 2653 31 0 0 chrUextra 18145980 18146303 -10858353 + CIRCE LINE Composite 6034 6356 0 1 723 3139 16 0 0 chrUextra 18146303 18146674 -10857982 + CIRCE LINE Composite 1 371 -5985 1 723 2669 191 30 13 chrUextra 18146775 18147465 -10857191 - SAR_DM Satellite Satellite -478 994 293 1 723 5804 3 0 3 chrUextra 18147568 18148262 -10856394 + DMRT1B LINE R1 782 1473 -3710 1 723 553 14 0 0 chrUextra 18148362 18148433 -10856223 + Copia2_I LTR Copia 4092 4162 0 1 723 3608 2 7 0 chrUextra 18148465 18148885 -10855771 + Invader1_LTR LTR Gypsy 1 423 0 1 723 1410 6 6 0 chrUextra 18148885 18149054 -10855602 + Copia2_LTR_DM LTR Copia 29 198 0 1 723 2784 189 26 10 chrUextra 18149156 18149850 -10854806 + SAR_DM Satellite Satellite 279 983 -489 1 723 5625 20 0 1 chrUextra 18149950 18150644 -10854012 - BLOOD_I LTR Gypsy -3448 3165 2473 1 723 5909 7 0 0 chrUextra 18150746 18151438 -10853218 + DMRT1B LINE R1 1662 2353 -2830 1 723 47 0 0 0 chrUextra 18151706 18151753 -10852903 + AT_rich Low_complexity Low_complexity 1 47 0 1 723 3042 215 36 19 chrUextra 18152333 18153796 -10850860 + SAR_DM Satellite Satellite 1 1487 -443 1 723 388 194 9 18 chrUextra 18153710 18153820 -10850836 - XDMR_DM Unknown Unknown 0 360 252 1 723 1170 0 0 0 chrUextra 18153920 18154057 -10850599 - NTS_DM Other Other -103 137 1 1 723 1850 4 17 13 chrUextra 18154057 18154296 -10850360 - NTS_DM Other Other 0 240 1 1 723 1734 21 17 17 chrUextra 18154296 18154536 -10850120 - NTS_DM Other Other 0 240 1 1 723 485 13 51 39 chrUextra 18154536 18154614 -10850042 - NTS_DM Other Other 0 240 162 1 723 5945 10 1 0 chrUextra 18154714 18155408 -10849248 + LSU-rRNA_Dme rRNA rRNA 3149 3843 -57 1 723 5547 30 0 1 chrUextra 18155508 18156202 -10848454 - R1_DM LINE R1 -1767 3589 2897 1 723 2873 25 6 0 chrUextra 18156302 18156660 -10847996 - G2_DM LINE Jockey -24 3078 2719 1 723 24 67 0 0 chrUextra 18156754 18156799 -10847857 + AT_rich Low_complexity Low_complexity 1 45 0 1 723 5906 6 0 1 chrUextra 18157096 18157790 -10846866 + R1_DM LINE R1 4383 5075 -281 1 723 2964 181 9 8 chrUextra 18157890 18158560 -10846096 - SAR_DM Satellite Satellite -556 916 246 1 723 383 109 0 0 chrUextra 18158520 18158584 -10846072 + ARS406_DM Unknown Unknown 1 64 -289 1 723 5022 54 39 0 chrUextra 18158684 18159373 -10845283 - Baggins1 LINE LOA -4574 879 164 1 723 2242 90 6 51 chrUextra 18159478 18160170 -10844486 - DMSAT6 Satellite Satellite -67 660 1 1 723 364 0 0 21 chrUextra 18160272 18160320 -10844336 + R1_DM LINE R1 5310 5356 0 1 723 5673 1 0 0 chrUextra 18160318 18160966 -10843690 + LSU-rRNA_Dme rRNA rRNA 2640 3287 -613 1 723 5787 7 16 4 chrUextra 18161066 18161760 -10842896 - DM1731_I LTR Copia -1798 2178 1477 1 723 2923 185 13 7 chrUextra 18161864 18162541 -10842115 - SAR_DM Satellite Satellite -396 1076 396 1 723 2485 166 13 12 chrUextra 18162666 18163232 -10841424 + SAR_DM Satellite Satellite 1 683 -602 1 723 804 69 9 0 chrUextra 18163232 18163348 -10841308 - ARS406_DM Unknown Unknown -164 189 73 1 723 621 0 0 0 chrUextra 18164242 18164311 -10840345 + (AATAG)n Simple_repeat Simple_repeat 2 70 0 1 723 5625 17 1 4 chrUextra 18165036 18165730 -10838926 - R1_DM LINE R1 -1431 3925 3234 1 723 2408 198 36 28 chrUextra 18165832 18166524 -10838132 - SAR_DM Satellite Satellite -313 1159 462 1 723 1034 103 6 11 chrUextra 18166633 18166809 -10837847 + SAR_DM Satellite Satellite 729 903 -569 1 723 2199 176 6 10 chrUextra 18166824 18167318 -10837338 + SAR_DM Satellite Satellite 496 987 -485 1 723 27 29 0 0 chrUextra 18167625 18167659 -10836997 + AT_rich Low_complexity Low_complexity 1 34 0 1 723 5812 6 1 0 chrUextra 18169006 18169700 -10834956 + Gypsy4_I LTR Gypsy 4968 5662 -626 1 723 898 88 0 29 chrUextra 18169800 18169940 -10834716 - DIVER_LTR LTR Pao -88 136 1 1 723 4580 29 0 0 chrUextra 18169940 18170494 -10834162 - DIVER_I LTR Pao 0 5643 5090 1 723 4529 22 0 52 chrUextra 18170623 18171233 -10833423 + CIRCE LINE Composite 1305 1882 -4474 1 723 2202 176 22 78 chrUextra 18171391 18172082 -10832574 + TART_B1 LINE telomeric 1092 1743 -8911 1 723 5607 12 3 1 chrUextra 18172182 18172849 -10831807 - R1_DM LINE R1 -4687 669 2 1 723 5699 10 25 0 chrUextra 18172976 18173670 -10830986 + Gypsy4_I LTR Gypsy 4663 5373 -915 1 723 376 188 0 0 chrUextra 18173774 18173843 -10830813 + HETRP_DM Satellite Satellite 1601 1669 -203 1 723 733 176 26 20 chrUextra 18173988 18174139 -10830517 + HETRP_DM Satellite Satellite 1518 1669 -203 1 723 1363 130 111 10 chrUextra 18174151 18174439 -10830217 - HOBO DNA hAT 0 3016 2700 1 723 27 62 0 0 chrUextra 18174781 18174829 -10829827 + AT_rich Low_complexity Low_complexity 1 48 0 1 723 225 288 111 22 chrUextra 18174925 18175060 -10829596 + ACCORD2_I LTR Gypsy 526 672 -6540 1 723 3357 48 7 0 chrUextra 18175610 18176052 -10828604 + PROTOP DNA P 74 518 -3962 1 723 6001 1 1 0 chrUextra 18176946 18177640 -10827016 + DMRT1B LINE R1 3387 4081 -1102 1 723 2711 193 13 18 chrUextra 18177740 18178434 -10826222 + SAR_DM Satellite Satellite 1 690 -411 1 723 2656 233 56 12 chrUextra 18178534 18179079 -10825577 - SAR_DM Satellite Satellite -641 1549 954 1 723 411 127 0 0 chrUextra 18179079 18179150 -10825506 + ARS406_DM Unknown Unknown 1 71 -282 1 723 2656 233 56 12 chrUextra 18179150 18180018 -10824638 - SAR_DM Satellite Satellite -641 953 1 1 723 2842 182 26 9 chrUextra 18180124 18180816 -10823840 - SAR_DM Satellite Satellite -486 986 283 1 723 5614 36 0 0 chrUextra 18180916 18181610 -10823046 - R1_DM LINE R1 -1816 3540 2847 1 723 2498 200 13 6 chrUextra 18181712 18182239 -10822417 - HMSBEAGLE_I LTR Gypsy -3577 2952 2422 1 723 899 143 19 0 chrUextra 18182243 18182404 -10822252 - HMSBEAGLE_I LTR Gypsy -4075 2454 2291 1 723 1815 188 5 10 chrUextra 18182506 18182560 -10822096 - SAR_DM Satellite Satellite -416 624 554 1 723 1031 89 0 0 chrUextra 18182560 18182718 -10821938 + ARS406_DM Unknown Unknown 1 158 -195 1 723 1815 188 5 10 chrUextra 18182718 18183134 -10821522 - SAR_DM Satellite Satellite -416 553 1 1 723 455 34 0 0 chrUextra 18183139 18183198 -10821458 + ARS406_DM Unknown Unknown 90 148 -205 1 723 2164 110 29 39 chrUextra 18183298 18183992 -10820664 + DMSAT6 Satellite Satellite 1 686 -92 1 723 577 232 40 35 chrUextra 18184098 18184326 -10820330 + Gypsy12_LTR LTR Gypsy 921 1149 -1187 1 723 1549 181 89 19 chrUextra 18184347 18184786 -10819870 + Gypsy12_LTR LTR Gypsy 1643 2150 -186 1 723 5708 9 1 0 chrUextra 18184886 18185580 -10819076 + DM297_I LTR Gypsy 3227 3921 -2246 1 723 5469 0 0 38 chrUextra 18185680 18186374 -10818282 + LSU-rRNA_Dme rRNA rRNA 183 850 -3050 1 723 3020 184 9 9 chrUextra 18186474 18187166 -10817490 - SAR_DM Satellite Satellite -435 1037 346 1 723 2957 179 12 9 chrUextra 18187278 18187961 -10816695 + SAR_DM Satellite Satellite 195 879 -593 1 723 444 240 19 32 chrUextra 18188070 18188225 -10816431 - QUASIMODO_I LTR Gypsy -381 5679 5527 1 723 2237 54 33 6 chrUextra 18188217 18188551 -10816105 + PROTOP_B DNA P 176 518 -635 1 723 448 50 707 0 chrUextra 18188527 18188713 -10815943 + PROTOP DNA P 541 859 -3621 1 723 278 29 0 0 chrUextra 18188721 18188756 -10815900 - Jockey2 LINE Jockey -1608 1820 1786 1 723 2970 179 12 10 chrUextra 18188856 18189546 -10815110 - SAR_DM Satellite Satellite -515 957 267 1 723 3187 166 10 9 chrUextra 18189650 18190337 -10814319 + SAR_DM Satellite Satellite 369 1056 -416 1 723 610 0 0 0 chrUextra 18190444 18190513 -10814143 + LSU-rRNA_Dme rRNA rRNA 2570 2638 -1262 1 723 4508 0 0 0 chrUextra 18190510 18191027 -10813629 + R1_DM LINE R1 4840 5356 0 1 723 982 9 0 0 chrUextra 18191025 18191138 -10813518 + LSU-rRNA_Dme rRNA rRNA 2640 2752 -1148 1 723 4669 93 32 1 chrUextra 18191240 18191932 -10812724 - Gypsy12_I LTR Gypsy -1780 3766 3054 1 723 770 138 20 7 chrUextra 18192032 18192178 -10812478 + DNAREP1_DM LINE Penelope 89 236 -358 1 723 211 114 0 43 chrUextra 18192229 18192275 -10812381 + (TAA)n Simple_repeat Simple_repeat 2 45 0 1 723 5994 9 0 0 chrUextra 18192826 18193520 -10811136 + Copia2_I LTR Copia 3166 3859 -303 1 723 6039 1 1 1 chrUextra 18193620 18194314 -10810342 + LSU-rRNA_Dme rRNA rRNA 2854 3547 -353 1 723 447 35 0 0 chrUextra 18194414 18194471 -10810185 + (TTCTC)n Simple_repeat Simple_repeat 5 61 0 1 723 1407 6 0 0 chrUextra 18194479 18194639 -10810017 + (GAGAA)n Simple_repeat Simple_repeat 1 160 0 1 723 6055 4 0 0 chrUextra 18195208 18195902 -10808754 + Copia2_I LTR Copia 2954 3647 -515 1 723 296 0 0 0 chrUextra 18196796 18196832 -10807824 - LSU-rRNA_Dme rRNA rRNA -3864 36 1 1 723 21 95 0 0 chrUextra 18196844 18196907 -10807749 + AT_rich Low_complexity Low_complexity 1 63 0 1 723 34 24 0 0 chrUextra 18197122 18197163 -10807493 + AT_rich Low_complexity Low_complexity 1 41 0 1 723 2446 3 7 7 chrUextra 18197194 18197489 -10807167 - SSU-rRNA_Dme rRNA rRNA -626 1369 1075 1 723 3066 159 12 31 chrUextra 18198382 18199061 -10805595 - SAR_DM Satellite Satellite -436 1036 371 1 723 2151 93 0 46 chrUextra 18199182 18199531 -10805125 - CIRCE LINE Composite -2365 3991 3659 1 723 2765 24 0 0 chrUextra 18199531 18199867 -10804789 + STALKER4_LTR LTR Gypsy 1 336 -66 1 723 5613 7 0 6 chrUextra 18199968 18200657 -10803999 - STALKER4_I LTR Gypsy -4763 1767 1083 1 723 5792 11 1 0 chrUextra 18200761 18201454 -10803202 + DOC2_DM LINE Jockey 2750 3443 -1350 1 723 1127 310 51 12 chrUextra 18201555 18202224 -10802432 - TOM_I LTR Gypsy -2043 4069 3375 1 723 4374 1 98 0 chrUextra 18202347 18203040 -10801616 - FW_DM LINE Jockey -1046 3646 2886 1 723 5829 16 0 1 chrUextra 18203140 18203833 -10800823 + FW_DM LINE Jockey 3559 4250 -442 1 723 2286 181 12 25 chrUextra 18203939 18204501 -10800155 - SAR_DM Satellite Satellite -382 1090 536 1 723 1013 16 0 0 chrUextra 18204504 18204626 -10800030 + Gypsy6_LTR LTR Gypsy 1 122 -285 1 723 943 9 0 0 chrUextra 18204726 18204838 -10799818 + 5S_DM RNA RNA 24 135 0 1 723 1176 0 0 0 chrUextra 18205062 18205197 -10799459 + 5S_DM RNA RNA 1 135 0 1 723 5934 7 0 0 chrUextra 18205519 18206212 -10798444 - R1_DM LINE R1 -639 4717 4025 1 723 511 123 187 8 chrUextra 18207108 18207231 -10797425 - MDG1_LTR LTR Gypsy -250 192 48 1 723 1566 11 0 0 chrUextra 18207231 18207411 -10797245 + (TTA)n Simple_repeat Simple_repeat 1 180 0 1 723 341 30 0 130 chrUextra 18207428 18207505 -10797151 - MDG1_I LTR Gypsy 0 6596 6530 1 723 455 99 52 22 chrUextra 18207533 18207667 -10796989 - MDG1_I LTR Gypsy -64 6532 6395 1 723 893 58 7 0 chrUextra 18207660 18207798 -10796858 - MDG1_I LTR Gypsy -392 6204 6066 1 723 488 119 36 0 chrUextra 18208090 18208174 -10796482 - NTS_DM Other Other -150 90 4 1 723 1301 6 0 18 chrUextra 18208286 18208451 -10796205 - NTS_DM Other Other -78 162 1 1 723 942 7 29 21 chrUextra 18208451 18208591 -10796065 - NTS_DM Other Other 0 240 100 1 723 2320 163 11 9 chrUextra 18208691 18209384 -10795272 - SAR_DM Satellite Satellite -489 694 1 1 723 659 144 0 8 chrUextra 18209484 18209603 -10795053 - DM176_I LTR Gypsy -563 5857 5740 1 723 2082 217 9 10 chrUextra 18209600 18210177 -10794479 - DM297_I LTR Gypsy -1433 4734 4159 1 723 244 128 0 21 chrUextra 18210657 18210705 -10793951 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 723 351 49 65 16 chrUextra 18210727 18210789 -10793867 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 723 692 186 0 14 chrUextra 18210788 18210935 -10793721 - DMLTR5 LTR Gypsy 0 266 122 1 723 4974 42 55 3 chrUextra 18211070 18211763 -10792893 - ROO_I LTR Pao -3188 5068 4340 1 723 21 89 0 0 chrUextra 18212149 18212205 -10792451 + AT_rich Low_complexity Low_complexity 1 56 0 1 723 2770 18 0 3 chrUextra 18212219 18212556 -10792100 + PROTOP_A DNA P 744 1079 -26 1 723 5866 1 3 4 chrUextra 18212656 18213349 -10791307 + LSU-rRNA_Dme rRNA rRNA 781 1472 -2428 1 723 25 0 0 0 chrUextra 18213499 18213524 -10791132 + AT_rich Low_complexity Low_complexity 1 25 0 1 723 2134 174 54 34 chrUextra 18213548 18214102 -10790554 + Stalker2_I LTR Gypsy 291 855 -6547 1 723 283 202 29 39 chrUextra 18214242 18214345 -10790311 + XDMR_DM Unknown Unknown 259 360 0 1 723 2687 189 9 22 chrUextra 18214259 18214935 -10789721 - SAR_DM Satellite Satellite -354 1118 452 1 723 5534 33 1 0 chrUextra 18215035 18215728 -10788928 - MDG1_I LTR Gypsy -2446 4150 3457 1 723 956 183 27 16 chrUextra 18215828 18216521 -10788135 + SAR_DM Satellite Satellite 1 700 -680 1 723 428 0 0 0 chrUextra 18217417 18217466 -10787190 - LSU-rRNA_Dme rRNA rRNA -2064 1836 1788 1 723 4989 2 5 5 chrUextra 18217510 18218107 -10786549 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1192 1 723 5763 3 1 4 chrUextra 18218207 18218900 -10785756 + R1_DM LINE R1 806 1496 -3860 1 90 2983 178 12 7 chrUextra 18219000 18219691 -10784965 - SAR_DM Satellite Satellite -594 878 185 1 724 1668 13 18 18 chrUextra 18219793 18220022 -10784634 + NTS_DM Other Other 12 240 0 1 724 1738 21 17 17 chrUextra 18220022 18220262 -10784394 + NTS_DM Other Other 1 240 0 1 724 1736 9 13 13 chrUextra 18220262 18220486 -10784170 + NTS_DM Other Other 1 224 -16 1 724 5253 51 4 3 chrUextra 18220586 18221279 -10783377 + G2_DM LINE Jockey 172 865 -2237 1 724 5801 3 1 0 chrUextra 18222172 18222839 -10781817 - LSU-rRNA_Dme rRNA rRNA -595 3305 2638 1 724 236 33 0 0 chrUextra 18222835 18222865 -10781791 - R1_DM LINE R1 0 5356 5327 1 724 5690 10 0 0 chrUextra 18222965 18223658 -10780998 + R1_DM LINE R1 370 1062 -4294 1 724 260 0 0 0 chrUextra 18223758 18223789 -10780867 - LSU-rRNA_Dme rRNA rRNA -3869 31 1 1 724 34 24 0 0 chrUextra 18224078 18224119 -10780537 + AT_rich Low_complexity Low_complexity 1 41 0 1 724 1482 201 31 22 chrUextra 18224551 18225244 -10779412 + SAR_DM Satellite Satellite 1 698 -203 1 724 5939 3 0 0 chrUextra 18225347 18226037 -10778619 + R1_DM LINE R1 1264 1953 -3403 1 724 5775 7 6 1 chrUextra 18226137 18226830 -10777826 + DM176_I LTR Gypsy 2763 3458 -2962 1 724 907 23 0 8 chrUextra 18226930 18227060 -10777596 + NTS_DM Other Other 73 201 -39 1 724 21 57 0 0 chrUextra 18227060 18227095 -10777561 + AT_rich Low_complexity Low_complexity 1 35 0 1 724 832 9 9 27 chrUextra 18227121 18227232 -10777424 + NTS_DM Other Other 25 133 -107 1 724 817 0 0 0 chrUextra 18227232 18227328 -10777328 + NTS_DM Other Other 38 133 -107 1 724 1408 20 20 20 chrUextra 18227328 18227531 -10777125 + NTS_DM Other Other 38 240 0 1 724 736 22 11 0 chrUextra 18227531 18227623 -10777033 + NTS_DM Other Other 1 93 -147 1 724 3033 162 19 23 chrUextra 18227723 18228416 -10776240 + SAR_DM Satellite Satellite 411 1100 -372 1 724 210 37 0 0 chrUextra 18228918 18228945 -10775711 + (TTA)n Simple_repeat Simple_repeat 1 27 0 1 724 30 27 0 0 chrUextra 18229062 18229099 -10775557 + AT_rich Low_complexity Low_complexity 1 37 0 1 724 981 108 0 6 chrUextra 18229315 18229482 -10775174 + NTS_DM Other Other 8 173 -67 1 724 267 85 43 0 chrUextra 18229512 18229559 -10775097 + NTS_DM Other Other 1 49 -191 1 724 1108 124 30 22 chrUextra 18229655 18229886 -10774770 + NTS_DM Other Other 8 240 0 1 724 3079 22 5 51 chrUextra 18230102 18230532 -10774124 - CIRCE LINE Composite -966 5390 4981 1 724 2413 92 35 13 chrUextra 18230896 18231583 -10773073 + DMSAT6 Satellite Satellite 1 702 -92 1 724 5408 14 0 0 chrUextra 18231688 18232322 -10772334 + Gypsy2_I LTR Gypsy 1081 1714 -4421 1 724 3133 167 10 9 chrUextra 18232497 18233173 -10771483 + SAR_DM Satellite Satellite 332 1008 -464 1 724 3415 45 117 0 chrUextra 18233274 18233806 -10770850 + PROTOP DNA P 160 753 -3727 1 724 1235 45 11 0 chrUextra 18233776 18233953 -10770703 + PROTOP_A DNA P 588 766 -339 1 724 5244 26 25 1 chrUextra 18234067 18234760 -10769896 + PROTOP DNA P 88 796 -3684 1 724 5604 21 0 17 chrUextra 18234860 18235550 -10769106 - Gypsy12_I LTR Gypsy -4233 1313 636 1 724 2340 108 26 16 chrUextra 18235653 18236341 -10768315 + DMSAT6 Satellite Satellite 1 695 -40 1 724 3003 6 0 0 chrUextra 18236446 18236793 -10767863 + QUASIMODO_LTR LTR Gypsy 312 658 0 1 724 21 0 0 0 chrUextra 18236793 18236814 -10767842 + AT_rich Low_complexity Low_complexity 1 21 0 1 724 551 0 131 6 chrUextra 18236814 18237135 -10767521 + (TA)n Simple_repeat Simple_repeat 1 361 0 1 724 5379 32 1 9 chrUextra 18237239 18237932 -10766724 - BATUMI_I LTR Pao -4443 3520 2833 1 724 1875 4 9 9 chrUextra 18238032 18238265 -10766391 - R1_DM LINE R1 -5123 233 1 1 724 3859 13 2 0 chrUextra 18238265 18238725 -10765931 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2172 1 724 245 125 46 15 chrUextra 18239227 18239292 -10765364 + (TAA)n Simple_repeat Simple_repeat 2 68 0 1 724 22 35 0 0 chrUextra 18239486 18239515 -10765141 + AT_rich Low_complexity Low_complexity 1 29 0 1 724 3069 168 9 6 chrUextra 18239622 18240281 -10764375 - SAR_DM Satellite Satellite -620 852 192 1 724 743 104 8 0 chrUextra 18240186 18240311 -10764345 + ARS406_DM Unknown Unknown 1 126 -227 1 724 5998 0 1 0 chrUextra 18240411 18241104 -10763552 - G_DM LINE Jockey -2712 1634 941 1 724 2171 104 26 34 chrUextra 18241210 18241897 -10762759 - DMSAT6 Satellite Satellite -3 681 1 1 724 2739 198 15 20 chrUextra 18241997 18242690 -10761966 - SAR_DM Satellite Satellite -652 689 1 1 724 22 35 0 0 chrUextra 18242883 18242912 -10761744 + AT_rich Low_complexity Low_complexity 1 29 0 1 724 4614 11 0 0 chrUextra 18242946 18243483 -10761173 + Copia2_I LTR Copia 3117 3653 -509 1 724 754 289 10 10 chrUextra 18244396 18244704 -10759952 - MDG3_I LTR Gypsy -1347 3639 3332 1 724 428 272 32 32 chrUextra 18244869 18245055 -10759601 - Invader3_I LTR Gypsy -1678 3210 3025 1 724 1123 18 23 23 chrUextra 18245169 18245341 -10759315 + NTS_DM Other Other 69 240 0 1 724 1744 21 17 17 chrUextra 18245341 18245581 -10759075 + NTS_DM Other Other 1 240 0 1 724 1726 17 17 21 chrUextra 18245581 18245822 -10758834 + NTS_DM Other Other 1 240 0 1 724 332 25 0 0 chrUextra 18245822 18245862 -10758794 + NTS_DM Other Other 1 40 -200 1 724 5964 1 3 1 chrUextra 18245962 18246655 -10758001 - SSU-rRNA_Dme rRNA rRNA -743 1252 559 1 724 1795 5 0 5 chrUextra 18246757 18246969 -10757687 + NOMAD_LTR LTR Gypsy 308 518 0 1 724 551 0 127 10 chrUextra 18246974 18247443 -10757213 + (TA)n Simple_repeat Simple_repeat 1 523 0 1 724 5537 17 42 1 chrUextra 18247548 18248241 -10756415 - R1_DM LINE R1 -868 4488 3768 1 724 5603 14 19 0 chrUextra 18248341 18249034 -10755622 + DOC2_DM LINE Jockey 1237 1942 -2851 1 724 5913 6 0 0 chrUextra 18249136 18249827 -10754829 + R1_DM LINE R1 4575 5265 -91 1 724 5193 48 0 6 chrUextra 18249927 18250620 -10754036 + R1_DM LINE R1 206 894 -4462 1 724 2438 7 0 0 chrUextra 18252306 18252605 -10752051 + DM176_I LTR Gypsy 6122 6420 0 1 724 2178 14 0 78 chrUextra 18252605 18252912 -10751744 + DM176_LTR LTR Gypsy 1 283 -224 1 724 639 23 47 0 chrUextra 18252913 18252999 -10751657 + DM176_LTR LTR Gypsy 251 340 -167 1 724 1367 199 0 0 chrUextra 18253099 18253390 -10751266 - STALKER4_I LTR Gypsy -6005 525 235 1 724 31 58 0 0 chrUextra 18253391 18253443 -10751213 + AT_rich Low_complexity Low_complexity 1 52 0 1 724 1662 73 3 33 chrUextra 18253531 18253792 -10750864 - STALKER4_LTR LTR Gypsy -3 399 151 1 724 2886 179 9 13 chrUextra 18253895 18254585 -10750071 + SAR_DM Satellite Satellite 282 968 -504 1 724 1863 51 17 42 chrUextra 18254685 18254972 -10749684 - Gypsy12_I LTR Gypsy -5266 280 1 1 724 2235 128 10 20 chrUextra 18254972 18255377 -10749279 - Gypsy12A_LTR LTR Gypsy 0 2280 1880 1 724 5507 13 17 1 chrUextra 18255478 18256171 -10748485 - Invader2_I LTR Gypsy -3726 866 163 1 724 2465 108 18 13 chrUextra 18256272 18256954 -10747702 - DMSAT6 Satellite Satellite -23 685 1 1 724 5893 3 0 1 chrUextra 18257064 18257757 -10746899 + ROO_I LTR Pao 1030 1721 -6535 1 724 5610 23 22 0 chrUextra 18257857 18258548 -10746108 - R1_DM LINE R1 -1602 3754 3049 1 724 2869 171 25 27 chrUextra 18259443 18260136 -10744520 + SAR_DM Satellite Satellite 413 1103 -369 1 724 5976 1 3 0 chrUextra 18260236 18260929 -10743727 + DIVER_I LTR Pao 205 899 -4744 1 724 5926 9 1 0 chrUextra 18261029 18261722 -10742934 + Gypsy4_I LTR Gypsy 2689 3382 -2906 1 724 2431 53 44 0 chrUextra 18262173 18262515 -10742141 - DOC3_DM LINE Jockey -3291 1449 1093 1 724 2245 45 0 0 chrUextra 18262615 18262901 -10741755 - PROTOP_A DNA P -819 286 1 1 724 2763 87 0 5 chrUextra 18262901 18263306 -10741350 - S_DM DNA Tc1 -747 989 587 1 724 2194 190 41 3 chrUextra 18264201 18264894 -10739762 + SAR_DM Satellite Satellite 1 719 -524 1 724 2260 77 4 49 chrUextra 18264994 18265685 -10738971 + DMSAT6 Satellite Satellite 1 659 -69 1 724 5735 9 0 0 chrUextra 18265787 18266480 -10738176 + IDEFIX_I LTR Gypsy 492 1184 -4444 1 724 5790 19 1 0 chrUextra 18266583 18267273 -10737383 + Gypsy4_I LTR Gypsy 5358 6048 -240 1 724 5557 11 3 0 chrUextra 18267373 18268066 -10736590 - PROTOP_A DNA P -163 942 248 1 724 367 106 15 0 chrUextra 18268166 18268232 -10736424 - ARS406_DM Unknown Unknown -286 67 1 1 724 3002 179 5 6 chrUextra 18268192 18268851 -10735805 + SAR_DM Satellite Satellite 246 903 -569 1 724 5805 23 0 0 chrUextra 18268959 18269652 -10735004 - R1_DM LINE R1 -592 4764 4072 1 724 643 13 0 0 chrUextra 18269752 18269828 -10734828 + PROTOP_A DNA P 80 155 -950 1 724 4419 82 3 13 chrUextra 18269826 18270445 -10734211 + Gypsy12_I LTR Gypsy 4657 5269 -277 1 724 2773 185 9 22 chrUextra 18270548 18271238 -10733418 - SAR_DM Satellite Satellite -354 1118 438 1 724 5377 40 13 1 chrUextra 18271338 18272031 -10732625 + R1_DM LINE R1 1168 1868 -3488 1 724 2671 0 0 0 chrUextra 18272131 18272434 -10732222 + LSU-rRNA_Dme rRNA rRNA 2350 2652 -1248 1 724 3076 6 6 0 chrUextra 18272463 18272824 -10731832 + R1_DM LINE R1 1 363 -4993 1 724 5893 17 0 0 chrUextra 18272924 18273617 -10731039 + MAX_I LTR Pao 6110 6802 -1112 1 724 1600 178 61 58 chrUextra 18273717 18274374 -10730282 + HETA LINE telomeric 19 677 -5404 1 724 4276 102 66 13 chrUextra 18274510 18275203 -10729453 - Gypsy12_I LTR Gypsy -3639 1907 1178 1 724 1681 175 3 6 chrUextra 18275303 18275665 -10728991 - SAR_DM Satellite Satellite -616 856 496 1 724 1604 150 6 6 chrUextra 18275680 18275995 -10728661 - SAR_DM Satellite Satellite -569 903 589 1 724 5971 1 0 0 chrUextra 18276096 18276789 -10727867 + LSU-rRNA_Dme rRNA rRNA 583 1275 -2625 1 724 247 271 103 51 chrUextra 18277764 18277978 -10726678 + Invader2_I LTR Gypsy 2112 2336 -2256 1 724 295 123 35 0 chrUextra 18278318 18278375 -10726281 + DMCR1A LINE CR1 86 144 -4326 1 724 5936 0 0 1 chrUextra 18278475 18279168 -10725488 + ROO_I LTR Pao 1048 1739 -6517 1 724 262 106 0 21 chrUextra 18279368 18279416 -10725240 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 724 351 49 65 16 chrUextra 18279438 18279500 -10725156 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 724 873 178 102 15 chrUextra 18279499 18279704 -10724952 - DMLTR5 LTR Gypsy 0 266 44 1 724 27 29 0 0 chrUextra 18280110 18280144 -10724512 + AT_rich Low_complexity Low_complexity 1 34 0 1 724 22 56 0 0 chrUextra 18280208 18280244 -10724412 + AT_rich Low_complexity Low_complexity 1 36 0 1 724 27 29 0 0 chrUextra 18280308 18280342 -10724314 + AT_rich Low_complexity Low_complexity 1 34 0 1 724 246 150 0 0 chrUextra 18280347 18280387 -10724269 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 724 246 150 0 0 chrUextra 18280538 18280578 -10724078 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 724 255 125 0 0 chrUextra 18280621 18280661 -10723995 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 724 22 56 0 0 chrUextra 18280674 18280710 -10723946 + AT_rich Low_complexity Low_complexity 1 36 0 1 724 4829 99 0 0 chrUextra 18280867 18281546 -10723110 - Gypsy12_I LTR Gypsy -2121 3425 2747 1 724 2889 180 14 22 chrUextra 18281647 18282340 -10722316 + SAR_DM Satellite Satellite 413 1100 -372 1 724 356 52 35 0 chrUextra 18282440 18282498 -10722158 - SAR_DM Satellite Satellite -673 799 740 1 724 3411 34 39 2 chrUextra 18282511 18283133 -10721523 + DOC2_DM LINE Jockey 10 686 -4107 1 724 5486 38 1 4 chrUextra 18283233 18283926 -10720730 + MAX_I LTR Pao 2563 3253 -4661 1 724 2627 136 23 65 chrUextra 18284026 18284584 -10720072 + Gypsy12_LTR LTR Gypsy 1802 2336 0 1 724 756 57 31 31 chrUextra 18284584 18284711 -10719945 + Gypsy12_I LTR Gypsy 1 127 -5419 1 724 5973 0 0 0 chrUextra 18284819 18285512 -10719144 - DOC LINE Jockey -2965 1760 1068 1 724 3049 183 6 6 chrUextra 18285612 18286299 -10718357 + SAR_DM Satellite Satellite 389 1075 -397 1 724 324 200 0 0 chrUextra 18286405 18286500 -10718156 + (CATAA)n Simple_repeat Simple_repeat 2 96 0 1 724 246 150 0 0 chrUextra 18287277 18287317 -10717339 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 724 246 150 0 0 chrUextra 18287369 18287409 -10717247 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 724 246 150 0 0 chrUextra 18287461 18287501 -10717155 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 724 246 150 0 0 chrUextra 18287553 18287593 -10717063 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 724 246 150 0 0 chrUextra 18287645 18287685 -10716971 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 724 246 150 0 0 chrUextra 18287737 18287777 -10716879 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 724 228 150 0 0 chrUextra 18287820 18287860 -10716796 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 724 2965 53 31 12 chrUextra 18287991 18288408 -10716248 - G2_DM LINE Jockey -124 2978 2554 1 724 968 44 0 0 chrUextra 18288400 18288535 -10716121 + G2_DM LINE Jockey 2934 3068 -34 1 724 4998 2 0 2 chrUextra 18288904 18289477 -10715179 + SSU-rRNA_Dme rRNA rRNA 1 572 -1423 1 724 5518 22 3 0 chrUextra 18289577 18290270 -10714386 + QUASIMODO_I LTR Gypsy 2872 3566 -2494 1 724 5980 3 0 0 chrUextra 18290370 18291063 -10713593 + R1_DM LINE R1 3080 3772 -1584 1 724 3481 84 69 92 chrUextra 18291203 18291856 -10712800 - Invader1_I LTR Gypsy 0 3186 2549 1 724 5460 33 4 4 chrUextra 18291956 18292649 -10712007 + R1_DM LINE R1 1340 2032 -3324 1 724 554 0 0 15 chrUextra 18293375 18293442 -10711214 + (TCTTG)n Simple_repeat Simple_repeat 1 66 0 1 724 3075 165 13 10 chrUextra 18293544 18294230 -10710426 - SAR_DM Satellite Satellite -416 1056 369 1 724 5961 1 1 3 chrUextra 18294335 18295028 -10709628 + SSU-rRNA_Dme rRNA rRNA 508 1199 -796 1 724 2588 114 127 6 chrUextra 18295130 18295748 -10708908 - TART LINE telomeric -6799 7678 7159 1 724 418 94 16 0 chrUextra 18295757 18295821 -10708835 - TART LINE telomeric -7457 7020 6956 1 724 3086 159 9 9 chrUextra 18295924 18296572 -10708084 + SAR_DM Satellite Satellite 346 993 -479 1 724 2717 197 7 17 chrUextra 18296715 18297407 -10707249 - SAR_DM Satellite Satellite -361 1111 427 1 724 1176 0 0 0 chrUextra 18297511 18297646 -10707010 - 5S_DM RNA RNA 0 135 1 1 724 1067 15 0 62 chrUextra 18297870 18298014 -10706642 - 5S_DM RNA RNA 0 135 1 1 724 2945 176 10 12 chrUextra 18299102 18299786 -10704870 - SAR_DM Satellite Satellite -416 1056 374 1 724 5841 14 0 0 chrUextra 18299886 18300579 -10704077 - Invader3_I LTR Gypsy -811 4077 3385 1 724 5789 19 0 0 chrUextra 18300679 18301372 -10703284 + DM1731_I LTR Copia 2833 3525 -451 1 724 1356 23 0 6 chrUextra 18301472 18301648 -10703008 - NTS_DM Other Other -65 175 1 1 724 1710 13 17 17 chrUextra 18301648 18301880 -10702776 - NTS_DM Other Other 0 240 9 1 724 34 24 0 0 chrUextra 18302526 18302567 -10702089 + AT_rich Low_complexity Low_complexity 1 41 0 1 724 21 95 0 0 chrUextra 18302782 18302845 -10701811 + AT_rich Low_complexity Low_complexity 1 63 0 1 724 880 0 0 0 chrUextra 18302857 18302958 -10701698 + LSU-rRNA_Dme rRNA rRNA 1 101 -3799 1 724 4224 45 53 46 chrUextra 18303058 18303751 -10700905 - PROTOP_A DNA P -156 949 252 1 724 3143 158 13 14 chrUextra 18303851 18304544 -10700112 - SAR_DM Satellite Satellite -435 1037 346 1 724 5361 48 1 1 chrUextra 18304644 18305337 -10699319 - R1_DM LINE R1 -3568 1788 1096 1 724 4527 0 0 0 chrUextra 18305465 18305983 -10698673 - NOMAD_LTR LTR Gypsy 0 518 1 1 724 945 122 0 0 chrUextra 18305983 18306130 -10698526 + (TATG)n Simple_repeat Simple_repeat 4 150 0 1 724 5856 1 1 0 chrUextra 18306230 18306921 -10697735 - MDG3_I LTR Gypsy -2345 2641 1950 1 724 2551 163 7 6 chrUextra 18307024 18307716 -10696940 + SAR_DM Satellite Satellite 1 692 -500 1 724 3800 36 34 0 chrUextra 18307816 18308494 -10696162 - DOC2_DM LINE Jockey -4052 741 6 1 724 2654 226 48 27 chrUextra 18308609 18310095 -10694561 - SAR_DM Satellite Satellite -398 1517 1 1 724 3188 105 4 40 chrUextra 18310195 18310888 -10693768 + Gypsy12_I LTR Gypsy 376 1101 -4445 1 724 5960 3 0 1 chrUextra 18311781 18312474 -10692182 + FW_DM LINE Jockey 1903 2594 -2098 1 724 5893 6 17 0 chrUextra 18312574 18313267 -10691389 + Invader1_I LTR Gypsy 1212 1916 -1270 1 724 2763 157 14 38 chrUextra 18313371 18314007 -10690649 - SAR_DM Satellite Satellite -483 989 369 1 724 521 284 39 29 chrUextra 18313739 18314051 -10690605 + XDMR_DM Unknown Unknown 46 360 0 1 724 233 204 0 0 chrUextra 18314160 18314214 -10690442 + XDMR Unknown Unknown 308 361 0 1 724 2839 183 9 19 chrUextra 18314168 18314853 -10689803 - SAR_DM Satellite Satellite -361 1111 434 1 724 5164 34 40 10 chrUextra 18314953 18315646 -10689010 + ROO_I LTR Pao 4247 4960 -3296 1 724 5785 19 0 0 chrUextra 18315749 18316439 -10688217 - ROO_I LTR Pao -5367 2889 2200 1 724 4113 77 33 39 chrUextra 18316539 18317232 -10687424 - Gypsy10_I LTR Gypsy -4338 940 252 1 724 2576 77 121 2 chrUextra 18317332 18317904 -10686752 + Gypsy12_I LTR Gypsy 4907 5546 0 1 724 521 181 8 49 chrUextra 18317903 18318025 -10686631 + Gypsy12_LTR LTR Gypsy 1 117 -2219 1 724 5321 22 1 6 chrUextra 18318125 18318818 -10685838 - IDEFIX_I LTR Gypsy -1648 3980 3291 1 724 322 178 50 101 chrUextra 18318989 18319108 -10685548 + Copia_I LTR Copia 4401 4513 -80 1 724 1985 8 0 0 chrUextra 18319847 18320087 -10684569 - ALUII_DM Unknown Unknown 0 240 1 1 724 21 57 0 0 chrUextra 18320087 18320122 -10684534 + AT_rich Low_complexity Low_complexity 1 35 0 1 724 22 35 0 0 chrUextra 18320319 18320348 -10684308 + AT_rich Low_complexity Low_complexity 1 29 0 1 724 21 89 0 0 chrUextra 18321688 18321744 -10682912 + AT_rich Low_complexity Low_complexity 1 56 0 1 724 1888 0 0 13 chrUextra 18321763 18321990 -10682666 - SSU-rRNA_Dme rRNA rRNA 0 1995 1772 1 724 2225 11 0 4 chrUextra 18322090 18322353 -10682303 + MAX_I LTR Pao 3729 3990 -3924 1 724 3367 47 0 0 chrUextra 18322351 18322780 -10681876 + MAX_I LTR Pao 5382 5810 -2104 1 724 5496 3 0 5 chrUextra 18322923 18323576 -10681080 - DOC LINE Jockey 0 4725 4076 1 724 5898 0 0 1 chrUextra 18323676 18324369 -10680287 - LSU-rRNA_Dme rRNA rRNA -2757 1143 452 1 724 528 108 81 0 chrUextra 18324626 18324737 -10679919 + TART LINE telomeric 10370 10489 -3988 1 724 34 24 0 0 chrUextra 18324750 18324791 -10679865 + AT_rich Low_complexity Low_complexity 1 41 0 1 724 5934 4 0 0 chrUextra 18325262 18325955 -10678701 - R1_DM LINE R1 -1720 3636 2944 1 724 2911 54 118 15 chrUextra 18326056 18326580 -10678076 + FW3_DM LINE Jockey 722 1299 -1833 1 724 1293 24 12 0 chrUextra 18326580 18326748 -10677908 + TC1_DM DNA Tc1 1 170 -1496 1 724 1581 170 11 10 chrUextra 18326848 18327539 -10677117 + SAR_DM Satellite Satellite 1 691 -677 1 724 2742 178 17 25 chrUextra 18327641 18328334 -10676322 - SAR_DM Satellite Satellite -356 1116 429 1 724 2064 0 4 0 chrUextra 18328434 18328675 -10675981 - FW_DM LINE Jockey -1137 3555 3314 1 724 1404 108 0 9 chrUextra 18328706 18328921 -10675735 - BS2 LINE Jockey -4259 462 250 1 724 360 274 20 0 chrUextra 18328932 18329034 -10675622 - GTWIN_I LTR Gypsy -4772 1649 1546 1 724 1005 17 0 0 chrUextra 18329231 18329350 -10675306 + (CTTAT)n Simple_repeat Simple_repeat 3 121 0 1 724 709 0 0 0 chrUextra 18330020 18330102 -10674554 - ROO_LTR LTR Pao -346 82 1 1 724 5225 7 2 0 chrUextra 18330102 18330713 -10673943 - R1_DM LINE R1 -431 4925 4314 1 724 5062 16 3 0 chrUextra 18330813 18331420 -10673236 - R1_DM LINE R1 -4747 609 1 1 724 616 0 0 0 chrUextra 18331436 18331506 -10673150 - LSU-rRNA_Dme rRNA rRNA -1249 2651 2582 1 724 402 21 0 0 chrUextra 18331606 18331653 -10673003 + (TTCTC)n Simple_repeat Simple_repeat 4 50 0 1 724 269 43 255 0 chrUextra 18332399 18332446 -10672210 - BATUMI_I LTR Pao -6510 1453 1395 1 724 3043 111 17 41 chrUextra 18332467 18333050 -10671606 - BATUMI_I LTR Pao -6646 1317 749 1 724 1903 186 62 13 chrUextra 18333194 18333883 -10670773 - SAR_DM Satellite Satellite -670 722 1 1 724 449 303 8 2 chrUextra 18334498 18334677 -10669979 - Gypsy5_I LTR Gypsy -3597 2912 2749 1 724 2393 85 25 22 chrUextra 18334778 18335471 -10669185 - DMSAT6 Satellite Satellite -38 695 1 1 724 3351 63 44 35 chrUextra 18335571 18336263 -10668393 + PROTOP_A DNA P 461 1105 -48 1 724 5874 12 0 0 chrUextra 18336363 18337055 -10667601 + Gypsy4_I LTR Gypsy 1105 1796 -4492 1 724 5990 0 1 1 chrUextra 18337158 18337847 -10666809 - SSU-rRNA_Dme rRNA rRNA 0 1995 1307 1 724 2539 184 61 21 chrUextra 18337955 18338639 -10666017 + SAR_DM Satellite Satellite 1 711 -216 1 724 339 223 0 19 chrUextra 18338740 18338845 -10665811 + XDMR_DM Unknown Unknown 258 360 0 1 724 2637 189 7 22 chrUextra 18338759 18339431 -10665225 - SAR_DM Satellite Satellite -354 1118 457 1 724 626 139 16 0 chrUextra 18339531 18339653 -10665003 - ARS406_DM Unknown Unknown -229 124 1 1 724 2737 183 12 9 chrUextra 18339560 18340222 -10664434 + SAR_DM Satellite Satellite 195 858 -614 1 724 4612 9 35 2 chrUextra 18340339 18340914 -10663742 + IDEFIX_LTR LTR Gypsy 1 594 0 1 724 5649 0 1 1 chrUextra 18341159 18341807 -10662849 - LSU-rRNA_Dme rRNA rRNA 0 3900 3253 1 724 5936 0 0 1 chrUextra 18341907 18342599 -10662057 - LSU-rRNA_Dme rRNA rRNA -2653 1247 557 1 724 5891 1 0 0 chrUextra 18342699 18343391 -10661265 - ROO_I LTR Pao -3973 4283 3592 1 724 5849 3 4 3 chrUextra 18343491 18344183 -10660473 + LSU-rRNA_Dme rRNA rRNA 1028 1720 -2180 1 724 6001 4 1 0 chrUextra 18344283 18344975 -10659681 - LSU-rRNA_Dme rRNA rRNA -59 3841 3149 1 724 5841 0 1 1 chrUextra 18345075 18345767 -10658889 - R1_DM LINE R1 -3905 1451 760 1 724 2622 203 12 7 chrUextra 18345867 18346552 -10658104 + SAR_DM Satellite Satellite 389 1076 -396 1 724 3475 53 57 40 chrUextra 18346659 18347351 -10657305 + DM176_I LTR Gypsy 274 911 -5509 1 724 4970 93 0 0 chrUextra 18347451 18348142 -10656514 - HMSBEAGLE_I LTR Gypsy -1982 4547 3857 1 724 28 48 0 0 chrUextra 18348330 18348372 -10656284 + AT_rich Low_complexity Low_complexity 1 42 0 1 724 32 0 0 0 chrUextra 18348700 18348732 -10655924 + AT_rich Low_complexity Low_complexity 1 32 0 1 724 601 14 0 0 chrUextra 18348864 18348935 -10655721 + SSU-rRNA_Dme rRNA rRNA 1 71 -1924 1 724 2264 183 28 7 chrUextra 18349035 18349725 -10654931 - SAR_DM Satellite Satellite -711 704 1 1 90 5709 16 1 1 chrUextra 18349827 18350519 -10654137 + R1_DM LINE R1 3547 4238 -1118 1 725 2349 168 11 11 chrUextra 18350628 18351151 -10653505 + SAR_DM Satellite Satellite 369 891 -581 1 725 1146 52 7 0 chrUextra 18351157 18351311 -10653345 - Gypsy6A_LTR LTR Gypsy 0 420 266 1 725 5937 10 1 0 chrUextra 18351411 18352103 -10652553 + Gypsy6_I LTR Gypsy 789 1481 -5531 1 725 5728 6 1 1 chrUextra 18352207 18352895 -10651761 - R1_DM LINE R1 -3951 1405 718 1 725 5257 9 1 40 chrUextra 18352995 18353687 -10650969 - LSU-rRNA_Dme rRNA rRNA -3118 782 118 1 725 783 116 78 123 chrUextra 18353787 18353941 -10650715 + Gypsy12A_LTR LTR Gypsy 2125 2313 -23 1 725 738 178 199 55 chrUextra 18353931 18354347 -10650309 + TART LINE telomeric 10015 10489 -3988 1 725 5833 15 0 4 chrUextra 18354581 18355271 -10649385 - BATUMI_I LTR Pao -1920 6043 5357 1 725 328 0 22 0 chrUextra 18355371 18355417 -10649239 + FW_DM LINE Jockey 1356 1402 -3290 1 725 5514 1 0 0 chrUextra 18355416 18356063 -10648593 + DOC LINE Jockey 471 1117 -3608 1 725 28 48 0 0 chrUextra 18356377 18356419 -10648237 + AT_rich Low_complexity Low_complexity 1 42 0 1 725 32 0 0 0 chrUextra 18356747 18356779 -10647877 + AT_rich Low_complexity Low_complexity 1 32 0 1 725 2464 91 46 6 chrUextra 18356974 18357646 -10647010 + DMSAT6 Satellite Satellite 1 699 0 1 725 5496 4 0 0 chrUextra 18358547 18359231 -10645425 + DM176_I LTR Gypsy 5444 6127 -293 1 725 5423 10 3 0 chrUextra 18359331 18360023 -10644633 + DM176_I LTR Gypsy 5375 6068 -352 1 725 2668 197 18 25 chrUextra 18360123 18360815 -10643841 - SAR_DM Satellite Satellite -638 686 1 1 725 4648 40 64 9 chrUextra 18360917 18361573 -10643083 - PROTOP DNA P -3788 692 1 1 725 697 193 0 7 chrUextra 18362620 18362766 -10641890 + DMLTR5 LTR Gypsy 122 266 0 1 725 351 85 661 14 chrUextra 18362765 18362897 -10641759 + HMSBEAGLE_I LTR Gypsy 1 221 -6308 1 725 244 128 0 21 chrUextra 18363127 18363175 -10641481 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 725 1966 211 69 15 chrUextra 18364098 18364775 -10639881 - SAR_DM Satellite Satellite -397 713 1 1 725 2058 0 0 0 chrUextra 18364875 18365108 -10639548 - Invader1_I LTR Gypsy -2953 233 1 1 725 3622 7 2 0 chrUextra 18365108 18365530 -10639126 - Invader1_LTR LTR Gypsy 0 423 1 1 725 2649 200 25 10 chrUextra 18365667 18366359 -10638297 + SAR_DM Satellite Satellite 256 957 -515 1 725 535 159 0 17 chrUextra 18366459 18366574 -10638082 - R1_DM LINE R1 -4670 686 574 1 725 982 102 29 29 chrUextra 18366575 18366747 -10637909 - R1_DM LINE R1 -5184 172 1 1 725 1941 68 3 35 chrUextra 18366765 18367054 -10637602 + Gypsy6A_LTR LTR Gypsy 71 350 -70 1 725 630 83 0 0 chrUextra 18367053 18367149 -10637507 - Stalker2_I LTR Gypsy -4238 3164 3069 1 725 5709 0 3 3 chrUextra 18367251 18367943 -10636713 + STALKER4_I LTR Gypsy 1144 1835 -4695 1 725 3816 12 123 0 chrUextra 18368043 18368530 -10636126 + R1_DM LINE R1 4810 5356 0 1 725 1200 87 11 0 chrUextra 18368551 18368735 -10635921 + R1_DM LINE R1 23 208 -5148 1 725 2597 185 52 7 chrUextra 18368836 18369527 -10635129 - SAR_DM Satellite Satellite -546 926 205 1 725 2152 171 88 4 chrUextra 18369701 18370154 -10634502 - FW_DM LINE Jockey -3176 1516 1026 1 725 1245 55 6 0 chrUextra 18370154 18370319 -10634337 + FB4_DM DNA Tc1 1 166 -3923 1 725 2023 198 8 19 chrUextra 18370420 18370900 -10633756 - DM297_I LTR Gypsy -5042 1125 651 1 725 801 0 0 0 chrUextra 18371211 18371311 -10633345 + LSU-rRNA_Dme rRNA rRNA 426 525 -3375 1 725 5131 5 0 0 chrUextra 18371307 18371903 -10632753 + LSU-rRNA_Dme rRNA rRNA 676 1271 -2629 1 725 5731 28 0 0 chrUextra 18372003 18372695 -10631961 + DIVER_I LTR Pao 1944 2635 -3008 1 725 2013 171 11 6 chrUextra 18372795 18373486 -10631170 + SAR_DM Satellite Satellite 1 694 -677 1 725 2553 0 0 0 chrUextra 18373587 18373917 -10630739 + HMSBEAGLE_I LTR Gypsy 458 787 -5742 1 725 677 33 49 16 chrUextra 18373933 18374055 -10630601 + (TTA)n Simple_repeat Simple_repeat 3 128 0 1 725 1797 5 0 0 chrUextra 18374055 18374279 -10630377 + HMSBEAGLE_I LTR Gypsy 976 1199 -5330 1 725 824 25 0 8 chrUextra 18374379 18374501 -10630155 + NTS_DM Other Other 81 201 -39 1 725 870 9 0 27 chrUextra 18374553 18374665 -10629991 + NTS_DM Other Other 25 133 -107 1 725 1252 18 0 6 chrUextra 18374665 18374830 -10629826 + NTS_DM Other Other 38 201 -39 1 725 21 57 0 0 chrUextra 18374830 18374865 -10629791 + AT_rich Low_complexity Low_complexity 1 35 0 1 725 802 9 9 36 chrUextra 18374891 18375003 -10629653 + NTS_DM Other Other 25 133 -107 1 725 542 29 0 0 chrUextra 18375003 18375071 -10629585 + NTS_DM Other Other 38 105 -135 1 725 2271 92 1 69 chrUextra 18375177 18375863 -10628793 + DMSAT6 Satellite Satellite 1 639 -82 1 725 2261 62 0 75 chrUextra 18375967 18376313 -10628343 + CIRCE LINE Composite 973 1292 -5064 1 725 543 335 22 22 chrUextra 18376225 18376536 -10628120 + Gypsy12_I LTR Gypsy 3059 3369 -2177 1 725 1821 20 0 80 chrUextra 18376379 18376643 -10628013 + CIRCE LINE Composite 1305 1547 -4809 1 725 25 31 0 0 chrUextra 18377415 18377447 -10627209 + AT_rich Low_complexity Low_complexity 1 32 0 1 725 5077 32 12 4 chrUextra 18377547 18378239 -10626417 + PROTOP_A DNA P 235 931 -174 1 725 696 243 107 11 chrUextra 18378396 18378667 -10625989 - BS LINE Jockey -1688 3438 3142 1 725 323 334 41 56 chrUextra 18379231 18379627 -10625029 - Gypsy6_I LTR Gypsy -5228 1784 1344 1 725 5494 26 29 0 chrUextra 18379923 18380615 -10624041 + FW_DM LINE Jockey 3171 3882 -810 1 725 300 132 12 24 chrUextra 18380770 18380855 -10623801 + A-rich Low_complexity Low_complexity 1 84 0 1 725 1931 48 8 0 chrUextra 18381158 18381407 -10623249 - DMRT1A LINE R1 -12 5171 4921 1 725 5600 29 0 0 chrUextra 18381507 18382199 -10622457 + R1_DM LINE R1 2715 3406 -1950 1 725 5712 13 0 19 chrUextra 18382299 18382991 -10621665 - Gypsy6_I LTR Gypsy -1019 5993 5315 1 725 4989 21 0 2 chrUextra 18383174 18383783 -10620873 - DOC2_DM LINE Jockey -1 4792 4185 1 725 5920 7 0 0 chrUextra 18383883 18384575 -10620081 - DOC2_DM LINE Jockey -1049 3744 3053 1 725 5205 0 3 69 chrUextra 18384675 18385367 -10619289 - LSU-rRNA_Dme rRNA rRNA -1947 1953 1308 1 725 322 178 50 101 chrUextra 18385584 18385703 -10618953 - Copia_I LTR Copia -80 4513 4401 1 725 22 56 0 0 chrUextra 18385748 18385784 -10618872 + AT_rich Low_complexity Low_complexity 1 36 0 1 725 961 192 68 9 chrUextra 18385938 18386159 -10618497 + HETA LINE telomeric 4031 4264 -1817 1 725 5535 0 0 1 chrUextra 18386294 18386951 -10617705 + LSU-rRNA_Dme rRNA rRNA 218 873 -3027 1 725 2203 179 6 10 chrUextra 18387051 18387529 -10617127 + SAR_DM Satellite Satellite 1 614 -641 1 725 992 101 0 0 chrUextra 18387529 18387687 -10616969 - ARS406_DM Unknown Unknown -195 158 1 1 725 2203 179 6 10 chrUextra 18387687 18387741 -10616915 + SAR_DM Satellite Satellite 615 686 -569 1 725 21 89 0 0 chrUextra 18388240 18388296 -10616360 + AT_rich Low_complexity Low_complexity 1 56 0 1 725 1915 5 0 0 chrUextra 18388315 18388535 -10616121 - SSU-rRNA_Dme rRNA rRNA 0 1995 1776 1 725 2356 92 12 22 chrUextra 18388641 18389327 -10615329 + DMSAT6 Satellite Satellite 1 678 -151 1 725 5802 4 1 1 chrUextra 18390219 18390911 -10613745 - G_DM LINE Jockey -2037 2309 1618 1 725 2344 144 7 0 chrUextra 18391011 18391415 -10613241 + HMSBEAGLE_I LTR Gypsy 2048 2454 -4075 1 725 1311 196 25 11 chrUextra 18391419 18391703 -10612953 + HMSBEAGLE_I LTR Gypsy 2422 2709 -3820 1 725 5779 10 0 0 chrUextra 18391803 18392495 -10612161 - Invader2_I LTR Gypsy -528 4064 3373 1 725 4979 30 26 4 chrUextra 18392595 18393287 -10611369 - PROTOP DNA P -3470 1010 304 1 725 5252 0 0 0 chrUextra 18393387 18393982 -10610674 - Invader6_I LTR Gypsy -3504 595 1 1 725 806 0 0 0 chrUextra 18393982 18394079 -10610577 - Invader6_LTR LTR Gypsy 0 393 297 1 725 5851 16 1 1 chrUextra 18394179 18394871 -10609785 - Gypsy12_I LTR Gypsy -762 4784 4093 1 725 5820 14 0 0 chrUextra 18394971 18395663 -10608993 - DMRT1B LINE R1 -1559 3624 2933 1 725 990 182 33 14 chrUextra 18395763 18396455 -10608201 - SAR_DM Satellite Satellite -686 704 1 1 725 6006 1 0 1 chrUextra 18396555 18397247 -10607409 + SSU-rRNA_Dme rRNA rRNA 473 1163 -832 1 725 192 40 0 0 chrUextra 18397372 18397397 -10607259 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 725 491 208 8 16 chrUextra 18397397 18397519 -10607137 + HETRP_DM Satellite Satellite 1549 1669 -203 1 725 662 200 6 19 chrUextra 18397682 18397840 -10606816 + HETRP_DM Satellite Satellite 1529 1684 -188 1 725 388 121 0 0 chrUextra 18397964 18398022 -10606634 + HETRP_DM Satellite Satellite 1529 1586 -286 1 725 640 116 0 9 chrUextra 18398139 18398252 -10606404 - ARS406_DM Unknown Unknown -241 112 1 1 725 2838 179 8 10 chrUextra 18398158 18398828 -10605828 + SAR_DM Satellite Satellite 195 862 -610 1 725 5424 40 9 0 chrUextra 18398931 18399623 -10605033 - R1_DM LINE R1 -1982 3374 2677 1 725 217 122 82 0 chrUextra 18400361 18400410 -10604246 + (CAGA)n Simple_repeat Simple_repeat 2 54 0 1 725 3049 132 4 9 chrUextra 18400531 18401064 -10603592 + TAHRE LINE telomeric 9931 10460 -3 1 725 349 236 0 136 chrUextra 18401060 18401207 -10603449 + TAHRE LINE telomeric 7219 7345 -3118 1 725 34 24 0 0 chrUextra 18401406 18401447 -10603209 + AT_rich Low_complexity Low_complexity 1 41 0 1 725 5864 4 0 0 chrUextra 18402099 18402791 -10601865 + DMRT1B LINE R1 271 962 -4221 1 725 5892 3 1 0 chrUextra 18402892 18403583 -10601073 - R1_DM LINE R1 -2312 3044 2353 1 725 5847 7 0 0 chrUextra 18403683 18404375 -10600281 - DOC2_DM LINE Jockey -1289 3504 2813 1 725 3561 32 0 4 chrUextra 18404475 18404938 -10599718 + CIRCE LINE Composite 4520 4980 -1376 1 725 324 26 0 0 chrUextra 18405128 18405167 -10599489 - R1_DM LINE R1 -4037 1319 1281 1 725 21 0 0 0 chrUextra 18405711 18405732 -10598924 + AT_rich Low_complexity Low_complexity 1 21 0 1 725 1273 19 0 18 chrUextra 18406554 18406719 -10597937 - NTS_DM Other Other -78 162 1 1 725 1489 6 0 0 chrUextra 18406851 18407030 -10597626 - NTS_DM Other Other -61 179 1 1 725 1843 4 17 13 chrUextra 18407030 18407269 -10597387 - NTS_DM Other Other 0 240 1 1 725 1806 13 17 13 chrUextra 18407269 18407508 -10597148 - NTS_DM Other Other 0 240 1 1 725 5929 0 1 4 chrUextra 18407643 18408335 -10596321 - SSU-rRNA_Dme rRNA rRNA -668 1327 638 1 725 239 261 11 0 chrUextra 18409230 18409318 -10595338 + ROVER-I_DM LTR Gypsy 1446 1534 -5050 1 725 4541 39 0 0 chrUextra 18409330 18409919 -10594737 - PROTOP_A DNA P 0 1105 517 1 725 2097 61 17 0 chrUextra 18410019 18410316 -10594340 - Baggins1 LINE LOA -361 5092 4791 1 725 697 55 0 109 chrUextra 18411614 18411816 -10592840 + (CAAGA)n Simple_repeat Simple_repeat 1 180 0 1 725 1620 15 0 0 chrUextra 18411816 18412295 -10592361 + (ACATG)n Simple_repeat Simple_repeat 1 479 0 1 725 917 77 6 18 chrUextra 18412395 18413087 -10591569 + RSP Satellite Satellite 1 683 0 1 725 5606 1 1 1 chrUextra 18413187 18413879 -10590777 + Copia_I LTR Copia 2313 3004 -1589 1 725 5434 2 0 2 chrUextra 18414049 18414671 -10589985 + SSU-rRNA_Dme rRNA rRNA 1 621 -1374 1 725 4928 84 3 13 chrUextra 18414773 18415463 -10589193 - Gypsy12_I LTR Gypsy -99 5447 4765 1 725 698 88 9 0 chrUextra 18415563 18415677 -10588979 - ARS406_DM Unknown Unknown -230 123 9 1 725 2928 161 25 13 chrUextra 18415579 18416252 -10588404 + SAR_DM Satellite Satellite 180 860 -612 1 725 1769 25 8 4 chrUextra 18416355 18416593 -10588063 + G_DM LINE Jockey 4108 4346 0 1 725 2610 71 18 3 chrUextra 18416610 18416990 -10587666 + PROTOP_A DNA P 720 1105 0 1 725 573 14 0 0 chrUextra 18417147 18417219 -10587437 + QUASIMODO_LTR LTR Gypsy 290 361 -297 1 725 579 11 118 8 chrUextra 18417220 18417586 -10587070 + (TA)n Simple_repeat Simple_repeat 1 406 0 1 725 21 0 0 0 chrUextra 18417586 18417607 -10587049 + AT_rich Low_complexity Low_complexity 1 21 0 1 725 551 0 124 12 chrUextra 18417607 18417768 -10586888 + (TA)n Simple_repeat Simple_repeat 2 180 0 1 725 575 28 0 0 chrUextra 18417768 18417839 -10586817 + DIVER_LTR LTR Pao 1 71 -153 1 725 5570 16 0 0 chrUextra 18417939 18418631 -10586025 - IDEFIX_I LTR Gypsy -4637 991 300 1 725 757 40 10 0 chrUextra 18418844 18418945 -10585711 - DNAREP1_DM LINE Penelope 0 594 493 1 725 2196 11 0 78 chrUextra 18418946 18419253 -10585403 + DM176_LTR LTR Gypsy 1 283 -224 1 725 1314 24 24 0 chrUextra 18419254 18419423 -10585233 + DM176_LTR LTR Gypsy 251 423 -84 1 725 365 143 0 0 chrUextra 18419558 18419615 -10585041 - DNAREP1_DM LINE Penelope -479 115 59 1 725 2386 43 3 5 chrUextra 18419615 18419940 -10584716 + Gypsy6A_LTR LTR Gypsy 1 408 -12 1 725 2338 11 4 0 chrUextra 18419940 18420215 -10584441 + Gypsy12_LTR LTR Gypsy 1 276 -2060 1 725 3001 49 98 4 chrUextra 18420315 18421007 -10583649 - IDEFIX_I LTR Gypsy -2652 2976 2220 1 725 5883 6 0 3 chrUextra 18421107 18421799 -10582857 - G_DM LINE Jockey -980 3366 2677 1 725 1494 303 38 6 chrUextra 18421899 18422590 -10582066 + MICROPIA_I LTR Gypsy 2425 3137 -1339 1 725 5979 3 0 0 chrUextra 18422691 18423383 -10581273 - R1_DM LINE R1 -1563 3793 3102 1 725 2686 171 13 64 chrUextra 18423483 18424175 -10580481 - SAR_DM Satellite Satellite -382 1090 434 1 725 2815 186 18 9 chrUextra 18424281 18424952 -10579704 - SAR_DM Satellite Satellite -514 958 282 1 725 721 29 9 29 chrUextra 18425067 18425172 -10579484 + (TAA)n Simple_repeat Simple_repeat 3 105 0 1 725 1371 145 93 13 chrUextra 18425174 18425474 -10579182 + MDG1_LTR LTR Gypsy 89 412 -30 1 725 922 262 43 7 chrUextra 18425475 18425752 -10578904 + BS2 LINE Jockey 2721 3007 -1714 1 725 2917 181 10 17 chrUextra 18425859 18426551 -10578105 - SAR_DM Satellite Satellite -490 982 296 1 725 5919 1 0 0 chrUextra 18426651 18427343 -10577313 - ROO_I LTR Pao -5777 2479 1788 1 725 1903 14 64 4 chrUextra 18427443 18427724 -10576932 + STALKER4_I LTR Gypsy 6095 6392 -138 1 725 2636 53 1 19 chrUextra 18427719 18428096 -10576560 + STALKER4_LTR LTR Gypsy 64 399 -3 1 725 2856 168 9 31 chrUextra 18428235 18428915 -10575741 + SAR_DM Satellite Satellite 439 1103 -369 1 725 918 0 0 0 chrUextra 18429617 18429719 -10574937 + (CAAAA)n Simple_repeat Simple_repeat 4 105 0 1 725 1461 68 10 0 chrUextra 18429819 18430026 -10574630 - R1_DM LINE R1 -5147 209 1 1 725 934 35 0 0 chrUextra 18430059 18430173 -10574483 - R1_DM LINE R1 0 5356 5243 1 725 2729 32 3 0 chrUextra 18430170 18430511 -10574145 - R1_DM LINE R1 -290 5066 4725 1 725 3240 3 10 0 chrUextra 18430611 18431002 -10573654 - DMRT1A LINE R1 -4044 1139 745 1 725 1620 0 0 0 chrUextra 18431002 18431303 -10573353 + (TTGTG)n Simple_repeat Simple_repeat 1 301 0 1 725 5107 35 51 13 chrUextra 18431405 18432095 -10572561 + DOC3_DM LINE Jockey 2819 3534 -1206 1 725 5718 14 1 0 chrUextra 18432195 18432887 -10571769 + FW_DM LINE Jockey 2469 3161 -1531 1 725 5929 0 1 4 chrUextra 18432987 18433679 -10570977 - SSU-rRNA_Dme rRNA rRNA -405 1590 901 1 725 1739 224 49 20 chrUextra 18433780 18434273 -10570383 - Gypsy12_LTR LTR Gypsy -1829 507 1 1 725 1458 80 0 0 chrUextra 18434272 18434471 -10570185 - Gypsy12_I LTR Gypsy 0 5546 5348 1 725 590 312 35 35 chrUextra 18434944 18435259 -10569397 - Gypsy3_I LTR Gypsy -4631 1546 1232 1 725 5921 0 0 3 chrUextra 18435363 18436055 -10568601 + ROO_I LTR Pao 5074 5763 -2493 1 725 1062 61 0 0 chrUextra 18436164 18436311 -10568345 + ARS406_DM Unknown Unknown 43 189 -164 1 725 3189 269 64 28 chrUextra 18436214 18437616 -10567040 - SAR_DM Satellite Satellite -208 1452 1 1 725 877 70 0 0 chrUextra 18437510 18437639 -10567017 + ARS406_DM Unknown Unknown 1 129 -224 1 725 1369 300 26 17 chrUextra 18437739 18438393 -10566263 + MICROPIA_I LTR Gypsy 2398 3045 -1431 1 725 5470 35 12 0 chrUextra 18438531 18439222 -10565434 - IDEFIX_I LTR Gypsy -3520 2108 1410 1 725 656 288 131 14 chrUextra 18439324 18439683 -10564973 + Gypsy7_I LTR Gypsy 1267 1667 -3317 1 725 1314 29 6 39 chrUextra 18439709 18439891 -10564765 - G5A_DM LINE Jockey -3 2838 2663 1 725 295 317 0 0 chrUextra 18439892 18440012 -10564644 + Gypsy7_I LTR Gypsy 1239 1358 -3626 1 725 5069 53 15 3 chrUextra 18440115 18440794 -10563862 - R1_DM LINE R1 -4561 795 109 1 725 5572 20 26 3 chrUextra 18440907 18441599 -10563057 - DMCR1A LINE CR1 -916 3554 2847 1 725 2819 180 15 15 chrUextra 18441704 18442391 -10562265 - SAR_DM Satellite Satellite -577 895 209 1 725 5873 3 0 0 chrUextra 18442491 18443183 -10561473 + FW_DM LINE Jockey 2586 3277 -1415 1 725 2657 21 21 3 chrUextra 18443635 18443973 -10560683 + PROTOP_A DNA P 419 762 -343 1 725 3164 179 9 7 chrUextra 18444084 18444767 -10559889 + SAR_DM Satellite Satellite 167 850 -622 1 725 3671 106 80 7 chrUextra 18444867 18445426 -10559230 + Gypsy12_I LTR Gypsy 1316 1915 -3631 1 725 1213 0 0 0 chrUextra 18445426 18445559 -10559097 + TABOR_LTR LTR Gypsy 1 133 -373 1 725 6099 13 1 0 chrUextra 18445659 18446351 -10558305 - DM1731_I LTR Copia -2684 1292 600 1 725 6141 4 0 0 chrUextra 18446451 18447143 -10557513 + ROO_I LTR Pao 5519 6210 -2046 1 725 6018 0 0 0 chrUextra 18447243 18447935 -10556721 + QUASIMODO_I LTR Gypsy 3824 4515 -1545 1 725 5205 27 14 8 chrUextra 18448035 18448676 -10555980 + NINJA_I LTR Pao 2577 3221 -2790 1 725 494 0 0 0 chrUextra 18448671 18448727 -10555929 + NINJA_I LTR Pao 3439 3494 -2517 1 725 970 67 7 15 chrUextra 18448827 18448964 -10555692 - BATUMI_I LTR Pao -7827 136 1 1 725 2121 48 3 30 chrUextra 18448964 18449266 -10555390 - BATUMI_I LTR Pao -679 7284 6991 1 725 21 89 0 0 chrUextra 18449290 18449346 -10555310 + AT_rich Low_complexity Low_complexity 1 56 0 1 725 3099 186 16 9 chrUextra 18449619 18450308 -10554348 + SAR_DM Satellite Satellite 256 949 -523 1 725 636 20 39 39 chrUextra 18450411 18450513 -10554143 + NTS_DM Other Other 139 240 0 1 725 1824 21 17 17 chrUextra 18450513 18450753 -10553903 + NTS_DM Other Other 1 240 0 1 725 1835 17 17 17 chrUextra 18450753 18450993 -10553663 + NTS_DM Other Other 1 240 0 1 725 984 9 0 0 chrUextra 18450993 18451103 -10553553 + NTS_DM Other Other 1 110 -130 1 725 3043 189 9 9 chrUextra 18451204 18451889 -10552767 - SAR_DM Satellite Satellite -593 879 195 1 725 1722 18 18 18 chrUextra 18451995 18452224 -10552432 + NTS_DM Other Other 12 240 0 1 725 1930 4 17 13 chrUextra 18452224 18452463 -10552193 + NTS_DM Other Other 1 240 0 1 725 1813 5 13 13 chrUextra 18452463 18452687 -10551969 + NTS_DM Other Other 1 224 -16 1 725 1707 18 18 18 chrUextra 18452787 18453015 -10551641 + NTS_DM Other Other 13 240 0 1 725 1813 21 17 17 chrUextra 18453015 18453255 -10551401 + NTS_DM Other Other 1 240 0 1 725 1685 18 13 22 chrUextra 18453255 18453479 -10551177 + NTS_DM Other Other 1 222 -18 1 725 2450 98 19 45 chrUextra 18453579 18454267 -10550389 - DMSAT6 Satellite Satellite -82 669 1 1 725 5808 2 2 0 chrUextra 18454371 18455010 -10549646 - LSU-rRNA_Dme rRNA rRNA -621 3279 2640 1 725 441 19 0 18 chrUextra 18455008 18455063 -10549593 - R1_DM LINE R1 0 5356 5303 1 725 6097 1 0 0 chrUextra 18455163 18455855 -10548801 - LSU-rRNA_Dme rRNA rRNA -2984 916 225 1 725 6120 0 0 1 chrUextra 18455955 18456647 -10548009 + ROO_I LTR Pao 3755 4445 -3811 1 725 2656 59 3 0 chrUextra 18456748 18457102 -10547554 + XDMR Unknown Unknown 7 361 0 1 725 2414 71 3 0 chrUextra 18457102 18457439 -10547217 + XDMR Unknown Unknown 1 338 -23 1 725 907 9 0 27 chrUextra 18457543 18457655 -10547001 + NTS_DM Other Other 25 133 -107 1 725 1304 18 0 6 chrUextra 18457655 18457820 -10546836 + NTS_DM Other Other 38 201 -39 1 725 907 9 0 27 chrUextra 18457872 18457984 -10546672 + NTS_DM Other Other 25 133 -107 1 725 1486 20 20 20 chrUextra 18457984 18458187 -10546469 + NTS_DM Other Other 38 240 0 1 725 385 23 0 0 chrUextra 18458187 18458231 -10546425 + NTS_DM Other Other 1 44 -196 1 725 5684 17 3 0 chrUextra 18458331 18459023 -10545633 + PROTOP_A DNA P 163 856 -249 1 725 6059 1 1 3 chrUextra 18459123 18459815 -10544841 - MICROPIA_I LTR Gypsy -5 4471 3781 1 725 5502 6 1 38 chrUextra 18459918 18460607 -10544049 + ROVER-I_DM LTR Gypsy 575 1238 -5346 1 725 3005 188 19 23 chrUextra 18460707 18461399 -10543257 - SAR_DM Satellite Satellite -641 689 1 1 725 5884 4 3 0 chrUextra 18461499 18462191 -10542465 + IDEFIX_I LTR Gypsy 4085 4778 -850 1 725 5043 15 0 55 chrUextra 18462291 18462983 -10541673 + DM176_I LTR Gypsy 302 955 -5465 1 725 34 24 0 0 chrUextra 18463590 18463631 -10541025 + AT_rich Low_complexity Low_complexity 1 41 0 1 725 6314 4 0 0 chrUextra 18463875 18464567 -10540089 + Invader1_I LTR Gypsy 1679 2370 -816 1 725 4217 2 0 0 chrUextra 18464667 18465129 -10539527 - LSU-rRNA_Dme rRNA rRNA -1651 2249 1788 1 725 1575 0 11 5 chrUextra 18465173 18465359 -10539297 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1602 1 725 2862 177 14 25 chrUextra 18465459 18466125 -10538531 + SAR_DM Satellite Satellite 462 1119 -353 1 725 419 184 18 27 chrUextra 18466039 18466151 -10538505 - XDMR_DM Unknown Unknown 0 360 250 1 725 6331 0 0 0 chrUextra 18466251 18466943 -10537713 - DIVER_I LTR Pao -947 4696 4005 1 725 311 0 0 0 chrUextra 18467051 18467087 -10537569 - MAX_I LTR Pao -6959 955 920 1 725 216 0 0 0 chrUextra 18467131 18467155 -10537501 + (A)n Simple_repeat Simple_repeat 1 24 0 1 725 1181 84 381 0 chrUextra 18467217 18467477 -10537179 - MAX_I LTR Pao -6999 915 557 1 725 6154 0 0 1 chrUextra 18467835 18468527 -10536129 + LSU-rRNA_Dme rRNA rRNA 498 1188 -2712 1 725 5895 0 17 1 chrUextra 18468627 18469319 -10535337 + ROO_I LTR Pao 182 884 -7372 1 725 5909 16 1 0 chrUextra 18469419 18470111 -10534545 + BLOOD_I LTR Gypsy 2887 3579 -3034 1 725 2518 174 7 10 chrUextra 18470211 18470748 -10533908 - SAR_DM Satellite Satellite -447 688 66 1 725 802 50 0 0 chrUextra 18470748 18470848 -10533808 + ARS406_DM Unknown Unknown 90 189 -164 1 725 2518 174 7 10 chrUextra 18470848 18470902 -10533754 - SAR_DM Satellite Satellite -447 65 1 1 725 6019 1 0 1 chrUextra 18471003 18471695 -10532961 + ROO_I LTR Pao 3444 4134 -4122 1 725 1463 243 73 19 chrUextra 18471795 18472261 -10532395 + TAHRE LINE telomeric 9615 10105 -358 1 725 586 140 18 0 chrUextra 18472248 18472362 -10532294 + HETA LINE telomeric 5795 5910 -171 1 725 28 0 0 0 chrUextra 18472385 18472413 -10532243 + AT_rich Low_complexity Low_complexity 1 28 0 1 725 2251 31 0 33 chrUextra 18472587 18472886 -10531770 - QUASIMODO_I LTR Gypsy -2053 4007 3719 1 725 3021 22 3 13 chrUextra 18472907 18473279 -10531377 - QUASIMODO_I LTR Gypsy -2643 3417 3050 1 725 6218 6 0 0 chrUextra 18473379 18474071 -10530585 + R1_DM LINE R1 4160 4851 -505 1 725 367 352 40 52 chrUextra 18474173 18474691 -10529965 + Copia2_I LTR Copia 146 672 -3490 1 725 6216 3 0 1 chrUextra 18474963 18475655 -10529001 + R1_DM LINE R1 4575 5265 -91 1 725 6060 3 1 0 chrUextra 18475755 18476447 -10528209 - DM176_I LTR Gypsy -951 5469 4777 1 725 6324 0 3 0 chrUextra 18476547 18477239 -10527417 - LSU-rRNA_Dme rRNA rRNA -313 3587 2894 1 725 5566 49 3 4 chrUextra 18477339 18478031 -10526625 - MAX_I LTR Pao -5096 2818 2128 1 725 5469 2 2 0 chrUextra 18478131 18478730 -10525926 + LSU-rRNA_Dme rRNA rRNA 3301 3900 0 1 725 3028 182 9 9 chrUextra 18478923 18479593 -10525063 - SAR_DM Satellite Satellite -611 861 192 1 725 748 102 0 8 chrUextra 18479496 18479615 -10525041 + ARS406_DM Unknown Unknown 1 118 -235 1 725 4838 119 0 0 chrUextra 18479716 18480407 -10524249 - HMSBEAGLE_I LTR Gypsy -1494 5035 4345 1 90 2458 97 22 13 chrUextra 18480507 18481199 -10523457 - DMSAT6 Satellite Satellite -102 698 1 1 726 2346 114 14 17 chrUextra 18482091 18482586 -10522070 - DOC2_DM LINE Jockey -4202 591 6 1 726 638 12 0 0 chrUextra 18482697 18482783 -10521873 - DOC2_DM LINE Jockey 0 4793 4708 1 726 6219 3 0 0 chrUextra 18482883 18483575 -10521081 - R1_DM LINE R1 -1839 3517 2826 1 726 1844 0 18 13 chrUextra 18483675 18483904 -10520752 + NTS_DM Other Other 11 240 0 1 726 1918 4 17 13 chrUextra 18483904 18484143 -10520513 + NTS_DM Other Other 1 240 0 1 726 1813 5 13 13 chrUextra 18484143 18484367 -10520289 + NTS_DM Other Other 1 224 -16 1 726 32 0 0 0 chrUextra 18484594 18484626 -10520030 + AT_rich Low_complexity Low_complexity 1 32 0 1 726 3641 2 2 0 chrUextra 18484758 18485159 -10519497 + SSU-rRNA_Dme rRNA rRNA 1 402 -1593 1 726 24 53 0 0 chrUextra 18485834 18485872 -10518784 + AT_rich Low_complexity Low_complexity 1 38 0 1 726 1799 187 4 3 chrUextra 18486051 18486743 -10517913 - SAR_DM Satellite Satellite -627 692 1 1 726 2804 192 16 22 chrUextra 18486843 18487535 -10517121 + SAR_DM Satellite Satellite 470 1157 -315 1 726 3364 170 9 9 chrUextra 18487637 18488326 -10516330 - SAR_DM Satellite Satellite -589 883 195 1 726 5575 12 0 16 chrUextra 18488427 18489119 -10515537 + Invader2_I LTR Gypsy 3880 4560 -32 1 726 3954 50 66 0 chrUextra 18489220 18489764 -10514892 - MDG1_I LTR Gypsy -4883 1713 1134 1 726 350 149 0 0 chrUextra 18489836 18489910 -10514746 - MDG1_I LTR Gypsy -5462 1134 1061 1 726 6165 3 1 1 chrUextra 18490010 18490701 -10513955 - R1_DM LINE R1 -3570 1786 1096 1 726 423 106 45 0 chrUextra 18490801 18490867 -10513789 + NTS_DM Other Other 22 90 -150 1 726 28 48 0 0 chrUextra 18491140 18491182 -10513474 + AT_rich Low_complexity Low_complexity 1 42 0 1 726 6301 1 0 0 chrUextra 18491592 18492283 -10512373 + DOC LINE Jockey 3710 4400 -325 1 726 1251 343 19 16 chrUextra 18492385 18493072 -10511584 + Copia2_I LTR Copia 2597 3285 -877 1 726 860 95 0 0 chrUextra 18493174 18493300 -10511356 - ARS406_DM Unknown Unknown -227 126 1 1 726 3032 180 9 8 chrUextra 18493204 18493864 -10510792 + SAR_DM Satellite Satellite 192 852 -620 1 726 378 100 13 79 chrUextra 18493965 18494041 -10510615 - Gypsy12_LTR LTR Gypsy -2265 71 1 1 726 3111 69 79 2 chrUextra 18494040 18494645 -10510011 - Gypsy12_I LTR Gypsy 0 5546 4895 1 726 3021 3 0 6 chrUextra 18494756 18495101 -10509555 - Copia_I LTR Copia -4250 343 1 1 726 239 0 0 0 chrUextra 18495101 18495135 -10509521 - Copia_LTR LTR Copia 0 276 243 1 726 2334 11 0 0 chrUextra 18495135 18495411 -10509245 - Copia_LTR LTR Copia 0 276 1 1 726 324 0 0 0 chrUextra 18495411 18495447 -10509209 + (CTATT)n Simple_repeat Simple_repeat 2 37 0 1 726 433 32 0 16 chrUextra 18495547 18495611 -10509045 + NTS_DM Other Other 139 201 -39 1 726 21 57 0 0 chrUextra 18495611 18495646 -10509010 + AT_rich Low_complexity Low_complexity 1 35 0 1 726 840 9 9 36 chrUextra 18495672 18495784 -10508872 + NTS_DM Other Other 25 133 -107 1 726 851 0 0 0 chrUextra 18495784 18495880 -10508776 + NTS_DM Other Other 38 133 -107 1 726 1472 20 20 20 chrUextra 18495880 18496083 -10508573 + NTS_DM Other Other 38 240 0 1 726 1296 19 0 0 chrUextra 18496083 18496237 -10508419 + NTS_DM Other Other 1 154 -86 1 726 3115 179 5 12 chrUextra 18496338 18497010 -10507646 - SAR_DM Satellite Satellite -611 861 195 1 726 652 107 0 35 chrUextra 18496913 18497029 -10507627 + ARS406_DM Unknown Unknown 1 112 -241 1 726 6152 6 0 3 chrUextra 18497129 18497820 -10506836 + FW_DM LINE Jockey 1780 2468 -2224 1 726 5506 32 16 3 chrUextra 18497920 18498611 -10506045 + PROTOP_A DNA P 354 1053 -52 1 726 375 63 56 112 chrUextra 18498714 18498803 -10505853 - Gypsy_LTR LTR Gypsy -252 230 147 1 726 2452 166 8 8 chrUextra 18499509 18500000 -10504656 - SAR_DM Satellite Satellite -569 903 413 1 726 918 182 5 0 chrUextra 18500000 18500187 -10504469 - SAR_DM Satellite Satellite -701 771 584 1 726 5748 15 4 4 chrUextra 18500293 18500984 -10503672 + PROTOP_A DNA P 57 747 -358 1 726 4049 69 18 0 chrUextra 18501084 18501696 -10502960 + BS3_DM LINE Jockey 326 1044 -746 1 726 576 146 0 0 chrUextra 18501686 18501775 -10502881 + BS3_DM LINE Jockey 1311 1399 -391 1 726 6074 4 0 1 chrUextra 18501875 18502566 -10502090 + DOC LINE Jockey 1515 2204 -2521 1 726 907 9 0 27 chrUextra 18502679 18502791 -10501865 + NTS_DM Other Other 25 133 -107 1 726 1304 18 0 6 chrUextra 18502791 18502956 -10501700 + NTS_DM Other Other 38 201 -39 1 726 889 18 0 27 chrUextra 18503008 18503120 -10501536 + NTS_DM Other Other 25 133 -107 1 726 1304 18 0 6 chrUextra 18503120 18503285 -10501371 + NTS_DM Other Other 38 201 -39 1 726 21 57 0 0 chrUextra 18503285 18503320 -10501336 + AT_rich Low_complexity Low_complexity 1 35 0 1 726 3047 173 0 0 chrUextra 18503457 18503984 -10500672 + HETA LINE telomeric 2917 3443 -2638 1 726 935 161 6 6 chrUextra 18503986 18504148 -10500508 + HETA LINE telomeric 4469 4630 -1451 1 726 3369 175 6 7 chrUextra 18504253 18504939 -10499717 + SAR_DM Satellite Satellite 246 930 -542 1 726 5451 29 6 13 chrUextra 18505039 18505730 -10498926 + Gypsy12_LTR LTR Gypsy 1401 2086 -250 1 726 2192 23 0 4 chrUextra 18506263 18506521 -10498135 - QUASIMODO_LTR LTR Gypsy 0 658 402 1 726 5249 2 2 2 chrUextra 18507524 18508103 -10496553 - SSU-rRNA_Dme rRNA rRNA 0 1995 1417 1 726 3315 170 9 10 chrUextra 18508203 18508894 -10495762 - SAR_DM Satellite Satellite -399 1073 384 1 726 23 0 0 0 chrUextra 18509023 18509046 -10495610 + AT_rich Low_complexity Low_complexity 1 23 0 1 726 2886 129 22 14 chrUextra 18509174 18509683 -10494973 - Stalker2_I LTR Gypsy -6509 893 381 1 726 34 24 0 0 chrUextra 18509991 18510032 -10494624 + AT_rich Low_complexity Low_complexity 1 41 0 1 726 21 95 0 0 chrUextra 18510245 18510308 -10494348 + AT_rich Low_complexity Low_complexity 1 63 0 1 726 1375 13 0 0 chrUextra 18510320 18510476 -10494180 + LSU-rRNA_Dme rRNA rRNA 1 156 -3744 1 726 2826 196 17 22 chrUextra 18510581 18511267 -10493389 - SAR_DM Satellite Satellite -658 682 1 1 726 6201 1 1 3 chrUextra 18511367 18512058 -10492598 + SSU-rRNA_Dme rRNA rRNA 537 1226 -769 1 726 6077 0 0 0 chrUextra 18512158 18512849 -10491807 - ROO_I LTR Pao -6957 1299 609 1 726 411 0 0 0 chrUextra 18512949 18512994 -10491662 - NTS_DM Other Other -158 82 38 1 726 840 9 9 36 chrUextra 18512994 18513106 -10491550 - NTS_DM Other Other -107 133 25 1 726 21 57 0 0 chrUextra 18513132 18513167 -10491489 + AT_rich Low_complexity Low_complexity 1 35 0 1 726 1304 18 0 6 chrUextra 18513167 18513332 -10491324 - NTS_DM Other Other -39 201 38 1 726 907 9 0 27 chrUextra 18513332 18513444 -10491212 - NTS_DM Other Other -107 133 25 1 726 1015 28 7 7 chrUextra 18513496 18513640 -10491016 - NTS_DM Other Other -39 201 58 1 726 2593 180 101 39 chrUextra 18513758 18514429 -10490227 + TAHRE LINE telomeric 7071 7783 -2680 1 726 1934 0 5 0 chrUextra 18514531 18514753 -10489903 - BLASTOPIA_I LTR Gypsy -4258 223 1 1 726 2192 19 7 11 chrUextra 18514753 18515025 -10489631 - BLASTOPIA_LTR LTR Gypsy 0 275 5 1 726 1128 124 0 0 chrUextra 18515025 18515203 -10489453 + (CATA)n Simple_repeat Simple_repeat 3 180 0 1 726 6033 1 7 0 chrUextra 18515322 18516013 -10488643 + DM176_I LTR Gypsy 4771 5466 -954 1 726 1184 65 0 0 chrUextra 18516113 18516266 -10488390 - Gypsy12_I LTR Gypsy -4031 1515 1363 1 726 2437 108 2 47 chrUextra 18516268 18516802 -10487854 - Gypsy12_I LTR Gypsy -4751 795 231 1 726 3036 251 47 22 chrUextra 18516909 18518386 -10486270 - SAR_DM Satellite Satellite -255 1513 1 1 726 3129 0 3 3 chrUextra 18518486 18518846 -10485810 - R1_DM LINE R1 -4145 1211 852 1 726 973 18 0 0 chrUextra 18518843 18518952 -10485704 - LSU-rRNA_Dme rRNA rRNA -1214 2686 2578 1 726 2078 0 0 0 chrUextra 18518948 18519177 -10485479 - R2_DM LINE R2 -4 3603 3375 1 726 636 14 14 0 chrUextra 18519277 18519351 -10485305 - NTS_DM Other Other -165 75 1 1 726 1472 20 20 20 chrUextra 18519351 18519554 -10485102 - NTS_DM Other Other 0 240 38 1 726 851 0 0 0 chrUextra 18519554 18519650 -10485006 - NTS_DM Other Other -107 133 38 1 726 870 9 9 27 chrUextra 18519650 18519761 -10484895 - NTS_DM Other Other -107 133 25 1 726 21 57 0 0 chrUextra 18519787 18519822 -10484834 + AT_rich Low_complexity Low_complexity 1 35 0 1 726 1084 21 0 7 chrUextra 18519822 18519968 -10484688 - NTS_DM Other Other -39 201 57 1 726 2074 42 66 0 chrUextra 18520068 18520354 -10484302 + PROTOP DNA P 252 556 -3924 1 726 2126 46 4 0 chrUextra 18520351 18520611 -10484045 + PROTOP DNA P 4220 4480 0 1 726 2833 62 5 19 chrUextra 18520860 18521239 -10483417 + Baggins1 LINE LOA 4818 5191 -262 1 726 992 288 47 32 chrUextra 18521779 18522336 -10482320 + BLOOD_I LTR Gypsy 1772 2336 -4277 1 726 5986 17 0 0 chrUextra 18522441 18523132 -10481524 + FW_DM LINE Jockey 2282 2972 -1720 1 726 5949 23 3 0 chrUextra 18523232 18523923 -10480733 + FW_DM LINE Jockey 3240 3932 -760 1 726 3070 160 9 56 chrUextra 18524031 18524713 -10479943 - SAR_DM Satellite Satellite -416 1056 407 1 726 28 48 0 0 chrUextra 18524859 18524901 -10479755 + AT_rich Low_complexity Low_complexity 1 42 0 1 726 32 0 0 0 chrUextra 18525229 18525261 -10479395 + AT_rich Low_complexity Low_complexity 1 32 0 1 726 1010 0 0 0 chrUextra 18525394 18525505 -10479151 + SSU-rRNA_Dme rRNA rRNA 1 111 -1884 1 726 5699 26 0 1 chrUextra 18525606 18526295 -10478361 + STALKER4_I LTR Gypsy 2449 3136 -3394 1 726 28 48 0 0 chrUextra 18527501 18527543 -10477113 + AT_rich Low_complexity Low_complexity 1 42 0 1 726 329 177 32 0 chrUextra 18527816 18527878 -10476778 - NTS_DM Other Other -150 90 27 1 726 360 45 0 0 chrUextra 18527979 18528023 -10476633 - R1_DM LINE R1 -5312 44 1 1 726 5261 26 2 0 chrUextra 18528056 18528669 -10475987 - R1_DM LINE R1 0 5356 4743 1 726 5481 1 1 68 chrUextra 18528769 18529460 -10475196 + LSU-rRNA_Dme rRNA rRNA 1678 2322 -1578 1 726 28 48 0 0 chrUextra 18529874 18529916 -10474740 + AT_rich Low_complexity Low_complexity 1 42 0 1 726 377 129 32 0 chrUextra 18530189 18530251 -10474405 - NTS_DM Other Other -150 90 27 1 726 6193 4 7 0 chrUextra 18530351 18531042 -10473614 - DOC LINE Jockey -1005 3720 3025 1 726 5169 61 32 0 chrUextra 18531142 18531833 -10472823 - IDEFIX_I LTR Gypsy -4076 1552 840 1 726 5347 65 3 3 chrUextra 18531933 18532624 -10472032 - R1_DM LINE R1 -4658 698 8 1 726 752 12 0 0 chrUextra 18532726 18532811 -10471845 - R1_DM LINE R1 -865 4491 4407 1 726 5028 15 2 2 chrUextra 18532831 18533414 -10471242 - R1_DM LINE R1 -1074 4282 3700 1 726 857 62 9 0 chrUextra 18533515 18533628 -10471028 - R1_DM LINE R1 -5242 114 1 1 726 988 35 0 0 chrUextra 18533661 18533775 -10470881 - R1_DM LINE R1 0 5356 5243 1 726 3701 23 2 0 chrUextra 18533772 18534206 -10470450 - R1_DM LINE R1 -290 5066 4632 1 726 344 265 114 96 chrUextra 18534329 18534609 -10470047 - Invader1_LTR LTR Gypsy -55 368 84 1 726 870 171 119 11 chrUextra 18534818 18534995 -10469661 + DMLTR5 LTR Gypsy 44 239 -27 1 726 735 0 12 0 chrUextra 18535097 18535181 -10469475 - SSU-rRNA_Dme rRNA rRNA -1910 85 1 1 726 32 0 0 0 chrUextra 18535313 18535345 -10469311 + AT_rich Low_complexity Low_complexity 1 32 0 1 726 28 48 0 0 chrUextra 18535673 18535715 -10468941 + AT_rich Low_complexity Low_complexity 1 42 0 1 726 377 247 45 0 chrUextra 18535889 18535978 -10468678 + HMSBEAGLE_I LTR Gypsy 2936 3028 -3501 1 726 477 90 3 11 chrUextra 18536245 18536326 -10468330 + BS2 LINE Jockey 4659 4721 0 1 726 378 244 47 8 chrUextra 18536445 18536573 -10468083 - STALKER4_I LTR Gypsy -4140 2390 2258 1 726 5830 9 7 0 chrUextra 18536679 18537370 -10467286 + QUASIMODO_I LTR Gypsy 1050 1745 -4315 1 726 6089 3 9 0 chrUextra 18537470 18538161 -10466495 - DM176_I LTR Gypsy -1803 4617 3921 1 726 1053 0 0 0 chrUextra 18538263 18538380 -10466276 + (TCTTG)n Simple_repeat Simple_repeat 5 121 0 1 726 1962 4 0 9 chrUextra 18538380 18538606 -10466050 + DIVER_LTR LTR Pao 1 224 0 1 726 2919 9 0 0 chrUextra 18538627 18538952 -10465704 + DIVER_I LTR Pao 1 325 -5318 1 726 2869 185 28 14 chrUextra 18539052 18539743 -10464913 + SAR_DM Satellite Satellite 203 902 -570 1 726 1754 0 0 0 chrUextra 18540335 18540534 -10464122 - ALUII_DM Unknown Unknown 0 240 42 1 726 3413 171 9 7 chrUextra 18540634 18541324 -10463332 - SAR_DM Satellite Satellite -430 1042 352 1 726 3882 16 0 0 chrUextra 18541425 18541867 -10462789 + CIRCE LINE Composite 529 970 -5386 1 726 818 39 29 0 chrUextra 18542009 18542111 -10462545 + CIRCE LINE Composite 973 1077 -5279 1 726 251 186 0 0 chrUextra 18543054 18543097 -10461559 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2578 1 726 237 175 0 0 chrUextra 18543146 18543186 -10461470 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 726 242 103 25 25 chrUextra 18543238 18543278 -10461378 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 726 3122 0 0 0 chrUextra 18543351 18543698 -10460958 + G_DM LINE Jockey 1 347 -3999 1 726 3136 19 3 8 chrUextra 18543798 18544171 -10460485 + R1_DM LINE R1 4986 5356 0 1 726 2786 19 0 0 chrUextra 18544169 18544489 -10460167 + LSU-rRNA_Dme rRNA rRNA 2640 2959 -941 1 726 4349 48 63 6 chrUextra 18544589 18545221 -10459435 - Baggins1 LINE LOA -1420 4033 3366 1 726 547 106 0 12 chrUextra 18545194 18545280 -10459376 - Baggins1 LINE LOA -3224 2229 2145 1 726 2869 172 40 29 chrUextra 18545380 18546063 -10458593 + SAR_DM Satellite Satellite 469 1158 -314 1 726 5993 4 1 1 chrUextra 18546171 18546862 -10457794 - MDG3_I LTR Gypsy -285 4701 4011 1 726 5562 18 4 7 chrUextra 18546962 18547653 -10457003 - PROTOP_A DNA P -104 1001 313 1 726 3145 170 12 25 chrUextra 18547753 18548442 -10456214 + SAR_DM Satellite Satellite 411 1090 -382 1 726 232 150 0 24 chrUextra 18548548 18548589 -10456067 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 726 262 150 0 0 chrUextra 18548641 18548681 -10455975 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 726 22 56 0 0 chrUextra 18548686 18548722 -10455934 + AT_rich Low_complexity Low_complexity 1 36 0 1 726 4027 0 2 0 chrUextra 18548794 18549235 -10455421 - LSU-rRNA_Dme rRNA rRNA 0 3900 3459 1 726 5912 13 0 0 chrUextra 18549335 18550026 -10454630 - ROO_I LTR Pao -4682 3574 2884 1 726 2529 188 87 31 chrUextra 18550126 18550813 -10453843 + SAR_DM Satellite Satellite 523 1248 -224 1 726 6083 3 1 1 chrUextra 18550917 18551608 -10453048 - R1_DM LINE R1 -4034 1322 632 1 726 5050 10 2 3 chrUextra 18551708 18552290 -10452366 + R1_DM LINE R1 3307 3887 -1469 1 726 831 38 0 9 chrUextra 18552293 18552399 -10452257 + R1_DM LINE R1 4143 4247 -1109 1 726 28 48 0 0 chrUextra 18552754 18552796 -10451860 + AT_rich Low_complexity Low_complexity 1 42 0 1 726 32 0 0 0 chrUextra 18553123 18553155 -10451501 + AT_rich Low_complexity Low_complexity 1 32 0 1 726 2923 180 9 22 chrUextra 18553299 18553981 -10450675 - SAR_DM Satellite Satellite -354 1118 446 1 726 2550 27 0 0 chrUextra 18554081 18554379 -10450277 + ROO_I LTR Pao 1380 1677 -6579 1 726 1775 127 70 0 chrUextra 18554379 18554679 -10449977 - MAX_LTR LTR Pao 0 321 1 1 726 551 96 0 0 chrUextra 18554689 18554772 -10449884 - MAX_I LTR Pao -2 7912 7830 1 726 5251 53 0 14 chrUextra 18554897 18555563 -10449093 + BATUMI_I LTR Pao 4315 4971 -2992 1 726 6256 0 0 0 chrUextra 18555663 18556353 -10448303 - G2_DM LINE Jockey -689 2413 1724 1 726 5557 22 19 0 chrUextra 18556454 18557145 -10447511 + MAX_I LTR Pao 1416 2119 -5795 1 726 5612 22 4 3 chrUextra 18557247 18557935 -10446721 - R1_DM LINE R1 -3209 2147 1459 1 726 34 24 0 0 chrUextra 18558669 18558710 -10445946 + AT_rich Low_complexity Low_complexity 1 41 0 1 726 2896 6 0 6 chrUextra 18558827 18559176 -10445480 + BATUMI_I LTR Pao 7617 7963 0 1 726 2242 21 0 27 chrUextra 18559176 18559469 -10445187 + BATUMI_I LTR Pao 7002 7286 -677 1 726 346 34 0 0 chrUextra 18559459 18559518 -10445138 + G_DM LINE Jockey 638 696 -3650 1 726 1139 26 0 7 chrUextra 18559618 18559770 -10444886 - NTS_DM Other Other -52 188 38 1 726 850 18 0 27 chrUextra 18559770 18559882 -10444774 - NTS_DM Other Other -107 133 25 1 726 1234 24 0 6 chrUextra 18559934 18560099 -10444557 - NTS_DM Other Other -39 201 38 1 726 870 9 0 27 chrUextra 18560099 18560211 -10444445 - NTS_DM Other Other -107 133 25 1 726 22 56 0 0 chrUextra 18560237 18560273 -10444383 + AT_rich Low_complexity Low_complexity 1 36 0 1 726 2867 171 14 26 chrUextra 18560410 18561100 -10443556 - SAR_DM Satellite Satellite -366 1106 425 1 726 27 29 0 0 chrUextra 18561258 18561292 -10443364 + AT_rich Low_complexity Low_complexity 1 34 0 1 726 250 33 0 0 chrUextra 18561531 18561561 -10443095 + Baggins1 LINE LOA 4727 4756 -697 1 726 693 103 241 0 chrUextra 18561569 18561714 -10442942 + FB4_DM DNA Tc1 3908 4087 -2 1 726 3009 177 9 9 chrUextra 18561991 18562679 -10441977 - SAR_DM Satellite Satellite -539 933 246 1 726 5887 1 0 1 chrUextra 18562782 18563473 -10441183 + FW_DM LINE Jockey 1437 2126 -2566 1 726 34 24 0 0 chrUextra 18563579 18563620 -10441036 + AT_rich Low_complexity Low_complexity 1 41 0 1 726 561 60 0 12 chrUextra 18564364 18564449 -10440207 - ARS406_DM Unknown Unknown -269 84 1 1 726 2859 181 8 8 chrUextra 18564393 18565055 -10439601 + SAR_DM Satellite Satellite 229 890 -582 1 726 262 106 0 21 chrUextra 18565588 18565636 -10439020 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 726 351 49 65 16 chrUextra 18565658 18565720 -10438936 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 726 579 186 0 8 chrUextra 18565719 18565844 -10438812 - DMLTR5 LTR Gypsy 0 266 143 1 726 5920 0 1 4 chrUextra 18565946 18566637 -10438019 + SSU-rRNA_Dme rRNA rRNA 809 1497 -498 1 726 1322 23 0 6 chrUextra 18566737 18566909 -10437747 - NTS_DM Other Other -69 171 1 1 726 1734 21 17 17 chrUextra 18566909 18567149 -10437507 - NTS_DM Other Other 0 240 1 1 726 1408 20 20 20 chrUextra 18567149 18567352 -10437304 - NTS_DM Other Other 0 240 38 1 726 583 0 13 0 chrUextra 18567352 18567428 -10437228 - NTS_DM Other Other -107 133 57 1 726 2052 210 72 12 chrUextra 18567528 18568211 -10436445 + SAR_DM Satellite Satellite 1 723 -281 1 726 585 0 0 0 chrUextra 18568319 18568384 -10436272 + (TTCTC)n Simple_repeat Simple_repeat 4 68 0 1 726 1620 2 0 0 chrUextra 18568394 18568804 -10435852 + (GAGAA)n Simple_repeat Simple_repeat 1 410 0 1 726 771 10 10 0 chrUextra 18569110 18569206 -10435450 + NTS_DM Other Other 37 133 -107 1 726 787 0 0 10 chrUextra 18569206 18569303 -10435353 + NTS_DM Other Other 38 133 -107 1 726 1408 20 20 20 chrUextra 18569303 18569506 -10435150 + NTS_DM Other Other 38 240 0 1 726 1734 21 17 17 chrUextra 18569506 18569746 -10434910 + NTS_DM Other Other 1 240 0 1 726 466 18 0 0 chrUextra 18569746 18569801 -10434855 + NTS_DM Other Other 1 55 -185 1 726 1834 281 29 3 chrUextra 18570761 18571383 -10433273 - Gypsy4_I LTR Gypsy -3039 3249 2612 1 726 4622 74 70 20 chrUextra 18571483 18572174 -10432482 + Gypsy12_I LTR Gypsy 4539 5263 -283 1 726 5907 3 1 3 chrUextra 18572274 18572965 -10431691 + SSU-rRNA_Dme rRNA rRNA 940 1629 -366 1 726 34 24 0 0 chrUextra 18573151 18573192 -10431464 + AT_rich Low_complexity Low_complexity 1 41 0 1 726 21 95 0 0 chrUextra 18573405 18573468 -10431188 + AT_rich Low_complexity Low_complexity 1 63 0 1 726 2003 0 0 91 chrUextra 18573480 18573756 -10430900 + LSU-rRNA_Dme rRNA rRNA 1 251 -3649 1 726 1587 14 0 0 chrUextra 18573872 18574170 -10430486 + (TTATA)n Simple_repeat Simple_repeat 1 298 0 1 726 2271 36 102 0 chrUextra 18574183 18574488 -10430168 + DM1731_LTR LTR Copia 1 336 0 1 726 437 0 34 0 chrUextra 18574488 18574547 -10430109 + DM1731_I LTR Copia 1 61 -3915 1 726 3349 0 0 3 chrUextra 18574647 18575033 -10429623 + R2_DM LINE R2 3214 3598 -9 1 726 2665 7 3 0 chrUextra 18575029 18575338 -10429318 + LSU-rRNA_Dme rRNA rRNA 2578 2887 -1013 1 726 488 0 0 0 chrUextra 18575438 18575494 -10429162 - SSU-rRNA_Dme rRNA rRNA -1939 56 1 1 726 32 0 0 0 chrUextra 18575626 18575658 -10428998 + AT_rich Low_complexity Low_complexity 1 32 0 1 726 28 48 0 0 chrUextra 18575986 18576028 -10428628 + AT_rich Low_complexity Low_complexity 1 42 0 1 726 618 14 0 0 chrUextra 18576229 18576301 -10428355 - NTS_DM Other Other -168 72 1 1 726 1734 21 17 17 chrUextra 18576301 18576541 -10428115 - NTS_DM Other Other 0 240 1 1 726 1726 17 17 21 chrUextra 18576541 18576782 -10427874 - NTS_DM Other Other 0 240 1 1 726 823 30 29 29 chrUextra 18576782 18576920 -10427736 - NTS_DM Other Other 0 240 103 1 726 4860 93 0 1 chrUextra 18577020 18577710 -10426946 + R1_DM LINE R1 1248 1936 -3420 1 726 514 189 0 0 chrUextra 18577811 18577922 -10426734 - ARS406_DM Unknown Unknown -242 111 1 1 726 2505 206 28 7 chrUextra 18577825 18578500 -10426156 + SAR_DM Satellite Satellite 191 879 -593 1 726 5506 19 0 0 chrUextra 18578602 18579293 -10425363 - QUASIMODO_I LTR Gypsy -4415 1645 955 1 726 1158 122 0 0 chrUextra 18579403 18579583 -10425073 + (TA)n Simple_repeat Simple_repeat 1 180 0 1 726 2316 8 0 0 chrUextra 18579583 18579849 -10424807 + DMLTR5 LTR Gypsy 1 266 0 1 726 2002 0 4 0 chrUextra 18579848 18580084 -10424572 + HMSBEAGLE_I LTR Gypsy 1 237 -6292 1 726 5477 7 35 1 chrUextra 18580184 18580875 -10423781 + Invader2_I LTR Gypsy 3594 4307 -285 1 726 6033 0 3 0 chrUextra 18580975 18581666 -10422990 - LSU-rRNA_Dme rRNA rRNA -364 3536 2844 1 726 1028 165 97 30 chrUextra 18581768 18582037 -10422619 - Gypsy12_LTR LTR Gypsy -892 1444 1158 1 726 688 259 37 84 chrUextra 18582049 18582454 -10422202 - Gypsy12_LTR LTR Gypsy -1258 1078 693 1 726 5435 32 42 1 chrUextra 18582559 18583248 -10421408 + BS2 LINE Jockey 2048 2764 -1957 1 726 5579 25 0 0 chrUextra 18583348 18584039 -10420617 + MDG1_I LTR Gypsy 2808 3498 -3098 1 726 256 227 0 0 chrUextra 18584195 18584261 -10420395 - HMSBEAGLE_I LTR Gypsy -2085 4444 4379 1 726 463 284 27 11 chrUextra 18584293 18584533 -10420123 - HMSBEAGLE_I LTR Gypsy -2209 4320 4106 1 726 5803 1 0 0 chrUextra 18584930 18585621 -10419035 + ROO_I LTR Pao 647 1337 -6919 1 726 2719 12 0 3 chrUextra 18585721 18586043 -10418613 - DMRT1B LINE R1 -4862 321 1 1 726 349 39 0 89 chrUextra 18586268 18586324 -10418332 - QUASIMODO_LTR LTR Gypsy -607 51 1 1 726 421 82 0 0 chrUextra 18586351 18586412 -10418244 + ROVER-LTR_DM LTR Gypsy 46 106 -261 1 726 2257 177 6 10 chrUextra 18587303 18587356 -10417300 - SAR_DM Satellite Satellite -417 686 619 1 726 1068 91 0 0 chrUextra 18587356 18587521 -10417135 + ARS406_DM Unknown Unknown 1 165 -188 1 726 2257 177 6 10 chrUextra 18587521 18587992 -10416664 - SAR_DM Satellite Satellite -417 618 1 1 726 5975 1 0 0 chrUextra 18588094 18588785 -10415871 + FW_DM LINE Jockey 3141 3831 -861 1 726 5295 6 4 3 chrUextra 18588885 18589576 -10415080 + FB4_DM DNA Tc1 3008 3699 -390 1 726 2423 7 0 3 chrUextra 18589676 18589961 -10414695 - LSU-rRNA_Dme rRNA rRNA -977 2923 2640 1 726 3465 7 0 0 chrUextra 18589963 18590367 -10414289 - R1_DM LINE R1 0 5356 4953 1 726 990 9 0 8 chrUextra 18591258 18591376 -10413280 + R1_DM LINE R1 5240 5356 0 1 726 5035 2 0 0 chrUextra 18591374 18591949 -10412707 + LSU-rRNA_Dme rRNA rRNA 2640 3214 -686 1 726 5140 45 28 1 chrUextra 18592049 18592740 -10411916 - R1_DM LINE R1 -3940 1416 708 1 726 3977 23 110 1 chrUextra 18592840 18593531 -10411125 - R1_DM LINE R1 -1446 3910 3145 1 726 5753 19 0 0 chrUextra 18594422 18595113 -10409543 - R1_DM LINE R1 -3004 2352 1662 1 726 2260 113 39 16 chrUextra 18595213 18595904 -10408752 - DMSAT6 Satellite Satellite 0 707 1 1 726 22 56 0 0 chrUextra 18596181 18596217 -10408439 + AT_rich Low_complexity Low_complexity 1 36 0 1 726 2880 180 8 9 chrUextra 18597586 18598238 -10406418 - SAR_DM Satellite Satellite -627 845 195 1 726 794 114 0 0 chrUextra 18598145 18598277 -10406379 + ARS406_DM Unknown Unknown 1 132 -221 1 726 662 12 12 0 chrUextra 18598379 18598461 -10406195 - ROO_I LTR Pao -565 7691 7609 1 726 5162 7 0 0 chrUextra 18598461 18599068 -10405588 - ROO_I LTR Pao -1677 6579 5973 1 726 5787 1 1 1 chrUextra 18599168 18599839 -10404817 - LSU-rRNA_Dme rRNA rRNA -1442 2458 1788 1 726 3311 7 17 19 chrUextra 18600750 18601167 -10403489 - QUASIMODO_I LTR Gypsy -5644 416 1 1 726 2296 7 0 4 chrUextra 18601167 18601441 -10403215 - QUASIMODO_LTR LTR Gypsy 0 658 386 1 726 1446 6 0 0 chrUextra 18602069 18602232 -10402424 + (CAAGA)n Simple_repeat Simple_repeat 3 165 0 1 726 5528 30 1 0 chrUextra 18602332 18603023 -10401633 - R1_DM LINE R1 -2053 3303 2612 1 726 5853 0 1 4 chrUextra 18603123 18603814 -10400842 - R1_DM LINE R1 -3273 2083 1395 1 726 6071 1 0 0 chrUextra 18603914 18604605 -10400051 + R2_DM LINE R2 2884 3574 -33 1 726 5845 3 1 1 chrUextra 18604705 18605396 -10399260 - R1_DM LINE R1 -3854 1502 812 1 726 5936 12 0 0 chrUextra 18605496 18606187 -10398469 + R2_DM LINE R2 2796 3486 -121 1 726 2911 192 6 7 chrUextra 18606287 18606975 -10397681 - SAR_DM Satellite Satellite -594 878 192 1 726 3134 39 5 2 chrUextra 18607095 18607532 -10397124 + IDEFIX_I LTR Gypsy 5154 5591 -37 1 726 1598 75 4 0 chrUextra 18607530 18607769 -10396887 + IDEFIX_LTR LTR Gypsy 40 279 -315 1 726 280 265 0 0 chrUextra 18608142 18608244 -10396412 + IDEFIX_I LTR Gypsy 4711 4812 -816 1 726 1166 7 0 0 chrUextra 18608424 18608560 -10396096 + BS2 LINE Jockey 9 144 -4577 1 726 1990 25 0 0 chrUextra 18608660 18608903 -10395753 + ROO_I LTR Pao 1435 1677 -6579 1 726 1647 123 70 3 chrUextra 18608903 18609204 -10395452 - MAX_LTR LTR Pao 0 321 1 1 726 941 73 0 0 chrUextra 18609214 18609351 -10395305 - MAX_I LTR Pao -2 7912 7776 1 726 5781 10 0 1 chrUextra 18609451 18610142 -10394514 + STALKER4_I LTR Gypsy 4421 5110 -1420 1 726 5218 13 1 0 chrUextra 18610262 18610933 -10393723 - DM176_I LTR Gypsy 0 6420 5749 1 726 2625 3 6 3 chrUextra 18611033 18611374 -10393282 + DM176_I LTR Gypsy 5667 6008 -412 1 726 2754 34 77 19 chrUextra 18611360 18611724 -10392932 + ROO_I LTR Pao 4199 4583 -3673 1 726 1835 17 17 17 chrUextra 18611851 18612091 -10392565 - NTS_DM Other Other 0 240 1 1 90 1835 17 17 17 chrUextra 18612091 18612331 -10392325 - NTS_DM Other Other 0 240 1 1 727 1290 17 22 22 chrUextra 18612331 18612515 -10392141 - NTS_DM Other Other 0 240 57 1 727 3225 182 7 6 chrUextra 18612624 18613302 -10391354 + SAR_DM Satellite Satellite 369 1047 -425 1 727 1620 0 0 0 chrUextra 18613704 18614097 -10390559 + (AATAG)n Simple_repeat Simple_repeat 1 393 0 1 727 370 0 23 0 chrUextra 18614197 18614241 -10390415 - NTS_DM Other Other -195 45 1 1 727 1930 4 17 13 chrUextra 18614241 18614480 -10390176 - NTS_DM Other Other 0 240 1 1 727 1882 13 17 13 chrUextra 18614480 18614719 -10389937 - NTS_DM Other Other 0 240 1 1 727 1154 18 24 24 chrUextra 18614719 18614888 -10389768 - NTS_DM Other Other 0 240 72 1 727 5861 3 45 1 chrUextra 18614990 18615679 -10388977 - R1_DM LINE R1 -3919 1437 719 1 727 40 21 0 0 chrUextra 18616338 18616385 -10388271 + AT_rich Low_complexity Low_complexity 1 47 0 1 727 537 14 0 0 chrUextra 18616401 18616470 -10388186 - Gypsy4_I LTR Gypsy -5911 377 309 1 727 974 87 33 0 chrUextra 18616570 18616720 -10387936 + ARS406_DM Unknown Unknown 35 189 -164 1 727 3010 192 20 3 chrUextra 18616602 18617261 -10387395 - SAR_DM Satellite Satellite -535 937 268 1 727 1093 16 0 0 chrUextra 18617361 18617488 -10387168 - R1_DM LINE R1 -522 4834 4708 1 727 5160 2 0 0 chrUextra 18617486 18618052 -10386604 - LSU-rRNA_Dme rRNA rRNA -1249 2651 2086 1 727 6202 7 3 0 chrUextra 18618152 18618843 -10385813 + Copia2_I LTR Copia 1576 2268 -1894 1 727 3027 171 12 18 chrUextra 18618943 18619609 -10385047 - SAR_DM Satellite Satellite -616 856 195 1 727 694 119 0 8 chrUextra 18619515 18619634 -10385022 + ARS406_DM Unknown Unknown 1 118 -235 1 727 6066 6 0 1 chrUextra 18619734 18620425 -10384231 - R1_DM LINE R1 -4444 912 223 1 727 2959 25 50 0 chrUextra 18620525 18620885 -10383771 - PROTOP DNA P -4102 378 1 1 727 6110 17 0 0 chrUextra 18621316 18622007 -10382649 + R1_DM LINE R1 4016 4706 -650 1 727 1562 0 6 0 chrUextra 18622107 18622280 -10382376 + LSU-rRNA_Dme rRNA rRNA 3727 3900 0 1 727 22 56 0 0 chrUextra 18622352 18622388 -10382268 + AT_rich Low_complexity Low_complexity 1 36 0 1 727 262 150 0 0 chrUextra 18622393 18622433 -10382223 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 727 262 150 0 0 chrUextra 18622485 18622525 -10382131 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 727 262 150 0 0 chrUextra 18622577 18622617 -10382039 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 727 269 125 0 0 chrUextra 18622660 18622700 -10381956 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 727 22 56 0 0 chrUextra 18622713 18622749 -10381907 + AT_rich Low_complexity Low_complexity 1 36 0 1 727 32 0 0 0 chrUextra 18622955 18622987 -10381669 + AT_rich Low_complexity Low_complexity 1 32 0 1 727 28 48 0 0 chrUextra 18623315 18623357 -10381299 + AT_rich Low_complexity Low_complexity 1 42 0 1 727 389 296 18 18 chrUextra 18624127 18624292 -10380364 - MDG3_I LTR Gypsy -1559 3427 3263 1 727 5956 14 4 0 chrUextra 18624480 18625171 -10379485 - Gypsy4_I LTR Gypsy -1321 4967 4274 1 727 3396 166 9 9 chrUextra 18625273 18625961 -10378695 + SAR_DM Satellite Satellite 369 1056 -416 1 727 2646 83 19 9 chrUextra 18626062 18626753 -10377903 - DMSAT6 Satellite Satellite -45 698 1 1 727 6056 0 0 3 chrUextra 18626853 18627544 -10377112 - MDG3_I LTR Gypsy -1610 3376 2688 1 727 1100 88 0 0 chrUextra 18627644 18627803 -10376853 - ARS406_DM Unknown Unknown -193 160 2 1 727 2346 192 61 16 chrUextra 18627803 18628335 -10376321 + SAR_DM Satellite Satellite 1 722 -216 1 727 3040 179 10 19 chrUextra 18628436 18629126 -10375530 + SAR_DM Satellite Satellite 191 874 -598 1 727 3123 174 9 13 chrUextra 18629235 18629917 -10374739 + SAR_DM Satellite Satellite 192 870 -602 1 727 4449 4 0 6 chrUextra 18630808 18631311 -10373345 + DMRT1B LINE R1 4684 5183 0 1 727 1585 16 0 21 chrUextra 18631310 18631498 -10373158 - R1_DM LINE R1 -760 4596 4413 1 727 3109 182 12 9 chrUextra 18631599 18632288 -10372368 + SAR_DM Satellite Satellite 278 968 -504 1 727 4085 44 19 83 chrUextra 18632388 18633078 -10371578 + BATUMI_I LTR Pao 100 745 -7218 1 727 6186 0 1 4 chrUextra 18633178 18633868 -10370788 - SSU-rRNA_Dme rRNA rRNA -559 1436 749 1 727 6228 4 0 0 chrUextra 18633968 18634658 -10369998 + DOC2_DM LINE Jockey 3279 3968 -825 1 727 5653 1 5 5 chrUextra 18634758 18635404 -10369252 + LSU-rRNA_Dme rRNA rRNA 1140 1785 -2115 1 727 1459 216 42 11 chrUextra 18635877 18636238 -10368418 + HETA LINE telomeric 4020 4391 -1690 1 727 3094 179 9 9 chrUextra 18636339 18637003 -10367653 - SAR_DM Satellite Satellite -614 858 195 1 727 700 120 8 0 chrUextra 18636911 18637028 -10367628 + ARS406_DM Unknown Unknown 1 118 -235 1 727 873 0 0 0 chrUextra 18637128 18637225 -10367431 + DM176_I LTR Gypsy 6324 6420 0 1 727 2290 11 0 78 chrUextra 18637225 18637532 -10367124 + DM176_LTR LTR Gypsy 1 283 -224 1 727 2108 20 16 0 chrUextra 18637533 18637786 -10366870 + DM176_LTR LTR Gypsy 251 507 0 1 727 1493 132 57 3 chrUextra 18638047 18638329 -10366327 - DNAREP1_DM LINE Penelope -297 297 1 1 727 655 0 0 0 chrUextra 18638708 18638779 -10365877 - NTS_DM Other Other -169 71 1 1 727 1940 0 17 13 chrUextra 18638779 18639018 -10365638 - NTS_DM Other Other 0 240 1 1 727 1930 4 17 13 chrUextra 18639018 18639257 -10365399 - NTS_DM Other Other 0 240 1 1 727 888 29 28 28 chrUextra 18639257 18639398 -10365258 - NTS_DM Other Other 0 240 100 1 727 2561 212 10 14 chrUextra 18639500 18640188 -10364468 + SAR_DM Satellite Satellite 272 956 -516 1 727 416 216 0 18 chrUextra 18640288 18640401 -10364255 + XDMR_DM Unknown Unknown 250 360 0 1 727 2752 185 11 21 chrUextra 18640315 18640978 -10363678 - SAR_DM Satellite Satellite -353 1119 464 1 727 3079 164 19 19 chrUextra 18641095 18641766 -10362890 + SAR_DM Satellite Satellite 321 991 -481 1 727 5992 23 1 0 chrUextra 18641868 18642558 -10362098 - R1_DM LINE R1 -238 5118 4428 1 727 907 9 0 27 chrUextra 18642754 18642866 -10361790 + NTS_DM Other Other 25 133 -107 1 727 1541 5 20 20 chrUextra 18642866 18643069 -10361587 + NTS_DM Other Other 38 240 0 1 727 1860 17 17 13 chrUextra 18643069 18643308 -10361348 + NTS_DM Other Other 1 240 0 1 727 348 25 0 0 chrUextra 18643308 18643348 -10361308 + NTS_DM Other Other 1 40 -200 1 727 5157 32 68 14 chrUextra 18643448 18644138 -10360518 + BATUMI_I LTR Pao 2692 3418 -4545 1 727 277 54 0 0 chrUextra 18644238 18644275 -10360381 + R1_DM LINE R1 1354 1390 -3966 1 727 5431 28 21 0 chrUextra 18644276 18644928 -10359728 - FW_DM LINE Jockey -4 4688 4023 1 727 5151 7 0 2 chrUextra 18645028 18645607 -10359049 + R1_DM LINE R1 4779 5356 0 1 727 1027 9 0 0 chrUextra 18645605 18645718 -10358938 + LSU-rRNA_Dme rRNA rRNA 2640 2752 -1148 1 727 6098 12 6 0 chrUextra 18645818 18646508 -10358148 - Copia2_I LTR Copia -962 3200 2507 1 727 667 114 0 0 chrUextra 18646608 18646713 -10357943 - ARS406_DM Unknown Unknown -248 105 1 1 727 3150 179 7 9 chrUextra 18646620 18647298 -10357358 + SAR_DM Satellite Satellite 195 871 -601 1 727 2225 155 135 29 chrUextra 18647398 18648088 -10356568 - STALKER4_I LTR Gypsy -5310 1220 408 1 727 5657 19 25 25 chrUextra 18648188 18648878 -10355778 - Gypsy6_I LTR Gypsy -1250 5762 5073 1 727 771 11 0 11 chrUextra 18648978 18649068 -10355588 - NTS_DM Other Other -151 89 1 1 727 1472 20 20 20 chrUextra 18649068 18649271 -10355385 - NTS_DM Other Other 0 240 38 1 727 851 0 0 0 chrUextra 18649271 18649367 -10355289 - NTS_DM Other Other -107 133 38 1 727 870 9 9 27 chrUextra 18649367 18649478 -10355178 - NTS_DM Other Other -107 133 25 1 727 21 57 0 0 chrUextra 18649504 18649539 -10355117 + AT_rich Low_complexity Low_complexity 1 35 0 1 727 925 24 0 8 chrUextra 18649539 18649668 -10354988 - NTS_DM Other Other -39 201 74 1 727 2423 104 1 50 chrUextra 18649770 18650456 -10354200 + DMSAT6 Satellite Satellite 1 652 -82 1 727 40 67 0 0 chrUextra 18650695 18650770 -10353886 + AT_rich Low_complexity Low_complexity 1 75 0 1 727 734 104 0 0 chrUextra 18651348 18651463 -10353193 - ARS406_DM Unknown Unknown -230 123 9 1 727 3090 162 23 15 chrUextra 18651378 18652037 -10352619 + SAR_DM Satellite Satellite 195 858 -614 1 727 2398 170 13 3 chrUextra 18652138 18652828 -10351828 - SAR_DM Satellite Satellite -626 696 1 1 727 6098 3 0 0 chrUextra 18652928 18653618 -10351038 - ROO_I LTR Pao -987 7269 6580 1 727 3152 177 15 10 chrUextra 18653718 18654403 -10350253 - SAR_DM Satellite Satellite -539 933 246 1 727 238 156 0 0 chrUextra 18654363 18654408 -10350248 + ARS406_DM Unknown Unknown 1 45 -308 1 727 3154 10 65 0 chrUextra 18654508 18655198 -10349458 - DMRT1B LINE R1 -2189 2994 2260 1 727 3220 180 7 7 chrUextra 18655298 18655981 -10348675 - SAR_DM Satellite Satellite -544 928 246 1 727 270 128 0 0 chrUextra 18655941 18655988 -10348668 + ARS406_DM Unknown Unknown 1 47 -306 1 727 3302 171 7 7 chrUextra 18656088 18656770 -10347886 + SAR_DM Satellite Satellite 198 879 -593 1 727 585 42 0 0 chrUextra 18656706 18656778 -10347878 - ARS406_DM Unknown Unknown -164 189 118 1 727 1693 5 0 0 chrUextra 18656878 18657081 -10347575 + DOC LINE Jockey 4523 4725 0 1 727 4161 8 0 0 chrUextra 18657086 18657568 -10347088 + QUASIMODO_I LTR Gypsy 2408 2889 -3171 1 727 6101 16 0 0 chrUextra 18657668 18658358 -10346298 - DMRT1A LINE R1 -2669 2514 1825 1 727 291 329 27 31 chrUextra 18658808 18659146 -10345510 + BLASTOPIA_I LTR Gypsy 2178 2566 -2420 1 727 2633 178 21 8 chrUextra 18659248 18659938 -10344718 + SAR_DM Satellite Satellite 326 1215 -257 1 727 6163 3 3 3 chrUextra 18660038 18660728 -10343928 + SSU-rRNA_Dme rRNA rRNA 1083 1772 -223 1 727 3235 167 12 15 chrUextra 18660837 18661518 -10343138 + SAR_DM Satellite Satellite 191 869 -603 1 727 6173 1 0 1 chrUextra 18661618 18662308 -10342348 + FW_DM LINE Jockey 1547 2235 -2457 1 727 2403 97 26 45 chrUextra 18662412 18663077 -10341579 - DMSAT6 Satellite Satellite -29 651 1 1 727 4685 7 36 0 chrUextra 18663198 18663753 -10340903 + IDEFIX_LTR LTR Gypsy 20 594 0 1 727 3238 175 12 7 chrUextra 18663993 18664678 -10339978 - SAR_DM Satellite Satellite -535 937 250 1 727 1036 16 0 8 chrUextra 18664778 18664901 -10339755 + STALKER4_LTR LTR Gypsy 281 402 0 1 727 2942 191 0 0 chrUextra 18664928 18665468 -10339188 - ROVER-I_DM LTR Gypsy -2475 4109 3570 1 727 751 355 24 9 chrUextra 18665717 18666258 -10338398 + MICROPIA_I LTR Gypsy 907 1455 -3021 1 727 5134 21 63 9 chrUextra 18666358 18666992 -10337664 - FW_DM LINE Jockey -1892 2800 2133 1 727 516 90 0 0 chrUextra 18666981 18667048 -10337608 - R1_DM LINE R1 -4970 386 320 1 727 1354 286 21 4 chrUextra 18667149 18667682 -10336974 + ROVER-I_DM LTR Gypsy 1094 1635 -4949 1 727 392 252 10 0 chrUextra 18667710 18667813 -10336843 + ROVER-I_DM LTR Gypsy 2190 2293 -4291 1 727 5394 10 0 0 chrUextra 18667938 18668628 -10336028 + DM297_I LTR Gypsy 5469 6158 -9 1 727 2742 200 16 23 chrUextra 18668730 18669418 -10335238 + SAR_DM Satellite Satellite 1 683 -208 1 727 2084 4 0 0 chrUextra 18669518 18669758 -10334898 - SSU-rRNA_Dme rRNA rRNA -1755 240 1 1 727 32 0 0 0 chrUextra 18669890 18669922 -10334734 + AT_rich Low_complexity Low_complexity 1 32 0 1 727 5875 3 1 1 chrUextra 18671098 18671788 -10332868 + LSU-rRNA_Dme rRNA rRNA 633 1322 -2578 1 727 1641 123 0 0 chrUextra 18671890 18672133 -10332523 + Gypsy12_I LTR Gypsy 1579 1821 -3725 1 727 2914 87 58 20 chrUextra 18672130 18672578 -10332078 + Gypsy12_I LTR Gypsy 4465 4929 -617 1 727 938 290 29 29 chrUextra 18672777 18673244 -10331412 - Copia2_I LTR Copia -2242 1920 1392 1 727 3130 174 9 10 chrUextra 18673470 18674157 -10330499 - SAR_DM Satellite Satellite -435 1037 352 1 727 3158 163 10 12 chrUextra 18674259 18674948 -10329708 + SAR_DM Satellite Satellite 346 1033 -439 1 727 5536 35 0 0 chrUextra 18675048 18675738 -10328918 + NINJA_I LTR Pao 1491 2180 -3831 1 727 3382 248 16 40 chrUextra 18675838 18677298 -10327358 + SAR_DM Satellite Satellite 1 1425 -354 1 727 6000 0 4 0 chrUextra 18677418 18678108 -10326548 + LSU-rRNA_Dme rRNA rRNA 3123 3815 -85 1 727 6007 0 0 1 chrUextra 18678208 18678898 -10325758 + LSU-rRNA_Dme rRNA rRNA 2257 2945 -955 1 727 5555 16 3 3 chrUextra 18678998 18679688 -10324968 + G_DM LINE Jockey 1776 2465 -1881 1 727 2705 169 34 14 chrUextra 18679825 18680474 -10324182 + SAR_DM Satellite Satellite 242 903 -569 1 727 2189 111 10 33 chrUextra 18680578 18681268 -10323388 + DMSAT6 Satellite Satellite 1 673 0 1 727 24 0 0 0 chrUextra 18681451 18681475 -10323181 + AT_rich Low_complexity Low_complexity 1 24 0 1 727 5566 23 1 1 chrUextra 18682949 18683638 -10321018 - R1_DM LINE R1 -1467 3889 3201 1 727 5664 0 9 0 chrUextra 18683738 18684428 -10320228 + ROO_I LTR Pao 229 924 -7332 1 727 2583 187 16 25 chrUextra 18684529 18685215 -10319441 + SAR_DM Satellite Satellite 473 1152 -320 1 727 725 290 111 0 chrUextra 18685381 18685740 -10318916 + HMSBEAGLE_I LTR Gypsy 3290 3688 -2841 1 727 5372 13 0 0 chrUextra 18686108 18686740 -10317916 + BATUMI_I LTR Pao 4684 5315 -2648 1 727 417 68 0 17 chrUextra 18686738 18686798 -10317858 + BATUMI_I LTR Pao 5672 5730 -2233 1 727 5209 16 71 3 chrUextra 18687688 18688378 -10316278 - R1_DM LINE R1 -1084 4272 3536 1 727 351 85 661 14 chrUextra 18688810 18688942 -10315714 - HMSBEAGLE_I LTR Gypsy -6308 221 1 1 727 908 177 97 15 chrUextra 18688941 18689147 -10315509 - DMLTR5 LTR Gypsy 0 266 44 1 727 2934 179 15 9 chrUextra 18689272 18689956 -10314700 - SAR_DM Satellite Satellite -593 879 192 1 727 2579 183 22 31 chrUextra 18690060 18690747 -10313909 + SAR_DM Satellite Satellite 479 1159 -313 1 727 2292 103 3 46 chrUextra 18690848 18691538 -10313118 - DMSAT6 Satellite Satellite -86 659 1 1 727 487 44 0 0 chrUextra 18691638 18691706 -10312950 + FW_DM LINE Jockey 1457 1524 -3168 1 727 5193 11 2 0 chrUextra 18691700 18692328 -10312328 + FW_DM LINE Jockey 2575 3203 -1489 1 727 6035 0 0 1 chrUextra 18692428 18693118 -10311538 - GTWIN_I LTR Gypsy -1296 5125 4437 1 727 2624 202 18 23 chrUextra 18693219 18693908 -10310748 + SAR_DM Satellite Satellite 1 684 -227 1 727 3067 179 9 7 chrUextra 18694009 18694697 -10309959 - SAR_DM Satellite Satellite -458 1014 326 1 727 2888 179 10 13 chrUextra 18694806 18695487 -10309169 + SAR_DM Satellite Satellite 195 873 -599 1 727 3798 33 10 4 chrUextra 18695588 18696072 -10308584 + DMRT1B LINE R1 4697 5183 0 1 727 192 40 0 0 chrUextra 18696081 18696106 -10308550 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 727 3141 25 18 31 chrUextra 18696378 18696889 -10307767 - ROO_I LTR Pao -7645 611 1 1 727 1423 45 0 0 chrUextra 18696889 18697068 -10307588 - ROO_LTR LTR Pao 0 428 250 1 727 846 79 0 0 chrUextra 18697168 18697294 -10307362 - ARS406_DM Unknown Unknown -227 126 1 1 727 2908 171 9 9 chrUextra 18697198 18697858 -10306798 + SAR_DM Satellite Satellite 192 851 -621 1 727 363 0 66 49 chrUextra 18697958 18698019 -10306637 + NTS_DM Other Other 179 240 0 1 727 1704 21 17 21 chrUextra 18698019 18698260 -10306396 + NTS_DM Other Other 1 240 0 1 727 1734 21 17 17 chrUextra 18698260 18698500 -10306156 + NTS_DM Other Other 1 240 0 1 727 1204 14 0 0 chrUextra 18698500 18698647 -10306009 + NTS_DM Other Other 1 147 -93 1 727 5390 23 58 0 chrUextra 18698750 18699438 -10305218 + Gypsy4_I LTR Gypsy 1031 1758 -4530 1 727 5338 18 0 16 chrUextra 18699538 18700228 -10304428 + CIRCE LINE Composite 4204 4882 -1474 1 727 861 183 102 15 chrUextra 18700620 18700825 -10303831 + DMLTR5 LTR Gypsy 44 266 0 1 727 351 49 65 16 chrUextra 18700824 18700886 -10303770 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 1 727 249 128 0 21 chrUextra 18700908 18700956 -10303700 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 727 248 0 77 0 chrUextra 18701118 18701157 -10303499 + R1_DM LINE R1 5315 5356 0 1 727 5716 1 0 0 chrUextra 18701155 18701808 -10302848 + LSU-rRNA_Dme rRNA rRNA 2640 3292 -608 1 727 648 0 0 0 chrUextra 18701908 18701980 -10302676 + (CTATT)n Simple_repeat Simple_repeat 2 73 0 1 727 5713 0 3 0 chrUextra 18702699 18703388 -10301268 + STALKER4_I LTR Gypsy 2880 3570 -2960 1 727 5711 16 0 4 chrUextra 18703488 18704178 -10300478 + MICROPIA_I LTR Gypsy 3431 4117 -359 1 727 1649 144 9 9 chrUextra 18704278 18704608 -10300048 - SAR_DM Satellite Satellite -817 655 326 1 727 2871 0 3 0 chrUextra 18704615 18704968 -10299688 - DOC LINE Jockey 0 4725 4372 1 727 5543 29 6 0 chrUextra 18705068 18705758 -10298898 - R1_DM LINE R1 -2189 3167 2474 1 727 21 89 0 0 chrUextra 18706259 18706315 -10298341 + AT_rich Low_complexity Low_complexity 1 56 0 1 727 1856 0 5 0 chrUextra 18706334 18706548 -10298108 - SSU-rRNA_Dme rRNA rRNA 0 1995 1781 1 727 5659 25 0 0 chrUextra 18706648 18707338 -10297318 - R1_DM LINE R1 -1781 3575 2886 1 727 2720 61 11 8 chrUextra 18707438 18707827 -10296829 + BATUMI_I LTR Pao 6097 6420 -1543 1 727 2636 21 3 18 chrUextra 18707787 18708128 -10296528 - BATUMI_I LTR Pao -962 7001 6666 1 727 5150 49 18 1 chrUextra 18708228 18708905 -10295751 + R1_DM LINE R1 930 1617 -3739 1 727 4728 107 0 0 chrUextra 18709018 18709702 -10294954 + HMSBEAGLE_I LTR Gypsy 4906 5589 -940 1 727 5985 0 3 1 chrUextra 18709808 18710498 -10294158 - LSU-rRNA_Dme rRNA rRNA -61 3839 3149 1 727 1176 0 0 0 chrUextra 18710600 18710735 -10293921 + 5S_DM RNA RNA 1 135 0 1 727 1137 8 0 7 chrUextra 18710966 18711102 -10293554 + 5S_DM RNA RNA 1 135 0 1 727 5555 32 0 0 chrUextra 18711388 18712076 -10292580 + R1_DM LINE R1 2208 2895 -2461 1 727 314 328 16 11 chrUextra 18712416 18712607 -10292049 + BLASTOPIA_I LTR Gypsy 3541 3732 -749 1 727 669 115 0 0 chrUextra 18712968 18713081 -10291575 - ARS406_DM Unknown Unknown -240 113 1 1 727 2743 187 6 10 chrUextra 18712988 18713658 -10290998 + SAR_DM Satellite Satellite 195 861 -611 1 727 5817 7 7 0 chrUextra 18713758 18714448 -10290208 - R2_DM LINE R2 -2411 1196 502 1 727 4595 0 0 0 chrUextra 18714554 18715083 -10289573 - ACCORD_LTR LTR Gypsy -29 529 1 1 727 1309 7 0 0 chrUextra 18715083 18715238 -10289418 + Invader2_I LTR Gypsy 620 774 -3818 1 727 3649 7 0 0 chrUextra 18715338 18715757 -10288899 - Invader1_I LTR Gypsy -2767 419 1 1 727 2275 11 4 0 chrUextra 18715757 18716028 -10288628 - Invader1_LTR LTR Gypsy 0 423 152 1 727 5222 12 25 0 chrUextra 18716128 18716818 -10287838 - QUASIMODO_I LTR Gypsy -361 5699 4993 1 727 3400 201 0 4 chrUextra 18716922 18717608 -10287048 - ROVER-I_DM LTR Gypsy -3326 3258 2576 1 727 602 0 0 14 chrUextra 18717708 18717782 -10286874 - NTS_DM Other Other -130 110 38 1 727 870 9 0 27 chrUextra 18717782 18717894 -10286762 - NTS_DM Other Other -107 133 25 1 727 1252 18 0 6 chrUextra 18717946 18718111 -10286545 - NTS_DM Other Other -39 201 38 1 727 870 9 0 27 chrUextra 18718111 18718223 -10286433 - NTS_DM Other Other -107 133 25 1 727 22 56 0 0 chrUextra 18718249 18718285 -10286371 + AT_rich Low_complexity Low_complexity 1 36 0 1 727 255 125 0 0 chrUextra 18718298 18718338 -10286318 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 727 5845 1 3 6 chrUextra 18718498 18719188 -10285468 + SSU-rRNA_Dme rRNA rRNA 1075 1762 -233 1 727 2969 238 23 43 chrUextra 18719293 18720763 -10283893 + SAR_DM Satellite Satellite 1 1440 -680 1 727 5964 0 28 0 chrUextra 18720868 18721558 -10283098 + R2_DM LINE R2 1544 2252 -1355 1 727 5768 7 10 0 chrUextra 18721658 18722348 -10282308 - QUASIMODO_I LTR Gypsy -1493 4567 3871 1 727 21 89 0 0 chrUextra 18722516 18722572 -10282084 + AT_rich Low_complexity Low_complexity 1 56 0 1 727 1946 168 24 10 chrUextra 18723239 18723649 -10281007 + SAR_DM Satellite Satellite 616 1031 -441 1 727 1278 161 11 8 chrUextra 18723666 18723928 -10280728 + SAR_DM Satellite Satellite 399 661 -811 1 727 473 198 0 10 chrUextra 18724028 18724125 -10280531 - HETRP_DM Satellite Satellite -248 1624 1529 1 727 672 200 14 14 chrUextra 18724268 18724415 -10280241 - HETRP_DM Satellite Satellite -197 1675 1529 1 727 530 238 8 16 chrUextra 18724560 18724688 -10279968 - HETRP_DM Satellite Satellite -197 1675 1549 1 727 210 37 0 0 chrUextra 18724688 18724715 -10279941 + (TC)n Simple_repeat Simple_repeat 2 28 0 1 727 1258 20 0 7 chrUextra 18724818 18724972 -10279684 - NTS_DM Other Other -87 153 1 1 727 1813 21 17 17 chrUextra 18724972 18725212 -10279444 - NTS_DM Other Other 0 240 1 1 727 1472 20 20 20 chrUextra 18725212 18725415 -10279241 - NTS_DM Other Other 0 240 38 1 727 757 11 0 11 chrUextra 18725415 18725508 -10279148 - NTS_DM Other Other -107 133 42 1 727 5659 16 6 0 chrUextra 18725608 18726298 -10278358 - STALKER4_I LTR Gypsy -203 6327 5634 1 727 3894 7 0 0 chrUextra 18726398 18726831 -10277825 - LSU-rRNA_Dme rRNA rRNA -890 3010 2578 1 727 2357 4 0 0 chrUextra 18726827 18727088 -10277568 - R2_DM LINE R2 -6 3601 3341 1 727 1849 64 12 0 chrUextra 18727188 18727438 -10277218 - R1_DM LINE R1 -5103 253 1 1 727 3403 25 2 7 chrUextra 18727471 18727878 -10276778 - R1_DM LINE R1 0 5356 4952 1 727 3153 7 138 1 chrUextra 18727978 18728668 -10275988 + Gypsy4_I LTR Gypsy 5163 5946 -342 1 727 1420 13 0 0 chrUextra 18728768 18728925 -10275731 - LSU-rRNA_Dme rRNA rRNA -1166 2734 2578 1 727 4809 6 0 0 chrUextra 18728927 18729458 -10275198 - R2_DM LINE R2 0 3607 3077 1 727 5920 14 6 0 chrUextra 18729558 18730248 -10274408 + ROO_I LTR Pao 2424 3117 -5139 1 727 344 265 114 96 chrUextra 18730467 18730747 -10273909 - Invader1_LTR LTR Gypsy -55 368 84 1 727 6262 6 1 0 chrUextra 18731138 18731828 -10272828 - LSU-rRNA_Dme rRNA rRNA -272 3628 2938 1 727 791 100 46 0 chrUextra 18731928 18732058 -10272598 - ARS406_DM Unknown Unknown -217 136 1 1 727 3054 170 18 14 chrUextra 18731951 18732607 -10272049 + SAR_DM Satellite Satellite 179 837 -635 1 727 231 61 30 0 chrUextra 18732585 18732618 -10272038 - ARS406_DM Unknown Unknown -164 189 156 1 727 5895 17 12 0 chrUextra 18732718 18733408 -10271248 + FW_DM LINE Jockey 2300 2997 -1695 1 727 2592 7 3 0 chrUextra 18733508 18733796 -10270860 - LSU-rRNA_Dme rRNA rRNA -1034 2866 2578 1 727 3606 5 0 0 chrUextra 18733799 18734198 -10270458 - R2_DM LINE R2 0 3607 3209 1 727 5901 29 0 1 chrUextra 18734298 18734988 -10269668 - R1_DM LINE R1 -1748 3608 2920 1 727 5805 12 0 0 chrUextra 18735088 18735778 -10268878 - QUASIMODO_I LTR Gypsy -1320 4740 4051 1 727 780 11 0 0 chrUextra 18735878 18735967 -10268689 - 5S_DM RNA RNA -46 89 1 1 727 1167 8 8 0 chrUextra 18736201 18736335 -10268321 - 5S_DM RNA RNA 0 135 1 1 727 3338 163 10 9 chrUextra 18736684 18737358 -10267298 + SAR_DM Satellite Satellite 332 1006 -466 1 727 5122 42 48 1 chrUextra 18737461 18738111 -10266545 - DMRT1C LINE R1 -105 5338 4659 1 727 266 81 0 0 chrUextra 18738109 18738146 -10266510 - DMRT1C LINE R1 -965 4478 4442 1 727 445 31 0 15 chrUextra 18738250 18738316 -10266340 + NTS_DM Other Other 137 201 -39 1 727 907 9 0 27 chrUextra 18738368 18738480 -10266176 + NTS_DM Other Other 25 133 -107 1 727 1287 24 0 6 chrUextra 18738480 18738645 -10266011 + NTS_DM Other Other 38 201 -39 1 727 21 57 0 0 chrUextra 18738645 18738680 -10265976 + AT_rich Low_complexity Low_complexity 1 35 0 1 727 840 9 9 36 chrUextra 18738706 18738818 -10265838 + NTS_DM Other Other 25 133 -107 1 727 851 0 0 0 chrUextra 18738818 18738914 -10265742 + NTS_DM Other Other 38 133 -107 1 727 694 120 0 8 chrUextra 18739038 18739156 -10265500 - ARS406_DM Unknown Unknown -236 117 1 1 727 3048 179 9 9 chrUextra 18739062 18739726 -10264930 + SAR_DM Satellite Satellite 195 858 -614 1 727 6077 13 0 0 chrUextra 18739828 18740518 -10264138 - FW_DM LINE Jockey -3554 1138 449 1 727 6023 1 0 3 chrUextra 18740618 18741308 -10263348 + QUASIMODO_I LTR Gypsy 2202 2889 -3171 1 727 3338 161 17 9 chrUextra 18741408 18742096 -10262560 - SAR_DM Satellite Satellite -400 1072 379 1 727 4969 38 115 4 chrUextra 18742198 18742886 -10261770 - TRANSIB2 DNA Transib -1202 1642 879 1 90 4595 31 35 5 chrUextra 18742990 18743567 -10261089 - PROTOP_A DNA P -511 594 1 1 728 5812 0 6 4 chrUextra 18743778 18744468 -10260188 + MAX_I LTR Pao 529 1219 -6695 1 728 6041 1 0 0 chrUextra 18744568 18745258 -10259398 + DM176_I LTR Gypsy 1890 2579 -3841 1 728 1934 29 0 0 chrUextra 18745358 18745596 -10259060 + PROTOP_A DNA P 388 625 -480 1 728 2535 38 3 25 chrUextra 18745596 18745919 -10258737 - NINJA_LTR LTR Pao -1 316 1 1 728 1077 39 0 0 chrUextra 18745919 18746048 -10258608 - NINJA_I LTR Pao 0 6011 5883 1 728 276 203 16 0 chrUextra 18746148 18746212 -10258444 + XDMR Unknown Unknown 297 361 0 1 728 2909 188 9 21 chrUextra 18746157 18746838 -10257818 - SAR_DM Satellite Satellite -353 1119 447 1 728 240 122 49 0 chrUextra 18747280 18747321 -10257335 + PROTOP DNA P 873 915 -3565 1 728 488 168 0 0 chrUextra 18747320 18747415 -10257241 + PROTOP DNA P 3959 4053 -427 1 728 532 184 73 0 chrUextra 18747425 18747561 -10257095 + PROTOP_A DNA P 762 905 -200 1 728 2075 283 16 7 chrUextra 18747729 18748405 -10256251 - FROGGER_I LTR Copia -334 1743 1062 1 728 369 183 14 0 chrUextra 18748518 18748589 -10256067 + Gypsy12A_LTR LTR Gypsy 2191 2262 -18 1 728 929 199 268 46 chrUextra 18748606 18748975 -10255681 + TART LINE telomeric 10041 10491 -3986 1 728 517 32 0 0 chrUextra 18749146 18749208 -10255448 + PROTOP_B DNA P 1 62 -1091 1 728 2828 198 13 28 chrUextra 18749311 18749998 -10254658 + SAR_DM Satellite Satellite 1 677 -208 1 728 28 48 0 0 chrUextra 18750139 18750181 -10254475 + AT_rich Low_complexity Low_complexity 1 42 0 1 728 514 119 36 0 chrUextra 18750454 18750538 -10254118 - NTS_DM Other Other -150 90 4 1 728 1111 7 0 21 chrUextra 18750648 18750788 -10253868 - NTS_DM Other Other -78 162 26 1 728 5807 10 9 4 chrUextra 18750890 18751578 -10253078 + DM176_I LTR Gypsy 479 1169 -5251 1 728 3200 177 9 7 chrUextra 18751685 18752368 -10252288 + SAR_DM Satellite Satellite 195 878 -594 1 728 2252 4 0 0 chrUextra 18752468 18752717 -10251939 - SSU-rRNA_Dme rRNA rRNA -1746 249 1 1 728 32 0 0 0 chrUextra 18752849 18752881 -10251775 + AT_rich Low_complexity Low_complexity 1 32 0 1 728 3154 172 12 9 chrUextra 18753260 18753927 -10250729 - SAR_DM Satellite Satellite -478 994 326 1 728 5695 0 2 2 chrUextra 18754048 18754675 -10249981 + SSU-rRNA_Dme rRNA rRNA 1369 1995 0 1 728 6089 3 1 4 chrUextra 18754838 18755528 -10249128 + R1_DM LINE R1 4373 5060 -296 1 728 5144 77 30 0 chrUextra 18755630 18756318 -10248338 - TART_B1 LINE telomeric -7289 3365 2657 1 728 1099 308 33 28 chrUextra 18756418 18756993 -10247663 + HMSBEAGLE_I LTR Gypsy 4186 4763 -1766 1 728 353 301 0 0 chrUextra 18756995 18757108 -10247548 + HMSBEAGLE_I LTR Gypsy 5207 5319 -1210 1 728 6251 1 1 0 chrUextra 18757208 18757898 -10246758 - R1_DM LINE R1 -2810 2546 1856 1 728 6265 0 0 0 chrUextra 18757998 18758688 -10245968 - G_DM LINE Jockey -785 3561 2872 1 728 32 0 0 0 chrUextra 18758915 18758947 -10245709 + AT_rich Low_complexity Low_complexity 1 32 0 1 728 28 48 0 0 chrUextra 18759275 18759317 -10245339 + AT_rich Low_complexity Low_complexity 1 42 0 1 728 1961 5 5 0 chrUextra 18759579 18759802 -10244854 - DIVER_LTR LTR Pao 0 224 1 1 728 4259 2 0 0 chrUextra 18759802 18760268 -10244388 - DIVER_I LTR Pao 0 5643 5178 1 728 366 0 23 0 chrUextra 18760368 18760411 -10244245 + ROO_I LTR Pao 8213 8256 0 1 728 3901 0 0 2 chrUextra 18760411 18760840 -10243816 + ROO_LTR LTR Pao 1 428 0 1 728 5687 0 0 38 chrUextra 18761157 18761846 -10242810 - LSU-rRNA_Dme rRNA rRNA -3111 789 127 1 728 1348 0 0 0 chrUextra 18761946 18762095 -10242561 - LSU-rRNA_Dme rRNA rRNA -3751 149 1 1 728 21 95 0 0 chrUextra 18762107 18762170 -10242486 + AT_rich Low_complexity Low_complexity 1 63 0 1 728 34 24 0 0 chrUextra 18762383 18762424 -10242232 + AT_rich Low_complexity Low_complexity 1 41 0 1 728 2895 0 3 3 chrUextra 18762737 18763058 -10241598 + SSU-rRNA_Dme rRNA rRNA 1675 1995 0 1 728 21 89 0 0 chrUextra 18763077 18763133 -10241523 + AT_rich Low_complexity Low_complexity 1 56 0 1 728 279 0 0 0 chrUextra 18763524 18763555 -10241101 + (TTCTC)n Simple_repeat Simple_repeat 5 35 0 1 728 192 40 0 0 chrUextra 18763562 18763587 -10241069 + (GAGAA)n Simple_repeat Simple_repeat 4 28 0 1 728 2581 89 10 50 chrUextra 18764313 18765001 -10239655 - DMSAT6 Satellite Satellite -33 660 1 1 728 3111 172 9 28 chrUextra 18765104 18765791 -10238865 - SAR_DM Satellite Satellite -369 1103 430 1 728 3324 168 7 7 chrUextra 18765894 18766572 -10238084 + SAR_DM Satellite Satellite 399 1076 -396 1 728 5022 42 2 0 chrUextra 18766680 18767279 -10237377 - Baggins1 LINE LOA -63 5390 4791 1 728 5672 2 0 36 chrUextra 18767469 18768158 -10236498 + LSU-rRNA_Dme rRNA rRNA 78 741 -3159 1 728 212 31 62 0 chrUextra 18768271 18768303 -10236353 + (TAAAG)n Simple_repeat Simple_repeat 2 35 0 1 728 6260 3 0 0 chrUextra 18769047 18769736 -10234920 - DOC LINE Jockey -490 4235 3547 1 728 3024 50 2 19 chrUextra 18769836 18770243 -10234413 + STALKER4_LTR LTR Gypsy 35 399 -3 1 728 31 58 0 0 chrUextra 18770331 18770383 -10234273 + AT_rich Low_complexity Low_complexity 1 52 0 1 728 655 201 0 0 chrUextra 18770384 18770523 -10234133 + STALKER4_I LTR Gypsy 235 373 -6157 1 728 6076 1 6 3 chrUextra 18770625 18771314 -10233342 - LSU-rRNA_Dme rRNA rRNA -2161 1739 1049 1 728 2155 304 3 1 chrUextra 18771438 18772101 -10232555 - Invader1_I LTR Gypsy -922 2264 1601 1 728 3309 20 5 15 chrUextra 18772203 18772611 -10232045 + BATUMI_I LTR Pao 6598 7001 -962 1 728 2297 8 0 0 chrUextra 18772637 18772892 -10231764 - BATUMI_I LTR Pao -1543 6420 6166 1 728 5378 61 1 6 chrUextra 18772992 18773681 -10230975 - BATUMI_I LTR Pao -3854 4109 3424 1 728 622 142 0 0 chrUextra 18773781 18773887 -10230769 - ARS406_DM Unknown Unknown -247 106 1 1 728 3033 187 13 9 chrUextra 18773794 18774470 -10230186 + SAR_DM Satellite Satellite 195 873 -599 1 728 2376 130 7 21 chrUextra 18774579 18775257 -10229399 + DMSAT6 Satellite Satellite 1 668 -3 1 728 3157 169 13 23 chrUextra 18775359 18776048 -10228608 - SAR_DM Satellite Satellite -372 1100 419 1 728 6230 1 0 0 chrUextra 18776148 18776837 -10227819 + DOC LINE Jockey 3117 3805 -920 1 728 6266 3 0 0 chrUextra 18776937 18777626 -10227030 + LSU-rRNA_Dme rRNA rRNA 1869 2557 -1343 1 728 2399 8 0 0 chrUextra 18777726 18777991 -10226665 - R1_DM LINE R1 -384 4972 4708 1 728 3992 0 0 0 chrUextra 18777989 18778415 -10226241 - LSU-rRNA_Dme rRNA rRNA -1249 2651 2226 1 728 5852 35 1 0 chrUextra 18779304 18779993 -10224663 - R1_DM LINE R1 -687 4669 3980 1 728 2914 0 3 0 chrUextra 18780093 18780406 -10224250 + SSU-rRNA_Dme rRNA rRNA 1682 1995 0 1 728 21 89 0 0 chrUextra 18780425 18780481 -10224175 + AT_rich Low_complexity Low_complexity 1 56 0 1 728 6107 3 1 0 chrUextra 18780882 18781571 -10223085 + HMSBEAGLE_I LTR Gypsy 56 745 -5784 1 728 1184 24 24 24 chrUextra 18782460 18782629 -10222027 + NTS_DM Other Other 72 240 0 1 728 1995 4 17 13 chrUextra 18782629 18782868 -10221788 + NTS_DM Other Other 1 240 0 1 728 1973 8 17 13 chrUextra 18782868 18783107 -10221549 + NTS_DM Other Other 1 240 0 1 728 392 0 0 0 chrUextra 18783107 18783149 -10221507 + NTS_DM Other Other 1 42 -198 1 728 4857 0 0 0 chrUextra 18783249 18783767 -10220889 + R2_DM LINE R2 3090 3607 0 1 728 1615 11 0 0 chrUextra 18783763 18783938 -10220718 + LSU-rRNA_Dme rRNA rRNA 2578 2752 -1148 1 728 5917 30 0 0 chrUextra 18784827 18785516 -10219140 + MDG1_I LTR Gypsy 3315 4003 -2593 1 728 792 21 11 0 chrUextra 18785616 18785710 -10218946 + ACCORD2_LTR LTR Gypsy 120 214 -1 1 728 5003 37 0 0 chrUextra 18785711 18786305 -10218351 + R1_DM LINE R1 2422 3015 -2341 1 728 662 53 21 0 chrUextra 18786405 18786499 -10218157 + (CTTAT)n Simple_repeat Simple_repeat 3 98 0 1 728 1203 15 0 0 chrUextra 18787314 18787449 -10217207 - 5S_DM RNA RNA 0 135 1 1 728 1226 15 0 0 chrUextra 18787673 18787808 -10216848 - 5S_DM RNA RNA 0 135 1 1 728 5997 13 1 1 chrUextra 18787983 18788672 -10215984 - R1_DM LINE R1 -1176 4180 3492 1 728 2048 41 30 0 chrUextra 18788772 18789043 -10215613 + PROTOP_A DNA P 235 513 -592 1 728 28 71 0 0 chrUextra 18789182 18789238 -10215418 + AT_rich Low_complexity Low_complexity 1 56 0 1 728 23 68 0 0 chrUextra 18789284 18789328 -10215328 + AT_rich Low_complexity Low_complexity 1 44 0 1 728 21 89 0 0 chrUextra 18789366 18789422 -10215234 + AT_rich Low_complexity Low_complexity 1 56 0 1 728 5811 26 46 0 chrUextra 18790350 18791039 -10213617 - R1_DM LINE R1 -3145 2211 1491 1 728 925 301 37 37 chrUextra 18791151 18791451 -10213205 + DM297_I LTR Gypsy 2372 2785 -3382 1 728 1651 19 19 0 chrUextra 18791451 18791665 -10212991 + TLD2 Unknown Unknown 1 218 0 1 728 925 301 37 37 chrUextra 18791665 18791812 -10212844 + DM297_I LTR Gypsy 2786 2991 -3176 1 728 5066 53 13 23 chrUextra 18791928 18792617 -10212039 - R1_DM LINE R1 -4276 1080 399 1 728 5804 34 4 1 chrUextra 18792717 18793406 -10211250 - R1_DM LINE R1 -302 5054 4364 1 728 221 208 38 0 chrUextra 18794081 18794134 -10210522 + (CATA)n Simple_repeat Simple_repeat 1 55 0 1 728 3026 188 19 16 chrUextra 18794295 18794976 -10209680 + SAR_DM Satellite Satellite 437 1119 -353 1 728 261 197 33 0 chrUextra 18794923 18794984 -10209672 - XDMR Unknown Unknown 0 361 299 1 728 2233 8 0 0 chrUextra 18795084 18795327 -10209329 + R1_DM LINE R1 5114 5356 0 1 728 3191 63 5 7 chrUextra 18795359 18795773 -10208883 + R1_DM LINE R1 1 413 -4943 1 728 1801 29 0 0 chrUextra 18795877 18796083 -10208573 + R1_DM LINE R1 5151 5356 0 1 728 3410 68 14 5 chrUextra 18796116 18796562 -10208094 + R1_DM LINE R1 1 450 -4906 1 728 3428 162 22 7 chrUextra 18796668 18797351 -10207305 + SAR_DM Satellite Satellite 326 1018 -454 1 728 454 122 0 13 chrUextra 18797554 18797629 -10207027 + DIVER_LTR LTR Pao 151 224 0 1 728 4144 16 2 0 chrUextra 18797650 18798140 -10206516 + PROTOP_A DNA P 221 711 -394 1 728 5964 10 1 13 chrUextra 18798243 18798926 -10205730 + Gypsy6_I LTR Gypsy 1443 2117 -4895 1 728 5815 32 1 0 chrUextra 18799818 18800507 -10204149 - MDG1_I LTR Gypsy -3771 2825 2136 1 728 6285 10 0 1 chrUextra 18800607 18801296 -10203360 + Gypsy6_I LTR Gypsy 4413 5100 -1912 1 728 3138 171 18 16 chrUextra 18801397 18802079 -10202577 - SAR_DM Satellite Satellite -610 862 180 1 728 3026 196 16 7 chrUextra 18802185 18802874 -10201782 - SAR_DM Satellite Satellite -396 1076 382 1 728 1371 23 119 6 chrUextra 18802974 18803150 -10201506 - DOC2_DM LINE Jockey -4588 205 10 1 728 2779 151 8 4 chrUextra 18803163 18803661 -10200995 + SAR_DM Satellite Satellite 380 879 -593 1 728 332 324 51 51 chrUextra 18803993 18804347 -10200309 + Invader3_I LTR Gypsy 2676 3029 -1859 1 728 6203 14 0 0 chrUextra 18804553 18805241 -10199415 + Gypsy_I LTR Gypsy 5779 6466 -41 1 728 5750 31 1 1 chrUextra 18805354 18806030 -10198626 - FW_DM LINE Jockey 0 4692 4017 1 728 1620 3 0 0 chrUextra 18806130 18806468 -10198188 + (TCTA)n Simple_repeat Simple_repeat 1 338 0 1 728 2488 100 30 25 chrUextra 18806919 18807608 -10197048 + DMSAT6 Satellite Satellite 1 692 -29 1 728 577 221 71 0 chrUextra 18807708 18807848 -10196808 - HETRP_DM Satellite Satellite -205 1667 1518 1 728 388 204 87 10 chrUextra 18807982 18808086 -10196570 + DNAREP1_DM LINE Penelope 67 178 -416 1 728 408 132 237 21 chrUextra 18808304 18808397 -10196259 + ROVER-LTR_DM LTR Gypsy 7 119 -248 1 728 6041 18 4 0 chrUextra 18808498 18809180 -10195476 + R1_DM LINE R1 1744 2428 -2928 1 728 2654 114 30 14 chrUextra 18809290 18809973 -10194683 - DMSAT6 Satellite Satellite -28 693 1 1 728 1699 103 43 14 chrUextra 18810075 18810352 -10194304 - MDG1_I LTR Gypsy -6311 285 1 1 728 2042 94 74 3 chrUextra 18810352 18810650 -10194006 - MDG1_LTR LTR Gypsy -30 412 94 1 728 339 105 0 0 chrUextra 18810652 18810709 -10193947 + (TTA)n Simple_repeat Simple_repeat 3 59 0 1 728 1284 271 26 28 chrUextra 18810899 18811552 -10193104 - STALKER4_I LTR Gypsy -3050 3480 2829 1 728 813 37 0 115 chrUextra 18811700 18811822 -10192834 - Baggins1 LINE LOA 0 5453 5346 1 728 27 29 0 0 chrUextra 18812145 18812179 -10192477 + AT_rich Low_complexity Low_complexity 1 34 0 1 728 938 183 102 15 chrUextra 18812847 18813052 -10191604 + DMLTR5 LTR Gypsy 44 266 0 1 728 376 49 65 16 chrUextra 18813051 18813113 -10191543 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 1 728 3167 185 9 17 chrUextra 18813231 18813920 -10190736 + SAR_DM Satellite Satellite 425 1107 -365 1 728 3024 195 9 17 chrUextra 18814020 18814708 -10189948 - SAR_DM Satellite Satellite -366 1106 425 1 728 5727 0 0 0 chrUextra 18814809 18815498 -10189158 - QUASIMODO_I LTR Gypsy -81 5979 5291 1 728 6174 16 0 4 chrUextra 18815598 18816287 -10188369 + Gypsy4_I LTR Gypsy 535 1220 -5068 1 728 6236 6 0 0 chrUextra 18816387 18817076 -10187580 + R1_DM LINE R1 1149 1837 -3519 1 728 2688 160 138 18 chrUextra 18817190 18817864 -10186792 - TART LINE telomeric -4745 9732 8978 1 728 4262 53 12 102 chrUextra 18817965 18818654 -10186002 + MDG1_I LTR Gypsy 1021 1647 -4949 1 728 1617 0 6 0 chrUextra 18818754 18818929 -10185727 + LSU-rRNA_Dme rRNA rRNA 3725 3900 0 1 728 268 196 0 19 chrUextra 18819030 18819082 -10185574 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 728 268 196 0 19 chrUextra 18819122 18819174 -10185482 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 728 268 196 0 19 chrUextra 18819214 18819266 -10185390 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 728 278 176 0 19 chrUextra 18819297 18819349 -10185307 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 728 22 56 0 0 chrUextra 18819362 18819398 -10185258 + AT_rich Low_complexity Low_complexity 1 36 0 1 728 766 193 0 7 chrUextra 18819755 18819901 -10184755 + DMLTR5 LTR Gypsy 122 266 0 1 728 376 49 65 16 chrUextra 18819900 18819962 -10184694 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 1 728 285 106 0 21 chrUextra 18819984 18820032 -10184624 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 728 646 27 0 0 chrUextra 18820332 18820406 -10184250 + ARS406_DM Unknown Unknown 116 189 -164 1 728 2602 180 71 34 chrUextra 18820343 18821021 -10183635 - SAR_DM Satellite Satellite -242 1230 528 1 728 5989 25 0 0 chrUextra 18821121 18821810 -10182846 - R1_DM LINE R1 -1750 3606 2918 1 728 6085 20 6 0 chrUextra 18821910 18822599 -10182057 - BURDOCK_I LTR Gypsy -2320 3540 2848 1 728 3509 164 10 9 chrUextra 18822699 18823388 -10181268 - SAR_DM Satellite Satellite -399 1073 384 1 728 614 166 371 0 chrUextra 18823501 18823679 -10180977 + Gypsy_I LTR Gypsy 5906 6149 -358 1 728 6210 0 3 1 chrUextra 18825066 18825755 -10178901 - R1_DM LINE R1 -3569 1787 1098 1 728 5865 14 12 3 chrUextra 18825855 18826544 -10178112 - R1_DM LINE R1 -1237 4119 3425 1 728 5804 47 0 1 chrUextra 18826644 18827333 -10177323 + BS2 LINE Jockey 3458 4145 -576 1 728 6307 0 1 0 chrUextra 18827433 18828122 -10176534 - ROO_I LTR Pao -5778 2478 1789 1 728 6199 4 1 1 chrUextra 18828222 18828911 -10175745 + R1_DM LINE R1 3641 4329 -1027 1 728 773 115 8 0 chrUextra 18829011 18829133 -10175523 - ARS406_DM Unknown Unknown -230 123 1 1 728 3208 267 38 49 chrUextra 18829027 18830479 -10174177 + SAR_DM Satellite Satellite 1 1436 -620 1 728 746 71 0 0 chrUextra 18830390 18830489 -10174167 - ARS406_DM Unknown Unknown -164 189 91 1 728 6323 1 1 3 chrUextra 18830589 18831278 -10173378 - SSU-rRNA_Dme rRNA rRNA -409 1586 899 1 728 3304 174 10 12 chrUextra 18831378 18832063 -10172593 + SAR_DM Satellite Satellite 275 958 -514 1 728 5785 20 3 6 chrUextra 18832167 18832856 -10171800 + STALKER4_I LTR Gypsy 1187 1873 -4657 1 728 862 102 0 0 chrUextra 18832957 18833085 -10171571 - ARS406_DM Unknown Unknown -225 128 1 1 728 3060 177 27 12 chrUextra 18832979 18833642 -10171014 + SAR_DM Satellite Satellite 180 852 -620 1 728 462 122 19 0 chrUextra 18833756 18833800 -10170856 - ACCORD2_I LTR Gypsy -6023 1189 1144 1 728 228 86 0 0 chrUextra 18833800 18833835 -10170821 + (TTA)n Simple_repeat Simple_repeat 2 36 0 1 728 462 122 19 0 chrUextra 18833835 18833897 -10170759 - ACCORD2_I LTR Gypsy -6069 1143 1082 1 728 3839 6 2 63 chrUextra 18833897 18834404 -10170252 + MICROPIA_LTR LTR Gypsy 1 476 0 1 728 260 0 0 0 chrUextra 18834404 18834434 -10170222 + MICROPIA_I LTR Gypsy 1 30 -4446 1 728 3843 0 0 0 chrUextra 18834534 18835009 -10169647 + DM176_I LTR Gypsy 5946 6420 0 1 728 1766 5 0 5 chrUextra 18835009 18835223 -10169433 + DM176_LTR LTR Gypsy 1 213 -294 1 728 5244 1 12 9 chrUextra 18835323 18836012 -10168644 + Stalker2_I LTR Gypsy 634 1324 -6078 1 728 189 0 0 0 chrUextra 18836113 18836134 -10168522 + (A)n Simple_repeat Simple_repeat 1 21 0 1 728 5130 47 1 1 chrUextra 18836134 18836801 -10167855 - R1_DM LINE R1 -3963 1393 727 1 728 5906 4 0 0 chrUextra 18836901 18837590 -10167066 - FW_DM LINE Jockey -1640 3052 2364 1 728 5624 12 1 1 chrUextra 18837690 18838379 -10166277 + DM176_I LTR Gypsy 1588 2276 -4144 1 728 195 69 0 0 chrUextra 18838519 18838548 -10166108 + (T)n Simple_repeat Simple_repeat 1 29 0 1 728 2585 202 5 11 chrUextra 18839268 18839929 -10164727 + SAR_DM Satellite Satellite 420 1076 -396 1 728 3155 172 9 7 chrUextra 18840058 18840745 -10163911 + SAR_DM Satellite Satellite 321 1008 -464 1 728 2829 187 7 7 chrUextra 18840856 18841535 -10163121 + SAR_DM Satellite Satellite 192 870 -602 1 728 28 71 0 0 chrUextra 18841706 18841762 -10162894 + AT_rich Low_complexity Low_complexity 1 56 0 1 728 3217 36 19 0 chrUextra 18841903 18842324 -10162332 - PROTOP_A DNA P -594 511 83 1 728 473 30 15 0 chrUextra 18842424 18842490 -10162166 - G5_DM LINE Jockey -188 4668 4602 1 728 2694 59 59 0 chrUextra 18842487 18842861 -10161795 - G5_DM LINE Jockey -489 4367 3972 1 728 21 0 0 0 chrUextra 18842892 18842913 -10161743 + AT_rich Low_complexity Low_complexity 1 21 0 1 728 5674 16 13 0 chrUextra 18843213 18843902 -10160754 + DM1731_I LTR Copia 284 981 -2995 1 728 5887 1 1 4 chrUextra 18844002 18844691 -10159965 - SSU-rRNA_Dme rRNA rRNA -555 1440 754 1 728 5712 3 0 3 chrUextra 18844791 18845480 -10159176 + ROO_I LTR Pao 2748 3434 -4822 1 728 3865 110 71 0 chrUextra 18845580 18846269 -10158387 - TART_B1 LINE telomeric -7967 2687 1950 1 728 4693 2 0 0 chrUextra 18846369 18846917 -10157739 + FW_DM LINE Jockey 4145 4692 0 1 728 1652 67 50 4 chrUextra 18847158 18847397 -10157259 + R1_DM LINE R1 1368 1617 -3739 1 728 3668 18 0 0 chrUextra 18847409 18847847 -10156809 + R1_DM LINE R1 2001 2438 -2918 1 728 3051 176 15 6 chrUextra 18847947 18848632 -10156024 + SAR_DM Satellite Satellite 378 1068 -404 1 728 288 85 23 58 chrUextra 18849028 18849115 -10155541 + A-rich Low_complexity Low_complexity 1 84 0 1 728 5837 1 0 0 chrUextra 18849525 18850212 -10154444 - DM297_I LTR Gypsy -4933 1234 548 1 728 2055 41 0 11 chrUextra 18850314 18850585 -10154071 - G2_DM LINE Jockey -1424 1678 1411 1 728 22 56 0 0 chrUextra 18850734 18850770 -10153886 + AT_rich Low_complexity Low_complexity 1 36 0 1 728 603 80 0 0 chrUextra 18850914 18851002 -10153654 + G2_DM LINE Jockey 2469 2556 -546 1 728 866 183 102 15 chrUextra 18851112 18851317 -10153339 + DMLTR5 LTR Gypsy 44 266 0 1 728 351 49 65 16 chrUextra 18851316 18851378 -10153278 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 1 728 262 106 0 21 chrUextra 18851400 18851448 -10153208 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 728 1406 11 16 16 chrUextra 18851892 18852080 -10152576 - DM297_LTR LTR Gypsy -226 188 1 1 728 1408 20 20 20 chrUextra 18852095 18852298 -10152358 + NTS_DM Other Other 38 240 0 1 728 1734 21 17 17 chrUextra 18852298 18852538 -10152118 + NTS_DM Other Other 1 240 0 1 728 358 23 0 0 chrUextra 18852538 18852581 -10152075 + NTS_DM Other Other 1 43 -197 1 728 5682 17 0 0 chrUextra 18852681 18853370 -10151286 + FW_DM LINE Jockey 868 1556 -3136 1 728 1391 18 0 0 chrUextra 18853470 18853635 -10151021 + PROTOP_A DNA P 941 1105 0 1 728 248 29 0 0 chrUextra 18853635 18853667 -10150989 - PROTOP_A DNA P -1073 32 1 1 728 2943 181 13 9 chrUextra 18854261 18854948 -10149708 + SAR_DM Satellite Satellite 229 918 -554 1 728 3219 15 2 5 chrUextra 18855048 18855453 -10149203 - R1_DM LINE R1 -4176 1180 777 1 728 2161 49 0 7 chrUextra 18855452 18855737 -10148919 - R1_DM LINE R1 -4838 518 236 1 728 2284 103 16 29 chrUextra 18856626 18857314 -10147342 + DMSAT6 Satellite Satellite 1 679 -97 1 728 4166 21 6 0 chrUextra 18857415 18857938 -10146718 + ACCORD2_I LTR Gypsy 6677 7202 -10 1 728 1306 25 0 24 chrUextra 18857938 18858104 -10146552 + ACCORD2_LTR LTR Gypsy 1 162 -53 1 728 5888 7 1 0 chrUextra 18858204 18858893 -10145763 - R1_DM LINE R1 -2545 2811 2122 1 728 5964 1 0 1 chrUextra 18858993 18859682 -10144974 - ROO_I LTR Pao -531 7725 7038 1 728 5875 0 1 1 chrUextra 18859782 18860471 -10144185 + ROO_I LTR Pao 5308 5996 -2260 1 728 1559 49 0 0 chrUextra 18860575 18860778 -10143878 - MDG1_I LTR Gypsy -2554 4042 3840 1 728 2011 55 0 4 chrUextra 18860769 18861043 -10143613 - MDG1_I LTR Gypsy -2881 3715 3443 1 728 1623 59 0 0 chrUextra 18861039 18861260 -10143396 - MDG1_I LTR Gypsy -3922 2674 2454 1 728 2828 180 11 8 chrUextra 18861361 18862017 -10142639 - SAR_DM Satellite Satellite -620 852 195 1 728 717 112 8 0 chrUextra 18861924 18862049 -10142607 + ARS406_DM Unknown Unknown 1 126 -227 1 728 4153 22 60 7 chrUextra 18862149 18862838 -10141818 - R1_DM LINE R1 -1713 3643 2919 1 728 1592 37 0 0 chrUextra 18862938 18863153 -10141503 - BATUMI_I LTR Pao -446 7517 7303 1 728 3351 34 9 11 chrUextra 18863176 18863627 -10141029 + BATUMI_I LTR Pao 6427 6876 -1087 1 728 2787 172 54 20 chrUextra 18863728 18864416 -10140240 + SAR_DM Satellite Satellite 1 711 -208 1 728 5590 19 28 1 chrUextra 18864516 18865205 -10139451 + FW_DM LINE Jockey 3843 4549 -143 1 728 5871 0 0 1 chrUextra 18865305 18865994 -10138662 + ROO_I LTR Pao 6681 7368 -888 1 728 1392 288 31 28 chrUextra 18866179 18866783 -10137873 + Gypsy_DS LTR Gypsy 641 1827 -5695 1 728 1773 0 18 13 chrUextra 18866883 18867112 -10137544 - NTS_DM Other Other -10 230 1 1 728 1850 4 17 13 chrUextra 18867112 18867351 -10137305 - NTS_DM Other Other 0 240 1 1 728 1022 37 24 30 chrUextra 18867351 18867520 -10137136 - NTS_DM Other Other 0 240 73 1 728 264 64 0 21 chrUextra 18867524 18867572 -10137084 - NTS_DM Other Other -88 152 106 1 728 5706 1 0 13 chrUextra 18867672 18868360 -10136296 - DOC LINE Jockey -3554 1171 493 1 728 255 262 68 95 chrUextra 18868939 18869129 -10135527 - Invader1_LTR LTR Gypsy -55 368 184 1 728 353 41 20 0 chrUextra 18869250 18869299 -10135357 + ARS406_DM Unknown Unknown 140 189 -164 1 728 2951 177 8 8 chrUextra 18869256 18869923 -10134733 - SAR_DM Satellite Satellite -614 858 192 1 728 671 116 0 0 chrUextra 18869827 18869939 -10134717 + ARS406_DM Unknown Unknown 1 112 -241 1 728 5704 17 0 0 chrUextra 18870039 18870728 -10133928 - DMRT1B LINE R1 -598 4585 3897 1 728 5853 1 1 0 chrUextra 18870828 18871517 -10133139 + STALKER4_I LTR Gypsy 3309 3998 -2532 1 728 3360 52 65 0 chrUextra 18871617 18872306 -10132350 - PROTOP DNA P -285 820 219 1 728 2954 162 22 16 chrUextra 18872406 18873095 -10131561 + SAR_DM Satellite Satellite 293 985 -487 1 728 2335 203 20 7 chrUextra 18873201 18873882 -10130774 + SAR_DM Satellite Satellite 1 690 -416 1 728 1257 26 20 30 chrUextra 18873985 18874182 -10130474 - NTS_DM Other Other -8 232 38 1 728 817 0 0 0 chrUextra 18874182 18874278 -10130378 - NTS_DM Other Other -107 133 38 1 11 832 9 9 27 chrUextra 18874278 18874389 -10130267 - NTS_DM Other Other -107 133 25 1 729 21 57 0 0 chrUextra 18874415 18874450 -10130206 + AT_rich Low_complexity Low_complexity 1 35 0 1 729 1229 24 0 6 chrUextra 18874450 18874615 -10130041 - NTS_DM Other Other -39 201 38 1 729 430 17 0 0 chrUextra 18874615 18874673 -10129983 - NTS_DM Other Other -107 133 76 1 729 5904 9 0 0 chrUextra 18874773 18875462 -10129194 + Gypsy4_I LTR Gypsy 3604 4292 -1996 1 729 34 24 0 0 chrUextra 18875643 18875684 -10128972 + AT_rich Low_complexity Low_complexity 1 41 0 1 729 5894 1 0 1 chrUextra 18876351 18877040 -10127616 + FW_DM LINE Jockey 1497 2184 -2508 1 729 5591 10 1 0 chrUextra 18877140 18877829 -10126827 + IDEFIX_I LTR Gypsy 4294 4983 -645 1 729 2553 3 0 3 chrUextra 18877929 18878225 -10126431 - R2_DM LINE R2 -3310 297 3 1 729 3425 2 0 0 chrUextra 18878223 18878618 -10126038 - LSU-rRNA_Dme rRNA rRNA -1319 2581 2187 1 729 1612 19 0 5 chrUextra 18878718 18878924 -10125732 - NTS_DM Other Other -35 205 1 1 729 1734 21 17 17 chrUextra 18878924 18879164 -10125492 - NTS_DM Other Other 0 240 1 1 729 1391 25 20 20 chrUextra 18879164 18879367 -10125289 - NTS_DM Other Other 0 240 38 1 729 302 0 0 0 chrUextra 18879367 18879407 -10125249 - NTS_DM Other Other -107 133 94 1 729 3102 184 40 39 chrUextra 18879507 18880946 -10123710 - SAR_DM Satellite Satellite -570 1440 1 1 729 684 277 38 26 chrUextra 18880644 18880985 -10123671 + XDMR_DM Unknown Unknown 6 350 -10 1 729 4189 14 37 0 chrUextra 18881104 18881617 -10123039 - PROTOP_A DNA P -573 532 1 1 729 21 57 0 0 chrUextra 18881879 18881914 -10122742 + AT_rich Low_complexity Low_complexity 1 35 0 1 729 255 125 0 0 chrUextra 18881927 18881967 -10122689 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 729 246 150 0 0 chrUextra 18882010 18882050 -10122606 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 729 246 150 0 0 chrUextra 18882102 18882142 -10122514 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 729 246 150 0 0 chrUextra 18882194 18882234 -10122422 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 729 22 56 0 0 chrUextra 18882239 18882275 -10122381 + AT_rich Low_complexity Low_complexity 1 36 0 1 729 1892 0 0 0 chrUextra 18882347 18882563 -10122093 - LSU-rRNA_Dme rRNA rRNA 0 3900 3685 1 729 5760 13 0 0 chrUextra 18882667 18883352 -10121304 + STALKER4_I LTR Gypsy 4387 5071 -1459 1 729 4774 7 0 0 chrUextra 18883452 18884006 -10120650 + LSU-rRNA_Dme rRNA rRNA 2031 2584 -1316 1 729 1092 8 8 0 chrUextra 18884010 18884141 -10120515 + R2_DM LINE R2 3 134 -3473 1 729 272 0 0 0 chrUextra 18884241 18884273 -10120383 + R1_DM LINE R1 4565 4596 -760 1 729 5651 3 0 0 chrUextra 18884280 18884930 -10119726 - DMRT1B LINE R1 0 5183 4534 1 729 28 48 0 0 chrUextra 18885060 18885102 -10119554 + AT_rich Low_complexity Low_complexity 1 42 0 1 729 2209 173 49 32 chrUextra 18885109 18885665 -10118991 + Stalker2_I LTR Gypsy 291 855 -6547 1 729 1391 108 0 9 chrUextra 18885833 18886047 -10118609 + BS2 LINE Jockey 250 461 -4260 1 729 3167 43 2 19 chrUextra 18886079 18886508 -10118148 - G5A_DM LINE Jockey 0 2841 2420 1 729 5950 3 0 0 chrUextra 18886609 18887297 -10117359 - R1_DM LINE R1 -2936 2420 1733 1 729 5610 0 3 1 chrUextra 18887439 18888086 -10116570 - LSU-rRNA_Dme rRNA rRNA 0 3900 3253 1 729 5340 2 0 0 chrUextra 18888191 18888810 -10115846 + QUASIMODO_LTR LTR Gypsy 40 658 0 1 729 5984 1 1 1 chrUextra 18888975 18889664 -10114992 - LSU-rRNA_Dme rRNA rRNA -381 3519 2831 1 729 5861 0 3 1 chrUextra 18889764 18890440 -10114216 + LSU-rRNA_Dme rRNA rRNA 3224 3900 0 1 729 3884 68 73 22 chrUextra 18890553 18891242 -10113414 - STALKER4_I LTR Gypsy -5006 1524 801 1 729 1468 6 0 6 chrUextra 18891342 18891517 -10113139 + STALKER4_LTR LTR Gypsy 229 402 0 1 729 2042 117 54 41 chrUextra 18891559 18892022 -10112634 + DMSAT6 Satellite Satellite 1 469 -1 1 729 3130 168 10 9 chrUextra 18892131 18892820 -10111836 + SAR_DM Satellite Satellite 379 1068 -404 1 729 5982 3 0 0 chrUextra 18892920 18893609 -10111047 + DMRT1B LINE R1 3112 3800 -1383 1 729 705 116 0 0 chrUextra 18893709 18893830 -10110826 - ARS406_DM Unknown Unknown -232 121 1 1 729 2833 180 11 8 chrUextra 18893737 18894393 -10110263 + SAR_DM Satellite Satellite 195 852 -620 1 729 290 51 0 0 chrUextra 18894358 18894397 -10110259 - ARS406_DM Unknown Unknown -166 187 149 1 729 5843 7 0 1 chrUextra 18894498 18895187 -10109469 + R1_DM LINE R1 4656 5343 -13 1 729 2821 175 9 25 chrUextra 18895287 18895973 -10108683 + SAR_DM Satellite Satellite 439 1113 -359 1 729 2718 110 102 45 chrUextra 18896095 18896763 -10107893 - BATUMI_I LTR Pao -7194 769 64 1 729 5869 1 0 0 chrUextra 18896863 18897551 -10107105 + ROO_I LTR Pao 3639 4326 -3930 1 729 34 24 0 0 chrUextra 18897681 18897722 -10106934 + AT_rich Low_complexity Low_complexity 1 41 0 1 729 21 95 0 0 chrUextra 18897936 18897999 -10106657 + AT_rich Low_complexity Low_complexity 1 63 0 1 729 1930 0 0 0 chrUextra 18898011 18898233 -10106423 + LSU-rRNA_Dme rRNA rRNA 1 222 -3678 1 729 755 0 0 0 chrUextra 18898251 18898339 -10106317 + R2_DM LINE R2 1481 1568 -2039 1 729 4586 4 22 0 chrUextra 18898439 18898991 -10105665 - HMSBEAGLE_I LTR Gypsy -5965 564 1 1 729 1168 15 0 0 chrUextra 18898990 18899127 -10105529 - DMLTR5 LTR Gypsy 0 266 130 1 729 5821 1 3 0 chrUextra 18899227 18899915 -10104741 - STALKER4_I LTR Gypsy -701 5829 5140 1 729 2927 196 26 27 chrUextra 18900015 18900703 -10103953 - SAR_DM Satellite Satellite -1072 687 1 1 729 5802 4 0 0 chrUextra 18900803 18901491 -10103165 + DM297_I LTR Gypsy 4682 5369 -798 1 729 1575 247 32 62 chrUextra 18901596 18902257 -10102399 + Gypsy12_LTR LTR Gypsy 615 1255 -1081 1 729 5863 9 3 0 chrUextra 18902379 18903067 -10101589 + Gypsy4_I LTR Gypsy 2644 3333 -2955 1 729 5871 3 1 1 chrUextra 18903167 18903855 -10100801 + R1_DM LINE R1 4306 4993 -363 1 729 5827 0 1 0 chrUextra 18904743 18905431 -10099225 + LSU-rRNA_Dme rRNA rRNA 350 1038 -2862 1 729 1044 0 0 0 chrUextra 18905531 18905661 -10098995 + ROO_I LTR Pao 5807 5936 -2320 1 729 4705 0 23 0 chrUextra 18905661 18906219 -10098437 + ROO_I LTR Pao 6738 7308 -948 1 729 2544 191 9 23 chrUextra 18906319 18906982 -10097674 + SAR_DM Satellite Satellite 465 1118 -354 1 729 410 202 0 18 chrUextra 18906896 18907007 -10097649 - XDMR_DM Unknown Unknown 0 360 252 1 729 5525 7 1 1 chrUextra 18907107 18907779 -10096877 + DM297_I LTR Gypsy 3211 3882 -2285 1 729 2324 201 70 17 chrUextra 18907895 18908583 -10096073 - SAR_DM Satellite Satellite -594 724 1 1 729 533 197 0 0 chrUextra 18908683 18908800 -10095856 - ARS406_DM Unknown Unknown -236 117 1 1 729 2507 155 26 12 chrUextra 18908699 18909364 -10095292 + SAR_DM Satellite Satellite 1 674 -426 1 729 5922 6 0 0 chrUextra 18909471 18910159 -10094497 + PROTOP DNA P 2308 2995 -1485 1 729 2935 184 9 10 chrUextra 18910259 18910947 -10093709 - SAR_DM Satellite Satellite -489 983 297 1 729 2380 204 25 16 chrUextra 18911048 18911735 -10092921 - SAR_DM Satellite Satellite -313 1159 467 1 729 2150 23 0 4 chrUextra 18911835 18912096 -10092560 + PROTOP DNA P 4221 4480 0 1 729 351 308 15 25 chrUextra 18912191 18912394 -10092262 + Gypsy7_I LTR Gypsy 1166 1366 -3618 1 729 625 14 0 0 chrUextra 18912623 18912697 -10091959 + DM176_LTR LTR Gypsy 210 283 -224 1 729 2016 20 16 0 chrUextra 18912698 18912951 -10091705 + DM176_LTR LTR Gypsy 251 507 0 1 729 2863 17 3 11 chrUextra 18912951 18913311 -10091345 + DM176_I LTR Gypsy 1 357 -6063 1 729 4413 84 1 38 chrUextra 18913415 18914099 -10090557 + Gypsy12_I LTR Gypsy 646 1304 -4242 1 729 3210 166 11 12 chrUextra 18914201 18914887 -10089769 - SAR_DM Satellite Satellite -1109 685 1 1 729 1736 38 8 29 chrUextra 18915916 18916162 -10088494 - BATUMI_LTR LTR Pao 0 272 32 1 729 237 159 73 73 chrUextra 18916271 18916339 -10088317 + Gypsy4_I LTR Gypsy 4324 4391 -1897 1 729 4610 52 24 0 chrUextra 18916591 18917185 -10087471 + IDEFIX_I LTR Gypsy 21 614 -5014 1 729 183 42 0 0 chrUextra 18917185 18917209 -10087447 + (TTA)n Simple_repeat Simple_repeat 3 26 0 1 729 4610 52 24 0 chrUextra 18917209 18917251 -10087405 + IDEFIX_I LTR Gypsy 615 670 -4958 1 729 868 169 63 18 chrUextra 18917351 18917574 -10087082 - Gypsy12_LTR LTR Gypsy -321 2015 1783 1 729 1650 181 96 33 chrUextra 18917562 18918020 -10086636 - Gypsy12_LTR LTR Gypsy -778 1558 1072 1 729 3555 65 51 112 chrUextra 18918139 18918827 -10085829 - MDG1_I LTR Gypsy -4947 1649 1004 1 729 2963 96 221 33 chrUextra 18918927 18919615 -10085041 - STALKER4_I LTR Gypsy -5104 1426 610 1 729 5938 7 0 0 chrUextra 18919715 18920403 -10084253 + R2_DM LINE R2 2612 3299 -308 1 729 5893 6 0 0 chrUextra 18920503 18921191 -10083465 - R1_DM LINE R1 -46 5310 4623 1 729 21 89 0 0 chrUextra 18921405 18921461 -10083195 + AT_rich Low_complexity Low_complexity 1 56 0 1 729 29 47 0 0 chrUextra 18921499 18921542 -10083114 + AT_rich Low_complexity Low_complexity 1 43 0 1 729 22 80 0 0 chrUextra 18921588 18921638 -10083018 + AT_rich Low_complexity Low_complexity 1 50 0 1 729 5425 29 7 3 chrUextra 18922082 18922767 -10081889 + MDG1_I LTR Gypsy 1558 2245 -4351 1 729 3103 171 9 10 chrUextra 18922869 18923553 -10081103 - SAR_DM Satellite Satellite -464 1008 326 1 729 26 30 0 0 chrUextra 18923701 18923734 -10080922 + AT_rich Low_complexity Low_complexity 1 33 0 1 729 1888 39 0 0 chrUextra 18924111 18924343 -10080313 - PROTOP DNA P 0 4480 4249 1 729 5862 1 1 4 chrUextra 18924443 18925131 -10079525 - LSU-rRNA_Dme rRNA rRNA -2402 1498 813 1 729 3024 180 9 13 chrUextra 18925231 18925919 -10078737 + SAR_DM Satellite Satellite 333 1017 -455 1 729 5680 20 0 3 chrUextra 18926019 18926707 -10077949 - G_DM LINE Jockey -1254 3092 2407 1 729 2892 179 12 16 chrUextra 18926808 18927495 -10077161 - SAR_DM Satellite Satellite -577 895 212 1 729 5913 3 3 0 chrUextra 18927595 18928283 -10076373 + DMRT1B LINE R1 3021 3710 -1473 1 729 2314 92 4 41 chrUextra 18928384 18929071 -10075585 + DMSAT6 Satellite Satellite 1 661 -85 1 729 5958 3 1 0 chrUextra 18929171 18929859 -10074797 + R2_DM LINE R2 694 1382 -2225 1 729 5616 18 3 4 chrUextra 18929959 18930647 -10074009 + Gypsy4_I LTR Gypsy 4288 4974 -1314 1 729 244 128 0 21 chrUextra 18931332 18931380 -10073276 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 729 2460 87 41 21 chrUextra 18931543 18932223 -10072433 - DMSAT6 Satellite Satellite -64 694 1 1 729 2963 164 23 13 chrUextra 18933113 18933799 -10070857 + SAR_DM Satellite Satellite 376 1068 -404 1 729 3065 169 19 10 chrUextra 18933899 18934587 -10070069 + SAR_DM Satellite Satellite 293 986 -486 1 729 286 282 107 89 chrUextra 18936326 18936606 -10068050 + Invader1_LTR LTR Gypsy 84 368 -55 1 729 2900 171 39 13 chrUextra 18937051 18937739 -10066917 - SAR_DM Satellite Satellite -446 1026 321 1 729 5885 3 1 0 chrUextra 18937839 18938527 -10066129 + DMRT1B LINE R1 3767 4455 -728 1 729 5684 23 1 0 chrUextra 18939415 18940103 -10064553 + R1_DM LINE R1 4140 4828 -528 1 729 5779 3 0 1 chrUextra 18940203 18940891 -10063765 + ROO_I LTR Pao 1570 2256 -6000 1 729 5829 3 1 4 chrUextra 18940991 18941679 -10062977 + LSU-rRNA_Dme rRNA rRNA 785 1470 -2430 1 729 801 102 0 0 chrUextra 18942567 18942694 -10061962 - ARS406_DM Unknown Unknown -226 127 1 1 729 2847 178 9 9 chrUextra 18942601 18943254 -10061402 + SAR_DM Satellite Satellite 195 847 -625 1 729 3004 190 12 15 chrUextra 18943358 18944026 -10060630 - SAR_DM Satellite Satellite -615 857 192 1 729 799 80 9 0 chrUextra 18943931 18944043 -10060613 + ARS406_DM Unknown Unknown 1 113 -240 1 729 6018 29 3 0 chrUextra 18944143 18944831 -10059825 + MAX_I LTR Pao 3834 4523 -3391 1 729 6250 1 0 0 chrUextra 18944931 18945619 -10059037 - R1_DM LINE R1 -2105 3251 2564 1 729 5950 29 1 0 chrUextra 18945719 18946407 -10058249 + R1_DM LINE R1 4442 5130 -226 1 729 1036 0 9 0 chrUextra 18946507 18946623 -10058033 + 5S_DM RNA RNA 19 135 0 1 729 1246 0 0 0 chrUextra 18946854 18946989 -10057667 + 5S_DM RNA RNA 1 135 0 1 729 3407 170 13 15 chrUextra 18947295 18947982 -10056674 + SAR_DM Satellite Satellite 381 1066 -406 1 729 3546 44 25 0 chrUextra 18948872 18949306 -10055350 - ROO_I LTR Pao -338 7918 7474 1 729 2166 15 100 0 chrUextra 18949299 18949559 -10055097 - ROO_I LTR Pao -1000 7256 6971 1 729 3337 173 12 12 chrUextra 18949663 18950346 -10054310 + SAR_DM Satellite Satellite 364 1046 -426 1 729 921 10 0 0 chrUextra 18950447 18950548 -10054108 - DM1731_LTR LTR Copia -235 101 1 1 729 5225 3 5 10 chrUextra 18950548 18951135 -10053521 - DM1731_I LTR Copia 0 3976 3393 1 729 660 0 0 25 chrUextra 18951235 18951315 -10053341 + SSU-rRNA_Dme rRNA rRNA 1918 1995 0 1 729 21 89 0 0 chrUextra 18951334 18951390 -10053266 + AT_rich Low_complexity Low_complexity 1 56 0 1 729 5991 22 1 0 chrUextra 18952811 18953499 -10051157 + R1_DM LINE R1 2958 3646 -1710 1 729 759 11 0 0 chrUextra 18953599 18953687 -10050969 + (TCTTG)n Simple_repeat Simple_repeat 3 90 0 1 729 1847 38 8 25 chrUextra 18954387 18954632 -10050024 + BATUMI_I LTR Pao 7044 7284 -679 1 729 2617 88 86 27 chrUextra 18954632 18955075 -10049581 + BATUMI_I LTR Pao 1 469 -7494 1 729 34 24 0 0 chrUextra 18955286 18955327 -10049329 + AT_rich Low_complexity Low_complexity 1 41 0 1 729 5544 37 4 10 chrUextra 18955964 18956651 -10048005 - DMRT1B LINE R1 -37 5146 4464 1 729 5289 44 44 16 chrUextra 18956751 18957439 -10047217 + ROO_I LTR Pao 1232 1938 -6318 1 729 405 0 0 0 chrUextra 18957539 18957584 -10047072 + (GAGAA)n Simple_repeat Simple_repeat 2 46 0 1 729 5981 20 4 0 chrUextra 18958327 18959015 -10045641 + ROO_I LTR Pao 3541 4231 -4025 1 729 3329 181 9 7 chrUextra 18959116 18959800 -10044856 - SAR_DM Satellite Satellite -593 879 195 1 729 6196 1 0 0 chrUextra 18960691 18961379 -10043277 + DM297_I LTR Gypsy 581 1268 -4899 1 729 5704 20 1 4 chrUextra 18961479 18962167 -10042489 + PROTOP_A DNA P 167 852 -253 1 729 6109 10 3 0 chrUextra 18962267 18962955 -10041701 + STALKER4_I LTR Gypsy 4516 5205 -1325 1 729 6324 0 0 0 chrUextra 18963055 18963743 -10040913 - DMRT1A LINE R1 -2997 2186 1499 1 729 2927 184 17 26 chrUextra 18963843 18964531 -10040125 + SAR_DM Satellite Satellite 465 1146 -326 1 729 1005 50 0 0 chrUextra 18964631 18964750 -10039906 + PROTOP_A DNA P 68 186 -919 1 729 3968 9 63 0 chrUextra 18964764 18965319 -10039337 + PROTOP_A DNA P 233 822 -283 1 729 3235 27 3 0 chrUextra 18965421 18965789 -10038867 - DIVER2_LTR LTR Pao -16 369 1 1 729 2831 16 0 0 chrUextra 18965789 18966107 -10038549 - DIVER2_I LTR Pao 0 4147 3830 1 729 5493 22 86 1 chrUextra 18966208 18966895 -10037761 + STALKER4_I LTR Gypsy 2441 3185 -3345 1 729 4561 66 0 26 chrUextra 18966995 18967601 -10037055 + CIRCE LINE Composite 2246 2835 -3521 1 729 581 51 0 25 chrUextra 18967603 18967683 -10036973 + CIRCE LINE Composite 2961 3038 -3318 1 729 3467 172 9 10 chrUextra 18967783 18968471 -10036185 - SAR_DM Satellite Satellite -404 1068 382 1 729 6087 29 0 0 chrUextra 18968571 18969259 -10035397 + DIVER_I LTR Pao 4706 5393 -250 1 729 6418 1 0 0 chrUextra 18969359 18970047 -10034609 + LSU-rRNA_Dme rRNA rRNA 2214 2901 -999 1 729 2419 234 12 53 chrUextra 18970156 18970833 -10033823 + Gypsy12_LTR LTR Gypsy 105 753 -1583 1 729 5835 33 0 0 chrUextra 18970935 18971623 -10033033 - R1_DM LINE R1 -1816 3540 2853 1 729 679 67 0 0 chrUextra 18971723 18971813 -10032843 + R1_DM LINE R1 523 612 -4744 1 729 3459 46 60 2 chrUextra 18971798 18972411 -10032245 + R1_DM LINE R1 1384 2032 -3324 1 729 1917 145 22 35 chrUextra 18972511 18972910 -10031746 - STALKER4_I LTR Gypsy -5792 738 228 1 729 22 0 0 0 chrUextra 18972928 18972950 -10031706 + AT_rich Low_complexity Low_complexity 1 22 0 1 729 819 107 21 12 chrUextra 18973068 18973198 -10031458 - STALKER4_LTR LTR Gypsy -23 379 227 1 729 6287 0 0 1 chrUextra 18973299 18973987 -10030669 + HETA LINE telomeric 1817 2503 -3578 1 729 6264 10 1 0 chrUextra 18974087 18974775 -10029881 - Copia2_I LTR Copia -1990 2172 1484 1 729 819 31 0 30 chrUextra 18974875 18974974 -10029682 - R1_DM LINE R1 -448 4908 4813 1 729 5628 2 0 0 chrUextra 18974960 18975563 -10029093 - LSU-rRNA_Dme rRNA rRNA -1263 2637 2035 1 729 312 159 12 24 chrUextra 18975664 18975748 -10028908 - R1_DM LINE R1 -4700 656 574 1 729 1055 108 29 29 chrUextra 18975749 18975921 -10028735 - R1_DM LINE R1 -5184 172 1 1 729 2080 65 3 35 chrUextra 18975939 18976228 -10028428 + Gypsy6A_LTR LTR Gypsy 71 350 -70 1 729 793 82 41 0 chrUextra 18976227 18976349 -10028307 - Stalker2_I LTR Gypsy -4238 3164 3038 1 729 3106 183 12 13 chrUextra 18976451 18977139 -10027517 - SAR_DM Satellite Satellite -546 926 240 1 729 5784 9 36 0 chrUextra 18977239 18977927 -10026729 + Invader2_I LTR Gypsy 33 745 -3847 1 729 880 19 9 27 chrUextra 18978029 18978140 -10026516 - NTS_DM Other Other -107 133 25 1 729 21 57 0 0 chrUextra 18978166 18978201 -10026455 + AT_rich Low_complexity Low_complexity 1 35 0 1 729 1350 18 0 6 chrUextra 18978201 18978366 -10026290 - NTS_DM Other Other -39 201 38 1 729 936 9 0 27 chrUextra 18978366 18978478 -10026178 - NTS_DM Other Other -107 133 25 1 729 1350 18 0 6 chrUextra 18978530 18978695 -10025961 - NTS_DM Other Other -39 201 38 1 729 6269 6 0 0 chrUextra 18978815 18979503 -10025153 - IVK_DM LINE I -2287 3115 2428 1 729 203 152 0 0 chrUextra 18979895 18979928 -10024728 + CT-rich Low_complexity Low_complexity 1 33 0 1 729 6150 6 1 4 chrUextra 18980391 18981079 -10023577 - IDEFIX_I LTR Gypsy -2687 2941 2256 1 729 1741 35 0 0 chrUextra 18981179 18981380 -10023276 - PROTOP_A DNA P -904 201 1 1 729 1887 23 0 0 chrUextra 18981380 18981597 -10023059 - Invader6_LTR LTR Gypsy -165 228 12 1 729 690 25 0 0 chrUextra 18981589 18981669 -10022987 - Invader6_I LTR Gypsy -10 4089 4010 1 729 1431 30 0 0 chrUextra 18981699 18981867 -10022789 - Invader6_I LTR Gypsy -88 4011 3844 1 729 2415 4 0 0 chrUextra 18981967 18982228 -10022428 - STALKER4_LTR LTR Gypsy -141 261 1 1 729 1298 130 0 0 chrUextra 18982228 18982427 -10022229 + ROVER-I_DM LTR Gypsy 5110 5308 -1276 1 729 754 218 0 11 chrUextra 18982462 18982638 -10022018 + ROVER-I_DM LTR Gypsy 5990 6163 -421 1 729 6201 7 0 1 chrUextra 18982755 18983443 -10021213 - R1_DM LINE R1 -3003 2353 1667 1 729 6067 9 0 0 chrUextra 18984331 18985019 -10019637 - DMRT1B LINE R1 -3980 1203 516 1 729 6243 4 0 1 chrUextra 18985119 18985807 -10018849 + DMRT1B LINE R1 108 794 -4389 1 729 536 300 25 51 chrUextra 18985922 18986196 -10018460 - HMSBEAGLE_I LTR Gypsy -3619 2910 2644 1 729 457 209 9 9 chrUextra 18986465 18986576 -10018080 - HMSBEAGLE_I LTR Gypsy -4097 2432 2322 1 729 6423 0 1 0 chrUextra 18986695 18987383 -10017273 + SSU-rRNA_Dme rRNA rRNA 386 1074 -921 1 729 1068 162 97 0 chrUextra 18987483 18987699 -10016957 + MAX_LTR LTR Pao 85 321 0 1 729 2868 47 38 88 chrUextra 18987699 18988144 -10016512 + MAX_I LTR Pao 1 423 -7491 1 729 4123 87 141 41 chrUextra 18988271 18988959 -10015697 + Gypsy12_I LTR Gypsy 504 1260 -4286 1 729 5848 1 1 10 chrUextra 18989062 18989747 -10014909 + DM412 LTR Gypsy 1498 2176 -4721 1 729 3259 185 7 9 chrUextra 18989858 18990535 -10014121 - SAR_DM Satellite Satellite -535 937 262 1 729 1236 0 0 7 chrUextra 18990635 18990771 -10013885 - LSU-rRNA_Dme rRNA rRNA -1978 1922 1788 1 729 4523 2 6 6 chrUextra 18990812 18991323 -10013333 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1281 1 729 1592 169 9 0 chrUextra 18991423 18991742 -10012914 - ROVER-I_DM LTR Gypsy -273 6311 5990 1 729 1956 150 6 3 chrUextra 18991777 18992111 -10012545 - ROVER-I_DM LTR Gypsy -1276 5308 4974 1 729 6136 7 0 0 chrUextra 18992211 18992899 -10011757 + G2_DM LINE Jockey 1864 2551 -551 1 729 5464 9 0 39 chrUextra 18993016 18993687 -10010969 + STALKER4_I LTR Gypsy 2725 3369 -3161 1 729 3523 155 13 15 chrUextra 18993787 18994474 -10010182 - SAR_DM Satellite Satellite -435 1037 352 1 729 2738 0 3 7 chrUextra 18994575 18994880 -10009776 - SSU-rRNA_Dme rRNA rRNA -735 1260 957 1 729 5152 7 3 0 chrUextra 18995363 18995934 -10008722 - R1_DM LINE R1 -4783 573 1 1 729 1038 8 8 0 chrUextra 18995934 18996051 -10008605 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2515 1 729 2521 109 16 23 chrUextra 18996155 18996839 -10007817 - DMSAT6 Satellite Satellite -98 679 1 1 729 2339 0 0 0 chrUextra 18996939 18997190 -10007466 - FW_DM LINE Jockey -4441 251 1 1 729 1879 185 73 14 chrUextra 18997199 18997622 -10007034 - HETA LINE telomeric -1164 4917 4470 1 729 1605 233 45 55 chrUextra 18997728 18998414 -10006242 + SAR_DM Satellite Satellite 180 858 -614 1 729 6130 16 0 0 chrUextra 18998515 18999203 -10005453 - R1_DM LINE R1 -1596 3760 3073 1 729 6336 0 1 3 chrUextra 18999304 18999991 -10004665 - SSU-rRNA_Dme rRNA rRNA -287 1708 1023 1 729 220 315 0 0 chrUextra 19000542 19000720 -10003936 + A-rich Low_complexity Low_complexity 1 178 0 1 729 347 26 0 0 chrUextra 19000879 19000918 -10003738 - NTS_DM Other Other -201 39 1 1 729 1882 21 17 17 chrUextra 19000918 19001158 -10003498 - NTS_DM Other Other 0 240 1 1 729 1879 21 17 17 chrUextra 19001158 19001398 -10003258 - NTS_DM Other Other 0 240 1 1 729 1203 18 24 24 chrUextra 19001398 19001567 -10003089 - NTS_DM Other Other 0 240 72 1 729 5444 43 3 13 chrUextra 19001667 19002355 -10002301 - BATUMI_I LTR Pao -4322 3641 2961 1 729 6191 7 0 0 chrUextra 19002455 19003143 -10001513 + STALKER4_I LTR Gypsy 1986 2673 -3857 1 729 5591 36 3 19 chrUextra 19003243 19003931 -10000725 + BATUMI_I LTR Pao 1259 1935 -6028 1 729 3387 44 102 30 chrUextra 19004031 19004500 -10000156 + Invader2_I LTR Gypsy 717 1219 -3373 1 729 1919 30 0 9 chrUextra 19004487 19004719 -9999937 + Invader2_I LTR Gypsy 1873 2102 -2490 1 91 5798 6 1 1 chrUextra 19004819 19005465 -9999191 - ACCORD_I LTR Gypsy -5642 646 1 1 730 259 0 381 0 chrUextra 19005465 19005507 -9999149 - ACCORD_LTR LTR Gypsy 0 558 501 1 730 554 88 0 0 chrUextra 19005607 19005687 -9998969 - ACCORD2_I LTR Gypsy -3469 3743 3664 1 730 4788 50 0 11 chrUextra 19005687 19006295 -9998361 - ACCORD2_I LTR Gypsy -3949 3263 2663 1 730 5333 87 0 0 chrUextra 19006395 19007083 -9997573 + Gypsy12_I LTR Gypsy 3106 3793 -1753 1 730 405 318 76 17 chrUextra 19007216 19007453 -9997203 + Gypsy7_I LTR Gypsy 1238 1488 -3496 1 730 389 269 0 0 chrUextra 19007496 19007604 -9997052 + Gypsy7_I LTR Gypsy 1560 1667 -3317 1 730 1926 34 4 29 chrUextra 19007631 19007871 -9996785 - G5A_DM LINE Jockey -3 2838 2605 1 730 713 292 51 65 chrUextra 19007991 19008419 -9996237 + Gypsy12_I LTR Gypsy 3835 4256 -1290 1 730 4960 30 3 21 chrUextra 19008052 19008659 -9995997 + CIRCE LINE Composite 1884 2479 -3877 1 730 770 208 0 11 chrUextra 19008767 19008947 -9995709 + (CATATA)n Simple_repeat Simple_repeat 1 178 0 1 730 5314 38 74 32 chrUextra 19009547 19010235 -9994421 + Gypsy3_I LTR Gypsy 4313 5029 -1148 1 730 5960 17 1 1 chrUextra 19010335 19011023 -9993633 - R1_DM LINE R1 -1199 4157 3470 1 730 5355 3 0 0 chrUextra 19011123 19011712 -9992944 - DMRT1B LINE R1 -344 4839 4251 1 730 728 78 10 0 chrUextra 19011708 19011811 -9992845 + R1_DM LINE R1 176 279 -5077 1 730 640 67 11 22 chrUextra 19012303 19012395 -9992261 + BS3_DM LINE Jockey 1700 1790 0 1 730 24 32 0 0 chrUextra 19012494 19012525 -9992131 + AT_rich Low_complexity Low_complexity 1 31 0 1 730 1496 0 17 0 chrUextra 19012699 19012873 -9991783 + (TTATA)n Simple_repeat Simple_repeat 4 180 0 1 730 2857 39 0 0 chrUextra 19012873 19013208 -9991448 + DM1731_LTR LTR Copia 2 336 0 1 730 1615 6 6 0 chrUextra 19013208 19013387 -9991269 + DM1731_I LTR Copia 1 180 -3796 1 730 2023 299 43 40 chrUextra 19013489 19014962 -9989694 - SAR_DM Satellite Satellite -352 1476 1 1 730 32 0 0 0 chrUextra 19015167 19015199 -9989457 + AT_rich Low_complexity Low_complexity 1 32 0 1 730 28 48 0 0 chrUextra 19015529 19015571 -9989085 + AT_rich Low_complexity Low_complexity 1 42 0 1 730 3406 21 8 0 chrUextra 19015851 19016234 -9988422 + Gypsy4_I LTR Gypsy 2304 2689 -3599 1 730 2786 28 0 3 chrUextra 19016219 19016539 -9988117 + Gypsy4_I LTR Gypsy 3200 3518 -2770 1 730 1205 0 29 0 chrUextra 19016639 19016776 -9987880 + ROO_I LTR Pao 8116 8256 0 1 730 3984 5 0 0 chrUextra 19016776 19017204 -9987452 + ROO_LTR LTR Pao 1 428 0 1 730 3951 2 0 2 chrUextra 19018215 19018641 -9986015 - SSU-rRNA_Dme rRNA rRNA -1570 425 1 1 730 32 0 0 0 chrUextra 19018773 19018805 -9985851 + AT_rich Low_complexity Low_complexity 1 32 0 1 730 3557 161 9 18 chrUextra 19019004 19019689 -9984967 + SAR_DM Satellite Satellite 369 1047 -425 1 730 3234 99 67 74 chrUextra 19019805 19020478 -9984178 + MAX_I LTR Pao 1025 1692 -6222 1 730 5684 42 7 1 chrUextra 19021367 19022055 -9982601 - R1_DM LINE R1 -3570 1786 1095 1 730 6074 1 1 1 chrUextra 19022155 19022843 -9981813 - R1_DM LINE R1 -4043 1313 626 1 730 5454 11 1 4 chrUextra 19022943 19023631 -9981025 + Copia_I LTR Copia 2313 2939 -1654 1 730 770 0 0 0 chrUextra 19023731 19023815 -9980841 - LSU-rRNA_Dme rRNA rRNA -3816 84 1 1 730 21 95 0 0 chrUextra 19023827 19023890 -9980766 + AT_rich Low_complexity Low_complexity 1 63 0 1 730 34 24 0 0 chrUextra 19024104 19024145 -9980511 + AT_rich Low_complexity Low_complexity 1 41 0 1 730 271 83 0 0 chrUextra 19024519 19024555 -9980101 - HETRP_DM Satellite Satellite -308 1564 1529 1 730 690 197 13 26 chrUextra 19024676 19024832 -9979824 - HETRP_DM Satellite Satellite -190 1682 1529 1 730 729 200 6 19 chrUextra 19024956 19025114 -9979542 - HETRP_DM Satellite Satellite -188 1684 1529 1 730 2973 70 7 17 chrUextra 19025528 19025933 -9978723 - Baggins1 LINE LOA -262 5191 4791 1 730 651 0 0 0 chrUextra 19026883 19026953 -9977703 + DM176_I LTR Gypsy 6351 6420 0 1 730 3110 47 57 74 chrUextra 19026953 19027455 -9977201 + DM176_LTR LTR Gypsy 1 480 -27 1 730 1017 26 0 0 chrUextra 19027455 19027571 -9977085 + DM176_I LTR Gypsy 1 116 -6304 1 730 2994 174 16 7 chrUextra 19027672 19028284 -9976372 - SAR_DM Satellite Satellite -577 895 278 1 730 263 203 0 0 chrUextra 19028300 19028359 -9976297 - SAR_DM Satellite Satellite -396 1076 1018 1 730 5878 32 0 0 chrUextra 19028459 19029147 -9975509 - R1_DM LINE R1 -2405 2951 2264 1 730 3065 36 0 0 chrUextra 19029247 19029611 -9975045 - R1_DM LINE R1 -2462 2894 2531 1 730 2849 15 0 3 chrUextra 19029610 19029935 -9974721 - R1_DM LINE R1 -3036 2320 1997 1 730 3301 180 10 7 chrUextra 19030037 19030721 -9973935 + SAR_DM Satellite Satellite 238 923 -549 1 730 6238 3 0 1 chrUextra 19030824 19031511 -9973145 - R1_DM LINE R1 -799 4557 3872 1 730 2376 106 26 22 chrUextra 19031615 19032298 -9972358 + DMSAT6 Satellite Satellite 1 685 -3 1 730 6251 1 4 3 chrUextra 19032399 19033087 -9971569 + LSU-rRNA_Dme rRNA rRNA 949 1637 -2263 1 730 3499 163 12 9 chrUextra 19033188 19033875 -9970781 + SAR_DM Satellite Satellite 340 1028 -444 1 730 2718 190 85 23 chrUextra 19033979 19034663 -9969993 + SAR_DM Satellite Satellite 496 1221 -251 1 730 6228 1 0 1 chrUextra 19034763 19035450 -9969206 - R1_DM LINE R1 -1751 3605 2920 1 730 1532 23 0 0 chrUextra 19035550 19035727 -9968929 + MDG1_LTR LTR Gypsy 266 442 0 1 730 1830 28 0 0 chrUextra 19035741 19035954 -9968702 + MDG1_LTR LTR Gypsy 230 442 0 1 730 2612 0 0 0 chrUextra 19035954 19036237 -9968419 + MDG1_I LTR Gypsy 1 283 -6313 1 730 1598 0 0 0 chrUextra 19036337 19036507 -9968149 + LSU-rRNA_Dme rRNA rRNA 3731 3900 0 1 730 268 196 0 19 chrUextra 19036608 19036660 -9967996 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 730 268 196 0 19 chrUextra 19036700 19036752 -9967904 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 730 268 196 0 19 chrUextra 19036792 19036844 -9967812 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 730 253 196 0 19 chrUextra 19036875 19036927 -9967729 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 730 22 56 0 0 chrUextra 19036940 19036976 -9967680 + AT_rich Low_complexity Low_complexity 1 36 0 1 730 3899 12 133 0 chrUextra 19037124 19037809 -9966847 - QUASIMODO_I LTR Gypsy -4929 1131 356 1 730 1490 15 25 20 chrUextra 19037911 19038110 -9966546 + NTS_DM Other Other 41 240 0 1 730 1899 17 17 17 chrUextra 19038110 19038350 -9966306 + NTS_DM Other Other 1 240 0 1 730 1887 21 17 17 chrUextra 19038350 19038590 -9966066 + NTS_DM Other Other 1 240 0 1 730 3426 168 13 9 chrUextra 19038701 19039384 -9965272 - SAR_DM Satellite Satellite -416 1056 371 1 730 6170 7 0 0 chrUextra 19039485 19040172 -9964484 - MDG3_I LTR Gypsy -1099 3887 3201 1 730 5822 0 1 36 chrUextra 19040272 19040959 -9963697 + LSU-rRNA_Dme rRNA rRNA 79 741 -3159 1 730 2897 184 18 28 chrUextra 19041061 19041746 -9962910 + SAR_DM Satellite Satellite 1 678 -216 1 730 362 62 200 67 chrUextra 19041994 19042133 -9962523 + STALKER4_I LTR Gypsy 6491 6530 0 1 730 3235 14 14 0 chrUextra 19042133 19042500 -9962156 + Stalker3_LTR LTR Gypsy 1 372 0 1 730 285 30 0 0 chrUextra 19042500 19042533 -9962123 - R1_DM LINE R1 -523 4833 4801 1 730 2479 92 9 72 chrUextra 19042633 19043319 -9961337 + DMSAT6 Satellite Satellite 1 642 -51 1 730 972 46 0 0 chrUextra 19043977 19044107 -9960549 + (CAAGA)n Simple_repeat Simple_repeat 1 130 0 1 730 5930 25 1 3 chrUextra 19044207 19044894 -9959762 - R1_DM LINE R1 -143 5213 4528 1 730 6012 18 0 3 chrUextra 19044994 19045681 -9958975 - R1_DM LINE R1 -787 4569 3885 1 730 3226 177 6 12 chrUextra 19045790 19046452 -9958204 - SAR_DM Satellite Satellite -569 903 246 1 730 261 146 0 35 chrUextra 19046411 19046468 -9958188 + ARS406_DM Unknown Unknown 1 55 -298 1 730 3288 184 9 7 chrUextra 19047355 19048039 -9956617 + SAR_DM Satellite Satellite 256 940 -532 1 730 5230 0 2 0 chrUextra 19048269 19048829 -9955827 - SSU-rRNA_Dme rRNA rRNA 0 1995 1435 1 730 6289 1 0 0 chrUextra 19048929 19049616 -9955040 - DOC LINE Jockey -2801 1924 1238 1 730 3142 177 108 6 chrUextra 19049716 19050403 -9954253 + STALKER4_I LTR Gypsy 1212 1968 -4562 1 730 5483 3 4 70 chrUextra 19050503 19051190 -9953466 + LSU-rRNA_Dme rRNA rRNA 1300 1941 -1959 1 730 5731 30 1 13 chrUextra 19051290 19051977 -9952679 + FW_DM LINE Jockey 1286 1964 -2728 1 730 2610 119 140 3 chrUextra 19052077 19052764 -9951892 - BATUMI_I LTR Pao -3278 4636 3782 1 730 4318 59 4 2 chrUextra 19052864 19053404 -9951252 + R1_DM LINE R1 919 1459 -3897 1 730 1323 45 0 0 chrUextra 19053395 19053550 -9951106 + R1_DM LINE R1 1402 1556 -3800 1 730 3719 117 4 1 chrUextra 19053664 19054338 -9950318 + Gypsy2_I LTR Gypsy 1713 2839 -4173 1 730 5587 44 3 1 chrUextra 19055225 19055912 -9948744 + R1_DM LINE R1 742 1429 -3927 1 730 6191 7 0 3 chrUextra 19056014 19056699 -9947957 + IDEFIX_I LTR Gypsy 1377 2059 -3569 1 730 3153 166 8 8 chrUextra 19056799 19057466 -9947190 - SAR_DM Satellite Satellite -480 992 326 1 730 5067 49 3 12 chrUextra 19057586 19058273 -9946383 - BATUMI_I LTR Pao -4170 3793 3113 1 730 3960 2 2 2 chrUextra 19058376 19058834 -9945822 - SSU-rRNA_Dme rRNA rRNA -1537 458 1 1 730 32 0 0 0 chrUextra 19058966 19058998 -9945658 + AT_rich Low_complexity Low_complexity 1 32 0 1 730 5862 7 0 1 chrUextra 19059162 19059847 -9944809 + Gypsy4_I LTR Gypsy 2996 3679 -2609 1 730 3137 157 10 10 chrUextra 19059959 19060634 -9944022 - SAR_DM Satellite Satellite -396 1076 402 1 730 2797 181 7 20 chrUextra 19060739 19061421 -9943235 - SAR_DM Satellite Satellite -354 1118 446 1 730 5901 1 0 0 chrUextra 19061521 19062208 -9942448 - ROO_I LTR Pao -2631 5625 4939 1 730 4647 59 6 14 chrUextra 19062341 19062995 -9941661 + R1_DM LINE R1 1 649 -4707 1 730 5893 3 3 1 chrUextra 19063095 19063782 -9940874 - SSU-rRNA_Dme rRNA rRNA -611 1384 697 1 730 1496 315 13 25 chrUextra 19063882 19064569 -9940087 - MICROPIA_I LTR Gypsy -689 3787 3109 1 730 3899 39 6 0 chrUextra 19064670 19065160 -9939496 - DIVER_I LTR Pao -5150 493 1 1 730 628 122 0 144 chrUextra 19065181 19065354 -9939302 - DIVER_LTR LTR Pao 0 224 77 1 730 763 139 0 14 chrUextra 19065457 19065603 -9939053 + ARS406_DM Unknown Unknown 13 156 -197 1 730 2207 175 34 15 chrUextra 19065609 19066142 -9938514 - SAR_DM Satellite Satellite -684 788 246 1 730 2760 193 11 31 chrUextra 19066248 19066930 -9937726 + SAR_DM Satellite Satellite 1 668 -208 1 730 441 339 37 33 chrUextra 19067259 19067716 -9936940 + Copia2_I LTR Copia 2452 2910 -1252 1 730 995 50 7 0 chrUextra 19067818 19067957 -9936699 + ARS406_DM Unknown Unknown 50 189 -164 1 730 2875 188 9 6 chrUextra 19067835 19068504 -9936152 - SAR_DM Satellite Satellite -535 937 267 1 730 2889 173 12 13 chrUextra 19068607 19069285 -9935371 + SAR_DM Satellite Satellite 282 958 -514 1 730 5557 20 1 3 chrUextra 19069391 19070078 -9934578 - R1_DM LINE R1 -979 4377 3692 1 730 2023 198 94 37 chrUextra 19070178 19070855 -9933801 - Gypsy12_LTR LTR Gypsy -354 1982 1267 1 730 4472 2 0 0 chrUextra 19071752 19072264 -9932392 - LSU-rRNA_Dme rRNA rRNA -1601 2299 1788 1 730 987 15 15 8 chrUextra 19072308 19072439 -9932217 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1657 1 730 2323 110 4 35 chrUextra 19072540 19073226 -9931430 + DMSAT6 Satellite Satellite 1 664 -74 1 730 2647 187 23 13 chrUextra 19073326 19074013 -9930643 + SAR_DM Satellite Satellite 301 994 -478 1 730 5635 20 10 1 chrUextra 19074116 19074800 -9929856 + BEL_I LTR Pao 3977 4666 -738 1 730 5696 4 3 3 chrUextra 19074900 19075587 -9929069 - ACCORD_I LTR Gypsy -3051 3237 2551 1 730 2940 89 35 7 chrUextra 19075715 19076167 -9928489 + Gypsy12A_LTR LTR Gypsy 1816 2280 0 1 730 896 138 24 53 chrUextra 19076167 19076374 -9928282 + Gypsy12_I LTR Gypsy 1 201 -5345 1 730 2901 165 25 13 chrUextra 19076474 19077156 -9927500 - SAR_DM Satellite Satellite -451 1021 332 1 730 5985 0 0 1 chrUextra 19078048 19078735 -9925921 + SSU-rRNA_Dme rRNA rRNA 473 1158 -837 1 730 2591 179 25 22 chrUextra 19078837 19079504 -9925152 - SAR_DM Satellite Satellite -619 853 185 1 730 562 175 8 0 chrUextra 19079402 19079522 -9925134 + ARS406_DM Unknown Unknown 1 121 -232 1 730 5802 0 1 0 chrUextra 19079622 19080309 -9924347 - ROO_I LTR Pao -4420 3836 3149 1 730 5832 4 3 3 chrUextra 19080409 19081096 -9923560 - SSU-rRNA_Dme rRNA rRNA -660 1335 649 1 730 5467 23 0 0 chrUextra 19081196 19081883 -9922773 + STALKER4_I LTR Gypsy 2770 3456 -3074 1 730 1725 302 13 13 chrUextra 19081983 19082670 -9921986 - FROGGER_I LTR Copia -481 1596 910 1 730 4576 32 9 9 chrUextra 19082827 19083457 -9921199 + STALKER4_I LTR Gypsy 839 1660 -4870 1 730 720 0 0 0 chrUextra 19083560 19083640 -9921016 + (CTTAT)n Simple_repeat Simple_repeat 3 82 0 1 730 299 192 20 29 chrUextra 19084344 19084446 -9920210 + XDMR_DM Unknown Unknown 260 360 0 1 730 2492 172 57 28 chrUextra 19084361 19085031 -9919625 - SAR_DM Satellite Satellite -354 1118 430 1 730 6011 1 0 0 chrUextra 19085131 19085818 -9918838 + SSU-rRNA_Dme rRNA rRNA 446 1132 -863 1 730 5907 0 0 0 chrUextra 19085918 19086605 -9918051 - Copia_I LTR Copia -3431 1162 476 1 730 5882 0 1 4 chrUextra 19086705 19087392 -9917264 + SSU-rRNA_Dme rRNA rRNA 786 1470 -525 1 730 2747 176 13 24 chrUextra 19087499 19088179 -9916477 - SAR_DM Satellite Satellite -354 1118 446 1 730 5801 1 0 1 chrUextra 19088279 19088966 -9915690 + LSU-rRNA_Dme rRNA rRNA 434 1119 -2781 1 730 5884 3 1 3 chrUextra 19089066 19089753 -9914903 - SSU-rRNA_Dme rRNA rRNA -345 1650 965 1 730 5403 0 0 0 chrUextra 19089920 19090540 -9914116 + FW_DM LINE Jockey 3723 4342 -350 1 730 5900 6 9 0 chrUextra 19090640 19091327 -9913329 - LSU-rRNA_Dme rRNA rRNA -13 3887 3195 1 730 655 186 7 14 chrUextra 19091569 19091711 -9912945 + HETRP_DM Satellite Satellite 1529 1669 -203 1 730 210 37 0 0 chrUextra 19091869 19091896 -9912760 + (GA)n Simple_repeat Simple_repeat 2 28 0 1 730 511 193 16 16 chrUextra 19091896 19092017 -9912639 + HETRP_DM Satellite Satellite 1549 1669 -203 1 730 4779 59 0 3 chrUextra 19092218 19092901 -9911755 - BATUMI_I LTR Pao -1146 6768 5845 1 730 1220 26 0 7 chrUextra 19093001 19093153 -9911503 + R1_DM LINE R1 5206 5356 0 1 730 3668 64 4 4 chrUextra 19093186 19093688 -9910968 + R1_DM LINE R1 1 502 -4854 1 730 3023 157 18 15 chrUextra 19093791 19094457 -9910199 - SAR_DM Satellite Satellite -435 1037 370 1 730 199 190 35 0 chrUextra 19094575 19094633 -9910023 + GA-rich Low_complexity Low_complexity 5 64 0 1 730 563 19 120 0 chrUextra 19094628 19094786 -9909870 + (GA)n Simple_repeat Simple_repeat 2 178 0 1 730 292 185 122 12 chrUextra 19095388 19095470 -9909186 - BS LINE Jockey -1894 3232 3142 1 730 1196 244 6 9 chrUextra 19095726 19096045 -9908611 - BS LINE Jockey -2328 2798 2481 1 730 34 24 0 0 chrUextra 19096312 19096353 -9908303 + AT_rich Low_complexity Low_complexity 1 41 0 1 730 4630 64 42 39 chrUextra 19096936 19097623 -9907033 - CIRCE LINE Composite -5462 894 206 1 730 5729 1 4 4 chrUextra 19097729 19098410 -9906246 - LSU-rRNA_Dme rRNA rRNA -2115 1785 1105 1 730 5942 1 0 0 chrUextra 19099297 19099984 -9904672 - R1_DM LINE R1 -3220 2136 1450 1 730 5932 1 0 0 chrUextra 19100085 19100771 -9903885 + R1_DM LINE R1 1305 1990 -3366 1 730 5827 3 1 4 chrUextra 19100871 19101558 -9903098 + LSU-rRNA_Dme rRNA rRNA 736 1420 -2480 1 730 5608 28 3 0 chrUextra 19101658 19102344 -9902312 - R1_DM LINE R1 -384 4972 4285 1 730 914 102 0 0 chrUextra 19102445 19102592 -9902064 - ARS406_DM Unknown Unknown -206 147 1 1 730 1996 166 7 9 chrUextra 19102592 19103132 -9901524 + SAR_DM Satellite Satellite 1 685 -796 1 730 226 0 0 0 chrUextra 19103232 19103259 -9901397 + NTS_DM Other Other 175 201 -39 1 730 840 9 0 35 chrUextra 19103311 19103424 -9901232 + NTS_DM Other Other 25 133 -107 1 730 1252 18 0 6 chrUextra 19103424 19103589 -9901067 + NTS_DM Other Other 38 201 -39 1 730 21 57 0 0 chrUextra 19103589 19103624 -9901032 + AT_rich Low_complexity Low_complexity 1 35 0 1 730 832 9 9 27 chrUextra 19103650 19103761 -9900895 + NTS_DM Other Other 25 133 -107 1 730 787 0 0 10 chrUextra 19103761 19103858 -9900798 + NTS_DM Other Other 38 133 -107 1 730 486 33 0 0 chrUextra 19103858 19103919 -9900737 + NTS_DM Other Other 38 98 -142 1 730 5918 0 0 0 chrUextra 19104019 19104706 -9899950 - Invader3_I LTR Gypsy -2773 2115 1429 1 730 5677 10 1 0 chrUextra 19104806 19105493 -9899163 - MDG1_I LTR Gypsy -2868 3728 3041 1 730 5919 3 3 1 chrUextra 19105593 19106280 -9898376 + SSU-rRNA_Dme rRNA rRNA 1163 1850 -145 1 730 4731 5 0 0 chrUextra 19106380 19106943 -9897713 + DOC LINE Jockey 4163 4725 0 1 730 22 0 0 0 chrUextra 19107014 19107036 -9897620 + AT_rich Low_complexity Low_complexity 1 22 0 1 730 756 26 0 9 chrUextra 19107167 19107281 -9897375 + NTS_DM Other Other 89 201 -39 1 730 21 57 0 0 chrUextra 19107281 19107316 -9897340 + AT_rich Low_complexity Low_complexity 1 35 0 1 730 832 9 9 27 chrUextra 19107342 19107453 -9897203 + NTS_DM Other Other 25 133 -107 1 730 1408 20 20 20 chrUextra 19107453 19107656 -9897000 + NTS_DM Other Other 38 240 0 1 730 1513 20 5 5 chrUextra 19107656 19107854 -9896802 + NTS_DM Other Other 1 198 -42 1 730 707 33 0 0 chrUextra 19107954 19108045 -9896611 - NTS_DM Other Other -112 128 38 1 730 817 0 0 0 chrUextra 19108045 19108141 -9896515 - NTS_DM Other Other -107 133 38 1 730 832 9 9 27 chrUextra 19108141 19108252 -9896404 - NTS_DM Other Other -107 133 25 1 730 21 57 0 0 chrUextra 19108278 19108313 -9896343 + AT_rich Low_complexity Low_complexity 1 35 0 1 730 1252 18 0 6 chrUextra 19108313 19108478 -9896178 - NTS_DM Other Other -39 201 38 1 730 1128 8 0 0 chrUextra 19108478 19108611 -9896045 - NTS_DM Other Other -107 133 1 1 730 201 221 0 0 chrUextra 19108742 19108810 -9895846 + (TTATG)n Simple_repeat Simple_repeat 2 69 0 1 730 5255 0 0 2 chrUextra 19108816 19109428 -9895228 + FW_DM LINE Jockey 1 611 -4081 1 730 2949 170 10 10 chrUextra 19109528 19110199 -9894457 + SAR_DM Satellite Satellite 267 937 -535 1 730 993 58 0 0 chrUextra 19110076 19110215 -9894441 - ARS406_DM Unknown Unknown -164 189 51 1 730 262 106 0 21 chrUextra 19110665 19110713 -9893943 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 730 351 49 65 16 chrUextra 19110735 19110797 -9893859 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 730 697 193 0 7 chrUextra 19110796 19110942 -9893714 - DMLTR5 LTR Gypsy 0 266 122 1 730 2466 35 6 0 chrUextra 19111126 19111441 -9893215 + PROTOP DNA P 4164 4480 0 1 730 1620 7 0 0 chrUextra 19111893 19112175 -9892481 + (TATAA)n Simple_repeat Simple_repeat 1 282 0 1 730 2755 6 0 0 chrUextra 19112175 19112495 -9892161 - MAX_LTR LTR Pao -1 320 1 1 730 680 0 0 0 chrUextra 19112495 19112576 -9892080 - MAX_I LTR Pao 0 7914 7834 1 730 2908 25 3 0 chrUextra 19112676 19113030 -9891626 - DIVER2_LTR LTR Pao -30 355 1 1 730 2715 24 3 0 chrUextra 19113030 19113363 -9891293 - DIVER2_I LTR Pao 0 4147 3814 1 730 5887 0 1 4 chrUextra 19113463 19114150 -9890506 + SSU-rRNA_Dme rRNA rRNA 807 1491 -504 1 730 5852 0 1 1 chrUextra 19114250 19114937 -9889719 - R1_DM LINE R1 -2010 3346 2660 1 730 2565 191 29 27 chrUextra 19115037 19115724 -9888932 - SAR_DM Satellite Satellite -639 688 1 1 730 2637 189 6 21 chrUextra 19115824 19116483 -9888173 + SAR_DM Satellite Satellite 470 1118 -354 1 730 396 180 18 26 chrUextra 19116397 19116511 -9888145 - XDMR_DM Unknown Unknown 0 360 248 1 730 5930 1 1 1 chrUextra 19116611 19117298 -9887358 + SSU-rRNA_Dme rRNA rRNA 606 1292 -703 1 730 4193 79 144 19 chrUextra 19117399 19118085 -9886571 + Gypsy12_I LTR Gypsy 4765 5536 -10 1 730 3078 172 16 9 chrUextra 19118185 19118872 -9885784 + SAR_DM Satellite Satellite 377 1068 -404 1 730 650 99 292 5 chrUextra 19118972 19119157 -9885499 + PROTOP DNA P 469 707 -3773 1 730 402 108 0 0 chrUextra 19119158 19119223 -9885433 + PROTOP DNA P 1009 1073 -3407 1 730 2561 96 116 7 chrUextra 19119219 19119658 -9884998 + PROTOP DNA P 3960 4446 -34 1 730 5557 29 0 0 chrUextra 19119759 19120446 -9884210 - R1_DM LINE R1 -2471 2885 2199 1 730 2729 181 12 26 chrUextra 19120546 19121232 -9883424 + SAR_DM Satellite Satellite 438 1113 -359 1 730 34 24 0 0 chrUextra 19122362 19122403 -9882253 + AT_rich Low_complexity Low_complexity 1 41 0 1 730 2770 171 45 22 chrUextra 19122908 19123594 -9881062 - SAR_DM Satellite Satellite -563 909 208 1 730 23 54 0 0 chrUextra 19123828 19123865 -9880791 + AT_rich Low_complexity Low_complexity 1 37 0 1 730 21 36 0 0 chrUextra 19124254 19124282 -9880374 + AT_rich Low_complexity Low_complexity 1 28 0 1 730 5761 0 0 1 chrUextra 19124481 19125168 -9879488 - ROO_I LTR Pao -4660 3596 2911 1 730 2673 168 12 26 chrUextra 19125268 19125927 -9878729 + SAR_DM Satellite Satellite 469 1118 -354 1 730 428 188 9 18 chrUextra 19125841 19125955 -9878701 - XDMR_DM Unknown Unknown 0 360 248 1 730 5673 3 0 1 chrUextra 19126055 19126742 -9877914 + DM176_I LTR Gypsy 5265 5950 -470 1 730 5129 53 3 7 chrUextra 19126842 19127529 -9877127 + BATUMI_I LTR Pao 3305 3988 -3975 1 730 2810 59 5 0 chrUextra 19127629 19128003 -9876653 - Baggins1 LINE LOA -287 5166 4791 1 730 1122 46 0 25 chrUextra 19128159 19128316 -9876340 - R1_DM LINE R1 -3113 2243 2091 1 730 1547 34 6 3 chrUextra 19128417 19128774 -9875882 + (CTTAT)n Simple_repeat Simple_repeat 1 357 0 1 730 6012 1 0 0 chrUextra 19129205 19129890 -9874766 + SSU-rRNA_Dme rRNA rRNA 301 985 -1010 1 730 3466 0 0 2 chrUextra 19129990 19130388 -9874268 - ROO_LTR LTR Pao -31 397 1 1 730 2272 7 3 0 chrUextra 19130388 19130677 -9873979 - ROO_I LTR Pao 0 8256 7967 1 730 2568 19 19 0 chrUextra 19130777 19131101 -9873555 + FW_DM LINE Jockey 4363 4692 0 1 730 2732 58 3 3 chrUextra 19131102 19131464 -9873192 - R1_DM LINE R1 -3963 1393 1032 1 730 5889 1 0 1 chrUextra 19131564 19132251 -9872405 + LSU-rRNA_Dme rRNA rRNA 586 1271 -2629 1 730 5759 13 0 3 chrUextra 19132351 19133038 -9871618 + R1_DM LINE R1 1912 2596 -2760 1 730 301 0 23 0 chrUextra 19133138 19133182 -9871474 + NTS_DM Other Other 89 133 -107 1 730 1234 24 0 6 chrUextra 19133182 19133347 -9871309 + NTS_DM Other Other 38 201 -39 1 730 21 57 0 0 chrUextra 19133347 19133382 -9871274 + AT_rich Low_complexity Low_complexity 1 35 0 1 730 832 9 9 27 chrUextra 19133408 19133519 -9871137 + NTS_DM Other Other 25 133 -107 1 730 817 0 0 0 chrUextra 19133519 19133615 -9871041 + NTS_DM Other Other 38 133 -107 1 730 1387 25 20 20 chrUextra 19133615 19133818 -9870838 + NTS_DM Other Other 38 240 0 1 730 489 70 0 0 chrUextra 19133926 19133997 -9870659 - ARS406_DM Unknown Unknown -282 71 1 1 730 2814 183 18 13 chrUextra 19133935 19134612 -9870044 + SAR_DM Satellite Satellite 224 903 -569 1 730 2542 73 25 13 chrUextra 19134712 19135399 -9869257 - DMSAT6 Satellite Satellite -107 695 1 1 730 2763 183 14 6 chrUextra 19135499 19136158 -9868498 - SAR_DM Satellite Satellite -436 1036 373 1 91 2571 202 28 6 chrUextra 19136297 19136973 -9867683 + SAR_DM Satellite Satellite 224 914 -558 1 731 2649 189 8 21 chrUextra 19137073 19137743 -9866913 + SAR_DM Satellite Satellite 459 1119 -353 1 731 386 200 11 0 chrUextra 19137665 19137760 -9866896 - XDMR_DM Unknown Unknown -7 353 258 1 731 600 287 13 13 chrUextra 19137888 19138192 -9866464 - Copia_I LTR Copia -2314 2279 1976 1 731 2694 45 20 3 chrUextra 19138192 19138547 -9866109 + BS2 LINE Jockey 2722 3082 -1639 1 731 5637 0 3 1 chrUextra 19138684 19139334 -9865322 - LSU-rRNA_Dme rRNA rRNA 0 3900 3250 1 731 2633 19 0 3 chrUextra 19139434 19139751 -9864905 + CIRCE LINE Composite 1567 1882 -4474 1 731 529 289 53 53 chrUextra 19139760 19139827 -9864829 + Gypsy12_I LTR Gypsy 3835 4195 -1351 1 731 2348 21 0 20 chrUextra 19139827 19140121 -9864535 + CIRCE LINE Composite 1888 2175 -4181 1 731 636 305 39 23 chrUextra 19140239 19140725 -9863931 - BLOOD_I LTR Gypsy -4348 2265 1772 1 731 2911 44 0 0 chrUextra 19141008 19141372 -9863284 + MAX_I LTR Pao 4523 4886 -3028 1 731 2584 31 0 0 chrUextra 19141373 19141695 -9862961 + MAX_I LTR Pao 5025 5346 -2568 1 731 5545 22 4 0 chrUextra 19141795 19142481 -9862175 + STALKER4_I LTR Gypsy 1768 2456 -4074 1 731 5659 7 1 0 chrUextra 19142582 19143269 -9861387 + STALKER4_I LTR Gypsy 5582 6269 -261 1 731 1187 7 0 0 chrUextra 19143369 19143507 -9861149 - LSU-rRNA_Dme rRNA rRNA -1123 2777 2640 1 731 4677 4 2 2 chrUextra 19143509 19144056 -9860600 - R1_DM LINE R1 0 5356 4810 1 731 1617 191 24 8 chrUextra 19144161 19144843 -9859813 - SAR_DM Satellite Satellite -535 692 1 1 731 5467 22 23 1 chrUextra 19144943 19145630 -9859026 + STALKER4_I LTR Gypsy 4296 4997 -1533 1 731 6001 0 0 0 chrUextra 19145730 19146417 -9858239 - ROO_I LTR Pao -545 7711 7025 1 731 2911 179 6 8 chrUextra 19146520 19147179 -9857477 - SAR_DM Satellite Satellite -620 852 195 1 731 727 102 0 0 chrUextra 19147086 19147204 -9857452 + ARS406_DM Unknown Unknown 1 118 -235 1 731 3000 181 9 9 chrUextra 19147304 19147991 -9856665 + SAR_DM Satellite Satellite 370 1056 -416 1 731 3092 159 13 15 chrUextra 19148095 19148778 -9855878 - SAR_DM Satellite Satellite -496 976 295 1 731 4150 65 27 3 chrUextra 19148880 19149464 -9855192 + R1_DM LINE R1 136 733 -4623 1 731 785 67 0 0 chrUextra 19149460 19149565 -9855091 + R1_DM LINE R1 1224 1328 -4028 1 731 1176 0 0 0 chrUextra 19149677 19149812 -9854844 - 5S_DM RNA RNA 0 135 1 1 731 1176 0 0 0 chrUextra 19150043 19150178 -9854478 - 5S_DM RNA RNA 0 135 1 1 731 5286 22 96 0 chrUextra 19150452 19151139 -9853517 + FW_DM LINE Jockey 3130 3882 -810 1 731 2126 28 0 0 chrUextra 19151240 19151495 -9853161 - Gypsy4_LTR LTR Gypsy -32 255 1 1 731 3734 7 0 0 chrUextra 19151495 19151926 -9852730 - Gypsy4_I LTR Gypsy 0 6288 5858 1 731 2673 181 18 25 chrUextra 19152026 19152707 -9851949 - SAR_DM Satellite Satellite -315 1157 482 1 731 5009 28 15 0 chrUextra 19152882 19153500 -9851156 + CIRCE LINE Composite 5428 6054 -302 1 731 2488 253 0 0 chrUextra 19153646 19154286 -9850370 - G6_DM LINE Jockey -715 1327 688 1 731 34 24 0 0 chrUextra 19154600 19154641 -9850015 + AT_rich Low_complexity Low_complexity 1 41 0 1 731 21 95 0 0 chrUextra 19154854 19154917 -9849739 + AT_rich Low_complexity Low_complexity 1 63 0 1 731 1223 0 0 7 chrUextra 19154929 19155074 -9849582 + LSU-rRNA_Dme rRNA rRNA 1 144 -3756 1 731 1315 53 5 42 chrUextra 19155174 19155386 -9849270 - BATUMI_I LTR Pao -758 7205 7002 1 731 2597 6 95 6 chrUextra 19155386 19155861 -9848795 - BATUMI_I LTR Pao 0 7963 7447 1 731 792 340 19 12 chrUextra 19155961 19156443 -9848213 + Gypsy_I LTR Gypsy 4496 4980 -1527 1 731 5520 25 3 1 chrUextra 19156748 19157435 -9847221 - R1_DM LINE R1 -1468 3888 3201 1 731 3035 167 10 13 chrUextra 19157549 19158221 -9846435 - SAR_DM Satellite Satellite -396 1076 407 1 731 561 68 0 0 chrUextra 19158324 19158398 -9846258 + (GAAAA)n Simple_repeat Simple_repeat 4 77 0 1 731 6023 0 1 0 chrUextra 19159110 19159796 -9844860 - LSU-rRNA_Dme rRNA rRNA -10 3890 3204 1 731 5968 0 0 0 chrUextra 19159896 19160583 -9844073 - R1_DM LINE R1 -2901 2455 1769 1 731 5521 16 6 12 chrUextra 19160683 19161370 -9843286 + FW_DM LINE Jockey 3954 4636 -56 1 731 4158 12 25 12 chrUextra 19161470 19161989 -9842667 - QUASIMODO_I LTR Gypsy -5534 526 1 1 731 1374 6 0 6 chrUextra 19161989 19162157 -9842499 - QUASIMODO_LTR LTR Gypsy 0 658 492 1 731 2470 3 0 0 chrUextra 19162257 19162541 -9842115 - LSU-rRNA_Dme rRNA rRNA -977 2923 2640 1 731 3484 7 0 0 chrUextra 19162539 19162944 -9841712 - R1_DM LINE R1 0 5356 4952 1 731 861 0 31 24 chrUextra 19163045 19163172 -9841484 + NTS_DM Other Other 113 240 0 1 731 1847 4 17 13 chrUextra 19163172 19163411 -9841245 + NTS_DM Other Other 1 240 0 1 731 1301 6 0 18 chrUextra 19163411 19163576 -9841080 + NTS_DM Other Other 1 162 -78 1 731 312 67 0 0 chrUextra 19163686 19163731 -9840925 + NTS_DM Other Other 4 48 -192 1 731 692 105 0 0 chrUextra 19163831 19163945 -9840711 - ARS406_DM Unknown Unknown -239 114 1 1 731 2796 186 6 6 chrUextra 19163852 19164505 -9840151 + SAR_DM Satellite Satellite 195 847 -625 1 731 241 119 24 0 chrUextra 19164473 19164515 -9840141 - ARS406_DM Unknown Unknown -164 189 147 1 731 991 176 49 10 chrUextra 19164618 19165296 -9839360 - SAR_DM Satellite Satellite -865 704 1 1 731 5947 9 0 0 chrUextra 19165405 19166092 -9838564 - Invader1_I LTR Gypsy -2037 1149 463 1 731 1370 26 11 0 chrUextra 19166192 19166382 -9838274 + STALKER4_I LTR Gypsy 6339 6530 0 1 731 799 61 0 0 chrUextra 19166382 19166497 -9838159 + STALKER4_LTR LTR Gypsy 1 115 -287 1 731 2664 3 0 3 chrUextra 19166479 19166800 -9837856 + BARI_DM DNA Tc1 1408 1727 -1 1 731 655 0 13 0 chrUextra 19166800 19166879 -9837777 + BARI_DM DNA Tc1 4 83 -1645 1 731 5709 12 3 1 chrUextra 19166979 19167666 -9836990 + FW_DM LINE Jockey 3900 4587 -105 1 731 5960 1 0 0 chrUextra 19167766 19168453 -9836203 - FW_DM LINE Jockey -818 3874 3188 1 731 1249 14 0 0 chrUextra 19168553 19168698 -9835958 - LSU-rRNA_Dme rRNA rRNA -1178 2722 2578 1 731 4767 0 0 2 chrUextra 19168694 19169240 -9835416 - R2_DM LINE R2 -6 3601 3057 1 731 1422 33 0 0 chrUextra 19169658 19169838 -9834818 + (TATTG)n Simple_repeat Simple_repeat 1 180 0 1 731 613 181 0 11 chrUextra 19169845 19170024 -9834632 + (TCTTG)n Simple_repeat Simple_repeat 2 178 0 1 731 3673 5 0 0 chrUextra 19170129 19170552 -9834104 + R2_DM LINE R2 3185 3607 0 1 731 2195 12 0 0 chrUextra 19170560 19170814 -9833842 + LSU-rRNA_Dme rRNA rRNA 2578 2831 -1069 1 731 3445 17 2 0 chrUextra 19170914 19171331 -9833325 - PROTOP_A DNA P -687 418 1 1 731 1148 122 0 6 chrUextra 19171331 19171512 -9833144 - TART LINE telomeric -7545 6932 6753 1 731 2857 174 38 15 chrUextra 19172492 19173173 -9831483 - SAR_DM Satellite Satellite -581 891 195 1 731 34 24 0 0 chrUextra 19173690 19173731 -9830925 + AT_rich Low_complexity Low_complexity 1 41 0 1 731 3014 176 9 7 chrUextra 19174064 19174747 -9829909 + SAR_DM Satellite Satellite 195 878 -594 1 731 2408 168 19 13 chrUextra 19174848 19175530 -9829126 - SAR_DM Satellite Satellite -684 685 1 1 731 2931 180 9 10 chrUextra 19175638 19176316 -9828340 - SAR_DM Satellite Satellite -514 958 282 1 731 5280 33 3 3 chrUextra 19176443 19177105 -9827551 - R1_DM LINE R1 0 5356 4695 1 731 5940 4 0 0 chrUextra 19177205 19177891 -9826765 - R1_DM LINE R1 -457 4899 4214 1 731 2373 191 38 9 chrUextra 19177991 19178677 -9825979 - SAR_DM Satellite Satellite -219 1253 295 1 731 2925 179 7 16 chrUextra 19178777 19179463 -9825193 + SAR_DM Satellite Satellite 333 1012 -460 1 731 2897 183 12 9 chrUextra 19179563 19180248 -9824408 + SAR_DM Satellite Satellite 209 895 -577 1 731 5906 0 0 0 chrUextra 19180349 19181035 -9823621 - Gypsy4_I LTR Gypsy -924 5364 4679 1 731 4825 66 50 0 chrUextra 19181135 19181821 -9822835 + TART LINE telomeric 1287 2006 -12471 1 731 301 25 25 0 chrUextra 19181921 19181961 -9822695 + ARS406_DM Unknown Unknown 149 189 -164 1 731 2659 189 9 12 chrUextra 19181929 19182587 -9822069 - SAR_DM Satellite Satellite -625 847 192 1 731 638 88 0 34 chrUextra 19182489 19182607 -9822049 + ARS406_DM Unknown Unknown 1 114 -239 1 731 2746 188 18 21 chrUextra 19182708 19183393 -9821263 + SAR_DM Satellite Satellite 1 683 -208 1 731 246 150 0 0 chrUextra 19183536 19183576 -9821080 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 731 246 150 0 0 chrUextra 19183628 19183668 -9820988 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 731 246 150 0 0 chrUextra 19183720 19183760 -9820896 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 731 246 150 0 0 chrUextra 19183812 19183852 -9820804 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 731 22 56 0 0 chrUextra 19183857 19183893 -9820763 + AT_rich Low_complexity Low_complexity 1 36 0 1 731 1816 5 0 5 chrUextra 19183965 19184179 -9820477 - LSU-rRNA_Dme rRNA rRNA 0 3900 3688 1 731 3066 178 6 7 chrUextra 19184285 19184965 -9819691 + SAR_DM Satellite Satellite 195 873 -599 1 731 5774 3 0 3 chrUextra 19185065 19185751 -9818905 + DOC LINE Jockey 1168 1851 -2874 1 731 1935 195 59 11 chrUextra 19185854 19186536 -9818120 - SAR_DM Satellite Satellite -487 715 1 1 731 222 91 0 0 chrUextra 19186922 19186955 -9817701 + (GA)n Simple_repeat Simple_repeat 1 33 0 1 731 3099 26 3 3 chrUextra 19187423 19187810 -9816846 + R1_DM LINE R1 3528 3914 -1442 1 731 2163 54 53 7 chrUextra 19187809 19188109 -9816547 + R1_DM LINE R1 268 581 -4775 1 731 34 24 0 0 chrUextra 19188742 19188783 -9815873 + AT_rich Low_complexity Low_complexity 1 41 0 1 731 5462 39 3 0 chrUextra 19188995 19189681 -9814975 + DMCR1A LINE CR1 964 1651 -2819 1 731 5730 25 0 0 chrUextra 19189781 19190467 -9814189 + DIVER_I LTR Pao 800 1485 -4158 1 731 1195 13 0 19 chrUextra 19190567 19190722 -9813934 + NTS_DM Other Other 11 162 -78 1 731 488 119 36 0 chrUextra 19190832 19190916 -9813740 + NTS_DM Other Other 4 90 -150 1 731 28 48 0 0 chrUextra 19191189 19191231 -9813425 + AT_rich Low_complexity Low_complexity 1 42 0 1 731 5869 3 1 1 chrUextra 19191353 19192039 -9812617 + DMRT1A LINE R1 3810 4495 -688 1 731 5860 0 3 4 chrUextra 19192139 19192825 -9811831 - SSU-rRNA_Dme rRNA rRNA -200 1795 1111 1 731 2584 194 21 30 chrUextra 19192927 19193611 -9811045 + SAR_DM Satellite Satellite 1 678 -361 1 731 5811 12 4 0 chrUextra 19194498 19195183 -9809473 + Copia2_I LTR Copia 2559 3246 -916 1 731 3201 15 3 0 chrUextra 19195286 19195675 -9808981 + Copia2_I LTR Copia 1093 1482 -2680 1 731 247 0 127 0 chrUextra 19195905 19195968 -9808688 + (TA)n Simple_repeat Simple_repeat 1 71 0 1 731 5946 0 0 3 chrUextra 19196069 19196755 -9807901 + SSU-rRNA_Dme rRNA rRNA 493 1176 -819 1 731 1830 145 38 26 chrUextra 19196855 19197246 -9807410 - STALKER4_I LTR Gypsy -5787 743 235 1 731 2227 15 0 0 chrUextra 19197277 19197541 -9807115 - STALKER4_LTR LTR Gypsy -53 349 86 1 731 282 320 38 38 chrUextra 19197644 19198039 -9806617 - BLASTOPIA_I LTR Gypsy -2302 2586 2180 1 731 4635 48 3 54 chrUextra 19198427 19199113 -9805543 - BATUMI_I LTR Pao -5137 2826 2176 1 731 5446 25 32 1 chrUextra 19199213 19199899 -9804757 - R1_DM LINE R1 -1731 3625 2919 1 731 32 0 0 0 chrUextra 19200310 19200342 -9804314 + AT_rich Low_complexity Low_complexity 1 32 0 1 731 1822 5 0 0 chrUextra 19200474 19200685 -9803971 + SSU-rRNA_Dme rRNA rRNA 1 211 -1784 1 731 5516 0 0 0 chrUextra 19200822 19201471 -9803185 + LSU-rRNA_Dme rRNA rRNA 218 866 -3034 1 731 5518 28 1 9 chrUextra 19201571 19202257 -9802399 - BATUMI_I LTR Pao -1643 6320 5640 1 731 2229 117 13 38 chrUextra 19202357 19203041 -9801615 + DMSAT6 Satellite Satellite 1 666 -74 1 731 1419 29 0 0 chrUextra 19203143 19203318 -9801338 + CIRCE LINE Composite 1708 1882 -4474 1 731 579 296 42 57 chrUextra 19203327 19203729 -9800927 + Gypsy12_I LTR Gypsy 3835 4230 -1316 1 731 3342 24 9 21 chrUextra 19203394 19203826 -9800830 + CIRCE LINE Composite 1888 2314 -4042 1 731 5609 18 0 9 chrUextra 19203929 19204615 -9800041 + Gypsy2_I LTR Gypsy 1928 2607 -3528 1 731 2725 171 32 22 chrUextra 19204720 19205401 -9799255 - SAR_DM Satellite Satellite -532 940 253 1 731 4843 31 136 1 chrUextra 19205502 19206187 -9798469 + IDEFIX_I LTR Gypsy 118 894 -4734 1 731 5099 26 57 0 chrUextra 19206287 19206973 -9797683 + Invader2_I LTR Gypsy 2483 3207 -1385 1 731 740 98 8 0 chrUextra 19207073 19207195 -9797461 - ARS406_DM Unknown Unknown -230 123 1 1 731 2829 178 12 9 chrUextra 19207099 19207758 -9796898 + SAR_DM Satellite Satellite 192 852 -620 1 731 2593 198 24 23 chrUextra 19207862 19208544 -9796112 + SAR_DM Satellite Satellite 1 682 -216 1 731 3368 5 7 7 chrUextra 19208739 19209153 -9795503 + DM297_LTR LTR Gypsy 1 414 0 1 731 1395 23 0 6 chrUextra 19209153 19209331 -9795325 + DM297_I LTR Gypsy 1 177 -5990 1 731 21 89 0 0 chrUextra 19210801 19210857 -9793799 + AT_rich Low_complexity Low_complexity 1 56 0 1 731 230 0 0 0 chrUextra 19210876 19210903 -9793753 - SSU-rRNA_Dme rRNA rRNA 0 1995 1969 1 731 2203 201 106 15 chrUextra 19211003 19211689 -9792967 - TART LINE telomeric -3927 10550 9802 1 731 5823 1 0 0 chrUextra 19211789 19212475 -9792181 + LSU-rRNA_Dme rRNA rRNA 400 1085 -2815 1 731 920 63 7 20 chrUextra 19212575 19213261 -9791395 + RSP Satellite Satellite 1 677 0 1 731 5463 31 3 0 chrUextra 19213361 19214047 -9790609 + MDG1_I LTR Gypsy 3408 4095 -2501 1 731 5989 3 1 0 chrUextra 19214147 19214833 -9789823 + BEL_I LTR Pao 4346 5032 -372 1 731 5176 2 0 3 chrUextra 19215022 19215619 -9789037 + SSU-rRNA_Dme rRNA rRNA 1 595 -1400 1 731 2883 194 9 20 chrUextra 19215719 19216405 -9788251 + SAR_DM Satellite Satellite 1 678 -227 1 731 240 353 0 0 chrUextra 19216634 19216736 -9787920 + G2_DM LINE Jockey 281 382 -2720 1 731 1537 172 10 3 chrUextra 19216888 19217191 -9787465 + Gypsy2_I LTR Gypsy 5087 5391 -744 1 731 2464 80 13 26 chrUextra 19218077 19218763 -9785893 - DMSAT6 Satellite Satellite -66 676 1 1 731 2756 196 20 5 chrUextra 19218864 19219526 -9785130 - SAR_DM Satellite Satellite -555 917 246 1 731 346 143 0 0 chrUextra 19219486 19219549 -9785107 + ARS406_DM Unknown Unknown 1 63 -290 1 731 386 137 57 41 chrUextra 19219649 19219771 -9784885 + NTS_DM Other Other 117 240 0 1 731 1029 134 20 5 chrUextra 19219910 19220112 -9784544 + NTS_DM Other Other 1 205 -35 1 731 259 146 21 0 chrUextra 19220143 19220191 -9784465 + NTS_DM Other Other 1 49 -191 1 731 1460 33 0 0 chrUextra 19220435 19220618 -9784038 - FW_DM LINE Jockey -4509 183 1 1 731 3640 35 0 0 chrUextra 19220626 19221078 -9783578 + R1_DM LINE R1 1377 1828 -3528 1 731 356 67 0 0 chrUextra 19221076 19221121 -9783535 + R1_DM LINE R1 1317 1361 -3995 1 731 3235 11 0 0 chrUextra 19221221 19221599 -9783057 - DMRT1B LINE R1 -1270 3913 3536 1 731 1620 0 0 0 chrUextra 19221599 19221904 -9782752 + (CACAA)n Simple_repeat Simple_repeat 1 305 0 1 731 5565 16 0 4 chrUextra 19222008 19222693 -9781963 - MICROPIA_I LTR Gypsy -31 4445 3764 1 731 259 182 0 0 chrUextra 19222793 19222848 -9781808 - ARS406_DM Unknown Unknown -298 55 1 1 731 2970 178 11 8 chrUextra 19222810 19223479 -9781177 + SAR_DM Satellite Satellite 248 918 -554 1 731 5578 19 6 1 chrUextra 19223579 19224265 -9780391 + R1_DM LINE R1 3746 4434 -922 1 731 5438 28 1 1 chrUextra 19224365 19225051 -9779605 + DMRT1B LINE R1 328 1013 -4170 1 731 2388 92 13 15 chrUextra 19225152 19225837 -9778819 - DMSAT6 Satellite Satellite -17 684 1 1 731 2718 0 0 3 chrUextra 19225937 19226277 -9778379 + DM412 LTR Gypsy 6559 6897 0 1 731 3864 9 0 2 chrUextra 19226167 19226623 -9778033 + T412LTR LTR LTR 1 455 -26 1 731 5711 0 0 1 chrUextra 19226723 19227409 -9777247 + ROO_I LTR Pao 4638 5322 -2934 1 731 3280 147 16 36 chrUextra 19227509 19228195 -9776461 + TART LINE telomeric 9642 10313 -4164 1 731 1817 4 17 17 chrUextra 19228319 19228559 -9776097 - NTS_DM Other Other 0 240 1 1 731 1797 13 17 13 chrUextra 19228559 19228798 -9775858 - NTS_DM Other Other 0 240 1 1 731 1312 6 22 16 chrUextra 19228798 19228981 -9775675 - NTS_DM Other Other 0 240 57 1 731 1607 186 3 3 chrUextra 19229869 19230552 -9774104 + SAR_DM Satellite Satellite 1 683 -558 1 731 5483 22 50 1 chrUextra 19230653 19231337 -9773319 - BATUMI_I LTR Pao -2748 5215 4499 1 731 1365 141 106 16 chrUextra 19231449 19231817 -9772839 - DNAREP1_DM LINE Penelope -259 335 1 1 731 461 273 40 7 chrUextra 19231814 19232000 -9772656 - Gypsy_I LTR Gypsy -4497 2010 1797 1 731 610 43 0 0 chrUextra 19232228 19232321 -9772335 + FW_DM LINE Jockey 4600 4692 0 1 731 4009 52 119 2 chrUextra 19232317 19232911 -9771745 + Gypsy7_I LTR Gypsy 1489 2152 -2832 1 731 2182 114 21 12 chrUextra 19233029 19233697 -9770959 - DMSAT6 Satellite Satellite -6 674 1 1 731 2887 178 7 19 chrUextra 19233803 19234483 -9770173 - SAR_DM Satellite Satellite -382 1090 419 1 731 1098 23 0 0 chrUextra 19235140 19235269 -9769387 + (TCTTG)n Simple_repeat Simple_repeat 3 131 0 1 731 2960 42 5 0 chrUextra 19235506 19235883 -9768773 - STALKER4_LTR LTR Gypsy -23 379 1 1 731 1172 29 12 6 chrUextra 19235883 19236055 -9768601 - STALKER4_I LTR Gypsy 0 6530 6358 1 731 5341 45 1 1 chrUextra 19236155 19236841 -9767815 + R1_DM LINE R1 884 1569 -3787 1 731 4262 2 93 2 chrUextra 19236941 19237465 -9767191 + LSU-rRNA_Dme rRNA rRNA 2061 2632 -1268 1 731 1352 6 6 0 chrUextra 19237465 19237627 -9767029 + R1_DM LINE R1 1 163 -5193 1 731 5521 29 0 1 chrUextra 19237727 19238413 -9766243 + R1_DM LINE R1 2189 2873 -2483 1 731 5680 7 0 0 chrUextra 19238513 19239199 -9765457 - STALKER4_I LTR Gypsy -3231 3299 2614 1 731 2558 85 30 22 chrUextra 19239309 19239985 -9764671 + DMSAT6 Satellite Satellite 1 681 0 1 731 2716 184 15 23 chrUextra 19240085 19240770 -9763886 - SAR_DM Satellite Satellite -315 1157 479 1 731 4958 0 2 3 chrUextra 19240982 19241557 -9763099 - SSU-rRNA_Dme rRNA rRNA 0 1995 1422 1 731 4289 32 124 12 chrUextra 19242443 19243129 -9761527 - Gypsy12_LTR LTR Gypsy -316 2020 1258 1 731 32 0 0 0 chrUextra 19244106 19244138 -9760518 + AT_rich Low_complexity Low_complexity 1 32 0 1 731 28 48 0 0 chrUextra 19244466 19244508 -9760148 + AT_rich Low_complexity Low_complexity 1 42 0 1 731 21 0 0 0 chrUextra 19244897 19244918 -9759738 + AT_rich Low_complexity Low_complexity 1 21 0 1 731 262 191 43 43 chrUextra 19245219 19245334 -9759322 + A-rich Low_complexity Low_complexity 3 117 0 1 731 1097 0 0 0 chrUextra 19245359 19245487 -9759169 + ROO_LTR LTR Pao 1 128 -300 1 731 5868 0 1 4 chrUextra 19245587 19246273 -9758383 - SSU-rRNA_Dme rRNA rRNA -472 1523 840 1 731 5480 9 4 0 chrUextra 19246373 19247059 -9757597 + STALKER4_I LTR Gypsy 5691 6379 -151 1 731 1176 0 0 0 chrUextra 19247266 19247401 -9757255 - 5S_DM RNA RNA 0 135 1 1 731 1176 0 0 0 chrUextra 19247632 19247767 -9756889 - 5S_DM RNA RNA 0 135 1 1 731 47 0 0 0 chrUextra 19248230 19248277 -9756379 + AT_rich Low_complexity Low_complexity 1 47 0 1 731 5742 1 3 1 chrUextra 19248731 19249417 -9755239 - R1_DM LINE R1 -3890 1466 780 1 731 3023 170 15 7 chrUextra 19249517 19250197 -9754459 + SAR_DM Satellite Satellite 256 940 -532 1 731 2564 25 3 0 chrUextra 19250303 19250620 -9754036 - R1_DM LINE R1 -3483 1873 1556 1 731 1631 66 0 0 chrUextra 19250631 19250844 -9753812 - R1_DM LINE R1 -3897 1459 1247 1 731 1035 42 0 7 chrUextra 19250846 19250989 -9753667 - R1_DM LINE R1 -4745 611 470 1 731 5861 1 0 0 chrUextra 19251089 19251775 -9752881 + DOC LINE Jockey 1195 1880 -2845 1 731 5489 15 42 1 chrUextra 19251875 19252561 -9752095 + R1_DM LINE R1 3666 4379 -977 1 731 2748 0 6 3 chrUextra 19252662 19252989 -9751667 + LSU-rRNA_Dme rRNA rRNA 1461 1788 -2112 1 731 2772 0 0 0 chrUextra 19253033 19253347 -9751309 + LSU-rRNA_Dme rRNA rRNA 1788 2101 -1799 1 731 2449 199 22 22 chrUextra 19253447 19254133 -9750523 - SAR_DM Satellite Satellite -1036 686 1 1 731 5955 0 0 1 chrUextra 19254236 19254919 -9749737 + SSU-rRNA_Dme rRNA rRNA 483 1164 -831 1 731 1224 72 86 5 chrUextra 19255033 19255230 -9749426 + Gypsy12_LTR LTR Gypsy 1108 1320 -1016 1 731 2886 39 36 34 chrUextra 19255258 19255705 -9748951 + Gypsy12_LTR LTR Gypsy 1480 1927 -409 1 731 1637 169 9 6 chrUextra 19255808 19256491 -9748165 + SAR_DM Satellite Satellite 1 684 -539 1 731 5892 7 1 0 chrUextra 19256591 19257277 -9747379 - Gypsy4_I LTR Gypsy -4952 1336 650 1 731 2761 182 9 9 chrUextra 19257377 19258027 -9746629 - SAR_DM Satellite Satellite -628 844 195 1 731 752 116 0 0 chrUextra 19257934 19258063 -9746593 + ARS406_DM Unknown Unknown 1 129 -224 1 731 2907 174 13 13 chrUextra 19258171 19258847 -9745809 + SAR_DM Satellite Satellite 195 870 -602 1 731 3043 0 3 0 chrUextra 19259735 19260084 -9744572 - LSU-rRNA_Dme rRNA rRNA -161 3739 3390 1 731 2881 3 3 0 chrUextra 19260088 19260421 -9744235 - LSU-rRNA_Dme rRNA rRNA -266 3634 3301 1 731 5575 9 1 3 chrUextra 19260521 19261207 -9743449 + Invader2_I LTR Gypsy 2399 3083 -1509 1 731 5867 6 0 0 chrUextra 19262093 19262779 -9741877 - MDG3_I LTR Gypsy -1554 3432 2747 1 731 1199 201 28 55 chrUextra 19263665 19264065 -9740591 + Gypsy_LTR LTR Gypsy 43 431 -51 1 731 583 73 0 0 chrUextra 19264196 19264278 -9740378 + Jockey2 LINE Jockey 1 82 -3346 1 731 308 121 29 43 chrUextra 19264282 19264351 -9740305 + Gypsy5_LTR LTR Gypsy 77 144 -286 1 731 5593 13 9 3 chrUextra 19264451 19265137 -9739519 + LSU-rRNA_Dme rRNA rRNA 1076 1765 -2135 1 731 1635 256 37 43 chrUextra 19265246 19265923 -9738733 + ROVER-I_DM LTR Gypsy 1455 2127 -4457 1 731 5621 13 1 9 chrUextra 19266023 19266709 -9737947 - Gypsy6_I LTR Gypsy -4681 2331 1651 1 731 35 63 0 0 chrUextra 19267339 19267402 -9737254 + AT_rich Low_complexity Low_complexity 1 63 0 1 732 1305 68 5 0 chrUextra 19267820 19268237 -9736419 + (CTTAT)n Simple_repeat Simple_repeat 1 419 0 1 732 285 130 0 0 chrUextra 19268381 19268427 -9736229 - ARS406_DM Unknown Unknown -185 168 123 1 732 2456 174 50 19 chrUextra 19268423 19269066 -9735590 + SAR_DM Satellite Satellite 200 862 -610 1 732 3287 21 2 16 chrUextra 19269167 19269595 -9735061 - DM176_I LTR Gypsy -5998 422 1 1 732 1158 84 111 50 chrUextra 19269595 19269853 -9734803 - DM176_LTR LTR Gypsy -27 480 221 1 732 2852 182 16 7 chrUextra 19270743 19271417 -9733239 - SAR_DM Satellite Satellite -569 903 224 1 732 382 116 14 0 chrUextra 19271356 19271425 -9733231 + ARS406_DM Unknown Unknown 1 70 -283 1 732 3010 179 9 7 chrUextra 19271532 19272208 -9732448 + SAR_DM Satellite Satellite 247 923 -549 1 732 5720 0 0 3 chrUextra 19272311 19272997 -9731659 - ROO_I LTR Pao -3268 4988 4305 1 732 5568 10 0 0 chrUextra 19273101 19273783 -9730873 + DM176_I LTR Gypsy 1356 2037 -4383 1 732 29 60 0 0 chrUextra 19274774 19274824 -9729832 + AT_rich Low_complexity Low_complexity 1 50 0 1 732 479 122 100 0 chrUextra 19274940 19275030 -9729626 + DNAREP1_DM LINE Penelope 496 594 0 1 732 26 50 0 0 chrUextra 19275084 19275124 -9729532 + AT_rich Low_complexity Low_complexity 1 40 0 1 732 21 71 0 0 chrUextra 19275148 19275190 -9729466 + AT_rich Low_complexity Low_complexity 1 42 0 1 732 2766 180 31 19 chrUextra 19276241 19276927 -9727729 + SAR_DM Satellite Satellite 185 878 -594 1 732 5867 3 1 3 chrUextra 19277027 19277713 -9726943 - LSU-rRNA_Dme rRNA rRNA -2320 1580 896 1 732 46 0 0 0 chrUextra 19279147 19279193 -9725463 + AT_rich Low_complexity Low_complexity 1 46 0 1 732 5952 0 3 1 chrUextra 19279385 19280071 -9724585 - LSU-rRNA_Dme rRNA rRNA -67 3833 3147 1 732 705 12 0 0 chrUextra 19280171 19280253 -9724403 - NTS_DM Other Other -158 82 1 1 732 1710 25 17 17 chrUextra 19280253 19280493 -9724163 - NTS_DM Other Other 0 240 1 1 732 1756 17 17 17 chrUextra 19280493 19280733 -9723923 - NTS_DM Other Other 0 240 1 1 732 746 25 32 32 chrUextra 19280733 19280857 -9723799 - NTS_DM Other Other 0 240 117 1 732 768 104 0 0 chrUextra 19280957 19281082 -9723574 - ARS406_DM Unknown Unknown -228 125 1 1 732 2841 182 8 8 chrUextra 19280989 19281642 -9723014 + SAR_DM Satellite Satellite 195 847 -625 1 732 4683 56 60 13 chrUextra 19281743 19282429 -9722227 - R1_DM LINE R1 -4420 936 219 1 732 5911 6 0 0 chrUextra 19282529 19283215 -9721441 - R1_DM LINE R1 -617 4739 4054 1 732 621 14 0 0 chrUextra 19283315 19283388 -9721268 + R1_DM LINE R1 5284 5356 0 1 732 4284 66 3 3 chrUextra 19283421 19284001 -9720655 + R1_DM LINE R1 1 580 -4776 1 732 5541 13 0 1 chrUextra 19284101 19284787 -9719869 + QUASIMODO_I LTR Gypsy 4572 5256 -804 1 732 1018 71 24 6 chrUextra 19284887 19285057 -9719599 + DMSAT6 Satellite Satellite 298 470 0 1 732 2424 93 30 10 chrUextra 19285074 19285573 -9719083 + DMSAT6 Satellite Satellite 1 509 -3 1 732 2616 0 0 0 chrUextra 19285673 19285973 -9718683 + R2_DM LINE R2 3308 3607 0 1 732 3361 8 0 0 chrUextra 19285970 19286359 -9718297 + LSU-rRNA_Dme rRNA rRNA 2578 2966 -934 1 732 4430 128 0 0 chrUextra 19286459 19287145 -9717511 + HMSBEAGLE_I LTR Gypsy 5080 5765 -764 1 732 803 94 0 0 chrUextra 19287245 19287372 -9717284 - ARS406_DM Unknown Unknown -226 127 1 1 732 2815 175 29 9 chrUextra 19287279 19287930 -9716726 + SAR_DM Satellite Satellite 195 858 -614 1 732 335 283 0 9 chrUextra 19288529 19288636 -9716020 + Copia2_I LTR Copia 567 672 -3490 1 732 2230 144 154 29 chrUextra 19288818 19289491 -9715165 + TART LINE telomeric 9549 10176 -4301 1 732 760 64 96 0 chrUextra 19289603 19289728 -9714928 + ARS406_DM Unknown Unknown 53 189 -164 1 732 2956 176 22 8 chrUextra 19289620 19290289 -9714367 - SAR_DM Satellite Satellite -545 927 249 1 732 5708 18 19 0 chrUextra 19290389 19291075 -9713581 + Gypsy4_I LTR Gypsy 2060 2758 -3530 1 732 3053 165 12 10 chrUextra 19291175 19291861 -9712795 - SAR_DM Satellite Satellite -397 1075 389 1 732 5131 34 3 15 chrUextra 19291961 19292647 -9712009 + BATUMI_I LTR Pao 2652 3329 -4634 1 732 286 282 107 89 chrUextra 19292889 19293169 -9711487 - Invader1_LTR LTR Gypsy -55 368 84 1 732 256 151 0 36 chrUextra 19293378 19293433 -9711223 + DMLTR5 LTR Gypsy 44 96 -170 1 732 5761 1 0 1 chrUextra 19293533 19294197 -9710459 + LSU-rRNA_Dme rRNA rRNA 1970 2632 -1268 1 732 6034 1 0 0 chrUextra 19294319 19295005 -9709651 + R2_DM LINE R2 2905 3590 -17 1 732 306 264 0 0 chrUextra 19295341 19295432 -9709224 - DIVER2_I LTR Pao -1621 2526 2436 1 732 1800 5 0 5 chrUextra 19295891 19296109 -9708547 - DM176_LTR LTR Gypsy -290 217 1 1 732 3759 2 0 0 chrUextra 19296109 19296577 -9708079 - DM176_I LTR Gypsy 0 6420 5953 1 732 5599 20 15 0 chrUextra 19296677 19297363 -9707293 - FW_DM LINE Jockey -1000 3692 2997 1 732 5831 7 0 0 chrUextra 19297463 19298149 -9706507 + R1_DM LINE R1 2955 3640 -1716 1 732 5358 20 0 0 chrUextra 19298249 19298910 -9705746 + FW_DM LINE Jockey 2581 3241 -1451 1 732 5967 0 0 0 chrUextra 19299035 19299721 -9704935 + DMRT1A LINE R1 4047 4732 -451 1 732 938 301 32 27 chrUextra 19299875 19300459 -9704197 + Copia2_I LTR Copia 1392 2116 -2477 1 732 5418 3 1 4 chrUextra 19300607 19301293 -9703363 + MAX_I LTR Pao 373 1056 -6858 1 732 5019 13 99 0 chrUextra 19301393 19302079 -9702577 - STALKER4_I LTR Gypsy -3553 2977 2224 1 732 514 60 128 0 chrUextra 19302191 19302308 -9702348 - PROTOP DNA P -3797 683 552 1 732 2248 21 0 40 chrUextra 19302292 19302595 -9702061 + BATUMI_I LTR Pao 6994 7284 -679 1 732 1562 79 4 32 chrUextra 19302595 19302844 -9701812 + BATUMI_I LTR Pao 1 242 -7721 1 732 416 20 0 0 chrUextra 19302965 19303015 -9701641 - FW_DM LINE Jockey -4642 50 1 1 732 5053 34 0 2 chrUextra 19303023 19303651 -9701005 + R1_DM LINE R1 1377 2003 -3353 1 732 5395 15 45 0 chrUextra 19303751 19304437 -9700219 - R1_DM LINE R1 -4217 1139 423 1 732 34 24 0 0 chrUextra 19305141 19305182 -9699474 + AT_rich Low_complexity Low_complexity 1 41 0 1 732 5763 7 0 0 chrUextra 19305323 19306009 -9698647 + QUASIMODO_I LTR Gypsy 2324 3009 -3051 1 732 2903 179 12 7 chrUextra 19306117 19306794 -9697862 - SAR_DM Satellite Satellite -569 903 224 1 732 4220 44 1 3 chrUextra 19306895 19307581 -9697075 + Gypsy2_I LTR Gypsy 5459 6104 -31 1 732 2403 97 20 32 chrUextra 19307681 19308365 -9696291 - DMSAT6 Satellite Satellite -86 676 1 1 732 5716 1 0 0 chrUextra 19308466 19309151 -9695505 - ROO_I LTR Pao -7005 1251 567 1 732 5218 0 2 2 chrUextra 19309337 19309936 -9694720 - LSU-rRNA_Dme rRNA rRNA 0 3900 3302 1 732 2984 132 18 42 chrUextra 19310156 19310709 -9693947 - Gypsy12_LTR LTR Gypsy -23 2313 1774 1 732 2965 184 5 6 chrUextra 19310822 19311495 -9693161 - SAR_DM Satellite Satellite -577 895 224 1 732 442 99 0 0 chrUextra 19311433 19311504 -9693152 + ARS406_DM Unknown Unknown 1 71 -282 1 732 3197 165 9 9 chrUextra 19311609 19312288 -9692368 + SAR_DM Satellite Satellite 369 1047 -425 1 732 2738 178 31 22 chrUextra 19312391 19313073 -9691583 - SAR_DM Satellite Satellite -491 981 294 1 732 3509 2 0 0 chrUextra 19313460 19313861 -9690795 + ROO_LTR LTR Pao 1 401 -27 1 732 370 0 0 0 chrUextra 19313963 19314005 -9690651 + Invader3_LTR LTR Gypsy 257 298 0 1 732 4370 107 6 0 chrUextra 19314005 19314646 -9690010 - Gypsy12_I LTR Gypsy -2541 3005 2361 1 732 5956 1 1 0 chrUextra 19315531 19316216 -9688440 + LSU-rRNA_Dme rRNA rRNA 2084 2769 -1131 1 732 758 11 0 0 chrUextra 19316316 19316404 -9688252 - NTS_DM Other Other -152 88 1 1 732 1716 25 17 17 chrUextra 19316404 19316644 -9688012 - NTS_DM Other Other 0 240 1 1 732 1408 20 20 20 chrUextra 19316644 19316847 -9687809 - NTS_DM Other Other 0 240 38 1 732 817 0 0 0 chrUextra 19316847 19316943 -9687713 - NTS_DM Other Other -107 133 38 1 732 400 17 17 0 chrUextra 19316943 19317001 -9687655 - NTS_DM Other Other -107 133 75 1 732 5879 0 3 3 chrUextra 19317101 19317786 -9686870 + SSU-rRNA_Dme rRNA rRNA 956 1640 -355 1 732 3006 165 8 11 chrUextra 19317888 19318542 -9686114 + SAR_DM Satellite Satellite 425 1076 -396 1 732 280 143 0 18 chrUextra 19318514 19318571 -9686085 - XDMR_DM Unknown Unknown -7 353 298 1 732 5861 1 0 4 chrUextra 19318671 19319356 -9685300 + DOC LINE Jockey 3778 4459 -266 1 732 5774 1 4 4 chrUextra 19319456 19320141 -9684515 - LSU-rRNA_Dme rRNA rRNA -2195 1705 1021 1 732 26 30 0 0 chrUextra 19320294 19320327 -9684329 + AT_rich Low_complexity Low_complexity 1 33 0 1 732 23 68 0 0 chrUextra 19320373 19320417 -9684239 + AT_rich Low_complexity Low_complexity 1 44 0 1 732 1054 284 48 40 chrUextra 19321026 19321709 -9682947 - SAR_DM Satellite Satellite -408 1064 376 1 732 5534 19 3 4 chrUextra 19321811 19322496 -9682160 - Gypsy4_I LTR Gypsy -1490 4798 4115 1 732 1269 24 0 6 chrUextra 19322596 19322761 -9681895 - NTS_DM Other Other -76 164 1 1 732 1756 17 17 17 chrUextra 19322761 19323001 -9681655 - NTS_DM Other Other 0 240 1 1 732 1370 30 20 20 chrUextra 19323001 19323204 -9681452 - NTS_DM Other Other 0 240 38 1 732 620 0 0 0 chrUextra 19323204 19323281 -9681375 - NTS_DM Other Other -107 133 57 1 732 1203 7 0 19 chrUextra 19323381 19323535 -9681121 + NTS_DM Other Other 12 162 -78 1 732 488 119 36 0 chrUextra 19323646 19323730 -9680926 + NTS_DM Other Other 4 90 -150 1 732 28 48 0 0 chrUextra 19324003 19324045 -9680611 + AT_rich Low_complexity Low_complexity 1 42 0 1 732 2985 3 6 0 chrUextra 19324166 19324511 -9680145 + LSU-rRNA_Dme rRNA rRNA 2313 2659 -1241 1 732 2925 3 0 3 chrUextra 19324508 19324851 -9679805 + R1_DM LINE R1 4803 5144 -212 1 732 5954 0 0 0 chrUextra 19325736 19326421 -9678235 - BEL_I LTR Pao -3692 1712 1028 1 732 5614 28 0 0 chrUextra 19326521 19327206 -9677450 - R1_DM LINE R1 -1818 3538 2854 1 732 34 24 0 0 chrUextra 19327473 19327514 -9677142 + AT_rich Low_complexity Low_complexity 1 41 0 1 732 5846 4 1 0 chrUextra 19328096 19328776 -9675880 + STALKER4_I LTR Gypsy 3654 4334 -2196 1 732 3151 170 10 7 chrUextra 19328881 19329558 -9675098 - SAR_DM Satellite Satellite -425 1047 369 1 732 5228 12 34 0 chrUextra 19329661 19330346 -9674310 - STALKER4_I LTR Gypsy -66 6464 5757 1 732 22 0 0 0 chrUextra 19330638 19330660 -9673996 + AT_rich Low_complexity Low_complexity 1 22 0 1 732 5673 0 13 0 chrUextra 19331231 19331904 -9672752 - LSU-rRNA_Dme rRNA rRNA -3001 899 218 1 732 5527 26 1 0 chrUextra 19332016 19332701 -9671955 - NINJA_I LTR Pao -3864 2147 1462 1 732 3015 178 15 21 chrUextra 19332801 19333486 -9671170 + SAR_DM Satellite Satellite 1 680 -314 1 732 4529 30 0 128 chrUextra 19333590 19334271 -9670385 + CIRCE LINE Composite 1085 1678 -4678 1 732 5744 4 1 0 chrUextra 19334371 19335056 -9669600 + QUASIMODO_I LTR Gypsy 5138 5823 -237 1 732 644 176 76 46 chrUextra 19335637 19335834 -9668822 + DMCR1A LINE CR1 4227 4429 -41 1 732 2610 39 0 0 chrUextra 19335941 19336247 -9668409 + R1_DM LINE R1 1538 1843 -3513 1 732 3331 23 0 0 chrUextra 19336241 19336626 -9668030 + R1_DM LINE R1 2087 2471 -2885 1 732 5746 38 9 0 chrUextra 19336726 19337411 -9667245 + R1_DM LINE R1 2487 3177 -2179 1 732 832 0 21 0 chrUextra 19337511 19337607 -9667049 - LSU-rRNA_Dme rRNA rRNA -3802 98 1 1 732 34 24 0 0 chrUextra 19337896 19337937 -9666719 + AT_rich Low_complexity Low_complexity 1 41 0 1 732 23 68 0 0 chrUextra 19338376 19338420 -9666236 + AT_rich Low_complexity Low_complexity 1 44 0 1 732 29 60 0 0 chrUextra 19338466 19338516 -9666140 + AT_rich Low_complexity Low_complexity 1 50 0 1 732 1021 49 8 0 chrUextra 19338858 19338981 -9665675 - PROTOP DNA P 0 4480 4357 1 732 239 0 0 0 chrUextra 19339081 19339107 -9665549 + R1_DM LINE R1 5331 5356 0 1 732 4850 69 19 3 chrUextra 19339140 19339766 -9664890 + R1_DM LINE R1 1 636 -4720 1 732 6077 10 1 1 chrUextra 19340651 19341336 -9663320 - R1_DM LINE R1 -1004 4352 3668 1 732 3394 173 10 7 chrUextra 19341437 19342119 -9662537 - SAR_DM Satellite Satellite -577 895 212 1 732 2288 8 8 11 chrUextra 19342221 19342486 -9662170 + SSU-rRNA_Dme rRNA rRNA 1732 1995 0 1 732 21 89 0 0 chrUextra 19342506 19342562 -9662094 + AT_rich Low_complexity Low_complexity 1 56 0 1 732 3663 5 0 2 chrUextra 19343194 19343597 -9661059 + STALKER4_LTR LTR Gypsy 1 402 0 1 732 354 25 0 0 chrUextra 19343597 19343624 -9661032 + STALKER4_I LTR Gypsy 1 27 -6503 1 732 309 96 0 37 chrUextra 19343624 19343678 -9660978 + Stalker2_I LTR Gypsy 1 52 -7350 1 732 3432 144 4 4 chrUextra 19343791 19344476 -9660180 - BATUMI_I LTR Pao -3236 4678 3918 1 732 2516 94 3 34 chrUextra 19344576 19345260 -9659396 - DMSAT6 Satellite Satellite -84 662 1 1 732 2965 189 11 6 chrUextra 19345402 19346045 -9658611 + SAR_DM Satellite Satellite 377 1022 -450 1 732 22 0 0 0 chrUextra 19346511 19346533 -9658123 + AT_rich Low_complexity Low_complexity 1 22 0 1 732 224 185 31 0 chrUextra 19347041 19347106 -9657550 + (TAA)n Simple_repeat Simple_repeat 2 68 0 1 732 3439 172 10 7 chrUextra 19347716 19348400 -9656256 - SAR_DM Satellite Satellite -550 922 237 1 732 6045 6 3 3 chrUextra 19348501 19349186 -9655470 + R1_DM LINE R1 3327 4011 -1345 1 732 5988 20 9 0 chrUextra 19349286 19349971 -9654685 - Copia2_I LTR Copia -1193 2969 2279 1 732 1687 176 50 18 chrUextra 19350071 19350755 -9653901 + SAR_DM Satellite Satellite 1 706 -216 1 732 3063 186 12 12 chrUextra 19351644 19352323 -9652333 - SAR_DM Satellite Satellite -602 870 192 1 732 1602 270 61 12 chrUextra 19352437 19353025 -9651631 + Copia_I LTR Copia 1641 2257 -2336 1 732 1325 39 0 0 chrUextra 19353211 19353366 -9651290 + Invader3_LTR LTR Gypsy 144 298 0 1 732 2831 46 319 8 chrUextra 19353366 19353896 -9650760 + IVK_DM LINE I 1626 2320 -3082 1 732 2716 0 0 0 chrUextra 19353996 19354288 -9650368 + LSU-rRNA_Dme rRNA rRNA 3609 3900 0 1 732 241 163 0 58 chrUextra 19354389 19354441 -9650215 + LSU-rRNA_Dme rRNA rRNA 2570 2618 -1282 1 732 25 0 0 0 chrUextra 19354460 19354485 -9650171 + AT_rich Low_complexity Low_complexity 1 25 0 1 732 268 196 0 19 chrUextra 19354487 19354539 -9650117 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 732 265 150 0 0 chrUextra 19354591 19354631 -9650025 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 732 5847 5 6 11 chrUextra 19354802 19355466 -9649190 + MAX_I LTR Pao 1 661 -7253 1 732 6391 0 0 0 chrUextra 19355566 19356251 -9648405 - DOC LINE Jockey -490 4235 3551 1 732 879 207 29 5 chrUextra 19356356 19356560 -9648096 + TAHRE LINE telomeric 7035 7243 -3220 1 732 2146 171 52 31 chrUextra 19356560 19357036 -9647620 + TART LINE telomeric 9022 9507 -4970 1 732 6282 6 0 0 chrUextra 19357136 19357821 -9646835 - DMRT1A LINE R1 -2710 2473 1789 1 732 6340 3 0 1 chrUextra 19357921 19358606 -9646050 - LSU-rRNA_Dme rRNA rRNA -773 3127 2444 1 732 5959 22 29 0 chrUextra 19358706 19359391 -9645265 + FW_DM LINE Jockey 690 1394 -3298 1 732 1554 19 0 0 chrUextra 19359914 19360175 -9644481 + (TCTTG)n Simple_repeat Simple_repeat 1 261 0 1 732 6290 9 0 0 chrUextra 19361061 19361746 -9642910 + Gypsy6_I LTR Gypsy 2317 3001 -4011 1 732 3456 53 7 140 chrUextra 19361846 19362524 -9642132 - BATUMI_I LTR Pao -7084 879 292 1 732 6215 3 0 0 chrUextra 19362631 19363315 -9641341 + LSU-rRNA_Dme rRNA rRNA 423 1106 -2794 1 732 6262 1 3 3 chrUextra 19363416 19364101 -9640555 - LSU-rRNA_Dme rRNA rRNA -2344 1556 872 1 732 4826 26 2 5 chrUextra 19364311 19364886 -9639770 - CIRCE LINE Composite -1376 4980 4408 1 732 6274 0 0 0 chrUextra 19364988 19365671 -9638985 - BS2 LINE Jockey -1296 3425 2743 1 732 34 24 0 0 chrUextra 19365923 19365964 -9638692 + AT_rich Low_complexity Low_complexity 1 41 0 1 732 1213 7 0 0 chrUextra 19366556 19366693 -9637963 + DM176_I LTR Gypsy 6284 6420 0 1 732 3110 47 57 74 chrUextra 19366693 19367195 -9637461 + DM176_LTR LTR Gypsy 1 480 -27 1 732 396 22 0 0 chrUextra 19367195 19367241 -9637415 + DM176_I LTR Gypsy 1 46 -6374 1 732 4739 45 50 35 chrUextra 19368126 19368811 -9635845 - PROTOP_A DNA P -268 837 143 1 732 6246 0 0 1 chrUextra 19368911 19369596 -9635060 + ROO_I LTR Pao 3612 4295 -3961 1 732 5811 29 1 1 chrUextra 19369696 19370380 -9634276 - R1_DM LINE R1 -1011 4345 3662 1 732 6309 1 1 0 chrUextra 19370481 19371166 -9633490 - BS2 LINE Jockey -774 3947 3262 1 732 23 0 0 0 chrUextra 19371266 19371289 -9633367 + AT_rich Low_complexity Low_complexity 1 23 0 1 732 551 0 124 12 chrUextra 19371289 19371611 -9633045 + (TA)n Simple_repeat Simple_repeat 1 357 0 1 732 2801 9 6 15 chrUextra 19371616 19371950 -9632706 - DM297_LTR LTR Gypsy 0 414 84 1 732 6122 4 1 1 chrUextra 19372051 19372736 -9631920 + R1_DM LINE R1 3464 4148 -1208 1 732 6194 0 0 1 chrUextra 19373621 19374306 -9630350 + ROO_I LTR Pao 4728 5411 -2845 1 732 3535 166 7 6 chrUextra 19374417 19375091 -9629565 - SAR_DM Satellite Satellite -411 1061 387 1 732 6396 0 1 0 chrUextra 19375191 19375876 -9628780 - SSU-rRNA_Dme rRNA rRNA -899 1096 411 1 732 11704 87 14 1 chrUextra 19375976 19377446 -9627210 + R1_DM LINE R1 3484 4972 -384 1 732 3816 180 6 1 chrUextra 19377546 19378219 -9626437 + ROVER-I_DM LTR Gypsy 3603 4278 -2306 1 732 3238 181 7 7 chrUextra 19378331 19379004 -9625652 - SAR_DM Satellite Satellite -602 870 198 1 732 598 128 20 0 chrUextra 19378914 19379016 -9625640 + ARS406_DM Unknown Unknown 1 104 -249 1 732 5399 15 3 54 chrUextra 19379116 19379801 -9624855 + BATUMI_I LTR Pao 2246 2895 -5068 1 732 3099 177 12 15 chrUextra 19379909 19380586 -9624070 - SAR_DM Satellite Satellite -514 958 284 1 732 2679 113 8 3 chrUextra 19380686 19381059 -9623597 + NOMAD_I LTR Gypsy 4502 4876 -1696 1 732 1264 240 16 13 chrUextra 19381053 19381369 -9623287 - BS LINE Jockey -1297 3829 3513 1 732 3271 179 9 9 chrUextra 19381471 19382138 -9622518 + SAR_DM Satellite Satellite 410 1076 -396 1 732 1564 45 10 0 chrUextra 19382256 19382454 -9622202 - BATUMI_I LTR Pao -1337 6626 6427 1 732 3476 60 0 2 chrUextra 19382477 19382941 -9621715 + BATUMI_I LTR Pao 7303 7765 -198 1 732 4890 55 33 22 chrUextra 19383049 19383724 -9620932 + MAX_I LTR Pao 1217 1898 -6016 1 732 6291 6 0 0 chrUextra 19383826 19384511 -9620145 + R2_DM LINE R2 2520 3204 -403 1 732 6330 0 0 0 chrUextra 19384611 19385296 -9619360 - BS2 LINE Jockey -185 4536 3852 1 732 566 16 0 0 chrUextra 19385396 19385458 -9619198 - NTS_DM Other Other -178 62 1 1 732 1866 17 16 29 chrUextra 19385458 19385701 -9618955 - NTS_DM Other Other 0 240 1 1 732 1899 17 17 17 chrUextra 19385701 19385941 -9618715 - NTS_DM Other Other 0 240 1 1 732 935 22 29 29 chrUextra 19385941 19386081 -9618575 - NTS_DM Other Other 0 240 101 1 732 6270 0 1 0 chrUextra 19386181 19386866 -9617790 + R1_DM LINE R1 2180 2865 -2491 1 732 4097 0 0 51 chrUextra 19387165 19387651 -9617005 + LSU-rRNA_Dme rRNA rRNA 1 461 -3439 1 732 2387 198 17 42 chrUextra 19387798 19388340 -9616316 - Gypsy12_LTR LTR Gypsy -1808 528 1 1 732 714 72 0 0 chrUextra 19388339 19388436 -9616220 - Gypsy12_I LTR Gypsy 0 5546 5450 1 732 2894 176 8 9 chrUextra 19388536 19389191 -9615465 - SAR_DM Satellite Satellite -627 845 192 1 732 734 119 0 0 chrUextra 19389095 19389221 -9615435 + ARS406_DM Unknown Unknown 1 126 -227 1 732 705 12 0 0 chrUextra 19389321 19389403 -9615253 - NTS_DM Other Other -158 82 1 1 732 1744 21 17 17 chrUextra 19389403 19389643 -9615013 - NTS_DM Other Other 0 240 1 1 732 1756 17 17 17 chrUextra 19389643 19389883 -9614773 - NTS_DM Other Other 0 240 1 1 732 739 25 32 32 chrUextra 19389883 19390006 -9614650 - NTS_DM Other Other 0 240 118 1 732 5683 13 4 0 chrUextra 19390106 19390791 -9613865 + STALKER4_I LTR Gypsy 1661 2348 -4182 1 732 2670 220 7 6 chrUextra 19390891 19391572 -9613084 - Stalker2_I LTR Gypsy -1506 5896 5215 1 732 2582 19 0 3 chrUextra 19391676 19392001 -9612655 + FW_DM LINE Jockey 4365 4688 -4 1 732 2758 48 3 3 chrUextra 19392002 19392361 -9612295 - R1_DM LINE R1 -3966 1390 1032 1 732 1871 0 0 0 chrUextra 19392461 19392680 -9611976 - HMSBEAGLE_I LTR Gypsy -6310 219 1 1 732 2316 8 0 0 chrUextra 19392679 19392945 -9611711 - DMLTR5 LTR Gypsy 0 266 1 1 732 1634 25 5 0 chrUextra 19392945 19393146 -9611510 - ACCORD2_I LTR Gypsy -6128 1084 883 1 732 2658 189 24 22 chrUextra 19393251 19393931 -9610725 - SAR_DM Satellite Satellite -354 1118 438 1 732 1727 58 0 0 chrUextra 19394036 19394262 -9610394 + PROTOP DNA P 74 299 -4181 1 732 1860 53 104 4 chrUextra 19394249 19394716 -9609940 + PROTOP_A DNA P 522 899 -206 1 732 1926 96 25 0 chrUextra 19394817 19395099 -9609557 - Gypsy_I LTR Gypsy -756 5751 5463 1 732 231 139 0 0 chrUextra 19395100 19395143 -9609513 + G6_DM LINE Jockey 1 43 -1999 1 732 2368 0 32 0 chrUextra 19395601 19395880 -9608776 + G4_DM LINE Jockey 1374 1661 -2195 1 732 609 47 12 0 chrUextra 19395889 19395975 -9608681 + G4_DM LINE Jockey 1894 1980 -1876 1 732 2477 26 3 0 chrUextra 19395973 19396286 -9608370 + G4_DM LINE Jockey 2325 2638 -1218 1 732 5406 24 6 5 chrUextra 19396386 19397055 -9607601 - CIRCE LINE Composite -2717 3639 2970 1 732 5825 6 0 0 chrUextra 19397956 19398641 -9606015 + DOC LINE Jockey 1196 1880 -2845 1 733 3766 0 0 0 chrUextra 19398842 19399270 -9605386 + ROO_LTR LTR Pao 1 428 0 1 733 1369 0 0 0 chrUextra 19399270 19399426 -9605230 + ROO_I LTR Pao 1 156 -8100 1 733 2914 177 18 7 chrUextra 19399527 19400205 -9604451 - SAR_DM Satellite Satellite -593 879 195 1 733 712 92 0 0 chrUextra 19400311 19400420 -9604236 - ARS406_DM Unknown Unknown -244 109 1 1 733 2836 181 9 9 chrUextra 19400327 19400995 -9603661 + SAR_DM Satellite Satellite 195 862 -610 1 733 2839 169 20 13 chrUextra 19401098 19401781 -9602875 - SAR_DM Satellite Satellite -715 687 1 1 733 5697 13 0 0 chrUextra 19401881 19402566 -9602090 - R1_DM LINE R1 -4443 913 229 1 733 4684 0 0 0 chrUextra 19402666 19403215 -9601441 + FW_DM LINE Jockey 2633 3181 -1511 1 733 2193 97 15 24 chrUextra 19403452 19404136 -9600520 - DMSAT6 Satellite Satellite -30 677 1 1 733 5848 3 0 0 chrUextra 19404236 19404921 -9599735 + R1_DM LINE R1 1560 2244 -3112 1 733 5394 16 26 0 chrUextra 19405021 19405706 -9598950 + STALKER4_I LTR Gypsy 2988 3690 -2840 1 733 866 45 0 0 chrUextra 19405806 19405917 -9598739 - PROTOP_B DNA P -969 184 74 1 733 5925 4 0 0 chrUextra 19406591 19407276 -9597380 + R1_DM LINE R1 4089 4773 -583 1 733 3154 170 10 9 chrUextra 19407376 19408060 -9596596 + SAR_DM Satellite Satellite 333 1017 -455 1 733 838 42 8 0 chrUextra 19408161 19408281 -9596375 + G6_DM LINE Jockey 1922 2042 0 1 733 4735 11 0 0 chrUextra 19408284 19408846 -9595810 - S_DM DNA Tc1 -217 1519 958 1 733 5775 1 1 1 chrUextra 19408946 19409631 -9595025 - ROO_I LTR Pao -5905 2351 1667 1 733 416 32 0 16 chrUextra 19409731 19409795 -9594861 + NTS_DM Other Other 139 201 -39 1 733 870 9 0 27 chrUextra 19409847 19409959 -9594697 + NTS_DM Other Other 25 133 -107 1 733 1438 15 20 20 chrUextra 19409959 19410162 -9594494 + NTS_DM Other Other 38 240 0 1 733 1731 21 17 17 chrUextra 19410162 19410402 -9594254 + NTS_DM Other Other 1 240 0 1 733 2822 182 9 9 chrUextra 19411302 19411966 -9592690 - SAR_DM Satellite Satellite -614 858 195 1 733 647 124 0 0 chrUextra 19411873 19411986 -9592670 + ARS406_DM Unknown Unknown 1 113 -240 1 733 5803 1 1 7 chrUextra 19412086 19412771 -9591885 - LSU-rRNA_Dme rRNA rRNA -2423 1477 797 1 733 5342 15 1 39 chrUextra 19412871 19413556 -9591100 + CIRCE LINE Composite 8 666 -5690 1 733 5827 12 0 0 chrUextra 19413656 19414341 -9590315 - Gypsy4_I LTR Gypsy -4751 1537 853 1 733 2907 181 12 9 chrUextra 19414441 19415126 -9589530 + SAR_DM Satellite Satellite 297 983 -489 1 733 5428 19 0 0 chrUextra 19415226 19415911 -9588745 - IDEFIX_I LTR Gypsy -1370 4258 3574 1 733 1299 153 122 160 chrUextra 19416034 19416696 -9587960 + MAX_I LTR Pao 557 1193 -6721 1 733 2003 209 107 34 chrUextra 19416796 19417481 -9587175 - TAHRE LINE telomeric -469 9994 9260 1 733 4906 62 4 10 chrUextra 19417581 19418266 -9586390 + BATUMI_I LTR Pao 3032 3712 -4251 1 733 3909 9 0 0 chrUextra 19418366 19418821 -9585835 - DMRT1B LINE R1 -4728 455 1 1 733 2651 0 0 0 chrUextra 19419151 19419455 -9585201 + LSU-rRNA_Dme rRNA rRNA 3597 3900 0 1 733 22 56 0 0 chrUextra 19419527 19419563 -9585093 + AT_rich Low_complexity Low_complexity 1 36 0 1 733 246 150 0 0 chrUextra 19419568 19419608 -9585048 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 733 246 150 0 0 chrUextra 19419660 19419700 -9584956 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 733 2635 190 19 25 chrUextra 19419936 19420621 -9584035 + SAR_DM Satellite Satellite 1 681 -208 1 733 4710 99 3 1 chrUextra 19420721 19421406 -9583250 - Gypsy12_I LTR Gypsy -2409 3137 2452 1 733 2870 172 12 14 chrUextra 19421507 19422163 -9582493 - SAR_DM Satellite Satellite -486 986 332 1 733 1568 0 0 0 chrUextra 19422291 19422469 -9582187 + LSU-rRNA_Dme rRNA rRNA 3723 3900 0 1 733 22 56 0 0 chrUextra 19422541 19422577 -9582079 + AT_rich Low_complexity Low_complexity 1 36 0 1 733 246 150 0 0 chrUextra 19422582 19422622 -9582034 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 733 246 150 0 0 chrUextra 19422674 19422714 -9581942 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 733 246 150 0 0 chrUextra 19422766 19422806 -9581850 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 733 255 125 0 0 chrUextra 19422849 19422889 -9581767 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 733 22 56 0 0 chrUextra 19422902 19422938 -9581718 + AT_rich Low_complexity Low_complexity 1 36 0 1 733 497 0 53 40 chrUextra 19423077 19423153 -9581503 + NTS_DM Other Other 164 240 0 1 733 1718 17 17 21 chrUextra 19423153 19423394 -9581262 + NTS_DM Other Other 1 240 0 1 733 1836 8 17 13 chrUextra 19423394 19423633 -9581023 + NTS_DM Other Other 1 240 0 1 733 1089 8 0 0 chrUextra 19423633 19423761 -9580895 + NTS_DM Other Other 1 128 -112 1 733 4851 64 1 18 chrUextra 19423861 19424546 -9580110 - R1_DM LINE R1 -4568 788 115 1 733 5884 6 0 0 chrUextra 19424646 19425331 -9579325 + R1_DM LINE R1 1826 2510 -2846 1 733 5723 13 1 0 chrUextra 19425431 19426116 -9578540 - R1_DM LINE R1 -2330 3026 2341 1 733 5660 23 0 0 chrUextra 19426216 19426901 -9577755 + R1_DM LINE R1 3040 3724 -1632 1 733 5921 1 0 0 chrUextra 19427001 19427686 -9576970 + R1_DM LINE R1 1762 2446 -2910 1 733 4931 48 9 25 chrUextra 19427786 19428471 -9576185 + TART LINE telomeric 3053 3726 -10751 1 733 1775 13 17 21 chrUextra 19428574 19428815 -9575841 - NTS_DM Other Other 0 240 1 1 733 1408 20 20 20 chrUextra 19428815 19429018 -9575638 - NTS_DM Other Other 0 240 38 1 733 817 0 0 0 chrUextra 19429018 19429114 -9575542 - NTS_DM Other Other -107 133 38 1 733 832 9 9 27 chrUextra 19429114 19429225 -9575431 - NTS_DM Other Other -107 133 25 1 733 5609 13 1 4 chrUextra 19429356 19430041 -9574615 + R1_DM LINE R1 3551 4233 -1123 1 733 2906 185 7 7 chrUextra 19430145 19430825 -9573831 + SAR_DM Satellite Satellite 192 871 -601 1 733 913 23 0 8 chrUextra 19430926 19431057 -9573599 + NTS_DM Other Other 72 201 -39 1 733 870 9 0 27 chrUextra 19431109 19431221 -9573435 + NTS_DM Other Other 25 133 -107 1 733 1252 18 0 6 chrUextra 19431221 19431386 -9573270 + NTS_DM Other Other 38 201 -39 1 733 21 57 0 0 chrUextra 19431386 19431421 -9573235 + AT_rich Low_complexity Low_complexity 1 35 0 1 733 832 9 9 27 chrUextra 19431447 19431558 -9573098 + NTS_DM Other Other 25 133 -107 1 733 432 0 19 0 chrUextra 19431558 19431611 -9573045 + NTS_DM Other Other 38 91 -149 1 733 5698 4 0 0 chrUextra 19431711 19432396 -9572260 + Invader2_I LTR Gypsy 2098 2782 -1810 1 733 4679 41 4 9 chrUextra 19432496 19433181 -9571475 - PROTOP DNA P -3698 782 163 1 733 5881 4 0 0 chrUextra 19433281 19433965 -9570691 + R1_DM LINE R1 4492 5175 -181 1 733 5678 7 0 1 chrUextra 19434065 19434749 -9569907 + G6_DM LINE Jockey 142 824 -1218 1 733 5765 0 0 1 chrUextra 19434849 19435533 -9569123 - LSU-rRNA_Dme rRNA rRNA -2983 917 235 1 733 1827 0 0 0 chrUextra 19435633 19435840 -9568816 + SSU-rRNA_Dme rRNA rRNA 1789 1995 0 1 733 21 89 0 0 chrUextra 19435859 19435915 -9568741 + AT_rich Low_complexity Low_complexity 1 56 0 1 733 5597 26 0 1 chrUextra 19436417 19437101 -9567555 + MAX_I LTR Pao 6631 7313 -601 1 733 258 32 0 0 chrUextra 19437489 19437520 -9567136 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 1 733 5692 12 3 1 chrUextra 19437985 19438669 -9565987 + Invader1_I LTR Gypsy 2404 3088 -98 1 733 21 89 0 0 chrUextra 19439093 19439149 -9565507 + AT_rich Low_complexity Low_complexity 1 56 0 1 733 2383 3 3 7 chrUextra 19439168 19439453 -9565203 - SSU-rRNA_Dme rRNA rRNA 0 1995 1712 1 733 3463 42 48 2 chrUextra 19439553 19440034 -9564622 + PROTOP_A DNA P 603 1105 0 1 733 2216 15 4 11 chrUextra 19440337 19440612 -9564044 + BATUMI_I LTR Pao 6729 7001 -962 1 733 3193 61 7 7 chrUextra 19440572 19441021 -9563635 - BATUMI_I LTR Pao -1543 6420 6038 1 733 5376 32 9 0 chrUextra 19441121 19441805 -9562851 + MDG1_I LTR Gypsy 2682 3371 -3225 1 733 5289 34 35 0 chrUextra 19441905 19442589 -9562067 - DMCR1A LINE CR1 -125 4345 3638 1 733 5173 57 1 4 chrUextra 19442689 19443373 -9561283 + BATUMI_I LTR Pao 3517 4198 -3765 1 733 250 33 0 0 chrUextra 19443485 19443515 -9561141 - Baggins1 LINE LOA -697 4756 4727 1 733 27 29 0 0 chrUextra 19443754 19443788 -9560868 + AT_rich Low_complexity Low_complexity 1 34 0 1 733 378 22 0 0 chrUextra 19444111 19444156 -9560500 + Baggins1 LINE LOA 5346 5390 -63 1 733 2978 159 37 11 chrUextra 19444257 19444912 -9559744 + SAR_DM Satellite Satellite 390 1061 -411 1 733 859 32 0 75 chrUextra 19445062 19445196 -9559460 - DM176_LTR LTR Gypsy -383 124 1 1 733 4060 30 0 2 chrUextra 19445197 19445725 -9558931 - IDEFIX_I LTR Gypsy -971 4657 4131 1 733 487 16 32 0 chrUextra 19445825 19445887 -9558769 + MICROPIA_I LTR Gypsy 200 263 -4213 1 733 5346 11 0 0 chrUextra 19445885 19446509 -9558147 + MICROPIA_I LTR Gypsy 406 1029 -3447 1 733 852 120 7 14 chrUextra 19446623 19446896 -9557760 - RSP Satellite Satellite -6 271 1 1 733 836 82 0 14 chrUextra 19446935 19447216 -9557440 - RSP Satellite Satellite 0 277 1 1 733 1286 291 22 17 chrUextra 19448970 19449571 -9555085 + MICROPIA_I LTR Gypsy 2398 2970 -1506 1 733 326 345 14 24 chrUextra 19450090 19450404 -9554252 + Gypsy3_I LTR Gypsy 1219 1784 -5228 1 733 2648 185 15 23 chrUextra 19450529 19451213 -9553443 + SAR_DM Satellite Satellite 1 678 -396 1 733 667 72 10 0 chrUextra 19451313 19451410 -9553246 - R1_DM LINE R1 -5258 98 1 1 733 4255 25 6 0 chrUextra 19451443 19451964 -9552692 - R1_DM LINE R1 0 5356 4833 1 733 303 0 0 0 chrUextra 19451962 19451997 -9552659 - R1_DM LINE R1 -1697 3659 3625 1 733 5903 1 0 0 chrUextra 19452097 19452781 -9551875 + TAHRE LINE telomeric 9416 10099 -364 1 733 2346 106 19 50 chrUextra 19452881 19453565 -9551091 - DMSAT6 Satellite Satellite -73 663 1 1 733 5488 6 3 1 chrUextra 19453665 19454348 -9550308 + Invader2_I LTR Gypsy 1398 2081 -2511 1 733 5313 34 29 1 chrUextra 19454449 19455133 -9549523 + DMCR1A LINE CR1 3034 3736 -734 1 733 5562 9 1 0 chrUextra 19455233 19455917 -9548739 + DM297_I LTR Gypsy 1236 1920 -4247 1 733 3225 139 15 32 chrUextra 19456024 19456701 -9547955 + SAR_DM Satellite Satellite 369 1033 -439 1 733 4598 18 2 2 chrUextra 19456801 19457360 -9547296 + R1_DM LINE R1 3724 4282 -1074 1 733 891 19 0 0 chrUextra 19457380 19457485 -9547171 + R1_DM LINE R1 4407 4511 -845 1 733 4578 24 0 0 chrUextra 19458371 19458924 -9545732 - R1_DM LINE R1 -2803 2553 2001 1 733 753 86 94 0 chrUextra 19458936 19459053 -9545603 - R1_DM LINE R1 -3739 1617 1490 1 733 1974 9 0 0 chrUextra 19459181 19459413 -9545243 - MICROPIA_LTR LTR Gypsy -244 232 1 1 733 3423 16 0 2 chrUextra 19459413 19459837 -9544819 - MICROPIA_I LTR Gypsy 0 4476 4054 1 733 2995 161 57 27 chrUextra 19459959 19460621 -9544035 - TART LINE telomeric -10480 3997 3387 1 733 1837 33 12 4 chrUextra 19460721 19460965 -9543691 - IDEFIX_LTR LTR Gypsy -348 246 1 1 733 1380 98 34 11 chrUextra 19460965 19461267 -9543389 + Invader2_I LTR Gypsy 3419 3793 -799 1 733 856 77 8 1 chrUextra 19461271 19461403 -9543253 + Invader2_I LTR Gypsy 3861 3983 -609 1 733 208 273 47 8 chrUextra 19461721 19461850 -9542806 + T-rich Low_complexity Low_complexity 2 135 0 1 733 30 0 0 0 chrUextra 19461892 19461922 -9542734 + AT_rich Low_complexity Low_complexity 1 30 0 1 733 785 206 0 0 chrUextra 19462014 19462189 -9542467 - DM297_I LTR Gypsy -1864 4303 4129 1 733 2560 173 13 16 chrUextra 19462291 19462973 -9541683 + BATUMI_I LTR Pao 4203 4882 -3032 1 733 5715 16 1 4 chrUextra 19463073 19463757 -9540899 - BATUMI_I LTR Pao -2193 5770 5089 1 733 201 121 0 0 chrUextra 19463986 19464019 -9540637 + (TC)n Simple_repeat Simple_repeat 1 33 0 1 733 1505 178 21 6 chrUextra 19464644 19465306 -9539350 - SAR_DM Satellite Satellite -619 672 1 1 733 5626 23 0 0 chrUextra 19465425 19466109 -9538547 + R1_DM LINE R1 1550 2233 -3123 1 733 2583 29 0 0 chrUextra 19466209 19466524 -9538132 + R1_DM LINE R1 4519 4833 -523 1 733 3022 14 14 0 chrUextra 19466524 19466891 -9537765 - Stalker3_LTR LTR Gypsy 0 372 1 1 733 2598 196 15 13 chrUextra 19467003 19467677 -9536979 - SAR_DM Satellite Satellite -464 1008 334 1 733 1454 124 57 3 chrUextra 19468099 19468381 -9536275 + DNAREP1_DM LINE Penelope 1 297 -297 1 733 610 27 0 0 chrUextra 19468561 19468636 -9536020 - CIRCE LINE Composite -854 5502 5428 1 733 3328 29 4 43 chrUextra 19468723 19469188 -9535468 - CIRCE LINE Composite -929 5427 4981 1 733 5551 0 3 3 chrUextra 19469345 19470029 -9534627 + DM412 LTR Gypsy 818 1501 -5396 1 733 2381 97 35 19 chrUextra 19470129 19470813 -9533843 + DMSAT6 Satellite Satellite 1 695 -256 1 733 5701 12 4 1 chrUextra 19470913 19471596 -9533060 + R1_DM LINE R1 1821 2505 -2851 1 733 453 19 0 0 chrUextra 19471705 19471759 -9532897 + (TTCTC)n Simple_repeat Simple_repeat 4 57 0 1 733 1538 23 0 4 chrUextra 19475255 19475517 -9529139 + (GAAAA)n Simple_repeat Simple_repeat 1 260 0 1 733 393 236 0 0 chrUextra 19477188 19477315 -9527341 + (CAAA)n Simple_repeat Simple_repeat 4 130 0 1 733 4760 65 12 9 chrUextra 19477970 19478653 -9526003 + Gypsy3_I LTR Gypsy 4650 5938 -1074 1 733 236 16 0 125 chrUextra 19479365 19479437 -9525219 + (TAAAAA)n Simple_repeat Simple_repeat 2 64 0 1 733 5800 4 0 0 chrUextra 19479537 19480221 -9524435 - ROO_I LTR Pao -6628 1628 945 1 733 5890 3 0 0 chrUextra 19480321 19481005 -9523651 + R1_DM LINE R1 2699 3382 -1974 1 733 5697 3 13 0 chrUextra 19481107 19481789 -9522867 + DM176_I LTR Gypsy 4673 5363 -1057 1 733 4372 2 0 0 chrUextra 19481889 19482398 -9522258 + FW_DM LINE Jockey 4184 4692 0 1 733 884 59 3 17 chrUextra 19482715 19483357 -9521299 + RSP Satellite Satellite 1 633 0 1 733 569 34 0 11 chrUextra 19483458 19483548 -9521108 + NTS_DM Other Other 113 201 -39 1 733 870 9 0 27 chrUextra 19483600 19483712 -9520944 + NTS_DM Other Other 25 133 -107 1 733 1222 18 0 12 chrUextra 19483712 19483878 -9520778 + NTS_DM Other Other 38 201 -39 1 733 21 57 0 0 chrUextra 19483878 19483913 -9520743 + AT_rich Low_complexity Low_complexity 1 35 0 1 733 832 9 9 27 chrUextra 19483939 19484050 -9520606 + NTS_DM Other Other 25 133 -107 1 733 756 11 0 0 chrUextra 19484050 19484141 -9520515 + NTS_DM Other Other 38 128 -112 1 733 1238 36 0 18 chrUextra 19484241 19484412 -9520244 - NTS_DM Other Other -72 168 1 1 733 1438 15 20 20 chrUextra 19484412 19484615 -9520041 - NTS_DM Other Other 0 240 38 1 733 850 18 0 27 chrUextra 19484615 19484727 -9519929 - NTS_DM Other Other -107 133 25 1 733 1042 21 0 7 chrUextra 19484779 19484925 -9519731 - NTS_DM Other Other -39 201 57 1 733 22 56 0 0 chrUextra 19485073 19485109 -9519547 + AT_rich Low_complexity Low_complexity 1 36 0 1 733 255 125 0 0 chrUextra 19485122 19485162 -9519494 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 733 246 150 0 0 chrUextra 19485205 19485245 -9519411 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 733 246 150 0 0 chrUextra 19485297 19485337 -9519319 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 733 22 56 0 0 chrUextra 19485342 19485378 -9519278 + AT_rich Low_complexity Low_complexity 1 36 0 1 733 2256 0 0 0 chrUextra 19485450 19485709 -9518947 - LSU-rRNA_Dme rRNA rRNA 0 3900 3642 1 733 2384 97 16 13 chrUextra 19485809 19486489 -9518167 + DMSAT6 Satellite Satellite 1 681 -69 1 733 360 86 17 0 chrUextra 19486593 19486651 -9518005 - ARS406_DM Unknown Unknown -294 59 1 1 733 2868 173 42 9 chrUextra 19486602 19487277 -9517379 + SAR_DM Satellite Satellite 237 933 -539 1 733 920 71 7 20 chrUextra 19487377 19488061 -9516595 - RSP Satellite Satellite -83 675 1 1 733 920 74 4 19 chrUextra 19488163 19488828 -9515828 + RSP Satellite Satellite 1 655 0 1 733 720 90 0 0 chrUextra 19488945 19489056 -9515600 - ARS406_DM Unknown Unknown -242 111 1 1 733 2895 179 9 11 chrUextra 19488960 19489628 -9515028 + SAR_DM Satellite Satellite 192 858 -614 1 733 3118 171 9 7 chrUextra 19489741 19490413 -9514243 - SAR_DM Satellite Satellite -416 1056 384 1 733 2969 173 13 12 chrUextra 19490519 19491197 -9513459 + SAR_DM Satellite Satellite 195 873 -599 1 733 333 62 0 0 chrUextra 19491855 19491903 -9512753 + (CCA)n Simple_repeat Simple_repeat 1 48 0 1 733 345 0 0 0 chrUextra 19492081 19492120 -9512536 - NTS_DM Other Other -164 76 38 1 733 832 9 9 27 chrUextra 19492120 19492231 -9512425 - NTS_DM Other Other -107 133 25 1 733 21 57 0 0 chrUextra 19492257 19492292 -9512364 + AT_rich Low_complexity Low_complexity 1 35 0 1 733 1241 24 0 6 chrUextra 19492292 19492457 -9512199 - NTS_DM Other Other -39 201 38 1 733 870 9 0 27 chrUextra 19492457 19492569 -9512087 - NTS_DM Other Other -107 133 25 1 733 1019 21 0 7 chrUextra 19492621 19492765 -9511891 - NTS_DM Other Other -39 201 59 1 733 246 150 0 0 chrUextra 19492933 19492973 -9511683 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 733 22 56 0 0 chrUextra 19493071 19493107 -9511549 + AT_rich Low_complexity Low_complexity 1 36 0 1 733 3224 3 0 0 chrUextra 19493179 19493549 -9511107 - LSU-rRNA_Dme rRNA rRNA 0 3900 3531 1 733 362 0 0 0 chrUextra 19493649 19493690 -9510966 - NTS_DM Other Other -162 78 38 1 733 852 18 0 27 chrUextra 19493690 19493802 -9510854 - NTS_DM Other Other -107 133 25 1 733 1252 18 0 6 chrUextra 19493854 19494019 -9510637 - NTS_DM Other Other -39 201 38 1 733 870 9 0 27 chrUextra 19494019 19494131 -9510525 - NTS_DM Other Other -107 133 25 1 733 1063 20 7 7 chrUextra 19494183 19494333 -9510323 - NTS_DM Other Other -39 201 52 1 733 5705 19 0 1 chrUextra 19494433 19495117 -9509539 - MAX_I LTR Pao -4228 3686 3004 1 733 5616 23 0 0 chrUextra 19495217 19495901 -9508755 + FW_DM LINE Jockey 2388 3071 -1621 1 733 3923 92 81 27 chrUextra 19496018 19496685 -9507971 - Gypsy12_I LTR Gypsy -4495 1051 349 1 733 832 9 9 27 chrUextra 19496828 19496939 -9507717 + NTS_DM Other Other 25 133 -107 1 733 787 0 0 10 chrUextra 19496939 19497036 -9507620 + NTS_DM Other Other 38 133 -107 1 733 1408 20 20 20 chrUextra 19497036 19497239 -9507417 + NTS_DM Other Other 38 240 0 1 733 1657 18 18 18 chrUextra 19497239 19497468 -9507188 + NTS_DM Other Other 1 229 -11 1 733 2664 188 9 22 chrUextra 19497569 19498253 -9506403 - SAR_DM Satellite Satellite -356 1116 442 1 733 3116 164 9 10 chrUextra 19498353 19499035 -9505621 + SAR_DM Satellite Satellite 376 1056 -416 1 733 683 106 49 0 chrUextra 19499142 19499265 -9505391 + SAR_DM Satellite Satellite 326 454 -1018 1 733 452 127 14 31 chrUextra 19499301 19499454 -9505202 + FB4_DM DNA Tc1 2941 3070 -1019 1 733 565 142 9 0 chrUextra 19499363 19499476 -9505180 - FB4_DM DNA Tc1 -3376 713 600 1 733 854 167 31 0 chrUextra 19499474 19499666 -9504990 + SAR_DM Satellite Satellite 585 782 -690 1 733 694 154 29 0 chrUextra 19499678 19499814 -9504842 + SAR_DM Satellite Satellite 533 672 -800 1 733 607 26 0 0 chrUextra 19499923 19500000 -9504656 + ARS406_DM Unknown Unknown 83 159 -194 1 733 3560 271 47 24 chrUextra 19500016 19501364 -9503292 - SAR_DM Satellite Satellite -291 1378 1 1 733 938 104 0 0 chrUextra 19501245 19501389 -9503267 + ARS406_DM Unknown Unknown 1 144 -209 1 733 2923 175 9 22 chrUextra 19501489 19502156 -9502500 + SAR_DM Satellite Satellite 462 1119 -353 1 733 406 188 0 19 chrUextra 19502070 19502173 -9502483 - XDMR_DM Unknown Unknown 0 360 260 1 733 239 125 0 24 chrUextra 19502326 19502367 -9502289 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 733 22 56 0 0 chrUextra 19502380 19502416 -9502240 + AT_rich Low_complexity Low_complexity 1 36 0 1 733 907 9 0 27 chrUextra 19502442 19502554 -9502102 + NTS_DM Other Other 25 133 -107 1 733 1304 18 0 6 chrUextra 19502554 19502719 -9501937 + NTS_DM Other Other 38 201 -39 1 733 907 9 0 27 chrUextra 19502771 19502883 -9501773 + NTS_DM Other Other 25 133 -107 1 733 580 27 0 14 chrUextra 19502883 19502957 -9501699 + NTS_DM Other Other 38 110 -130 1 733 8127 210 53 78 chrUextra 19503057 19505152 -9499504 - LSU-rRNA_Dme rRNA rRNA -1857 2043 1 1 733 21 95 0 0 chrUextra 19505164 19505227 -9499429 + AT_rich Low_complexity Low_complexity 1 63 0 1 733 1041 95 0 0 chrUextra 19505411 19505889 -9498767 + (CAAGA)n Simple_repeat Simple_repeat 1 478 0 1 733 1056 96 0 0 chrUextra 19505896 19506073 -9498583 + (ACTAG)n Simple_repeat Simple_repeat 1 177 0 1 733 2434 103 18 24 chrUextra 19506193 19506848 -9497808 - DMSAT6 Satellite Satellite -25 651 1 1 733 6122 0 1 4 chrUextra 19506977 19507661 -9496995 - SSU-rRNA_Dme rRNA rRNA -371 1624 943 1 733 6125 3 1 0 chrUextra 19507761 19508445 -9496211 + DOC LINE Jockey 3994 4678 -47 1 733 2651 179 9 9 chrUextra 19508545 19509210 -9495446 - SAR_DM Satellite Satellite -436 665 1 1 733 721 107 0 9 chrUextra 19509116 19509229 -9495427 + ARS406_DM Unknown Unknown 1 112 -241 1 733 5957 1 0 1 chrUextra 19509329 19510013 -9494643 - ROO_I LTR Pao -4316 3940 3258 1 733 2956 174 31 21 chrUextra 19510114 19510793 -9493863 - SAR_DM Satellite Satellite -569 903 218 1 733 342 320 16 29 chrUextra 19510964 19511189 -9493467 - BLASTOPIA_I LTR Gypsy -1061 3925 3541 1 733 989 87 6 16 chrUextra 19511681 19512365 -9492291 + RSP Satellite Satellite 1 677 0 1 733 3048 173 10 15 chrUextra 19512465 19513147 -9491509 - SAR_DM Satellite Satellite -501 971 293 1 733 2677 198 36 18 chrUextra 19513249 19513917 -9490739 + SAR_DM Satellite Satellite 440 1119 -353 1 733 375 220 0 10 chrUextra 19513832 19513933 -9490723 - XDMR_DM Unknown Unknown 0 360 261 1 733 1277 164 24 17 chrUextra 19514818 19514851 -9489805 + SAR_DM Satellite Satellite 1 60 -1485 1 733 1087 83 0 0 chrUextra 19514851 19515008 -9489648 - ARS406_DM Unknown Unknown -166 187 31 1 733 1277 164 24 17 chrUextra 19515008 19515069 -9489587 + SAR_DM Satellite Satellite 61 172 -1373 1 733 1180 63 0 0 chrUextra 19515069 19515228 -9489428 - ARS406_DM Unknown Unknown -164 189 31 1 733 1277 164 24 17 chrUextra 19515228 19515501 -9489155 + SAR_DM Satellite Satellite 173 687 -858 1 733 3052 185 7 18 chrUextra 19515602 19516285 -9488371 - SAR_DM Satellite Satellite -365 1107 432 1 733 3710 257 20 42 chrUextra 19516385 19517844 -9486812 + SAR_DM Satellite Satellite 1 1425 -216 1 733 431 85 0 0 chrUextra 19517794 19517853 -9486803 - ARS406_DM Unknown Unknown -164 189 131 1 733 6173 0 6 0 chrUextra 19517955 19518637 -9486019 - LSU-rRNA_Dme rRNA rRNA -221 3679 2994 1 733 1220 7 0 20 chrUextra 19518737 19518888 -9485768 + NTS_DM Other Other 15 162 -78 1 733 514 119 36 0 chrUextra 19518999 19519083 -9485573 + NTS_DM Other Other 4 90 -150 1 733 28 48 0 0 chrUextra 19519356 19519398 -9485258 + AT_rich Low_complexity Low_complexity 1 42 0 1 733 3347 164 9 9 chrUextra 19519527 19520204 -9484452 - SAR_DM Satellite Satellite -425 1047 371 1 733 3174 179 13 7 chrUextra 19520305 19520988 -9483668 - SAR_DM Satellite Satellite -549 923 237 1 733 5731 7 13 9 chrUextra 19521089 19521773 -9482883 - MDG1_I LTR Gypsy -5661 935 249 1 733 773 19 0 0 chrUextra 19521873 19521977 -9482679 + G2_DM LINE Jockey 2998 3101 -1 1 733 21 95 0 0 chrUextra 19522174 19522237 -9482419 + AT_rich Low_complexity Low_complexity 1 63 0 1 733 2395 0 0 81 chrUextra 19522249 19522557 -9482099 + LSU-rRNA_Dme rRNA rRNA 1 283 -3617 1 733 301 102 20 0 chrUextra 19522657 19522706 -9481950 + ARS406_DM Unknown Unknown 140 189 -164 1 733 2956 165 12 4 chrUextra 19522663 19523328 -9481328 - SAR_DM Satellite Satellite -614 669 1 1 733 335 192 13 0 chrUextra 19523263 19523341 -9481315 + XDMR Unknown Unknown 282 360 -1 1 733 3288 164 13 13 chrUextra 19523441 19524125 -9480531 + SAR_DM Satellite Satellite 334 1017 -455 1 733 5619 27 12 6 chrUextra 19524227 19524909 -9479747 - NINJA_I LTR Pao -2790 3221 2536 1 733 1382 6 0 0 chrUextra 19525009 19525169 -9479487 - STALKER4_LTR LTR Gypsy -242 160 1 1 733 4121 17 4 0 chrUextra 19525169 19525693 -9478963 - STALKER4_I LTR Gypsy 0 6530 6005 1 733 2618 193 12 26 chrUextra 19525794 19526453 -9478203 + SAR_DM Satellite Satellite 469 1118 -354 1 733 382 215 0 18 chrUextra 19526367 19526476 -9478180 - XDMR_DM Unknown Unknown 0 360 254 1 733 1023 8 8 0 chrUextra 19526577 19526694 -9477962 - PROTOP_A DNA P -987 118 1 1 733 4537 26 0 2 chrUextra 19526694 19527238 -9477418 + NINJA_I LTR Pao 5469 6011 0 1 733 2705 187 42 17 chrUextra 19527362 19528045 -9476611 - SAR_DM Satellite Satellite -587 700 1 1 733 5626 12 48 12 chrUextra 19528147 19528829 -9475827 + FW_DM LINE Jockey 1706 2412 -2280 1 733 6092 0 0 3 chrUextra 19528929 19529613 -9475043 - ROO_I LTR Pao -5540 2716 2035 1 91 6218 1 0 0 chrUextra 19529713 19530397 -9474259 - ROO_I LTR Pao -620 7636 6953 1 734 5758 13 0 0 chrUextra 19530497 19531181 -9473475 + IDEFIX_I LTR Gypsy 4254 4937 -691 1 734 1537 235 16 16 chrUextra 19531281 19531820 -9472836 - Jockey2 LINE Jockey -1792 1636 1419 1 734 6170 0 0 1 chrUextra 19532065 19532749 -9471907 - DOC LINE Jockey -954 3771 3089 1 734 5588 22 0 4 chrUextra 19532849 19533533 -9471123 - CIRCE LINE Composite -1426 4930 4250 1 734 3108 182 9 9 chrUextra 19533634 19534317 -9470339 - SAR_DM Satellite Satellite -587 885 203 1 734 2338 159 26 16 chrUextra 19534417 19534454 -9470202 + SAR_DM Satellite Satellite 1 48 -1497 1 734 1180 63 0 0 chrUextra 19534454 19534613 -9470043 - ARS406_DM Unknown Unknown -164 189 31 1 734 2338 159 26 16 chrUextra 19534613 19535098 -9469558 + SAR_DM Satellite Satellite 49 687 -858 1 734 3000 172 9 26 chrUextra 19535202 19535883 -9468773 + SAR_DM Satellite Satellite 422 1090 -382 1 734 3417 228 57 39 chrUextra 19535990 19537453 -9467203 + SAR_DM Satellite Satellite 1 1489 -225 1 734 3062 182 9 9 chrUextra 19537562 19538237 -9466419 + SAR_DM Satellite Satellite 195 869 -603 1 734 2908 182 15 25 chrUextra 19538339 19539021 -9465635 - SAR_DM Satellite Satellite -352 1120 446 1 734 2975 179 28 16 chrUextra 19539131 19539805 -9464851 - SAR_DM Satellite Satellite -371 1101 420 1 734 866 10 10 0 chrUextra 19539905 19540004 -9464652 - PROTOP_A DNA P -1005 100 1 1 734 264 304 63 20 chrUextra 19540009 19540264 -9464392 + Gypsy5_I LTR Gypsy 4759 5024 -1485 1 734 6081 6 0 1 chrUextra 19542257 19542941 -9461715 + R1_DM LINE R1 4672 5354 -2 1 734 30 45 0 0 chrUextra 19543156 19543200 -9461456 + AT_rich Low_complexity Low_complexity 1 44 0 1 734 5295 12 3 67 chrUextra 19543825 19544509 -9460147 - LSU-rRNA_Dme rRNA rRNA -1660 2240 1601 1 734 1122 0 8 0 chrUextra 19544611 19544737 -9459919 - SSU-rRNA_Dme rRNA rRNA -1868 127 1 1 734 32 0 0 0 chrUextra 19544869 19544901 -9459755 + AT_rich Low_complexity Low_complexity 1 32 0 1 734 28 48 0 0 chrUextra 19545230 19545272 -9459384 + AT_rich Low_complexity Low_complexity 1 42 0 1 734 2377 184 27 6 chrUextra 19545393 19546073 -9458583 - SAR_DM Satellite Satellite -711 694 1 1 734 3129 180 9 10 chrUextra 19546177 19546852 -9457804 + SAR_DM Satellite Satellite 403 1076 -396 1 734 3392 0 3 3 chrUextra 19546961 19547336 -9457320 + SSU-rRNA_Dme rRNA rRNA 1621 1995 0 1 734 21 89 0 0 chrUextra 19547355 19547411 -9457245 + AT_rich Low_complexity Low_complexity 1 56 0 1 734 3601 33 7 0 chrUextra 19547769 19548195 -9456461 - DIVER2_I LTR Pao 0 4147 3719 1 734 1751 38 0 89 chrUextra 19548172 19548429 -9456227 - DIVER2_I LTR Pao -2572 1575 1342 1 734 5038 2 2 0 chrUextra 19548529 19549081 -9455575 + SSU-rRNA_Dme rRNA rRNA 1443 1995 0 1 734 21 89 0 0 chrUextra 19549597 19549653 -9455003 + AT_rich Low_complexity Low_complexity 1 56 0 1 734 2931 0 3 3 chrUextra 19549672 19549997 -9454659 - SSU-rRNA_Dme rRNA rRNA 0 1995 1671 1 734 842 0 0 0 chrUextra 19550098 19550190 -9454466 + R1_DM LINE R1 5265 5356 0 1 734 5387 2 0 2 chrUextra 19550188 19550781 -9453875 + LSU-rRNA_Dme rRNA rRNA 2640 3231 -669 1 734 5709 13 56 0 chrUextra 19550881 19551565 -9453091 + QUASIMODO_I LTR Gypsy 2648 3369 -2691 1 734 5783 35 0 4 chrUextra 19551668 19552349 -9452307 - BATUMI_I LTR Pao -1924 6039 5362 1 734 4357 34 205 0 chrUextra 19553233 19553861 -9450795 + PROTOP DNA P 655 1411 -3069 1 734 397 68 0 0 chrUextra 19553858 19553917 -9450739 + PROTOP_A DNA P 650 708 -397 1 734 6148 1 1 3 chrUextra 19554017 19554701 -9449955 - SSU-rRNA_Dme rRNA rRNA -634 1361 679 1 734 1698 21 0 0 chrUextra 19554801 19554994 -9449662 - PROTOP_A DNA P -912 193 1 1 734 2016 122 26 0 chrUextra 19554994 19555378 -9449278 + TART_B1 LINE telomeric 1851 2244 -8410 1 734 6031 10 0 0 chrUextra 19555585 19556269 -9448387 - ROO_I LTR Pao -5182 3074 2391 1 734 5859 6 0 0 chrUextra 19556369 19557053 -9447603 - R1_DM LINE R1 -188 5168 4485 1 734 1590 181 9 7 chrUextra 19557153 19557829 -9446827 + SAR_DM Satellite Satellite 1 677 -677 1 734 5572 18 3 0 chrUextra 19557937 19558621 -9446035 + PROTOP_A DNA P 4 689 -416 1 734 2852 181 7 19 chrUextra 19558723 19559405 -9445251 - SAR_DM Satellite Satellite -369 1103 430 1 734 3009 246 37 40 chrUextra 19559505 19560970 -9443686 + SAR_DM Satellite Satellite 1 1461 -416 1 734 4387 21 63 30 chrUextra 19561073 19561371 -9443285 - DM176_I LTR Gypsy -5593 827 535 1 734 180 0 0 0 chrUextra 19561371 19561391 -9443265 + (TA)n Simple_repeat Simple_repeat 2 21 0 1 734 181 30 29 57 chrUextra 19561399 19561434 -9443222 + (TTA)n Simple_repeat Simple_repeat 3 36 0 1 734 4387 21 63 30 chrUextra 19561434 19561757 -9442899 - DM176_I LTR Gypsy -5894 526 176 1 734 5627 1 0 0 chrUextra 19561857 19562541 -9442115 + DM176_I LTR Gypsy 854 1537 -4883 1 734 204 40 0 0 chrUextra 19563105 19563130 -9441526 + (TTG)n Simple_repeat Simple_repeat 2 26 0 1 734 1960 186 37 10 chrUextra 19564209 19564893 -9439763 - SAR_DM Satellite Satellite -667 702 1 1 734 2676 201 17 22 chrUextra 19564998 19565676 -9438980 + SAR_DM Satellite Satellite 1 674 -208 1 734 2103 121 11 27 chrUextra 19565777 19566450 -9438206 + DMSAT6 Satellite Satellite 1 661 -26 1 734 2608 199 5 8 chrUextra 19566565 19567208 -9437448 - SAR_DM Satellite Satellite -637 835 195 1 734 749 123 0 0 chrUextra 19567115 19567245 -9437411 + ARS406_DM Unknown Unknown 1 130 -223 1 734 1853 30 0 8 chrUextra 19567345 19567580 -9437076 - G_DM LINE Jockey -1461 2885 2653 1 734 246 150 0 0 chrUextra 19567630 19567670 -9436986 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 734 1462 28 18 32 chrUextra 19567740 19567959 -9436697 + NTS_DM Other Other 25 240 0 1 734 576 29 0 0 chrUextra 19567959 19568029 -9436627 + NTS_DM Other Other 1 70 -170 1 734 5542 3 5 8 chrUextra 19568129 19568798 -9435858 + LSU-rRNA_Dme rRNA rRNA 1122 1788 -2112 1 734 237 183 58 47 chrUextra 19569193 19569279 -9435377 + DNAREP1_DM LINE Penelope 34 120 -474 1 734 381 266 15 24 chrUextra 19569698 19569919 -9434737 - ZAM_I LTR Gypsy -2411 5079 4924 1 734 23 33 0 0 chrUextra 19570152 19570182 -9434474 + AT_rich Low_complexity Low_complexity 1 30 0 1 734 328 229 0 57 chrUextra 19570282 19570381 -9434275 - Gypsy5_I LTR Gypsy -2979 3530 3449 1 734 5109 19 2 2 chrUextra 19570481 19571101 -9433555 + R1_DM LINE R1 4737 5356 0 1 734 243 0 0 0 chrUextra 19571135 19571165 -9433491 + R1_DM LINE R1 1 30 -5326 1 734 5445 41 0 0 chrUextra 19571265 19571948 -9432708 + DIVER_I LTR Pao 3111 3793 -1850 1 734 5744 6 0 1 chrUextra 19572048 19572731 -9431925 - Gypsy4_I LTR Gypsy -671 5617 4936 1 734 360 194 9 19 chrUextra 19572832 19572937 -9431719 + XDMR_DM Unknown Unknown 257 360 0 1 734 2671 186 9 20 chrUextra 19572851 19573514 -9431142 - SAR_DM Satellite Satellite -353 1119 464 1 734 5536 0 0 0 chrUextra 19573657 19574297 -9430359 + QUASIMODO_LTR LTR Gypsy 1 640 -18 1 734 5829 0 0 1 chrUextra 19574397 19575079 -9429577 - R1_DM LINE R1 -2046 3310 2630 1 734 2944 169 35 10 chrUextra 19575180 19575861 -9428795 + SAR_DM Satellite Satellite 374 1071 -401 1 734 2684 182 20 28 chrUextra 19575963 19576646 -9428010 - SAR_DM Satellite Satellite -311 1161 484 1 734 5810 1 0 0 chrUextra 19576746 19577429 -9427227 + LSU-rRNA_Dme rRNA rRNA 433 1115 -2785 1 734 5448 27 0 13 chrUextra 19577529 19578212 -9426444 + FW_DM LINE Jockey 813 1486 -3206 1 734 5851 1 0 1 chrUextra 19578312 19578995 -9425661 + FW_DM LINE Jockey 3919 4600 -92 1 734 3134 158 8 9 chrUextra 19579095 19579753 -9424903 + SAR_DM Satellite Satellite 400 1056 -416 1 734 2224 108 28 25 chrUextra 19579879 19580561 -9424095 - DMSAT6 Satellite Satellite -3 684 1 1 734 2700 54 4 193 chrUextra 19580661 19581344 -9423312 + BATUMI_I LTR Pao 331 884 -7079 1 734 5256 11 17 0 chrUextra 19581444 19582087 -9422569 + STALKER4_I LTR Gypsy 1995 2648 -3882 1 734 1613 186 21 31 chrUextra 19582227 19582609 -9422047 - Gypsy12_LTR LTR Gypsy -1958 378 1 1 734 1719 78 202 3 chrUextra 19582609 19582910 -9421746 - Gypsy12_I LTR Gypsy 0 5546 5186 1 734 4336 88 0 40 chrUextra 19583793 19584476 -9420180 + Gypsy12_I LTR Gypsy 651 1306 -4240 1 734 5940 0 0 0 chrUextra 19584576 19585259 -9419397 - R1_DM LINE R1 -3013 2343 1661 1 734 2923 172 8 11 chrUextra 19585363 19586026 -9418630 - SAR_DM Satellite Satellite -620 852 192 1 734 670 107 0 9 chrUextra 19585929 19586042 -9418614 + ARS406_DM Unknown Unknown 1 112 -241 1 734 4653 37 143 1 chrUextra 19586145 19586825 -9417831 + R1_DM LINE R1 1086 1861 -3495 1 734 5781 12 1 1 chrUextra 19586925 19587608 -9417048 - BATUMI_I LTR Pao -2356 5607 4925 1 734 244 128 0 21 chrUextra 19587776 19587824 -9416832 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 734 3025 182 6 7 chrUextra 19588491 19589172 -9415484 + SAR_DM Satellite Satellite 250 929 -543 1 734 1771 173 21 10 chrUextra 19589277 19589957 -9414699 - SAR_DM Satellite Satellite -511 687 1 1 734 2278 0 8 0 chrUextra 19590057 19590322 -9414334 + SSU-rRNA_Dme rRNA rRNA 1729 1995 0 1 734 21 89 0 0 chrUextra 19590341 19590397 -9414259 + AT_rich Low_complexity Low_complexity 1 56 0 1 734 757 201 1 0 chrUextra 19591239 19591396 -9413260 - Gypsy3_I LTR Gypsy -4643 1534 1398 1 734 1176 0 0 0 chrUextra 19591768 19591903 -9412753 - 5S_DM RNA RNA 0 135 1 1 734 1176 0 0 0 chrUextra 19592137 19592272 -9412384 - 5S_DM RNA RNA 0 135 1 1 734 1233 38 0 0 chrUextra 19592930 19593089 -9411567 + (ATAAG)n Simple_repeat Simple_repeat 1 159 0 1 734 316 187 26 1 chrUextra 19593192 19593276 -9411380 + HETA LINE telomeric 5617 5693 -388 1 734 520 130 62 14 chrUextra 19593285 19593428 -9411228 + TART LINE telomeric 10370 10489 -3988 1 734 2793 45 0 51 chrUextra 19593477 19593872 -9410784 + PROTOP DNA P 1 375 -4105 1 734 1759 9 0 94 chrUextra 19593972 19594228 -9410428 - DM176_LTR LTR Gypsy -275 232 1 1 734 3366 12 0 0 chrUextra 19594228 19594655 -9410001 - DM176_I LTR Gypsy 0 6420 5994 1 734 2939 176 9 9 chrUextra 19594758 19595428 -9409228 + SAR_DM Satellite Satellite 234 903 -569 1 734 1133 8 0 0 chrUextra 19596321 19596452 -9408204 - R1_DM LINE R1 -1001 4355 4225 1 734 4830 2 0 0 chrUextra 19596450 19597004 -9407652 - LSU-rRNA_Dme rRNA rRNA -1257 2643 2090 1 734 2396 182 53 16 chrUextra 19597106 19597787 -9406869 + SAR_DM Satellite Satellite 296 1001 -471 1 734 2765 189 7 18 chrUextra 19597887 19598570 -9406086 - SAR_DM Satellite Satellite -369 1103 428 1 734 2657 184 16 20 chrUextra 19598670 19599352 -9405304 + SAR_DM Satellite Satellite 481 1159 -313 1 734 2328 14 3 0 chrUextra 19599453 19599735 -9404921 + R1_DM LINE R1 4784 5066 -290 1 734 943 35 0 0 chrUextra 19599732 19599846 -9404810 + R1_DM LINE R1 5243 5356 0 1 734 1740 78 16 0 chrUextra 19599879 19600136 -9404520 + R1_DM LINE R1 1 261 -5095 1 734 5731 0 0 0 chrUextra 19600236 19600919 -9403737 + HMSBEAGLE_I LTR Gypsy 84 766 -5763 1 734 884 74 6 21 chrUextra 19601038 19601702 -9402954 - RSP Satellite Satellite 0 654 1 1 734 2842 181 7 19 chrUextra 19601804 19602485 -9402171 - SAR_DM Satellite Satellite -361 1111 439 1 734 28 48 0 0 chrUextra 19602810 19602852 -9401804 + AT_rich Low_complexity Low_complexity 1 42 0 1 734 32 0 0 0 chrUextra 19603180 19603212 -9401444 + AT_rich Low_complexity Low_complexity 1 32 0 1 734 2362 100 10 38 chrUextra 19604151 19604834 -9399822 - DMSAT6 Satellite Satellite -23 664 1 1 734 4030 2 0 0 chrUextra 19604934 19605408 -9399248 - QUASIMODO_LTR LTR Gypsy -184 474 1 1 734 1156 100 0 21 chrUextra 19605423 19605617 -9399039 + QUASIMODO_LTR LTR Gypsy 52 241 -417 1 734 3419 10 0 0 chrUextra 19605717 19606116 -9398540 + DMRT1B LINE R1 4785 5183 0 1 734 1334 178 4 0 chrUextra 19606130 19606399 -9398257 + TART LINE telomeric 8952 9221 -5256 1 734 865 284 21 35 chrUextra 19606766 19607183 -9397473 + Copia2_I LTR Copia 1392 1895 -2267 1 734 23 0 0 0 chrUextra 19607299 19607322 -9397334 + AT_rich Low_complexity Low_complexity 1 23 0 1 734 2782 173 60 22 chrUextra 19608070 19608749 -9395907 - SAR_DM Satellite Satellite -435 1037 333 1 734 230 281 11 11 chrUextra 19609112 19609202 -9395454 - BLASTOPIA_I LTR Gypsy -1746 2735 2646 1 734 2947 183 7 7 chrUextra 19609632 19610314 -9394342 + SAR_DM Satellite Satellite 198 879 -593 1 734 684 81 10 1 chrUextra 19610415 19610526 -9394130 - Invader2_I LTR Gypsy -630 3962 3861 1 734 1380 101 34 11 chrUextra 19610530 19610832 -9393824 - Invader2_I LTR Gypsy -799 3793 3419 1 734 2001 38 11 4 chrUextra 19610832 19611098 -9393558 + IDEFIX_LTR LTR Gypsy 1 268 -326 1 734 2952 179 9 9 chrUextra 19611200 19611877 -9392779 - SAR_DM Satellite Satellite -397 1075 399 1 734 5468 38 3 0 chrUextra 19611981 19612664 -9391992 - R1_DM LINE R1 -1807 3549 2865 1 734 362 0 0 0 chrUextra 19612764 19612805 -9391851 - NTS_DM Other Other -162 78 38 1 734 870 9 0 27 chrUextra 19612805 19612917 -9391739 - NTS_DM Other Other -107 133 25 1 734 1252 18 0 6 chrUextra 19612970 19613135 -9391521 - NTS_DM Other Other -39 201 38 1 734 870 9 0 27 chrUextra 19613135 19613247 -9391409 - NTS_DM Other Other -107 133 25 1 734 22 56 0 0 chrUextra 19613273 19613309 -9391347 + AT_rich Low_complexity Low_complexity 1 36 0 1 734 255 125 0 0 chrUextra 19613322 19613362 -9391294 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 734 246 150 0 0 chrUextra 19613405 19613445 -9391211 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 734 5004 42 3 6 chrUextra 19613586 19614230 -9390426 - BATUMI_I LTR Pao -5356 2607 1966 1 734 314 328 16 11 chrUextra 19614660 19614851 -9389805 - BLASTOPIA_I LTR Gypsy -749 3732 3541 1 734 869 66 102 0 chrUextra 19615113 19615250 -9389406 + ARS406_DM Unknown Unknown 39 189 -164 1 734 2941 174 11 8 chrUextra 19615141 19615796 -9388860 - SAR_DM Satellite Satellite -549 923 267 1 734 548 42 0 0 chrUextra 19615896 19615967 -9388689 + DIVER2_I LTR Pao 4077 4147 0 1 734 3029 42 3 8 chrUextra 19615967 19616354 -9388302 + DIVER2_LTR LTR Pao 1 385 0 1 734 5735 0 1 0 chrUextra 19616679 19617359 -9387297 + ROO_I LTR Pao 3312 3992 -4264 1 734 2181 283 10 6 chrUextra 19618248 19618928 -9385728 - Gypsy6_I LTR Gypsy -276 6736 6054 1 734 586 115 0 9 chrUextra 19619030 19619135 -9385521 - ARS406_DM Unknown Unknown -249 104 1 1 734 2778 177 9 8 chrUextra 19619045 19619694 -9384962 + SAR_DM Satellite Satellite 198 847 -625 1 734 415 250 20 0 chrUextra 19619563 19619711 -9384945 - XDMR Unknown Unknown 0 361 211 1 734 420 185 0 0 chrUextra 19621165 19621273 -9383383 + (CATAA)n Simple_repeat Simple_repeat 2 109 0 1 734 587 132 0 0 chrUextra 19621377 19621483 -9383173 - ARS406_DM Unknown Unknown -247 106 1 1 734 2914 183 13 5 chrUextra 19621390 19622060 -9382596 + SAR_DM Satellite Satellite 195 870 -602 1 734 58 107 0 0 chrUextra 19622231 19622464 -9382192 + AT_rich Low_complexity Low_complexity 1 233 0 1 734 413 162 127 0 chrUextra 19622468 19622838 -9381818 + (TATATG)n Simple_repeat Simple_repeat 1 417 0 1 734 5473 32 1 3 chrUextra 19622943 19623626 -9381030 + R1_DM LINE R1 1964 2645 -2711 1 734 690 0 0 0 chrUextra 19623726 19623805 -9380851 - SSU-rRNA_Dme rRNA rRNA -1916 79 1 1 734 406 0 37 0 chrUextra 19623902 19623956 -9380700 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 734 28 48 0 0 chrUextra 19624175 19624217 -9380439 + AT_rich Low_complexity Low_complexity 1 42 0 1 734 1113 0 25 19 chrUextra 19624509 19624668 -9379988 + NTS_DM Other Other 81 240 0 1 734 1831 0 17 17 chrUextra 19624668 19624908 -9379748 + NTS_DM Other Other 1 240 0 1 734 1861 0 17 13 chrUextra 19624908 19625147 -9379509 + NTS_DM Other Other 1 240 0 1 734 392 0 0 0 chrUextra 19625147 19625192 -9379464 + NTS_DM Other Other 1 45 -195 1 734 5972 0 0 0 chrUextra 19625292 19625975 -9378681 + DM1731_I LTR Copia 2310 2992 -984 1 734 5741 7 1 0 chrUextra 19626860 19627541 -9377115 - FW_DM LINE Jockey -3834 858 177 1 734 2703 0 0 3 chrUextra 19627641 19627973 -9376683 + POGO DNA Pogo 1791 2121 0 1 734 5796 1 1 1 chrUextra 19628424 19629107 -9375549 - G_DM LINE Jockey -2093 2253 1571 1 734 542 91 0 0 chrUextra 19629211 19629299 -9375357 - MICROPIA_I LTR Gypsy -507 3969 3882 1 734 4253 44 34 0 chrUextra 19629324 19629890 -9374766 - TRANSIB2 DNA Transib -995 1849 1265 1 734 34 24 0 0 chrUextra 19630491 19630532 -9374124 + AT_rich Low_complexity Low_complexity 1 41 0 1 734 21 0 0 0 chrUextra 19630844 19630865 -9373791 + AT_rich Low_complexity Low_complexity 1 21 0 1 734 3769 82 42 6 chrUextra 19631556 19632181 -9372475 - STALKER4_I LTR Gypsy -4866 1664 1018 1 734 5766 7 0 1 chrUextra 19632342 19633022 -9371634 - DMRT1B LINE R1 -468 4715 4037 1 734 840 9 0 35 chrUextra 19633130 19633243 -9371413 - NTS_DM Other Other -107 133 25 1 734 22 56 0 0 chrUextra 19633269 19633305 -9371351 + AT_rich Low_complexity Low_complexity 1 36 0 1 734 255 125 0 0 chrUextra 19633318 19633358 -9371298 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 734 246 150 0 0 chrUextra 19633401 19633441 -9371215 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 734 246 150 0 0 chrUextra 19633493 19633533 -9371123 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 734 246 150 0 0 chrUextra 19633585 19633625 -9371031 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 734 22 56 0 0 chrUextra 19633630 19633666 -9370990 + AT_rich Low_complexity Low_complexity 1 36 0 1 734 560 15 0 0 chrUextra 19633738 19633805 -9370851 - LSU-rRNA_Dme rRNA rRNA 0 3900 3834 1 734 5879 0 1 0 chrUextra 19633905 19634588 -9370068 - R1_DM LINE R1 -3158 2198 1515 1 734 2759 178 15 9 chrUextra 19634688 19635336 -9369320 - SAR_DM Satellite Satellite -626 846 195 1 734 792 102 0 0 chrUextra 19635243 19635371 -9369285 + ARS406_DM Unknown Unknown 1 128 -225 1 734 4883 67 9 3 chrUextra 19635472 19636150 -9368506 + QUASIMODO_I LTR Gypsy 261 942 -5118 1 734 1492 5 0 0 chrUextra 19636254 19636438 -9368218 + ROO_I LTR Pao 8073 8256 0 1 734 3642 12 0 2 chrUextra 19636438 19636867 -9367789 + ROO_LTR LTR Pao 1 428 0 1 734 617 0 0 0 chrUextra 19636867 19636937 -9367719 + ROO_I LTR Pao 1 70 -8186 1 734 1229 25 0 12 chrUextra 19637037 19637202 -9367454 - NTS_DM Other Other -77 163 1 1 734 1756 17 17 17 chrUextra 19637202 19637442 -9367214 - NTS_DM Other Other 0 240 1 1 734 1438 15 20 20 chrUextra 19637442 19637645 -9367011 - NTS_DM Other Other 0 240 38 1 734 579 13 0 0 chrUextra 19637645 19637720 -9366936 - NTS_DM Other Other -107 133 59 1 734 1842 183 13 10 chrUextra 19637820 19638502 -9366154 - SAR_DM Satellite Satellite -845 683 1 1 734 5809 10 0 1 chrUextra 19638605 19639286 -9365370 + Gypsy4_I LTR Gypsy 2129 2808 -3480 1 734 227 89 12 12 chrUextra 19640169 19640249 -9364407 + S_DM DNA Tc1 109 188 -1548 1 734 22 56 0 0 chrUextra 19640363 19640399 -9364257 + AT_rich Low_complexity Low_complexity 1 36 0 1 734 5906 1 1 1 chrUextra 19640952 19641635 -9363021 + SSU-rRNA_Dme rRNA rRNA 616 1298 -697 1 734 34 24 0 0 chrUextra 19642289 19642330 -9362326 + AT_rich Low_complexity Low_complexity 1 41 0 1 734 391 113 0 27 chrUextra 19642609 19642673 -9361983 - DMTOM1_LTR LTR Gypsy 0 410 349 1 734 571 148 40 16 chrUextra 19642673 19642797 -9361859 - DMTOM1_LTR LTR Gypsy 0 410 284 1 734 254 190 17 0 chrUextra 19642814 19642872 -9361784 - DM176_LTR LTR Gypsy -141 366 308 1 734 248 133 22 0 chrUextra 19642991 19643036 -9361620 - DM176_LTR LTR Gypsy -238 269 224 1 734 5977 0 1 0 chrUextra 19643301 19643984 -9360672 - SSU-rRNA_Dme rRNA rRNA -1016 979 296 1 734 5873 3 0 3 chrUextra 19644084 19644766 -9359890 + SSU-rRNA_Dme rRNA rRNA 493 1172 -823 1 734 1605 9 19 14 chrUextra 19644867 19645081 -9359575 + NTS_DM Other Other 26 240 0 1 734 1301 6 0 18 chrUextra 19645081 19645246 -9359410 + NTS_DM Other Other 1 162 -78 1 734 488 119 36 0 chrUextra 19645356 19645440 -9359216 + NTS_DM Other Other 4 90 -150 1 734 293 111 19 0 chrUextra 19645650 19645704 -9358952 - ARS406_DM Unknown Unknown -297 56 2 1 734 2863 185 6 8 chrUextra 19645665 19646324 -9358332 + SAR_DM Satellite Satellite 246 903 -569 1 734 2863 207 48 7 chrUextra 19646433 19647113 -9357543 + TOM_I LTR Gypsy 2364 3071 -3041 1 734 697 193 0 7 chrUextra 19647619 19647765 -9356891 + DMLTR5 LTR Gypsy 122 266 0 1 734 351 49 65 16 chrUextra 19647764 19647826 -9356830 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 1 734 244 128 0 21 chrUextra 19647848 19647896 -9356760 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 734 313 279 107 89 chrUextra 19648191 19648471 -9356185 + Invader1_LTR LTR Gypsy 84 368 -55 1 734 285 305 20 20 chrUextra 19648985 19649148 -9355508 - Gypsy3_I LTR Gypsy -4829 1348 1218 1 734 5797 4 0 3 chrUextra 19649565 19650244 -9354412 + DOC LINE Jockey 3130 3806 -919 1 734 5491 32 0 0 chrUextra 19650348 19651031 -9353625 - R1_DM LINE R1 -2469 2887 2205 1 734 273 306 83 68 chrUextra 19651257 19651787 -9352869 - HMSBEAGLE_I LTR Gypsy -1567 4962 4425 1 734 448 48 0 0 chrUextra 19651915 19651978 -9352678 - S_DM DNA Tc1 -167 1569 1507 1 734 2357 86 29 7 chrUextra 19651977 19652388 -9352268 - S_DM DNA Tc1 -1316 420 1 1 734 1034 15 0 8 chrUextra 19652388 19652515 -9352141 - CIRCE LINE Composite -1861 4495 4370 1 734 266 69 30 121 chrUextra 19652515 19652581 -9352075 - ROVER-LTR_DM LTR Gypsy 0 367 308 1 734 1557 17 0 0 chrUextra 19652711 19652891 -9351765 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 734 2815 177 13 23 chrUextra 19653480 19654163 -9350493 + SAR_DM Satellite Satellite 436 1111 -361 1 734 5710 6 1 7 chrUextra 19654263 19654946 -9349710 + LSU-rRNA_Dme rRNA rRNA 758 1436 -2464 1 734 5314 31 7 4 chrUextra 19655829 19656512 -9348144 - MDG1_I LTR Gypsy -4538 2058 1374 1 734 254 188 16 0 chrUextra 19656616 19656680 -9347976 + XDMR Unknown Unknown 297 361 0 1 734 2775 172 12 27 chrUextra 19656625 19657295 -9347361 - SAR_DM Satellite Satellite -354 1118 459 1 734 2662 177 19 25 chrUextra 19657400 19658077 -9346579 + SAR_DM Satellite Satellite 180 852 -620 1 734 3293 0 3 0 chrUextra 19658180 19658557 -9346099 - LSU-rRNA_Dme rRNA rRNA -1735 2165 1788 1 734 2133 0 8 4 chrUextra 19658601 19658861 -9345795 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1528 1 734 2967 77 81 113 chrUextra 19658973 19659644 -9345012 + PROTOP_B DNA P 420 1068 -85 1 734 5822 3 1 3 chrUextra 19659745 19660427 -9344229 - LSU-rRNA_Dme rRNA rRNA -2441 1459 779 1 734 210 37 0 0 chrUextra 19660600 19660627 -9344029 + (GA)n Simple_repeat Simple_repeat 2 28 0 1 734 511 193 16 16 chrUextra 19660627 19660748 -9343908 + HETRP_DM Satellite Satellite 1549 1669 -203 1 735 192 40 0 0 chrUextra 19660906 19660931 -9343725 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 735 507 208 8 16 chrUextra 19660931 19661053 -9343603 + HETRP_DM Satellite Satellite 1549 1669 -203 1 735 1423 48 14 28 chrUextra 19661310 19661524 -9343132 + PROTOP_B DNA P 268 478 -675 1 735 3544 67 0 4 chrUextra 19661501 19661993 -9342663 + HOBO DNA hAT 330 819 -2197 1 735 2583 118 77 44 chrUextra 19662096 19662774 -9341882 + TART LINE telomeric 9359 9964 -499 1 735 4872 62 3 3 chrUextra 19662906 19663559 -9341097 + R1_DM LINE R1 1 653 -4703 1 735 5348 32 22 1 chrUextra 19663659 19664337 -9340319 - DMCR1A LINE CR1 -3472 998 307 1 735 5464 37 0 0 chrUextra 19664442 19665125 -9339531 - R1_DM LINE R1 -535 4821 4139 1 735 3012 183 7 6 chrUextra 19665227 19665904 -9338752 - SAR_DM Satellite Satellite -549 923 246 1 735 558 142 142 0 chrUextra 19666008 19666114 -9338542 + DM412 LTR Gypsy 6062 6182 -715 1 735 3294 31 28 0 chrUextra 19666117 19666540 -9338116 + PROTOP_A DNA P 1 435 -670 1 735 311 26 0 0 chrUextra 19666537 19666576 -9338080 + PROTOP_B DNA P 513 551 -602 1 735 750 61 0 0 chrUextra 19666575 19666674 -9337982 + PROTOP_B DNA P 985 1080 -73 1 735 5824 6 1 0 chrUextra 19666791 19667474 -9337182 + Gypsy6_I LTR Gypsy 1674 2357 -4655 1 735 5593 28 0 0 chrUextra 19667574 19668257 -9336399 + R1_DM LINE R1 1464 2146 -3210 1 735 5725 6 1 0 chrUextra 19668357 19669040 -9335616 - R1_DM LINE R1 -4452 904 221 1 735 28 48 0 0 chrUextra 19669264 19669306 -9335350 + AT_rich Low_complexity Low_complexity 1 42 0 1 735 488 119 36 0 chrUextra 19669579 19669663 -9334993 - NTS_DM Other Other -150 90 4 1 735 256 21 0 60 chrUextra 19669773 19669823 -9334833 - NTS_DM Other Other -78 162 116 1 735 24 67 0 0 chrUextra 19670218 19670263 -9334393 + AT_rich Low_complexity Low_complexity 1 45 0 1 735 1997 20 8 0 chrUextra 19670356 19670606 -9334050 + G2_DM LINE Jockey 2719 2970 -132 1 735 2698 190 18 10 chrUextra 19670718 19671389 -9333267 - SAR_DM Satellite Satellite -396 1076 401 1 735 1586 127 0 90 chrUextra 19671504 19671815 -9332841 + STALKER4_I LTR Gypsy 1912 2194 -4336 1 735 280 28 0 0 chrUextra 19671824 19671860 -9332796 + STALKER4_I LTR Gypsy 2315 2350 -4180 1 735 1446 100 29 0 chrUextra 19671862 19672103 -9332553 + STALKER4_I LTR Gypsy 2617 2864 -3666 1 735 464 0 14 57 chrUextra 19672102 19672172 -9332484 - Gypsy6A_LTR LTR Gypsy -70 350 284 1 735 4657 60 38 0 chrUextra 19672272 19672955 -9331701 + IDEFIX_I LTR Gypsy 4461 5169 -459 1 735 2679 190 8 18 chrUextra 19673055 19673738 -9330918 + SAR_DM Satellite Satellite 1 676 -361 1 735 58 15 0 0 chrUextra 19674107 19674172 -9330484 + AT_rich Low_complexity Low_complexity 1 65 0 1 735 21 36 0 0 chrUextra 19674346 19674374 -9330282 + AT_rich Low_complexity Low_complexity 1 28 0 1 735 862 338 17 11 chrUextra 19674626 19675090 -9329566 + Gypsy_I LTR Gypsy 4514 4980 -1527 1 735 2528 163 40 9 chrUextra 19675469 19676045 -9328611 + ROVER-I_DM LTR Gypsy 5990 6583 -1 1 735 1992 27 0 8 chrUextra 19676187 19676445 -9328211 - R1_DM LINE R1 -1350 4006 3751 1 735 3632 5 0 0 chrUextra 19676438 19676870 -9327786 - R1_DM LINE R1 -2215 3141 2710 1 735 2768 197 25 4 chrUextra 19676970 19677653 -9327003 - SAR_DM Satellite Satellite -441 1031 335 1 735 5371 38 0 0 chrUextra 19678536 19679219 -9325437 - IDEFIX_I LTR Gypsy -2967 2661 1979 1 735 4585 16 2 0 chrUextra 19679319 19679865 -9324791 + R1_DM LINE R1 4810 5356 0 1 735 1166 14 0 0 chrUextra 19679863 19680002 -9324654 + LSU-rRNA_Dme rRNA rRNA 2640 2778 -1122 1 735 2373 186 35 8 chrUextra 19680102 19680785 -9323871 - SAR_DM Satellite Satellite -667 701 1 1 735 5653 10 1 0 chrUextra 19680885 19681568 -9323088 + STALKER4_I LTR Gypsy 3314 3997 -2533 1 735 2685 181 44 3 chrUextra 19681668 19682331 -9322325 + SAR_DM Satellite Satellite 387 1076 -396 1 735 921 82 9 22 chrUextra 19682451 19683126 -9321530 + RSP Satellite Satellite 1 666 0 1 735 2479 186 23 12 chrUextra 19683234 19683917 -9320739 - SAR_DM Satellite Satellite -677 690 1 1 735 2996 176 6 8 chrUextra 19684021 19684680 -9319976 - SAR_DM Satellite Satellite -620 852 195 1 735 675 115 0 0 chrUextra 19684587 19684700 -9319956 + ARS406_DM Unknown Unknown 1 113 -240 1 735 3270 161 9 9 chrUextra 19684801 19685483 -9319173 + SAR_DM Satellite Satellite 352 1033 -439 1 735 2775 65 11 0 chrUextra 19685583 19685953 -9318703 - R1_DM LINE R1 -3726 1630 1257 1 735 2493 29 3 0 chrUextra 19685953 19686266 -9318390 - R1_DM LINE R1 -87 5269 4956 1 735 1740 177 25 9 chrUextra 19686463 19687031 -9317625 + SAR_DM Satellite Satellite 1 577 -749 1 735 803 136 0 0 chrUextra 19686909 19687049 -9317607 - ARS406_DM Unknown Unknown -164 189 50 1 735 5950 3 1 0 chrUextra 19687149 19687832 -9316824 - SSU-rRNA_Dme rRNA rRNA -1234 761 78 1 735 5839 4 0 1 chrUextra 19687932 19688615 -9316041 - R1_DM LINE R1 -353 5003 4322 1 735 288 283 9 9 chrUextra 19688723 19688837 -9315819 + DM297_I LTR Gypsy 2878 2991 -3176 1 735 474 315 68 7 chrUextra 19688980 19689308 -9315348 + Gypsy4_I LTR Gypsy 3190 3538 -2883 1 735 5828 6 0 1 chrUextra 19689498 19690181 -9314475 + R1_DM LINE R1 4519 5200 -156 1 735 2065 160 11 8 chrUextra 19690281 19690953 -9313703 - SAR_DM Satellite Satellite -430 673 1 1 735 3030 172 7 10 chrUextra 19691065 19691747 -9312909 + SAR_DM Satellite Satellite 199 878 -594 1 735 5899 0 0 1 chrUextra 19691847 19692530 -9312126 + DOC LINE Jockey 1875 2556 -2169 1 735 2687 48 56 3 chrUextra 19692630 19693004 -9311652 + PROTOP_A DNA P 712 1105 0 1 735 5964 0 0 1 chrUextra 19693413 19694096 -9310560 - LSU-rRNA_Dme rRNA rRNA -498 3402 2721 1 735 2906 182 10 10 chrUextra 19694196 19694879 -9309777 + SAR_DM Satellite Satellite 237 919 -553 1 735 3597 0 7 2 chrUextra 19694979 19695406 -9309250 + LSU-rRNA_Dme rRNA rRNA 1360 1788 -2112 1 735 1834 0 5 0 chrUextra 19695450 19695662 -9308994 + LSU-rRNA_Dme rRNA rRNA 1788 2000 -1900 1 735 5720 10 0 0 chrUextra 19695762 19696445 -9308211 + STALKER4_I LTR Gypsy 5161 5843 -687 1 735 1350 60 5 0 chrUextra 19696548 19696732 -9307924 - R1_DM LINE R1 -5171 185 1 1 735 3132 15 123 0 chrUextra 19696765 19697228 -9307428 - R1_DM LINE R1 0 5356 4837 1 735 5573 12 0 1 chrUextra 19697328 19698011 -9306645 + QUASIMODO_I LTR Gypsy 1214 1895 -4165 1 735 5852 0 1 4 chrUextra 19698111 19698794 -9305862 + SSU-rRNA_Dme rRNA rRNA 670 1350 -645 1 735 1079 0 16 0 chrUextra 19698894 19699020 -9305636 + (TATAA)n Simple_repeat Simple_repeat 1 128 0 1 735 2721 30 0 0 chrUextra 19699020 19699355 -9305301 - DM1731_LTR LTR Copia -1 335 1 1 735 1784 9 0 22 chrUextra 19699355 19699577 -9305079 - DM1731_I LTR Copia 0 3976 3760 1 735 246 250 0 0 chrUextra 19699715 19699771 -9304885 + Gypsy12A_LTR LTR Gypsy 409 464 -1816 1 735 1180 266 21 67 chrUextra 19699783 19700352 -9304304 + Gypsy12_LTR LTR Gypsy 524 1066 -1270 1 735 924 205 4 0 chrUextra 19700459 19700693 -9303963 - ROVER-I_DM LTR Gypsy -360 6224 5990 1 735 2187 163 2 2 chrUextra 19700728 19701141 -9303515 - ROVER-I_DM LTR Gypsy -1276 5308 4896 1 735 2945 19 3 3 chrUextra 19701241 19701604 -9303052 + R1_DM LINE R1 3724 4086 -1270 1 735 2544 37 0 0 chrUextra 19701602 19701923 -9302733 + R1_DM LINE R1 4559 4879 -477 1 735 5831 3 0 0 chrUextra 19702023 19702705 -9301951 - LSU-rRNA_Dme rRNA rRNA -2698 1202 521 1 735 5789 1 1 4 chrUextra 19702805 19703487 -9301169 + LSU-rRNA_Dme rRNA rRNA 694 1373 -2527 1 735 2518 29 0 0 chrUextra 19703587 19703895 -9300761 - PROTOP_A DNA P -797 308 1 1 735 5890 1 1 1 chrUextra 19704369 19705051 -9299605 + SSU-rRNA_Dme rRNA rRNA 557 1238 -757 1 735 2823 179 12 8 chrUextra 19705155 19705810 -9298846 - SAR_DM Satellite Satellite -620 852 195 1 735 686 113 0 0 chrUextra 19705717 19705832 -9298824 + ARS406_DM Unknown Unknown 1 115 -238 1 735 2700 175 18 24 chrUextra 19707501 19708179 -9296477 - SAR_DM Satellite Satellite -512 960 287 1 735 5902 1 0 0 chrUextra 19708279 19708961 -9295695 - BLOOD_I LTR Gypsy -2000 4613 3932 1 735 5726 16 0 4 chrUextra 19709061 19709743 -9294913 + BATUMI_I LTR Pao 5123 5801 -2162 1 735 2765 6 3 0 chrUextra 19709843 19710178 -9294478 + HETA LINE telomeric 5745 6080 -1 1 735 1817 79 9 18 chrUextra 19710200 19710525 -9294131 + HETA LINE telomeric 1 622 -5459 1 735 2185 140 17 53 chrUextra 19710637 19711307 -9293349 + DMSAT6 Satellite Satellite 1 645 -3 1 735 5281 34 31 9 chrUextra 19711407 19712089 -9292567 - DOC3_DM LINE Jockey -635 4105 3409 1 735 5256 37 3 9 chrUextra 19712189 19712871 -9291785 + BATUMI_I LTR Pao 3196 3873 -4090 1 735 2658 191 11 18 chrUextra 19712971 19713653 -9291003 - SAR_DM Satellite Satellite -1043 677 1 1 735 5579 15 4 3 chrUextra 19713753 19714435 -9290221 - R1_DM LINE R1 -1180 4176 3494 1 735 282 89 0 0 chrUextra 19714535 19714580 -9290076 - ARS406_DM Unknown Unknown -308 45 1 1 735 3014 163 9 19 chrUextra 19714540 19715217 -9289439 + SAR_DM Satellite Satellite 246 915 -557 1 735 5571 7 0 1 chrUextra 19715317 19715999 -9288657 - ROO_I LTR Pao -77 8179 7499 1 735 1827 13 9 22 chrUextra 19716099 19716331 -9288325 + DM1731_I LTR Copia 3748 3976 0 1 735 2483 36 0 0 chrUextra 19716331 19716639 -9288017 + DM1731_LTR LTR Copia 29 336 0 1 735 1565 0 0 0 chrUextra 19716881 19717062 -9287594 - ROO_LTR LTR Pao -247 181 1 1 735 4311 8 0 0 chrUextra 19717062 19717563 -9287093 - R1_DM LINE R1 -431 4925 4425 1 735 3665 2 2 0 chrUextra 19717663 19718084 -9286572 - SSU-rRNA_Dme rRNA rRNA -1573 422 1 1 735 32 0 0 0 chrUextra 19718216 19718248 -9286408 + AT_rich Low_complexity Low_complexity 1 32 0 1 735 2514 97 18 9 chrUextra 19718445 19719126 -9285530 - DMSAT6 Satellite Satellite -106 686 1 1 735 5884 3 0 0 chrUextra 19719227 19719909 -9284747 + R1_DM LINE R1 4651 5332 -24 1 735 5479 4 7 1 chrUextra 19720009 19720691 -9283965 + MDG1_I LTR Gypsy 1041 1726 -4870 1 735 5667 21 1 0 chrUextra 19720791 19721471 -9283185 + R1_DM LINE R1 4296 4976 -380 1 735 2968 168 22 9 chrUextra 19721573 19722250 -9282406 - SAR_DM Satellite Satellite -418 1054 369 1 735 691 0 0 12 chrUextra 19722355 19722438 -9282218 - NTS_DM Other Other -158 82 1 1 735 1847 4 17 13 chrUextra 19722438 19722677 -9281979 - NTS_DM Other Other 0 240 1 1 735 1861 0 17 13 chrUextra 19722677 19722916 -9281740 - NTS_DM Other Other 0 240 1 1 735 814 0 33 25 chrUextra 19722916 19723037 -9281619 - NTS_DM Other Other 0 240 119 1 735 5223 18 26 13 chrUextra 19723920 19724601 -9280055 + IVK_DM LINE I 1185 1874 -3528 1 735 5814 4 10 0 chrUextra 19724701 19725383 -9279273 + DOC2_DM LINE Jockey 3579 4267 -526 1 735 2690 221 18 13 chrUextra 19725483 19726165 -9278491 - ROVER-I_DM LTR Gypsy -4052 2532 1848 1 735 5725 9 7 0 chrUextra 19726265 19726947 -9277709 - DMRT1A LINE R1 -102 5081 4395 1 735 5121 2 3 69 chrUextra 19727047 19727729 -9276927 - LSU-rRNA_Dme rRNA rRNA -1891 2009 1373 1 735 5848 7 0 1 chrUextra 19727831 19728511 -9276145 - Gypsy6_I LTR Gypsy -1791 5221 4543 1 735 4549 108 3 4 chrUextra 19729393 19730074 -9274582 - Gypsy12_I LTR Gypsy -2652 2894 2215 1 735 5196 2 0 2 chrUextra 19730175 19730770 -9273886 - SSU-rRNA_Dme rRNA rRNA -1401 594 1 1 735 5584 19 1 1 chrUextra 19730961 19731639 -9273017 + FW_DM LINE Jockey 3816 4493 -199 1 735 5626 18 1 1 chrUextra 19731739 19732421 -9272235 + FW_DM LINE Jockey 3210 3891 -801 1 735 5891 4 0 0 chrUextra 19732521 19733203 -9271453 + R1_DM LINE R1 4216 4897 -459 1 735 5868 0 0 1 chrUextra 19733303 19733985 -9270671 - R1_DM LINE R1 -3362 1994 1314 1 735 1404 0 0 0 chrUextra 19734085 19734241 -9270415 + (GAGAA)n Simple_repeat Simple_repeat 4 159 0 1 735 5492 12 3 0 chrUextra 19734867 19735549 -9269107 - Invader2_I LTR Gypsy -913 3679 2996 1 735 2776 76 11 42 chrUextra 19735649 19736101 -9268555 - Gypsy12_I LTR Gypsy -5108 438 1 1 735 1245 129 9 22 chrUextra 19736101 19736330 -9268326 - Gypsy12A_LTR LTR Gypsy 0 2280 2055 1 735 5213 29 0 5 chrUextra 19736431 19737099 -9267557 + CIRCE LINE Composite 4316 4980 -1376 1 735 5188 50 22 0 chrUextra 19737213 19737895 -9266761 - Baggins1 LINE LOA -390 5063 4367 1 735 5403 18 4 12 chrUextra 19737996 19738677 -9265979 - BATUMI_I LTR Pao -5764 2199 1524 1 735 488 119 36 0 chrUextra 19738819 19738903 -9265753 - NTS_DM Other Other -150 90 4 1 735 1301 6 0 18 chrUextra 19739014 19739179 -9265477 - NTS_DM Other Other -78 162 1 1 735 1847 4 17 13 chrUextra 19739179 19739418 -9265238 - NTS_DM Other Other 0 240 1 1 735 2061 109 36 55 chrUextra 19739561 19740234 -9264422 - DMSAT6 Satellite Satellite -151 659 1 1 735 2298 210 39 18 chrUextra 19740342 19741015 -9263641 + SAR_DM Satellite Satellite 432 1118 -354 1 735 901 45 45 0 chrUextra 19741123 19741255 -9263401 + ARS406_DM Unknown Unknown 52 189 -164 1 735 2803 167 36 14 chrUextra 19741138 19741805 -9262851 - SAR_DM Satellite Satellite -535 937 256 1 735 2390 207 18 12 chrUextra 19741908 19742587 -9262069 - SAR_DM Satellite Satellite -511 961 279 1 735 1222 18 0 12 chrUextra 19742726 19742892 -9261764 - NTS_DM Other Other -39 201 38 1 735 870 9 0 27 chrUextra 19742892 19743004 -9261652 - NTS_DM Other Other -107 133 25 1 735 22 56 0 0 chrUextra 19743030 19743066 -9261590 + AT_rich Low_complexity Low_complexity 1 36 0 1 735 255 125 0 0 chrUextra 19743079 19743119 -9261537 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 735 246 150 0 0 chrUextra 19743162 19743202 -9261454 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 735 246 150 0 0 chrUextra 19743254 19743294 -9261362 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 735 383 0 0 0 chrUextra 19743469 19743520 -9261136 + Copia_I LTR Copia 4543 4593 0 1 735 2286 4 0 0 chrUextra 19743520 19743796 -9260860 + Copia_LTR LTR Copia 1 276 0 1 735 232 0 0 0 chrUextra 19743796 19743830 -9260826 + Copia_LTR LTR Copia 243 276 0 1 735 23 68 0 0 chrUextra 19743918 19743962 -9260694 + AT_rich Low_complexity Low_complexity 1 44 0 1 735 3126 0 0 0 chrUextra 19744251 19744605 -9260051 - ROO_LTR LTR Pao -74 354 1 1 735 2761 12 3 3 chrUextra 19744605 19744933 -9259723 + BEL_I LTR Pao 139 466 -4938 1 735 3460 16 0 54 chrUextra 19745815 19746276 -9258380 - LSU-rRNA_Dme rRNA rRNA -3464 436 1 1 735 5490 12 0 0 chrUextra 19746597 19747279 -9257377 + IDEFIX_I LTR Gypsy 4494 5175 -453 1 735 595 149 16 8 chrUextra 19747379 19747501 -9257155 - ARS406_DM Unknown Unknown -221 132 10 1 735 2559 187 34 6 chrUextra 19747414 19748056 -9256600 + SAR_DM Satellite Satellite 191 850 -622 1 735 235 105 0 0 chrUextra 19748023 19748061 -9256595 - ARS406_DM Unknown Unknown -166 187 150 1 735 3679 123 3 3 chrUextra 19748943 19749624 -9255032 - BATUMI_I LTR Pao -3298 4616 3860 1 735 2556 3 0 0 chrUextra 19749725 19750030 -9254626 - QUASIMODO_LTR LTR Gypsy -353 305 1 1 735 335 89 0 0 chrUextra 19750030 19750085 -9254571 - PROTOP_A DNA P -401 704 650 1 735 2252 17 17 24 chrUextra 19750113 19750407 -9254249 - PROTOP DNA P -3149 1331 1040 1 735 3363 146 9 9 chrUextra 19750512 19751176 -9253480 + SAR_DM Satellite Satellite 369 1032 -440 1 735 5923 3 0 0 chrUextra 19751289 19751971 -9252685 + DOC LINE Jockey 3315 3996 -729 1 735 917 173 146 30 chrUextra 19752071 19752399 -9252257 + Gypsy12_LTR LTR Gypsy 1310 1675 -661 1 735 539 206 109 39 chrUextra 19752377 19752660 -9251996 + Gypsy12_LTR LTR Gypsy 1443 1714 -566 1 735 515 121 8 0 chrUextra 19752659 19752753 -9251903 + Gypsy12A_LTR LTR Gypsy 1166 1329 -1007 1 735 5797 9 0 0 chrUextra 19752853 19753535 -9251121 + R1_DM LINE R1 2084 2765 -2591 1 735 4801 24 150 10 chrUextra 19753635 19754317 -9250339 - BATUMI_I LTR Pao -4398 3565 2789 1 735 5741 0 1 1 chrUextra 19754417 19755099 -9249557 + LSU-rRNA_Dme rRNA rRNA 384 1065 -2835 1 735 4005 6 0 0 chrUextra 19755199 19755689 -9248967 - IDEFIX_I LTR Gypsy -873 4755 4266 1 735 2803 183 15 12 chrUextra 19755988 19756663 -9247993 - SAR_DM Satellite Satellite -535 937 261 1 735 2635 48 160 102 chrUextra 19756834 19757301 -9247355 - ROO_I LTR Pao -7110 1146 642 1 735 366 129 0 0 chrUextra 19757301 19757363 -9247293 + (CTG)n Simple_repeat Simple_repeat 1 62 0 1 735 2635 48 160 102 chrUextra 19757363 19757445 -9247211 - ROO_I LTR Pao -7615 641 566 1 735 21 89 0 0 chrUextra 19757746 19757802 -9246854 + AT_rich Low_complexity Low_complexity 1 56 0 1 735 3521 5 2 0 chrUextra 19757821 19758227 -9246429 - SSU-rRNA_Dme rRNA rRNA 0 1995 1589 1 735 2920 167 13 16 chrUextra 19758332 19759009 -9245647 - SAR_DM Satellite Satellite -514 958 284 1 735 2926 191 7 12 chrUextra 19759109 19759791 -9244865 + SAR_DM Satellite Satellite 1 678 -396 1 735 2709 15 0 3 chrUextra 19759891 19760233 -9244423 + IDEFIX_I LTR Gypsy 5288 5628 0 1 735 2627 32 0 3 chrUextra 19760233 19760573 -9244083 + IDEFIX_LTR LTR Gypsy 1 339 -255 1 735 2963 161 37 16 chrUextra 19760673 19761355 -9243301 + SAR_DM Satellite Satellite 333 1028 -444 1 735 34 24 0 0 chrUextra 19761602 19761643 -9243013 + AT_rich Low_complexity Low_complexity 1 41 0 1 735 21 95 0 0 chrUextra 19761856 19761919 -9242737 + AT_rich Low_complexity Low_complexity 1 63 0 1 735 1785 0 0 0 chrUextra 19761931 19762137 -9242519 + LSU-rRNA_Dme rRNA rRNA 1 206 -3694 1 735 857 0 0 10 chrUextra 19763022 19763126 -9241530 + LSU-rRNA_Dme rRNA rRNA 1686 1788 -2112 1 735 4638 2 0 0 chrUextra 19763170 19763701 -9240955 + LSU-rRNA_Dme rRNA rRNA 1788 2318 -1582 1 735 3155 163 12 9 chrUextra 19763802 19764483 -9240173 - SAR_DM Satellite Satellite -449 1023 341 1 735 267 27 0 0 chrUextra 19764583 19764620 -9240036 + BATUMI_I LTR Pao 7248 7284 -679 1 735 2804 82 87 29 chrUextra 19764620 19765147 -9239509 + BATUMI_I LTR Pao 1 558 -7405 1 735 1022 0 0 0 chrUextra 19765148 19765265 -9239391 + DMRT1B LINE R1 1865 1981 -3202 1 735 3043 171 15 13 chrUextra 19765365 19766047 -9238609 + SAR_DM Satellite Satellite 248 930 -542 1 735 2136 121 9 19 chrUextra 19766147 19766826 -9237830 - DMSAT6 Satellite Satellite -112 671 1 1 735 2202 49 0 10 chrUextra 19766957 19767248 -9237408 + NINJA_LTR LTR Pao 30 317 0 1 735 1396 73 9 43 chrUextra 19767248 19767611 -9237045 + NINJA_I LTR Pao 1 483 -5528 1 735 5661 9 0 1 chrUextra 19767711 19768393 -9236263 - MDG1_I LTR Gypsy -2710 3886 3206 1 735 1831 97 4 0 chrUextra 19768493 19768772 -9235884 - STALKER4_I LTR Gypsy -530 6000 5721 1 735 3261 22 0 0 chrUextra 19768768 19769173 -9235483 - STALKER4_I LTR Gypsy -1330 5200 4796 1 735 3075 167 8 9 chrUextra 19769275 19769939 -9234717 + SAR_DM Satellite Satellite 414 1076 -396 1 735 2213 15 3 7 chrUextra 19770057 19770739 -9233917 + HETRP_DM Satellite Satellite 1 679 -1284 1 735 181 77 0 71 chrUextra 19770988 19771030 -9233626 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 1 735 22 35 0 0 chrUextra 19771063 19771092 -9233564 + AT_rich Low_complexity Low_complexity 1 29 0 1 735 490 299 34 26 chrUextra 19771150 19771415 -9233241 + IDEFIX_I LTR Gypsy 2541 2807 -2821 1 735 5777 1 0 0 chrUextra 19771621 19772303 -9232353 - ROO_I LTR Pao -4832 3424 2743 1 735 1665 0 10 5 chrUextra 19772403 19772609 -9232047 + LSU-rRNA_Dme rRNA rRNA 1582 1788 -2112 1 735 3761 5 0 0 chrUextra 19772653 19773085 -9231571 + LSU-rRNA_Dme rRNA rRNA 1788 2219 -1681 1 735 3028 166 16 10 chrUextra 19773971 19774646 -9230010 + SAR_DM Satellite Satellite 369 1047 -425 1 735 379 22 0 0 chrUextra 19774749 19774794 -9229862 - LSU-rRNA_Dme rRNA rRNA -1216 2684 2640 1 735 4815 2 0 2 chrUextra 19774792 19775350 -9229306 - R1_DM LINE R1 0 5356 4800 1 735 751 11 0 0 chrUextra 19775343 19775431 -9229225 - LSU-rRNA_Dme rRNA rRNA -1245 2655 2568 1 735 558 0 0 0 chrUextra 19775531 19775593 -9229063 + (TTGTG)n Simple_repeat Simple_repeat 4 65 0 1 735 980 153 5 0 chrUextra 19776313 19776502 -9228154 - SAR_DM Satellite Satellite -603 869 680 1 735 2178 172 15 6 chrUextra 19776518 19776993 -9227663 - SAR_DM Satellite Satellite -569 903 425 1 735 5876 1 3 1 chrUextra 19777095 19777777 -9226879 + LSU-rRNA_Dme rRNA rRNA 2558 3240 -660 1 735 2529 256 0 4 chrUextra 19777877 19778557 -9226099 - G2_DM LINE Jockey -1238 1864 1188 1 735 2356 91 12 45 chrUextra 19778663 19779334 -9225322 - DMSAT6 Satellite Satellite -75 648 1 1 735 3065 174 10 7 chrUextra 19779441 19780117 -9224539 + SAR_DM Satellite Satellite 384 1061 -411 1 735 2081 0 0 0 chrUextra 19780223 19780460 -9224196 + Invader2_LTR LTR Gypsy 30 266 0 1 735 3517 14 0 0 chrUextra 19780460 19780905 -9223751 + Invader2_I LTR Gypsy 1 445 -4147 1 735 1811 66 16 0 chrUextra 19781005 19781263 -9223393 - R1_DM LINE R1 -5094 262 1 1 735 943 35 0 0 chrUextra 19781296 19781410 -9223246 - R1_DM LINE R1 0 5356 5243 1 735 2285 14 4 0 chrUextra 19781407 19781684 -9222972 - R1_DM LINE R1 -290 5066 4789 1 735 3283 16 85 0 chrUextra 19781787 19782469 -9222187 - NINJA_I LTR Pao -2052 3959 3220 1 735 1317 123 61 4 chrUextra 19782989 19783251 -9221405 + DNAREP1_DM LINE Penelope 1 277 -317 1 735 224 185 31 0 chrUextra 19783796 19783861 -9220795 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 735 4590 86 72 13 chrUextra 19784133 19784815 -9219841 + Gypsy12_I LTR Gypsy 4677 5398 -148 1 735 1244 0 0 0 chrUextra 19784915 19785056 -9219600 + LSU-rRNA_Dme rRNA rRNA 2437 2577 -1323 1 735 4714 7 0 0 chrUextra 19785054 19785597 -9219059 + R2_DM LINE R2 2257 2799 -808 1 735 2909 176 12 10 chrUextra 19785697 19786379 -9218277 - SAR_DM Satellite Satellite -489 983 301 1 735 5641 1 0 1 chrUextra 19786479 19787161 -9217495 - BLOOD_I LTR Gypsy -296 6317 5637 1 735 2864 178 31 12 chrUextra 19788048 19788725 -9215931 + SAR_DM Satellite Satellite 230 919 -553 1 735 21 36 0 0 chrUextra 19789469 19789497 -9215159 + AT_rich Low_complexity Low_complexity 1 28 0 1 735 5739 9 1 1 chrUextra 19789607 19790289 -9214367 + R1_DM LINE R1 3811 4492 -864 1 735 2428 101 35 9 chrUextra 19790396 19791071 -9213585 - DMSAT6 Satellite Satellite 0 692 1 1 735 2666 177 12 25 chrUextra 19791174 19791851 -9212805 - SAR_DM Satellite Satellite -353 1119 452 1 736 5080 19 16 22 chrUextra 19791953 19792635 -9212021 - ROO_I LTR Pao -7479 777 100 1 736 5837 0 1 4 chrUextra 19792735 19793417 -9211239 + SSU-rRNA_Dme rRNA rRNA 507 1186 -809 1 736 1915 173 35 0 chrUextra 19793536 19793935 -9210721 - DM176_I LTR Gypsy 0 6420 6008 1 736 687 12 0 0 chrUextra 19794118 19794199 -9210457 - CIRCE LINE Composite -1376 4980 4900 1 736 5419 40 4 0 chrUextra 19794299 19794981 -9209675 + R1_DM LINE R1 1199 1883 -3473 1 736 5892 4 0 0 chrUextra 19795081 19795763 -9208893 + DOC LINE Jockey 3139 3820 -905 1 736 829 29 10 0 chrUextra 19795863 19795967 -9208689 + CIRCE LINE Composite 2810 2914 -3442 1 736 4666 17 9 5 chrUextra 19795968 19796545 -9208111 + CIRCE LINE Composite 3035 3613 -2743 1 736 5816 1 1 4 chrUextra 19796645 19797327 -9207329 + SSU-rRNA_Dme rRNA rRNA 681 1360 -635 1 736 5645 0 1 1 chrUextra 19798209 19798891 -9205765 + ROO_I LTR Pao 741 1422 -6834 1 736 720 148 43 54 chrUextra 19798991 19799177 -9205479 + ROVER-LTR_DM LTR Gypsy 184 367 0 1 736 395 165 13 0 chrUextra 19799177 19799256 -9205400 + ROVER-I_DM LTR Gypsy 1 80 -6504 1 736 180 0 0 0 chrUextra 19799298 19799318 -9205338 + (A)n Simple_repeat Simple_repeat 1 20 0 1 736 679 164 69 50 chrUextra 19799350 19799568 -9205088 + ROVER-I_DM LTR Gypsy 131 352 -6232 1 736 2258 10 13 13 chrUextra 19799773 19800090 -9204566 + STALKER4_I LTR Gypsy 6214 6530 0 1 736 3064 16 0 0 chrUextra 19800090 19800455 -9204201 + STALKER4_LTR LTR Gypsy 1 365 -37 1 736 2567 3 0 0 chrUextra 19800555 19800850 -9203806 + LSU-rRNA_Dme rRNA rRNA 2266 2560 -1340 1 736 3353 2 0 0 chrUextra 19800843 19801237 -9203419 + R2_DM LINE R2 507 900 -2707 1 736 5730 1 4 3 chrUextra 19801344 19802019 -9202637 + LSU-rRNA_Dme rRNA rRNA 962 1637 -2263 1 736 2809 171 15 11 chrUextra 19802147 19802796 -9201860 - SAR_DM Satellite Satellite -396 1076 425 1 736 5512 29 0 0 chrUextra 19802902 19803583 -9201073 - R1_DM LINE R1 -2294 3062 2382 1 736 2777 170 15 28 chrUextra 19803686 19804365 -9200291 - SAR_DM Satellite Satellite -359 1113 444 1 736 5430 13 0 7 chrUextra 19804465 19805147 -9199509 - FW_DM LINE Jockey -1422 3270 2594 1 736 415 222 8 25 chrUextra 19805247 19805367 -9199289 + HETRP_DM Satellite Satellite 1565 1682 -190 1 736 246 32 0 0 chrUextra 19805511 19805542 -9199114 + (GA)n Simple_repeat Simple_repeat 2 32 0 1 736 478 226 7 22 chrUextra 19805542 19805678 -9198978 + HETRP_DM Satellite Satellite 1549 1682 -190 1 736 246 32 0 0 chrUextra 19805822 19805853 -9198803 + (GA)n Simple_repeat Simple_repeat 2 32 0 1 736 271 227 13 13 chrUextra 19805853 19805929 -9198727 + HETRP_DM Satellite Satellite 1549 1624 -248 1 736 5457 28 0 0 chrUextra 19806029 19806711 -9197945 - MDG1_I LTR Gypsy -4030 2566 1885 1 736 976 31 0 0 chrUextra 19806811 19806941 -9197715 - NTS_DM Other Other -73 167 38 1 736 870 9 0 27 chrUextra 19806941 19807053 -9197603 - NTS_DM Other Other -107 133 25 1 736 1252 18 0 6 chrUextra 19807105 19807270 -9197386 - NTS_DM Other Other -39 201 38 1 736 870 9 0 27 chrUextra 19807270 19807382 -9197274 - NTS_DM Other Other -107 133 25 1 736 385 35 0 17 chrUextra 19807434 19807493 -9197163 - NTS_DM Other Other -39 201 144 1 736 2388 178 98 26 chrUextra 19807593 19808275 -9196381 + SAR_DM Satellite Satellite 228 958 -514 1 736 1542 0 10 10 chrUextra 19808376 19808571 -9196085 + LSU-rRNA_Dme rRNA rRNA 1594 1788 -2112 1 736 3862 2 0 0 chrUextra 19808615 19809057 -9195599 + LSU-rRNA_Dme rRNA rRNA 1788 2229 -1671 1 736 5457 29 1 1 chrUextra 19809157 19809839 -9194817 + NINJA_I LTR Pao 4572 5253 -758 1 736 2237 11 0 0 chrUextra 19809939 19810209 -9194447 - STALKER4_I LTR Gypsy -3396 3134 2865 1 736 3357 15 0 0 chrUextra 19810214 19810621 -9194035 - STALKER4_I LTR Gypsy -3795 2735 2329 1 736 5723 16 0 0 chrUextra 19810721 19811403 -9193253 + FW_DM LINE Jockey 3864 4545 -147 1 736 393 140 342 0 chrUextra 19811571 19811685 -9192971 + FB4_DM DNA Tc1 3937 4089 0 1 736 372 186 157 0 chrUextra 19811763 19811865 -9192791 - PROTOP DNA P -2895 1585 1468 1 736 241 262 0 48 chrUextra 19811856 19811940 -9192716 - PROTOP DNA P -3950 530 451 1 736 1418 63 44 0 chrUextra 19811979 19812185 -9192471 - PROTOP DNA P -4178 302 88 1 736 5766 12 0 0 chrUextra 19812285 19812967 -9191689 + R1_DM LINE R1 4361 5042 -314 1 736 5807 16 0 1 chrUextra 19813067 19813749 -9190907 - R2_DM LINE R2 -1380 2227 1547 1 736 5844 1 1 1 chrUextra 19814631 19815313 -9189343 + R1_DM LINE R1 4588 5269 -87 1 736 21 89 0 0 chrUextra 19816006 19816062 -9188594 + AT_rich Low_complexity Low_complexity 1 56 0 1 736 2931 174 12 9 chrUextra 19816207 19816876 -9187780 + SAR_DM Satellite Satellite 192 862 -610 1 736 695 0 0 0 chrUextra 19816977 19817056 -9187600 - MAX_I LTR Pao -7835 79 1 1 736 2705 16 0 0 chrUextra 19817056 19817377 -9187279 - MAX_LTR LTR Pao 0 321 1 1 736 1415 46 0 8 chrUextra 19817383 19817644 -9187012 + (TATAA)n Simple_repeat Simple_repeat 1 258 0 1 736 2340 101 15 32 chrUextra 19817759 19818435 -9186221 + DMSAT6 Satellite Satellite 1 664 -74 1 736 5608 12 9 0 chrUextra 19818541 19819223 -9185433 - FW_DM LINE Jockey -1689 3003 2316 1 736 3102 0 6 0 chrUextra 19819323 19819681 -9184975 + SSU-rRNA_Dme rRNA rRNA 1636 1995 0 1 736 21 89 0 0 chrUextra 19819700 19819756 -9184900 + AT_rich Low_complexity Low_complexity 1 56 0 1 736 5566 15 6 4 chrUextra 19820105 19820787 -9183869 - MICROPIA_I LTR Gypsy -214 4262 3580 1 736 2163 80 77 30 chrUextra 19820920 19821055 -9183601 + ACCORD2_I LTR Gypsy 6825 6977 -235 1 736 185 0 40 0 chrUextra 19821055 19821080 -9183576 + (TAA)n Simple_repeat Simple_repeat 1 26 0 1 736 2163 80 77 30 chrUextra 19821080 19821305 -9183351 + ACCORD2_I LTR Gypsy 6978 7201 -11 1 736 519 218 61 79 chrUextra 19821305 19821519 -9183137 + ACCORD2_LTR LTR Gypsy 1 210 -5 1 736 823 27 0 0 chrUextra 19822238 19822349 -9182307 - ALUII_DM Unknown Unknown 0 240 130 1 736 875 0 10 0 chrUextra 19822451 19822554 -9182102 - QUASIMODO_I LTR Gypsy -5956 104 1 1 736 4840 10 0 3 chrUextra 19822554 19823132 -9181524 - QUASIMODO_LTR LTR Gypsy 0 658 83 1 736 3106 169 9 9 chrUextra 19823233 19823912 -9180744 + SAR_DM Satellite Satellite 369 1047 -425 1 736 5689 15 1 0 chrUextra 19824015 19824697 -9179959 - STALKER4_I LTR Gypsy -1692 4838 4156 1 736 2957 172 12 12 chrUextra 19824797 19825478 -9179178 + SAR_DM Satellite Satellite 346 1026 -446 1 736 5702 6 3 1 chrUextra 19825578 19826259 -9178397 + R1_DM LINE R1 3263 3944 -1412 1 736 4539 5 4 9 chrUextra 19826359 19826918 -9177738 + DOC LINE Jockey 4166 4721 -4 1 736 1363 65 35 0 chrUextra 19827434 19827634 -9177022 + TC1_DM DNA Tc1 1 207 -1459 1 736 1216 86 143 0 chrUextra 19827612 19827821 -9176835 + TC1_DM DNA Tc1 1083 1321 -345 1 736 4980 2 0 7 chrUextra 19827921 19828497 -9176159 - SSU-rRNA_Dme rRNA rRNA -1423 572 1 1 736 5752 3 0 0 chrUextra 19828702 19829383 -9175273 + LSU-rRNA_Dme rRNA rRNA 400 1080 -2820 1 736 3978 15 0 0 chrUextra 19829483 19829954 -9174702 - R1_DM LINE R1 -860 4496 4026 1 736 1579 15 0 25 chrUextra 19829964 19830164 -9174492 - R1_DM LINE R1 -1690 3666 3472 1 736 4254 27 5 43 chrUextra 19830314 19830937 -9173719 + DOC5_DM LINE Jockey 3979 4577 -105 1 736 34 24 0 0 chrUextra 19831646 19831687 -9172969 + AT_rich Low_complexity Low_complexity 1 41 0 1 736 2223 77 23 40 chrUextra 19831826 19832344 -9172312 - NINJA_I LTR Pao -5544 467 1 1 736 983 67 6 80 chrUextra 19832344 19832507 -9172149 - NINJA_LTR LTR Pao 0 317 167 1 736 1116 15 0 7 chrUextra 19832636 19832772 -9171884 - 5S_DM RNA RNA 0 135 1 1 736 1167 7 0 0 chrUextra 19833020 19833155 -9171501 - 5S_DM RNA RNA 0 135 1 1 736 37 39 0 0 chrUextra 19833660 19833711 -9170945 + AT_rich Low_complexity Low_complexity 1 51 0 1 736 22 35 0 0 chrUextra 19833812 19833841 -9170815 + AT_rich Low_complexity Low_complexity 1 29 0 1 736 689 120 0 0 chrUextra 19834169 19834286 -9170370 - ARS406_DM Unknown Unknown -236 117 1 1 736 2813 179 12 8 chrUextra 19834193 19834848 -9169808 + SAR_DM Satellite Satellite 195 852 -620 1 736 2900 164 33 16 chrUextra 19834956 19835624 -9169032 - SAR_DM Satellite Satellite -425 1047 369 1 736 2873 19 3 16 chrUextra 19835731 19836101 -9168555 + BATUMI_I LTR Pao 6637 7001 -962 1 736 2456 7 0 0 chrUextra 19836127 19836412 -9168244 - BATUMI_I LTR Pao -1543 6420 6136 1 736 5733 9 6 6 chrUextra 19836512 19837193 -9167463 + MICROPIA_I LTR Gypsy 2964 3644 -832 1 736 5686 0 0 0 chrUextra 19838074 19838755 -9165901 - ROO_I LTR Pao -2951 5305 4625 1 736 1858 176 91 43 chrUextra 19838859 19839536 -9165120 + HETA LINE telomeric 4919 5394 -687 1 736 2831 170 16 26 chrUextra 19840417 19841098 -9163558 + SAR_DM Satellite Satellite 428 1101 -371 1 736 2863 175 24 12 chrUextra 19841198 19841879 -9162777 + SAR_DM Satellite Satellite 334 1022 -450 1 736 5413 4 9 3 chrUextra 19841979 19842660 -9161996 + QUASIMODO_I LTR Gypsy 4302 4986 -1074 1 736 201 74 0 0 chrUextra 19842789 19842816 -9161840 + (A)n Simple_repeat Simple_repeat 1 27 0 1 736 229 114 0 22 chrUextra 19842841 19842886 -9161770 + ROVER-I_DM LTR Gypsy 151 194 -6390 1 736 2295 4 0 0 chrUextra 19842923 19843190 -9161466 - MDG3_LTR LTR Gypsy 0 267 1 1 736 1193 0 0 0 chrUextra 19843190 19843330 -9161326 - MDG3_I LTR Gypsy 0 4986 4847 1 736 999 43 0 21 chrUextra 19843300 19843441 -9161215 - MDG3_I LTR Gypsy -2011 2975 2838 1 736 3032 105 60 33 chrUextra 19843545 19844222 -9160434 + STALKER4_I LTR Gypsy 415 1237 -5293 1 736 306 0 0 0 chrUextra 19844530 19844564 -9160092 + (CATA)n Simple_repeat Simple_repeat 3 36 0 1 736 186 43 0 0 chrUextra 19844697 19844720 -9159936 + (TATG)n Simple_repeat Simple_repeat 2 24 0 1 736 26 0 0 0 chrUextra 19844848 19844874 -9159782 + AT_rich Low_complexity Low_complexity 1 26 0 1 736 2676 233 13 4 chrUextra 19845104 19845784 -9158872 + TABOR_I LTR Gypsy 4057 4742 -1594 1 736 640 0 0 0 chrUextra 19845884 19845959 -9158697 - LSU-rRNA_Dme rRNA rRNA -3825 75 1 1 736 21 95 0 0 chrUextra 19845971 19846034 -9158622 + AT_rich Low_complexity Low_complexity 1 63 0 1 736 34 24 0 0 chrUextra 19846247 19846288 -9158368 + AT_rich Low_complexity Low_complexity 1 41 0 1 736 5349 0 1 38 chrUextra 19846665 19847346 -9157310 + LSU-rRNA_Dme rRNA rRNA 111 766 -3134 1 736 1546 31 0 15 chrUextra 19847446 19847643 -9157013 + PROTOP DNA P 4287 4480 0 1 736 26 30 0 0 chrUextra 19847995 19848028 -9156628 + AT_rich Low_complexity Low_complexity 1 33 0 1 736 23 68 0 0 chrUextra 19848074 19848118 -9156538 + AT_rich Low_complexity Low_complexity 1 44 0 1 736 3164 159 9 11 chrUextra 19849023 19849689 -9154967 + SAR_DM Satellite Satellite 369 1033 -439 1 736 3163 0 0 63 chrUextra 19849792 19850207 -9154449 - LSU-rRNA_Dme rRNA rRNA -3511 389 1 1 736 21 95 0 0 chrUextra 19850219 19850282 -9154374 + AT_rich Low_complexity Low_complexity 1 63 0 1 736 1167 7 0 0 chrUextra 19850741 19850876 -9153780 + 5S_DM RNA RNA 1 135 0 1 736 1068 16 0 8 chrUextra 19851121 19851251 -9153405 + 5S_DM RNA RNA 1 129 -6 1 736 5667 12 0 4 chrUextra 19851351 19852032 -9152624 - STALKER4_I LTR Gypsy -1591 4939 4262 1 736 2734 198 9 7 chrUextra 19852134 19852810 -9151846 + SAR_DM Satellite Satellite 282 958 -514 1 736 819 98 11 69 chrUextra 19852917 19853136 -9151520 - Gypsy12_I LTR Gypsy -4826 720 457 1 736 502 60 0 0 chrUextra 19853136 19853203 -9151453 - Gypsy12_I LTR Gypsy -4117 1429 1363 1 736 1385 115 5 58 chrUextra 19853205 19853594 -9151062 - Gypsy12_I LTR Gypsy -4751 795 370 1 736 5964 1 0 0 chrUextra 19853694 19854375 -9150281 + BS2 LINE Jockey 3560 4240 -481 1 736 2889 172 12 9 chrUextra 19854475 19855139 -9149517 + SAR_DM Satellite Satellite 411 1076 -396 1 736 2878 183 6 18 chrUextra 19855259 19855937 -9148719 - SAR_DM Satellite Satellite -361 1111 442 1 736 717 22 0 0 chrUextra 19856038 19856127 -9148529 - MAX_LTR LTR Pao -232 89 1 1 736 4027 45 0 0 chrUextra 19856133 19856665 -9147991 - MAX_I LTR Pao -2 7912 7381 1 736 2739 19 0 0 chrUextra 19856820 19857143 -9147513 - LSU-rRNA_Dme rRNA rRNA -1790 2110 1788 1 736 2518 6 16 3 chrUextra 19857187 19857499 -9147157 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1473 1 736 3287 0 0 0 chrUextra 19857599 19857980 -9146676 - ACCORD_LTR LTR Gypsy -177 381 1 1 736 2432 26 3 16 chrUextra 19857980 19858280 -9146376 - R1_DM LINE R1 -2231 3125 2830 1 736 5799 3 0 0 chrUextra 19858380 19859061 -9145595 + QUASIMODO_I LTR Gypsy 1975 2655 -3405 1 736 418 18 0 0 chrUextra 19859942 19859998 -9144658 + NTS_DM Other Other 78 133 -107 1 736 1239 24 0 6 chrUextra 19859998 19860163 -9144493 + NTS_DM Other Other 38 201 -39 1 736 870 9 0 27 chrUextra 19860215 19860327 -9144329 + NTS_DM Other Other 25 133 -107 1 736 1222 18 0 12 chrUextra 19860327 19860493 -9144163 + NTS_DM Other Other 38 201 -39 1 736 600 13 0 39 chrUextra 19860545 19860623 -9144033 + NTS_DM Other Other 25 99 -141 1 736 362 198 0 19 chrUextra 19860723 19860826 -9143830 + XDMR_DM Unknown Unknown 260 360 0 1 736 2706 175 18 23 chrUextra 19860739 19861404 -9143252 - SAR_DM Satellite Satellite -353 1119 458 1 736 5763 1 1 6 chrUextra 19861504 19862185 -9142471 - LSU-rRNA_Dme rRNA rRNA -2263 1637 960 1 736 772 19 18 28 chrUextra 19863066 19863175 -9141481 - NTS_DM Other Other -108 132 25 1 736 21 57 0 0 chrUextra 19863201 19863236 -9141420 + AT_rich Low_complexity Low_complexity 1 35 0 1 736 1252 18 0 6 chrUextra 19863236 19863401 -9141255 - NTS_DM Other Other -39 201 38 1 736 852 18 0 27 chrUextra 19863401 19863513 -9141143 - NTS_DM Other Other -107 133 25 1 736 1252 18 0 6 chrUextra 19863565 19863730 -9140926 - NTS_DM Other Other -39 201 38 1 736 5527 0 0 1 chrUextra 19863847 19864528 -9140128 - TIRANT_I LTR Gypsy -635 7057 6378 1 736 689 33 0 11 chrUextra 19864628 19864721 -9139935 + NTS_DM Other Other 42 133 -107 1 736 1252 18 0 6 chrUextra 19864721 19864886 -9139770 + NTS_DM Other Other 38 201 -39 1 736 870 9 0 27 chrUextra 19864938 19865050 -9139606 + NTS_DM Other Other 25 133 -107 1 736 1252 18 0 6 chrUextra 19865050 19865215 -9139441 + NTS_DM Other Other 38 201 -39 1 736 21 57 0 0 chrUextra 19865215 19865250 -9139406 + AT_rich Low_complexity Low_complexity 1 35 0 1 736 2684 0 0 3 chrUextra 19865409 19865721 -9138935 + LSU-rRNA_Dme rRNA rRNA 3590 3900 0 1 736 22 56 0 0 chrUextra 19865793 19865829 -9138827 + AT_rich Low_complexity Low_complexity 1 36 0 1 736 246 150 0 0 chrUextra 19865834 19865874 -9138782 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 736 246 150 0 0 chrUextra 19865926 19865966 -9138690 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 736 246 150 0 0 chrUextra 19866018 19866058 -9138598 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 736 5440 34 1 3 chrUextra 19866190 19866871 -9137785 - R1_DM LINE R1 -172 5184 4505 1 736 539 30 0 0 chrUextra 19866990 19867056 -9137600 + NINJA_I LTR Pao 4448 4513 -1498 1 736 4768 24 2 2 chrUextra 19867064 19867652 -9137004 + NINJA_I LTR Pao 4778 5365 -646 1 736 28 0 0 0 chrUextra 19868020 19868048 -9136608 + AT_rich Low_complexity Low_complexity 1 28 0 1 736 5532 28 1 1 chrUextra 19868533 19869214 -9135442 - R1_DM LINE R1 -353 5003 4323 1 736 1613 171 8 11 chrUextra 19869314 19869669 -9134987 - SAR_DM Satellite Satellite -487 985 632 1 736 2691 3 3 0 chrUextra 19869668 19869995 -9134661 - FW_DM LINE Jockey 0 4692 4365 1 736 5945 1 0 0 chrUextra 19870096 19870776 -9133880 + LSU-rRNA_Dme rRNA rRNA 2142 2821 -1079 1 736 5659 6 0 0 chrUextra 19870876 19871557 -9133099 + QUASIMODO_I LTR Gypsy 842 1522 -4538 1 736 2406 196 74 13 chrUextra 19871661 19872333 -9132323 - SAR_DM Satellite Satellite -224 1248 536 1 736 3111 164 9 9 chrUextra 19872449 19873118 -9131538 + SAR_DM Satellite Satellite 369 1037 -435 1 736 2088 124 6 28 chrUextra 19873221 19873872 -9130784 - DMSAT6 Satellite Satellite -61 637 1 1 736 3197 44 9 11 chrUextra 19874000 19874441 -9130215 - BATUMI_I LTR Pao -1097 6866 6427 1 736 1471 56 0 5 chrUextra 19874464 19874681 -9129975 + BATUMI_I LTR Pao 7303 7518 -445 1 736 22 56 0 0 chrUextra 19875221 19875257 -9129399 + AT_rich Low_complexity Low_complexity 1 36 0 1 736 5602 25 0 0 chrUextra 19875562 19876243 -9128413 + R1_DM LINE R1 2185 2865 -2491 1 736 1140 199 3 10 chrUextra 19876343 19876638 -9128018 - SAR_DM Satellite Satellite -684 788 496 1 736 1720 169 5 8 chrUextra 19876653 19877022 -9127634 - SAR_DM Satellite Satellite -569 903 536 1 736 3319 143 110 33 chrUextra 19877124 19877797 -9126859 + Gypsy3_I LTR Gypsy 4220 4944 -1233 1 736 5769 15 0 4 chrUextra 19877905 19878586 -9126070 - BATUMI_I LTR Pao -1939 6024 5347 1 736 488 119 36 0 chrUextra 19878894 19878978 -9125678 - NTS_DM Other Other -150 90 4 1 736 1290 6 0 18 chrUextra 19879088 19879253 -9125403 - NTS_DM Other Other -78 162 1 1 736 749 9 35 26 chrUextra 19879253 19879367 -9125289 - NTS_DM Other Other 0 240 126 1 736 6009 0 0 0 chrUextra 19879467 19880148 -9124508 - R2_DM LINE R2 -1185 2422 1742 1 736 4142 0 0 0 chrUextra 19880248 19880724 -9123932 - FW_DM LINE Jockey -3548 1144 669 1 736 1843 0 0 0 chrUextra 19880717 19880929 -9123727 + R1_DM LINE R1 5033 5244 -112 1 736 6016 0 0 0 chrUextra 19881029 19881710 -9122946 + R2_DM LINE R2 1818 2498 -1109 1 736 2270 0 11 0 chrUextra 19881810 19882081 -9122575 - R1_DM LINE R1 -5082 274 1 1 736 3550 0 0 2 chrUextra 19882081 19882491 -9122165 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2224 1 736 5917 1 0 0 chrUextra 19882591 19883272 -9121384 - TAHRE LINE telomeric -4919 5544 4864 1 736 5387 10 0 0 chrUextra 19884153 19884834 -9119822 - DM176_I LTR Gypsy -330 6090 5410 1 736 645 13 0 0 chrUextra 19884934 19885009 -9119647 - NTS_DM Other Other -165 75 1 1 736 1408 20 20 20 chrUextra 19885009 19885212 -9119444 - NTS_DM Other Other 0 240 38 1 736 817 0 0 0 chrUextra 19885212 19885308 -9119348 - NTS_DM Other Other -107 133 38 1 736 832 9 9 27 chrUextra 19885308 19885419 -9119237 - NTS_DM Other Other -107 133 25 1 736 21 57 0 0 chrUextra 19885445 19885480 -9119176 + AT_rich Low_complexity Low_complexity 1 35 0 1 736 932 30 0 7 chrUextra 19885480 19885615 -9119041 - NTS_DM Other Other -39 201 68 1 736 5800 1 3 1 chrUextra 19885715 19886396 -9118260 - R1_DM LINE R1 -3269 2087 1406 1 736 5808 1 1 1 chrUextra 19886496 19887177 -9117479 + R1_DM LINE R1 1380 2060 -3296 1 736 5731 7 0 0 chrUextra 19887283 19887958 -9116698 - DMRT1B LINE R1 -281 4902 4228 1 736 1101 0 8 0 chrUextra 19888058 19888191 -9116465 + ROO_I LTR Pao 8123 8256 0 1 736 3931 0 0 0 chrUextra 19888191 19888619 -9116037 + ROO_LTR LTR Pao 1 428 0 1 736 5835 6 15 10 chrUextra 19888839 19889520 -9115136 + FW_DM LINE Jockey 1733 2416 -2276 1 736 5734 19 13 7 chrUextra 19889620 19890300 -9114356 - FW_DM LINE Jockey -2126 2566 1883 1 736 293 50 0 0 chrUextra 19890423 19890483 -9114173 - PROTOP_B DNA P -522 631 572 1 736 3714 70 51 26 chrUextra 19890476 19891082 -9113574 - PROTOP_B DNA P -217 936 316 1 736 1337 111 111 0 chrUextra 19891182 19891398 -9113258 - MAX_LTR LTR Pao -81 240 1 1 736 3642 48 0 0 chrUextra 19891403 19891863 -9112793 - MAX_I LTR Pao -2 7912 7453 1 736 3774 19 8 27 chrUextra 19891963 19892437 -9112219 - ROO_I LTR Pao -7791 465 1 1 736 1721 48 0 0 chrUextra 19892437 19892644 -9112012 - ROO_LTR LTR Pao 0 428 222 1 736 1859 42 0 17 chrUextra 19892744 19892983 -9111673 + DM1731_LTR LTR Copia 101 335 -1 1 736 1620 9 2 5 chrUextra 19892983 19893425 -9111231 + (TTATA)n Simple_repeat Simple_repeat 1 440 0 1 736 3203 162 14 9 chrUextra 19893525 19894185 -9110471 - SAR_DM Satellite Satellite -484 988 326 1 736 5878 19 1 1 chrUextra 19894306 19894987 -9109669 - R1_DM LINE R1 -994 4362 3682 1 736 4046 43 74 14 chrUextra 19895868 19896433 -9108223 + QUASIMODO_I LTR Gypsy 4576 5174 -886 1 736 789 71 32 0 chrUextra 19896423 19896549 -9108107 + QUASIMODO_I LTR Gypsy 5467 5596 -464 1 736 580 35 0 11 chrUextra 19896649 19896737 -9107919 + NTS_DM Other Other 115 201 -39 1 736 907 9 0 27 chrUextra 19896789 19896901 -9107755 + NTS_DM Other Other 25 133 -107 1 736 1304 18 0 6 chrUextra 19896901 19897066 -9107590 + NTS_DM Other Other 38 201 -39 1 736 21 57 0 0 chrUextra 19897066 19897101 -9107555 + AT_rich Low_complexity Low_complexity 1 35 0 1 736 840 9 9 36 chrUextra 19897127 19897239 -9107417 + NTS_DM Other Other 25 133 -107 1 736 809 0 0 0 chrUextra 19897239 19897330 -9107326 + NTS_DM Other Other 38 128 -112 1 736 5794 24 24 0 chrUextra 19897430 19898111 -9106545 - R1_DM LINE R1 -1668 3688 2992 1 736 3680 63 45 0 chrUextra 19899132 19899673 -9104983 - PROTOP_A DNA P 0 1105 570 1 736 2744 269 3 3 chrUextra 19899773 19900454 -9104202 + Gypsy6_I LTR Gypsy 2325 3005 -4007 1 736 1203 0 24 18 chrUextra 19900554 19900718 -9103938 + NTS_DM Other Other 76 240 0 1 736 1926 4 17 13 chrUextra 19900718 19900957 -9103699 + NTS_DM Other Other 1 240 0 1 736 1355 6 0 18 chrUextra 19900957 19901122 -9103534 + NTS_DM Other Other 1 162 -78 1 736 5887 18 1 7 chrUextra 19901335 19902016 -9102640 + BATUMI_I LTR Pao 5624 6300 -1663 1 736 5799 28 0 0 chrUextra 19902116 19902797 -9101859 + R1_DM LINE R1 2569 3249 -2107 1 736 886 10 0 0 chrUextra 19902899 19903001 -9101655 + NTS_DM Other Other 32 133 -107 1 736 1304 18 0 6 chrUextra 19903001 19903166 -9101490 + NTS_DM Other Other 38 201 -39 1 736 889 18 0 27 chrUextra 19903218 19903330 -9101326 + NTS_DM Other Other 25 133 -107 1 736 1304 18 0 6 chrUextra 19903330 19903495 -9101161 + NTS_DM Other Other 38 201 -39 1 736 21 57 0 0 chrUextra 19903495 19903530 -9101126 + AT_rich Low_complexity Low_complexity 1 35 0 1 736 1610 29 0 99 chrUextra 19904730 19904963 -9099693 + DIVER2_I LTR Pao 1366 1575 -2572 1 736 1570 56 15 0 chrUextra 19904940 19905138 -9099518 + DIVER2_I LTR Pao 3719 3919 -228 1 736 1723 169 19 92 chrUextra 19905391 19905814 -9098842 - Gypsy3_LTR LTR Gypsy -6 392 1 1 736 972 0 0 0 chrUextra 19905814 19905921 -9098735 - Invader3_I LTR Gypsy -4096 792 686 1 736 1820 172 6 7 chrUextra 19906021 19906701 -9097955 - SAR_DM Satellite Satellite -602 678 1 1 736 1798 17 21 17 chrUextra 19906820 19907059 -9097597 - NTS_DM Other Other 0 240 1 1 736 1813 21 17 17 chrUextra 19907059 19907299 -9097357 - NTS_DM Other Other 0 240 1 1 736 1257 22 22 22 chrUextra 19907299 19907483 -9097173 - NTS_DM Other Other 0 240 57 1 736 1609 57 108 0 chrUextra 19907583 19908016 -9096640 - PROTOP_A DNA P -239 866 520 1 736 1841 49 0 0 chrUextra 19908003 19908229 -9096427 - PROTOP_A DNA P -806 299 74 1 736 5992 12 1 0 chrUextra 19908364 19909045 -9095611 - R1_DM LINE R1 -3070 2286 1605 1 736 6010 3 0 1 chrUextra 19909145 19909807 -9094849 - LSU-rRNA_Dme rRNA rRNA -662 3238 2578 1 736 6106 0 0 3 chrUextra 19909928 19910607 -9094049 + ROO_I LTR Pao 2183 2859 -5397 1 736 701 308 53 40 chrUextra 19910979 19911383 -9093273 - GTWIN_I LTR Gypsy -2812 3609 2969 1 736 678 125 0 0 chrUextra 19911488 19911600 -9093056 - ARS406_DM Unknown Unknown -241 112 1 1 736 3071 184 6 8 chrUextra 19911507 19912166 -9092490 + SAR_DM Satellite Satellite 195 852 -620 1 736 6204 3 0 0 chrUextra 19912269 19912950 -9091706 + LSU-rRNA_Dme rRNA rRNA 1943 2623 -1277 1 736 6037 1 1 1 chrUextra 19913050 19913731 -9090925 - R1_DM LINE R1 -3680 1676 996 1 736 5062 0 0 0 chrUextra 19913831 19914386 -9090270 + R1_DM LINE R1 4802 5356 0 1 736 1156 8 0 0 chrUextra 19914384 19914512 -9090144 + LSU-rRNA_Dme rRNA rRNA 2640 2767 -1133 1 736 4894 6 0 0 chrUextra 19914612 19915153 -9089503 - LSU-rRNA_Dme rRNA rRNA -1572 2328 1788 1 736 820 0 0 10 chrUextra 19915197 19915293 -9089363 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1694 1 736 3356 162 10 9 chrUextra 19915395 19916072 -9088584 - SAR_DM Satellite Satellite -416 1056 379 1 736 5746 0 21 0 chrUextra 19916179 19916855 -9087801 + ROO_I LTR Pao 397 1086 -7170 1 736 4258 4 0 0 chrUextra 19916955 19917428 -9087228 - QUASIMODO_LTR LTR Gypsy -62 596 124 1 736 305 274 43 43 chrUextra 19917491 19917632 -9087024 + MICROPIA_I LTR Gypsy 1972 2112 -2364 1 736 5886 28 0 0 chrUextra 19917736 19918417 -9086239 + R1_DM LINE R1 1941 2621 -2735 1 736 28 48 0 0 chrUextra 19918671 19918713 -9085943 + AT_rich Low_complexity Low_complexity 1 42 0 1 736 32 0 0 0 chrUextra 19919042 19919074 -9085582 + AT_rich Low_complexity Low_complexity 1 32 0 1 736 405 0 20 0 chrUextra 19919298 19919347 -9085309 + R1_DM LINE R1 4233 4282 -1074 1 736 5155 25 3 3 chrUextra 19919367 19919979 -9084677 + R1_DM LINE R1 4407 5018 -338 1 736 2757 0 0 3 chrUextra 19920860 19921172 -9083484 + HMSBEAGLE_I LTR Gypsy 6219 6529 0 1 736 2421 8 0 0 chrUextra 19921172 19921438 -9083218 + DMLTR5 LTR Gypsy 1 266 0 1 736 675 117 0 0 chrUextra 19921438 19921541 -9083115 + (TA)n Simple_repeat Simple_repeat 2 104 0 1 736 697 138 0 0 chrUextra 19921641 19921750 -9082906 - NTS_DM Other Other -131 109 1 1 736 230 189 18 36 chrUextra 19921822 19921877 -9082779 - NTS_DM Other Other -186 54 1 1 736 1131 128 0 5 chrUextra 19921967 19922164 -9082492 - NTS_DM Other Other -44 196 1 1 736 317 85 21 0 chrUextra 19922256 19922303 -9082353 - NTS_DM Other Other -192 48 1 1 736 25 0 0 0 chrUextra 19922632 19922657 -9081999 + AT_rich Low_complexity Low_complexity 1 25 0 1 737 591 0 0 0 chrUextra 19923038 19923103 -9081553 + IDEFIX_I LTR Gypsy 1 65 -5563 1 737 6146 1 1 0 chrUextra 19923203 19923883 -9080773 - LSU-rRNA_Dme rRNA rRNA -896 3004 2324 1 737 5915 1 0 0 chrUextra 19923984 19924665 -9079991 + ROO_I LTR Pao 2837 3517 -4739 1 737 2946 219 18 7 chrUextra 19924766 19925446 -9079210 - TABOR_I LTR Gypsy -1560 4776 4090 1 737 393 0 0 0 chrUextra 19925546 19925589 -9079067 + Jockey2 LINE Jockey 1778 1820 -1608 1 737 2352 53 285 5 chrUextra 19925597 19926093 -9078563 - PROTOP_B DNA P -297 856 176 1 737 372 256 21 35 chrUextra 19926085 19926227 -9078429 + QUASIMODO_I LTR Gypsy 5527 5666 -394 1 737 6109 0 0 3 chrUextra 19926327 19927008 -9077648 + FW_DM LINE Jockey 3207 3885 -807 1 737 3239 166 10 10 chrUextra 19927115 19927789 -9076867 + SAR_DM Satellite Satellite 332 1005 -467 1 737 3185 171 14 8 chrUextra 19927890 19928542 -9076114 - SAR_DM Satellite Satellite -571 901 246 1 737 383 118 15 0 chrUextra 19928502 19928570 -9076086 + ARS406_DM Unknown Unknown 1 69 -284 1 737 5716 31 4 0 chrUextra 19928670 19929351 -9075305 - R1_DM LINE R1 -248 5108 4425 1 737 5508 31 1 15 chrUextra 19929451 19930132 -9074524 - FW_DM LINE Jockey -2820 1872 1201 1 737 2065 0 0 0 chrUextra 19930232 19930457 -9074199 - LSU-rRNA_Dme rRNA rRNA -1888 2012 1788 1 737 3607 0 5 5 chrUextra 19930501 19930913 -9073743 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1377 1 737 2156 122 20 3 chrUextra 19931341 19931694 -9072962 + DMRT1C LINE R1 3743 4101 -1342 1 737 2788 178 21 22 chrUextra 19931805 19932471 -9072185 + SAR_DM Satellite Satellite 227 891 -581 1 737 3051 187 8 8 chrUextra 19932575 19933242 -9071414 + SAR_DM Satellite Satellite 410 1076 -396 1 737 1668 180 58 18 chrUextra 19933356 19934037 -9070619 + SAR_DM Satellite Satellite 1 708 -225 1 737 3126 177 10 12 chrUextra 19934138 19934813 -9069843 - SAR_DM Satellite Satellite -478 994 321 1 737 284 194 16 0 chrUextra 19934918 19934980 -9069676 + XDMR Unknown Unknown 299 361 0 1 737 2771 184 15 28 chrUextra 19934926 19935599 -9069057 - SAR_DM Satellite Satellite -353 1119 456 1 737 2388 172 99 24 chrUextra 19935699 19936379 -9068277 - TART LINE telomeric -4751 9726 9040 1 737 2402 104 33 16 chrUextra 19936489 19937157 -9067499 + DMSAT6 Satellite Satellite 1 678 -1 1 737 3276 181 6 6 chrUextra 19937261 19937940 -9066716 - SAR_DM Satellite Satellite -442 1030 352 1 737 2823 202 23 5 chrUextra 19938042 19938704 -9065952 + SAR_DM Satellite Satellite 403 1076 -396 1 737 3647 0 0 0 chrUextra 19938823 19939221 -9065435 + R2_DM LINE R2 3201 3598 -9 1 737 2558 11 3 0 chrUextra 19939217 19939504 -9065152 + LSU-rRNA_Dme rRNA rRNA 2578 2865 -1035 1 737 2401 173 6 10 chrUextra 19939618 19940115 -9064541 + SAR_DM Satellite Satellite 500 994 -478 1 737 1295 6 0 0 chrUextra 19940119 19940285 -9064371 - DOC LINE Jockey 0 4725 4560 1 737 2881 181 12 25 chrUextra 19940386 19941060 -9063596 + SAR_DM Satellite Satellite 456 1120 -352 1 737 6001 0 0 1 chrUextra 19941166 19941847 -9062809 - ROO_I LTR Pao -4836 3420 2741 1 737 2861 181 13 27 chrUextra 19941949 19942625 -9062031 + SAR_DM Satellite Satellite 452 1118 -354 1 737 1937 188 48 12 chrUextra 19942728 19943404 -9061252 - SAR_DM Satellite Satellite -444 700 1 1 737 5094 20 0 0 chrUextra 19943510 19944112 -9060544 + PROTOP_A DNA P 504 1105 0 1 737 598 51 0 0 chrUextra 19944112 19944190 -9060466 + PROTOP_A DNA P 420 497 -608 1 737 2886 181 18 7 chrUextra 19944292 19944971 -9059685 - SAR_DM Satellite Satellite -549 923 238 1 737 28 0 0 0 chrUextra 19945071 19945099 -9059557 + AT_rich Low_complexity Low_complexity 1 28 0 1 737 480 0 0 130 chrUextra 19945099 19945283 -9059373 + (TTA)n Simple_repeat Simple_repeat 2 161 0 1 737 4072 4 0 0 chrUextra 19945284 19945752 -9058904 + BS2 LINE Jockey 2292 2759 -1962 1 737 2935 185 10 7 chrUextra 19945852 19946533 -9058123 + SAR_DM Satellite Satellite 335 1017 -455 1 737 5622 26 1 0 chrUextra 19947414 19948095 -9056561 + R1_DM LINE R1 4121 4802 -554 1 737 2110 124 3 28 chrUextra 19948195 19948876 -9055780 - DMSAT6 Satellite Satellite -32 663 1 1 737 794 30 0 0 chrUextra 19948976 19949075 -9055581 + DMCR1A LINE CR1 2502 2600 -1870 1 737 3717 101 10 10 chrUextra 19949075 19949656 -9055000 + DMCR1A LINE CR1 2823 3403 -1067 1 737 2841 185 16 10 chrUextra 19949757 19950435 -9054221 + SAR_DM Satellite Satellite 380 1061 -411 1 737 849 81 3 18 chrUextra 19950556 19951219 -9053437 + RSP Satellite Satellite 1 653 0 1 737 811 88 0 0 chrUextra 19951319 19951444 -9053212 - ARS406_DM Unknown Unknown -228 125 1 1 737 3234 241 33 12 chrUextra 19951348 19952771 -9051885 + SAR_DM Satellite Satellite 1 1453 -208 1 737 2663 243 56 27 chrUextra 19952881 19954342 -9050314 + SAR_DM Satellite Satellite 1 1503 -227 1 737 885 0 0 18 chrUextra 19954443 19954557 -9050099 + BATUMI_I LTR Pao 7852 7963 0 1 737 1394 46 0 39 chrUextra 19954557 19954754 -9049902 + BATUMI_I LTR Pao 7002 7190 -773 1 737 2232 38 7 7 chrUextra 19954754 19955048 -9049608 - ZAM_LTR LTR Gypsy 0 472 179 1 737 591 68 11 0 chrUextra 19955036 19955124 -9049532 - ZAM_LTR LTR Gypsy -248 224 136 1 737 5953 0 1 0 chrUextra 19955224 19955905 -9048751 - LSU-rRNA_Dme rRNA rRNA -645 3255 2574 1 737 2847 174 19 15 chrUextra 19956005 19956674 -9047982 - SAR_DM Satellite Satellite -480 992 321 1 737 942 110 6 12 chrUextra 19956786 19956951 -9047705 + SAR_DM Satellite Satellite 740 903 -569 1 737 2296 179 4 6 chrUextra 19956966 19957466 -9047190 + SAR_DM Satellite Satellite 496 994 -478 1 737 2160 81 2 45 chrUextra 19957594 19958240 -9046416 - DMSAT6 Satellite Satellite -3 617 1 1 737 5833 9 7 0 chrUextra 19958348 19959029 -9045627 - Gypsy6_I LTR Gypsy -1412 5600 4915 1 737 5933 0 0 1 chrUextra 19959129 19959810 -9044846 + LSU-rRNA_Dme rRNA rRNA 2265 2944 -956 1 737 246 150 0 0 chrUextra 19959910 19959950 -9044706 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 737 22 56 0 0 chrUextra 19959955 19959991 -9044665 + AT_rich Low_complexity Low_complexity 1 36 0 1 737 27 29 0 0 chrUextra 19960055 19960089 -9044567 + AT_rich Low_complexity Low_complexity 1 34 0 1 737 3717 2 5 0 chrUextra 19960161 19960591 -9044065 - LSU-rRNA_Dme rRNA rRNA 0 3900 3469 1 737 4702 55 102 6 chrUextra 19960691 19961370 -9043286 + BATUMI_I LTR Pao 1201 1944 -6019 1 737 5814 7 0 1 chrUextra 19961472 19962153 -9042503 - R1_DM LINE R1 -462 4894 4215 1 737 285 282 107 89 chrUextra 19962606 19962886 -9041770 - Invader1_LTR LTR Gypsy -55 368 84 1 737 5292 19 18 0 chrUextra 19963034 19963715 -9040941 - Invader2_I LTR Gypsy -3876 716 24 1 737 2505 76 15 34 chrUextra 19963820 19964491 -9040165 - DMSAT6 Satellite Satellite -64 657 1 1 737 2956 179 13 6 chrUextra 19964599 19965272 -9039384 - SAR_DM Satellite Satellite -549 923 246 1 737 225 156 0 0 chrUextra 19965232 19965277 -9039379 + ARS406_DM Unknown Unknown 1 45 -308 1 737 693 12 0 0 chrUextra 19965377 19965460 -9039196 + DM176_LTR LTR Gypsy 425 507 0 1 737 3811 15 6 33 chrUextra 19965460 19966000 -9038656 + DM176_I LTR Gypsy 1 525 -5895 1 737 37 39 0 0 chrUextra 19966007 19966058 -9038598 + AT_rich Low_complexity Low_complexity 1 51 0 1 737 2852 181 16 13 chrUextra 19966158 19966834 -9037822 - SAR_DM Satellite Satellite -549 923 246 1 737 250 133 0 0 chrUextra 19966794 19966839 -9037817 + ARS406_DM Unknown Unknown 1 45 -308 1 737 1921 4 0 26 chrUextra 19966939 19967172 -9037484 - CIRCE LINE Composite -4242 2114 1888 1 737 503 302 42 42 chrUextra 19966952 19967239 -9037417 - Gypsy12_I LTR Gypsy -1425 4121 3835 1 737 2850 30 3 30 chrUextra 19967248 19967620 -9037036 - CIRCE LINE Composite -4474 1882 1521 1 737 502 269 72 9 chrUextra 19967784 19968005 -9036651 - MICROPIA_I LTR Gypsy -886 3590 3356 1 737 906 258 20 20 chrUextra 19968100 19968401 -9036255 + Gypsy4_I LTR Gypsy 2024 2324 -3964 1 737 744 182 0 12 chrUextra 19968502 19968674 -9035982 - SAR_DM Satellite Satellite -807 665 496 1 737 985 89 0 6 chrUextra 19968523 19968682 -9035974 + ARS406_DM Unknown Unknown 1 158 -195 1 737 2253 175 4 6 chrUextra 19968689 19969179 -9035477 - SAR_DM Satellite Satellite -569 903 415 1 737 5577 16 3 0 chrUextra 19969282 19969963 -9034693 + FW_DM LINE Jockey 2859 3541 -1151 1 737 3984 113 69 3 chrUextra 19970063 19970744 -9033912 + HMSBEAGLE_I LTR Gypsy 4297 5022 -1507 1 737 2999 173 10 9 chrUextra 19970850 19971520 -9033136 + SAR_DM Satellite Satellite 335 1005 -467 1 737 1455 30 20 10 chrUextra 19971624 19971826 -9032830 - BLASTOPIA_LTR LTR Gypsy -71 204 1 1 737 4098 2 2 0 chrUextra 19971826 19972304 -9032352 - BLASTOPIA_I LTR Gypsy 0 4481 4003 1 737 1527 152 3 7 chrUextra 19973188 19973480 -9031176 + SAR_DM Satellite Satellite 613 903 -569 1 737 1650 186 3 3 chrUextra 19973495 19973862 -9030794 + SAR_DM Satellite Satellite 496 862 -610 1 737 5086 0 0 0 chrUextra 19974052 19974644 -9030012 - FW_DM LINE Jockey 0 4692 4101 1 737 5622 7 0 1 chrUextra 19974744 19975424 -9029232 + STALKER4_I LTR Gypsy 4660 5338 -1192 1 737 1486 0 0 0 chrUextra 19975524 19975692 -9028964 + LSU-rRNA_Dme rRNA rRNA 2487 2654 -1246 1 737 4383 2 0 2 chrUextra 19975691 19976204 -9028452 + R1_DM LINE R1 3231 3742 -1614 1 737 2888 186 19 26 chrUextra 19976304 19976984 -9027672 - SAR_DM Satellite Satellite -494 675 1 1 737 4908 44 3 31 chrUextra 19977084 19977763 -9026893 - CIRCE LINE Composite -3603 2753 2094 1 737 2896 170 13 13 chrUextra 19977864 19978544 -9026112 + SAR_DM Satellite Satellite 376 1055 -417 1 737 1928 24 4 20 chrUextra 19978644 19978882 -9025774 + R1_DM LINE R1 2892 3125 -2231 1 737 3835 0 0 0 chrUextra 19978882 19979324 -9025332 + ACCORD_LTR LTR Gypsy 1 442 -116 1 737 5422 24 3 1 chrUextra 19979424 19980104 -9024552 - R1_DM LINE R1 -1285 4071 3391 1 737 2973 173 8 8 chrUextra 19980204 19980861 -9023795 + SAR_DM Satellite Satellite 420 1076 -396 1 737 5885 1 0 0 chrUextra 19980984 19981664 -9022992 + MAX_I LTR Pao 2816 3495 -4419 1 737 1087 0 15 0 chrUextra 19982546 19982678 -9021978 - R1_DM LINE R1 -5222 134 1 1 737 4758 2 0 0 chrUextra 19982678 19983224 -9021432 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2087 1 737 610 14 0 0 chrUextra 19983324 19983395 -9021261 - NTS_DM Other Other -169 71 1 1 737 1418 20 20 20 chrUextra 19983395 19983598 -9021058 - NTS_DM Other Other 0 240 38 1 737 870 9 0 27 chrUextra 19983598 19983710 -9020946 - NTS_DM Other Other -107 133 25 1 737 1252 18 0 6 chrUextra 19983762 19983927 -9020729 - NTS_DM Other Other -39 201 38 1 737 600 13 0 0 chrUextra 19983927 19984004 -9020652 - NTS_DM Other Other -107 133 57 1 737 5615 3 0 1 chrUextra 19984114 19984784 -9019872 + LSU-rRNA_Dme rRNA rRNA 218 886 -3014 1 737 5384 35 0 6 chrUextra 19984884 19985564 -9019092 - BATUMI_I LTR Pao -2872 5091 4416 1 737 899 87 10 19 chrUextra 19985664 19986342 -9018314 + RSP Satellite Satellite 1 672 0 1 737 4973 65 15 3 chrUextra 19986444 19987124 -9017532 - R1_DM LINE R1 -4529 827 140 1 737 5524 16 3 4 chrUextra 19987224 19987904 -9016752 - MICROPIA_I LTR Gypsy -190 4286 3608 1 737 945 34 0 0 chrUextra 19988004 19988121 -9016535 + CIRCE LINE Composite 6240 6356 0 1 737 4241 21 0 50 chrUextra 19988121 19988682 -9015974 + CIRCE LINE Composite 1 533 -5823 1 737 2899 183 9 6 chrUextra 19988784 19989461 -9015195 - SAR_DM Satellite Satellite -602 870 192 1 737 4627 68 3 3 chrUextra 19989613 19990243 -9014413 + R1_DM LINE R1 1 630 -4726 1 737 3593 162 13 9 chrUextra 19990344 19991024 -9013632 - Gypsy5_I LTR Gypsy -2265 4244 3562 1 737 5947 0 1 0 chrUextra 19991124 19991804 -9012852 + LSU-rRNA_Dme rRNA rRNA 2474 3154 -746 1 737 5389 16 144 1 chrUextra 19991904 19992584 -9012072 + R1_DM LINE R1 3557 4333 -1023 1 737 1724 136 64 46 chrUextra 19992689 19993069 -9011587 + TART LINE telomeric 4698 5051 -9426 1 737 2445 24 0 0 chrUextra 19993069 19993364 -9011292 + PROTOP_A DNA P 1 295 -810 1 737 4568 0 2 2 chrUextra 19993464 19993990 -9010666 + LSU-rRNA_Dme rRNA rRNA 3375 3900 0 1 737 22 56 0 0 chrUextra 19994062 19994098 -9010558 + AT_rich Low_complexity Low_complexity 1 36 0 1 737 246 150 0 0 chrUextra 19994103 19994143 -9010513 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 737 5440 15 62 1 chrUextra 19994244 19994924 -9009732 - R1_DM LINE R1 -1497 3859 3139 1 737 874 178 102 15 chrUextra 19995234 19995439 -9009217 + DMLTR5 LTR Gypsy 44 266 0 1 737 351 49 65 16 chrUextra 19995438 19995500 -9009156 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 1 737 262 106 0 21 chrUextra 19995522 19995570 -9009086 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 737 2459 175 9 7 chrUextra 19995805 19996345 -9008311 - SAR_DM Satellite Satellite -577 679 29 1 737 827 68 0 0 chrUextra 19996345 19996462 -9008194 + ARS406_DM Unknown Unknown 73 189 -164 1 737 2459 175 9 7 chrUextra 19996462 19996484 -9008172 - SAR_DM Satellite Satellite -577 28 1 1 737 5295 35 1 3 chrUextra 19996584 19997251 -9007405 - R1_DM LINE R1 -132 5224 4559 1 737 1429 263 25 62 chrUextra 19997371 19998044 -9006612 + Gypsy12_LTR LTR Gypsy 570 1217 -1119 1 737 3112 26 3 0 chrUextra 19998144 19998529 -9006127 - R1_DM LINE R1 -218 5138 4753 1 737 2195 54 0 0 chrUextra 19998530 19998824 -9005832 + R1_DM LINE R1 409 702 -4654 1 737 3838 37 7 25 chrUextra 19998924 19999480 -9005176 + MDG1_I LTR Gypsy 5751 6296 -300 1 737 586 54 0 105 chrUextra 19999480 19999604 -9005052 + MDG1_I LTR Gypsy 6475 6585 -11 1 737 2521 10 0 0 chrUextra 19999704 20000000 -9004656 + FW_DM LINE Jockey 3668 3963 -729 1 737 2924 26 36 13 chrUextra 20000000 20000384 -9004272 + FW_DM LINE Jockey 3964 4356 -336 1 737 5382 16 0 0 chrUextra 20000484 20001150 -9003506 - PROTOP_A DNA P -333 772 107 1 737 1386 6 6 0 chrUextra 20001264 20001436 -9003220 + IDEFIX_LTR LTR Gypsy 422 594 0 1 737 25 0 0 0 chrUextra 20001625 20001650 -9003006 + AT_rich Low_complexity Low_complexity 1 25 0 1 737 1698 21 21 17 chrUextra 20002060 20002299 -9002357 + NTS_DM Other Other 1 240 0 1 737 1850 4 17 13 chrUextra 20002299 20002538 -9002118 + NTS_DM Other Other 1 240 0 1 737 1563 0 0 0 chrUextra 20002538 20002724 -9001932 + NTS_DM Other Other 1 186 -54 1 737 3038 171 9 9 chrUextra 20002830 20003504 -9001152 + SAR_DM Satellite Satellite 332 1005 -467 1 737 5351 21 16 1 chrUextra 20003604 20004284 -9000372 - ACCORD2_I LTR Gypsy -3406 3806 3117 1 737 2289 89 24 43 chrUextra 20004384 20005062 -8999594 - DMSAT6 Satellite Satellite -253 664 1 1 737 4378 33 105 0 chrUextra 20005164 20005773 -8998883 - R1_DM LINE R1 -4226 1130 458 1 737 620 40 0 0 chrUextra 20005768 20005844 -8998812 - R1_DM LINE R1 -1107 4249 4174 1 737 826 8 32 24 chrUextra 20005944 20006067 -8998589 + NTS_DM Other Other 117 240 0 1 737 1831 8 17 13 chrUextra 20006067 20006306 -8998350 + NTS_DM Other Other 1 240 0 1 737 1290 6 0 18 chrUextra 20006306 20006471 -8998185 + NTS_DM Other Other 1 162 -78 1 737 293 70 0 0 chrUextra 20006581 20006624 -8998032 + NTS_DM Other Other 4 46 -194 1 737 2480 81 30 22 chrUextra 20006733 20007404 -8997252 - DMSAT6 Satellite Satellite -64 676 1 1 737 5453 32 6 1 chrUextra 20007504 20008184 -8996472 - CIRCE LINE Composite -2838 3518 2836 1 737 1256 13 0 6 chrUextra 20008284 20008442 -8996214 - NTS_DM Other Other -83 157 1 1 737 1723 25 17 17 chrUextra 20008442 20008682 -8995974 - NTS_DM Other Other 0 240 1 1 737 1756 17 17 17 chrUextra 20008682 20008922 -8995734 - NTS_DM Other Other 0 240 1 1 737 799 207 34 15 chrUextra 20009064 20009270 -8995386 + TOM_I LTR Gypsy 3815 4024 -2088 1 737 345 229 90 60 chrUextra 20009285 20009485 -8995171 - Gypsy_LTR LTR Gypsy -20 462 257 1 737 1798 62 4 0 chrUextra 20010282 20010524 -8994132 + Baggins1 LINE LOA 4791 5033 -420 1 737 1404 135 40 37 chrUextra 20010624 20010843 -8993813 + Jockey2 LINE Jockey 3097 3318 -110 1 737 1068 30 0 0 chrUextra 20010843 20010975 -8993681 + (TTA)n Simple_repeat Simple_repeat 3 134 0 1 737 1404 135 40 37 chrUextra 20010975 20011078 -8993578 + Jockey2 LINE Jockey 3319 3420 -8 1 737 723 111 275 0 chrUextra 20011107 20011278 -8993378 - DNAREP1_DM LINE Penelope -175 419 202 1 737 3063 175 6 7 chrUextra 20011404 20012079 -8992577 + SAR_DM Satellite Satellite 403 1076 -396 1 737 21 0 0 0 chrUextra 20012679 20012700 -8991956 + AT_rich Low_complexity Low_complexity 1 21 0 1 737 231 0 0 0 chrUextra 20012837 20012864 -8991792 + BATUMI_LTR LTR Pao 1 27 -245 1 737 1176 0 0 0 chrUextra 20013000 20013135 -8991521 + 5S_DM RNA RNA 1 135 0 1 737 1176 0 0 0 chrUextra 20013376 20013511 -8991145 + 5S_DM RNA RNA 1 135 0 1 737 5546 24 3 0 chrUextra 20014524 20015204 -8989452 - R1_DM LINE R1 -169 5187 4506 1 737 5790 0 0 1 chrUextra 20015304 20015984 -8988672 + DM176_I LTR Gypsy 4937 5615 -805 1 737 5455 32 0 0 chrUextra 20016087 20016764 -8987892 + R1_DM LINE R1 2509 3185 -2171 1 737 224 185 31 0 chrUextra 20016924 20016989 -8987667 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 737 22 35 0 0 chrUextra 20017276 20017305 -8987351 + AT_rich Low_complexity Low_complexity 1 29 0 1 737 58 15 0 0 chrUextra 20017479 20017544 -8987112 + AT_rich Low_complexity Low_complexity 1 65 0 1 737 2205 264 4 3 chrUextra 20017649 20018324 -8986332 - ROVER-I_DM LTR Gypsy -3005 3579 2904 1 737 5496 22 0 0 chrUextra 20018424 20019104 -8985552 + FW_DM LINE Jockey 2620 3299 -1393 1 737 1804 0 9 0 chrUextra 20019204 20019418 -8985238 - R1_DM LINE R1 -5140 216 1 1 737 455 36 0 0 chrUextra 20019418 20019473 -8985183 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2578 1 737 3635 0 0 0 chrUextra 20019469 20019884 -8984772 - R2_DM LINE R2 -3 3604 3190 1 737 3222 35 2 19 chrUextra 20019984 20020417 -8984239 - BATUMI_I LTR Pao -4915 3048 2623 1 737 1984 17 0 4 chrUextra 20020426 20020664 -8983992 - BATUMI_I LTR Pao -5509 2454 2218 1 737 5395 25 26 0 chrUextra 20020764 20021444 -8983212 + ROO_I LTR Pao 3847 4544 -3712 1 737 3712 81 52 27 chrUextra 20021548 20022224 -8982432 + STALKER4_I LTR Gypsy 824 1516 -5014 1 737 1427 69 0 0 chrUextra 20022324 20022512 -8982144 + Gypsy12_I LTR Gypsy 5359 5546 0 1 737 1996 194 12 41 chrUextra 20022511 20022994 -8981662 + Gypsy12_LTR LTR Gypsy 1 469 -1867 1 737 22 0 0 0 chrUextra 20023373 20023395 -8981261 + AT_rich Low_complexity Low_complexity 1 22 0 1 737 21 89 0 0 chrUextra 20024300 20024356 -8980300 + AT_rich Low_complexity Low_complexity 1 56 0 1 737 24 85 0 0 chrUextra 20024394 20024453 -8980203 + AT_rich Low_complexity Low_complexity 1 59 0 1 737 681 34 11 0 chrUextra 20024664 20024752 -8979904 - DMCR1A LINE CR1 -3300 1170 1082 1 737 5364 2 0 37 chrUextra 20025444 20026124 -8978532 - LSU-rRNA_Dme rRNA rRNA -3170 730 76 1 737 5660 26 0 0 chrUextra 20026224 20026904 -8977752 - DIVER_I LTR Pao -2986 2657 1978 1 737 246 150 0 0 chrUextra 20027019 20027059 -8977597 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 737 255 125 0 0 chrUextra 20027102 20027142 -8977514 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 737 22 56 0 0 chrUextra 20027155 20027191 -8977465 + AT_rich Low_complexity Low_complexity 1 36 0 1 737 870 9 0 27 chrUextra 20027217 20027329 -8977327 + NTS_DM Other Other 25 133 -107 1 737 1252 18 0 6 chrUextra 20027329 20027494 -8977162 + NTS_DM Other Other 38 201 -39 1 737 852 18 0 27 chrUextra 20027546 20027658 -8976998 + NTS_DM Other Other 25 133 -107 1 737 226 0 0 0 chrUextra 20027658 20027684 -8976972 + NTS_DM Other Other 38 63 -177 1 737 246 295 63 89 chrUextra 20028224 20028414 -8976242 - Invader1_LTR LTR Gypsy -55 368 184 1 737 4326 2 0 0 chrUextra 20028564 20029060 -8975596 - LSU-rRNA_Dme rRNA rRNA -1617 2283 1788 1 737 1059 0 14 14 chrUextra 20029104 20029244 -8975412 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1649 1 737 1808 181 4 13 chrUextra 20029347 20029783 -8974873 - STALKER4_I LTR Gypsy -6676 726 235 1 737 5535 9 0 0 chrUextra 20030124 20030804 -8973852 + DM297_I LTR Gypsy 1139 1818 -4349 1 737 590 117 10 0 chrUextra 20030904 20031007 -8973649 - ARS406_DM Unknown Unknown -249 104 1 1 737 2813 186 9 9 chrUextra 20030915 20031583 -8973073 + SAR_DM Satellite Satellite 195 862 -610 1 737 4073 4 0 0 chrUextra 20031684 20032155 -8972501 - ROO_I LTR Pao -709 7547 7077 1 737 1906 0 0 0 chrUextra 20032141 20032364 -8972292 - ROO_I LTR Pao -3752 4504 4282 1 737 3037 164 16 10 chrUextra 20032464 20033144 -8971512 + SAR_DM Satellite Satellite 333 1016 -456 1 737 5260 22 21 6 chrUextra 20033244 20033924 -8970732 + MDG3_I LTR Gypsy 2737 3426 -1560 1 737 2884 36 42 5 chrUextra 20034024 20034589 -8970067 - DOC2_DM LINE Jockey -4162 631 10 1 737 656 11 21 31 chrUextra 20034608 20034704 -8969952 - TAHRE LINE telomeric -9297 1166 1072 1 737 4177 8 0 0 chrUextra 20034804 20035294 -8969362 + FW_DM LINE Jockey 544 1033 -3659 1 737 1612 16 0 0 chrUextra 20035292 20035484 -8969172 + FW_DM LINE Jockey 1271 1462 -3230 1 737 1416 23 0 0 chrUextra 20035584 20035756 -8968900 + (TTA)n Simple_repeat Simple_repeat 3 174 0 1 737 1459 135 39 36 chrUextra 20035776 20036003 -8968653 + Jockey2 LINE Jockey 3089 3318 -110 1 737 1122 29 0 0 chrUextra 20036003 20036141 -8968515 + (TTA)n Simple_repeat Simple_repeat 3 140 0 1 737 1459 135 39 36 chrUextra 20036141 20036244 -8968412 + Jockey2 LINE Jockey 3319 3420 -8 1 737 5697 7 0 1 chrUextra 20036364 20037040 -8967616 - FW_DM LINE Jockey -3837 855 181 1 737 5271 28 54 1 chrUextra 20037144 20037824 -8966832 - DOC3_DM LINE Jockey -864 3876 3161 1 737 322 117 67 0 chrUextra 20037924 20037984 -8966672 + NTS_DM Other Other 27 90 -150 1 737 28 48 0 0 chrUextra 20038259 20038301 -8966355 + AT_rich Low_complexity Low_complexity 1 42 0 1 737 1157 23 28 22 chrUextra 20038706 20038887 -8965769 + NTS_DM Other Other 59 240 0 1 737 1850 4 17 13 chrUextra 20038887 20039126 -8965530 + NTS_DM Other Other 1 240 0 1 737 1824 0 21 13 chrUextra 20039126 20039364 -8965292 + NTS_DM Other Other 1 240 0 1 737 476 107 35 12 chrUextra 20039580 20039665 -8964991 - NTS_DM Other Other -150 90 4 1 737 1301 6 0 18 chrUextra 20039775 20039940 -8964716 - NTS_DM Other Other -78 162 1 1 737 1693 9 18 13 chrUextra 20039940 20040164 -8964492 - NTS_DM Other Other 0 240 16 1 737 3290 2 0 60 chrUextra 20040264 20040694 -8963962 - LSU-rRNA_Dme rRNA rRNA -3496 404 1 1 737 21 95 0 0 chrUextra 20040706 20040769 -8963887 + AT_rich Low_complexity Low_complexity 1 63 0 1 737 5544 24 0 7 chrUextra 20041044 20041724 -8962932 - BATUMI_I LTR Pao -1812 6151 5477 1 737 2625 187 41 21 chrUextra 20041827 20042504 -8962152 - SAR_DM Satellite Satellite -353 1119 429 1 737 5728 6 1 3 chrUextra 20043387 20044064 -8960592 - LSU-rRNA_Dme rRNA rRNA -2446 1454 779 1 737 2636 204 13 4 chrUextra 20045724 20046404 -8958252 + SAR_DM Satellite Satellite 248 933 -539 1 737 345 24 0 0 chrUextra 20046504 20046546 -8958110 + (TTCTC)n Simple_repeat Simple_repeat 4 45 0 1 737 1512 17 0 0 chrUextra 20046555 20046734 -8957922 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 737 5850 1 0 1 chrUextra 20047284 20047964 -8956692 + DMRT1A LINE R1 2238 2916 -2267 1 737 435 0 0 53 chrUextra 20048067 20048124 -8956532 - NTS_DM Other Other -162 78 25 1 737 22 56 0 0 chrUextra 20048150 20048186 -8956470 + AT_rich Low_complexity Low_complexity 1 36 0 1 737 255 125 0 0 chrUextra 20048199 20048239 -8956417 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 737 246 150 0 0 chrUextra 20048282 20048322 -8956334 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 737 246 150 0 0 chrUextra 20048374 20048414 -8956242 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 737 22 56 0 0 chrUextra 20048419 20048455 -8956201 + AT_rich Low_complexity Low_complexity 1 36 0 1 737 1862 0 0 5 chrUextra 20048527 20048744 -8955912 - LSU-rRNA_Dme rRNA rRNA 0 3900 3685 1 737 3507 36 150 15 chrUextra 20048844 20049524 -8955132 + BATUMI_I LTR Pao 2700 3471 -4492 1 737 5784 3 0 0 chrUextra 20049624 20050304 -8954352 - DM297_I LTR Gypsy -4952 1215 536 1 737 29 47 0 0 chrUextra 20050424 20050467 -8954189 + AT_rich Low_complexity Low_complexity 1 43 0 1 737 28 71 0 0 chrUextra 20050511 20050567 -8954089 + AT_rich Low_complexity Low_complexity 1 56 0 1 737 2607 53 74 3 chrUextra 20050706 20051084 -8953572 - PROTOP DNA P -3968 512 108 1 737 5727 1 1 0 chrUextra 20051184 20051864 -8952792 - LSU-rRNA_Dme rRNA rRNA -2858 1042 362 1 737 5833 4 0 0 chrUextra 20051964 20052644 -8952012 + R1_DM LINE R1 2076 2755 -2601 1 737 4199 38 0 0 chrUextra 20052744 20053274 -8951382 + STALKER4_I LTR Gypsy 4243 4772 -1758 1 737 868 62 0 27 chrUextra 20053273 20053422 -8951234 + DMSAT6 Satellite Satellite 246 390 -80 1 92 5528 16 1 1 chrUextra 20053524 20054204 -8950452 + STALKER4_I LTR Gypsy 2117 2796 -3734 1 738 5716 0 0 0 chrUextra 20054304 20054984 -8949672 + ROVER-I_DM LTR Gypsy 1766 2445 -4139 1 738 34 24 0 0 chrUextra 20055129 20055170 -8949486 + AT_rich Low_complexity Low_complexity 1 41 0 1 738 5685 0 1 0 chrUextra 20055864 20056544 -8948112 - ROO_I LTR Pao -134 8122 7442 1 738 1982 17 0 0 chrUextra 20057424 20057657 -8946999 + Invader1_LTR LTR Gypsy 191 423 0 1 738 3805 13 0 2 chrUextra 20057657 20058104 -8946552 + Invader1_I LTR Gypsy 1 446 -2740 1 738 237 31 0 0 chrUextra 20058984 20059016 -8945640 + Invader6_LTR LTR Gypsy 362 393 0 1 738 5542 14 0 0 chrUextra 20059016 20059664 -8944992 + Invader6_I LTR Gypsy 1 648 -3451 1 738 1525 33 14 9 chrUextra 20060544 20060756 -8943900 - CIRCE LINE Composite -1163 5193 4981 1 738 241 32 0 0 chrUextra 20061108 20061139 -8943517 - CIRCE LINE Composite -1376 4980 4950 1 738 645 47 0 0 chrUextra 20061139 20061224 -8943432 + R1_DM LINE R1 2864 2948 -2408 1 738 2692 0 6 3 chrUextra 20062104 20062425 -8942231 + LSU-rRNA_Dme rRNA rRNA 1467 1788 -2112 1 738 2742 0 0 3 chrUextra 20062469 20062784 -8941872 + LSU-rRNA_Dme rRNA rRNA 1788 2101 -1799 1 738 5511 25 1 1 chrUextra 20062884 20063564 -8941092 - R1_DM LINE R1 -1056 4300 3621 1 738 2148 16 0 0 chrUextra 20063664 20063920 -8940736 + Invader3_LTR LTR Gypsy 43 298 0 1 738 3639 2 0 0 chrUextra 20063920 20064344 -8940312 + Invader3_I LTR Gypsy 1 424 -4464 1 738 2560 189 12 21 chrUextra 20064448 20065122 -8939534 - SAR_DM Satellite Satellite -353 1119 452 1 738 5703 0 3 0 chrUextra 20065224 20065904 -8938752 - ROO_I LTR Pao -4534 3722 3041 1 738 5618 29 0 0 chrUextra 20066004 20066684 -8937972 + R1_DM LINE R1 4096 4775 -581 1 738 5645 21 0 0 chrUextra 20066787 20067464 -8937192 + MAX_I LTR Pao 2935 3611 -4303 1 738 2787 164 30 18 chrUextra 20067567 20068236 -8936420 + SAR_DM Satellite Satellite 282 958 -514 1 738 270 122 0 0 chrUextra 20068344 20068393 -8936263 - SAR_DM Satellite Satellite -881 591 543 1 738 2106 195 21 9 chrUextra 20068404 20068932 -8935724 - SAR_DM Satellite Satellite -396 1076 543 1 738 244 235 25 0 chrUextra 20068943 20069024 -8935632 - SAR_DM Satellite Satellite -396 1076 994 1 738 4756 0 0 44 chrUextra 20069124 20069733 -8934923 - LSU-rRNA_Dme rRNA rRNA -3318 582 1 1 738 5697 9 0 0 chrUextra 20069925 20070584 -8934072 + Invader1_I LTR Gypsy 1 659 -2527 1 738 5838 12 0 0 chrUextra 20070684 20071364 -8933292 + Copia2_I LTR Copia 1589 2268 -1894 1 738 1564 6 0 0 chrUextra 20072244 20072423 -8932233 + LSU-rRNA_Dme rRNA rRNA 2454 2632 -1268 1 738 4253 10 4 0 chrUextra 20072423 20072924 -8931732 + R1_DM LINE R1 1 503 -4853 1 738 2566 196 24 9 chrUextra 20073024 20073688 -8930968 + SAR_DM Satellite Satellite 446 1119 -353 1 738 248 227 45 0 chrUextra 20073638 20073704 -8930952 - XDMR_DM Unknown Unknown -31 329 261 1 738 920 61 3 18 chrUextra 20073846 20074484 -8930172 - RSP Satellite Satellite 0 628 1 1 738 229 216 0 0 chrUextra 20074717 20074768 -8929888 + A-rich Low_complexity Low_complexity 1 51 0 1 738 793 135 0 0 chrUextra 20075562 20075688 -8928968 - HMSBEAGLE_I LTR Gypsy 0 6529 6404 1 738 270 130 0 0 chrUextra 20075787 20075833 -8928823 - HMSBEAGLE_I LTR Gypsy -124 6405 6360 1 738 2908 181 10 10 chrUextra 20076144 20076824 -8927832 - SAR_DM Satellite Satellite -494 978 299 1 738 4014 0 8 4 chrUextra 20076924 20077406 -8927250 + LSU-rRNA_Dme rRNA rRNA 1305 1788 -2112 1 738 1353 0 0 0 chrUextra 20077450 20077604 -8927052 + LSU-rRNA_Dme rRNA rRNA 1788 1941 -1959 1 738 2199 4 4 4 chrUextra 20077704 20077978 -8926678 + Copia_LTR LTR Copia 3 276 0 1 738 3421 2 0 10 chrUextra 20077978 20078384 -8926272 + Copia_I LTR Copia 1 402 -4191 1 738 5841 1 0 1 chrUextra 20078484 20079164 -8925492 + R1_DM LINE R1 1464 2142 -3214 1 738 607 0 0 0 chrUextra 20079264 20079339 -8925317 + NTS_DM Other Other 57 131 -109 1 738 1391 25 20 20 chrUextra 20079341 20079544 -8925112 + NTS_DM Other Other 38 240 0 1 738 1734 21 17 17 chrUextra 20079544 20079784 -8924872 + NTS_DM Other Other 1 240 0 1 738 1332 6 0 0 chrUextra 20079784 20079944 -8924712 + NTS_DM Other Other 1 160 -80 1 738 4901 52 28 16 chrUextra 20080044 20080724 -8923932 - R1_DM LINE R1 -4529 827 140 1 738 34 24 0 0 chrUextra 20081322 20081363 -8923293 + AT_rich Low_complexity Low_complexity 1 41 0 1 738 3090 3 3 0 chrUextra 20081605 20081961 -8922695 - LSU-rRNA_Dme rRNA rRNA -1756 2144 1788 1 738 2303 0 7 4 chrUextra 20082005 20082284 -8922372 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1509 1 738 2283 106 6 62 chrUextra 20082407 20083064 -8921592 - DMSAT6 Satellite Satellite 0 620 1 1 738 1206 19 0 6 chrUextra 20083166 20083327 -8921329 + NTS_DM Other Other 42 201 -39 1 738 870 9 0 27 chrUextra 20083379 20083491 -8921165 + NTS_DM Other Other 25 133 -107 1 738 1252 18 0 6 chrUextra 20083491 20083656 -8921000 + NTS_DM Other Other 38 201 -39 1 738 853 18 0 27 chrUextra 20083708 20083820 -8920836 + NTS_DM Other Other 25 133 -107 1 738 5827 7 0 0 chrUextra 20083944 20084624 -8920032 + IDEFIX_I LTR Gypsy 1572 2251 -3377 1 738 1252 18 0 6 chrUextra 20084728 20084893 -8919763 + NTS_DM Other Other 38 201 -39 1 738 21 57 0 0 chrUextra 20084893 20084928 -8919728 + AT_rich Low_complexity Low_complexity 1 35 0 1 738 832 9 9 27 chrUextra 20084954 20085065 -8919591 + NTS_DM Other Other 25 133 -107 1 738 817 0 0 0 chrUextra 20085065 20085161 -8919495 + NTS_DM Other Other 38 133 -107 1 738 1408 20 20 20 chrUextra 20085161 20085364 -8919292 + NTS_DM Other Other 38 240 0 1 738 305 50 0 0 chrUextra 20085364 20085404 -8919252 + NTS_DM Other Other 1 40 -200 1 738 3078 168 13 7 chrUextra 20085507 20086180 -8918476 - SAR_DM Satellite Satellite -425 1047 371 1 738 2825 186 9 7 chrUextra 20086284 20086956 -8917700 + SAR_DM Satellite Satellite 231 903 -569 1 738 3029 163 14 9 chrUextra 20087064 20087732 -8916924 + SAR_DM Satellite Satellite 406 1076 -396 1 738 2800 68 7 17 chrUextra 20087936 20088341 -8916315 - Baggins1 LINE LOA -262 5191 4791 1 738 946 73 7 19 chrUextra 20088622 20089301 -8915355 + RSP Satellite Satellite 1 671 0 1 738 855 83 0 0 chrUextra 20089401 20089521 -8915135 + Gypsy12_I LTR Gypsy 1435 1554 -3992 1 738 2080 114 12 12 chrUextra 20089528 20089847 -8914809 + Gypsy12_I LTR Gypsy 1503 1821 -3725 1 738 1553 81 110 0 chrUextra 20089844 20090080 -8914576 + Gypsy12_I LTR Gypsy 4465 4726 -820 1 738 3025 168 32 7 chrUextra 20090180 20090859 -8913797 - SAR_DM Satellite Satellite -430 1042 347 1 738 5889 0 0 0 chrUextra 20090959 20091638 -8913018 - R1_DM LINE R1 -2420 2936 2258 1 738 261 29 0 0 chrUextra 20091738 20091772 -8912884 + R1_DM LINE R1 5323 5356 0 1 738 4606 54 3 3 chrUextra 20091805 20092417 -8912239 + R1_DM LINE R1 1 612 -4744 1 738 2837 188 9 7 chrUextra 20092520 20093196 -8911460 + SAR_DM Satellite Satellite 195 871 -601 1 738 5701 3 1 1 chrUextra 20093296 20093975 -8910681 - R1_DM LINE R1 -3958 1398 720 1 738 2378 28 9 9 chrUextra 20094075 20094396 -8910260 - BATUMI_I LTR Pao -1216 6747 6427 1 738 2628 24 0 3 chrUextra 20094419 20094754 -8909902 + BATUMI_I LTR Pao 7303 7636 -327 1 738 1820 4 17 17 chrUextra 20094869 20095109 -8909547 - NTS_DM Other Other 0 240 1 1 738 1734 21 17 17 chrUextra 20095109 20095349 -8909307 - NTS_DM Other Other 0 240 1 1 738 1236 17 22 22 chrUextra 20095349 20095533 -8909123 - NTS_DM Other Other 0 240 57 1 738 501 299 44 52 chrUextra 20095968 20096311 -8908345 + FROGGER_I LTR Copia 420 759 -1318 1 738 780 102 0 0 chrUextra 20096412 20096539 -8908117 - ARS406_DM Unknown Unknown -226 127 1 1 738 725 181 6 12 chrUextra 20096416 20096584 -8908072 + SAR_DM Satellite Satellite 523 689 -783 1 738 618 118 0 0 chrUextra 20096600 20096702 -8907954 - ARS406_DM Unknown Unknown -251 102 1 1 738 2157 166 10 8 chrUextra 20096611 20097090 -8907566 + SAR_DM Satellite Satellite 554 1033 -439 1 738 521 330 33 51 chrUextra 20097299 20097870 -8906786 + HMSBEAGLE_I LTR Gypsy 2650 3210 -3319 1 738 5912 1 1 0 chrUextra 20097973 20098649 -8906007 + SSU-rRNA_Dme rRNA rRNA 39 715 -1280 1 738 1731 0 0 0 chrUextra 20098755 20098961 -8905695 - NTS_DM Other Other -34 206 1 1 738 1861 0 17 13 chrUextra 20098961 20099200 -8905456 - NTS_DM Other Other 0 240 1 1 738 1042 21 0 7 chrUextra 20099282 20099428 -8905228 - NTS_DM Other Other -39 201 57 1 738 5597 13 1 0 chrUextra 20099528 20100207 -8904449 + PROTOP_A DNA P 380 1059 -46 1 738 3924 114 24 1 chrUextra 20100307 20100986 -8903670 - IDEFIX_I LTR Gypsy -109 5519 4826 1 738 5953 0 1 0 chrUextra 20101865 20102544 -8902112 - SSU-rRNA_Dme rRNA rRNA -1054 941 262 1 738 3284 191 43 0 chrUextra 20104202 20104881 -8899775 - IDEFIX_I LTR Gypsy -4359 1269 562 1 738 3873 8 0 66 chrUextra 20105097 20105612 -8899044 - T412LTR LTR LTR 0 481 1 1 738 1346 0 0 0 chrUextra 20105502 20105660 -8898996 - DM412 LTR Gypsy 0 6897 6740 1 738 3127 166 10 9 chrUextra 20105760 20106434 -8898222 - SAR_DM Satellite Satellite -466 1006 332 1 738 1171 19 0 6 chrUextra 20106539 20106699 -8897957 - PROTOP_A DNA P -324 781 623 1 738 3944 50 0 0 chrUextra 20106700 20107218 -8897438 + ZAM_I LTR Gypsy 6687 7204 -286 1 738 3448 22 0 0 chrUextra 20107318 20107735 -8896921 - DMRT1B LINE R1 -1049 4134 3718 1 738 2207 30 0 0 chrUextra 20107729 20107997 -8896659 - DMRT1B LINE R1 -1572 3611 3344 1 738 5566 13 22 3 chrUextra 20108097 20108776 -8895880 - SSU-rRNA_Dme rRNA rRNA -365 1630 939 1 738 1667 21 21 21 chrUextra 20108876 20109116 -8895540 - NTS_DM Other Other 0 240 1 1 738 1756 17 17 17 chrUextra 20109116 20109356 -8895300 - NTS_DM Other Other 0 240 1 1 738 1374 20 20 20 chrUextra 20109356 20109555 -8895101 - NTS_DM Other Other 0 240 42 1 738 5766 0 3 6 chrUextra 20109655 20110334 -8894322 - SSU-rRNA_Dme rRNA rRNA -222 1773 1097 1 738 2791 185 17 6 chrUextra 20110455 20111113 -8893543 + SAR_DM Satellite Satellite 321 985 -487 1 738 646 217 0 44 chrUextra 20111253 20111412 -8893244 + HETRP_DM Satellite Satellite 1518 1669 -203 1 738 715 186 8 24 chrUextra 20111529 20111704 -8892952 + HETRP_DM Satellite Satellite 1518 1682 -190 1 738 282 29 0 0 chrUextra 20111821 20111856 -8892800 + (GA)n Simple_repeat Simple_repeat 2 36 0 1 738 3498 166 9 8 chrUextra 20111992 20112660 -8891996 - SAR_DM Satellite Satellite -435 1037 369 1 738 3287 174 7 18 chrUextra 20112775 20113448 -8891208 - SAR_DM Satellite Satellite -382 1090 425 1 738 5821 25 4 1 chrUextra 20113550 20114229 -8890427 - R1_DM LINE R1 -2209 3147 2467 1 738 6162 3 0 0 chrUextra 20114329 20115008 -8889648 + R1_DM LINE R1 2488 3166 -2190 1 738 6022 16 0 0 chrUextra 20115108 20115787 -8888869 - R1_DM LINE R1 -2994 2362 1684 1 738 2763 80 19 1 chrUextra 20115887 20116566 -8888090 - DMSAT6 Satellite Satellite -28 690 1 1 738 6159 3 4 3 chrUextra 20116666 20117345 -8887311 + SSU-rRNA_Dme rRNA rRNA 801 1480 -515 1 738 5940 19 1 0 chrUextra 20117445 20118124 -8886532 - DMRT1B LINE R1 -1919 3264 2585 1 738 6172 0 0 1 chrUextra 20118224 20118903 -8885753 + DOC LINE Jockey 1186 1863 -2862 1 738 6016 3 0 7 chrUextra 20119003 20119682 -8884974 + R1_DM LINE R1 4605 5278 -78 1 738 6142 1 1 0 chrUextra 20119783 20120461 -8884195 + LSU-rRNA_Dme rRNA rRNA 221 899 -3001 1 738 3062 135 67 14 chrUextra 20120562 20121143 -8883513 - HETA LINE telomeric -617 5464 4865 1 738 2755 180 13 10 chrUextra 20121340 20121366 -8883290 + SAR_DM Satellite Satellite 1 29 -1221 1 738 615 67 56 0 chrUextra 20121366 20121455 -8883201 - ARS406_DM Unknown Unknown -164 189 96 1 738 2755 180 13 10 chrUextra 20121455 20122019 -8882637 + SAR_DM Satellite Satellite 30 681 -569 1 738 1528 165 23 7 chrUextra 20122121 20122426 -8882230 + SAR_DM Satellite Satellite 594 903 -569 1 738 1928 169 3 3 chrUextra 20122441 20122798 -8881858 + SAR_DM Satellite Satellite 496 852 -620 1 738 3852 14 5 1 chrUextra 20122898 20123340 -8881316 - DOC LINE Jockey -43 4682 3861 1 738 1228 100 282 5 chrUextra 20123677 20123886 -8880770 - DMCR1A LINE CR1 -984 3486 3220 1 738 3682 50 7 7 chrUextra 20123897 20124356 -8880300 - DMCR1A LINE CR1 -2598 1872 1414 1 738 6204 1 0 0 chrUextra 20124456 20125135 -8879521 + ROO_I LTR Pao 5477 6155 -2101 1 738 6201 3 1 3 chrUextra 20125235 20125914 -8878742 + LSU-rRNA_Dme rRNA rRNA 742 1419 -2481 1 738 3920 265 16 39 chrUextra 20126798 20128232 -8876424 - SAR_DM Satellite Satellite -255 1401 1 1 738 899 109 0 0 chrUextra 20128113 20128251 -8876405 + ARS406_DM Unknown Unknown 1 138 -215 1 738 6279 7 0 0 chrUextra 20128351 20129030 -8875626 - Copia2_I LTR Copia -1811 2351 1673 1 738 2629 116 24 16 chrUextra 20129132 20129623 -8875033 + MDG1_I LTR Gypsy 727 1221 -5375 1 738 1262 82 15 0 chrUextra 20129614 20129809 -8874847 + MDG1_I LTR Gypsy 1135 1332 -5264 1 738 6261 0 0 0 chrUextra 20129909 20130588 -8874068 - G_DM LINE Jockey -832 3514 2836 1 738 3197 181 9 13 chrUextra 20130689 20131367 -8873289 + SAR_DM Satellite Satellite 195 869 -603 1 738 4485 6 0 7 chrUextra 20131475 20132015 -8872641 - DM176_I LTR Gypsy -5884 536 1 1 738 1149 15 0 0 chrUextra 20132015 20132146 -8872510 - DM176_LTR LTR Gypsy 0 507 377 1 738 4130 149 48 0 chrUextra 20132253 20132925 -8871731 - Gypsy5_I LTR Gypsy -2711 3798 3095 1 738 4858 2 0 44 chrUextra 20133025 20133598 -8871058 - LSU-rRNA_Dme rRNA rRNA -3352 548 1 1 738 21 95 0 0 chrUextra 20133610 20133673 -8870983 + AT_rich Low_complexity Low_complexity 1 63 0 1 738 3150 172 12 9 chrUextra 20133804 20134451 -8870205 - SAR_DM Satellite Satellite -626 846 198 1 738 758 108 0 16 chrUextra 20134361 20134483 -8870173 + ARS406_DM Unknown Unknown 1 120 -233 1 738 2604 264 0 1 chrUextra 20134585 20135257 -8869399 - ROVER-I_DM LTR Gypsy -2531 4053 3383 1 738 5913 25 0 0 chrUextra 20135362 20136041 -8868615 + MAX_I LTR Pao 4760 5438 -2476 1 738 5583 30 4 13 chrUextra 20136141 20136820 -8867836 - BATUMI_I LTR Pao -5460 2503 1831 1 738 6204 6 0 0 chrUextra 20136920 20137599 -8867057 + R1_DM LINE R1 1858 2536 -2820 1 738 2960 56 1 21 chrUextra 20137699 20138098 -8866558 + STALKER4_LTR LTR Gypsy 43 399 -3 1 738 30 45 0 0 chrUextra 20138184 20138228 -8866428 + AT_rich Low_complexity Low_complexity 1 44 0 1 738 662 204 7 7 chrUextra 20138235 20138378 -8866278 + Stalker2_I LTR Gypsy 291 433 -6969 1 738 6126 6 0 0 chrUextra 20138480 20139157 -8865499 + DMRT1B LINE R1 4014 4690 -493 1 738 3604 195 4 0 chrUextra 20139258 20139936 -8864720 - ROVER-I_DM LTR Gypsy -2035 4549 3869 1 738 1299 0 0 0 chrUextra 20140036 20140180 -8864476 + ROO_I LTR Pao 8113 8256 0 1 738 3982 5 0 0 chrUextra 20140180 20140608 -8864048 + ROO_LTR LTR Pao 1 428 0 1 738 5773 37 1 0 chrUextra 20140815 20141494 -8863162 - R1_DM LINE R1 -3439 1917 1238 1 738 863 21 0 0 chrUextra 20141594 20141690 -8862966 + R1_DM LINE R1 5261 5356 0 1 738 4379 58 4 4 chrUextra 20141723 20142273 -8862383 + R1_DM LINE R1 1 550 -4806 1 738 5049 100 0 1 chrUextra 20142373 20143052 -8861604 - Gypsy12_I LTR Gypsy -1521 4025 3348 1 738 313 133 33 0 chrUextra 20143152 20143212 -8861444 - ARS406_DM Unknown Unknown -291 62 1 1 738 2980 197 14 5 chrUextra 20143172 20143824 -8860832 + SAR_DM Satellite Satellite 246 903 -569 1 738 5817 25 1 1 chrUextra 20143931 20144610 -8860046 + R1_DM LINE R1 3600 4278 -1078 1 738 880 28 9 0 chrUextra 20145500 20145606 -8859050 + NTS_DM Other Other 27 133 -107 1 738 876 0 0 0 chrUextra 20145606 20145702 -8858954 + NTS_DM Other Other 38 133 -107 1 738 1526 20 20 20 chrUextra 20145702 20145905 -8858751 + NTS_DM Other Other 38 240 0 1 738 1878 21 17 17 chrUextra 20145905 20146145 -8858511 + NTS_DM Other Other 1 240 0 1 738 4589 70 0 52 chrUextra 20146268 20146947 -8857709 + ROO_I LTR Pao 239 882 -7374 1 738 6297 1 0 1 chrUextra 20147047 20147726 -8856930 - LSU-rRNA_Dme rRNA rRNA -1414 2486 1809 1 738 5669 0 0 15 chrUextra 20147827 20148505 -8856151 + DM412 LTR Gypsy 982 1649 -5248 1 738 2178 133 40 12 chrUextra 20148606 20149284 -8855372 - DMSAT6 Satellite Satellite -86 697 1 1 738 4422 6 0 0 chrUextra 20149384 20149909 -8854747 + QUASIMODO_I LTR Gypsy 5536 6060 0 1 738 479 0 0 0 chrUextra 20149909 20149963 -8854693 + QUASIMODO_LTR LTR Gypsy 1 54 -604 1 738 904 0 0 0 chrUextra 20149964 20150063 -8854593 + DMRT1B LINE R1 713 811 -4372 1 738 456 0 0 0 chrUextra 20150163 20150214 -8854442 + MAX_I LTR Pao 7864 7914 0 1 738 2932 6 0 0 chrUextra 20150214 20150535 -8854121 + MAX_LTR LTR Pao 1 321 0 1 738 2769 3 0 0 chrUextra 20150535 20150842 -8853814 + BARI_DM DNA Tc1 1352 1658 -70 1 738 2960 181 9 24 chrUextra 20150942 20151609 -8853047 + SAR_DM Satellite Satellite 462 1118 -354 1 738 311 172 16 0 chrUextra 20151554 20151618 -8853038 - XDMR Unknown Unknown 0 361 297 1 738 1516 305 19 43 chrUextra 20151721 20152399 -8852257 - Gypsy6_I LTR Gypsy -4689 2323 1662 1 738 6194 1 1 3 chrUextra 20152503 20153179 -8851477 + SSU-rRNA_Dme rRNA rRNA 955 1629 -366 1 738 6150 6 0 0 chrUextra 20153279 20153958 -8850698 - DMRT1A LINE R1 -4348 835 157 1 738 5260 26 4 38 chrUextra 20154058 20154737 -8849919 + DOC2_DM LINE Jockey 756 1411 -3382 1 738 3401 170 12 12 chrUextra 20154837 20155516 -8849140 + SAR_DM Satellite Satellite 255 933 -539 1 738 5678 22 1 4 chrUextra 20155616 20156294 -8848362 - IDEFIX_I LTR Gypsy -2067 3561 2886 1 738 34 24 0 0 chrUextra 20156444 20156485 -8848171 + AT_rich Low_complexity Low_complexity 1 41 0 1 738 2447 265 15 3 chrUextra 20157175 20157853 -8846803 - TOM_I LTR Gypsy -1590 4522 3837 1 738 5793 32 1 4 chrUextra 20157953 20158632 -8846024 - R1_DM LINE R1 -641 4715 4039 1 738 399 21 0 0 chrUextra 20158732 20158779 -8845877 + STALKER4_I LTR Gypsy 6484 6530 0 1 738 3405 51 2 14 chrUextra 20158779 20159218 -8845438 + STALKER4_LTR LTR Gypsy 1 392 -10 1 738 1108 39 0 42 chrUextra 20159222 20159411 -8845245 - DMSAT6 Satellite Satellite -66 404 224 1 738 3445 273 13 10 chrUextra 20159511 20160347 -8844309 - SAR_DM Satellite Satellite -442 1030 192 1 738 852 76 0 0 chrUextra 20160290 20160409 -8844247 + ARS406_DM Unknown Unknown 40 158 -195 1 738 2770 175 18 7 chrUextra 20160406 20160969 -8843687 - SAR_DM Satellite Satellite -558 914 346 1 738 5879 12 115 0 chrUextra 20161069 20161748 -8842908 + DOC LINE Jockey 3794 4550 -175 1 738 6099 0 0 3 chrUextra 20161848 20162527 -8842129 + R1_DM LINE R1 2627 3303 -2053 1 738 2720 16 6 0 chrUextra 20162627 20162938 -8841718 + FW_DM LINE Jockey 1881 2193 -2499 1 738 2964 19 5 24 chrUextra 20162937 20163306 -8841350 + FW_DM LINE Jockey 2600 2961 -1731 1 738 6107 3 0 0 chrUextra 20163406 20164085 -8840571 + DM176_I LTR Gypsy 1468 2146 -4274 1 738 6245 6 0 0 chrUextra 20164188 20164864 -8839792 - Gypsy6_I LTR Gypsy -259 6753 6078 1 738 6113 1 4 4 chrUextra 20165743 20166422 -8838234 - LSU-rRNA_Dme rRNA rRNA -2162 1738 1060 1 738 5159 22 2 0 chrUextra 20166555 20167141 -8837515 + PROTOP DNA P 1 587 -3893 1 738 350 39 0 0 chrUextra 20167150 20167201 -8837455 + PROTOP DNA P 1662 1712 -2768 1 738 2744 176 8 9 chrUextra 20167317 20167947 -8836709 - SAR_DM Satellite Satellite -649 823 195 1 738 799 95 0 0 chrUextra 20167854 20167980 -8836676 + ARS406_DM Unknown Unknown 1 126 -227 1 738 5780 1 0 1 chrUextra 20168080 20168759 -8835897 - ROO_I LTR Pao -3703 4553 3876 1 738 860 234 191 42 chrUextra 20168859 20169538 -8835118 - Gypsy12_LTR LTR Gypsy -463 1873 1094 1 738 2842 188 9 11 chrUextra 20169639 20170317 -8834339 + SAR_DM Satellite Satellite 1 677 -396 1 738 2416 190 54 16 chrUextra 20170418 20171096 -8833560 + SAR_DM Satellite Satellite 1 704 -208 1 738 5339 9 9 1 chrUextra 20171196 20171875 -8832781 + QUASIMODO_I LTR Gypsy 4348 5031 -1029 1 738 2332 98 21 22 chrUextra 20171975 20172654 -8832002 - DMSAT6 Satellite Satellite -3 677 1 1 738 935 27 26 26 chrUextra 20172754 20172906 -8831750 + NTS_DM Other Other 89 240 0 1 738 1828 8 17 13 chrUextra 20172906 20173145 -8831511 + NTS_DM Other Other 1 240 0 1 738 1734 21 17 17 chrUextra 20173145 20173385 -8831271 + NTS_DM Other Other 1 240 0 1 738 375 42 0 0 chrUextra 20173385 20173433 -8831223 + NTS_DM Other Other 1 48 -192 1 738 3740 11 2 0 chrUextra 20173535 20174009 -8830647 - Invader2_I LTR Gypsy -4117 475 1 1 738 1591 30 10 5 chrUextra 20174009 20174212 -8830444 - Invader2_LTR LTR Gypsy 0 266 63 1 738 970 288 47 44 chrUextra 20174344 20174986 -8829670 - BLOOD_I LTR Gypsy -4148 2465 1822 1 738 4970 21 2 0 chrUextra 20175091 20175709 -8828947 + STALKER4_I LTR Gypsy 4582 5200 -1330 1 738 495 62 0 0 chrUextra 20175705 20175770 -8828886 + STALKER4_I LTR Gypsy 5721 5785 -745 1 738 1763 10 0 0 chrUextra 20175870 20176074 -8828582 + Invader2_LTR LTR Gypsy 63 266 0 1 738 2893 24 0 0 chrUextra 20176074 20176449 -8828207 + Invader2_I LTR Gypsy 1 375 -4217 1 738 793 10 10 0 chrUextra 20176447 20176549 -8828107 + Invader2_I LTR Gypsy 623 725 -3867 1 738 5659 1 0 0 chrUextra 20176649 20177328 -8827328 + ROO_I LTR Pao 4636 5314 -2942 1 738 5339 41 1 1 chrUextra 20177428 20178107 -8826549 + R1_DM LINE R1 932 1610 -3746 1 738 5744 10 0 0 chrUextra 20178986 20179665 -8824991 + FW_DM LINE Jockey 610 1288 -3404 1 738 2448 0 0 0 chrUextra 20179765 20180051 -8824605 - ROO_I LTR Pao -4921 3335 3050 1 738 279 79 0 0 chrUextra 20180382 20180420 -8824236 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 738 621 0 0 71 chrUextra 20180544 20180628 -8824028 - CIRCE LINE Composite -4391 1965 1888 1 738 359 277 28 28 chrUextra 20180550 20180695 -8823961 - Gypsy12_I LTR Gypsy -1567 3979 3835 1 738 4016 24 0 31 chrUextra 20180704 20181223 -8823433 - CIRCE LINE Composite -4474 1882 1380 1 738 4258 77 4 6 chrUextra 20181323 20182002 -8822654 - Gypsy2_I LTR Gypsy -4074 2938 1713 1 738 3742 153 24 9 chrUextra 20182102 20182781 -8821875 - Gypsy5_I LTR Gypsy -3471 3038 2350 1 738 2850 171 18 11 chrUextra 20182882 20183546 -8821110 - SAR_DM Satellite Satellite -478 994 326 1 738 3228 20 0 0 chrUextra 20183660 20184101 -8820555 + QUASIMODO_I LTR Gypsy 5576 6016 -44 1 738 928 57 0 8 chrUextra 20184101 20184224 -8820432 - NINJA_LTR LTR Pao -1 316 195 1 738 701 25 521 0 chrUextra 20184222 20184339 -8820317 - NINJA_I LTR Pao -460 5551 5374 1 738 1957 186 5 7 chrUextra 20184445 20184888 -8819768 - SAR_DM Satellite Satellite -535 937 496 1 92 962 166 9 9 chrUextra 20184903 20185116 -8819540 - SAR_DM Satellite Satellite -928 544 332 1 739 5559 22 1 1 chrUextra 20185218 20185897 -8818759 - HETA LINE telomeric -3900 2181 1503 1 739 966 169 189 4 chrUextra 20185997 20186283 -8818373 + HMSBEAGLE_I LTR Gypsy 5481 5819 -710 1 739 1804 92 20 0 chrUextra 20186776 20187066 -8817590 - G5_DM LINE Jockey -416 4440 3972 1 739 586 212 0 0 chrUextra 20187555 20187692 -8816964 - ARS406_DM Unknown Unknown -216 137 1 1 739 2427 183 24 25 chrUextra 20187595 20188233 -8816423 + SAR_DM Satellite Satellite 191 827 -645 1 739 2424 71 16 21 chrUextra 20188334 20189013 -8815643 - DMSAT6 Satellite Satellite -72 676 1 1 739 1440 23 0 0 chrUextra 20189471 20189643 -8815013 + (TATTG)n Simple_repeat Simple_repeat 5 176 0 1 739 1113 14 7 14 chrUextra 20189647 20189792 -8814864 + (TTATA)n Simple_repeat Simple_repeat 4 147 0 1 739 5543 21 15 0 chrUextra 20190672 20191350 -8813306 - ACCORD2_I LTR Gypsy -6190 1022 335 1 739 2554 193 38 7 chrUextra 20191452 20192129 -8812527 - SAR_DM Satellite Satellite -519 953 256 1 739 5642 12 0 0 chrUextra 20192229 20192908 -8811748 + STALKER4_I LTR Gypsy 2105 2783 -3747 1 739 1770 272 15 23 chrUextra 20193022 20193635 -8811021 + Invader4_I LTR Gypsy 265 872 -1541 1 739 2354 202 36 6 chrUextra 20193787 20194428 -8810228 - SAR_DM Satellite Satellite -622 850 191 1 739 597 143 25 8 chrUextra 20194342 20194462 -8810194 + ARS406_DM Unknown Unknown 10 131 -222 1 739 5855 0 3 3 chrUextra 20194566 20195245 -8809411 + LSU-rRNA_Dme rRNA rRNA 3195 3873 -27 1 739 1826 71 4 0 chrUextra 20195769 20196024 -8808632 + Baggins1 LINE LOA 4791 5046 -407 1 739 5384 25 40 1 chrUextra 20196124 20196803 -8807853 - R1_DM LINE R1 -1618 3738 3034 1 739 5923 0 1 1 chrUextra 20196903 20197582 -8807074 + LSU-rRNA_Dme rRNA rRNA 2859 3537 -363 1 739 5800 9 3 0 chrUextra 20197682 20198361 -8806295 + MICROPIA_I LTR Gypsy 140 820 -3656 1 739 1239 24 0 6 chrUextra 20198506 20198671 -8805985 - NTS_DM Other Other -39 201 38 1 739 843 18 0 27 chrUextra 20198671 20198783 -8805873 - NTS_DM Other Other -107 133 25 1 739 1636 5 0 5 chrUextra 20198835 20199037 -8805619 - NTS_DM Other Other -39 201 1 1 739 638 10 39 39 chrUextra 20199037 20199140 -8805516 - NTS_DM Other Other 0 240 138 1 739 516 216 230 0 chrUextra 20199457 20199613 -8805043 - TIRANT_I LTR Gypsy -3752 3940 3777 1 739 21 82 0 0 chrUextra 20199765 20199814 -8804842 + AT_rich Low_complexity Low_complexity 1 49 0 1 739 407 70 0 0 chrUextra 20200019 20200076 -8804580 + ARS406_DM Unknown Unknown 133 189 -164 1 739 2794 179 12 12 chrUextra 20200029 20200697 -8803959 - SAR_DM Satellite Satellite -610 862 195 1 739 5716 1 0 1 chrUextra 20200818 20201477 -8803179 + LSU-rRNA_Dme rRNA rRNA 1788 2445 -1455 1 739 5285 40 12 6 chrUextra 20202356 20203035 -8801621 - CIRCE LINE Composite -2888 3468 2786 1 739 1759 5 0 5 chrUextra 20203135 20203344 -8801312 + ROVER-LTR_DM LTR Gypsy 160 367 0 1 739 3756 2 0 4 chrUextra 20203344 20203814 -8800842 + ROVER-I_DM LTR Gypsy 1 468 -6116 1 739 1543 241 52 47 chrUextra 20203915 20204593 -8800063 - SAR_DM Satellite Satellite -625 681 1 1 739 5787 3 0 0 chrUextra 20204693 20205372 -8799284 + IDEFIX_I LTR Gypsy 1759 2437 -3191 1 739 2742 174 17 11 chrUextra 20206251 20206902 -8797754 + SAR_DM Satellite Satellite 422 1076 -396 1 739 279 100 16 48 chrUextra 20206867 20206930 -8797726 - XDMR_DM Unknown Unknown 0 360 300 1 739 3034 174 15 6 chrUextra 20207035 20207706 -8796950 + SAR_DM Satellite Satellite 247 923 -549 1 739 2987 170 8 9 chrUextra 20207810 20208463 -8796193 + SAR_DM Satellite Satellite 425 1076 -396 1 739 2474 92 21 28 chrUextra 20208586 20209264 -8795392 - DMSAT6 Satellite Satellite -3 672 1 1 739 2340 31 3 3 chrUextra 20209419 20209711 -8794945 - PROTOP DNA P 0 4480 4189 1 739 1620 0 0 4 chrUextra 20210142 20210374 -8794282 + (TTCTC)n Simple_repeat Simple_repeat 1 230 0 1 739 743 144 34 6 chrUextra 20210374 20210401 -8794255 + polypyrimidine Low_complexity Low_complexity 154 180 0 1 739 984 91 28 11 chrUextra 20210401 20210578 -8794078 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 739 743 145 42 3 chrUextra 20210578 20210820 -8793836 + CT-rich Low_complexity Low_complexity 1 251 0 1 739 5275 38 0 0 chrUextra 20210920 20211598 -8793058 + HETA LINE telomeric 2576 3253 -2828 1 739 1657 18 18 18 chrUextra 20211698 20211927 -8792729 - NTS_DM Other Other -11 229 1 1 739 1408 20 20 20 chrUextra 20211927 20212130 -8792526 - NTS_DM Other Other 0 240 38 1 739 817 0 0 0 chrUextra 20212130 20212226 -8792430 - NTS_DM Other Other -107 133 38 1 739 808 19 9 27 chrUextra 20212226 20212337 -8792319 - NTS_DM Other Other -107 133 25 1 739 352 98 0 88 chrUextra 20212504 20213094 -8791562 + CT-rich Low_complexity Low_complexity 1 538 0 1 739 3014 171 15 7 chrUextra 20214032 20214708 -8789948 - SAR_DM Satellite Satellite -587 885 205 1 739 5866 4 0 0 chrUextra 20214810 20215488 -8789168 + R1_DM LINE R1 1967 2644 -2712 1 739 2692 184 25 21 chrUextra 20215588 20216264 -8788392 + SAR_DM Satellite Satellite 383 1061 -411 1 739 5530 21 0 0 chrUextra 20217144 20217822 -8786834 - BLOOD_I LTR Gypsy -4040 2573 1896 1 739 5529 34 0 0 chrUextra 20218700 20219377 -8785279 - R1_DM LINE R1 -3278 2078 1402 1 739 2657 173 19 17 chrUextra 20219478 20220155 -8784501 + SAR_DM Satellite Satellite 1 678 -411 1 739 4127 90 72 3 chrUextra 20220256 20220933 -8783723 + Stalker2_I LTR Gypsy 3365 4088 -3314 1 739 1063 264 55 49 chrUextra 20221034 20221711 -8782945 + SAR_DM Satellite Satellite 336 1016 -456 1 739 3048 179 16 19 chrUextra 20221813 20222490 -8782166 - SAR_DM Satellite Satellite -500 972 298 1 739 6186 0 4 3 chrUextra 20222590 20223268 -8781388 + SSU-rRNA_Dme rRNA rRNA 1130 1808 -187 1 739 3338 57 34 0 chrUextra 20223368 20223805 -8780851 + DOC3_DM LINE Jockey 998 1449 -3291 1 739 1080 284 2 8 chrUextra 20224148 20224542 -8780114 - TOM_I LTR Gypsy -1530 4582 4191 1 739 2450 7 0 0 chrUextra 20224542 20224824 -8779832 - STALKER4_I LTR Gypsy -424 6106 5825 1 739 4059 80 69 24 chrUextra 20224924 20225602 -8779054 + STALKER4_I LTR Gypsy 685 1393 -5137 1 739 2934 180 14 30 chrUextra 20225703 20226372 -8778284 + SAR_DM Satellite Satellite 462 1119 -353 1 739 6173 0 1 3 chrUextra 20226488 20227158 -8777498 + SSU-rRNA_Dme rRNA rRNA 694 1362 -633 1 739 2486 193 62 20 chrUextra 20227265 20227935 -8776721 - SAR_DM Satellite Satellite -720 698 1 1 739 4949 16 211 4 chrUextra 20228036 20228714 -8775942 - ROO_I LTR Pao -7336 920 103 1 739 3213 168 32 15 chrUextra 20228814 20229492 -8775164 + SAR_DM Satellite Satellite 346 1035 -437 1 739 5945 10 0 1 chrUextra 20229592 20230270 -8774386 + R1_DM LINE R1 230 906 -4450 1 739 4591 43 0 0 chrUextra 20230370 20230922 -8773734 - FW_DM LINE Jockey -4138 554 3 1 739 494 209 34 0 chrUextra 20230905 20231042 -8773614 + BURDOCK_I LTR Gypsy 4146 4246 -1614 1 739 6081 9 0 0 chrUextra 20231148 20231826 -8772830 - DMRT1B LINE R1 -2487 2696 2019 1 739 3160 184 15 10 chrUextra 20231926 20232603 -8772053 - SAR_DM Satellite Satellite -515 957 278 1 739 6151 3 0 0 chrUextra 20232704 20233382 -8771274 - R1_DM LINE R1 -1900 3456 2779 1 739 6290 1 0 0 chrUextra 20233482 20234160 -8770496 - Gypsy6_I LTR Gypsy -5393 1619 942 1 739 6230 4 0 0 chrUextra 20234260 20234938 -8769718 + DOC LINE Jockey 3128 3805 -920 1 739 5945 6 1 6 chrUextra 20235816 20236494 -8768162 + R1_DM LINE R1 3307 3981 -1375 1 739 5586 35 10 3 chrUextra 20236594 20237272 -8767384 - R1_DM LINE R1 -2042 3314 2632 1 739 5109 58 68 0 chrUextra 20237372 20238050 -8766606 - DM297_I LTR Gypsy -2629 3538 2815 1 739 380 214 87 10 chrUextra 20238203 20238307 -8766349 + DNAREP1_DM LINE Penelope 67 178 -416 1 739 1061 136 105 71 chrUextra 20238542 20238780 -8765876 + ROVER-LTR_DM LTR Gypsy 1 246 -121 1 739 5960 22 0 0 chrUextra 20238928 20239606 -8765050 - R1_DM LINE R1 -3195 2161 1484 1 739 3400 262 35 29 chrUextra 20242040 20243491 -8761165 - SAR_DM Satellite Satellite -399 1459 1 1 739 6045 1 0 0 chrUextra 20243596 20244274 -8760382 - ROO_I LTR Pao -2954 5302 4625 1 739 2491 99 8 54 chrUextra 20244378 20245048 -8759608 - DMSAT6 Satellite Satellite -127 639 1 1 739 6171 6 0 0 chrUextra 20245930 20246608 -8758048 + IVK_DM LINE I 2208 2885 -2517 1 739 1671 188 15 20 chrUextra 20246710 20247052 -8757604 - Gypsy12_LTR LTR Gypsy -1996 340 1 1 739 2670 75 0 3 chrUextra 20247051 20247386 -8757270 - Gypsy12_I LTR Gypsy 0 5546 5213 1 739 5991 1 0 4 chrUextra 20247486 20248164 -8756492 + ROO_I LTR Pao 2905 3579 -4677 1 739 5597 41 3 0 chrUextra 20249042 20249720 -8754936 + G2_DM LINE Jockey 1521 2200 -902 1 739 6217 6 1 0 chrUextra 20249820 20250498 -8754158 - DOC LINE Jockey -872 3853 3175 1 739 3237 165 9 32 chrUextra 20250599 20251275 -8753381 - SAR_DM Satellite Satellite -406 1066 407 1 739 5846 12 27 0 chrUextra 20251379 20252054 -8752602 + STALKER4_I LTR Gypsy 2179 2871 -3659 1 739 2531 3 0 7 chrUextra 20252154 20252442 -8752214 + BATUMI_I LTR Pao 7678 7963 0 1 739 2337 24 3 27 chrUextra 20252442 20252734 -8751922 + BATUMI_I LTR Pao 7002 7286 -677 1 739 844 28 0 0 chrUextra 20252724 20252832 -8751824 + G_DM LINE Jockey 638 745 -3601 1 739 6099 3 0 7 chrUextra 20252932 20253610 -8751046 + G2_DM LINE Jockey 1203 1875 -1227 1 739 6209 1 0 0 chrUextra 20253710 20254388 -8750268 + DOC LINE Jockey 769 1446 -3279 1 739 6312 1 0 0 chrUextra 20254488 20255166 -8749490 - Invader1_I LTR Gypsy -262 2924 2247 1 739 6107 1 0 1 chrUextra 20255285 20255944 -8748712 + LSU-rRNA_Dme rRNA rRNA 1788 2445 -1455 1 739 6215 3 0 0 chrUextra 20256045 20256722 -8747934 - Copia2_I LTR Copia -3438 724 48 1 739 928 47 0 16 chrUextra 20256822 20256951 -8747705 - NTS_DM Other Other -76 164 38 1 739 876 0 0 0 chrUextra 20256951 20257047 -8747609 - NTS_DM Other Other -107 133 38 1 739 898 9 9 27 chrUextra 20257047 20257158 -8747498 - NTS_DM Other Other -107 133 25 1 739 21 57 0 0 chrUextra 20257184 20257219 -8747437 + AT_rich Low_complexity Low_complexity 1 35 0 1 739 1350 18 0 6 chrUextra 20257219 20257384 -8747272 - NTS_DM Other Other -39 201 38 1 739 936 9 0 27 chrUextra 20257384 20257496 -8747160 - NTS_DM Other Other -107 133 25 1 739 5452 49 25 3 chrUextra 20257600 20258278 -8746378 - R1_DM LINE R1 -3607 1749 1057 1 739 6288 1 0 1 chrUextra 20258378 20259056 -8745600 - LSU-rRNA_Dme rRNA rRNA -1396 2504 1828 1 739 991 73 6 20 chrUextra 20259160 20259792 -8744864 + RSP Satellite Satellite 1 623 0 1 739 1989 0 5 5 chrUextra 20259934 20260157 -8744499 + QUASIMODO_LTR LTR Gypsy 436 658 0 1 739 3951 2 2 26 chrUextra 20260157 20260612 -8744044 + QUASIMODO_I LTR Gypsy 1 444 -5616 1 739 1342 17 151 0 chrUextra 20260712 20260864 -8743792 - QUASIMODO_LTR LTR Gypsy -452 206 52 1 739 183 129 0 0 chrUextra 20260864 20260895 -8743761 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 739 1342 17 151 0 chrUextra 20260895 20260921 -8743735 - QUASIMODO_LTR LTR Gypsy -607 51 2 1 739 236 198 137 108 chrUextra 20261288 20261390 -8743266 + MICROPIA_I LTR Gypsy 1 105 -4371 1 739 6243 0 0 0 chrUextra 20261490 20262168 -8742488 - DMRT1B LINE R1 -1592 3591 2914 1 739 5196 58 3 4 chrUextra 20262268 20262943 -8741713 - BATUMI_I LTR Pao -2760 5154 4315 1 739 1158 149 0 3 chrUextra 20263046 20263719 -8740937 + (TA)n Simple_repeat Simple_repeat 1 670 0 1 739 675 0 0 0 chrUextra 20263824 20263897 -8740759 - NTS_DM Other Other -130 110 38 1 739 906 9 0 35 chrUextra 20263897 20264010 -8740646 - NTS_DM Other Other -107 133 25 1 739 22 56 0 0 chrUextra 20264037 20264073 -8740583 + AT_rich Low_complexity Low_complexity 1 36 0 1 739 278 176 0 19 chrUextra 20264086 20264138 -8740518 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 739 268 196 0 19 chrUextra 20264169 20264221 -8740435 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 739 268 196 0 19 chrUextra 20264261 20264313 -8740343 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 739 820 0 0 0 chrUextra 20264414 20264502 -8740154 - LSU-rRNA_Dme rRNA rRNA 0 3900 3813 1 739 2047 101 88 0 chrUextra 20264602 20264899 -8739757 - Gypsy12_I LTR Gypsy -759 4787 4465 1 739 2315 113 0 12 chrUextra 20264896 20265219 -8739437 - Gypsy12_I LTR Gypsy -3725 1821 1503 1 739 423 74 0 0 chrUextra 20265226 20265280 -8739376 - Gypsy12_I LTR Gypsy -3992 1554 1501 1 739 2913 92 77 112 chrUextra 20265380 20266016 -8738640 + PROTOP_B DNA P 540 1153 0 1 739 543 290 26 10 chrUextra 20266308 20266544 -8738112 + HMSBEAGLE_I LTR Gypsy 4106 4320 -2209 1 739 283 232 0 0 chrUextra 20266576 20266645 -8738011 + HMSBEAGLE_I LTR Gypsy 4379 4447 -2082 1 739 443 209 0 0 chrUextra 20266745 20266836 -8737820 - PROTOP_B DNA P -953 200 110 1 739 5887 15 0 0 chrUextra 20266936 20267612 -8737044 + STALKER4_I LTR Gypsy 2826 3501 -3029 1 739 5455 11 4 47 chrUextra 20267714 20268392 -8736264 + QUASIMODO_I LTR Gypsy 1581 2229 -3831 1 739 3131 181 25 9 chrUextra 20268492 20269170 -8735486 - SAR_DM Satellite Satellite -505 967 279 1 739 562 41 68 0 chrUextra 20269272 20269345 -8735311 - R1_DM LINE R1 -5278 78 1 1 739 2670 22 97 0 chrUextra 20269378 20269948 -8734708 - R1_DM LINE R1 0 5356 4732 1 739 3373 176 9 7 chrUextra 20270049 20270726 -8733930 - SAR_DM Satellite Satellite -549 923 246 1 739 3166 174 21 9 chrUextra 20270835 20271504 -8733152 - SAR_DM Satellite Satellite -396 1076 400 1 739 1092 74 20 0 chrUextra 20271604 20271753 -8732903 - R1_DM LINE R1 -5204 152 1 1 739 997 27 0 0 chrUextra 20271786 20271898 -8732758 - R1_DM LINE R1 0 5356 5245 1 739 3299 23 5 0 chrUextra 20271897 20272282 -8732374 - R1_DM LINE R1 -290 5066 4680 1 739 2982 62 0 5 chrUextra 20273986 20274374 -8730282 + BATUMI_I LTR Pao 7578 7963 0 1 739 1698 52 0 27 chrUextra 20274396 20274615 -8730041 + BATUMI_LTR LTR Pao 32 244 -28 1 739 23 68 0 0 chrUextra 20274720 20274764 -8729892 + AT_rich Low_complexity Low_complexity 1 44 0 1 739 29 60 0 0 chrUextra 20274810 20274860 -8729796 + AT_rich Low_complexity Low_complexity 1 50 0 1 739 1624 42 5 0 chrUextra 20275202 20275394 -8729262 - PROTOP DNA P 0 4480 4288 1 739 6197 0 1 4 chrUextra 20275494 20276172 -8728484 - SSU-rRNA_Dme rRNA rRNA -480 1515 840 1 739 2364 186 17 78 chrUextra 20276272 20276939 -8727717 + HETA LINE telomeric 3267 3832 -2249 1 739 3308 178 12 12 chrUextra 20277050 20277728 -8726928 + SAR_DM Satellite Satellite 256 933 -539 1 739 5672 12 18 0 chrUextra 20277828 20278506 -8726150 - Invader2_I LTR Gypsy -3825 767 78 1 739 28 48 0 0 chrUextra 20278791 20278833 -8725823 + AT_rich Low_complexity Low_complexity 1 42 0 1 739 32 0 0 0 chrUextra 20279162 20279194 -8725462 + AT_rich Low_complexity Low_complexity 1 32 0 1 739 3403 164 8 8 chrUextra 20279396 20280061 -8724595 + SAR_DM Satellite Satellite 369 1033 -439 1 739 2439 105 16 36 chrUextra 20280162 20280836 -8723820 - DMSAT6 Satellite Satellite -32 660 1 1 739 34 24 0 0 chrUextra 20281378 20281419 -8723237 + AT_rich Low_complexity Low_complexity 1 41 0 1 739 5776 4 0 0 chrUextra 20281718 20282396 -8722260 - ACCORD_I LTR Gypsy -311 5977 5300 1 739 3025 179 8 11 chrUextra 20282497 20283151 -8721505 + SAR_DM Satellite Satellite 425 1076 -396 1 739 5804 18 0 7 chrUextra 20283274 20283952 -8720704 - FW_DM LINE Jockey -2258 2434 1762 1 739 732 314 69 47 chrUextra 20284830 20285494 -8719162 + MDG1_I LTR Gypsy 2101 2779 -3817 1 739 5795 24 0 0 chrUextra 20285608 20286286 -8718370 - NINJA_I LTR Pao -3900 2111 1434 1 739 1964 186 7 6 chrUextra 20287164 20287842 -8716814 + SAR_DM Satellite Satellite 1 678 -548 1 739 4380 0 0 0 chrUextra 20287942 20288416 -8716240 - HOBO DNA hAT -2542 474 1 1 739 5855 12 0 0 chrUextra 20288720 20289398 -8715258 - ROO_I LTR Pao -4865 3391 2714 1 739 1130 0 8 0 chrUextra 20289498 20289626 -8715030 - R1_DM LINE R1 -5227 129 1 1 739 4963 2 0 2 chrUextra 20289626 20290176 -8714480 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2084 1 739 4857 3 3 43 chrUextra 20290276 20290879 -8713777 - LSU-rRNA_Dme rRNA rRNA -3321 579 1 1 739 21 95 0 0 chrUextra 20290891 20290954 -8713702 + AT_rich Low_complexity Low_complexity 1 63 0 1 739 1857 179 6 6 chrUextra 20291054 20291732 -8712924 + SAR_DM Satellite Satellite 1 678 -558 1 739 2919 3 0 0 chrUextra 20291832 20292151 -8712505 - LSU-rRNA_Dme rRNA rRNA -1794 2106 1788 1 739 2751 0 6 3 chrUextra 20292195 20292510 -8712146 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1473 1 739 1523 10 10 5 chrUextra 20292610 20292804 -8711852 + DOC LINE Jockey 4531 4725 0 1 739 277 106 0 21 chrUextra 20292993 20293041 -8711615 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 739 372 49 65 16 chrUextra 20293063 20293125 -8711531 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 739 771 186 0 7 chrUextra 20293124 20293270 -8711386 - DMLTR5 LTR Gypsy 0 266 122 1 739 932 146 6 30 chrUextra 20293397 20293566 -8711090 - TART LINE telomeric -7328 7149 6985 1 739 1848 150 180 40 chrUextra 20293566 20294066 -8710590 - HETA LINE telomeric 0 6081 5580 1 739 3257 169 7 14 chrUextra 20294166 20294844 -8709812 + SAR_DM Satellite Satellite 1 673 -411 1 739 5712 0 2 5 chrUextra 20294985 20295622 -8709034 - SSU-rRNA_Dme rRNA rRNA 0 1995 1361 1 739 6126 0 0 4 chrUextra 20295722 20296400 -8708256 - BEL_I LTR Pao -2855 2549 1875 1 739 2356 188 46 7 chrUextra 20296502 20297087 -8707569 - SAR_DM Satellite Satellite -532 940 333 1 739 569 131 10 0 chrUextra 20297077 20297176 -8707480 + ARS406_DM Unknown Unknown 50 149 -204 1 739 3165 171 14 11 chrUextra 20297279 20297942 -8706714 - SAR_DM Satellite Satellite -482 990 326 1 739 309 51 0 0 chrUextra 20298562 20298601 -8706055 + (TA)n Simple_repeat Simple_repeat 2 40 0 1 739 422 342 25 44 chrUextra 20298845 20299160 -8705496 + Gypsy6_I LTR Gypsy 1476 1784 -5228 1 739 5721 25 1 1 chrUextra 20299612 20300290 -8704366 - R1_DM LINE R1 -1023 4333 3656 1 739 4623 61 22 1 chrUextra 20300390 20301068 -8703588 + STALKER4_I LTR Gypsy 5819 6510 -20 1 739 1676 178 54 9 chrUextra 20301171 20301843 -8702813 - SAR_DM Satellite Satellite -511 702 1 1 739 21 89 0 0 chrUextra 20302242 20302298 -8702358 + AT_rich Low_complexity Low_complexity 1 56 0 1 739 6209 1 1 0 chrUextra 20302724 20303402 -8701254 - LSU-rRNA_Dme rRNA rRNA -158 3742 3064 1 739 5855 12 19 7 chrUextra 20303502 20304180 -8700476 - Gypsy4_I LTR Gypsy -3977 2311 1626 1 739 6157 3 0 0 chrUextra 20304280 20304958 -8699698 + GTWIN_I LTR Gypsy 497 1174 -5247 1 739 3245 174 18 7 chrUextra 20305841 20306513 -8698143 + SAR_DM Satellite Satellite 352 1030 -442 1 739 3195 183 7 7 chrUextra 20306614 20307292 -8697364 - SAR_DM Satellite Satellite -539 933 256 1 739 5999 1 0 0 chrUextra 20307392 20308070 -8696586 + ROO_I LTR Pao 4831 5508 -2748 1 739 6060 1 0 0 chrUextra 20308170 20308848 -8695808 - ROO_I LTR Pao -1032 7224 6547 1 739 3255 160 30 16 chrUextra 20308948 20309626 -8695030 - SAR_DM Satellite Satellite -453 1019 333 1 739 6054 0 1 0 chrUextra 20309726 20310404 -8694252 + Invader3_I LTR Gypsy 2095 2773 -2115 1 739 5876 1 0 1 chrUextra 20310504 20311182 -8693474 - DM176_I LTR Gypsy -1333 5087 4411 1 739 3020 172 16 19 chrUextra 20311287 20311957 -8692699 - SAR_DM Satellite Satellite -512 960 293 1 739 505 332 16 45 chrUextra 20312244 20312556 -8692100 + HMSBEAGLE_I LTR Gypsy 2644 2946 -3583 1 739 5605 34 3 0 chrUextra 20312838 20313516 -8691140 - MDG3_I LTR Gypsy -3193 1793 1114 1 739 3161 170 30 9 chrUextra 20313617 20314286 -8690370 - SAR_DM Satellite Satellite -441 1031 349 1 739 6014 0 1 0 chrUextra 20314394 20315072 -8689584 - ROO_I LTR Pao -2117 6139 5461 1 739 5954 0 0 1 chrUextra 20315172 20315850 -8688806 - LSU-rRNA_Dme rRNA rRNA -2871 1029 353 1 92 6054 1 3 3 chrUextra 20315950 20316628 -8688028 - SSU-rRNA_Dme rRNA rRNA -412 1583 906 1 740 3311 173 7 7 chrUextra 20316728 20317404 -8687252 - SAR_DM Satellite Satellite -428 1044 369 1 740 30 0 0 0 chrUextra 20317565 20317595 -8687061 + AT_rich Low_complexity Low_complexity 1 30 0 1 740 28 48 0 0 chrUextra 20317923 20317965 -8686691 + AT_rich Low_complexity Low_complexity 1 42 0 1 740 311 189 32 43 chrUextra 20318284 20318378 -8686278 + XDMR_DM Unknown Unknown 261 353 -7 1 740 2647 197 9 21 chrUextra 20318299 20318962 -8685694 - SAR_DM Satellite Satellite -353 1119 465 1 740 6013 9 0 0 chrUextra 20319062 20319740 -8684916 - R1_DM LINE R1 -2271 3085 2408 1 740 1068 298 27 27 chrUextra 20319840 20320313 -8684343 - Copia2_I LTR Copia -2212 1950 1386 1 740 6208 1 0 0 chrUextra 20320618 20321296 -8683360 - NOMAD_I LTR Gypsy -2829 3743 3066 1 740 5863 21 1 0 chrUextra 20321396 20322074 -8682582 - R1_DM LINE R1 -2824 2532 1854 1 740 5811 9 0 1 chrUextra 20322175 20322852 -8681804 + Invader2_I LTR Gypsy 3313 3988 -604 1 740 4800 14 34 0 chrUextra 20322952 20323542 -8681114 - QUASIMODO_I LTR Gypsy -1956 4104 3495 1 740 751 11 11 0 chrUextra 20323540 20323629 -8681027 + BS2 LINE Jockey 957 1046 -3675 1 740 6067 0 1 1 chrUextra 20323730 20324408 -8680248 + STALKER4_I LTR Gypsy 3594 4271 -2259 1 740 4670 75 112 0 chrUextra 20324508 20325186 -8679470 + TART LINE telomeric 983 1736 -12741 1 740 3831 0 2 0 chrUextra 20325286 20325704 -8678952 + SSU-rRNA_Dme rRNA rRNA 1577 1995 0 1 740 6066 3 18 0 chrUextra 20326064 20326742 -8677914 + FW_DM LINE Jockey 3434 4123 -569 1 740 2955 193 16 23 chrUextra 20326843 20327519 -8677137 - SAR_DM Satellite Satellite -645 670 1 1 740 2365 95 6 43 chrUextra 20327619 20328296 -8676360 - DMSAT6 Satellite Satellite -89 651 1 1 740 5732 19 6 3 chrUextra 20328396 20329073 -8675583 - R1_DM LINE R1 -1436 3920 3242 1 740 1578 0 20 15 chrUextra 20329173 20329373 -8675283 + NTS_DM Other Other 40 240 0 1 740 1940 0 17 13 chrUextra 20329373 20329612 -8675044 + NTS_DM Other Other 1 240 0 1 740 1874 13 17 13 chrUextra 20329612 20329850 -8674806 + NTS_DM Other Other 1 239 -1 1 740 1276 22 22 22 chrUextra 20329950 20330135 -8674521 + NTS_DM Other Other 56 240 0 1 740 1908 8 17 13 chrUextra 20330135 20330374 -8674282 + NTS_DM Other Other 1 240 0 1 740 1904 8 17 13 chrUextra 20330374 20330613 -8674043 + NTS_DM Other Other 1 240 0 1 740 2872 197 15 23 chrUextra 20330728 20331404 -8673252 - SAR_DM Satellite Satellite -645 670 1 1 740 21 89 0 0 chrUextra 20331830 20331886 -8672770 + AT_rich Low_complexity Low_complexity 1 56 0 1 740 2515 0 4 0 chrUextra 20331905 20332181 -8672475 - SSU-rRNA_Dme rRNA rRNA 0 1995 1719 1 740 5231 61 1 9 chrUextra 20332281 20332958 -8671698 + BATUMI_I LTR Pao 3519 4190 -3773 1 740 985 0 0 0 chrUextra 20333058 20333172 -8671484 - R1_DM LINE R1 -4391 965 852 1 740 419 21 0 0 chrUextra 20333169 20333216 -8671440 - LSU-rRNA_Dme rRNA rRNA -1214 2686 2640 1 740 2897 9 0 0 chrUextra 20333214 20333532 -8671124 - R1_DM LINE R1 0 5356 5039 1 740 1793 5 0 0 chrUextra 20333542 20333735 -8670921 - R1_DM LINE R1 0 5356 5164 1 740 3708 51 49 0 chrUextra 20333837 20334504 -8670152 + PROTOP DNA P 203 766 -339 1 740 3030 39 2 104 chrUextra 20334612 20335093 -8669563 + ROO_I LTR Pao 715 1146 -7110 1 740 3035 110 2 21 chrUextra 20335389 20335854 -8668802 - TART LINE telomeric -7269 7208 6753 1 740 622 232 22 44 chrUextra 20335848 20336028 -8668628 - TART LINE telomeric -1219 13258 13083 1 740 767 120 8 0 chrUextra 20336166 20336291 -8668365 - ARS406_DM Unknown Unknown -226 127 2 1 740 3177 174 12 9 chrUextra 20336186 20336842 -8667814 + SAR_DM Satellite Satellite 180 837 -635 1 740 726 211 6 34 chrUextra 20336943 20337120 -8667536 - TART_B1 LINE telomeric -10088 566 395 1 740 1198 124 262 34 chrUextra 20337121 20337388 -8667268 - TART LINE telomeric -10539 3938 3611 1 740 1628 84 0 13 chrUextra 20337390 20337620 -8667036 - TART LINE telomeric -6448 8029 7803 1 740 2321 103 76 12 chrUextra 20338514 20339171 -8665485 - DMSAT6 Satellite Satellite -7 698 1 1 740 1878 194 124 51 chrUextra 20339274 20339934 -8664722 + HETA LINE telomeric 5098 5739 -342 1 740 3197 171 12 11 chrUextra 20340051 20340701 -8663955 + SAR_DM Satellite Satellite 377 1027 -445 1 740 6149 1 0 1 chrUextra 20340828 20341505 -8663151 - R1_DM LINE R1 -1642 3714 3039 1 740 2868 197 25 9 chrUextra 20341605 20342277 -8662379 - SAR_DM Satellite Satellite -610 862 180 1 740 6063 9 0 0 chrUextra 20342382 20343059 -8661597 + ROO_I LTR Pao 2696 3372 -4884 1 740 28 48 0 0 chrUextra 20343390 20343432 -8661224 + AT_rich Low_complexity Low_complexity 1 42 0 1 740 32 0 0 0 chrUextra 20343760 20343792 -8660864 + AT_rich Low_complexity Low_complexity 1 32 0 1 740 2680 199 8 15 chrUextra 20343940 20344600 -8660056 - SAR_DM Satellite Satellite -683 655 1 1 740 5661 42 0 9 chrUextra 20344713 20345390 -8659266 - R1_DM LINE R1 -3369 1987 1317 1 740 3444 10 0 3 chrUextra 20345490 20345882 -8658774 + FW_DM LINE Jockey 4301 4691 -1 1 740 938 91 0 12 chrUextra 20345944 20346108 -8658548 + RSP Satellite Satellite 1 162 -1 1 740 970 65 6 19 chrUextra 20346267 20346944 -8657712 + RSP Satellite Satellite 1 668 0 1 740 5166 63 3 12 chrUextra 20347044 20347721 -8656935 + BATUMI_I LTR Pao 3061 3731 -4232 1 740 2927 38 16 5 chrUextra 20348131 20348498 -8656158 + CIRCE LINE Composite 4981 5351 -1005 1 740 774 0 0 0 chrUextra 20348598 20348684 -8655972 + (TCTA)n Simple_repeat Simple_repeat 1 86 0 1 740 3446 161 10 15 chrUextra 20349375 20350049 -8654607 - SAR_DM Satellite Satellite -449 1023 353 1 740 6032 12 6 0 chrUextra 20350152 20350829 -8653827 - FW_DM LINE Jockey -197 4495 3815 1 740 6155 6 0 0 chrUextra 20351706 20352383 -8652273 + R1_DM LINE R1 3982 4658 -698 1 740 2548 94 25 22 chrUextra 20352484 20353159 -8651497 + DMSAT6 Satellite Satellite 1 677 -74 1 740 1869 183 16 8 chrUextra 20353260 20353937 -8650719 + SAR_DM Satellite Satellite 1 683 -749 1 740 2888 82 162 4 chrUextra 20354037 20354488 -8650168 + BATUMI_I LTR Pao 1050 1571 -6392 1 740 1686 36 9 26 chrUextra 20354487 20354714 -8649942 + BATUMI_I LTR Pao 1920 2142 -5821 1 740 5854 22 1 1 chrUextra 20354814 20355491 -8649165 + STALKER4_I LTR Gypsy 1781 2457 -4073 1 740 2242 166 29 67 chrUextra 20356394 20357045 -8647611 - HETA LINE telomeric -5402 679 35 1 740 4660 41 143 1 chrUextra 20357145 20357822 -8646834 + R1_DM LINE R1 1055 1827 -3529 1 740 6074 1 3 0 chrUextra 20357922 20358599 -8646057 - ROO_I LTR Pao -4267 3989 3311 1 740 1878 269 22 39 chrUextra 20358709 20359375 -8645281 - FROGGER_I LTR Copia -40 2037 1383 1 740 6195 1 0 1 chrUextra 20359476 20360150 -8644506 - FW_DM LINE Jockey -2258 2434 1762 1 740 1310 104 148 0 chrUextra 20360253 20360570 -8644086 + STALKER4_I LTR Gypsy 3210 3573 -2957 1 740 24 32 0 0 chrUextra 20360588 20360619 -8644037 + AT_rich Low_complexity Low_complexity 1 31 0 1 740 267 215 11 151 chrUextra 20360676 20360769 -8643887 + DM176_LTR LTR Gypsy 190 269 -238 1 740 4199 19 0 0 chrUextra 20361030 20361503 -8643153 + R1_DM LINE R1 4884 5356 0 1 740 1356 58 6 0 chrUextra 20361535 20361707 -8642949 + R1_DM LINE R1 1 173 -5183 1 740 5363 30 3 2 chrUextra 20361807 20362441 -8642215 - PROTOP DNA P -3845 635 1 1 740 2572 85 42 18 chrUextra 20362585 20363255 -8641401 + DMSAT6 Satellite Satellite 1 686 -97 1 740 6015 19 0 0 chrUextra 20363361 20364037 -8640619 + G_DM LINE Jockey 2976 3651 -695 1 740 207 170 0 0 chrUextra 20364138 20364185 -8640471 + (CTATT)n Simple_repeat Simple_repeat 3 49 0 1 740 6303 3 0 0 chrUextra 20364915 20365592 -8639064 + R2_DM LINE R2 2775 3451 -156 1 740 6029 13 0 4 chrUextra 20365692 20366369 -8638287 + FW_DM LINE Jockey 2073 2746 -1946 1 740 1100 24 0 0 chrUextra 20366469 20366595 -8638061 + Copia2_LTR_DM LTR Copia 73 198 0 1 740 4979 9 0 0 chrUextra 20366595 20367146 -8637510 + Copia2_I LTR Copia 1 551 -3611 1 740 5996 15 0 0 chrUextra 20367246 20367923 -8636733 + STALKER4_I LTR Gypsy 4546 5222 -1308 1 740 1232 14 0 0 chrUextra 20368023 20368162 -8636494 - NTS_DM Other Other -101 139 1 1 740 1878 21 17 17 chrUextra 20368162 20368402 -8636254 - NTS_DM Other Other 0 240 1 1 740 1874 21 17 17 chrUextra 20368402 20368642 -8636014 - NTS_DM Other Other 0 240 1 1 740 5876 31 1 0 chrUextra 20368800 20369477 -8635179 - MAX_I LTR Pao -3066 4848 4171 1 740 5751 32 0 0 chrUextra 20369577 20370254 -8634402 + MDG1_I LTR Gypsy 2003 2679 -3917 1 740 6017 15 0 0 chrUextra 20370354 20371031 -8633625 + FW_DM LINE Jockey 2260 2936 -1756 1 740 6287 1 1 1 chrUextra 20371131 20371808 -8632848 - LSU-rRNA_Dme rRNA rRNA -279 3621 2945 1 740 1927 190 14 8 chrUextra 20371912 20372585 -8632071 + SAR_DM Satellite Satellite 1 677 -569 1 740 3283 164 9 15 chrUextra 20372685 20373346 -8631310 - SAR_DM Satellite Satellite -490 982 326 1 740 1250 19 6 12 chrUextra 20373462 20373624 -8631032 + NTS_DM Other Other 41 201 -39 1 740 21 57 0 0 chrUextra 20373624 20373659 -8630997 + AT_rich Low_complexity Low_complexity 1 35 0 1 740 898 9 9 27 chrUextra 20373685 20373796 -8630860 + NTS_DM Other Other 25 133 -107 1 740 876 0 0 0 chrUextra 20373796 20373892 -8630764 + NTS_DM Other Other 38 133 -107 1 740 1526 20 20 20 chrUextra 20373892 20374095 -8630561 + NTS_DM Other Other 38 240 0 1 740 366 45 0 0 chrUextra 20374095 20374139 -8630517 + NTS_DM Other Other 1 44 -196 1 740 6322 0 0 1 chrUextra 20374239 20374916 -8629740 + LSU-rRNA_Dme rRNA rRNA 2549 3224 -676 1 740 549 228 14 14 chrUextra 20375016 20375154 -8629502 + HETRP_DM Satellite Satellite 1548 1685 -187 1 740 766 178 13 26 chrUextra 20375312 20375468 -8629188 + HETRP_DM Satellite Satellite 1529 1682 -190 1 740 400 138 0 0 chrUextra 20375617 20375675 -8628981 + HETRP_DM Satellite Satellite 1529 1586 -286 1 740 6019 4 1 1 chrUextra 20375793 20376470 -8628186 - G_DM LINE Jockey -1959 2387 1711 1 740 2788 181 10 9 chrUextra 20377348 20378024 -8626632 + SAR_DM Satellite Satellite 1 676 -677 1 740 428 314 57 42 chrUextra 20378202 20378800 -8625856 + BLOOD_I LTR Gypsy 1456 2062 -4551 1 740 5988 1 1 1 chrUextra 20378901 20379578 -8625078 - ZAM_I LTR Gypsy -2053 5437 4761 1 740 228 36 0 0 chrUextra 20379678 20379706 -8624950 - PROTOP_B DNA P -1052 101 74 1 740 6121 10 1 0 chrUextra 20380458 20381132 -8623524 - Gypsy2_I LTR Gypsy -4445 1690 1016 1 740 2873 191 51 30 chrUextra 20381232 20381909 -8622747 + SAR_DM Satellite Satellite 1 691 -396 1 740 1498 71 119 0 chrUextra 20382009 20382219 -8622437 - Gypsy12_I LTR Gypsy -847 4699 4465 1 740 2305 110 0 15 chrUextra 20382216 20382540 -8622116 - Gypsy12_I LTR Gypsy -3725 1821 1503 1 740 1015 79 14 0 chrUextra 20382547 20382686 -8621970 - Gypsy12_I LTR Gypsy -3992 1554 1414 1 740 4646 30 0 22 chrUextra 20382786 20383338 -8621318 + CIRCE LINE Composite 2375 2914 -3442 1 740 1077 16 0 8 chrUextra 20383339 20383463 -8621193 + CIRCE LINE Composite 3035 3157 -3199 1 740 3267 175 8 9 chrUextra 20383583 20384239 -8620417 - SAR_DM Satellite Satellite -396 1076 422 1 740 6012 9 0 1 chrUextra 20384340 20385017 -8619639 - DMRT1B LINE R1 -2234 2949 2274 1 740 1767 294 28 27 chrUextra 20385117 20385794 -8618862 + Gypsy_DS LTR Gypsy 643 1902 -5620 1 740 2076 187 34 10 chrUextra 20385894 20385921 -8618735 - SAR_DM Satellite Satellite -801 693 659 1 740 1060 86 0 0 chrUextra 20385921 20386072 -8618584 + ARS406_DM Unknown Unknown 1 151 -202 1 740 2076 187 34 10 chrUextra 20386072 20386571 -8618085 - SAR_DM Satellite Satellite -801 658 1 1 740 328 239 92 0 chrUextra 20386682 20386899 -8617757 + (CAAGA)n Simple_repeat Simple_repeat 1 236 0 1 740 330 162 117 12 chrUextra 20387032 20387194 -8617462 + (CAGA)n Simple_repeat Simple_repeat 2 180 0 1 740 5982 19 1 0 chrUextra 20387448 20388125 -8616531 - R1_DM LINE R1 -693 4663 3986 1 740 221 208 38 0 chrUextra 20389606 20389659 -8614997 + (CATA)n Simple_repeat Simple_repeat 1 55 0 1 740 6083 0 1 4 chrUextra 20389779 20390456 -8614200 + SSU-rRNA_Dme rRNA rRNA 1060 1734 -261 1 740 3079 171 18 14 chrUextra 20390562 20391225 -8613431 + SAR_DM Satellite Satellite 230 895 -577 1 740 4897 22 61 0 chrUextra 20391333 20392010 -8612646 - R1_DM LINE R1 -1786 3570 2853 1 740 2375 207 61 21 chrUextra 20392889 20393563 -8611093 + SAR_DM Satellite Satellite 1 701 -216 1 740 6029 3 0 3 chrUextra 20393664 20394341 -8610315 + R1_DM LINE R1 4644 5318 -38 1 740 3083 186 6 7 chrUextra 20394441 20395118 -8609538 - SAR_DM Satellite Satellite -588 884 209 1 740 1222 7 0 0 chrUextra 20395351 20395486 -8609170 - 5S_DM RNA RNA 0 135 1 1 740 1222 7 0 0 chrUextra 20395717 20395852 -8608804 - 5S_DM RNA RNA 0 135 1 1 740 5768 24 1 0 chrUextra 20395995 20396672 -8607984 - FW_DM LINE Jockey -3860 832 155 1 740 1461 214 45 56 chrUextra 20396780 20397419 -8607237 + SAR_DM Satellite Satellite 1 631 -353 1 740 255 150 0 0 chrUextra 20397409 20397449 -8607207 - XDMR_DM Unknown Unknown -280 80 41 1 740 5857 21 1 1 chrUextra 20397549 20398224 -8606432 - BATUMI_I LTR Pao -2430 5533 4859 1 740 3251 168 10 10 chrUextra 20398330 20399003 -8605653 - SAR_DM Satellite Satellite -411 1061 389 1 740 1439 6 0 11 chrUextra 20399103 20399278 -8605378 - STALKER4_LTR LTR Gypsy -229 173 1 1 740 3889 18 10 2 chrUextra 20399278 20399780 -8604876 - STALKER4_I LTR Gypsy 0 6530 6025 1 740 4709 14 58 0 chrUextra 20399880 20400557 -8604099 + STALKER4_I LTR Gypsy 1514 2229 -4301 1 740 2784 185 9 27 chrUextra 20400657 20401334 -8603322 - SAR_DM Satellite Satellite -603 869 205 1 740 3588 12 0 0 chrUextra 20401434 20401852 -8602804 + FW_DM LINE Jockey 4275 4692 0 1 740 1123 230 0 4 chrUextra 20401853 20402106 -8602550 - TAHRE LINE telomeric -9343 1120 869 1 740 1621 143 117 81 chrUextra 20402211 20402888 -8601768 - MAX_I LTR Pao -6399 1515 938 1 740 3213 176 6 7 chrUextra 20402989 20403665 -8600991 - SAR_DM Satellite Satellite -593 879 205 1 740 3185 178 6 13 chrUextra 20403765 20404442 -8600214 - SAR_DM Satellite Satellite -398 1074 403 1 740 34 24 0 0 chrUextra 20404614 20404655 -8600001 + AT_rich Low_complexity Low_complexity 1 41 0 1 740 21 95 0 0 chrUextra 20404868 20404931 -8599725 + AT_rich Low_complexity Low_complexity 1 63 0 1 740 2072 4 0 91 chrUextra 20404943 20405219 -8599437 + LSU-rRNA_Dme rRNA rRNA 1 251 -3649 1 740 1310 6 90 0 chrUextra 20405712 20405868 -8598788 + PROTOP_B DNA P 1 170 -983 1 740 583 177 0 46 chrUextra 20405866 20405996 -8598660 + TART LINE telomeric 3548 3671 -10806 1 740 6137 1 0 1 chrUextra 20406096 20406773 -8597883 - LSU-rRNA_Dme rRNA rRNA -1428 2472 1797 1 740 5588 49 3 0 chrUextra 20406873 20407550 -8597106 + DIVER_I LTR Pao 93 771 -4872 1 740 997 0 0 0 chrUextra 20407650 20407760 -8596896 - NTS_DM Other Other -130 110 1 1 740 1912 4 17 13 chrUextra 20407760 20407999 -8596657 - NTS_DM Other Other 0 240 1 1 740 1918 4 17 13 chrUextra 20407999 20408238 -8596418 - NTS_DM Other Other 0 240 1 1 740 619 0 45 34 chrUextra 20408238 20408327 -8596329 - NTS_DM Other Other 0 240 151 1 740 227 129 31 31 chrUextra 20408692 20408756 -8595900 + (TAA)n Simple_repeat Simple_repeat 2 65 0 1 740 2951 104 11 51 chrUextra 20409205 20409679 -8594977 + Gypsy12_LTR LTR Gypsy 1859 2313 -23 1 740 566 247 142 21 chrUextra 20409691 20409881 -8594775 + TAHRE LINE telomeric 9807 10019 -444 1 740 5925 0 0 3 chrUextra 20409981 20410658 -8593998 + ROO_I LTR Pao 2711 3385 -4871 1 740 1945 302 4 4 chrUextra 20410760 20411435 -8593221 + ROVER-I_DM LTR Gypsy 925 1599 -4985 1 740 6049 1 1 0 chrUextra 20411535 20412212 -8592444 + DOC LINE Jockey 1258 1935 -2790 1 740 31 26 0 0 chrUextra 20412928 20412966 -8591690 + AT_rich Low_complexity Low_complexity 1 38 0 1 740 236 0 0 0 chrUextra 20413089 20413115 -8591541 - NTS_DM Other Other -214 26 1 1 740 1885 8 17 17 chrUextra 20413115 20413355 -8591301 - NTS_DM Other Other 0 240 1 1 740 1889 13 17 13 chrUextra 20413355 20413594 -8591062 - NTS_DM Other Other 0 240 1 1 740 1153 24 23 23 chrUextra 20413594 20413766 -8590890 - NTS_DM Other Other 0 240 69 1 740 6042 6 0 0 chrUextra 20413866 20414543 -8590113 + DMRT1B LINE R1 1325 2001 -3182 1 740 6101 4 0 3 chrUextra 20414643 20415320 -8589336 + SSU-rRNA_Dme rRNA rRNA 28 702 -1293 1 740 495 182 0 0 chrUextra 20415975 20416096 -8588560 + (CATAG)n Simple_repeat Simple_repeat 4 124 0 1 740 5939 1 0 0 chrUextra 20416197 20416874 -8587782 - LSU-rRNA_Dme rRNA rRNA -2964 936 260 1 740 183 80 0 0 chrUextra 20416982 20417007 -8587649 + (TATG)n Simple_repeat Simple_repeat 4 28 0 1 740 2924 9 0 0 chrUextra 20417007 20417345 -8587311 - STALKER4_I LTR Gypsy -1218 5312 4975 1 740 1586 129 16 13 chrUextra 20417344 20417651 -8587005 + DMSAT6 Satellite Satellite 57 364 -106 1 740 5783 7 0 0 chrUextra 20417751 20418428 -8586228 + Invader2_I LTR Gypsy 2737 3413 -1179 1 740 3093 169 27 9 chrUextra 20418542 20419205 -8585451 - SAR_DM Satellite Satellite -411 1061 387 1 740 411 214 9 18 chrUextra 20419305 20419419 -8585237 + XDMR_DM Unknown Unknown 248 360 0 1 740 2835 184 8 19 chrUextra 20419333 20419979 -8584677 - SAR_DM Satellite Satellite -353 1119 481 1 740 3012 164 24 14 chrUextra 20420089 20420755 -8583901 + SAR_DM Satellite Satellite 180 852 -620 1 740 3100 182 8 12 chrUextra 20420874 20421536 -8583120 - SAR_DM Satellite Satellite -558 914 256 1 740 6008 1 0 0 chrUextra 20421636 20422313 -8582343 + ROO_I LTR Pao 6619 7295 -961 1 740 395 86 0 33 chrUextra 20422413 20422473 -8582183 + STALKER4_I LTR Gypsy 2137 2194 -4336 1 740 291 28 0 0 chrUextra 20422482 20422518 -8582138 + STALKER4_I LTR Gypsy 2315 2350 -4180 1 740 1520 100 29 0 chrUextra 20422520 20422761 -8581895 + STALKER4_I LTR Gypsy 2617 2864 -3666 1 740 2049 68 3 35 chrUextra 20422760 20423049 -8581607 - Gypsy6A_LTR LTR Gypsy -70 350 71 1 740 1405 25 25 20 chrUextra 20423190 20423390 -8581266 + NTS_DM Other Other 40 240 0 1 740 1930 4 17 13 chrUextra 20423390 20423629 -8581027 + NTS_DM Other Other 1 240 0 1 740 1929 0 17 13 chrUextra 20423629 20423867 -8580789 + NTS_DM Other Other 1 239 -1 1 740 6005 10 0 0 chrUextra 20423968 20424644 -8580012 - DMRT1B LINE R1 -551 4632 3957 1 740 3128 183 6 9 chrUextra 20424744 20425421 -8579235 - SAR_DM Satellite Satellite -593 879 205 1 740 3036 175 18 12 chrUextra 20425521 20426198 -8578458 + SAR_DM Satellite Satellite 240 920 -552 1 740 5242 64 6 1 chrUextra 20426298 20426975 -8577681 - FB4_DM DNA Tc1 -1663 2426 1747 1 740 6083 5 0 0 chrUextra 20427085 20427752 -8576904 + SSU-rRNA_Dme rRNA rRNA 1 667 -1328 1 740 3102 168 15 15 chrUextra 20427855 20428521 -8576135 + SAR_DM Satellite Satellite 293 958 -514 1 740 5708 12 0 0 chrUextra 20428629 20429306 -8575350 + DM176_I LTR Gypsy 1275 1951 -4469 1 740 2965 179 8 18 chrUextra 20429406 20430071 -8574585 + SAR_DM Satellite Satellite 462 1119 -353 1 740 339 223 0 11 chrUextra 20429986 20430081 -8574575 - XDMR_DM Unknown Unknown 0 360 267 1 740 5939 4 0 0 chrUextra 20430183 20430860 -8573796 - STALKER4_I LTR Gypsy -447 6083 5407 1 740 2802 186 8 27 chrUextra 20430961 20431626 -8573030 + SAR_DM Satellite Satellite 452 1103 -369 1 740 230 111 0 62 chrUextra 20431585 20431633 -8573023 - XDMR Unknown Unknown 0 361 317 1 740 21 95 0 0 chrUextra 20431903 20431966 -8572690 + AT_rich Low_complexity Low_complexity 1 63 0 1 740 3538 0 0 57 chrUextra 20431978 20432414 -8572242 + LSU-rRNA_Dme rRNA rRNA 1 411 -3489 1 740 189 147 0 0 chrUextra 20432611 20432645 -8572011 + (TTTTTG)n Simple_repeat Simple_repeat 1 34 0 1 740 47 0 0 0 chrUextra 20432984 20433031 -8571625 + AT_rich Low_complexity Low_complexity 1 47 0 1 740 862 22 7 69 chrUextra 20433047 20433191 -8571465 - Gypsy4_I LTR Gypsy -5911 377 243 1 740 1620 0 0 0 chrUextra 20433291 20433525 -8571131 + (GAGAA)n Simple_repeat Simple_repeat 1 234 0 1 740 3525 198 0 0 chrUextra 20434068 20434745 -8569911 - ROVER-I_DM LTR Gypsy -2726 3858 3182 1 740 1144 15 0 0 chrUextra 20434845 20434977 -8569679 + DMRT1B LINE R1 5052 5183 0 1 740 4486 23 0 4 chrUextra 20434993 20435522 -8569134 - R1_DM LINE R1 -2784 2572 2046 1 740 4537 35 35 0 chrUextra 20435622 20436190 -8568466 - PROTOP DNA P -3892 588 1 1 740 1251 193 43 4 chrUextra 20436399 20437067 -8567589 + SAR_DM Satellite Satellite 1 693 -511 1 740 6145 0 3 0 chrUextra 20437176 20437853 -8566803 - DIVER_I LTR Pao -894 4749 4071 1 740 2673 88 30 10 chrUextra 20437953 20438356 -8566300 - MDG1_I LTR Gypsy -6185 411 1 1 740 1912 99 0 4 chrUextra 20438356 20438630 -8566026 - MDG1_LTR LTR Gypsy -30 412 140 1 740 5556 0 1 37 chrUextra 20438730 20439407 -8565249 + LSU-rRNA_Dme rRNA rRNA 49 701 -3199 1 740 6011 16 0 1 chrUextra 20439507 20440184 -8564472 - MAX_I LTR Pao -3807 4107 3432 1 740 1165 7 7 20 chrUextra 20440284 20440432 -8564224 + NTS_DM Other Other 17 162 -78 1 740 514 119 36 0 chrUextra 20440542 20440626 -8564030 + NTS_DM Other Other 4 90 -150 1 740 28 48 0 0 chrUextra 20440898 20440940 -8563716 + AT_rich Low_complexity Low_complexity 1 42 0 1 740 2343 129 137 54 chrUextra 20441061 20441600 -8563056 + HOBO DNA hAT 2433 3016 0 1 740 633 195 8 23 chrUextra 20441607 20441738 -8562918 - HETRP_DM Satellite Satellite -197 1675 1547 1 740 21 89 0 0 chrUextra 20442026 20442082 -8562574 + AT_rich Low_complexity Low_complexity 1 56 0 1 740 3756 0 2 2 chrUextra 20442101 20442515 -8562141 - SSU-rRNA_Dme rRNA rRNA 0 1995 1582 1 740 1292 19 0 18 chrUextra 20442615 20442779 -8561877 + (TAA)n Simple_repeat Simple_repeat 2 162 0 1 740 1437 152 93 13 chrUextra 20442781 20443081 -8561575 + MDG1_LTR LTR Gypsy 89 412 -30 1 740 765 252 14 10 chrUextra 20443082 20443290 -8561366 + BS2 LINE Jockey 2721 2929 -1792 1 740 5905 0 4 1 chrUextra 20443392 20444069 -8560587 - TABOR_I LTR Gypsy -5271 1065 387 1 740 5850 0 1 3 chrUextra 20444169 20444846 -8559810 - SSU-rRNA_Dme rRNA rRNA -57 1938 1263 1 740 264 188 0 0 chrUextra 20445277 20445341 -8559315 + Gypsy8_I LTR Gypsy 230 293 -4054 1 740 2082 29 18 0 chrUextra 20445341 20445613 -8559043 + PROTOP DNA P 296 572 -3908 1 740 5728 9 3 0 chrUextra 20446500 20447177 -8557479 + STALKER4_I LTR Gypsy 3798 4476 -2054 1 741 5914 0 0 1 chrUextra 20447277 20447954 -8556702 + LSU-rRNA_Dme rRNA rRNA 2644 3319 -581 1 741 5176 8 30 12 chrUextra 20448054 20448731 -8555925 + MDG1_I LTR Gypsy 534 1222 -5374 1 741 5819 1 0 4 chrUextra 20448831 20449508 -8555148 + SSU-rRNA_Dme rRNA rRNA 379 1052 -943 1 741 5799 0 1 4 chrUextra 20449608 20450285 -8554371 - SSU-rRNA_Dme rRNA rRNA -635 1360 686 1 741 237 149 0 0 chrUextra 20450385 20450432 -8554224 - ARS406_DM Unknown Unknown -306 47 1 1 741 2929 177 12 8 chrUextra 20450392 20451062 -8553594 + SAR_DM Satellite Satellite 246 918 -554 1 741 4548 104 3 4 chrUextra 20451162 20451839 -8552817 - Gypsy12_I LTR Gypsy -3022 2524 1849 1 741 2861 177 13 15 chrUextra 20451944 20452615 -8552041 - SAR_DM Satellite Satellite -396 1076 407 1 741 2890 153 36 17 chrUextra 20452729 20453392 -8551264 + SAR_DM Satellite Satellite 369 1044 -428 1 741 5420 34 0 0 chrUextra 20453493 20454170 -8550486 - R1_DM LINE R1 -2148 3208 2532 1 741 379 202 10 29 chrUextra 20454270 20454372 -8550284 + HETRP_DM Satellite Satellite 1570 1669 -203 1 741 668 179 7 14 chrUextra 20454510 20454652 -8550004 + HETRP_DM Satellite Satellite 1529 1669 -203 1 741 587 217 0 47 chrUextra 20454796 20454946 -8549710 + HETRP_DM Satellite Satellite 1518 1660 -212 1 741 279 179 0 0 chrUextra 20457210 20457277 -8547379 + (TTATG)n Simple_repeat Simple_repeat 2 68 0 1 741 2060 12 4 0 chrUextra 20457378 20457628 -8547028 + R2_DM LINE R2 3355 3605 -2 1 741 433 55 0 0 chrUextra 20457624 20457679 -8546977 + LSU-rRNA_Dme rRNA rRNA 2578 2632 -1268 1 741 2185 74 33 24 chrUextra 20457679 20458055 -8546601 + R1_DM LINE R1 1 417 -4939 1 741 2640 185 15 25 chrUextra 20458162 20458832 -8545824 - SAR_DM Satellite Satellite -361 1111 449 1 741 526 54 0 0 chrUextra 20458932 20459024 -8545632 + FW_DM LINE Jockey 4601 4692 0 1 741 4597 33 2 2 chrUextra 20459026 20459609 -8545047 - R1_DM LINE R1 -3966 1390 808 1 741 4707 2 0 0 chrUextra 20459709 20460257 -8544399 - QUASIMODO_LTR LTR Gypsy -110 548 1 1 741 5780 18 0 0 chrUextra 20460486 20461163 -8543493 - DIVER_I LTR Pao -385 5258 4582 1 741 5902 1 1 0 chrUextra 20461263 20461940 -8542716 + LSU-rRNA_Dme rRNA rRNA 2066 2743 -1157 1 741 323 229 9 54 chrUextra 20462051 20462162 -8542494 - XDMR_DM Unknown Unknown -249 111 6 1 741 3001 177 8 5 chrUextra 20462065 20462717 -8541939 + SAR_DM Satellite Satellite 224 877 -595 1 741 1817 4 17 17 chrUextra 20462817 20463057 -8541599 - NTS_DM Other Other 0 240 1 1 741 1831 0 17 17 chrUextra 20463057 20463297 -8541359 - NTS_DM Other Other 0 240 1 1 741 1428 5 30 15 chrUextra 20463297 20463494 -8541162 - NTS_DM Other Other 0 240 41 1 741 4644 0 56 0 chrUextra 20463594 20464152 -8540504 - QUASIMODO_LTR LTR Gypsy -68 590 2 1 741 422 88 15 0 chrUextra 20464152 20464220 -8540436 + (TA)n Simple_repeat Simple_repeat 2 70 0 1 741 5277 0 25 6 chrUextra 20464371 20465047 -8539609 + MAX_I LTR Pao 720 1408 -6506 1 741 5608 22 0 0 chrUextra 20465147 20465823 -8538833 - FW_DM LINE Jockey -685 4007 3332 1 741 5880 1 0 0 chrUextra 20465923 20466599 -8538057 - FW_DM LINE Jockey -575 4117 3442 1 741 2839 168 14 11 chrUextra 20466701 20467356 -8537300 - SAR_DM Satellite Satellite -587 885 229 1 741 503 80 0 0 chrUextra 20467300 20467375 -8537281 + ARS406_DM Unknown Unknown 1 75 -278 1 741 2878 187 16 6 chrUextra 20467475 20468149 -8536507 - SAR_DM Satellite Satellite -558 914 234 1 741 44 0 0 0 chrUextra 20468649 20468693 -8535963 + AT_rich Low_complexity Low_complexity 1 44 0 1 741 2011 190 104 43 chrUextra 20469028 20469703 -8534953 + SAR_DM Satellite Satellite 514 1229 -243 1 741 5809 4 0 0 chrUextra 20469803 20470479 -8534177 - FW_DM LINE Jockey -1033 3659 2984 1 741 2961 173 9 9 chrUextra 20470580 20471245 -8533411 + SAR_DM Satellite Satellite 412 1076 -396 1 741 2681 189 18 26 chrUextra 20471355 20472031 -8532625 - SAR_DM Satellite Satellite -658 670 1 1 741 666 72 10 0 chrUextra 20472131 20472228 -8532428 - R1_DM LINE R1 -5258 98 1 1 741 4582 18 2 0 chrUextra 20472261 20472807 -8531849 - R1_DM LINE R1 0 5356 4810 1 741 2361 154 12 3 chrUextra 20472907 20473571 -8531085 - SAR_DM Satellite Satellite -676 669 1 1 741 34 24 0 0 chrUextra 20473834 20473875 -8530781 + AT_rich Low_complexity Low_complexity 1 41 0 1 741 5867 1 0 1 chrUextra 20474459 20475135 -8529521 + LSU-rRNA_Dme rRNA rRNA 1868 2542 -1358 1 741 5797 1 0 1 chrUextra 20475235 20475911 -8528745 - R1_DM LINE R1 -1649 3707 3033 1 741 5807 3 0 0 chrUextra 20476011 20476687 -8527969 - R1_DM LINE R1 -1615 3741 3066 1 741 5057 34 11 1 chrUextra 20476816 20477463 -8527193 + Gypsy6_I LTR Gypsy 318 970 -6042 1 741 5235 33 41 6 chrUextra 20477563 20478239 -8526417 + FW_DM LINE Jockey 1892 2591 -2101 1 741 5917 1 0 0 chrUextra 20478339 20479015 -8525641 + LSU-rRNA_Dme rRNA rRNA 2668 3343 -557 1 741 1681 72 11 40 chrUextra 20479118 20479391 -8525265 - HETA LINE telomeric -3923 2158 1894 1 741 1186 66 0 0 chrUextra 20479390 20479556 -8525100 - HETA LINE telomeric -4524 1557 1392 1 741 1622 76 4 0 chrUextra 20479553 20479790 -8524866 - HETA LINE telomeric -9 6072 5835 1 741 1240 0 13 0 chrUextra 20479891 20480042 -8524614 + IDEFIX_I LTR Gypsy 39 191 -5437 1 741 39 50 0 0 chrUextra 20480371 20480431 -8524225 + AT_rich Low_complexity Low_complexity 1 60 0 1 741 610 116 0 18 chrUextra 20480667 20480781 -8523875 - ARS406_DM Unknown Unknown -241 112 1 1 741 2608 182 14 15 chrUextra 20480686 20481343 -8523313 + SAR_DM Satellite Satellite 195 850 -622 1 741 525 32 0 0 chrUextra 20481451 20481514 -8523142 + (TTCTC)n Simple_repeat Simple_repeat 3 65 0 1 741 1873 78 78 3 chrUextra 20482224 20482506 -8522150 - MDG1_LTR LTR Gypsy -46 396 94 1 741 351 105 0 0 chrUextra 20482508 20482565 -8522091 + (TTA)n Simple_repeat Simple_repeat 3 59 0 1 741 402 56 0 0 chrUextra 20482580 20482634 -8522022 + DOC5_DM LINE Jockey 3926 3979 -703 1 741 1772 23 71 11 chrUextra 20482629 20482895 -8521761 + DOC5_DM LINE Jockey 4180 4461 -221 1 741 3208 156 9 9 chrUextra 20483010 20483671 -8520985 + SAR_DM Satellite Satellite 369 1029 -443 1 741 810 20 0 0 chrUextra 20483773 20483871 -8520785 - DM176_I LTR Gypsy -6322 98 1 1 741 2020 20 16 0 chrUextra 20483871 20484124 -8520532 - DM176_LTR LTR Gypsy 0 507 251 1 741 2139 14 0 79 chrUextra 20484125 20484430 -8520226 - DM176_LTR LTR Gypsy -224 283 3 1 741 4518 53 3 53 chrUextra 20484547 20485223 -8519433 - BATUMI_I LTR Pao -5058 2905 2264 1 741 5189 49 1 3 chrUextra 20485327 20485999 -8518657 + R1_DM LINE R1 1044 1714 -3642 1 741 5602 27 1 0 chrUextra 20486099 20486775 -8517881 + DIVER_I LTR Pao 2042 2718 -2925 1 741 2858 190 18 18 chrUextra 20486879 20487545 -8517111 - SAR_DM Satellite Satellite -593 666 1 1 741 3015 169 12 9 chrUextra 20487651 20488325 -8516331 - SAR_DM Satellite Satellite -455 1017 342 1 741 1744 72 12 0 chrUextra 20488427 20488678 -8515978 - R1_DM LINE R1 -5102 254 1 1 741 954 26 0 0 chrUextra 20488711 20488825 -8515831 - R1_DM LINE R1 0 5356 5243 1 741 2256 14 4 4 chrUextra 20488822 20489100 -8515556 - R1_DM LINE R1 -290 5066 4789 1 741 1616 52 0 0 chrUextra 20489666 20489877 -8514779 + PROTOP DNA P 74 284 -4196 1 741 34 24 0 0 chrUextra 20490138 20490179 -8514477 + AT_rich Low_complexity Low_complexity 1 41 0 1 741 1625 0 0 0 chrUextra 20490468 20490655 -8514001 + LSU-rRNA_Dme rRNA rRNA 1 187 -3713 1 741 5596 19 0 0 chrUextra 20490755 20491431 -8513225 + R2_DM LINE R2 320 995 -2612 1 741 5664 6 1 1 chrUextra 20491531 20492207 -8512449 - R1_DM LINE R1 -1325 4031 3356 1 741 5807 3 0 0 chrUextra 20492307 20492983 -8511673 - Invader3_I LTR Gypsy -1309 3579 2904 1 741 22 88 0 0 chrUextra 20493106 20493163 -8511493 + AT_rich Low_complexity Low_complexity 1 57 0 1 741 2812 182 9 8 chrUextra 20493859 20494517 -8510139 + SAR_DM Satellite Satellite 418 1076 -396 1 741 951 0 0 0 chrUextra 20494635 20494746 -8509910 - LSU-rRNA_Dme rRNA rRNA -3789 111 1 1 741 21 95 0 0 chrUextra 20494758 20494821 -8509835 + AT_rich Low_complexity Low_complexity 1 63 0 1 741 34 24 0 0 chrUextra 20495034 20495075 -8509581 + AT_rich Low_complexity Low_complexity 1 41 0 1 741 1467 42 0 0 chrUextra 20495771 20496083 -8508573 + (TTCTC)n Simple_repeat Simple_repeat 1 312 0 1 741 5431 3 13 0 chrUextra 20496187 20496863 -8507793 - DM176_I LTR Gypsy -387 6033 5349 1 741 946 82 9 19 chrUextra 20496963 20497639 -8507017 + RSP Satellite Satellite 1 669 0 1 741 5396 3 0 0 chrUextra 20497793 20498415 -8506241 + LSU-rRNA_Dme rRNA rRNA 1788 2409 -1491 1 741 4661 2 0 44 chrUextra 20498518 20499113 -8505543 - LSU-rRNA_Dme rRNA rRNA -3331 569 1 1 741 21 95 0 0 chrUextra 20499125 20499188 -8505468 + AT_rich Low_complexity Low_complexity 1 63 0 1 741 4385 20 0 0 chrUextra 20499291 20499830 -8504826 - IDEFIX_I LTR Gypsy -3187 2441 1903 1 741 1099 22 0 0 chrUextra 20499828 20499967 -8504689 - IDEFIX_I LTR Gypsy -5359 269 131 1 741 2760 185 6 13 chrUextra 20500067 20500743 -8503913 + SAR_DM Satellite Satellite 1 671 -417 1 741 459 73 0 0 chrUextra 20501451 20501519 -8503137 - IDEFIX_I LTR Gypsy -1793 3835 3768 1 741 1328 23 0 6 chrUextra 20501619 20501792 -8502864 - NTS_DM Other Other -68 172 1 1 741 1408 20 20 20 chrUextra 20501792 20501995 -8502661 - NTS_DM Other Other 0 240 38 1 741 789 28 9 27 chrUextra 20501995 20502106 -8502550 - NTS_DM Other Other -107 133 25 1 741 21 57 0 0 chrUextra 20502132 20502167 -8502489 + AT_rich Low_complexity Low_complexity 1 35 0 1 741 863 31 0 8 chrUextra 20502167 20502295 -8502361 - NTS_DM Other Other -39 201 75 1 741 2832 179 15 9 chrUextra 20503171 20503847 -8500809 + SAR_DM Satellite Satellite 297 976 -496 1 741 5740 1 0 0 chrUextra 20503947 20504623 -8500033 - ROO_I LTR Pao -5094 3162 2487 1 741 4915 60 5 9 chrUextra 20504725 20505399 -8499257 - CIRCE LINE Composite -3702 2654 1984 1 741 289 104 0 0 chrUextra 20505499 20505547 -8499109 - ARS406_DM Unknown Unknown -305 48 1 1 741 2899 174 12 9 chrUextra 20505507 20506175 -8498481 + SAR_DM Satellite Satellite 246 915 -557 1 741 5842 0 0 0 chrUextra 20506275 20506951 -8497705 + R1_DM LINE R1 2343 3018 -2338 1 741 4799 27 0 0 chrUextra 20507054 20507649 -8497007 + FW_DM LINE Jockey 4095 4689 -3 1 741 673 37 0 0 chrUextra 20507645 20507727 -8496929 - ROO_I LTR Pao -4051 4205 4124 1 741 2525 23 3 0 chrUextra 20507827 20508134 -8496522 + R1_DM LINE R1 5049 5356 0 1 741 2346 69 6 9 chrUextra 20508167 20508503 -8496153 + R1_DM LINE R1 1 335 -5021 1 741 1221 175 7 0 chrUextra 20508603 20508877 -8495779 - ROVER-I_DM LTR Gypsy -319 6265 5990 1 741 1646 156 44 41 chrUextra 20508912 20509279 -8495377 - ROVER-I_DM LTR Gypsy -1276 5308 4941 1 741 1526 6 0 0 chrUextra 20509379 20509555 -8495101 - Gypsy2_LTR LTR Gypsy -177 176 1 1 741 2277 61 3 23 chrUextra 20509557 20510055 -8494601 - Gypsy2_I LTR Gypsy -1 6176 5679 1 741 5780 0 0 1 chrUextra 20510155 20510831 -8493825 + ROO_I LTR Pao 1882 2556 -5700 1 741 21 89 0 0 chrUextra 20511369 20511425 -8493231 + AT_rich Low_complexity Low_complexity 1 56 0 1 741 1391 0 0 6 chrUextra 20511444 20511607 -8493049 - SSU-rRNA_Dme rRNA rRNA 0 1995 1834 1 741 2909 145 103 4 chrUextra 20511707 20512383 -8492273 + TART_B1 LINE telomeric 882 1624 -9030 1 741 2880 182 9 16 chrUextra 20512484 20513159 -8491497 - SAR_DM Satellite Satellite -369 1103 434 1 741 679 0 0 12 chrUextra 20513259 20513342 -8491314 - LSU-rRNA_Dme rRNA rRNA -1908 1992 1911 1 741 2879 3 0 0 chrUextra 20513342 20513672 -8490984 - TRANSPAC_LTR LTR Gypsy 0 330 1 1 741 2106 8 0 0 chrUextra 20513671 20513935 -8490721 - TRANSPAC_I LTR Gypsy 0 4590 4327 1 741 5233 21 28 0 chrUextra 20514035 20514711 -8489945 - Gypsy4_I LTR Gypsy -915 5373 4679 1 741 5672 10 3 1 chrUextra 20514811 20515487 -8489169 + DOC2_DM LINE Jockey 2004 2680 -2113 1 741 3387 56 79 0 chrUextra 20515587 20516263 -8488393 - PROTOP_A DNA P -9 1096 502 1 741 207 0 0 0 chrUextra 20516420 20516443 -8488213 + (T)n Simple_repeat Simple_repeat 1 23 0 1 741 259 278 10 0 chrUextra 20516468 20516565 -8488091 + MAX_I LTR Pao 1066 1163 -6751 1 741 798 154 89 164 chrUextra 20516566 20517016 -8487640 + MAX_I LTR Pao 939 1354 -6560 1 741 548 13 26 0 chrUextra 20517139 20517216 -8487440 + NTS_DM Other Other 55 133 -107 1 741 797 10 0 0 chrUextra 20517216 20517312 -8487344 + NTS_DM Other Other 38 133 -107 1 741 1408 20 20 20 chrUextra 20517312 20517515 -8487141 + NTS_DM Other Other 38 240 0 1 741 1734 21 17 17 chrUextra 20517515 20517755 -8486901 + NTS_DM Other Other 1 240 0 1 741 452 17 33 0 chrUextra 20517755 20517815 -8486841 + NTS_DM Other Other 1 62 -178 1 741 364 41 0 0 chrUextra 20517915 20517964 -8486692 - ARS406_DM Unknown Unknown -215 138 90 1 741 1698 189 13 10 chrUextra 20517969 20518379 -8486277 + SAR_DM Satellite Satellite 1 551 -642 1 741 1010 94 0 0 chrUextra 20518379 20518538 -8486118 - ARS406_DM Unknown Unknown -194 159 1 1 741 1698 189 13 10 chrUextra 20518538 20518591 -8486065 + SAR_DM Satellite Satellite 552 624 -569 1 741 2937 165 14 9 chrUextra 20518691 20519351 -8485305 - SAR_DM Satellite Satellite -484 988 326 1 741 997 183 27 9 chrUextra 20519470 20520143 -8484513 - SAR_DM Satellite Satellite -730 684 1 1 741 21 89 0 0 chrUextra 20520280 20520336 -8484320 + AT_rich Low_complexity Low_complexity 1 56 0 1 741 4901 0 2 2 chrUextra 20520355 20520919 -8483737 - SSU-rRNA_Dme rRNA rRNA 0 1995 1432 1 741 2008 61 19 244 chrUextra 20521019 20521695 -8482961 + BATUMI_I LTR Pao 481 1004 -6959 1 741 5739 1 0 3 chrUextra 20521795 20522471 -8482185 - ROO_I LTR Pao -6533 1723 1050 1 741 2914 169 12 12 chrUextra 20522571 20523246 -8481410 + SAR_DM Satellite Satellite 284 958 -514 1 741 5725 4 1 0 chrUextra 20523347 20524023 -8480633 + DMRT1B LINE R1 4355 5031 -152 1 741 5468 18 1 3 chrUextra 20524123 20524797 -8479859 + R1_DM LINE R1 3411 4083 -1273 1 741 5548 25 0 0 chrUextra 20524899 20525575 -8479081 - R1_DM LINE R1 -2711 2645 1970 1 741 1858 210 98 40 chrUextra 20525675 20526351 -8478305 - Gypsy12_LTR LTR Gypsy -324 2012 1298 1 741 2652 185 22 24 chrUextra 20526451 20527125 -8477531 + SAR_DM Satellite Satellite 434 1106 -366 1 741 2835 0 0 0 chrUextra 20527228 20527549 -8477107 - LSU-rRNA_Dme rRNA rRNA -1792 2108 1788 1 741 2546 0 7 7 chrUextra 20527593 20527903 -8476753 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1479 1 741 512 77 0 37 chrUextra 20528011 20528119 -8476537 + (ACATG)n Simple_repeat Simple_repeat 3 106 0 1 741 5064 2 3 70 chrUextra 20528779 20529455 -8475201 - LSU-rRNA_Dme rRNA rRNA -1672 2228 1598 1 741 5668 10 0 0 chrUextra 20529556 20530231 -8474425 - STALKER4_I LTR Gypsy -659 5871 5197 1 741 2716 134 27 105 chrUextra 20530331 20531006 -8473650 + Gypsy12A_LTR LTR Gypsy 1636 2257 -23 1 741 5523 25 0 0 chrUextra 20531107 20531782 -8472874 + R1_DM LINE R1 2196 2870 -2486 1 741 5782 4 1 0 chrUextra 20531883 20532559 -8472097 + R1_DM LINE R1 4542 5218 -138 1 741 1326 80 0 5 chrUextra 20532663 20532851 -8471805 + Gypsy12_I LTR Gypsy 790 976 -4570 1 741 407 273 0 0 chrUextra 20532858 20532980 -8471676 + DM297_I LTR Gypsy 3337 3458 -2709 1 741 1386 195 44 29 chrUextra 20532980 20533323 -8471333 + Gypsy12_LTR LTR Gypsy 1 348 -1988 1 741 2839 3 0 0 chrUextra 20533541 20533867 -8470789 + SSU-rRNA_Dme rRNA rRNA 1 326 -1669 1 741 2121 0 0 0 chrUextra 20533863 20534110 -8470546 + LSU-rRNA_Dme rRNA rRNA 661 907 -2993 1 741 2543 204 9 6 chrUextra 20534211 20534861 -8469795 - SAR_DM Satellite Satellite -597 875 224 1 741 407 133 0 0 chrUextra 20534799 20534874 -8469782 + ARS406_DM Unknown Unknown 1 75 -278 1 741 5757 6 0 0 chrUextra 20534990 20535663 -8468993 - R1_DM LINE R1 -337 5019 4347 1 741 1497 6 0 0 chrUextra 20535763 20535936 -8468720 - LSU-rRNA_Dme rRNA rRNA -1088 2812 2640 1 741 2728 9 0 0 chrUextra 20535934 20536252 -8468404 - R1_DM LINE R1 0 5356 5039 1 741 1609 5 0 0 chrUextra 20536254 20536439 -8468217 - LSU-rRNA_Dme rRNA rRNA -1251 2649 2465 1 741 2542 20 3 0 chrUextra 20536539 20536845 -8467811 - DM176_I LTR Gypsy -6113 307 1 1 741 3131 8 0 0 chrUextra 20536845 20537215 -8467441 - DM176_LTR LTR Gypsy 0 507 138 1 741 2381 84 28 18 chrUextra 20537315 20537991 -8466665 - DMSAT6 Satellite Satellite -71 682 1 1 741 803 0 0 0 chrUextra 20538091 20538185 -8466471 - NTS_DM Other Other -109 131 38 1 741 847 18 0 27 chrUextra 20538185 20538297 -8466359 - NTS_DM Other Other -107 133 25 1 741 1252 18 0 6 chrUextra 20538349 20538514 -8466142 - NTS_DM Other Other -39 201 38 1 741 870 9 0 27 chrUextra 20538514 20538626 -8466030 - NTS_DM Other Other -107 133 25 1 741 562 34 0 11 chrUextra 20538678 20538767 -8465889 - NTS_DM Other Other -39 201 114 1 741 2703 178 13 25 chrUextra 20538870 20539543 -8465113 - SAR_DM Satellite Satellite -361 1111 447 1 741 5394 12 4 0 chrUextra 20539643 20540319 -8464337 + IDEFIX_I LTR Gypsy 4433 5111 -517 1 741 2351 112 31 23 chrUextra 20541195 20541841 -8462815 + DMSAT6 Satellite Satellite 1 651 -236 1 741 2755 185 7 19 chrUextra 20541971 20542645 -8462011 + SAR_DM Satellite Satellite 446 1111 -361 1 741 22 94 0 0 chrUextra 20542755 20542819 -8461837 + AT_rich Low_complexity Low_complexity 1 64 0 1 741 4694 0 0 42 chrUextra 20542831 20543423 -8461233 + LSU-rRNA_Dme rRNA rRNA 1 567 -3333 1 741 1734 21 17 17 chrUextra 20543552 20543792 -8460864 + NTS_DM Other Other 1 240 0 1 741 1737 13 17 21 chrUextra 20543792 20544033 -8460623 + NTS_DM Other Other 1 240 0 1 741 1221 30 0 12 chrUextra 20544033 20544199 -8460457 + NTS_DM Other Other 1 164 -76 1 741 4950 33 55 12 chrUextra 20544299 20544975 -8459681 + DOC3_DM LINE Jockey 3114 3818 -922 1 741 5908 0 1 0 chrUextra 20545075 20545751 -8458905 + LSU-rRNA_Dme rRNA rRNA 2677 3353 -547 1 741 1756 17 17 17 chrUextra 20545891 20546131 -8458525 + NTS_DM Other Other 1 240 0 1 741 1770 13 17 17 chrUextra 20546131 20546371 -8458285 + NTS_DM Other Other 1 240 0 1 741 1257 6 0 6 chrUextra 20546371 20546527 -8458129 + NTS_DM Other Other 1 155 -85 1 741 1965 194 31 12 chrUextra 20546627 20547303 -8457353 - SAR_DM Satellite Satellite -1087 688 1 1 741 483 311 8 2 chrUextra 20547793 20547980 -8456676 - Gypsy5_I LTR Gypsy -3597 2912 2671 1 741 267 274 31 31 chrUextra 20547978 20548076 -8456580 - TIRANT_I LTR Gypsy -3996 3696 3599 1 741 610 27 0 0 chrUextra 20548179 20548252 -8456404 - PROTOP_A DNA P -876 229 157 1 741 1568 93 77 240 chrUextra 20548247 20548855 -8455801 + MAX_I LTR Pao 976 1484 -6430 1 741 2528 174 19 33 chrUextra 20549731 20550397 -8454259 - SAR_DM Satellite Satellite -320 1152 496 1 741 5365 30 25 3 chrUextra 20550507 20551183 -8453473 + R1_DM LINE R1 1467 2157 -3199 1 741 713 0 0 0 chrUextra 20551283 20551364 -8453292 - NTS_DM Other Other -159 81 1 1 741 1811 13 17 13 chrUextra 20551364 20551603 -8453053 - NTS_DM Other Other 0 240 1 1 741 1716 25 17 17 chrUextra 20551603 20551843 -8452813 - NTS_DM Other Other 0 240 1 1 741 674 27 35 35 chrUextra 20551843 20551959 -8452697 - NTS_DM Other Other 0 240 125 1 741 2325 99 27 18 chrUextra 20552059 20552735 -8451921 - DMSAT6 Satellite Satellite -111 682 1 1 741 528 16 0 0 chrUextra 20552835 20552896 -8451760 - NTS_DM Other Other -179 61 1 1 741 1847 4 17 13 chrUextra 20552896 20553135 -8451521 - NTS_DM Other Other 0 240 1 1 741 1861 0 17 13 chrUextra 20553135 20553374 -8451282 - NTS_DM Other Other 0 240 1 1 741 934 0 29 22 chrUextra 20553374 20553511 -8451145 - NTS_DM Other Other 0 240 103 1 741 4479 33 2 40 chrUextra 20553611 20554237 -8450419 - PROTOP_A DNA P -503 602 1 1 741 1620 9 0 5 chrUextra 20554390 20554822 -8449834 + (TTCTC)n Simple_repeat Simple_repeat 1 429 0 1 741 195 69 0 0 chrUextra 20554822 20554851 -8449805 + (CAGAG)n Simple_repeat Simple_repeat 4 32 0 1 741 1059 91 0 0 chrUextra 20554851 20555063 -8449593 + (GAGAA)n Simple_repeat Simple_repeat 1 212 0 1 741 5730 3 1 4 chrUextra 20555163 20555839 -8448817 - LSU-rRNA_Dme rRNA rRNA -2495 1405 732 1 741 5833 0 3 1 chrUextra 20555939 20556615 -8448041 + SSU-rRNA_Dme rRNA rRNA 616 1292 -703 1 741 22 88 0 0 chrUextra 20556741 20556798 -8447858 + AT_rich Low_complexity Low_complexity 1 57 0 1 741 23 68 0 0 chrUextra 20556836 20556880 -8447776 + AT_rich Low_complexity Low_complexity 1 44 0 1 741 26 30 0 0 chrUextra 20556926 20556959 -8447697 + AT_rich Low_complexity Low_complexity 1 33 0 1 741 489 33 0 0 chrUextra 20557330 20557391 -8447265 - PROTOP DNA P -1 4479 4418 1 741 3712 2 0 2 chrUextra 20557734 20558163 -8446493 - ROO_LTR LTR Pao 0 428 1 1 741 22 35 0 0 chrUextra 20558491 20558520 -8446136 + AT_rich Low_complexity Low_complexity 1 29 0 1 741 37 39 0 0 chrUextra 20558602 20558653 -8446003 + AT_rich Low_complexity Low_complexity 1 51 0 1 741 5219 40 28 1 chrUextra 20559043 20559719 -8444937 + R1_DM LINE R1 1238 1931 -3425 1 741 5622 1 0 1 chrUextra 20559846 20560495 -8444161 + LSU-rRNA_Dme rRNA rRNA 1788 2435 -1465 1 741 2858 171 13 21 chrUextra 20560595 20561271 -8443385 - SAR_DM Satellite Satellite -594 878 208 1 741 23 33 0 0 chrUextra 20561380 20561410 -8443246 + AT_rich Low_complexity Low_complexity 1 30 0 1 741 4448 28 76 7 chrUextra 20561445 20562047 -8442609 - PROTOP DNA P 0 4480 3837 1 741 2654 189 18 6 chrUextra 20562148 20562799 -8441857 - SAR_DM Satellite Satellite -634 838 180 1 741 760 115 0 0 chrUextra 20562693 20562823 -8441833 + ARS406_DM Unknown Unknown 1 130 -223 1 741 2213 119 25 22 chrUextra 20562923 20563599 -8441057 + DMSAT6 Satellite Satellite 1 677 -245 1 741 2883 180 12 9 chrUextra 20563702 20564375 -8440281 + SAR_DM Satellite Satellite 293 967 -505 1 741 626 200 7 14 chrUextra 20564597 20564739 -8439917 + HETRP_DM Satellite Satellite 1529 1669 -203 1 741 632 193 7 14 chrUextra 20564879 20565021 -8439635 + HETRP_DM Satellite Satellite 1529 1669 -203 1 741 5683 9 0 0 chrUextra 20565251 20565927 -8438729 + STALKER4_I LTR Gypsy 5200 5875 -655 1 741 1756 17 17 17 chrUextra 20566041 20566281 -8438375 - NTS_DM Other Other 0 240 1 1 741 1734 21 17 17 chrUextra 20566281 20566521 -8438135 - NTS_DM Other Other 0 240 1 1 741 1180 22 22 22 chrUextra 20566521 20566703 -8437953 - NTS_DM Other Other 0 240 59 1 741 2477 23 0 7 chrUextra 20566803 20567110 -8437546 - G_DM LINE Jockey -1389 2957 2653 1 741 246 150 0 0 chrUextra 20567160 20567200 -8437456 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 741 1409 20 19 34 chrUextra 20567270 20567479 -8437177 + NTS_DM Other Other 25 230 -10 1 741 1015 14 26 20 chrUextra 20567579 20567730 -8436926 + NTS_DM Other Other 89 240 0 1 741 1817 13 17 13 chrUextra 20567730 20567969 -8436687 + NTS_DM Other Other 1 240 0 1 741 1821 13 17 13 chrUextra 20567969 20568208 -8436448 + NTS_DM Other Other 1 240 0 1 741 335 25 0 0 chrUextra 20568208 20568248 -8436408 + NTS_DM Other Other 1 40 -200 1 741 3472 252 25 20 chrUextra 20568355 20569796 -8434860 + SAR_DM Satellite Satellite 1 1447 -216 1 741 2008 290 4 4 chrUextra 20569907 20570583 -8434073 - ROVER-I_DM LTR Gypsy -4967 1617 942 1 741 5190 15 0 34 chrUextra 20570683 20571359 -8433297 + G_DM LINE Jockey 3480 4132 -214 1 741 5605 19 1 0 chrUextra 20571459 20572135 -8432521 - Gypsy4_I LTR Gypsy -1597 4691 4015 1 741 2864 174 8 9 chrUextra 20572236 20572885 -8431771 - SAR_DM Satellite Satellite -633 839 192 1 741 816 82 0 0 chrUextra 20572789 20572911 -8431745 + ARS406_DM Unknown Unknown 1 122 -231 1 741 931 25 0 8 chrUextra 20573011 20573133 -8431523 - DM297_I LTR Gypsy -6046 121 1 1 741 3360 5 7 7 chrUextra 20573133 20573546 -8431110 - DM297_LTR LTR Gypsy 0 414 2 1 741 509 0 135 0 chrUextra 20573546 20573687 -8430969 + (TA)n Simple_repeat Simple_repeat 1 160 0 1 741 5805 1 0 0 chrUextra 20573787 20574463 -8430193 - DOC LINE Jockey -3071 1654 979 1 741 5624 9 4 3 chrUextra 20574563 20575239 -8429417 - LSU-rRNA_Dme rRNA rRNA -2163 1737 1061 1 741 329 23 0 0 chrUextra 20575339 20575383 -8429273 + NTS_DM Other Other 158 201 -39 1 741 810 9 0 44 chrUextra 20575435 20575549 -8429107 + NTS_DM Other Other 25 133 -107 1 741 1252 18 0 6 chrUextra 20575549 20575714 -8428942 + NTS_DM Other Other 38 201 -39 1 741 21 57 0 0 chrUextra 20575714 20575749 -8428907 + AT_rich Low_complexity Low_complexity 1 35 0 1 741 832 9 9 27 chrUextra 20575775 20575886 -8428770 + NTS_DM Other Other 25 133 -107 1 741 930 16 0 23 chrUextra 20575886 20576015 -8428641 + NTS_DM Other Other 38 163 -77 1 741 5514 25 3 0 chrUextra 20576115 20576791 -8427865 - R1_DM LINE R1 -835 4521 3844 1 741 1892 150 84 16 chrUextra 20576891 20577559 -8427097 + TART LINE telomeric 9116 9642 -4835 1 92 5732 3 1 1 chrUextra 20577667 20578343 -8426313 - R1_DM LINE R1 -1489 3867 3192 1 742 1352 0 6 0 chrUextra 20578444 20578609 -8426047 - NTS_DM Other Other -74 166 1 1 742 1825 8 17 13 chrUextra 20578609 20578848 -8425808 - NTS_DM Other Other 0 240 1 1 742 1769 21 17 13 chrUextra 20578848 20579087 -8425569 - NTS_DM Other Other 0 240 1 1 742 5779 6 0 0 chrUextra 20579995 20580671 -8423985 + R1_DM LINE R1 2047 2722 -2634 1 742 1655 30 17 17 chrUextra 20580771 20581007 -8423649 - NTS_DM Other Other -4 236 1 1 742 1709 25 17 17 chrUextra 20581007 20581247 -8423409 - NTS_DM Other Other 0 240 1 1 742 1375 20 20 20 chrUextra 20581248 20581447 -8423209 - NTS_DM Other Other -1 239 41 1 742 5409 4 0 4 chrUextra 20581547 20582223 -8422433 + STALKER4_I LTR Gypsy 5696 6368 -162 1 742 1143 187 0 0 chrUextra 20582403 20582601 -8422055 - Gypsy_I LTR Gypsy -5201 1306 1109 1 742 3226 30 0 0 chrUextra 20582595 20582999 -8421657 + DMCR1A LINE CR1 3914 4317 -153 1 742 28 48 0 0 chrUextra 20583236 20583278 -8421378 + AT_rich Low_complexity Low_complexity 1 42 0 1 742 32 0 0 0 chrUextra 20583606 20583638 -8421018 + AT_rich Low_complexity Low_complexity 1 32 0 1 742 5425 21 0 0 chrUextra 20583876 20584551 -8420105 + STALKER4_I LTR Gypsy 2622 3296 -3234 1 742 2110 156 33 11 chrUextra 20584651 20585104 -8419552 + SAR_DM Satellite Satellite 382 844 -628 1 742 239 75 75 0 chrUextra 20585075 20585115 -8419541 - ARS406_DM Unknown Unknown -164 189 147 1 742 833 206 5 0 chrUextra 20585128 20585327 -8419329 + SAR_DM Satellite Satellite 550 749 -723 1 742 332 101 114 0 chrUextra 20585430 20585509 -8419147 - Stalker2_I LTR Gypsy -7073 329 242 1 742 276 73 0 0 chrUextra 20585707 20585748 -8418908 - Stalker2_I LTR Gypsy -7361 41 1 1 742 2577 18 66 3 chrUextra 20585748 20585896 -8418760 - Stalker3_LTR LTR Gypsy 0 372 225 1 742 207 0 0 0 chrUextra 20585896 20585919 -8418737 + (CTTAT)n Simple_repeat Simple_repeat 2 24 0 1 742 2577 18 66 3 chrUextra 20585919 20586103 -8418553 - Stalker3_LTR LTR Gypsy -148 224 20 1 742 589 0 0 14 chrUextra 20586203 20586276 -8418380 - LSU-rRNA_Dme rRNA rRNA -3828 72 1 1 742 21 95 0 0 chrUextra 20586288 20586351 -8418305 + AT_rich Low_complexity Low_complexity 1 63 0 1 742 34 24 0 0 chrUextra 20586564 20586605 -8418051 + AT_rich Low_complexity Low_complexity 1 41 0 1 742 2571 202 14 23 chrUextra 20586979 20587652 -8417004 + SAR_DM Satellite Satellite 1 667 -227 1 742 1649 12 238 0 chrUextra 20587755 20587982 -8416674 - R1_DM LINE R1 -4864 492 212 1 742 3932 2 0 0 chrUextra 20587980 20588431 -8416225 - LSU-rRNA_Dme rRNA rRNA -1249 2651 2201 1 742 4091 2 0 0 chrUextra 20588531 20588996 -8415660 - SSU-rRNA_Dme rRNA rRNA -1530 465 1 1 742 32 0 0 0 chrUextra 20589128 20589160 -8415496 + AT_rich Low_complexity Low_complexity 1 32 0 1 742 5260 21 1 0 chrUextra 20589307 20589983 -8414673 + STALKER4_I LTR Gypsy 5714 6390 -140 1 742 5655 9 1 1 chrUextra 20590083 20590758 -8413898 + R1_DM LINE R1 3780 4454 -902 1 742 2535 187 11 23 chrUextra 20591633 20592295 -8412361 + SAR_DM Satellite Satellite 466 1119 -353 1 742 4124 4 0 0 chrUextra 20592408 20592885 -8411771 - LSU-rRNA_Dme rRNA rRNA -784 3116 2640 1 742 1758 0 0 0 chrUextra 20592883 20593083 -8411573 - R1_DM LINE R1 0 5356 5157 1 742 5291 6 16 16 chrUextra 20593183 20593858 -8410798 + MDG1_I LTR Gypsy 466 1140 -5456 1 742 1490 267 17 15 chrUextra 20593979 20594633 -8410023 - QUASIMODO_I LTR Gypsy -641 5419 4765 1 742 5677 7 0 0 chrUextra 20595511 20596183 -8408473 + Invader2_I LTR Gypsy 480 1151 -3441 1 742 5703 3 1 1 chrUextra 20596283 20596958 -8407698 + R1_DM LINE R1 1006 1680 -3676 1 742 3837 67 186 2 chrUextra 20597058 20597733 -8406923 + Gypsy6_I LTR Gypsy 1832 3008 -4004 1 742 4688 24 38 0 chrUextra 20597833 20598414 -8406242 + DMCR1A LINE CR1 1239 1841 -2629 1 742 246 0 0 0 chrUextra 20598415 20598444 -8406212 + DMCR1A LINE CR1 2217 2245 -2225 1 742 456 46 0 0 chrUextra 20598443 20598508 -8406148 + DMCR1A LINE CR1 1396 1460 -3010 1 742 2561 188 12 23 chrUextra 20598608 20599273 -8405383 + SAR_DM Satellite Satellite 461 1118 -354 1 742 291 185 0 0 chrUextra 20599218 20599283 -8405373 - XDMR Unknown Unknown 0 361 297 1 742 1116 0 0 0 chrUextra 20599383 20599513 -8405143 - FW_DM LINE Jockey -4544 148 19 1 742 4625 104 5 0 chrUextra 20600160 20600833 -8403823 + Gypsy12_I LTR Gypsy 3895 4570 -976 1 742 5657 0 0 0 chrUextra 20600933 20601608 -8403048 + DM176_I LTR Gypsy 4391 5065 -1355 1 742 335 223 10 21 chrUextra 20602484 20602580 -8402076 + HETRP_DM Satellite Satellite 1570 1664 -208 1 742 681 179 7 14 chrUextra 20602747 20602889 -8401767 + HETRP_DM Satellite Satellite 1529 1669 -203 1 742 390 21 0 0 chrUextra 20603019 20603066 -8401590 + (GA)n Simple_repeat Simple_repeat 2 48 0 1 742 339 258 0 0 chrUextra 20603066 20603155 -8401501 + HETRP_DM Satellite Satellite 1549 1637 -235 1 742 5776 1 3 3 chrUextra 20603258 20603933 -8400723 - SSU-rRNA_Dme rRNA rRNA -9 1986 1312 1 742 2488 81 11 30 chrUextra 20604033 20604692 -8399964 - DMSAT6 Satellite Satellite -399 646 1 1 742 1502 10 0 7 chrUextra 20604808 20605116 -8399540 + (TAGA)n Simple_repeat Simple_repeat 1 305 0 1 742 696 129 0 0 chrUextra 20605124 20605271 -8399385 + (ATCG)n Simple_repeat Simple_repeat 3 149 0 1 742 1104 91 0 0 chrUextra 20605271 20605483 -8399173 + (TAGA)n Simple_repeat Simple_repeat 1 212 0 1 742 2575 180 19 30 chrUextra 20605583 20606254 -8398402 + SAR_DM Satellite Satellite 496 1159 -313 1 742 5573 15 22 0 chrUextra 20606358 20607033 -8397623 - FW_DM LINE Jockey -2067 2625 1936 1 742 2903 164 19 11 chrUextra 20607160 20607807 -8396849 - SAR_DM Satellite Satellite -396 1076 425 1 742 5627 22 0 0 chrUextra 20608683 20609358 -8395298 - R1_DM LINE R1 -1561 3795 3121 1 742 2443 92 9 36 chrUextra 20609458 20610133 -8394523 + DMSAT6 Satellite Satellite 1 656 -64 1 742 342 0 0 0 chrUextra 20610870 20610908 -8393748 + (TCTTG)n Simple_repeat Simple_repeat 1 38 0 1 742 2242 106 9 38 chrUextra 20611008 20611645 -8393011 + DMSAT6 Satellite Satellite 1 618 -6 1 742 2891 180 9 10 chrUextra 20611783 20612458 -8392198 - SAR_DM Satellite Satellite -515 957 284 1 742 1621 73 9 0 chrUextra 20612558 20612790 -8391866 - R1_DM LINE R1 -5122 234 1 1 742 3312 29 0 5 chrUextra 20612823 20613233 -8391423 - R1_DM LINE R1 0 5356 4949 1 742 1955 178 5 7 chrUextra 20613333 20613762 -8390894 - SAR_DM Satellite Satellite -549 923 496 1 742 963 132 54 33 chrUextra 20613776 20614008 -8390648 - SAR_DM Satellite Satellite -928 544 332 1 742 5455 22 7 0 chrUextra 20614108 20614783 -8389873 - FW_DM LINE Jockey -1225 3467 2788 1 742 5508 18 22 0 chrUextra 20614883 20615558 -8389098 + ACCORD2_I LTR Gypsy 213 902 -6310 1 742 1015 0 0 8 chrUextra 20615658 20615778 -8388878 - ROO_I LTR Pao -8137 119 1 1 742 3766 0 0 0 chrUextra 20615778 20616206 -8388450 - ROO_LTR LTR Pao 0 428 1 1 742 847 40 198 8 chrUextra 20616207 20616333 -8388323 + QUASIMODO_I LTR Gypsy 4563 4712 -1348 1 742 245 133 0 0 chrUextra 20616433 20616478 -8388178 - ARS406_DM Unknown Unknown -308 45 1 1 742 3045 170 6 8 chrUextra 20616438 20617096 -8387560 + SAR_DM Satellite Satellite 246 902 -570 1 742 747 50 0 0 chrUextra 20617007 20617108 -8387548 - ARS406_DM Unknown Unknown -164 189 89 1 742 1750 68 0 0 chrUextra 20617208 20617442 -8387214 + R1_DM LINE R1 1157 1390 -3966 1 742 3550 27 0 0 chrUextra 20617443 20617883 -8386773 - FW_DM LINE Jockey -4 4688 4249 1 742 2906 175 12 10 chrUextra 20617983 20618658 -8385998 - SAR_DM Satellite Satellite -496 976 301 1 742 5128 7 49 6 chrUextra 20618758 20619433 -8385223 + FB4_DM DNA Tc1 3280 3983 -106 1 742 21 89 0 0 chrUextra 20620411 20620467 -8384189 + AT_rich Low_complexity Low_complexity 1 56 0 1 742 22 88 0 0 chrUextra 20620507 20620564 -8384092 + AT_rich Low_complexity Low_complexity 1 57 0 1 742 26 30 0 0 chrUextra 20620604 20620637 -8384019 + AT_rich Low_complexity Low_complexity 1 33 0 1 742 5849 0 0 1 chrUextra 20621083 20621758 -8382898 + DOC LINE Jockey 3143 3816 -909 1 742 976 0 0 0 chrUextra 20621858 20621969 -8382687 + NOMAD_LTR LTR Gypsy 408 518 0 1 742 4900 0 5 0 chrUextra 20621969 20622533 -8382123 + NOMAD_I LTR Gypsy 1 567 -6005 1 742 2983 176 6 8 chrUextra 20622635 20623288 -8381368 + SAR_DM Satellite Satellite 425 1076 -396 1 742 5508 10 0 0 chrUextra 20623408 20624083 -8380573 - IDEFIX_I LTR Gypsy -599 5029 4355 1 742 1146 15 0 0 chrUextra 20624386 20624521 -8380135 + 5S_DM RNA RNA 1 135 0 1 742 835 0 0 0 chrUextra 20624762 20624858 -8379798 + 5S_DM RNA RNA 1 96 -39 1 742 2343 84 6 28 chrUextra 20626508 20627179 -8377477 + DMSAT6 Satellite Satellite 1 655 -74 1 742 2947 176 6 11 chrUextra 20627286 20627952 -8376704 - SAR_DM Satellite Satellite -615 857 195 1 742 5581 10 0 0 chrUextra 20628833 20629508 -8375148 - R1_DM LINE R1 -4393 963 289 1 742 2293 166 16 6 chrUextra 20630383 20630873 -8373783 + SAR_DM Satellite Satellite 409 903 -569 1 742 1026 89 0 0 chrUextra 20630880 20631038 -8373618 - ARS406_DM Unknown Unknown -195 158 1 1 742 777 167 6 12 chrUextra 20630888 20631058 -8373598 + SAR_DM Satellite Satellite 496 664 -808 1 742 2866 169 11 14 chrUextra 20631158 20631817 -8372839 - SAR_DM Satellite Satellite -490 982 326 1 742 5891 0 1 1 chrUextra 20631933 20632608 -8372048 + LSU-rRNA_Dme rRNA rRNA 2945 3619 -281 1 742 3331 274 38 16 chrUextra 20632708 20634141 -8370515 + SAR_DM Satellite Satellite 1 1465 -208 1 742 2748 172 33 15 chrUextra 20634266 20634933 -8369723 - SAR_DM Satellite Satellite -417 1055 377 1 742 1444 69 0 0 chrUextra 20635033 20635236 -8369420 + MDG1_I LTR Gypsy 932 1134 -5462 1 742 1890 57 90 2 chrUextra 20635308 20635706 -8368950 + MDG1_I LTR Gypsy 1135 1567 -5029 1 742 5768 7 0 0 chrUextra 20635808 20636483 -8368173 + Gypsy4_I LTR Gypsy 1062 1736 -4552 1 742 2404 57 3 0 chrUextra 20636583 20636918 -8367738 - XDMR Unknown Unknown -25 336 1 1 742 2427 62 3 0 chrUextra 20636918 20637258 -8367398 - XDMR Unknown Unknown 0 361 21 1 742 5609 8 0 1 chrUextra 20637358 20638021 -8366635 + DMRT1B LINE R1 1929 2590 -2593 1 742 3038 176 9 7 chrUextra 20638133 20638808 -8365848 - SAR_DM Satellite Satellite -542 930 255 1 742 4255 82 113 12 chrUextra 20638908 20639563 -8365093 - Gypsy12_I LTR Gypsy -361 5185 4465 1 742 4571 49 2 2 chrUextra 20640458 20641055 -8363601 + R1_DM LINE R1 797 1393 -3963 1 742 474 26 0 0 chrUextra 20641055 20641133 -8363523 - FW_DM LINE Jockey 0 4692 4615 1 742 239 154 0 0 chrUextra 20641233 20641272 -8363384 - LSU-rRNA_Dme rRNA rRNA -1281 2619 2581 1 742 22 56 0 0 chrUextra 20641277 20641313 -8363343 + AT_rich Low_complexity Low_complexity 1 36 0 1 742 4532 0 2 2 chrUextra 20641386 20641908 -8362748 - LSU-rRNA_Dme rRNA rRNA 0 3900 3379 1 742 1663 10 0 0 chrUextra 20642008 20642210 -8362446 + DOC2_DM LINE Jockey 4592 4793 0 1 742 1892 193 11 7 chrUextra 20642218 20642683 -8361973 - SAR_DM Satellite Satellite -722 750 284 1 742 4861 33 2 0 chrUextra 20642785 20643416 -8361240 - DOC2_DM LINE Jockey -3909 884 253 1 742 4945 52 3 10 chrUextra 20643558 20644233 -8360423 - BATUMI_I LTR Pao -4043 3920 3251 1 742 1734 5 0 5 chrUextra 20644333 20644549 -8360107 - R2_DM LINE R2 -2957 650 436 1 742 3996 0 0 0 chrUextra 20644550 20645008 -8359648 - LSU-rRNA_Dme rRNA rRNA -723 3177 2720 1 742 1431 39 6 0 chrUextra 20645108 20645288 -8359368 - Baggins1 LINE LOA -3174 2279 2099 1 742 380 211 46 0 chrUextra 20645465 20645574 -8359082 - DNAREP1_DM LINE Penelope -299 295 182 1 742 292 291 0 0 chrUextra 20645603 20645689 -8358967 + DMRT1C LINE R1 4175 4260 -1183 1 742 2676 189 17 16 chrUextra 20645883 20646558 -8358098 + SAR_DM Satellite Satellite 1 675 -401 1 742 2802 52 27 34 chrUextra 20646661 20647333 -8357323 + DM176_I LTR Gypsy 110 726 -5694 1 742 353 0 0 0 chrUextra 20647433 20647475 -8357181 - PROTOP_B DNA P -1111 42 1 1 742 4177 30 30 16 chrUextra 20647475 20648108 -8356548 + PROTOP DNA P 3894 4430 -50 1 742 3065 169 15 7 chrUextra 20648208 20648883 -8355773 - SAR_DM Satellite Satellite -554 918 239 1 742 5582 8 8 0 chrUextra 20648992 20649658 -8354998 + FW_DM LINE Jockey 486 1156 -3536 1 742 432 0 0 0 chrUextra 20649758 20649806 -8354850 + (GAGAA)n Simple_repeat Simple_repeat 4 51 0 1 742 5384 24 27 0 chrUextra 20650533 20651208 -8353448 + FW_DM LINE Jockey 2849 3541 -1151 1 742 358 41 20 0 chrUextra 20651308 20651357 -8353299 + ARS406_DM Unknown Unknown 140 189 -164 1 742 2859 180 11 9 chrUextra 20651314 20651976 -8352680 - SAR_DM Satellite Satellite -615 857 195 1 742 5893 0 0 1 chrUextra 20654408 20655083 -8349573 - LSU-rRNA_Dme rRNA rRNA -742 3158 2485 1 742 5375 22 0 3 chrUextra 20655184 20655858 -8348798 - NINJA_I LTR Pao -82 5929 5258 1 742 4319 26 0 0 chrUextra 20655958 20656486 -8348170 - FW_DM LINE Jockey -925 3767 3240 1 742 1204 14 0 0 chrUextra 20656486 20656633 -8348023 + STALKER4_LTR LTR Gypsy 1 147 -255 1 742 2492 175 46 25 chrUextra 20656733 20657407 -8347249 + SAR_DM Satellite Satellite 472 1159 -313 1 742 2138 101 8 70 chrUextra 20657514 20658183 -8346473 - DMSAT6 Satellite Satellite -151 626 1 1 742 2036 179 12 7 chrUextra 20658288 20658953 -8345703 + SAR_DM Satellite Satellite 1 667 -677 1 742 40 67 0 0 chrUextra 20659615 20659690 -8344966 + AT_rich Low_complexity Low_complexity 1 75 0 1 742 1080 167 19 11 chrUextra 20659841 20660102 -8344554 + SAR_DM Satellite Satellite 527 789 -683 1 742 1109 164 18 5 chrUextra 20660113 20660506 -8344150 + SAR_DM Satellite Satellite 1 397 -680 1 742 27 49 0 0 chrUextra 20660889 20660930 -8343726 + AT_rich Low_complexity Low_complexity 1 41 0 1 742 21 95 0 0 chrUextra 20661143 20661206 -8343450 + AT_rich Low_complexity Low_complexity 1 63 0 1 742 565 0 0 0 chrUextra 20661218 20661283 -8343373 + LSU-rRNA_Dme rRNA rRNA 1 65 -3835 1 742 1167 19 6 0 chrUextra 20661383 20661544 -8343112 + FW_DM LINE Jockey 4530 4691 -1 1 742 424 310 17 12 chrUextra 20661807 20662054 -8342602 - GTWIN_I LTR Gypsy -2883 3538 3319 1 742 5799 3 0 0 chrUextra 20662158 20662833 -8341823 - MDG3_I LTR Gypsy -1563 3423 2749 1 742 5523 27 0 0 chrUextra 20662933 20663608 -8341048 - R1_DM LINE R1 -2396 2960 2286 1 742 942 62 8 0 chrUextra 20663708 20663838 -8340818 - R1_DM LINE R1 -5225 131 1 1 742 4149 27 8 0 chrUextra 20663871 20664383 -8340273 - R1_DM LINE R1 0 5356 4841 1 742 3021 183 9 4 chrUextra 20664483 20665158 -8339498 - SAR_DM Satellite Satellite -539 933 256 1 742 5568 1 0 0 chrUextra 20665258 20665933 -8338723 - ACCORD_I LTR Gypsy -652 5636 4962 1 742 954 20 26 26 chrUextra 20666033 20666185 -8338471 + NTS_DM Other Other 89 240 0 1 742 1744 21 17 17 chrUextra 20666185 20666425 -8338231 + NTS_DM Other Other 1 240 0 1 742 1756 17 17 17 chrUextra 20666425 20666665 -8337991 + NTS_DM Other Other 1 240 0 1 742 358 23 0 0 chrUextra 20666665 20666708 -8337948 + NTS_DM Other Other 1 43 -197 1 742 2410 10 20 0 chrUextra 20667584 20667890 -8336766 + QUASIMODO_I LTR Gypsy 5749 6060 0 1 742 3148 3 3 5 chrUextra 20667890 20668258 -8336398 + QUASIMODO_LTR LTR Gypsy 1 367 -291 1 742 6111 4 0 0 chrUextra 20668358 20669033 -8335623 - LSU-rRNA_Dme rRNA rRNA -1395 2505 1831 1 742 21 89 0 0 chrUextra 20669287 20669343 -8335313 + AT_rich Low_complexity Low_complexity 1 56 0 1 742 4091 0 2 0 chrUextra 20669362 20669808 -8334848 - SSU-rRNA_Dme rRNA rRNA 0 1995 1549 1 742 1441 164 33 10 chrUextra 20669908 20670209 -8334447 - SAR_DM Satellite Satellite -622 850 543 1 742 1469 173 32 9 chrUextra 20670220 20670558 -8334098 - SAR_DM Satellite Satellite -396 1076 731 1 742 4255 53 57 27 chrUextra 20670683 20671356 -8333300 - STALKER4_I LTR Gypsy -4956 1574 882 1 742 5767 7 1 3 chrUextra 20671458 20672133 -8332523 + STALKER4_I LTR Gypsy 1269 1942 -4588 1 742 3000 172 13 25 chrUextra 20672233 20672907 -8331749 + SAR_DM Satellite Satellite 438 1103 -369 1 742 3516 29 0 2 chrUextra 20673008 20673430 -8331226 + NINJA_I LTR Pao 5591 6011 0 1 742 1827 33 0 52 chrUextra 20673430 20673682 -8330974 + NINJA_LTR LTR Pao 1 239 -78 1 742 2925 188 13 21 chrUextra 20673784 20674458 -8330198 - SAR_DM Satellite Satellite -308 1164 496 1 742 4441 0 2 2 chrUextra 20674558 20675047 -8329609 + SSU-rRNA_Dme rRNA rRNA 1507 1995 0 1 742 21 89 0 0 chrUextra 20675066 20675122 -8329534 + AT_rich Low_complexity Low_complexity 1 56 0 1 742 1646 11 0 0 chrUextra 20675333 20675515 -8329141 - LSU-rRNA_Dme rRNA rRNA -1141 2759 2578 1 742 4567 0 0 0 chrUextra 20675511 20676008 -8328648 - R2_DM LINE R2 -5 3602 3106 1 742 5853 22 0 0 chrUextra 20676108 20676781 -8327875 + R1_DM LINE R1 1540 2212 -3144 1 742 3002 181 12 12 chrUextra 20676883 20677558 -8327098 + SAR_DM Satellite Satellite 304 978 -494 1 742 2939 179 19 12 chrUextra 20677661 20678333 -8326323 - SAR_DM Satellite Satellite -396 1076 400 1 742 2574 202 8 17 chrUextra 20678433 20679107 -8325549 - SAR_DM Satellite Satellite -676 668 1 1 742 1620 4 0 0 chrUextra 20679983 20680658 -8323998 + (TAGA)n Simple_repeat Simple_repeat 1 675 0 1 742 3047 173 6 21 chrUextra 20680767 20681433 -8323223 + SAR_DM Satellite Satellite 195 850 -622 1 742 4861 2 0 2 chrUextra 20681533 20682071 -8322585 + LSU-rRNA_Dme rRNA rRNA 2045 2581 -1319 1 742 1298 14 0 0 chrUextra 20682063 20682208 -8322448 + R2_DM LINE R2 873 1017 -2590 1 742 263 253 0 26 chrUextra 20682538 20682615 -8322041 + BS2 LINE Jockey 4149 4223 -498 1 742 781 21 0 20 chrUextra 20683083 20683182 -8321474 + BATUMI_I LTR Pao 7191 7287 -676 1 742 277 231 58 77 chrUextra 20683359 20683514 -8321142 + Gypsy3_I LTR Gypsy 1 152 -6025 1 742 223 161 33 74 chrUextra 20683524 20683645 -8321011 + (TTATA)n Simple_repeat Simple_repeat 2 117 0 1 742 280 162 14 29 chrUextra 20683645 20683715 -8320941 + Gypsy3_I LTR Gypsy 173 241 -5936 1 742 5627 30 0 0 chrUextra 20683858 20684533 -8320123 + MDG1_I LTR Gypsy 4376 5050 -1546 1 742 4922 40 2 0 chrUextra 20684691 20685308 -8319348 + IDEFIX_I LTR Gypsy 1 618 -5010 1 742 3218 158 33 14 chrUextra 20685413 20686079 -8318577 + SAR_DM Satellite Satellite 369 1047 -425 1 742 5585 15 56 0 chrUextra 20686183 20686858 -8317798 + STALKER4_I LTR Gypsy 1885 2597 -3933 1 742 5473 56 1 1 chrUextra 20686958 20687633 -8317023 + R1_DM LINE R1 1067 1741 -3615 1 742 2584 205 8 18 chrUextra 20688508 20689183 -8315473 - SAR_DM Satellite Satellite -676 667 1 1 742 434 185 9 18 chrUextra 20689283 20689393 -8315263 + XDMR_DM Unknown Unknown 252 360 0 1 742 2734 187 9 23 chrUextra 20689307 20689954 -8314702 - SAR_DM Satellite Satellite -354 1118 481 1 742 1713 13 17 22 chrUextra 20690059 20690289 -8314367 - NTS_DM Other Other -11 229 1 1 742 1835 17 17 17 chrUextra 20690289 20690529 -8314127 - NTS_DM Other Other 0 240 1 1 742 1463 20 25 20 chrUextra 20690529 20690733 -8313923 - NTS_DM Other Other 0 240 36 1 742 657 0 0 0 chrUextra 20690833 20690906 -8313750 + (TCTTG)n Simple_repeat Simple_repeat 3 75 0 1 742 429 69 0 0 chrUextra 20692383 20692441 -8312215 - NTS_DM Other Other -179 61 4 1 742 1325 6 0 24 chrUextra 20692551 20692717 -8311939 - NTS_DM Other Other -78 162 1 1 742 1926 4 17 13 chrUextra 20692717 20692956 -8311700 - NTS_DM Other Other 0 240 1 1 742 712 0 39 29 chrUextra 20692956 20693058 -8311598 - NTS_DM Other Other 0 240 138 1 742 5813 31 0 0 chrUextra 20693158 20693833 -8310823 + DIVER_I LTR Pao 580 1254 -4389 1 742 3187 172 9 8 chrUextra 20693933 20694595 -8310061 - SAR_DM Satellite Satellite -484 988 326 1 742 380 0 0 22 chrUextra 20694708 20694754 -8309902 + POGO DNA Pogo 659 703 -1418 1 742 452 0 0 0 chrUextra 20694752 20694802 -8309854 - Copia_I LTR Copia -4543 50 1 1 742 2340 4 4 0 chrUextra 20694802 20695077 -8309579 - Copia_LTR LTR Copia 0 276 1 1 742 524 115 31 0 chrUextra 20695154 20695250 -8309406 - PROTOP DNA P -861 3619 3521 1 742 272 0 0 0 chrUextra 20695483 20695513 -8309143 - MDG1_I LTR Gypsy -6566 30 1 1 742 3064 20 0 0 chrUextra 20695513 20695869 -8308787 - MDG1_LTR LTR Gypsy 0 442 87 1 742 423 100 0 0 chrUextra 20695869 20695939 -8308717 + (TTA)n Simple_repeat Simple_repeat 3 72 0 1 742 1320 28 3 23 chrUextra 20695943 20696158 -8308498 - MDG1_I LTR Gypsy -98 6799 6399 1 742 518 17 0 0 chrUextra 20696258 20696316 -8308340 - NTS_DM Other Other -182 58 1 1 742 1472 20 20 20 chrUextra 20696316 20696519 -8308137 - NTS_DM Other Other 0 240 38 1 742 840 9 9 36 chrUextra 20696519 20696631 -8308025 - NTS_DM Other Other -107 133 25 1 742 21 57 0 0 chrUextra 20696657 20696692 -8307964 + AT_rich Low_complexity Low_complexity 1 35 0 1 742 1304 18 0 6 chrUextra 20696692 20696857 -8307799 - NTS_DM Other Other -39 201 38 1 742 587 13 13 0 chrUextra 20696857 20696933 -8307723 - NTS_DM Other Other -107 133 57 1 742 1125 93 0 0 chrUextra 20697034 20697704 -8306952 + (CAAGA)n Simple_repeat Simple_repeat 1 670 0 1 742 3168 167 16 15 chrUextra 20697808 20698483 -8306173 + SAR_DM Satellite Satellite 208 883 -589 1 742 5964 0 3 6 chrUextra 20698583 20699258 -8305398 + SSU-rRNA_Dme rRNA rRNA 855 1527 -468 1 742 5570 24 62 0 chrUextra 20699358 20700033 -8304623 + R1_DM LINE R1 2782 3498 -1858 1 742 1716 18 13 22 chrUextra 20700133 20700358 -8304298 - NTS_DM Other Other -17 223 1 1 742 1472 20 20 20 chrUextra 20700358 20700561 -8304095 - NTS_DM Other Other 0 240 38 1 742 851 0 0 0 chrUextra 20700561 20700657 -8303999 - NTS_DM Other Other -107 133 38 1 742 833 9 18 27 chrUextra 20700657 20700767 -8303889 - NTS_DM Other Other -107 133 25 1 742 3121 182 5 6 chrUextra 20700909 20701565 -8303091 + SAR_DM Satellite Satellite 422 1076 -396 1 742 1722 183 15 5 chrUextra 20701687 20702358 -8302298 + SAR_DM Satellite Satellite 1 678 -569 1 742 5448 27 0 1 chrUextra 20702459 20703133 -8301523 + IDEFIX_I LTR Gypsy 4086 4758 -870 1 742 6163 1 0 0 chrUextra 20703237 20703908 -8300748 - SSU-rRNA_Dme rRNA rRNA -1099 896 226 1 742 2881 182 19 22 chrUextra 20704008 20704683 -8299973 - SAR_DM Satellite Satellite -319 1153 481 1 742 1815 66 0 4 chrUextra 20704783 20705027 -8299629 + R1_DM LINE R1 369 611 -4745 1 742 1749 56 0 0 chrUextra 20705029 20705242 -8299414 + R1_DM LINE R1 1247 1459 -3897 1 742 1702 34 0 5 chrUextra 20705253 20705458 -8299198 + R1_DM LINE R1 1556 1759 -3597 1 742 198 0 0 0 chrUextra 20706085 20706107 -8298549 + (T)n Simple_repeat Simple_repeat 1 22 0 1 742 5297 10 6 3 chrUextra 20706335 20707008 -8297648 - Stalker2_I LTR Gypsy -5810 1592 918 1 742 3138 173 12 9 chrUextra 20707108 20707783 -8296873 - SAR_DM Satellite Satellite -396 1076 400 1 742 2935 176 17 9 chrUextra 20707883 20708520 -8296136 - SAR_DM Satellite Satellite -636 836 195 1 742 816 92 8 15 chrUextra 20708426 20708558 -8296098 + ARS406_DM Unknown Unknown 1 131 -222 1 742 3238 167 9 13 chrUextra 20708661 20709333 -8295323 + SAR_DM Satellite Satellite 361 1029 -443 1 743 3374 157 11 11 chrUextra 20709437 20710106 -8294550 + SAR_DM Satellite Satellite 369 1037 -435 1 743 3131 18 95 0 chrUextra 20710208 20710755 -8293901 + R1_DM LINE R1 4093 4691 -665 1 743 1039 73 0 7 chrUextra 20710745 20710883 -8293773 + R1_DM LINE R1 5034 5170 -186 1 743 4158 8 0 2 chrUextra 20710983 20711468 -8293188 + DOC LINE Jockey 4242 4725 0 1 743 5762 22 0 0 chrUextra 20711759 20712433 -8292223 - Invader3_I LTR Gypsy -2380 2508 1835 1 743 5797 27 0 0 chrUextra 20712533 20713208 -8291448 - MDG1_I LTR Gypsy -2139 4457 3783 1 743 5281 37 27 1 chrUextra 20713308 20713983 -8290673 - R1_DM LINE R1 -4187 1169 478 1 743 5145 31 0 3 chrUextra 20714151 20714758 -8289898 + BATUMI_I LTR Pao 4315 4919 -3044 1 743 4712 76 2 5 chrUextra 20714862 20715533 -8289123 + BATUMI_I LTR Pao 4315 5080 -2834 1 743 382 302 35 11 chrUextra 20715639 20715813 -8288843 - XDMR Unknown Unknown -183 178 1 1 743 1153 288 69 31 chrUextra 20715665 20716306 -8288350 + SAR_DM Satellite Satellite 566 1230 -242 1 743 3349 164 9 9 chrUextra 20716408 20717083 -8287573 + SAR_DM Satellite Satellite 393 1067 -405 1 743 1053 19 25 25 chrUextra 20717183 20717341 -8287315 + NTS_DM Other Other 83 240 0 1 743 1813 21 17 17 chrUextra 20717341 20717581 -8287075 + NTS_DM Other Other 1 240 0 1 743 1177 8 0 0 chrUextra 20717581 20717714 -8286942 + NTS_DM Other Other 1 133 -107 1 743 1066 22 7 7 chrUextra 20717714 20717854 -8286802 + NTS_DM Other Other 38 177 -63 1 743 34 24 0 0 chrUextra 20718107 20718148 -8286508 + AT_rich Low_complexity Low_complexity 1 41 0 1 743 1389 70 22 53 chrUextra 20718733 20718960 -8285696 - Gypsy12_I LTR Gypsy -5326 220 1 1 743 2564 111 14 49 chrUextra 20718960 20719387 -8285269 - Gypsy12_LTR LTR Gypsy 0 2336 1925 1 743 4555 30 2 0 chrUextra 20719508 20720045 -8284611 + R1_DM LINE R1 4296 4833 -523 1 743 1138 29 7 0 chrUextra 20720045 20720183 -8284473 - Stalker3_LTR LTR Gypsy 0 372 234 1 743 2961 170 12 7 chrUextra 20720283 20720956 -8283700 + SAR_DM Satellite Satellite 1 675 -1037 1 743 1818 147 80 3 chrUextra 20721071 20721732 -8282924 + SAR_DM Satellite Satellite 1 712 -679 1 743 834 10 0 0 chrUextra 20721833 20721929 -8282727 + NTS_DM Other Other 38 133 -107 1 743 1304 18 0 6 chrUextra 20721929 20722094 -8282562 + NTS_DM Other Other 38 201 -39 1 743 907 9 0 27 chrUextra 20722146 20722258 -8282398 + NTS_DM Other Other 25 133 -107 1 743 1304 18 0 6 chrUextra 20722258 20722423 -8282233 + NTS_DM Other Other 38 201 -39 1 743 21 57 0 0 chrUextra 20722423 20722458 -8282198 + AT_rich Low_complexity Low_complexity 1 35 0 1 743 1120 8 0 0 chrUextra 20722608 20722738 -8281918 - ACCORD_LTR LTR Gypsy -222 336 207 1 743 4737 4 0 0 chrUextra 20722737 20723283 -8281373 - DMRT1A LINE R1 -2 5181 4636 1 743 2412 175 12 5 chrUextra 20723403 20724042 -8280614 - SAR_DM Satellite Satellite -677 643 1 1 743 3380 20 78 6 chrUextra 20724158 20724833 -8279823 + FW_DM LINE Jockey 3469 4192 -500 1 743 897 173 102 15 chrUextra 20725133 20725338 -8279318 + DMLTR5 LTR Gypsy 44 266 0 1 743 351 49 65 16 chrUextra 20725337 20725399 -8279257 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 1 743 244 128 0 21 chrUextra 20725418 20725466 -8279190 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 743 5845 0 0 0 chrUextra 20725710 20726383 -8278273 + DMRT1A LINE R1 3797 4469 -714 1 743 2376 4 0 0 chrUextra 20727258 20727531 -8277125 - LSU-rRNA_Dme rRNA rRNA -988 2912 2640 1 743 2728 9 0 0 chrUextra 20727529 20727847 -8276809 - R1_DM LINE R1 0 5356 5039 1 743 741 0 0 0 chrUextra 20727849 20727933 -8276723 - LSU-rRNA_Dme rRNA rRNA -1251 2649 2566 1 743 1339 112 5 18 chrUextra 20728033 20728252 -8276404 - Gypsy12_I LTR Gypsy -3096 2450 2235 1 743 2970 117 7 0 chrUextra 20728246 20728707 -8275949 - Gypsy12_I LTR Gypsy -3457 2089 1626 1 743 4683 3 133 1 chrUextra 20728807 20729481 -8275175 + NOMAD_I LTR Gypsy 675 1437 -5135 1 743 1514 15 30 0 chrUextra 20729581 20729778 -8274878 + R1_DM LINE R1 4864 5066 -290 1 743 924 44 0 0 chrUextra 20729775 20729889 -8274767 + R1_DM LINE R1 5243 5356 0 1 743 2369 58 15 9 chrUextra 20729922 20730255 -8274401 + R1_DM LINE R1 1 335 -5021 1 743 5402 31 0 0 chrUextra 20730355 20731029 -8273627 - MDG1_I LTR Gypsy -2496 4100 3427 1 743 2959 181 15 6 chrUextra 20731132 20731803 -8272853 - SAR_DM Satellite Satellite -549 923 247 1 743 2767 12 0 0 chrUextra 20731903 20732230 -8272426 - DM176_I LTR Gypsy -6093 327 1 1 743 2016 20 16 0 chrUextra 20732230 20732483 -8272173 - DM176_LTR LTR Gypsy 0 507 251 1 743 787 11 0 0 chrUextra 20732484 20732577 -8272079 - DM176_LTR LTR Gypsy -224 283 191 1 743 2991 159 24 15 chrUextra 20732678 20733341 -8271315 - SAR_DM Satellite Satellite -478 994 326 1 743 5245 40 1 1 chrUextra 20733451 20734125 -8270531 - R1_DM LINE R1 -3927 1429 756 1 743 2851 64 13 0 chrUextra 20734225 20734617 -8270039 - TART LINE telomeric -12036 2441 2045 1 743 1937 82 72 0 chrUextra 20734608 20734899 -8269757 - TART LINE telomeric -12618 1859 1548 1 743 22 56 0 0 chrUextra 20735053 20735089 -8269567 + AT_rich Low_complexity Low_complexity 1 36 0 1 743 246 150 0 0 chrUextra 20735094 20735134 -8269522 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 743 246 150 0 0 chrUextra 20735186 20735226 -8269430 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 743 255 125 0 0 chrUextra 20735269 20735309 -8269347 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 743 22 56 0 0 chrUextra 20735322 20735358 -8269298 + AT_rich Low_complexity Low_complexity 1 36 0 1 743 870 9 0 27 chrUextra 20735384 20735496 -8269160 + NTS_DM Other Other 25 133 -107 1 743 1233 19 0 6 chrUextra 20735498 20735661 -8268995 + NTS_DM Other Other 40 201 -39 1 743 5705 13 0 0 chrUextra 20736547 20737221 -8267435 - DOC2_DM LINE Jockey -976 3817 3144 1 743 22 0 0 0 chrUextra 20737373 20737395 -8267261 + AT_rich Low_complexity Low_complexity 1 22 0 1 743 236 231 0 13 chrUextra 20737489 20737568 -8267088 + (TA)n Simple_repeat Simple_repeat 2 79 0 1 743 401 103 15 0 chrUextra 20737644 20737712 -8266944 + (TA)n Simple_repeat Simple_repeat 1 69 0 1 743 2402 0 0 0 chrUextra 20737712 20737995 -8266661 + QUASIMODO_LTR LTR Gypsy 2 284 -374 1 743 3780 13 40 0 chrUextra 20738869 20739341 -8265315 - IDEFIX_LTR LTR Gypsy -103 491 1 1 743 1654 0 0 5 chrUextra 20739341 20739543 -8265113 - IDEFIX_I LTR Gypsy 0 5628 5428 1 743 45 0 0 0 chrUextra 20740064 20740109 -8264547 + AT_rich Low_complexity Low_complexity 1 45 0 1 743 180 0 0 0 chrUextra 20740297 20740317 -8264339 + (TAGA)n Simple_repeat Simple_repeat 1 20 0 1 743 23 54 0 0 chrUextra 20740434 20740471 -8264185 + AT_rich Low_complexity Low_complexity 1 37 0 1 743 832 9 9 27 chrUextra 20740497 20740608 -8264048 + NTS_DM Other Other 25 133 -107 1 743 817 0 0 0 chrUextra 20740608 20740704 -8263952 + NTS_DM Other Other 38 133 -107 1 743 1408 20 20 20 chrUextra 20740704 20740907 -8263749 + NTS_DM Other Other 38 240 0 1 743 1414 27 0 5 chrUextra 20740907 20741091 -8263565 + NTS_DM Other Other 1 183 -57 1 743 5333 25 7 0 chrUextra 20741191 20741865 -8262791 + Invader2_I LTR Gypsy 1970 2648 -1944 1 743 1176 0 0 0 chrUextra 20742073 20742208 -8262448 - 5S_DM RNA RNA 0 135 1 1 743 1147 7 0 0 chrUextra 20742432 20742567 -8262089 - 5S_DM RNA RNA 0 135 1 1 743 5471 25 0 1 chrUextra 20742739 20743413 -8261243 + R1_DM LINE R1 2296 2968 -2388 1 743 4217 72 6 3 chrUextra 20743520 20744187 -8260469 + G2_DM LINE Jockey 4 514 -2588 1 743 5780 3 0 1 chrUextra 20744287 20744957 -8259699 - G2_DM LINE Jockey -2176 926 258 1 743 4605 25 39 58 chrUextra 20745061 20745735 -8258921 + BATUMI_I LTR Pao 2255 2915 -5048 1 743 5232 7 0 3 chrUextra 20745835 20746449 -8258207 + LSU-rRNA_Dme rRNA rRNA 2033 2644 -1256 1 743 551 0 0 15 chrUextra 20746442 20746509 -8258147 + R1_DM LINE R1 4841 4906 -450 1 743 1688 42 4 40 chrUextra 20746746 20746996 -8257660 - BATUMI_LTR LTR Pao 0 272 32 1 743 1863 69 0 8 chrUextra 20747018 20747282 -8257374 - BATUMI_I LTR Pao 0 7963 7702 1 743 5284 15 46 6 chrUextra 20747383 20748057 -8256599 + MICROPIA_I LTR Gypsy 3737 4437 -39 1 743 5709 3 0 0 chrUextra 20748157 20748831 -8255825 - ROO_I LTR Pao -2727 5529 4856 1 743 5643 0 1 1 chrUextra 20748931 20749605 -8255051 + R1_DM LINE R1 589 1262 -4094 1 743 817 106 0 0 chrUextra 20749708 20749840 -8254816 - ARS406_DM Unknown Unknown -221 132 1 1 743 2808 182 9 8 chrUextra 20749747 20750379 -8254277 + SAR_DM Satellite Satellite 195 827 -645 1 743 28 48 0 0 chrUextra 20750498 20750540 -8254116 + AT_rich Low_complexity Low_complexity 1 42 0 1 743 32 0 0 0 chrUextra 20750873 20750905 -8253751 + AT_rich Low_complexity Low_complexity 1 32 0 1 743 938 9 0 17 chrUextra 20751037 20751153 -8253503 + SSU-rRNA_Dme rRNA rRNA 1 114 -1881 1 743 5898 1 0 0 chrUextra 20751253 20751927 -8252729 - SSU-rRNA_Dme rRNA rRNA -893 1102 429 1 743 4983 25 1 39 chrUextra 20752027 20752701 -8251955 + DOC2_DM LINE Jockey 301 949 -3844 1 743 4080 13 84 13 chrUextra 20752801 20753336 -8251320 - CIRCE LINE Composite -2269 4087 3515 1 743 420 172 7 0 chrUextra 20753333 20753473 -8251183 + Gypsy9_I LTR Gypsy 1895 1971 -2706 1 743 4760 26 82 0 chrUextra 20753575 20754249 -8250407 - R1_DM LINE R1 -166 5190 4462 1 743 5869 5 0 0 chrUextra 20754349 20755023 -8249633 - LSU-rRNA_Dme rRNA rRNA -429 3471 2798 1 743 5891 1 1 0 chrUextra 20755123 20755797 -8248859 + LSU-rRNA_Dme rRNA rRNA 3213 3887 -13 1 743 5829 0 0 0 chrUextra 20755897 20756571 -8248085 - DOC LINE Jockey -2341 2384 1711 1 743 37 39 0 0 chrUextra 20756694 20756745 -8247911 + AT_rich Low_complexity Low_complexity 1 51 0 1 743 29 47 0 0 chrUextra 20757100 20757143 -8247513 + AT_rich Low_complexity Low_complexity 1 43 0 1 743 5600 9 1 0 chrUextra 20757445 20758119 -8246537 - STALKER4_I LTR Gypsy -822 5708 5034 1 743 2853 259 33 16 chrUextra 20758221 20759627 -8245029 - SAR_DM Satellite Satellite -911 1430 1 1 743 5859 1 3 0 chrUextra 20759767 20760441 -8244215 - LSU-rRNA_Dme rRNA rRNA -394 3506 2831 1 743 4415 31 28 8 chrUextra 20760541 20761160 -8243496 + PROTOP DNA P 193 823 -3657 1 743 451 0 0 0 chrUextra 20761155 20761215 -8243441 + PROTOP DNA P 3802 3861 -619 1 743 5453 30 0 0 chrUextra 20761315 20761989 -8242667 - R1_DM LINE R1 -2076 3280 2607 1 743 2881 180 13 13 chrUextra 20762092 20762763 -8241893 + SAR_DM Satellite Satellite 332 1002 -470 1 743 2844 186 5 16 chrUextra 20762863 20763537 -8241119 - SAR_DM Satellite Satellite -361 1111 446 1 743 1151 121 33 43 chrUextra 20763637 20764006 -8240650 + QUASIMODO_LTR LTR Gypsy 182 621 -37 1 743 324 0 0 0 chrUextra 20764411 20764447 -8240209 + (CACAA)n Simple_repeat Simple_repeat 3 38 0 1 743 3053 166 12 9 chrUextra 20765186 20765859 -8238797 + SAR_DM Satellite Satellite 332 1006 -466 1 743 1901 93 133 3 chrUextra 20765959 20766281 -8238375 + MDG1_LTR LTR Gypsy 49 412 -30 1 743 2162 89 34 11 chrUextra 20766281 20766633 -8238023 + MDG1_I LTR Gypsy 1 360 -6236 1 743 323 291 39 8 chrUextra 20767130 20767258 -8237398 + Copia2_I LTR Copia 567 698 -3464 1 743 369 0 0 0 chrUextra 20767265 20767310 -8237346 + Copia2_LTR_DM LTR Copia 154 198 0 1 743 847 0 0 0 chrUextra 20767310 20767407 -8237249 + Copia2_I LTR Copia 1 97 -4065 1 743 2601 174 12 23 chrUextra 20767507 20768156 -8236500 + SAR_DM Satellite Satellite 477 1118 -354 1 743 353 177 39 59 chrUextra 20768079 20768181 -8236475 - XDMR_DM Unknown Unknown -9 351 252 1 743 1978 162 13 10 chrUextra 20769060 20769727 -8234929 + SAR_DM Satellite Satellite 1 668 -677 1 743 832 47 0 0 chrUextra 20769829 20769935 -8234721 - G2_DM LINE Jockey -1738 1364 1259 1 743 4296 48 5 3 chrUextra 20769932 20770503 -8234153 - G2_DM LINE Jockey -2228 874 303 1 743 5707 1 6 1 chrUextra 20770614 20771277 -8233379 - LSU-rRNA_Dme rRNA rRNA -1268 2632 1967 1 743 3149 170 7 6 chrUextra 20771377 20772050 -8232606 - SAR_DM Satellite Satellite -430 1042 369 1 743 499 155 384 0 chrUextra 20773709 20773926 -8230730 - HMSBEAGLE_I LTR Gypsy -432 6097 5797 1 743 1934 111 25 0 chrUextra 20773937 20774252 -8230404 - HMSBEAGLE_I LTR Gypsy -901 5628 5306 1 743 617 124 0 0 chrUextra 20774267 20774372 -8230284 - HMSBEAGLE_I LTR Gypsy -3358 3171 3067 1 743 5424 42 1 0 chrUextra 20774473 20775147 -8229509 - BS2 LINE Jockey -751 3970 3296 1 743 28 48 0 0 chrUextra 20775304 20775346 -8229310 + AT_rich Low_complexity Low_complexity 1 42 0 1 743 2869 12 0 0 chrUextra 20776021 20776363 -8228293 + TRANSIB2 DNA Transib 828 1169 -1675 1 743 2619 24 24 0 chrUextra 20776362 20776695 -8227961 + TRANSIB2 DNA Transib 2405 2745 -99 1 743 859 90 0 0 chrUextra 20776795 20776928 -8227728 - ARS406_DM Unknown Unknown -220 133 1 1 743 3779 267 20 24 chrUextra 20776835 20778221 -8226435 + SAR_DM Satellite Satellite 1 1380 -208 1 743 540 42 0 14 chrUextra 20778171 20778243 -8226413 - ARS406_DM Unknown Unknown -164 189 119 1 743 6186 3 0 0 chrUextra 20778343 20779017 -8225639 - R2_DM LINE R2 -1584 2023 1350 1 743 1021 0 0 16 chrUextra 20779119 20779244 -8225412 - QUASIMODO_LTR LTR Gypsy -535 123 1 1 743 4382 6 11 0 chrUextra 20779244 20779791 -8224865 - QUASIMODO_I LTR Gypsy 0 6060 5508 1 743 1937 27 0 0 chrUextra 20779891 20780116 -8224540 - PROTOP_A DNA P -880 225 1 1 743 5093 45 3 6 chrUextra 20780665 20781339 -8223317 + IDEFIX_I LTR Gypsy 3140 3811 -1817 1 743 1047 182 150 29 chrUextra 20781439 20781909 -8222747 + Gypsy12_LTR LTR Gypsy 1217 1727 -553 1 743 1194 61 27 48 chrUextra 20781923 20782111 -8222545 + Gypsy12_I LTR Gypsy 1 184 -5362 1 743 1360 21 26 21 chrUextra 20782213 20782407 -8222249 + NTS_DM Other Other 46 240 0 1 743 1835 17 17 17 chrUextra 20782407 20782647 -8222009 + NTS_DM Other Other 1 240 0 1 743 1716 26 25 17 chrUextra 20782647 20782885 -8221771 + NTS_DM Other Other 1 240 0 1 743 3301 149 25 21 chrUextra 20782988 20783661 -8220995 - SAR_DM Satellite Satellite -464 1008 333 1 743 4374 91 1 45 chrUextra 20783764 20784431 -8220225 - R1_DM LINE R1 -4145 1211 574 1 743 5431 8 5 12 chrUextra 20784535 20785205 -8219451 + STALKER4_I LTR Gypsy 5634 6298 -232 1 743 4902 2 0 0 chrUextra 20785311 20785845 -8218811 - SSU-rRNA_Dme rRNA rRNA -1461 534 1 1 743 3145 170 9 19 chrUextra 20786083 20786756 -8217900 + SAR_DM Satellite Satellite 438 1103 -369 1 743 6084 1 0 0 chrUextra 20786857 20787531 -8217125 - R1_DM LINE R1 -3119 2237 1564 1 743 3005 188 9 8 chrUextra 20787634 20788304 -8216352 + SAR_DM Satellite Satellite 192 862 -610 1 743 6036 1 1 0 chrUextra 20788414 20789079 -8215577 - LSU-rRNA_Dme rRNA rRNA -1268 2632 1967 1 743 5880 5 0 0 chrUextra 20789179 20789853 -8214803 + Invader2_I LTR Gypsy 2580 3253 -1339 1 743 6128 0 5 0 chrUextra 20789953 20790627 -8214029 + LSU-rRNA_Dme rRNA rRNA 3071 3747 -153 1 743 34 24 0 0 chrUextra 20791121 20791162 -8213494 + AT_rich Low_complexity Low_complexity 1 41 0 1 743 5898 9 0 0 chrUextra 20791503 20792175 -8212481 - QUASIMODO_I LTR Gypsy -2681 3379 2708 1 743 3156 166 17 9 chrUextra 20792275 20792932 -8211724 - SAR_DM Satellite Satellite -485 987 326 1 743 3090 183 6 6 chrUextra 20793075 20793723 -8210933 - SAR_DM Satellite Satellite -396 1076 429 1 743 442 88 44 0 chrUextra 20793869 20793937 -8210719 - DNAREP1_DM LINE Penelope -2 592 522 1 743 429 149 0 0 chrUextra 20793934 20794001 -8210655 - Gypsy_LTR LTR Gypsy -415 67 1 1 743 3286 137 14 0 chrUextra 20794001 20794497 -8210159 - Gypsy_I LTR Gypsy 0 6507 6005 1 743 6060 0 1 0 chrUextra 20794597 20795271 -8209385 - FW_DM LINE Jockey -160 4532 3858 1 743 2073 4 0 0 chrUextra 20795371 20795605 -8209051 - DM176_LTR LTR Gypsy -273 234 1 1 743 1158 122 0 0 chrUextra 20795606 20796044 -8208612 + (TA)n Simple_repeat Simple_repeat 1 438 0 1 743 5929 3 0 1 chrUextra 20796145 20796819 -8207837 + ROO_I LTR Pao 3613 4285 -3971 1 743 3059 196 6 6 chrUextra 20796919 20797593 -8207063 - SAR_DM Satellite Satellite -544 928 255 1 743 5662 39 0 0 chrUextra 20797693 20798367 -8206289 - BATUMI_I LTR Pao -2801 5162 4489 1 743 21 89 0 0 chrUextra 20798996 20799052 -8205604 + AT_rich Low_complexity Low_complexity 1 56 0 1 743 627 0 0 0 chrUextra 20799071 20799141 -8205515 - SSU-rRNA_Dme rRNA rRNA 0 1995 1926 1 743 962 70 6 20 chrUextra 20799242 20799915 -8204741 - RSP Satellite Satellite -23 663 1 1 743 5829 21 0 1 chrUextra 20800015 20800689 -8203967 - FW_DM LINE Jockey -455 4237 3565 1 743 3162 180 10 8 chrUextra 20800792 20801463 -8203193 - SAR_DM Satellite Satellite -549 923 251 1 743 5297 2 0 0 chrUextra 20801563 20802192 -8202464 + Invader2_I LTR Gypsy 3964 4592 0 1 743 403 0 0 0 chrUextra 20802192 20802237 -8202419 + Invader2_LTR LTR Gypsy 1 45 -221 1 743 6137 1 0 0 chrUextra 20802337 20803011 -8201645 - FW_DM LINE Jockey -309 4383 3710 1 743 946 178 102 15 chrUextra 20803301 20803506 -8201150 + DMLTR5 LTR Gypsy 44 266 0 1 743 372 49 65 16 chrUextra 20803505 20803567 -8201089 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 1 743 259 128 0 21 chrUextra 20803589 20803637 -8201019 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 743 21 89 0 0 chrUextra 20804215 20804271 -8200385 + AT_rich Low_complexity Low_complexity 1 56 0 1 743 2450 0 4 0 chrUextra 20804290 20804559 -8200097 - SSU-rRNA_Dme rRNA rRNA 0 1995 1726 1 743 2215 29 11 0 chrUextra 20804661 20804933 -8199723 + Gypsy7_I LTR Gypsy 3633 3907 -1077 1 743 1401 157 14 28 chrUextra 20805051 20805333 -8199323 + PROTOP_B DNA P 867 1144 -9 1 743 5430 8 3 12 chrUextra 20805449 20806107 -8198549 + STALKER4_I LTR Gypsy 1064 1715 -4815 1 743 5266 0 2 2 chrUextra 20806207 20806786 -8197870 + LSU-rRNA_Dme rRNA rRNA 3322 3900 0 1 743 2222 164 17 11 chrUextra 20807756 20808423 -8196233 + SAR_DM Satellite Satellite 1 671 -569 1 743 34 24 0 0 chrUextra 20808688 20808729 -8195927 + AT_rich Low_complexity Low_complexity 1 41 0 1 743 21 95 0 0 chrUextra 20808942 20809005 -8195651 + AT_rich Low_complexity Low_complexity 1 63 0 1 743 1649 0 0 5 chrUextra 20809017 20809203 -8195453 + LSU-rRNA_Dme rRNA rRNA 1 185 -3715 1 743 3218 168 10 12 chrUextra 20809303 20809977 -8194679 + SAR_DM Satellite Satellite 334 1006 -466 1 743 3073 186 7 9 chrUextra 20810077 20810750 -8193906 + SAR_DM Satellite Satellite 287 958 -514 1 743 6013 1 1 0 chrUextra 20810851 20811525 -8193131 + ROO_I LTR Pao 5287 5961 -2295 1 743 5672 28 5 1 chrUextra 20811625 20812299 -8192357 - R1_DM LINE R1 -419 4937 4262 1 743 2216 276 11 11 chrUextra 20812399 20813050 -8191606 + Gypsy_I LTR Gypsy 2452 3102 -3405 1 743 5935 12 0 0 chrUextra 20813177 20813847 -8190809 - MDG3_I LTR Gypsy -3326 1660 991 1 743 346 340 16 14 chrUextra 20814054 20814298 -8190358 - Gypsy3_I LTR Gypsy -4829 1348 1179 1 743 2055 25 0 0 chrUextra 20814721 20814966 -8189690 - ROO_I LTR Pao -6709 1547 1303 1 743 2246 48 134 93 chrUextra 20814955 20815395 -8189261 - ROO_I LTR Pao -7362 894 437 1 743 28 48 0 0 chrUextra 20815618 20815660 -8188996 + AT_rich Low_complexity Low_complexity 1 42 0 1 743 514 119 36 0 chrUextra 20815934 20816018 -8188638 - NTS_DM Other Other -150 90 4 1 743 5961 12 0 0 chrUextra 20816269 20816943 -8187713 - STALKER4_I LTR Gypsy -1760 4770 4097 1 743 281 171 71 0 chrUextra 20817043 20817113 -8187543 - DMTOM1_LTR LTR Gypsy -52 358 284 1 743 266 176 58 14 chrUextra 20817130 20817199 -8187457 - DM176_LTR LTR Gypsy -141 366 295 1 743 850 126 0 59 chrUextra 20817423 20817575 -8187081 - DM176_I LTR Gypsy 0 6420 6278 1 743 777 127 0 7 chrUextra 20817574 20817717 -8186939 - DM297_I LTR Gypsy -486 5681 5540 1 743 3126 170 12 12 chrUextra 20817817 20818491 -8186165 + SAR_DM Satellite Satellite 332 1005 -467 1 743 2807 206 14 20 chrUextra 20818594 20819265 -8185391 + SAR_DM Satellite Satellite 1 666 -203 1 743 227 309 51 51 chrUextra 20819684 20819861 -8184795 + Gypsy6_I LTR Gypsy 4538 4714 -2298 1 743 5642 6 12 1 chrUextra 20820139 20820813 -8183843 + MDG1_I LTR Gypsy 939 1619 -4977 1 743 32 0 0 0 chrUextra 20821106 20821138 -8183518 + AT_rich Low_complexity Low_complexity 1 32 0 1 743 2854 3 3 0 chrUextra 20821270 20821587 -8183069 + SSU-rRNA_Dme rRNA rRNA 1 318 -1677 1 743 3084 184 14 6 chrUextra 20821691 20822358 -8182298 - SAR_DM Satellite Satellite -577 895 224 1 743 6033 0 1 5 chrUextra 20822461 20823135 -8181521 - SSU-rRNA_Dme rRNA rRNA -541 1454 783 1 743 760 26 0 25 chrUextra 20823235 20823355 -8181301 + NTS_DM Other Other 85 201 -39 1 743 859 18 0 35 chrUextra 20823407 20823520 -8181136 + NTS_DM Other Other 25 133 -107 1 743 998 18 0 68 chrUextra 20823520 20823696 -8180960 + NTS_DM Other Other 38 201 -39 1 743 21 57 0 0 chrUextra 20823696 20823731 -8180925 + AT_rich Low_complexity Low_complexity 1 35 0 1 743 722 19 9 69 chrUextra 20823759 20823875 -8180781 + NTS_DM Other Other 25 133 -107 1 743 2447 182 5 5 chrUextra 20824011 20824032 -8180624 - SAR_DM Satellite Satellite -807 672 646 1 743 1070 89 0 0 chrUextra 20824032 20824190 -8180466 + ARS406_DM Unknown Unknown 1 158 -195 1 743 2447 182 5 5 chrUextra 20824190 20824683 -8179973 - SAR_DM Satellite Satellite -807 645 1 1 743 5800 25 0 0 chrUextra 20824783 20825457 -8179199 + R1_DM LINE R1 3959 4632 -724 1 743 3273 183 151 1 chrUextra 20825557 20826231 -8178425 + ROVER-I_DM LTR Gypsy 4077 4851 -1733 1 743 1304 18 0 6 chrUextra 20826363 20826528 -8178128 - NTS_DM Other Other -39 201 38 1 743 907 9 0 27 chrUextra 20826528 20826640 -8178016 - NTS_DM Other Other -107 133 25 1 743 22 56 0 0 chrUextra 20826666 20826702 -8177954 + AT_rich Low_complexity Low_complexity 1 36 0 1 743 269 125 0 0 chrUextra 20826715 20826755 -8177901 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 743 262 150 0 0 chrUextra 20826798 20826838 -8177818 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 743 262 150 0 0 chrUextra 20826890 20826930 -8177726 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 743 5613 27 13 1 chrUextra 20827105 20827779 -8176877 + G2_DM LINE Jockey 471 1152 -1950 1 743 3009 71 101 0 chrUextra 20827885 20828310 -8176346 - DMCR1A LINE CR1 -705 3765 3298 1 743 1852 85 12 0 chrUextra 20828305 20828553 -8176103 - DMCR1A LINE CR1 -1290 3180 2930 1 743 6142 0 0 1 chrUextra 20828653 20829327 -8175329 - LSU-rRNA_Dme rRNA rRNA -549 3351 2679 1 743 5888 3 0 0 chrUextra 20829427 20830074 -8174582 - LSU-rRNA_Dme rRNA rRNA -614 3286 2640 1 743 256 0 0 0 chrUextra 20830072 20830101 -8174555 - R1_DM LINE R1 0 5356 5328 1 743 4455 77 1 35 chrUextra 20830225 20830875 -8173781 - CIRCE LINE Composite -2367 3989 3362 1 743 1801 306 14 18 chrUextra 20830975 20831637 -8173019 + Invader1_I LTR Gypsy 1834 2492 -694 1 743 2861 65 8 18 chrUextra 20832031 20832423 -8172233 - Baggins1 LINE LOA -262 5191 4804 1 743 213 227 0 0 chrUextra 20832530 20832574 -8172082 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 743 230 0 35 0 chrUextra 20833299 20833328 -8171328 - BATUMI_I LTR Pao -6539 1424 1395 1 743 3064 125 17 44 chrUextra 20833349 20833934 -8170722 - BATUMI_I LTR Pao -6646 1317 749 1 743 5278 3 5 68 chrUextra 20834071 20834745 -8169911 - LSU-rRNA_Dme rRNA rRNA -1624 2276 1646 1 743 6047 0 3 3 chrUextra 20834846 20835519 -8169137 - SSU-rRNA_Dme rRNA rRNA -30 1965 1293 1 743 5681 18 31 1 chrUextra 20836393 20837067 -8167589 - FW_DM LINE Jockey -3393 1299 606 1 743 4129 45 40 8 chrUextra 20837167 20837841 -8166815 + PROTOP DNA P 149 753 -3727 1 743 1037 191 33 15 chrUextra 20837941 20838602 -8166054 + SAR_DM Satellite Satellite 1 672 -680 1 743 5560 28 0 0 chrUextra 20838715 20839389 -8165267 - STALKER4_I LTR Gypsy -2740 3790 3117 1 743 2143 84 3 6 chrUextra 20839850 20840163 -8164493 - CIRCE LINE Composite -1376 4980 4669 1 92 5610 21 3 18 chrUextra 20840263 20840937 -8163719 + BATUMI_I LTR Pao 1295 1958 -6005 1 744 5626 0 31 3 chrUextra 20841037 20841711 -8162945 + ROO_I LTR Pao 189 881 -7375 1 744 3230 157 25 16 chrUextra 20841813 20842485 -8162171 - SAR_DM Satellite Satellite -539 933 256 1 744 2119 0 0 0 chrUextra 20842585 20842820 -8161836 + R2_DM LINE R2 3373 3607 0 1 744 689 26 0 0 chrUextra 20842819 20842897 -8161759 + LSU-rRNA_Dme rRNA rRNA 2578 2655 -1245 1 744 927 10 0 0 chrUextra 20842897 20842999 -8161657 + R1_DM LINE R1 5255 5356 0 1 744 2383 4 0 0 chrUextra 20842997 20843259 -8161397 + LSU-rRNA_Dme rRNA rRNA 2640 2901 -999 1 744 6044 0 3 3 chrUextra 20843359 20844033 -8160623 + SSU-rRNA_Dme rRNA rRNA 829 1502 -493 1 744 3213 169 8 8 chrUextra 20844147 20844803 -8159853 - SAR_DM Satellite Satellite -418 1054 399 1 744 694 12 12 0 chrUextra 20844907 20844988 -8159668 + BATUMI_I LTR Pao 7203 7284 -679 1 744 2946 100 82 40 chrUextra 20844988 20845563 -8159093 + BATUMI_I LTR Pao 1 599 -7364 1 744 1006 201 4 8 chrUextra 20845681 20845917 -8158739 + SAR_DM Satellite Satellite 516 750 -722 1 744 3513 12 0 12 chrUextra 20845925 20846340 -8158316 - DOC2_DM LINE Jockey 0 4793 4384 1 744 21 89 0 0 chrUextra 20846824 20846880 -8157776 + AT_rich Low_complexity Low_complexity 1 56 0 1 744 2069 9 0 0 chrUextra 20846899 20847129 -8157527 - SSU-rRNA_Dme rRNA rRNA 0 1995 1766 1 744 5833 0 0 1 chrUextra 20847229 20847903 -8156753 + ROO_I LTR Pao 760 1432 -6824 1 744 6036 5 1 0 chrUextra 20848004 20848677 -8155979 - R1_DM LINE R1 -1549 3807 3134 1 744 1125 0 0 0 chrUextra 20848777 20848902 -8155754 + (CAAAA)n Simple_repeat Simple_repeat 2 126 0 1 744 2935 196 14 22 chrUextra 20849551 20850225 -8154431 + SAR_DM Satellite Satellite 1 668 -203 1 744 3034 166 16 24 chrUextra 20851103 20851771 -8152885 + SAR_DM Satellite Satellite 247 909 -563 1 744 6102 0 3 0 chrUextra 20851874 20852545 -8152111 - SSU-rRNA_Dme rRNA rRNA -15 1980 1308 1 744 1397 6 21 16 chrUextra 20852645 20852831 -8151825 + NTS_DM Other Other 54 240 0 1 744 1921 4 17 13 chrUextra 20852831 20853070 -8151586 + NTS_DM Other Other 1 240 0 1 744 1896 4 17 17 chrUextra 20853070 20853310 -8151346 + NTS_DM Other Other 1 240 0 1 744 475 27 13 13 chrUextra 20853418 20853493 -8151163 + NTS_DM Other Other 127 201 -39 1 744 907 9 0 27 chrUextra 20853545 20853657 -8150999 + NTS_DM Other Other 25 133 -107 1 744 1304 18 0 6 chrUextra 20853657 20853822 -8150834 + NTS_DM Other Other 38 201 -39 1 744 21 57 0 0 chrUextra 20853822 20853857 -8150799 + AT_rich Low_complexity Low_complexity 1 35 0 1 744 870 9 9 27 chrUextra 20853883 20853994 -8150662 + NTS_DM Other Other 25 133 -107 1 744 828 10 0 0 chrUextra 20853994 20854090 -8150566 + NTS_DM Other Other 38 133 -107 1 744 3043 172 13 24 chrUextra 20854191 20854864 -8149792 + SAR_DM Satellite Satellite 436 1101 -371 1 744 2473 249 11 8 chrUextra 20854975 20855636 -8149020 + TOM_I LTR Gypsy 4731 5393 -719 1 744 1296 43 108 5 chrUextra 20855737 20855922 -8148734 + G4_DM LINE Jockey 2750 2953 -903 1 744 455 70 0 0 chrUextra 20855904 20855961 -8148695 + G4_DM LINE Jockey 3117 3173 -683 1 744 3238 55 88 2 chrUextra 20855955 20856410 -8148246 + G4_DM LINE Jockey 3329 3822 -34 1 744 3234 63 19 9 chrUextra 20856510 20856943 -8147713 + R1_DM LINE R1 1808 2244 -3112 1 744 681 31 219 0 chrUextra 20857017 20857113 -8147543 - Gypsy6A_LTR LTR Gypsy -233 187 71 1 744 341 135 0 0 chrUextra 20857131 20857183 -8147473 + R1_DM LINE R1 1 52 -5304 1 744 414 39 0 0 chrUextra 20857283 20857335 -8147321 + (TTCTC)n Simple_repeat Simple_repeat 5 56 0 1 744 2075 118 24 72 chrUextra 20858060 20858479 -8146177 + TART LINE telomeric 2964 3362 -11115 1 744 1422 134 14 27 chrUextra 20858474 20858727 -8145929 + TART LINE telomeric 3683 3919 -10558 1 744 1513 25 0 104 chrUextra 20858829 20859050 -8145606 + DIVER2_I LTR Pao 1378 1575 -2572 1 744 3521 35 9 0 chrUextra 20859027 20859452 -8145204 + DIVER2_I LTR Pao 3719 4147 0 1 744 441 20 0 0 chrUextra 20859452 20859501 -8145155 + DIVER2_LTR LTR Pao 1 49 -336 1 744 3057 170 21 11 chrUextra 20859602 20860268 -8144388 - SAR_DM Satellite Satellite -554 918 246 1 744 836 107 0 0 chrUextra 20860375 20860506 -8144150 - ARS406_DM Unknown Unknown -222 131 1 1 744 3068 176 5 6 chrUextra 20860413 20861047 -8143609 + SAR_DM Satellite Satellite 195 827 -645 1 744 21 89 0 0 chrUextra 20861585 20861641 -8143015 + AT_rich Low_complexity Low_complexity 1 56 0 1 744 1477 0 0 0 chrUextra 20861660 20861821 -8142835 - SSU-rRNA_Dme rRNA rRNA 0 1995 1835 1 744 5669 15 10 0 chrUextra 20861921 20862594 -8142062 + Gypsy4_I LTR Gypsy 4313 4992 -1296 1 744 5508 24 45 3 chrUextra 20862694 20863367 -8141289 - R1_DM LINE R1 -1011 4345 3645 1 744 3015 177 10 22 chrUextra 20863467 20864138 -8140518 + SAR_DM Satellite Satellite 428 1090 -382 1 744 386 96 0 14 chrUextra 20864830 20864904 -8139752 + (CATGT)n Simple_repeat Simple_repeat 4 76 0 1 744 1213 0 0 0 chrUextra 20865016 20865149 -8139507 - FW_DM LINE Jockey -837 3855 3723 1 744 280 119 0 243 chrUextra 20865150 20865261 -8139395 + Gypsy2_I LTR Gypsy 595 678 -5457 1 744 21 0 0 0 chrUextra 20865566 20865587 -8139069 + AT_rich Low_complexity Low_complexity 1 21 0 1 744 5813 12 0 0 chrUextra 20865786 20866459 -8138197 - IDEFIX_I LTR Gypsy -3103 2525 1853 1 744 3208 176 9 9 chrUextra 20866559 20867231 -8137425 + SAR_DM Satellite Satellite 390 1061 -411 1 744 496 0 18 0 chrUextra 20867332 20867389 -8137267 - ROO_I LTR Pao -2844 5412 5355 1 744 5464 5 0 0 chrUextra 20867376 20868005 -8136651 + ROO_I LTR Pao 2913 3541 -4715 1 744 2582 240 27 36 chrUextra 20868105 20869551 -8135105 + SAR_DM Satellite Satellite 1 1432 -396 1 744 622 164 8 0 chrUextra 20869653 20869775 -8134881 - SAR_DM Satellite Satellite -670 802 680 1 744 2546 169 9 13 chrUextra 20869786 20870324 -8134332 - SAR_DM Satellite Satellite -479 993 458 1 744 5985 6 3 0 chrUextra 20870424 20871094 -8133562 - MICROPIA_I LTR Gypsy -3224 1252 581 1 744 2470 104 18 18 chrUextra 20871197 20871868 -8132788 - DMSAT6 Satellite Satellite -37 671 1 1 744 531 190 0 0 chrUextra 20872506 20872643 -8132013 + (CATAA)n Simple_repeat Simple_repeat 2 138 0 1 744 6110 1 1 0 chrUextra 20872745 20873416 -8131240 - SSU-rRNA_Dme rRNA rRNA 0 1995 1324 1 744 3438 156 9 9 chrUextra 20873521 20874189 -8130467 - SAR_DM Satellite Satellite -425 1047 380 1 744 4712 63 46 40 chrUextra 20874289 20874962 -8129694 - CIRCE LINE Composite -5435 921 245 1 744 367 74 0 0 chrUextra 20875062 20875116 -8129540 + QUASIMODO_I LTR Gypsy 5122 5175 -885 1 744 1724 38 0 0 chrUextra 20875125 20875362 -8129294 + QUASIMODO_I LTR Gypsy 5491 5727 -333 1 744 1036 163 67 50 chrUextra 20875456 20875735 -8128921 + QUASIMODO_LTR LTR Gypsy 63 480 -178 1 744 22 56 0 0 chrUextra 20877439 20877475 -8127181 + AT_rich Low_complexity Low_complexity 1 36 0 1 744 269 125 0 0 chrUextra 20877488 20877528 -8127128 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 744 236 175 0 0 chrUextra 20877571 20877611 -8127045 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 744 262 150 0 0 chrUextra 20877663 20877703 -8126953 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 744 262 150 0 0 chrUextra 20877755 20877795 -8126861 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 744 22 56 0 0 chrUextra 20877800 20877836 -8126820 + AT_rich Low_complexity Low_complexity 1 36 0 1 744 1329 0 0 0 chrUextra 20877908 20878054 -8126602 - LSU-rRNA_Dme rRNA rRNA 0 3900 3755 1 744 3039 137 14 12 chrUextra 20878154 20878770 -8125886 + Gypsy2_I LTR Gypsy 1375 2044 -4968 1 744 2863 172 43 13 chrUextra 20878928 20879599 -8125057 - SAR_DM Satellite Satellite -500 972 282 1 744 913 28 0 0 chrUextra 20879700 20879807 -8124849 - LSU-rRNA_Dme rRNA rRNA -1211 2689 2583 1 744 4238 34 10 0 chrUextra 20879799 20880306 -8124350 - R2_DM LINE R2 -2 3605 3094 1 744 596 0 0 0 chrUextra 20880305 20880373 -8124283 - R2_DM LINE R2 -646 2961 2894 1 744 6027 0 0 5 chrUextra 20880473 20881146 -8123510 + HMSBEAGLE_I LTR Gypsy 972 1641 -4888 1 744 2939 182 25 9 chrUextra 20881250 20881919 -8122737 - SAR_DM Satellite Satellite -581 891 212 1 744 3174 185 7 6 chrUextra 20882019 20882692 -8121964 - SAR_DM Satellite Satellite -543 929 256 1 744 1817 234 140 6 chrUextra 20882825 20883454 -8121202 + BS LINE Jockey 2021 2733 -2393 1 744 3346 168 8 8 chrUextra 20883571 20884238 -8120418 - SAR_DM Satellite Satellite -425 1047 381 1 744 2930 179 9 21 chrUextra 20884338 20885011 -8119645 + SAR_DM Satellite Satellite 446 1110 -362 1 744 586 52 0 0 chrUextra 20885112 20885189 -8119467 + ARS406_DM Unknown Unknown 83 159 -194 1 744 2836 160 18 7 chrUextra 20885195 20885761 -8118895 - SAR_DM Satellite Satellite -569 903 332 1 744 2321 205 72 35 chrUextra 20885885 20886552 -8118104 - Gypsy12_LTR LTR Gypsy -250 2086 1395 1 744 5848 22 7 0 chrUextra 20886658 20887330 -8117326 + R2_DM LINE R2 1894 2570 -1037 1 744 2101 180 81 45 chrUextra 20887464 20887998 -8116658 - TAHRE LINE telomeric -2867 7596 7044 1 744 832 57 0 0 chrUextra 20887997 20888103 -8116553 - TAHRE LINE telomeric -12 10451 10346 1 744 1813 21 17 17 chrUextra 20888243 20888483 -8116173 + NTS_DM Other Other 1 240 0 1 744 1835 17 17 17 chrUextra 20888483 20888723 -8115933 + NTS_DM Other Other 1 240 0 1 744 1251 20 0 7 chrUextra 20888723 20888876 -8115780 + NTS_DM Other Other 1 152 -88 1 744 5730 19 7 6 chrUextra 20888976 20889649 -8115007 + FW_DM LINE Jockey 3820 4493 -199 1 744 2043 43 16 0 chrUextra 20889749 20890002 -8114654 - DIVER2_I LTR Pao -172 3975 3719 1 744 1610 29 0 99 chrUextra 20889979 20890212 -8114444 - DIVER2_I LTR Pao -2572 1575 1366 1 744 23 0 0 0 chrUextra 20890356 20890379 -8114277 + AT_rich Low_complexity Low_complexity 1 23 0 1 744 554 194 24 16 chrUextra 20891445 20891571 -8113085 - HETRP_DM Satellite Satellite -197 1675 1549 1 744 192 40 0 0 chrUextra 20891571 20891596 -8113060 + (TC)n Simple_repeat Simple_repeat 2 26 0 1 744 702 186 14 14 chrUextra 20891722 20891869 -8112787 - HETRP_DM Satellite Satellite -197 1675 1529 1 744 381 307 7 7 chrUextra 20892097 20892238 -8112418 + Invader3_I LTR Gypsy 2889 3029 -1859 1 744 6026 10 0 0 chrUextra 20892841 20893514 -8111142 + DM1731_I LTR Copia 1311 1983 -1993 1 744 800 49 0 0 chrUextra 20893615 20893717 -8110939 - BATUMI_I LTR Pao -1435 6528 6427 1 744 3971 68 20 4 chrUextra 20893729 20894287 -8110369 + BATUMI_I LTR Pao 7298 7864 -99 1 744 3030 174 15 19 chrUextra 20894392 20895060 -8109596 - SAR_DM Satellite Satellite -610 862 198 1 744 4649 39 116 18 chrUextra 20895161 20895833 -8108823 - BATUMI_I LTR Pao -5998 1965 1228 1 744 3100 178 9 7 chrUextra 20895933 20896605 -8108051 - SAR_DM Satellite Satellite -588 884 212 1 744 2615 217 24 6 chrUextra 20896706 20897379 -8107277 + SAR_DM Satellite Satellite 195 879 -593 1 744 3182 46 43 169 chrUextra 20897554 20898152 -8106504 + CIRCE LINE Composite 973 1495 -4861 1 744 639 24 12 12 chrUextra 20898252 20898321 -8106335 - DM412B_LTR LTR Gypsy -6518 379 311 1 744 5034 9 2 2 chrUextra 20898321 20898891 -8105765 - DM412B_LTR LTR Gypsy 0 571 2 1 744 5406 0 0 0 chrUextra 20899050 20899698 -8104958 - DM176_I LTR Gypsy 0 6420 5773 1 744 3180 169 11 9 chrUextra 20899802 20900471 -8104185 + SAR_DM Satellite Satellite 192 861 -611 1 744 370 314 27 11 chrUextra 20900580 20900767 -8103889 - XDMR Unknown Unknown -171 190 1 1 744 1238 282 28 27 chrUextra 20900618 20901216 -8103440 + SAR_DM Satellite Satellite 208 806 -666 1 744 5019 70 6 7 chrUextra 20901344 20902017 -8102639 - R1_DM LINE R1 -4605 751 80 1 744 5139 46 13 3 chrUextra 20902117 20902790 -8101866 + MDG1_I LTR Gypsy 1131 1810 -4786 1 744 3048 176 12 6 chrUextra 20903668 20904314 -8100342 - SAR_DM Satellite Satellite -577 895 246 1 744 3268 39 44 0 chrUextra 20904436 20904848 -8099808 + TRANSIB2 DNA Transib 1420 1849 -995 1 744 1658 94 0 4 chrUextra 20904873 20905109 -8099547 + MICROPIA_I LTR Gypsy 3882 4116 -360 1 744 5497 18 1 1 chrUextra 20905209 20905882 -8098774 + QUASIMODO_I LTR Gypsy 4511 5183 -877 1 744 5806 30 0 0 chrUextra 20905982 20906655 -8098001 - MAX_I LTR Pao -3033 4881 4209 1 744 3042 181 10 9 chrUextra 20906758 20907428 -8097228 - SAR_DM Satellite Satellite -593 879 209 1 744 1740 15 0 0 chrUextra 20907528 20907730 -8096926 - QUASIMODO_LTR LTR Gypsy -304 354 153 1 744 3578 15 6 0 chrUextra 20907726 20908201 -8096455 - QUASIMODO_I LTR Gypsy -74 5986 5509 1 744 6092 1 0 1 chrUextra 20908301 20908974 -8095682 + SSU-rRNA_Dme rRNA rRNA 461 1132 -863 1 744 28 48 0 0 chrUextra 20909288 20909330 -8095326 + AT_rich Low_complexity Low_complexity 1 42 0 1 744 32 0 0 0 chrUextra 20909658 20909690 -8094966 + AT_rich Low_complexity Low_complexity 1 32 0 1 744 2995 174 12 11 chrUextra 20909864 20910515 -8094141 - SAR_DM Satellite Satellite -396 1076 425 1 744 2255 176 7 10 chrUextra 20910622 20911277 -8093379 + SAR_DM Satellite Satellite 1 653 -677 1 744 2412 99 18 66 chrUextra 20911399 20912065 -8092591 - DMSAT6 Satellite Satellite 0 634 1 1 744 1725 171 59 56 chrUextra 20912182 20912829 -8091827 + HETA LINE telomeric 1 616 -5465 1 744 394 0 0 162 chrUextra 20912942 20913548 -8091108 + (TATAG)n Simple_repeat Simple_repeat 1 508 0 1 744 5854 6 5 0 chrUextra 20913712 20914385 -8090271 + STALKER4_I LTR Gypsy 1924 2599 -3931 1 744 6143 3 1 0 chrUextra 20914485 20915158 -8089498 + LSU-rRNA_Dme rRNA rRNA 2953 3626 -274 1 744 4726 51 46 0 chrUextra 20915283 20915930 -8088726 + PROTOP DNA P 74 750 -3730 1 744 2739 180 14 27 chrUextra 20916039 20916702 -8087954 - SAR_DM Satellite Satellite -354 1118 465 1 744 1870 176 6 6 chrUextra 20916804 20917477 -8087179 - SAR_DM Satellite Satellite -589 673 1 1 744 5800 22 0 0 chrUextra 20917577 20918250 -8086406 + R1_DM LINE R1 3865 4537 -819 1 744 1071 50 7 0 chrUextra 20918350 20918489 -8086167 - Baggins1 LINE LOA -523 4930 4791 1 744 2928 40 21 19 chrUextra 20918645 20919023 -8085633 - R1_DM LINE R1 -3113 2243 1865 1 744 5270 27 77 0 chrUextra 20919123 20919796 -8084860 - IDEFIX_I LTR Gypsy -4086 1542 818 1 744 911 90 0 0 chrUextra 20919907 20920040 -8084616 - ARS406_DM Unknown Unknown -164 189 57 1 744 2583 179 9 11 chrUextra 20920006 20920569 -8084087 + SAR_DM Satellite Satellite 345 906 -566 1 744 32 0 0 0 chrUextra 20920974 20921006 -8083650 + AT_rich Low_complexity Low_complexity 1 32 0 1 744 1803 5 0 5 chrUextra 20921138 20921342 -8083314 + SSU-rRNA_Dme rRNA rRNA 1 203 -1792 1 744 5553 13 5 0 chrUextra 20921442 20922069 -8082587 + DMRT1B LINE R1 4554 5183 0 1 744 356 0 0 0 chrUextra 20922071 20922115 -8082541 + QUASIMODO_LTR LTR Gypsy 55 98 -560 1 744 5846 22 0 0 chrUextra 20922215 20922888 -8081768 - R1_DM LINE R1 -1566 3790 3118 1 744 6072 1 1 1 chrUextra 20922988 20923661 -8080995 + SSU-rRNA_Dme rRNA rRNA 592 1264 -731 1 744 4693 9 0 0 chrUextra 20924655 20925207 -8079449 + IDEFIX_I LTR Gypsy 4266 4817 -811 1 744 2949 155 8 9 chrUextra 20926160 20926742 -8077914 + Jockey2 LINE Jockey 1419 1820 -1608 1 744 6073 0 1 1 chrUextra 20926853 20927526 -8077130 + DOC LINE Jockey 2246 2918 -1807 1 744 5416 48 1 1 chrUextra 20927626 20928299 -8076357 - R1_DM LINE R1 -4043 1313 641 1 744 5307 2 0 2 chrUextra 20928484 20929072 -8075584 + DMRT1B LINE R1 1 587 -4596 1 744 2883 190 8 8 chrUextra 20929172 20929808 -8074848 - SAR_DM Satellite Satellite -642 830 195 1 744 807 115 0 0 chrUextra 20929715 20929845 -8074811 + ARS406_DM Unknown Unknown 1 130 -223 1 744 4554 30 153 0 chrUextra 20929947 20930618 -8074038 - MAX_I LTR Pao -5579 2335 1562 1 744 1024 30 0 0 chrUextra 20930718 20930849 -8073807 - NTS_DM Other Other -72 168 38 1 744 907 9 0 27 chrUextra 20930849 20930961 -8073695 - NTS_DM Other Other -107 133 25 1 744 1304 18 0 6 chrUextra 20931013 20931178 -8073478 - NTS_DM Other Other -39 201 38 1 744 907 9 0 27 chrUextra 20931178 20931290 -8073366 - NTS_DM Other Other -107 133 25 1 744 22 56 0 0 chrUextra 20931316 20931352 -8073304 + AT_rich Low_complexity Low_complexity 1 36 0 1 744 1958 174 9 9 chrUextra 20931491 20932164 -8072492 + SAR_DM Satellite Satellite 1 672 -677 1 744 5781 9 0 12 chrUextra 20932264 20932937 -8071719 - DM176_I LTR Gypsy -3235 3185 2521 1 744 28 48 0 0 chrUextra 20933330 20933372 -8071284 + AT_rich Low_complexity Low_complexity 1 42 0 1 744 310 82 0 20 chrUextra 20933953 20934003 -8070653 - HMSBEAGLE_I LTR Gypsy -6308 221 173 1 744 230 105 0 0 chrUextra 20934029 20934067 -8070589 - HMSBEAGLE_I LTR Gypsy -6491 38 1 1 744 978 173 102 15 chrUextra 20934066 20934271 -8070385 - DMLTR5 LTR Gypsy 0 266 44 1 744 2466 206 12 37 chrUextra 20934584 20935256 -8069400 - SAR_DM Satellite Satellite -361 1111 457 1 744 5744 15 5 0 chrUextra 20936902 20937575 -8067081 - STALKER4_I LTR Gypsy -3819 2711 2036 1 744 3100 178 8 9 chrUextra 20937676 20938329 -8066327 + SAR_DM Satellite Satellite 425 1076 -396 1 744 5827 1 0 3 chrUextra 20938448 20939121 -8065535 - LSU-rRNA_Dme rRNA rRNA -2946 954 284 1 744 946 178 102 15 chrUextra 20939343 20939548 -8065108 + DMLTR5 LTR Gypsy 44 266 0 1 744 372 49 65 16 chrUextra 20939547 20939609 -8065047 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 1 744 259 128 0 21 chrUextra 20939631 20939679 -8064977 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 744 234 0 0 0 chrUextra 20939864 20939890 -8064766 + (T)n Simple_repeat Simple_repeat 1 26 0 1 744 3165 180 7 7 chrUextra 20939994 20940667 -8063989 - SAR_DM Satellite Satellite -594 878 206 1 744 1554 263 60 9 chrUextra 20940767 20941438 -8063218 - Invader6_I LTR Gypsy -1779 2320 1102 1 744 204 40 0 0 chrUextra 20941691 20941716 -8062940 + (TTG)n Simple_repeat Simple_repeat 2 26 0 1 744 1841 49 0 0 chrUextra 20941916 20942142 -8062514 + PROTOP DNA P 74 299 -4181 1 744 448 27 68 0 chrUextra 20942129 20942203 -8062453 + PROTOP DNA P 522 600 -3880 1 744 25 0 0 0 chrUextra 20942606 20942631 -8062025 + AT_rich Low_complexity Low_complexity 1 25 0 1 744 1342 12 6 6 chrUextra 20942820 20942986 -8061670 - IDEFIX_LTR LTR Gypsy 0 594 429 1 744 3075 175 9 9 chrUextra 20943112 20943759 -8060897 - SAR_DM Satellite Satellite -397 1075 429 1 744 5558 16 0 0 chrUextra 20944632 20945305 -8059351 + FW_DM LINE Jockey 2300 2972 -1720 1 744 2175 89 5 39 chrUextra 20945406 20946073 -8058583 - DMSAT6 Satellite Satellite -153 643 1 1 744 2766 181 24 6 chrUextra 20946181 20946838 -8057818 + SAR_DM Satellite Satellite 407 1075 -397 1 744 5219 3 0 2 chrUextra 20946951 20947563 -8057093 - FW_DM LINE Jockey -4081 611 1 1 744 5217 2 2 0 chrUextra 20947724 20948326 -8056330 - LSU-rRNA_Dme rRNA rRNA -1510 2390 1788 1 744 3135 24 5 44 chrUextra 20948734 20949170 -8055486 + CIRCE LINE Composite 4981 5399 -957 1 744 4904 37 128 6 chrUextra 20949270 20949943 -8054713 - BATUMI_I LTR Pao -2295 5668 4914 1 744 4788 2 0 0 chrUextra 20950043 20950604 -8054052 + ROO_I LTR Pao 5471 6031 -2225 1 744 1008 9 0 0 chrUextra 20950600 20950716 -8053940 + ROO_I LTR Pao 7473 7588 -668 1 744 5741 6 0 0 chrUextra 20950816 20951489 -8053167 - DMRT1A LINE R1 -3309 1874 1202 1 744 2758 176 19 24 chrUextra 20951589 20952259 -8052397 - SAR_DM Satellite Satellite -597 875 209 1 744 21 57 0 0 chrUextra 20952425 20952460 -8052196 + AT_rich Low_complexity Low_complexity 1 35 0 1 744 4342 0 6 0 chrUextra 20952532 20953035 -8051621 - LSU-rRNA_Dme rRNA rRNA 0 3900 3395 1 744 5788 1 9 0 chrUextra 20953135 20953808 -8050848 - Copia2_I LTR Copia -2932 1230 552 1 744 5738 0 0 1 chrUextra 20953908 20954581 -8050075 + LSU-rRNA_Dme rRNA rRNA 509 1180 -2720 1 744 348 214 24 0 chrUextra 20954703 20954787 -8049869 + HOBO DNA hAT 194 279 -2737 1 744 2460 41 84 0 chrUextra 20954811 20955155 -8049501 + PROTOP_B DNA P 1 373 -780 1 744 998 58 17 0 chrUextra 20955181 20955354 -8049302 + PROTOP DNA P 541 717 -3763 1 744 920 63 6 19 chrUextra 20955473 20956127 -8048529 + RSP Satellite Satellite 1 645 0 1 744 980 305 25 30 chrUextra 20956256 20956872 -8047784 + BLOOD_I LTR Gypsy 1799 2465 -4148 1 744 5582 0 1 5 chrUextra 20957773 20958425 -8046231 + SSU-rRNA_Dme rRNA rRNA 855 1504 -491 1 744 400 57 0 0 chrUextra 20958546 20958599 -8046057 - DMCR1A LINE CR1 -3336 1134 1082 1 744 269 279 13 0 chrUextra 20959111 20959204 -8045452 - Gypsy5_I LTR Gypsy -3597 2912 2836 1 744 228 152 0 0 chrUextra 20959319 20959365 -8045291 - ARS406_DM Unknown Unknown -307 46 1 1 744 2946 178 8 8 chrUextra 20959325 20959983 -8044673 + SAR_DM Satellite Satellite 246 903 -569 1 744 5760 0 1 5 chrUextra 20960092 20960765 -8043891 - SSU-rRNA_Dme rRNA rRNA -480 1515 845 1 744 5677 0 9 0 chrUextra 20960865 20961538 -8043118 - ROO_I LTR Pao -3801 4455 3777 1 744 1620 0 0 0 chrUextra 20962131 20962311 -8042345 + (TTA)n Simple_repeat Simple_repeat 1 180 0 1 744 4561 0 0 0 chrUextra 20962411 20962934 -8041722 + R1_DM LINE R1 4834 5356 0 1 744 1313 7 0 0 chrUextra 20962932 20963084 -8041572 + LSU-rRNA_Dme rRNA rRNA 2640 2791 -1109 1 744 5890 0 0 1 chrUextra 20963184 20963857 -8040799 + SSU-rRNA_Dme rRNA rRNA 236 907 -1088 1 744 5803 3 1 1 chrUextra 20963957 20964630 -8040026 - SSU-rRNA_Dme rRNA rRNA -775 1220 548 1 744 3023 173 9 6 chrUextra 20964739 20965403 -8039253 - SAR_DM Satellite Satellite -577 895 230 1 744 2793 184 26 8 chrUextra 20965515 20966176 -8038480 - SAR_DM Satellite Satellite -396 1076 404 1 744 488 119 36 0 chrUextra 20966548 20966632 -8038024 - NTS_DM Other Other -150 90 4 1 744 1301 6 0 18 chrUextra 20966742 20966907 -8037749 - NTS_DM Other Other -78 162 1 1 744 5800 3 1 0 chrUextra 20967049 20967722 -8036934 - DOC LINE Jockey -900 3825 3152 1 744 349 138 0 0 chrUextra 20967839 20967897 -8036759 - HETRP_DM Satellite Satellite -286 1586 1529 1 744 584 214 7 14 chrUextra 20968039 20968181 -8036475 - HETRP_DM Satellite Satellite -203 1669 1529 1 744 487 240 0 16 chrUextra 20968331 20968454 -8036202 - HETRP_DM Satellite Satellite -203 1669 1549 1 744 336 24 0 0 chrUextra 20968454 20968495 -8036161 + (TC)n Simple_repeat Simple_repeat 2 42 0 1 744 28 48 0 0 chrUextra 20968816 20968858 -8035798 + AT_rich Low_complexity Low_complexity 1 42 0 1 744 465 131 36 0 chrUextra 20969131 20969215 -8035441 - NTS_DM Other Other -150 90 4 1 744 246 150 0 0 chrUextra 20969387 20969427 -8035229 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 744 29 28 0 0 chrUextra 20969432 20969468 -8035188 + AT_rich Low_complexity Low_complexity 1 36 0 1 744 4375 0 2 0 chrUextra 20969541 20970041 -8034615 - LSU-rRNA_Dme rRNA rRNA 0 3900 3400 1 744 5747 18 0 0 chrUextra 20970141 20970814 -8033842 - R2_DM LINE R2 -2033 1574 902 1 744 488 119 36 0 chrUextra 20970961 20971045 -8033611 - NTS_DM Other Other -150 90 4 1 744 1301 6 0 18 chrUextra 20971155 20971320 -8033336 - NTS_DM Other Other -78 162 1 1 11 1829 8 17 13 chrUextra 20971320 20971559 -8033097 - NTS_DM Other Other 0 240 1 1 745 745 97 8 0 chrUextra 20971687 20971811 -8032845 - ARS406_DM Unknown Unknown -228 125 1 1 745 2841 174 14 9 chrUextra 20971705 20972360 -8032296 + SAR_DM Satellite Satellite 180 837 -635 1 745 216 0 0 0 chrUextra 20972883 20972907 -8031749 + (TA)n Simple_repeat Simple_repeat 1 24 0 1 745 472 184 12 101 chrUextra 20972917 20973086 -8031570 + TOM_I LTR Gypsy 1 154 -5958 1 745 5694 1 5 6 chrUextra 20973232 20973904 -8030752 - SSU-rRNA_Dme rRNA rRNA -319 1676 1006 1 745 4918 60 12 6 chrUextra 20974004 20974675 -8029981 - R1_DM LINE R1 -3172 2184 1510 1 745 2815 169 32 20 chrUextra 20974780 20975444 -8029212 + SAR_DM Satellite Satellite 224 895 -577 1 745 1330 137 4 4 chrUextra 20975548 20975782 -8028874 + TART LINE telomeric 3650 3883 -10594 1 745 2653 100 4 57 chrUextra 20975762 20976218 -8028438 + TART LINE telomeric 5323 5754 -8723 1 745 1708 0 0 0 chrUextra 20976320 20976517 -8028139 - LSU-rRNA_Dme rRNA rRNA -3703 197 1 1 745 21 95 0 0 chrUextra 20976529 20976592 -8028064 + AT_rich Low_complexity Low_complexity 1 63 0 1 745 34 24 0 0 chrUextra 20976805 20976846 -8027810 + AT_rich Low_complexity Low_complexity 1 41 0 1 745 3685 74 9 0 chrUextra 20977092 20977764 -8026892 - DM297_I LTR Gypsy -2743 3424 2709 1 745 4840 3 0 2 chrUextra 20977864 20978433 -8026223 - QUASIMODO_LTR LTR Gypsy -90 568 1 1 745 777 48 0 0 chrUextra 20978433 20978536 -8026120 - QUASIMODO_I LTR Gypsy 0 6060 5958 1 745 27 62 0 0 chrUextra 20978757 20978805 -8025851 + AT_rich Low_complexity Low_complexity 1 48 0 1 745 499 259 24 12 chrUextra 20978852 20979019 -8025637 - Copia_I LTR Copia -266 4327 4159 1 745 622 216 45 79 chrUextra 20979019 20979286 -8025370 - ROVER-LTR_DM LTR Gypsy 0 367 110 1 745 5750 0 0 0 chrUextra 20979408 20980080 -8024576 - ROO_I LTR Pao -1548 6708 6037 1 745 2113 97 132 21 chrUextra 20980192 20980679 -8023977 - Invader2_I LTR Gypsy -567 4025 3419 1 745 1245 47 18 0 chrUextra 20980679 20980850 -8023806 + IDEFIX_LTR LTR Gypsy 1 174 -420 1 745 5656 0 0 1 chrUextra 20980952 20981624 -8023032 - LSU-rRNA_Dme rRNA rRNA -2876 1024 354 1 745 5445 3 18 0 chrUextra 20981724 20982396 -8022260 + MDG1_I LTR Gypsy 1053 1736 -4860 1 745 5446 27 1 0 chrUextra 20982496 20983168 -8021488 - R1_DM LINE R1 -2401 2955 2283 1 745 2853 179 9 9 chrUextra 20983269 20983933 -8020723 - SAR_DM Satellite Satellite -614 858 195 1 745 5537 6 0 0 chrUextra 20984040 20984712 -8019944 + QUASIMODO_I LTR Gypsy 972 1643 -4417 1 745 5830 0 5 0 chrUextra 20984812 20985484 -8019172 + DOC LINE Jockey 3213 3887 -838 1 745 5256 36 1 7 chrUextra 20985584 20986256 -8018400 + MAX_I LTR Pao 2529 3196 -4718 1 745 5697 0 0 0 chrUextra 20986356 20987028 -8017628 + DM176_I LTR Gypsy 722 1393 -5027 1 745 2905 35 5 11 chrUextra 20987128 20987506 -8017150 - BATUMI_I LTR Pao -5590 2373 1998 1 745 838 0 10 0 chrUextra 20987506 20987606 -8017050 - DM1731_I LTR Copia -3875 101 1 1 745 1287 57 0 6 chrUextra 20987606 20987781 -8016875 - DM1731_LTR LTR Copia 0 336 163 1 745 615 96 11 0 chrUextra 20987900 20987994 -8016662 - R1_DM LINE R1 -5261 95 1 1 745 4477 24 2 0 chrUextra 20988027 20988572 -8016084 - R1_DM LINE R1 0 5356 4811 1 745 2298 116 17 13 chrUextra 20988672 20989310 -8015346 + DMSAT6 Satellite Satellite 1 640 -40 1 745 1369 158 18 21 chrUextra 20989830 20990114 -8014542 - PROTOP_B DNA P -4 1149 867 1 745 460 176 392 0 chrUextra 20990222 20990431 -8014225 + PROTOP DNA P 3959 4248 -232 1 745 280 291 131 13 chrUextra 20990575 20990728 -8013928 - MICROPIA_I LTR Gypsy -638 3838 3668 1 745 260 297 0 0 chrUextra 20990814 20990888 -8013768 - MICROPIA_I LTR Gypsy -682 3794 3721 1 745 1331 65 5 0 chrUextra 20990988 20991172 -8013484 - R1_DM LINE R1 -5171 185 1 1 745 3721 31 0 0 chrUextra 20991205 20991660 -8012996 - R1_DM LINE R1 0 5356 4902 1 745 2660 171 48 21 chrUextra 20991765 20992432 -8012224 + SAR_DM Satellite Satellite 321 1005 -467 1 745 2478 81 18 22 chrUextra 20992532 20993204 -8011452 - DMSAT6 Satellite Satellite -42 668 1 1 745 3922 59 58 27 chrUextra 20993309 20993976 -8010680 + STALKER4_I LTR Gypsy 872 1559 -4971 1 745 3841 15 0 0 chrUextra 20994076 20994531 -8010125 + MICROPIA_I LTR Gypsy 1237 1691 -2785 1 745 1828 9 0 0 chrUextra 20994536 20994748 -8009908 + MICROPIA_I LTR Gypsy 1876 2087 -2389 1 745 5472 10 0 1 chrUextra 20994848 20995520 -8009136 + STALKER4_I LTR Gypsy 2713 3383 -3147 1 745 5147 45 1 1 chrUextra 20995620 20996292 -8008364 - R1_DM LINE R1 -4064 1292 621 1 745 616 124 0 0 chrUextra 20996392 20996497 -8008159 - ARS406_DM Unknown Unknown -248 105 1 1 745 2860 177 15 9 chrUextra 20996404 20997064 -8007592 + SAR_DM Satellite Satellite 195 858 -614 1 745 5553 1 0 5 chrUextra 20997164 20997836 -8006820 + STALKER4_I LTR Gypsy 1180 1848 -4682 1 745 2912 176 11 9 chrUextra 20997937 20998606 -8006050 - SAR_DM Satellite Satellite -581 891 222 1 745 3064 159 8 14 chrUextra 20998718 20999380 -8005276 + SAR_DM Satellite Satellite 195 852 -620 1 745 1368 195 119 25 chrUextra 20999482 20999919 -8004737 + Gypsy12_LTR LTR Gypsy 1173 1650 -686 1 745 413 285 21 0 chrUextra 21000004 21000148 -8004508 + Gypsy12_LTR LTR Gypsy 1737 1883 -453 1 745 5883 9 1 0 chrUextra 21000252 21000924 -8003732 - MDG3_I LTR Gypsy -1445 3541 2869 1 745 455 271 51 50 chrUextra 21001380 21001423 -8003233 + Gypsy4_I LTR Gypsy 2576 2708 -3459 1 745 1609 9 24 0 chrUextra 21001423 21001636 -8003020 + TLD2 Unknown Unknown 1 218 0 1 745 455 271 51 50 chrUextra 21001636 21001696 -8002960 + Gypsy4_I LTR Gypsy 2709 2904 -3263 1 745 5977 0 0 1 chrUextra 21001796 21002468 -8002188 + MDG3_I LTR Gypsy 3026 3696 -1290 1 745 5656 5 18 1 chrUextra 21002568 21003240 -8001416 + MDG1_I LTR Gypsy 934 1616 -4980 1 745 5822 9 0 0 chrUextra 21003340 21004012 -8000644 - ROO_I LTR Pao -4432 3824 3153 1 745 787 92 8 0 chrUextra 21004112 21004232 -8000424 - ARS406_DM Unknown Unknown -232 121 1 1 745 2818 196 8 8 chrUextra 21004137 21004784 -7999872 + SAR_DM Satellite Satellite 192 838 -634 1 745 3063 187 16 6 chrUextra 21004884 21005556 -7999100 - SAR_DM Satellite Satellite -539 933 255 1 745 385 43 0 0 chrUextra 21005656 21005702 -7998954 + PROTOP_B DNA P 110 155 -998 1 745 4681 82 5 13 chrUextra 21005700 21006327 -7998329 + Gypsy12_I LTR Gypsy 4657 5278 -268 1 745 998 290 69 41 chrUextra 21006428 21007035 -7997621 + Copia2_I LTR Copia 1037 1660 -2502 1 745 5456 25 85 0 chrUextra 21007200 21007872 -7996784 - R1_DM LINE R1 -612 4744 4016 1 745 5259 48 6 1 chrUextra 21007972 21008644 -7996012 + HETA LINE telomeric 4014 4688 -1393 1 745 5636 19 0 3 chrUextra 21009516 21010188 -7994468 + CIRCE LINE Composite 4107 4776 -1580 1 745 5270 38 1 15 chrUextra 21010288 21010960 -7993696 - BATUMI_I LTR Pao -4678 3285 2623 1 745 6045 1 0 1 chrUextra 21011064 21011732 -7992924 + LSU-rRNA_Dme rRNA rRNA 1788 2454 -1446 1 745 2264 37 4 0 chrUextra 21011833 21012104 -7992552 + PROTOP_B DNA P 889 1153 0 1 745 29 60 0 0 chrUextra 21012446 21012496 -7992160 + AT_rich Low_complexity Low_complexity 1 50 0 1 745 3684 59 43 0 chrUextra 21012604 21013119 -7991537 + PROTOP_A DNA P 578 1105 0 1 745 384 58 0 0 chrUextra 21013382 21013434 -7991222 + PROTOP_A DNA P 249 300 -805 1 745 3289 57 73 0 chrUextra 21013421 21014048 -7990608 + PROTOP_A DNA P 520 1057 -48 1 745 558 214 0 8 chrUextra 21014153 21014271 -7990385 - HETRP_DM Satellite Satellite -227 1645 1529 1 745 678 193 14 14 chrUextra 21014433 21014580 -7990076 - HETRP_DM Satellite Satellite -197 1675 1529 1 745 357 226 11 21 chrUextra 21014725 21014820 -7989836 - HETRP_DM Satellite Satellite -208 1664 1571 1 745 949 87 196 7 chrUextra 21014921 21015167 -7989489 + PROTOP_B DNA P 356 693 -460 1 745 517 36 84 0 chrUextra 21015162 21015245 -7989411 + PROTOP DNA P 770 859 -3621 1 745 2404 98 0 3 chrUextra 21015253 21015592 -7989064 - Jockey2 LINE Jockey -1608 1820 1483 1 745 21 57 0 0 chrUextra 21015940 21015975 -7988681 + AT_rich Low_complexity Low_complexity 1 35 0 1 745 21 89 0 0 chrUextra 21016013 21016069 -7988587 + AT_rich Low_complexity Low_complexity 1 56 0 1 745 2523 95 25 46 chrUextra 21016471 21017122 -7987534 - DMSAT6 Satellite Satellite -37 637 1 1 745 1608 181 9 19 chrUextra 21017280 21017596 -7987060 + DM176_I LTR Gypsy 3969 4281 -2139 1 745 1166 29 0 0 chrUextra 21017595 21017732 -7986924 - DMCR1A LINE CR1 -3534 936 800 1 745 794 54 80 0 chrUextra 21017730 21017842 -7986814 - DMCR1A LINE CR1 -4063 407 287 1 745 319 62 42 0 chrUextra 21017860 21017908 -7986748 - DMCR1A LINE CR1 -4152 318 269 1 745 5608 12 72 6 chrUextra 21018008 21018678 -7985978 - FW_DM LINE Jockey -513 4179 3466 1 745 1448 80 8 23 chrUextra 21018780 21019036 -7985620 + DMSAT6 Satellite Satellite 187 438 -32 1 745 3806 25 0 0 chrUextra 21019552 21019997 -7984659 - R1_DM LINE R1 -2518 2838 2394 1 745 1888 22 9 0 chrUextra 21019999 21020224 -7984432 - R1_DM LINE R1 -3291 2065 1839 1 745 3084 179 8 8 chrUextra 21020325 21020980 -7983676 + SAR_DM Satellite Satellite 422 1076 -396 1 745 1503 67 3 1 chrUextra 21021103 21021766 -7982890 + (CTATT)n Simple_repeat Simple_repeat 1 663 0 1 745 601 26 0 0 chrUextra 21021868 21021945 -7982711 + NTS_DM Other Other 57 133 -107 1 745 1304 18 0 6 chrUextra 21021945 21022110 -7982546 + NTS_DM Other Other 38 201 -39 1 745 21 57 0 0 chrUextra 21022110 21022145 -7982511 + AT_rich Low_complexity Low_complexity 1 35 0 1 745 870 9 9 27 chrUextra 21022171 21022282 -7982374 + NTS_DM Other Other 25 133 -107 1 745 851 0 0 0 chrUextra 21022282 21022378 -7982278 + NTS_DM Other Other 38 133 -107 1 745 1253 25 0 6 chrUextra 21022378 21022540 -7982116 + NTS_DM Other Other 38 198 -42 1 745 6121 0 0 1 chrUextra 21022640 21023312 -7981344 - BATUMI_I LTR Pao -2389 5574 4904 1 745 3611 26 2 16 chrUextra 21023412 21023846 -7980810 + G5_DM LINE Jockey 4429 4856 0 1 745 842 72 0 18 chrUextra 21023850 21024074 -7980582 - RSP Satellite Satellite -13 220 1 1 745 5290 56 1 11 chrUextra 21024188 21024856 -7979800 + R1_DM LINE R1 1086 1747 -3609 1 745 5888 18 0 0 chrUextra 21024956 21025625 -7979031 - MICROPIA_I LTR Gypsy -2055 2421 1766 1 745 1762 5 14 5 chrUextra 21025731 21025944 -7978712 - NTS_DM Other Other -25 215 1 1 745 1813 21 17 17 chrUextra 21025944 21026184 -7978472 - NTS_DM Other Other 0 240 1 1 745 1584 14 23 19 chrUextra 21026184 21026400 -7978256 - NTS_DM Other Other 0 240 24 1 745 2210 8 0 0 chrUextra 21026500 21026765 -7977891 + DOC LINE Jockey 4460 4724 -1 1 745 1983 173 10 7 chrUextra 21026765 21027172 -7977484 + SAR_DM Satellite Satellite 346 753 -719 1 745 2933 184 8 11 chrUextra 21027292 21027944 -7976712 - SAR_DM Satellite Satellite -396 1076 427 1 745 1858 0 17 17 chrUextra 21028044 21028279 -7976377 - NTS_DM Other Other -5 235 1 1 745 1930 4 17 13 chrUextra 21028279 21028518 -7976138 - NTS_DM Other Other 0 240 1 1 745 1398 21 25 20 chrUextra 21028518 21028716 -7975940 - NTS_DM Other Other 0 240 42 1 745 434 196 0 18 chrUextra 21028817 21028926 -7975730 + XDMR_DM Unknown Unknown 254 360 0 1 745 2614 179 31 26 chrUextra 21028840 21029488 -7975168 - SAR_DM Satellite Satellite -353 1119 469 1 745 4448 80 7 6 chrUextra 21029588 21030250 -7974406 + Gypsy2_I LTR Gypsy 1211 1931 -5081 1 745 5756 21 22 0 chrUextra 21030360 21031032 -7973624 - R1_DM LINE R1 -1637 3719 3033 1 745 5876 12 21 1 chrUextra 21031132 21031804 -7972852 + ACCORD2_I LTR Gypsy 130 814 -6398 1 745 5650 22 16 0 chrUextra 21031904 21032576 -7972080 - DOC2_DM LINE Jockey -1623 3170 2488 1 745 334 93 0 0 chrUextra 21032676 21032730 -7971926 - FB4_DM DNA Tc1 -128 3961 3908 1 745 261 33 0 0 chrUextra 21032739 21032769 -7971887 - Baggins1 LINE LOA -697 4756 4727 1 745 27 29 0 0 chrUextra 21033008 21033042 -7971614 + AT_rich Low_complexity Low_complexity 1 34 0 1 745 698 179 14 20 chrUextra 21033526 21033674 -7970982 + HETRP_DM Satellite Satellite 1529 1675 -197 1 745 426 20 0 0 chrUextra 21033799 21033850 -7970806 + (GA)n Simple_repeat Simple_repeat 2 52 0 1 745 530 238 8 16 chrUextra 21033850 21033978 -7970678 + HETRP_DM Satellite Satellite 1549 1675 -197 1 745 1134 23 0 0 chrUextra 21033990 21034120 -7970536 - Invader1_LTR LTR Gypsy 0 423 294 1 745 5769 22 5 0 chrUextra 21034220 21034892 -7969764 - R1_DM LINE R1 -2152 3204 2530 1 745 781 9 0 28 chrUextra 21034992 21035101 -7969555 + NTS_DM Other Other 57 162 -78 1 745 514 119 36 0 chrUextra 21035211 21035295 -7969361 + NTS_DM Other Other 4 90 -150 1 745 28 48 0 0 chrUextra 21035568 21035610 -7969046 + AT_rich Low_complexity Low_complexity 1 42 0 1 745 1307 12 0 24 chrUextra 21035810 21035976 -7968680 - NTS_DM Other Other -78 162 1 1 745 1926 4 17 13 chrUextra 21035976 21036215 -7968441 - NTS_DM Other Other 0 240 1 1 745 1744 5 18 14 chrUextra 21036215 21036436 -7968220 - NTS_DM Other Other 0 240 19 1 745 434 0 62 46 chrUextra 21036536 21036601 -7968055 + NTS_DM Other Other 175 240 0 1 745 1930 4 17 13 chrUextra 21036601 21036840 -7967816 + NTS_DM Other Other 1 240 0 1 745 1940 0 17 13 chrUextra 21036840 21037079 -7967577 + NTS_DM Other Other 1 240 0 1 745 1136 8 0 0 chrUextra 21037079 21037208 -7967448 + NTS_DM Other Other 1 129 -111 1 745 380 183 0 24 chrUextra 21037308 21037392 -7967264 - HETRP_DM Satellite Satellite -262 1610 1529 1 745 735 199 7 7 chrUextra 21037556 21037703 -7966953 - HETRP_DM Satellite Satellite -197 1675 1529 1 745 439 233 10 10 chrUextra 21037875 21037979 -7966677 - HETRP_DM Satellite Satellite -197 1675 1572 1 745 5510 6 40 0 chrUextra 21038080 21038752 -7965904 + PROTOP_A DNA P 187 885 -220 1 745 6046 0 0 0 chrUextra 21038852 21039524 -7965132 + FW_DM LINE Jockey 2862 3533 -1159 1 745 989 86 9 21 chrUextra 21039634 21040296 -7964360 + RSP Satellite Satellite 1 654 0 1 745 2921 172 34 21 chrUextra 21040399 21041068 -7963588 - SAR_DM Satellite Satellite -549 923 246 1 745 5988 5 1 1 chrUextra 21041168 21041840 -7962816 + DM1731_I LTR Copia 37 708 -3268 1 745 3130 178 8 8 chrUextra 21041943 21042599 -7962057 + SAR_DM Satellite Satellite 282 937 -535 1 745 1946 314 2 2 chrUextra 21042716 21043344 -7961312 - Invader1_I LTR Gypsy -1094 2092 1465 1 745 3064 170 27 11 chrUextra 21043496 21044155 -7960501 + SAR_DM Satellite Satellite 369 1038 -434 1 745 25 0 0 0 chrUextra 21044728 21044753 -7959903 + AT_rich Low_complexity Low_complexity 1 25 0 1 745 5550 37 0 0 chrUextra 21045028 21045700 -7958956 - MDG1_I LTR Gypsy -2554 4042 3371 1 745 2887 178 43 12 chrUextra 21045804 21046470 -7958186 - SAR_DM Satellite Satellite -514 958 272 1 745 5391 24 74 1 chrUextra 21047344 21048016 -7956640 - R1_DM LINE R1 -1045 4311 3591 1 745 2142 141 66 24 chrUextra 21048220 21048788 -7955868 - STALKER4_I LTR Gypsy -5531 999 359 1 745 5880 1 0 0 chrUextra 21048888 21049560 -7955096 - HMSBEAGLE_I LTR Gypsy -5803 726 55 1 745 3555 255 44 29 chrUextra 21049660 21051099 -7953557 - SAR_DM Satellite Satellite -397 1460 1 1 745 4381 2 0 2 chrUextra 21051204 21051690 -7952966 + R1_DM LINE R1 4872 5356 0 1 745 1685 11 0 0 chrUextra 21051688 21051876 -7952780 + LSU-rRNA_Dme rRNA rRNA 2640 2827 -1073 1 745 6021 7 0 1 chrUextra 21051976 21052648 -7952008 + Gypsy2_I LTR Gypsy 5024 5694 -441 1 745 5781 3 1 1 chrUextra 21052748 21053420 -7951236 + IDEFIX_I LTR Gypsy 202 873 -4755 1 745 5580 31 9 1 chrUextra 21053520 21054192 -7950464 - R1_DM LINE R1 -105 5251 4575 1 745 5701 5 0 0 chrUextra 21054292 21054964 -7949692 - IDEFIX_I LTR Gypsy -1034 4594 3923 1 745 869 0 0 10 chrUextra 21055064 21055166 -7949490 + LSU-rRNA_Dme rRNA rRNA 1688 1788 -2112 1 745 4797 2 0 0 chrUextra 21055210 21055736 -7948920 + LSU-rRNA_Dme rRNA rRNA 1788 2313 -1587 1 745 5506 2 0 0 chrUextra 21055836 21056438 -7948218 + LSU-rRNA_Dme rRNA rRNA 2053 2654 -1246 1 745 351 0 0 0 chrUextra 21056467 21056508 -7948148 + R1_DM LINE R1 1 41 -5315 1 745 1587 12 0 0 chrUextra 21056608 21056855 -7947801 + (TAA)n Simple_repeat Simple_repeat 1 247 0 1 745 1609 141 81 12 chrUextra 21056855 21057199 -7947457 + MDG1_LTR LTR Gypsy 45 412 -30 1 745 446 162 0 0 chrUextra 21057200 21057280 -7947376 + BS2 LINE Jockey 2721 2800 -1921 1 745 4048 2 0 2 chrUextra 21057380 21057848 -7946808 - LSU-rRNA_Dme rRNA rRNA -1646 2254 1788 1 745 1278 0 12 6 chrUextra 21057892 21058052 -7946604 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1628 1 745 5444 16 51 1 chrUextra 21058152 21058824 -7945832 - BATUMI_I LTR Pao -2614 5349 4645 1 745 2114 101 8 63 chrUextra 21058928 21059596 -7945060 - DMSAT6 Satellite Satellite -64 630 1 1 745 5413 30 5 0 chrUextra 21059696 21060367 -7944289 + R1_DM LINE R1 2688 3361 -1995 1 745 1856 166 109 13 chrUextra 21060649 21061140 -7943516 + TART LINE telomeric 8983 9449 -5028 1 745 362 0 19 58 chrUextra 21061240 21061292 -7943364 - NTS_DM Other Other -166 74 25 1 745 1252 18 0 6 chrUextra 21061344 21061509 -7943147 - NTS_DM Other Other -39 201 38 1 745 870 9 0 27 chrUextra 21061509 21061621 -7943035 - NTS_DM Other Other -107 133 25 1 745 1252 18 0 6 chrUextra 21061673 21061838 -7942818 - NTS_DM Other Other -39 201 38 1 745 562 14 0 0 chrUextra 21061838 21061912 -7942744 - NTS_DM Other Other -107 133 60 1 745 5403 21 24 1 chrUextra 21062012 21062684 -7941972 + DOC2_DM LINE Jockey 1838 2524 -2269 1 745 597 0 0 0 chrUextra 21062784 21062854 -7941802 - 5S_DM RNA RNA -65 70 1 1 745 1167 7 0 0 chrUextra 21063078 21063213 -7941443 - 5S_DM RNA RNA 0 135 1 1 745 376 188 0 0 chrUextra 21063567 21063636 -7941020 + HETRP_DM Satellite Satellite 1601 1669 -203 1 745 677 213 0 7 chrUextra 21063803 21063945 -7940711 + HETRP_DM Satellite Satellite 1529 1669 -203 1 745 511 180 0 10 chrUextra 21064122 21064223 -7940433 + HETRP_DM Satellite Satellite 1529 1628 -244 1 745 601 28 0 0 chrUextra 21064328 21064400 -7940256 + R1_DM LINE R1 5285 5356 0 1 745 4182 57 7 5 chrUextra 21064433 21065000 -7939656 + R1_DM LINE R1 1 568 -4788 1 745 322 178 50 101 chrUextra 21065116 21065235 -7939421 + Copia_I LTR Copia 4401 4513 -80 1 745 3244 235 37 19 chrUextra 21065876 21067316 -7937340 + SAR_DM Satellite Satellite 1 1466 -208 1 745 637 66 314 0 chrUextra 21067422 21067543 -7937113 - Gypsy12_I LTR Gypsy -993 4553 4395 1 745 3025 103 4 40 chrUextra 21067561 21068088 -7936568 - Gypsy12_I LTR Gypsy -4944 602 95 1 745 5478 21 5 0 chrUextra 21068188 21068857 -7935799 - R1_DM LINE R1 -856 4500 3829 1 745 4685 5 143 0 chrUextra 21068960 21069632 -7935024 - Gypsy4_I LTR Gypsy -125 6163 5396 1 745 3002 164 11 9 chrUextra 21069747 21070404 -7934252 + SAR_DM Satellite Satellite 326 983 -489 1 745 3553 39 0 0 chrUextra 21070504 21070967 -7933689 + I_DM LINE I 724 1186 -5045 1 745 524 161 390 33 chrUextra 21070963 21071176 -7933480 + ROVER-LTR_DM LTR Gypsy 55 343 -24 1 745 507 256 73 6 chrUextra 21071681 21071846 -7932810 - Gypsy12_I LTR Gypsy -2217 3329 3154 1 745 420 155 0 0 chrUextra 21071877 21071948 -7932708 + DMRT1B LINE R1 3134 3204 -1979 1 745 4997 44 1 5 chrUextra 21072049 21072720 -7931936 + MICROPIA_I LTR Gypsy 1204 1886 -2213 1 745 5699 3 1 3 chrUextra 21072820 21073492 -7931164 + LSU-rRNA_Dme rRNA rRNA 673 1343 -2557 1 745 935 27 26 26 chrUextra 21073592 21073744 -7930912 + NTS_DM Other Other 89 240 0 1 745 1850 4 17 13 chrUextra 21073744 21073983 -7930673 + NTS_DM Other Other 1 240 0 1 745 1817 4 17 17 chrUextra 21073983 21074223 -7930433 + NTS_DM Other Other 1 240 0 1 745 359 0 0 0 chrUextra 21074223 21074264 -7930392 + NTS_DM Other Other 1 41 -199 1 745 5763 3 1 0 chrUextra 21074364 21075036 -7929620 + R1_DM LINE R1 3043 3715 -1641 1 745 1754 177 15 8 chrUextra 21075136 21075528 -7929128 + SAR_DM Satellite Satellite 509 903 -569 1 745 706 32 53 0 chrUextra 21075443 21075538 -7929118 - ARS406_DM Unknown Unknown -164 189 90 1 745 1065 210 0 4 chrUextra 21075543 21075806 -7928850 + SAR_DM Satellite Satellite 496 757 -715 1 745 5766 0 0 1 chrUextra 21075908 21076580 -7928076 - R1_DM LINE R1 -3448 1908 1238 1 745 4220 94 43 16 chrUextra 21076680 21077348 -7927308 + Gypsy12_I LTR Gypsy 1722 2407 -3139 1 745 22 56 0 0 chrUextra 21077458 21077494 -7927162 + AT_rich Low_complexity Low_complexity 1 36 0 1 745 870 9 0 27 chrUextra 21077520 21077632 -7927024 + NTS_DM Other Other 25 133 -107 1 745 1222 18 0 12 chrUextra 21077632 21077798 -7926858 + NTS_DM Other Other 38 201 -39 1 745 870 9 0 27 chrUextra 21077850 21077962 -7926694 + NTS_DM Other Other 25 133 -107 1 745 1186 25 6 6 chrUextra 21077962 21078124 -7926532 + NTS_DM Other Other 38 199 -41 1 745 31 76 0 0 chrUextra 21078225 21078291 -7926365 + AT_rich Low_complexity Low_complexity 1 66 0 1 745 4677 2 0 0 chrUextra 21078364 21078896 -7925760 + SSU-rRNA_Dme rRNA rRNA 1 532 -1463 1 745 5554 14 0 5 chrUextra 21078996 21079668 -7924988 + Gypsy4_I LTR Gypsy 932 1600 -4688 1 745 1077 23 0 0 chrUextra 21079768 21079900 -7924756 + NINJA_I LTR Pao 5344 5475 -536 1 745 4283 28 4 0 chrUextra 21079900 21080440 -7924216 - PROTOP_A DNA P 0 1105 564 1 745 350 167 26 0 chrUextra 21080540 21080618 -7924038 + XDMR Unknown Unknown 282 361 0 1 745 2547 184 12 28 chrUextra 21080562 21081212 -7923444 - SAR_DM Satellite Satellite -352 1120 481 1 745 2898 181 9 6 chrUextra 21081316 21081972 -7922684 - SAR_DM Satellite Satellite -620 852 195 1 745 606 124 0 0 chrUextra 21081879 21081984 -7922672 + ARS406_DM Unknown Unknown 1 105 -248 1 745 2585 179 15 24 chrUextra 21082084 21082743 -7921913 + SAR_DM Satellite Satellite 466 1118 -354 1 745 316 223 0 11 chrUextra 21082658 21082753 -7921903 - XDMR_DM Unknown Unknown 0 360 267 1 745 5696 1 0 0 chrUextra 21082856 21083528 -7921128 - ROO_I LTR Pao -6012 2244 1573 1 745 2678 192 24 8 chrUextra 21083628 21084298 -7920358 - SAR_DM Satellite Satellite -587 885 205 1 745 5698 1 0 0 chrUextra 21084402 21085053 -7919603 - LSU-rRNA_Dme rRNA rRNA -610 3290 2640 1 745 2764 179 9 17 chrUextra 21085189 21085844 -7918812 - SAR_DM Satellite Satellite -389 1083 434 1 745 2236 11 0 0 chrUextra 21085944 21086205 -7918451 - MAX_LTR LTR Pao -60 261 1 1 745 3433 7 0 0 chrUextra 21086205 21086616 -7918040 - MAX_I LTR Pao 0 7914 7504 1 745 34 24 0 0 chrUextra 21086874 21086915 -7917741 + AT_rich Low_complexity Low_complexity 1 41 0 1 745 21 95 0 0 chrUextra 21087127 21087190 -7917466 + AT_rich Low_complexity Low_complexity 1 63 0 1 745 1589 0 5 0 chrUextra 21087202 21087388 -7917268 + LSU-rRNA_Dme rRNA rRNA 1 187 -3713 1 745 5496 17 0 0 chrUextra 21087513 21088160 -7916496 + Invader1_I LTR Gypsy 1 647 -2539 1 745 5616 15 9 0 chrUextra 21088260 21088932 -7915724 - R1_DM LINE R1 -3070 2286 1609 1 745 2990 162 12 15 chrUextra 21089041 21089704 -7914952 + SAR_DM Satellite Satellite 353 1013 -459 1 745 5604 16 0 0 chrUextra 21089804 21090476 -7914180 + R1_DM LINE R1 132 803 -4553 1 745 4222 25 0 2 chrUextra 21091348 21091868 -7912788 + DMCR1A LINE CR1 2324 2842 -1628 1 745 1279 44 0 0 chrUextra 21091862 21092020 -7912636 + DMCR1A LINE CR1 3484 3641 -829 1 745 2861 202 12 18 chrUextra 21092892 21093564 -7911092 + SAR_DM Satellite Satellite 1 668 -216 1 745 5201 32 0 13 chrUextra 21093664 21094336 -7910320 - FW_DM LINE Jockey -2929 1763 1101 1 745 200 259 0 18 chrUextra 21094462 21094517 -7910139 + (CCCCAA)n Simple_repeat Simple_repeat 1 54 0 1 745 2490 117 20 18 chrUextra 21095208 21095852 -7908804 - DMSAT6 Satellite Satellite -34 644 1 1 745 185 108 27 0 chrUextra 21097340 21097377 -7907279 + (TA)n Simple_repeat Simple_repeat 1 38 0 1 745 621 249 6 17 chrUextra 21097531 21097711 -7906945 + TAHRE LINE telomeric 9871 10048 -415 1 745 520 130 62 14 chrUextra 21097737 21097880 -7906776 + TAHRE LINE telomeric 10370 10489 -3988 1 745 1782 53 0 75 chrUextra 21097929 21098196 -7906460 + PROTOP DNA P 1 247 -4233 1 745 4188 75 112 6 chrUextra 21098299 21098953 -7905703 - BATUMI_I LTR Pao -6278 1685 963 1 745 2815 3 3 0 chrUextra 21099415 21099740 -7904916 - SSU-rRNA_Dme rRNA rRNA 0 1995 1670 1 745 2994 170 37 9 chrUextra 21099840 21100512 -7904144 - SAR_DM Satellite Satellite -445 1027 337 1 745 3499 189 0 0 chrUextra 21100612 21101279 -7903377 - ROVER-I_DM LTR Gypsy -3312 3272 2606 1 745 185 0 40 0 chrUextra 21101657 21101682 -7902974 + (TTTTTA)n Simple_repeat Simple_repeat 2 27 0 1 745 230 234 0 0 chrUextra 21101865 21101929 -7902727 + (CATATA)n Simple_repeat Simple_repeat 2 65 0 1 745 23 68 0 0 chrUextra 21102436 21102480 -7902176 + AT_rich Low_complexity Low_complexity 1 44 0 1 745 26 30 0 0 chrUextra 21102526 21102559 -7902097 + AT_rich Low_complexity Low_complexity 1 33 0 1 746 2696 174 32 14 chrUextra 21102937 21103596 -7901060 + SAR_DM Satellite Satellite 192 862 -610 1 746 1867 259 21 37 chrUextra 21103717 21104371 -7900285 + ROVER-I_DM LTR Gypsy 1592 2235 -4349 1 746 643 13 0 0 chrUextra 21105067 21105144 -7899512 + PROTOP DNA P 182 258 -4222 1 746 5358 36 1 5 chrUextra 21105244 21105916 -7898740 + MAX_I LTR Pao 2199 2868 -5046 1 746 262 106 0 21 chrUextra 21106450 21106498 -7898158 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 746 325 81 48 16 chrUextra 21106520 21106583 -7898073 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 746 522 162 0 9 chrUextra 21106582 21106688 -7897968 - DMLTR5 LTR Gypsy 0 266 162 1 746 5516 5 3 0 chrUextra 21106788 21107460 -7897196 + STALKER4_I LTR Gypsy 5596 6269 -261 1 746 21 89 0 0 chrUextra 21107932 21107988 -7896668 + AT_rich Low_complexity Low_complexity 1 56 0 1 746 1986 0 0 0 chrUextra 21108007 21108232 -7896424 - SSU-rRNA_Dme rRNA rRNA 0 1995 1771 1 746 1003 298 72 36 chrUextra 21109113 21109720 -7894936 - Gypsy2_I LTR Gypsy -910 5225 4597 1 746 22 0 0 0 chrUextra 21109734 21109756 -7894900 + AT_rich Low_complexity Low_complexity 1 22 0 1 746 2690 179 38 17 chrUextra 21109874 21110538 -7894118 + SAR_DM Satellite Satellite 260 937 -535 1 746 5711 9 0 1 chrUextra 21110645 21111316 -7893340 - R1_DM LINE R1 -549 4807 4138 1 746 5640 1 1 1 chrUextra 21111416 21112087 -7892569 + ROO_I LTR Pao 6602 7272 -984 1 746 5609 18 0 0 chrUextra 21112187 21112858 -7891798 - R1_DM LINE R1 -838 4518 3848 1 746 2863 164 48 9 chrUextra 21112958 21113629 -7891027 - SAR_DM Satellite Satellite -430 1042 346 1 746 2708 181 46 9 chrUextra 21113729 21114399 -7890257 - SAR_DM Satellite Satellite -549 923 229 1 746 2883 169 24 15 chrUextra 21115272 21115938 -7888718 - SAR_DM Satellite Satellite -577 895 224 1 746 999 188 53 8 chrUextra 21116130 21116634 -7888022 + SAR_DM Satellite Satellite 1 526 -680 1 746 423 132 12 0 chrUextra 21116630 21116713 -7887943 - ARS406_DM Unknown Unknown -235 118 35 1 746 5514 6 1 3 chrUextra 21117584 21118255 -7886401 - R1_DM LINE R1 -4067 1289 620 1 746 3854 16 8 48 chrUextra 21118355 21118874 -7885782 + DM176_LTR LTR Gypsy 10 507 0 1 746 1258 13 7 0 chrUextra 21118874 21119026 -7885630 + DM176_I LTR Gypsy 1 153 -6267 1 746 551 0 130 5 chrUextra 21119130 21119347 -7885309 + (TA)n Simple_repeat Simple_repeat 1 244 0 1 746 3864 2 0 0 chrUextra 21119352 21119797 -7884859 + NOMAD_LTR LTR Gypsy 1 445 -73 1 746 5151 21 0 28 chrUextra 21119897 21120568 -7884088 + CIRCE LINE Composite 4062 4713 -1643 1 746 6032 311 70 61 chrUextra 21120668 21123382 -7881274 + R1_DM LINE R1 2620 5356 0 1 746 1633 72 8 0 chrUextra 21123415 21123652 -7881004 + R1_DM LINE R1 1 239 -5117 1 746 5177 42 0 6 chrUextra 21123752 21124423 -7880233 + STALKER4_I LTR Gypsy 4345 5011 -1519 1 746 813 26 8 73 chrUextra 21124523 21124647 -7880009 + ROVER-LTR_DM LTR Gypsy 252 367 0 1 746 2939 0 2 149 chrUextra 21124647 21125136 -7879520 + ROVER-I_DM LTR Gypsy 1 417 -6167 1 746 445 17 0 0 chrUextra 21125136 21125194 -7879462 + ROVER-I_DM LTR Gypsy 718 775 -5809 1 746 1971 190 64 12 chrUextra 21125294 21125765 -7878891 - SAR_DM Satellite Satellite -667 706 22 1 746 1235 86 0 0 chrUextra 21125765 21125952 -7878704 + ARS406_DM Unknown Unknown 1 187 -166 1 746 1971 190 64 12 chrUextra 21125952 21125965 -7878691 - SAR_DM Satellite Satellite -667 21 1 1 746 2794 171 15 11 chrUextra 21126077 21126735 -7877921 + SAR_DM Satellite Satellite 326 986 -486 1 746 5723 13 0 0 chrUextra 21126836 21127507 -7877149 - BATUMI_I LTR Pao -2248 5715 5045 1 746 5822 0 3 1 chrUextra 21127607 21128278 -7876378 + LSU-rRNA_Dme rRNA rRNA 3163 3834 -66 1 746 579 53 0 0 chrUextra 21129149 21129224 -7875432 - DMCR1A LINE CR1 -2483 1987 1913 1 746 495 355 54 7 chrUextra 21129314 21129743 -7874913 + Gypsy12_I LTR Gypsy 2959 3407 -2139 1 746 2144 155 12 3 chrUextra 21129921 21130585 -7874071 - SAR_DM Satellite Satellite -645 670 1 1 746 4482 3 0 0 chrUextra 21130691 21131265 -7873391 + QUASIMODO_I LTR Gypsy 5487 6060 0 1 746 787 0 0 0 chrUextra 21131265 21131362 -7873294 + QUASIMODO_LTR LTR Gypsy 1 97 -561 1 746 4000 95 3 0 chrUextra 21131523 21132131 -7872525 - S_DM DNA Tc1 0 1736 1127 1 746 4480 4 0 0 chrUextra 21132233 21132757 -7871899 + G2_DM LINE Jockey 2579 3102 0 1 746 1083 42 28 0 chrUextra 21132760 21132904 -7871752 - R2_DM LINE R2 -1591 2016 1869 1 746 1492 11 0 0 chrUextra 21133004 21133180 -7871476 - HOBO DNA hAT -2840 176 1 1 746 626 0 0 0 chrUextra 21133775 21133846 -7870810 + LSU-rRNA_Dme rRNA rRNA 2562 2632 -1268 1 746 5043 15 2 0 chrUextra 21133846 21134446 -7870210 + R1_DM LINE R1 1 601 -4755 1 746 602 125 0 0 chrUextra 21134546 21134650 -7870006 - ARS406_DM Unknown Unknown -249 104 1 1 746 2863 177 11 8 chrUextra 21134557 21135213 -7869443 + SAR_DM Satellite Satellite 195 852 -620 1 746 5655 18 1 1 chrUextra 21135317 21135988 -7868668 + DIVER_I LTR Pao 4657 5327 -316 1 746 5685 1 1 5 chrUextra 21136088 21136759 -7867897 - LSU-rRNA_Dme rRNA rRNA -2549 1351 683 1 746 2022 0 0 0 chrUextra 21136859 21137090 -7867566 + R1_DM LINE R1 5126 5356 0 1 746 3829 2 0 0 chrUextra 21137088 21137530 -7867126 + LSU-rRNA_Dme rRNA rRNA 2640 3081 -819 1 746 4246 6 2 4 chrUextra 21137630 21138142 -7866514 - ACCORD_I LTR Gypsy -5777 511 1 1 746 1333 13 0 0 chrUextra 21138142 21138301 -7866355 - ACCORD_LTR LTR Gypsy 0 558 400 1 746 2266 159 25 9 chrUextra 21138401 21138452 -7866204 + SAR_DM Satellite Satellite 1 67 -1114 1 746 1009 88 0 6 chrUextra 21138452 21138612 -7866044 - ARS406_DM Unknown Unknown -164 189 31 1 746 2266 159 25 9 chrUextra 21138612 21139072 -7865584 + SAR_DM Satellite Satellite 68 681 -500 1 746 790 11 0 0 chrUextra 21139172 21139266 -7865390 + QUASIMODO_I LTR Gypsy 5967 6060 0 1 746 4966 2 0 0 chrUextra 21139266 21139843 -7864813 + QUASIMODO_LTR LTR Gypsy 1 577 -81 1 746 22 35 0 0 chrUextra 21140294 21140323 -7864333 + AT_rich Low_complexity Low_complexity 1 29 0 1 746 241 35 0 0 chrUextra 21140731 21140760 -7863896 + Baggins1 LINE LOA 4728 4756 -697 1 746 693 103 241 0 chrUextra 21140768 21140913 -7863743 + FB4_DM DNA Tc1 3908 4087 -2 1 746 5716 13 0 0 chrUextra 21142256 21142927 -7861729 - Gypsy4_I LTR Gypsy -2936 3352 2682 1 746 5392 27 25 0 chrUextra 21143027 21143698 -7860958 - R1_DM LINE R1 -3320 2036 1349 1 746 244 128 0 21 chrUextra 21144041 21144089 -7860567 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 746 327 66 65 16 chrUextra 21144404 21144466 -7860190 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 746 262 106 0 21 chrUextra 21144855 21144903 -7859753 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 746 351 49 65 16 chrUextra 21144925 21144987 -7859669 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 746 697 193 0 7 chrUextra 21144986 21145132 -7859524 - DMLTR5 LTR Gypsy 0 266 122 1 746 2866 181 11 16 chrUextra 21145340 21146011 -7858645 - SAR_DM Satellite Satellite -1090 667 1 1 746 5667 1 0 0 chrUextra 21146111 21146782 -7857874 - LSU-rRNA_Dme rRNA rRNA -2876 1024 354 1 746 2909 20 14 0 chrUextra 21146882 21147230 -7857426 + BS2 LINE Jockey 3264 3616 -1105 1 746 1292 212 17 10 chrUextra 21147262 21147553 -7857103 + Gypsy_I LTR Gypsy 452 744 -5763 1 746 2715 191 16 20 chrUextra 21147658 21148323 -7856333 + SAR_DM Satellite Satellite 1 661 -208 1 746 4023 16 0 14 chrUextra 21148424 21148943 -7855713 - STALKER4_I LTR Gypsy -4955 1575 1064 1 746 2944 17 0 30 chrUextra 21149195 21149563 -7855093 + CIRCE LINE Composite 1526 1882 -4474 1 746 463 303 45 42 chrUextra 21149572 21149858 -7854798 + Gypsy12_I LTR Gypsy 3835 4121 -1425 1 746 1776 18 4 26 chrUextra 21149639 21149866 -7854790 + CIRCE LINE Composite 1888 2109 -4247 1 746 5867 1 0 1 chrUextra 21149966 21150637 -7854019 + SSU-rRNA_Dme rRNA rRNA 4 673 -1322 1 746 2833 171 12 12 chrUextra 21150742 21151406 -7853250 + SAR_DM Satellite Satellite 295 958 -514 1 746 3019 171 9 8 chrUextra 21151508 21152175 -7852481 + SAR_DM Satellite Satellite 212 879 -593 1 746 495 0 17 0 chrUextra 21152279 21152339 -7852317 - FW_DM LINE Jockey -2373 2319 2259 1 746 5212 14 18 0 chrUextra 21152327 21152950 -7851706 - Gypsy4_I LTR Gypsy -2600 3688 3055 1 746 2455 3 7 0 chrUextra 21153050 21153339 -7851317 - R1_DM LINE R1 -5065 291 1 1 746 3324 3 0 0 chrUextra 21153339 21153721 -7850935 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2251 1 746 2304 48 0 0 chrUextra 21153821 21154114 -7850542 - R1_DM LINE R1 -3736 1620 1328 1 746 2669 32 3 11 chrUextra 21154111 21154462 -7850194 - R1_DM LINE R1 -4179 1177 830 1 746 324 44 0 0 chrUextra 21154447 21154492 -7850164 - R1_DM LINE R1 -4744 612 568 1 746 4188 4 0 2 chrUextra 21154592 21155092 -7849564 + DOC LINE Jockey 4224 4722 -3 1 746 401 184 0 127 chrUextra 21155143 21155261 -7849395 + ROVER-I_DM LTR Gypsy 1689 1791 -4793 1 746 2181 204 44 11 chrUextra 21155364 21156034 -7848622 + SAR_DM Satellite Satellite 1 692 -205 1 746 4780 44 46 15 chrUextra 21156134 21156805 -7847851 + DMCR1A LINE CR1 2229 2920 -1550 1 746 831 0 10 0 chrUextra 21156905 21157004 -7847652 - LSU-rRNA_Dme rRNA rRNA -3800 100 1 1 746 21 95 0 0 chrUextra 21157016 21157079 -7847577 + AT_rich Low_complexity Low_complexity 1 63 0 1 746 34 24 0 0 chrUextra 21157293 21157334 -7847322 + AT_rich Low_complexity Low_complexity 1 41 0 1 746 243 302 68 68 chrUextra 21157683 21158077 -7846579 + BLASTOPIA_I LTR Gypsy 2203 2596 -1885 1 746 334 307 7 7 chrUextra 21158090 21158231 -7846425 + Invader3_I LTR Gypsy 2889 3029 -1859 1 746 5346 30 27 0 chrUextra 21159220 21159889 -7844767 - R1_DM LINE R1 -1853 3503 2817 1 746 1354 27 97 16 chrUextra 21159989 21160175 -7844481 - PROTOP_B DNA P -952 201 1 1 746 3177 0 0 3 chrUextra 21160766 21161131 -7843525 - LSU-rRNA_Dme rRNA rRNA -1749 2151 1788 1 746 2086 0 8 4 chrUextra 21161175 21161431 -7843225 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1532 1 746 5567 22 1 0 chrUextra 21161531 21162202 -7842454 + DMCR1A LINE CR1 2333 3004 -1466 1 746 710 308 45 40 chrUextra 21162335 21162970 -7841686 + BLOOD_I LTR Gypsy 2021 2664 -3932 1 746 255 125 0 0 chrUextra 21163086 21163126 -7841530 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 746 22 56 0 0 chrUextra 21163139 21163175 -7841481 + AT_rich Low_complexity Low_complexity 1 36 0 1 746 857 18 0 27 chrUextra 21163201 21163313 -7841343 + NTS_DM Other Other 25 133 -107 1 746 1252 18 0 6 chrUextra 21163313 21163478 -7841178 + NTS_DM Other Other 38 201 -39 1 746 870 9 0 27 chrUextra 21163530 21163642 -7841014 + NTS_DM Other Other 25 133 -107 1 746 813 20 0 0 chrUextra 21163642 21163744 -7840912 + NTS_DM Other Other 38 139 -101 1 746 1316 6 22 16 chrUextra 21163844 21164027 -7840629 + NTS_DM Other Other 57 240 0 1 746 1847 4 17 13 chrUextra 21164027 21164266 -7840390 + NTS_DM Other Other 1 240 0 1 746 1301 6 0 18 chrUextra 21164266 21164431 -7840225 + NTS_DM Other Other 1 162 -78 1 746 5688 13 0 0 chrUextra 21164615 21165286 -7839370 + DMRT1B LINE R1 1773 2443 -2740 1 746 1725 4 17 17 chrUextra 21165386 21165616 -7839040 + NTS_DM Other Other 11 240 0 1 746 1265 6 0 30 chrUextra 21165616 21165783 -7838873 + NTS_DM Other Other 1 162 -78 1 746 488 119 36 0 chrUextra 21165894 21165978 -7838678 + NTS_DM Other Other 4 90 -150 1 746 229 291 23 16 chrUextra 21166237 21166366 -7838290 - HMSBEAGLE_I LTR Gypsy -6176 353 224 1 746 3571 5 0 0 chrUextra 21167699 21168115 -7836541 - LSU-rRNA_Dme rRNA rRNA -845 3055 2640 1 746 2204 4 0 4 chrUextra 21168113 21168370 -7836286 - R1_DM LINE R1 0 5356 5101 1 746 459 100 0 0 chrUextra 21168470 21168540 -7836116 - DM297_I LTR Gypsy -5308 859 790 1 746 1215 90 53 0 chrUextra 21168538 21168727 -7835929 + DM297_I LTR Gypsy 590 788 -5379 1 746 488 61 60 12 chrUextra 21168715 21168798 -7835858 - DM297_I LTR Gypsy -6080 87 1 1 746 589 109 286 5 chrUextra 21168798 21168976 -7835680 - DM297_LTR LTR Gypsy 0 414 187 1 746 585 13 13 0 chrUextra 21169241 21169319 -7835337 + NTS_DM Other Other 55 133 -107 1 746 1252 18 0 6 chrUextra 21169319 21169484 -7835172 + NTS_DM Other Other 38 201 -39 1 746 870 9 0 27 chrUextra 21169536 21169648 -7835008 + NTS_DM Other Other 25 133 -107 1 746 1438 15 20 20 chrUextra 21169648 21169851 -7834805 + NTS_DM Other Other 38 240 0 1 746 521 16 0 0 chrUextra 21169851 21169912 -7834744 + NTS_DM Other Other 1 61 -179 1 746 337 319 28 38 chrUextra 21170351 21170666 -7833990 - Gypsy3_I LTR Gypsy -5228 1784 1218 1 746 5789 0 0 0 chrUextra 21170783 21171454 -7833202 - G2_DM LINE Jockey -1835 1267 597 1 746 5678 0 0 1 chrUextra 21171554 21172225 -7832431 + LSU-rRNA_Dme rRNA rRNA 446 1115 -2785 1 746 2683 188 18 26 chrUextra 21172325 21172996 -7831660 + SAR_DM Satellite Satellite 1 665 -214 1 746 614 200 7 14 chrUextra 21173111 21173253 -7831403 + HETRP_DM Satellite Satellite 1529 1669 -203 1 746 655 186 7 14 chrUextra 21173388 21173530 -7831126 + HETRP_DM Satellite Satellite 1529 1669 -203 1 746 464 188 0 10 chrUextra 21173670 21173767 -7830889 + HETRP_DM Satellite Satellite 1529 1624 -248 1 746 5601 3 0 1 chrUextra 21173867 21174538 -7830118 + DM176_I LTR Gypsy 4675 5344 -1076 1 746 391 147 0 13 chrUextra 21174643 21174719 -7829937 - Gypsy_I LTR Gypsy -6232 275 201 1 746 231 36 0 0 chrUextra 21174723 21174751 -7829905 + (T)n Simple_repeat Simple_repeat 1 28 0 1 746 3932 66 7 0 chrUextra 21174763 21175309 -7829347 - BS2 LINE Jockey 0 4721 4172 1 746 676 255 21 54 chrUextra 21175418 21175659 -7828997 + Invader1_I LTR Gypsy 2356 2751 -583 1 746 2282 31 90 2 chrUextra 21176180 21176724 -7827932 + IDEFIX_I LTR Gypsy 5037 5628 0 1 746 963 16 0 8 chrUextra 21176724 21176851 -7827805 + IDEFIX_LTR LTR Gypsy 1 126 -468 1 746 5722 0 1 6 chrUextra 21176951 21177622 -7827034 + SSU-rRNA_Dme rRNA rRNA 998 1665 -330 1 746 1451 18 0 0 chrUextra 21177723 21177894 -7826762 + R1_DM LINE R1 5186 5356 0 1 746 3215 84 9 4 chrUextra 21177927 21178393 -7826263 + R1_DM LINE R1 1 468 -4888 1 746 2873 178 9 9 chrUextra 21178496 21179164 -7825492 - SAR_DM Satellite Satellite -593 879 212 1 746 2345 208 9 21 chrUextra 21179264 21179926 -7824730 + SAR_DM Satellite Satellite 467 1120 -352 1 746 318 169 0 0 chrUextra 21179870 21179935 -7824721 - XDMR Unknown Unknown 0 361 297 1 746 870 9 0 27 chrUextra 21180063 21180175 -7824481 + NTS_DM Other Other 25 133 -107 1 746 1252 18 0 6 chrUextra 21180175 21180340 -7824316 + NTS_DM Other Other 38 201 -39 1 746 870 9 0 27 chrUextra 21180392 21180504 -7824152 + NTS_DM Other Other 25 133 -107 1 746 1256 18 0 6 chrUextra 21180504 21180669 -7823987 + NTS_DM Other Other 38 201 -39 1 746 2852 65 50 2 chrUextra 21181060 21181477 -7823179 - PROTOP_A DNA P 0 1105 669 1 746 5342 0 2 2 chrUextra 21181577 21182190 -7822466 + LSU-rRNA_Dme rRNA rRNA 3288 3900 0 1 746 5818 0 3 1 chrUextra 21182348 21183019 -7821637 - LSU-rRNA_Dme rRNA rRNA -168 3732 3061 1 746 58 15 0 0 chrUextra 21183165 21183230 -7821426 + AT_rich Low_complexity Low_complexity 1 65 0 1 746 62 26 0 0 chrUextra 21183714 21183790 -7820866 + AT_rich Low_complexity Low_complexity 1 76 0 1 746 5574 18 1 0 chrUextra 21183890 21184561 -7820095 + FW_DM LINE Jockey 395 1066 -3626 1 746 2714 168 21 13 chrUextra 21184662 21185290 -7819366 - SAR_DM Satellite Satellite -645 827 195 1 746 852 89 0 7 chrUextra 21185196 21185332 -7819324 + ARS406_DM Unknown Unknown 1 135 -218 1 746 1025 50 0 0 chrUextra 21185432 21185571 -7819085 + ARS406_DM Unknown Unknown 51 189 -164 1 746 2873 176 9 9 chrUextra 21185448 21186103 -7818553 - SAR_DM Satellite Satellite -535 937 283 1 746 4737 92 1 1 chrUextra 21186203 21186874 -7817782 + Gypsy12_I LTR Gypsy 3982 4652 -894 1 746 3065 167 8 14 chrUextra 21186974 21187641 -7817015 + SAR_DM Satellite Satellite 385 1047 -425 1 746 5615 12 0 0 chrUextra 21187745 21188416 -7816240 - ROO_I LTR Pao -3619 4637 3967 1 746 3854 0 5 0 chrUextra 21188516 21188963 -7815693 - R1_DM LINE R1 -4907 449 1 1 746 229 88 0 0 chrUextra 21188963 21188997 -7815659 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2599 1 746 1720 5 0 0 chrUextra 21188991 21189187 -7815469 - LSU-rRNA_Dme rRNA rRNA -1246 2654 2459 1 746 5774 5 0 0 chrUextra 21189287 21189958 -7814698 - R1_DM LINE R1 -221 5135 4465 1 746 782 0 0 0 chrUextra 21190058 21190147 -7814509 - NTS_DM Other Other -151 89 1 1 746 1850 4 17 13 chrUextra 21190147 21190386 -7814270 - NTS_DM Other Other 0 240 1 1 746 1698 21 21 17 chrUextra 21190386 21190625 -7814031 - NTS_DM Other Other 0 240 1 1 746 619 20 39 39 chrUextra 21190625 21190729 -7813927 - NTS_DM Other Other 0 240 137 1 746 3065 171 9 8 chrUextra 21190830 21191500 -7813156 - SAR_DM Satellite Satellite -535 937 267 1 746 1762 155 93 45 chrUextra 21191603 21192271 -7812385 + Stalker2_I LTR Gypsy 337 1110 -5420 1 746 849 132 0 0 chrUextra 21192551 21192718 -7811938 + (ACATG)n Simple_repeat Simple_repeat 3 169 0 1 746 5704 0 1 0 chrUextra 21193142 21193813 -7810843 - ROO_I LTR Pao -2730 5526 4855 1 746 1318 6 0 0 chrUextra 21193913 21194069 -7810587 - MICROPIA_LTR LTR Gypsy -320 156 1 1 746 4263 12 0 2 chrUextra 21194069 21194584 -7810072 - MICROPIA_I LTR Gypsy 0 4476 3963 1 746 2702 156 33 45 chrUextra 21194684 21195355 -7809301 + SAR_DM Satellite Satellite 200 862 -610 1 746 5506 10 0 1 chrUextra 21195455 21196126 -7808530 + STALKER4_I LTR Gypsy 5031 5700 -830 1 746 571 148 40 16 chrUextra 21196239 21196363 -7808293 - DMTOM1_LTR LTR Gypsy 0 410 284 1 746 254 190 17 0 chrUextra 21196380 21196438 -7808218 - DM176_LTR LTR Gypsy -141 366 308 1 746 248 133 22 0 chrUextra 21196557 21196602 -7808054 - DM176_LTR LTR Gypsy -238 269 224 1 746 2972 176 6 6 chrUextra 21196997 21197659 -7806997 - SAR_DM Satellite Satellite -594 878 217 1 746 1547 30 76 0 chrUextra 21197769 21197966 -7806690 - PROTOP_B DNA P -941 212 1 1 746 2781 182 9 19 chrUextra 21198539 21199210 -7805446 + SAR_DM Satellite Satellite 440 1103 -369 1 746 37 23 0 0 chrUextra 21199672 21199716 -7804940 + AT_rich Low_complexity Low_complexity 1 44 0 1 746 843 88 7 7 chrUextra 21199844 21199981 -7804675 - DNAREP1_DM LINE Penelope -450 144 8 1 746 4558 19 86 1 chrUextra 21200081 21200752 -7803904 - R1_DM LINE R1 -1202 4154 3427 1 746 1485 66 10 0 chrUextra 21200852 21201049 -7803607 + STALKER4_LTR LTR Gypsy 181 379 -23 1 746 31 58 0 0 chrUextra 21201187 21201239 -7803417 + AT_rich Low_complexity Low_complexity 1 52 0 1 746 1275 205 0 0 chrUextra 21201240 21201523 -7803133 + STALKER4_I LTR Gypsy 235 517 -6013 1 746 5419 13 0 0 chrUextra 21201623 21202294 -7802362 + Invader2_I LTR Gypsy 3737 4407 -185 1 746 1778 5 0 0 chrUextra 21202394 21202603 -7802053 + QUASIMODO_LTR LTR Gypsy 450 658 0 1 746 3759 9 0 19 chrUextra 21202603 21203065 -7801591 + QUASIMODO_I LTR Gypsy 1 453 -5607 1 746 5107 54 1 5 chrUextra 21203165 21203836 -7800820 + BATUMI_I LTR Pao 3522 4190 -3773 1 746 2356 99 26 15 chrUextra 21203940 21204600 -7800056 - DMSAT6 Satellite Satellite -25 666 1 1 746 3032 108 81 99 chrUextra 21204708 21205376 -7799280 - TART LINE telomeric -6837 7640 6985 1 746 2832 182 14 11 chrUextra 21205481 21206135 -7798521 + SAR_DM Satellite Satellite 282 937 -535 1 746 778 118 7 0 chrUextra 21206013 21206149 -7798507 - ARS406_DM Unknown Unknown -164 189 53 1 746 5201 29 3 8 chrUextra 21206249 21206909 -7797747 - BATUMI_I LTR Pao -5912 2051 1395 1 746 4905 22 6 49 chrUextra 21207020 21207690 -7796966 + BATUMI_I LTR Pao 2092 2732 -5231 1 746 1601 266 19 19 chrUextra 21207793 21208379 -7796277 + FROGGER_I LTR Copia 1406 1991 -86 1 746 2337 157 21 21 chrUextra 21208562 21209233 -7795423 + DMSAT6 Satellite Satellite 1 671 -97 1 746 4746 16 113 1 chrUextra 21209333 21210004 -7794652 - DOC LINE Jockey -2058 2667 1922 1 746 582 0 0 0 chrUextra 21210104 21210175 -7794481 + R2_DM LINE R2 3537 3607 0 1 746 5186 5 2 2 chrUextra 21210171 21210775 -7793881 + LSU-rRNA_Dme rRNA rRNA 2578 3181 -719 1 746 711 0 0 0 chrUextra 21210875 21210954 -7793702 + (TTCTC)n Simple_repeat Simple_repeat 2 80 0 1 746 2206 100 8 57 chrUextra 21211646 21212317 -7792339 - DMSAT6 Satellite Satellite -50 637 1 1 746 2722 188 15 8 chrUextra 21212417 21213071 -7791585 + SAR_DM Satellite Satellite 418 1076 -396 1 746 3086 156 92 6 chrUextra 21213188 21213859 -7790797 + IDEFIX_I LTR Gypsy 2986 3714 -1914 1 746 2528 156 11 11 chrUextra 21213962 21214628 -7790028 - SAR_DM Satellite Satellite -635 666 1 1 746 5682 1 1 0 chrUextra 21214730 21215401 -7789255 + DOC LINE Jockey 1532 2203 -2522 1 746 488 119 36 0 chrUextra 21215510 21215594 -7789062 + NTS_DM Other Other 4 90 -150 1 746 28 48 0 0 chrUextra 21215867 21215909 -7788747 + AT_rich Low_complexity Low_complexity 1 42 0 1 746 212 0 36 0 chrUextra 21216144 21216172 -7788484 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 746 5620 9 0 0 chrUextra 21216272 21216943 -7787713 + STALKER4_I LTR Gypsy 2126 2796 -3734 1 746 588 14 0 0 chrUextra 21217043 21217114 -7787542 + ARS406_DM Unknown Unknown 119 189 -164 1 746 2147 202 70 26 chrUextra 21217051 21217713 -7786943 - SAR_DM Satellite Satellite -242 1230 540 1 746 756 0 0 0 chrUextra 21217814 21217903 -7786753 - R1_DM LINE R1 -347 5009 4921 1 746 3766 0 0 0 chrUextra 21217903 21218331 -7786325 - ROO_LTR LTR Pao 0 428 1 1 746 1262 0 7 0 chrUextra 21218331 21218485 -7786171 - ROO_I LTR Pao 0 8256 8102 1 746 5187 19 0 8 chrUextra 21218585 21219256 -7785400 + IDEFIX_I LTR Gypsy 2906 3571 -2057 1 746 3152 27 10 7 chrUextra 21219360 21219773 -7784883 - BATUMI_I LTR Pao -1123 6840 6427 1 746 1737 30 0 4 chrUextra 21219796 21220027 -7784629 + BATUMI_I LTR Pao 7303 7532 -431 1 746 805 52 0 17 chrUextra 21221452 21221569 -7783087 + (GAGAA)n Simple_repeat Simple_repeat 4 118 0 1 746 1815 4 17 13 chrUextra 21221669 21221905 -7782751 + NTS_DM Other Other 4 240 0 1 746 1301 6 0 18 chrUextra 21221905 21222070 -7782586 + NTS_DM Other Other 1 162 -78 1 746 488 119 36 0 chrUextra 21222180 21222264 -7782392 + NTS_DM Other Other 4 90 -150 1 746 5519 9 6 0 chrUextra 21222440 21223111 -7781545 - STALKER4_I LTR Gypsy -3634 2896 2222 1 746 1579 196 45 3 chrUextra 21223211 21223861 -7780795 - SAR_DM Satellite Satellite -723 677 1 1 746 697 193 0 7 chrUextra 21224198 21224344 -7780312 + DMLTR5 LTR Gypsy 122 266 0 1 746 351 49 65 16 chrUextra 21224343 21224405 -7780251 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 1 746 262 106 0 21 chrUextra 21224427 21224475 -7780181 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 746 4465 109 15 1 chrUextra 21224753 21225424 -7779232 - Gypsy_I LTR Gypsy -267 6240 5561 1 746 5733 5 0 0 chrUextra 21225524 21226195 -7778461 - R1_DM LINE R1 -1878 3478 2808 1 746 2624 179 12 23 chrUextra 21226295 21226957 -7777699 + SAR_DM Satellite Satellite 465 1119 -353 1 746 270 188 16 0 chrUextra 21226902 21226966 -7777690 - XDMR Unknown Unknown 0 361 297 1 746 682 305 47 45 chrUextra 21227066 21227732 -7776924 + SAR_DM Satellite Satellite 242 908 -564 1 746 34 24 0 0 chrUextra 21227985 21228026 -7776630 + AT_rich Low_complexity Low_complexity 1 41 0 1 746 2902 165 17 9 chrUextra 21228630 21229277 -7775379 - SAR_DM Satellite Satellite -396 1076 425 1 746 31 58 0 0 chrUextra 21229522 21229574 -7775082 + AT_rich Low_complexity Low_complexity 1 52 0 1 746 1371 159 116 8 chrUextra 21229575 21230050 -7774606 + STALKER4_I LTR Gypsy 235 871 -5659 1 746 4426 54 118 5 chrUextra 21230150 21230821 -7773835 - TRANSIB2 DNA Transib -1506 1338 592 1 746 2874 176 11 11 chrUextra 21230921 21231587 -7773069 + SAR_DM Satellite Satellite 293 958 -514 1 746 5440 19 0 0 chrUextra 21231692 21232363 -7772293 - STALKER4_I LTR Gypsy -3411 3119 2449 1 746 5656 0 5 0 chrUextra 21232463 21233134 -7771522 - ROO_I LTR Pao -4952 3304 2631 1 93 2863 171 27 14 chrUextra 21233243 21233905 -7770751 - SAR_DM Satellite Satellite -418 1054 384 1 747 1722 269 27 27 chrUextra 21234007 21234676 -7769980 + ROVER-I_DM LTR Gypsy 1245 1913 -4671 1 747 5417 33 0 3 chrUextra 21234776 21235447 -7769209 + R1_DM LINE R1 1318 1986 -3370 1 747 5840 3 0 0 chrUextra 21235547 21236218 -7768438 - DIVER_I LTR Pao -3732 1911 1241 1 747 5276 24 0 15 chrUextra 21236318 21236989 -7767667 + FW_DM LINE Jockey 1396 2056 -2636 1 747 4543 17 0 2 chrUextra 21237089 21237630 -7767026 + R2_DM LINE R2 3065 3604 -3 1 747 433 55 0 0 chrUextra 21237626 21237681 -7766975 + LSU-rRNA_Dme rRNA rRNA 2578 2632 -1268 1 747 509 59 0 0 chrUextra 21237681 21237749 -7766907 + R1_DM LINE R1 1 68 -5288 1 747 2483 41 3 0 chrUextra 21237862 21238178 -7766478 + PROTOP DNA P 4164 4480 0 1 747 520 158 43 17 chrUextra 21238633 21238749 -7765907 + SAR_DM Satellite Satellite 785 903 -569 1 747 644 63 53 0 chrUextra 21238664 21238759 -7765897 - ARS406_DM Unknown Unknown -164 189 90 1 747 2381 182 7 7 chrUextra 21238764 21239302 -7765354 + SAR_DM Satellite Satellite 496 1033 -439 1 747 690 19 0 19 chrUextra 21239402 21239507 -7765149 + DOC LINE Jockey 4617 4719 -6 1 747 499 175 83 0 chrUextra 21239505 21239625 -7765031 + DMCR1A LINE CR1 2276 2405 -2065 1 747 696 243 107 11 chrUextra 21239684 21239955 -7764701 - BS LINE Jockey -1688 3438 3142 1 747 5698 1 1 0 chrUextra 21240173 21240844 -7763812 - LSU-rRNA_Dme rRNA rRNA -2768 1132 461 1 747 4779 89 0 0 chrUextra 21240944 21241615 -7763041 - R1_DM LINE R1 -3448 1908 1238 1 747 5616 0 1 1 chrUextra 21241715 21242386 -7762270 - LSU-rRNA_Dme rRNA rRNA -2877 1023 353 1 747 5806 0 0 0 chrUextra 21242486 21243157 -7761499 + TIRANT_I LTR Gypsy 2991 3661 -4031 1 747 3187 166 6 6 chrUextra 21243268 21243928 -7760728 + SAR_DM Satellite Satellite 369 1028 -444 1 747 3159 160 10 9 chrUextra 21244028 21244698 -7759958 + SAR_DM Satellite Satellite 377 1047 -425 1 747 815 0 0 0 chrUextra 21244798 21244893 -7759763 - DOC LINE Jockey -4599 126 32 1 747 23 33 0 0 chrUextra 21244938 21244968 -7759688 + AT_rich Low_complexity Low_complexity 1 30 0 1 747 5695 10 3 0 chrUextra 21245568 21246238 -7758418 - DOC2_DM LINE Jockey -2398 2395 1724 1 747 5602 15 0 6 chrUextra 21246338 21247008 -7757648 - FW_DM LINE Jockey -559 4133 3468 1 747 4811 5 4 0 chrUextra 21247108 21247671 -7756985 - R1_DM LINE R1 -4791 565 1 1 747 679 0 0 0 chrUextra 21247701 21247778 -7756878 - LSU-rRNA_Dme rRNA rRNA -1246 2654 2578 1 747 2861 186 6 3 chrUextra 21247879 21248517 -7756139 - SAR_DM Satellite Satellite -587 885 246 1 747 399 100 14 0 chrUextra 21248477 21248547 -7756109 + ARS406_DM Unknown Unknown 1 71 -282 1 747 5008 40 1 21 chrUextra 21248660 21249318 -7755338 - Baggins1 LINE LOA 0 5453 4809 1 747 1149 28 22 22 chrUextra 21249418 21249599 -7755057 + NTS_DM Other Other 60 240 0 1 747 1559 25 0 0 chrUextra 21249599 21249797 -7754859 + NTS_DM Other Other 1 198 -42 1 747 2355 0 0 0 chrUextra 21249806 21250088 -7754568 - G2_DM LINE Jockey 0 3102 2821 1 747 2838 171 11 9 chrUextra 21250191 21250833 -7753823 - SAR_DM Satellite Satellite -635 837 195 1 747 650 127 0 8 chrUextra 21250739 21250858 -7753798 + ARS406_DM Unknown Unknown 1 118 -235 1 747 496 165 0 0 chrUextra 21250958 21251061 -7753595 - ARS406_DM Unknown Unknown -250 103 1 1 747 2798 193 5 6 chrUextra 21250970 21251627 -7753029 + SAR_DM Satellite Satellite 197 852 -620 1 747 2733 171 39 9 chrUextra 21251728 21252395 -7752261 - SAR_DM Satellite Satellite -444 1028 342 1 747 2657 197 5 6 chrUextra 21252506 21253143 -7751513 - SAR_DM Satellite Satellite -642 830 195 1 747 662 136 0 0 chrUextra 21253050 21253168 -7751488 + ARS406_DM Unknown Unknown 1 118 -235 1 747 979 201 8 8 chrUextra 21253274 21253353 -7751303 - SAR_DM Satellite Satellite -749 723 473 1 747 1086 99 0 0 chrUextra 21253353 21253525 -7751131 + ARS406_DM Unknown Unknown 1 172 -181 1 747 1861 159 20 10 chrUextra 21253543 21253938 -7750718 - SAR_DM Satellite Satellite -690 782 384 1 747 378 0 0 0 chrUextra 21254038 21254080 -7750576 + (TTCTC)n Simple_repeat Simple_repeat 4 45 0 1 747 5462 22 25 1 chrUextra 21254808 21255478 -7749178 - Copia2_I LTR Copia -136 4026 3341 1 747 5536 6 18 0 chrUextra 21255578 21256248 -7748408 + STALKER4_I LTR Gypsy 4654 5335 -1195 1 747 5268 31 6 0 chrUextra 21256348 21257018 -7747638 - MDG1_I LTR Gypsy -3707 2889 2216 1 747 3037 175 6 6 chrUextra 21257124 21257781 -7746875 - SAR_DM Satellite Satellite -569 903 247 1 747 5232 21 69 1 chrUextra 21257888 21258558 -7746098 - R1_DM LINE R1 -1264 4092 3378 1 747 1755 0 0 0 chrUextra 21259430 21259643 -7745013 + DOC LINE Jockey 698 910 -3815 1 747 3765 9 0 4 chrUextra 21259644 21260098 -7744558 + DOC LINE Jockey 1152 1603 -3122 1 747 21 95 0 0 chrUextra 21260205 21260268 -7744388 + AT_rich Low_complexity Low_complexity 1 63 0 1 747 4662 0 0 42 chrUextra 21260280 21260868 -7743788 + LSU-rRNA_Dme rRNA rRNA 1 563 -3337 1 747 2898 63 5 17 chrUextra 21261172 21261578 -7743078 - Baggins1 LINE LOA -262 5191 4791 1 747 2885 177 9 9 chrUextra 21261749 21262406 -7742250 - SAR_DM Satellite Satellite -411 1061 405 1 747 2441 102 23 5 chrUextra 21262521 21263178 -7741478 - DMSAT6 Satellite Satellite 0 669 1 1 747 5758 3 0 1 chrUextra 21263278 21263948 -7740708 - R1_DM LINE R1 -1555 3801 3133 1 747 1788 38 17 100 chrUextra 21264427 21264718 -7739938 + Baggins1 LINE LOA 143 409 -5044 1 747 5797 0 0 3 chrUextra 21264818 21265488 -7739168 + SSU-rRNA_Dme rRNA rRNA 497 1164 -831 1 747 5588 16 0 0 chrUextra 21265588 21266258 -7738398 - STALKER4_I LTR Gypsy -1545 4985 4316 1 747 2878 165 20 14 chrUextra 21266358 21267021 -7737635 + SAR_DM Satellite Satellite 390 1056 -416 1 747 5556 1 1 0 chrUextra 21267128 21267798 -7736858 + R1_DM LINE R1 462 1132 -4224 1 747 5787 1 1 1 chrUextra 21267898 21268568 -7736088 - LSU-rRNA_Dme rRNA rRNA -835 3065 2396 1 747 1662 185 10 7 chrUextra 21268669 21269337 -7735319 + SAR_DM Satellite Satellite 1 669 -582 1 747 1952 160 10 4 chrUextra 21269445 21270108 -7734548 - SAR_DM Satellite Satellite -595 666 1 1 747 5463 22 0 1 chrUextra 21270208 21270878 -7733778 + R1_DM LINE R1 3849 4517 -839 1 747 663 25 0 0 chrUextra 21270978 21271059 -7733597 + CIRCE LINE Composite 4900 4980 -1376 1 747 2547 43 211 9 chrUextra 21271213 21271648 -7733008 - R1_DM LINE R1 -4037 1319 797 1 747 5720 6 0 0 chrUextra 21271748 21272418 -7732238 - DMRT1B LINE R1 -4367 816 147 1 747 688 0 0 0 chrUextra 21272518 21272596 -7732060 - NTS_DM Other Other -162 78 1 1 747 1826 8 17 13 chrUextra 21272596 21272835 -7731821 - NTS_DM Other Other 0 240 1 1 747 1822 8 17 13 chrUextra 21272835 21273074 -7731582 - NTS_DM Other Other 0 240 1 1 747 761 0 35 26 chrUextra 21273074 21273188 -7731468 - NTS_DM Other Other 0 240 126 1 747 22 56 0 0 chrUextra 21273318 21273354 -7731302 + AT_rich Low_complexity Low_complexity 1 36 0 1 747 322 178 50 101 chrUextra 21273399 21273518 -7731138 + Copia_I LTR Copia 4401 4513 -80 1 747 5517 10 8 0 chrUextra 21274058 21274728 -7729928 + DMRT1B LINE R1 509 1183 -4000 1 747 1016 127 72 5 chrUextra 21275277 21275498 -7729158 - DNAREP1_DM LINE Penelope -297 297 62 1 747 5629 15 0 0 chrUextra 21275598 21276268 -7728388 + ROO_I LTR Pao 5205 5874 -2382 1 747 2647 189 28 21 chrUextra 21276369 21277034 -7727622 - SAR_DM Satellite Satellite -662 669 1 1 747 409 19 19 0 chrUextra 21277138 21277190 -7727466 - NTS_DM Other Other -187 53 1 1 747 1438 15 20 20 chrUextra 21277190 21277393 -7727263 - NTS_DM Other Other 0 240 38 1 747 806 19 9 27 chrUextra 21277393 21277504 -7727152 - NTS_DM Other Other -107 133 25 1 747 21 57 0 0 chrUextra 21277530 21277565 -7727091 + AT_rich Low_complexity Low_complexity 1 35 0 1 747 1252 18 0 6 chrUextra 21277565 21277730 -7726926 - NTS_DM Other Other -39 201 38 1 747 606 13 0 0 chrUextra 21277730 21277808 -7726848 - NTS_DM Other Other -107 133 56 1 747 250 33 0 0 chrUextra 21277912 21277942 -7726714 + Baggins1 LINE LOA 4727 4756 -697 1 747 693 103 241 0 chrUextra 21277950 21278095 -7726561 + FB4_DM DNA Tc1 3908 4087 -2 1 747 4148 20 0 0 chrUextra 21278678 21279179 -7725477 - DMRT1B LINE R1 -965 4218 3718 1 747 1443 34 0 0 chrUextra 21279173 21279348 -7725308 - DMRT1B LINE R1 -1572 3611 3437 1 747 2232 184 38 6 chrUextra 21279448 21280110 -7724546 - SAR_DM Satellite Satellite -723 683 1 1 747 268 125 0 0 chrUextra 21280070 21280118 -7724538 + ARS406_DM Unknown Unknown 1 48 -305 1 747 328 109 14 86 chrUextra 21280779 21280849 -7723807 - Gypsy12_LTR LTR Gypsy -2271 65 1 1 747 318 0 0 0 chrUextra 21280849 21280888 -7723768 - Gypsy12_I LTR Gypsy 0 5546 5508 1 747 2912 173 15 9 chrUextra 21280988 21281652 -7723004 - SAR_DM Satellite Satellite -484 988 321 1 747 2561 175 44 12 chrUextra 21281761 21282399 -7722257 - SAR_DM Satellite Satellite -620 852 195 1 747 602 114 70 0 chrUextra 21282314 21282428 -7722228 + ARS406_DM Unknown Unknown 1 122 -231 1 747 3914 38 18 130 chrUextra 21282528 21283198 -7721458 - CIRCE LINE Composite -4616 1740 1146 1 747 2849 182 8 8 chrUextra 21283309 21283968 -7720688 - SAR_DM Satellite Satellite -396 1076 418 1 747 5825 1 1 0 chrUextra 21284068 21284738 -7719918 - SSU-rRNA_Dme rRNA rRNA -909 1086 416 1 747 410 36 0 0 chrUextra 21284838 21284893 -7719763 + ARS406_DM Unknown Unknown 104 158 -195 1 747 1857 187 5 7 chrUextra 21284890 21285310 -7719346 - SAR_DM Satellite Satellite -558 914 496 1 747 657 53 53 0 chrUextra 21285315 21285410 -7719246 + ARS406_DM Unknown Unknown 90 189 -164 1 747 883 113 41 12 chrUextra 21285325 21285495 -7719161 - SAR_DM Satellite Satellite -569 903 729 1 747 5703 0 0 0 chrUextra 21285608 21286278 -7718378 - ACCORD2_I LTR Gypsy -2826 4386 3717 1 747 2561 180 12 4 chrUextra 21286378 21287048 -7717608 + SAR_DM Satellite Satellite 1 674 -1037 1 747 5730 0 0 0 chrUextra 21287151 21287818 -7716838 + G_DM LINE Jockey 3643 4309 -37 1 747 761 96 8 0 chrUextra 21287918 21288043 -7716613 - ARS406_DM Unknown Unknown -227 126 1 1 747 2815 164 9 16 chrUextra 21287950 21288587 -7716069 + SAR_DM Satellite Satellite 195 827 -645 1 747 3620 128 3 20 chrUextra 21288688 21289358 -7715298 - BATUMI_I LTR Pao -5069 2845 2151 1 747 2928 171 9 11 chrUextra 21289458 21290118 -7714538 + SAR_DM Satellite Satellite 418 1076 -396 1 747 399 0 0 0 chrUextra 21290998 21291044 -7713612 + ROVER-LTR_DM LTR Gypsy 322 367 0 1 747 5036 0 0 0 chrUextra 21291044 21291668 -7712988 + ROVER-I_DM LTR Gypsy 1 624 -5960 1 747 685 0 0 0 chrUextra 21291768 21291853 -7712803 + FW_DM LINE Jockey 1679 1763 -2929 1 747 2020 26 4 50 chrUextra 21291853 21292133 -7712523 - MDG3_LTR LTR Gypsy 0 267 1 1 747 2176 7 0 0 chrUextra 21292133 21292438 -7712218 - MDG3_I LTR Gypsy 0 4986 4649 1 747 2455 102 21 9 chrUextra 21292553 21293208 -7711448 - DMSAT6 Satellite Satellite 0 662 1 1 747 2296 162 8 10 chrUextra 21293308 21293793 -7710863 + SAR_DM Satellite Satellite 420 903 -569 1 747 1015 89 0 0 chrUextra 21293800 21293958 -7710698 - ARS406_DM Unknown Unknown -195 158 1 1 747 762 184 0 6 chrUextra 21293808 21293978 -7710678 + SAR_DM Satellite Satellite 496 664 -808 1 747 798 11 0 0 chrUextra 21294078 21294169 -7710487 + (GAGAA)n Simple_repeat Simple_repeat 4 94 0 1 747 1620 0 0 0 chrUextra 21294848 21295092 -7709564 + (CACAA)n Simple_repeat Simple_repeat 1 244 0 1 747 3619 5 0 0 chrUextra 21295092 21295518 -7709138 - DMRT1B LINE R1 -139 5044 4619 1 747 464 0 0 18 chrUextra 21295618 21295675 -7708981 + (CAAGA)n Simple_repeat Simple_repeat 1 56 0 1 747 5698 1 0 3 chrUextra 21297158 21297828 -7706828 - R1_DM LINE R1 -1963 3393 2726 1 747 1192 33 16 37 chrUextra 21297929 21298120 -7706536 - NTS_DM Other Other -16 224 38 1 747 788 37 0 18 chrUextra 21298120 21298230 -7706426 - NTS_DM Other Other -107 133 26 1 747 1226 30 0 6 chrUextra 21298286 21298451 -7706205 - NTS_DM Other Other -39 201 38 1 747 870 9 0 27 chrUextra 21298451 21298563 -7706093 - NTS_DM Other Other -107 133 25 1 747 651 11 0 22 chrUextra 21298698 21298787 -7705869 + BATUMI_I LTR Pao 7877 7963 0 1 747 1909 32 31 38 chrUextra 21298787 21299074 -7705582 + BATUMI_I LTR Pao 7002 7286 -677 1 747 2301 37 0 0 chrUextra 21299072 21299368 -7705288 + STALKER4_I LTR Gypsy 2971 3266 -3264 1 747 2098 62 7 0 chrUextra 21299468 21299756 -7704900 - R1_DM LINE R1 -5066 290 1 1 747 2240 19 155 0 chrUextra 21299789 21300138 -7704518 - R1_DM LINE R1 0 5356 4954 1 747 3149 160 12 9 chrUextra 21300240 21300907 -7703749 - SAR_DM Satellite Satellite -435 1037 369 1 747 4921 55 15 5 chrUextra 21301008 21301678 -7702978 - R1_DM LINE R1 -4503 853 177 1 747 5421 25 0 0 chrUextra 21301778 21302448 -7702208 + HETA LINE telomeric 2519 3188 -2893 1 747 1794 52 32 0 chrUextra 21303320 21303570 -7701086 - QUASIMODO_I LTR Gypsy -5773 287 30 1 747 2249 101 8 31 chrUextra 21303577 21303967 -7700689 - QUASIMODO_LTR LTR Gypsy -51 607 91 1 747 710 0 0 0 chrUextra 21304088 21304171 -7700485 - LSU-rRNA_Dme rRNA rRNA -3817 83 1 1 747 21 95 0 0 chrUextra 21304183 21304246 -7700410 + AT_rich Low_complexity Low_complexity 1 63 0 1 747 34 24 0 0 chrUextra 21304459 21304500 -7700156 + AT_rich Low_complexity Low_complexity 1 41 0 1 747 1582 29 0 0 chrUextra 21304858 21305063 -7699593 + G2_DM LINE Jockey 2898 3102 0 1 747 516 203 233 0 chrUextra 21305185 21305318 -7699338 + TIRANT_I LTR Gypsy 3777 3940 -3752 1 747 2622 189 11 14 chrUextra 21305659 21306293 -7698363 + SAR_DM Satellite Satellite 377 1008 -464 1 747 4818 43 48 1 chrUextra 21306400 21307068 -7697588 - TART LINE telomeric -11609 2868 2170 1 747 5676 6 0 1 chrUextra 21307168 21307838 -7696818 + FW_DM LINE Jockey 208 876 -3816 1 747 3130 163 12 9 chrUextra 21307938 21308608 -7696048 + SAR_DM Satellite Satellite 348 1019 -453 1 747 388 22 0 0 chrUextra 21308708 21308754 -7695902 - LSU-rRNA_Dme rRNA rRNA -1215 2685 2640 1 747 2728 9 0 0 chrUextra 21308752 21309070 -7695586 - R1_DM LINE R1 0 5356 5039 1 747 2565 7 0 0 chrUextra 21309081 21309378 -7695278 - R1_DM LINE R1 0 5356 5060 1 747 850 8 31 24 chrUextra 21309479 21309606 -7695050 + NTS_DM Other Other 113 240 0 1 747 1290 6 0 18 chrUextra 21309606 21309771 -7694885 + NTS_DM Other Other 1 162 -78 1 747 488 119 36 0 chrUextra 21309881 21309965 -7694691 + NTS_DM Other Other 4 90 -150 1 747 3181 23 3 0 chrUextra 21310248 21310640 -7694016 + R1_DM LINE R1 4674 5066 -290 1 747 954 26 0 0 chrUextra 21310637 21310751 -7693905 + R1_DM LINE R1 5243 5356 0 1 747 973 60 8 0 chrUextra 21310784 21310918 -7693738 + R1_DM LINE R1 1 135 -5221 1 747 1011 11 3 3 chrUextra 21311018 21311234 -7693422 + TABOR_I LTR Gypsy 6009 6336 0 1 747 3953 0 2 2 chrUextra 21311232 21311688 -7692968 + TABOR_LTR LTR Gypsy 1 456 -50 1 747 2646 181 37 21 chrUextra 21312558 21313228 -7691428 - SAR_DM Satellite Satellite -354 1118 438 1 747 2732 176 21 14 chrUextra 21313334 21313985 -7690671 - SAR_DM Satellite Satellite -593 879 224 1 747 229 217 87 0 chrUextra 21313929 21313998 -7690658 + ARS406_DM Unknown Unknown 1 75 -278 1 747 1727 58 0 0 chrUextra 21314321 21314547 -7690109 + PROTOP_A DNA P 74 299 -806 1 747 1198 46 90 0 chrUextra 21314534 21314768 -7689888 + PROTOP_B DNA P 520 754 -399 1 747 332 0 0 0 chrUextra 21314869 21314907 -7689749 + SSU-rRNA_Dme rRNA rRNA 1958 1995 0 1 747 21 89 0 0 chrUextra 21314926 21314982 -7689674 + AT_rich Low_complexity Low_complexity 1 56 0 1 747 1239 52 62 0 chrUextra 21315638 21315986 -7688670 - PROTOP_B DNA P -399 754 506 1 747 2100 53 72 0 chrUextra 21315988 21316308 -7688348 - PROTOP_A DNA P -129 976 634 1 747 2605 37 28 34 chrUextra 21316408 21317078 -7687578 + DM176_I LTR Gypsy 151 761 -5659 1 747 388 22 0 0 chrUextra 21317178 21317224 -7687432 - LSU-rRNA_Dme rRNA rRNA -1215 2685 2640 1 747 5355 5 0 2 chrUextra 21317222 21317848 -7686808 - R1_DM LINE R1 0 5356 4732 1 747 5759 0 0 1 chrUextra 21317948 21318618 -7686038 - R1_DM LINE R1 -3188 2168 1500 1 747 22 56 0 0 chrUextra 21318777 21318813 -7685843 + AT_rich Low_complexity Low_complexity 1 36 0 1 747 255 125 0 0 chrUextra 21318826 21318866 -7685790 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 747 246 150 0 0 chrUextra 21318909 21318949 -7685707 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 747 246 150 0 0 chrUextra 21319001 21319041 -7685615 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 747 246 150 0 0 chrUextra 21319093 21319133 -7685523 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 747 246 150 0 0 chrUextra 21319185 21319225 -7685431 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 747 29 28 0 0 chrUextra 21319230 21319266 -7685390 + AT_rich Low_complexity Low_complexity 1 36 0 1 747 365 0 0 0 chrUextra 21319346 21319388 -7685268 - LSU-rRNA_Dme rRNA rRNA 0 3900 3859 1 747 619 12 12 36 chrUextra 21319488 21319572 -7685084 - NTS_DM Other Other -134 106 25 1 747 1252 18 0 6 chrUextra 21319624 21319789 -7684867 - NTS_DM Other Other -39 201 38 1 747 870 9 0 27 chrUextra 21319789 21319901 -7684755 - NTS_DM Other Other -107 133 25 1 747 22 56 0 0 chrUextra 21319927 21319963 -7684693 + AT_rich Low_complexity Low_complexity 1 36 0 1 747 230 150 0 0 chrUextra 21319976 21320016 -7684640 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 747 246 150 0 0 chrUextra 21320059 21320099 -7684557 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 747 3494 54 44 0 chrUextra 21320258 21320754 -7683902 + PROTOP_A DNA P 588 1105 0 1 747 5702 1 0 5 chrUextra 21321028 21321698 -7682958 - FW_DM LINE Jockey -457 4235 3569 1 747 2514 46 80 17 chrUextra 21321798 21322149 -7682507 - BATUMI_I LTR Pao -2143 5820 5448 1 747 749 31 0 0 chrUextra 21322342 21322438 -7682218 - DMCR1A LINE CR1 0 4470 4375 1 747 5703 1 1 5 chrUextra 21322568 21323238 -7681418 - LSU-rRNA_Dme rRNA rRNA -2482 1418 751 1 747 1726 17 21 21 chrUextra 21323342 21323582 -7681074 - NTS_DM Other Other 0 240 1 1 747 1734 21 17 17 chrUextra 21323582 21323822 -7680834 - NTS_DM Other Other 0 240 1 1 747 1258 16 21 21 chrUextra 21323822 21324008 -7680648 - NTS_DM Other Other 0 240 55 1 747 571 148 40 16 chrUextra 21324157 21324281 -7680375 + DMTOM1_LTR LTR Gypsy 284 410 0 1 747 391 113 0 27 chrUextra 21324281 21324345 -7680311 + DMTOM1_LTR LTR Gypsy 349 410 0 1 747 265 240 23 76 chrUextra 21324345 21324476 -7680180 + ROVER-I_DM LTR Gypsy 1 124 -6460 1 747 234 291 12 29 chrUextra 21324595 21324765 -7679891 + (TAAA)n Simple_repeat Simple_repeat 2 168 0 1 747 5816 1 0 1 chrUextra 21324878 21325548 -7679108 - LSU-rRNA_Dme rRNA rRNA -798 3102 2434 1 747 1803 8 17 17 chrUextra 21325655 21325895 -7678761 - NTS_DM Other Other 0 240 1 1 747 1843 4 17 13 chrUextra 21325895 21326134 -7678522 - NTS_DM Other Other 0 240 1 1 747 1319 6 22 16 chrUextra 21326134 21326318 -7678338 - NTS_DM Other Other 0 240 56 1 747 21 57 0 0 chrUextra 21326754 21326789 -7677867 + AT_rich Low_complexity Low_complexity 1 35 0 1 747 34 24 0 0 chrUextra 21327298 21327339 -7677317 + AT_rich Low_complexity Low_complexity 1 41 0 1 747 1265 191 230 43 chrUextra 21327349 21327858 -7676798 - HETA LINE telomeric -171 5910 5307 1 747 228 227 53 0 chrUextra 21327958 21328033 -7676623 - HETA LINE telomeric -1511 4570 4492 1 747 23 0 0 0 chrUextra 21328086 21328109 -7676547 + AT_rich Low_complexity Low_complexity 1 23 0 1 747 2249 49 0 0 chrUextra 21328151 21328438 -7676218 - PROTOP DNA P -4120 360 74 1 747 5826 1 1 0 chrUextra 21328728 21329398 -7675258 - LSU-rRNA_Dme rRNA rRNA -1391 2509 1839 1 747 2093 12 0 0 chrUextra 21329498 21329741 -7674915 - LSU-rRNA_Dme rRNA rRNA -1018 2882 2640 1 747 3643 14 0 0 chrUextra 21329739 21330168 -7674488 - R1_DM LINE R1 0 5356 4928 1 747 2329 4 0 4 chrUextra 21330268 21330546 -7674110 - LSU-rRNA_Dme rRNA rRNA -1433 2467 2191 1 747 246 150 0 0 chrUextra 21330598 21330638 -7674018 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 747 246 150 0 0 chrUextra 21330690 21330730 -7673926 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 747 246 150 0 0 chrUextra 21330782 21330822 -7673834 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 747 22 56 0 0 chrUextra 21330827 21330863 -7673793 + AT_rich Low_complexity Low_complexity 1 36 0 1 747 5229 22 6 5 chrUextra 21331038 21331708 -7672948 - PROTOP_A DNA P -386 719 49 1 747 3248 199 0 0 chrUextra 21331808 21332478 -7672178 + ROVER-I_DM LTR Gypsy 2915 3584 -3000 1 747 3723 16 2 0 chrUextra 21332578 21333006 -7671650 - FW_DM LINE Jockey -3670 1022 594 1 747 1156 42 0 0 chrUextra 21333012 21333154 -7671502 - R1_DM LINE R1 -2242 3114 2973 1 747 743 53 0 0 chrUextra 21333153 21333248 -7671408 + FW_DM LINE Jockey 353 447 -4245 1 747 644 0 14 0 chrUextra 21333352 21333425 -7671231 - NTS_DM Other Other -166 74 1 1 747 1910 0 17 17 chrUextra 21333425 21333665 -7670991 - NTS_DM Other Other 0 240 1 1 747 1904 8 17 13 chrUextra 21333665 21333904 -7670752 - NTS_DM Other Other 0 240 1 1 747 794 0 35 26 chrUextra 21333904 21334018 -7670638 - NTS_DM Other Other 0 240 126 1 747 6117 1 0 0 chrUextra 21334118 21334788 -7669868 - SSU-rRNA_Dme rRNA rRNA -924 1071 402 1 747 5512 35 10 10 chrUextra 21334888 21335558 -7669098 - BATUMI_I LTR Pao -1588 6375 5706 1 747 3066 87 84 34 chrUextra 21335665 21336226 -7668430 - BATUMI_I LTR Pao -7374 589 1 1 747 833 20 0 10 chrUextra 21336226 21336327 -7668329 - BATUMI_I LTR Pao -679 7284 7185 1 747 5244 5 0 0 chrUextra 21336428 21337010 -7667646 - R1_DM LINE R1 -422 4934 4353 1 747 838 11 0 0 chrUextra 21337005 21337098 -7667558 - LSU-rRNA_Dme rRNA rRNA -1248 2652 2560 1 747 615 11 0 33 chrUextra 21337198 21337289 -7667367 + NTS_DM Other Other 75 162 -78 1 747 514 119 36 0 chrUextra 21337399 21337483 -7667173 + NTS_DM Other Other 4 90 -150 1 747 28 48 0 0 chrUextra 21337756 21337798 -7666858 + AT_rich Low_complexity Low_complexity 1 42 0 1 747 4253 72 8 5 chrUextra 21337968 21338638 -7666018 + G2_DM LINE Jockey 4 483 -2619 1 747 773 159 38 21 chrUextra 21339222 21339408 -7665248 - Stalker2_I LTR Gypsy -6520 882 694 1 747 2938 180 30 14 chrUextra 21339509 21340178 -7664478 + SAR_DM Satellite Satellite 195 874 -598 1 747 5096 45 18 0 chrUextra 21340278 21340948 -7663708 - TART_B1 LINE telomeric -7112 3542 2761 1 747 6092 3 0 0 chrUextra 21341048 21341718 -7662938 + LSU-rRNA_Dme rRNA rRNA 1972 2641 -1259 1 747 3006 3 0 0 chrUextra 21341834 21342164 -7662492 - TRANSPAC_LTR LTR Gypsy 0 330 1 1 747 2604 6 0 6 chrUextra 21342163 21342488 -7662168 - TRANSPAC_I LTR Gypsy 0 4590 4268 1 747 2655 178 13 5 chrUextra 21342591 21343146 -7661510 - SAR_DM Satellite Satellite -620 852 294 1 747 869 51 8 0 chrUextra 21343140 21343258 -7661398 + ARS406_DM Unknown Unknown 62 180 -173 1 747 2990 0 0 0 chrUextra 21343358 21343682 -7660974 - ROO_LTR LTR Pao -104 324 1 1 747 3482 256 32 49 chrUextra 21344151 21345538 -7659118 - SAR_DM Satellite Satellite -396 1363 1 1 747 726 291 20 10 chrUextra 21345273 21345568 -7659088 + XDMR_DM Unknown Unknown 6 303 -57 1 747 4931 29 47 0 chrUextra 21345668 21346264 -7658392 + DMCR1A LINE CR1 3847 4470 0 1 747 315 26 0 0 chrUextra 21346300 21346338 -7658318 + DOC2_DM LINE Jockey 1566 1603 -3190 1 747 5477 46 1 1 chrUextra 21346438 21347108 -7657548 + R1_DM LINE R1 1072 1741 -3615 1 747 5825 6 6 0 chrUextra 21347208 21347878 -7656778 - DMRT1B LINE R1 -3874 1309 636 1 747 6077 5 1 0 chrUextra 21347978 21348648 -7656008 + R2_DM LINE R2 2694 3364 -243 1 747 511 31 0 0 chrUextra 21348748 21348813 -7655843 - ALUII_DM Unknown Unknown -175 65 1 1 747 22 35 0 0 chrUextra 21349045 21349074 -7655582 + AT_rich Low_complexity Low_complexity 1 29 0 1 747 37 39 0 0 chrUextra 21349176 21349227 -7655429 + AT_rich Low_complexity Low_complexity 1 51 0 1 747 21 0 0 0 chrUextra 21349941 21349962 -7654694 + AT_rich Low_complexity Low_complexity 1 21 0 1 747 274 31 0 0 chrUextra 21349978 21350010 -7654646 - NTS_DM Other Other -207 33 2 1 747 4217 56 17 17 chrUextra 21350290 21350958 -7653698 - PROTOP DNA P -79 4401 3892 1 747 6101 0 1 1 chrUextra 21351058 21351728 -7652928 - LSU-rRNA_Dme rRNA rRNA 0 3900 3231 1 747 34 24 0 0 chrUextra 21352054 21352095 -7652561 + AT_rich Low_complexity Low_complexity 1 41 0 1 747 3178 163 11 14 chrUextra 21353373 21354033 -7650623 - SAR_DM Satellite Satellite -569 903 246 1 747 246 156 0 0 chrUextra 21353993 21354038 -7650618 + ARS406_DM Unknown Unknown 1 45 -308 1 747 702 0 0 0 chrUextra 21354138 21354216 -7650440 + (GAGAA)n Simple_repeat Simple_repeat 4 81 0 1 747 3426 258 43 27 chrUextra 21354908 21356346 -7648310 + SAR_DM Satellite Satellite 1 1461 -225 1 747 5288 2 0 2 chrUextra 21356538 21357118 -7647538 + SSU-rRNA_Dme rRNA rRNA 1 579 -1416 1 747 1067 192 30 14 chrUextra 21357997 21358658 -7645998 - SAR_DM Satellite Satellite -680 671 1 1 747 3434 204 3 0 chrUextra 21358758 21359426 -7645230 + ROVER-I_DM LTR Gypsy 2340 3009 -3575 1 747 2697 225 24 16 chrUextra 21359530 21360198 -7644458 - ROVER-I_DM LTR Gypsy -4031 2553 1881 1 747 4218 58 16 7 chrUextra 21360298 21360854 -7643802 + DMCR1A LINE CR1 3674 4234 -236 1 747 768 98 18 0 chrUextra 21360856 21360968 -7643688 + DMCR1A LINE CR1 4353 4466 -4 1 747 1683 69 8 29 chrUextra 21361499 21361738 -7642918 - Baggins1 LINE LOA -262 5191 4958 1 747 3120 185 14 5 chrUextra 21361840 21362508 -7642148 - SAR_DM Satellite Satellite -593 879 206 1 747 5697 22 5 1 chrUextra 21362609 21363278 -7641378 - R1_DM LINE R1 -286 5070 4400 1 747 5869 16 0 0 chrUextra 21363378 21364048 -7640608 - DMRT1B LINE R1 -1566 3617 2948 1 93 3024 162 37 17 chrUextra 21364148 21364801 -7639855 - SAR_DM Satellite Satellite -486 986 321 1 748 456 319 20 16 chrUextra 21365105 21365376 -7639280 - GTWIN_I LTR Gypsy -2883 3538 3234 1 748 534 291 33 30 chrUextra 21365368 21365588 -7639068 - GTWIN_I LTR Gypsy -2914 3507 3232 1 748 21 89 0 0 chrUextra 21366034 21366090 -7638566 + AT_rich Low_complexity Low_complexity 1 56 0 1 748 2269 0 4 0 chrUextra 21366109 21366358 -7638298 - SSU-rRNA_Dme rRNA rRNA 0 1995 1746 1 748 5887 12 0 8 chrUextra 21367228 21367897 -7636759 + Gypsy12_I LTR Gypsy 805 1468 -4078 1 748 5751 31 0 0 chrUextra 21367998 21368668 -7635988 - R1_DM LINE R1 -3368 1988 1319 1 748 1487 207 44 5 chrUextra 21368770 21369438 -7635218 - SAR_DM Satellite Satellite -727 694 1 1 748 5791 12 9 1 chrUextra 21369538 21370208 -7634448 - Copia2_I LTR Copia -3273 889 215 1 748 249 32 0 0 chrUextra 21370308 21370339 -7634317 + ARS406_DM Unknown Unknown 129 159 -194 1 748 1851 165 16 8 chrUextra 21370345 21370974 -7633682 - SAR_DM Satellite Satellite -569 634 1 1 748 31 26 0 0 chrUextra 21371391 21371429 -7633227 + AT_rich Low_complexity Low_complexity 1 38 0 1 748 426 58 0 0 chrUextra 21371848 21371900 -7632756 - NTS_DM Other Other -158 82 31 1 748 890 18 0 27 chrUextra 21371892 21372004 -7632652 - NTS_DM Other Other -107 133 25 1 748 1304 18 0 6 chrUextra 21372056 21372221 -7632435 - NTS_DM Other Other -39 201 38 1 748 907 9 0 27 chrUextra 21372221 21372333 -7632323 - NTS_DM Other Other -107 133 25 1 748 22 56 0 0 chrUextra 21372359 21372395 -7632261 + AT_rich Low_complexity Low_complexity 1 36 0 1 748 269 125 0 0 chrUextra 21372408 21372448 -7632208 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 748 3464 20 2 0 chrUextra 21372618 21373019 -7631637 + DIVER2_I LTR Pao 3746 4147 0 1 748 2287 26 0 11 chrUextra 21373019 21373288 -7631368 + DIVER2_LTR LTR Pao 1 266 -119 1 748 595 32 21 11 chrUextra 21373388 21373483 -7631173 + NTS_DM Other Other 106 201 -39 1 748 907 9 0 27 chrUextra 21373535 21373647 -7631009 + NTS_DM Other Other 25 133 -107 1 748 1304 18 0 6 chrUextra 21373647 21373812 -7630844 + NTS_DM Other Other 38 201 -39 1 748 21 57 0 0 chrUextra 21373812 21373847 -7630809 + AT_rich Low_complexity Low_complexity 1 35 0 1 748 870 9 9 27 chrUextra 21373873 21373984 -7630672 + NTS_DM Other Other 25 133 -107 1 748 644 14 0 0 chrUextra 21373984 21374058 -7630598 + NTS_DM Other Other 38 111 -129 1 748 3010 182 16 9 chrUextra 21374158 21374828 -7629828 - SAR_DM Satellite Satellite -496 976 302 1 748 2217 4 4 0 chrUextra 21374928 21375187 -7629469 - Copia_LTR LTR Copia -16 260 1 1 748 524 115 31 0 chrUextra 21375264 21375360 -7629296 - PROTOP DNA P -861 3619 3521 1 748 1191 27 0 0 chrUextra 21375698 21375845 -7628811 + (TCTTG)n Simple_repeat Simple_repeat 4 150 0 1 748 2946 196 6 5 chrUextra 21376471 21377126 -7627530 - SAR_DM Satellite Satellite -593 879 224 1 748 407 149 0 0 chrUextra 21377064 21377138 -7627518 + ARS406_DM Unknown Unknown 1 74 -279 1 748 365 199 99 62 chrUextra 21377240 21377401 -7627255 + DMCR1A LINE CR1 4263 4429 -41 1 748 21 0 0 0 chrUextra 21377523 21377544 -7627112 + AT_rich Low_complexity Low_complexity 1 21 0 1 748 766 103 0 0 chrUextra 21378008 21378125 -7626531 - ARS406_DM Unknown Unknown -236 117 1 1 748 2786 191 22 8 chrUextra 21378032 21378676 -7625980 + SAR_DM Satellite Satellite 195 847 -625 1 748 892 90 0 0 chrUextra 21378778 21378911 -7625745 - ARS406_DM Unknown Unknown -220 133 1 1 748 2965 183 5 6 chrUextra 21378815 21379448 -7625208 + SAR_DM Satellite Satellite 192 823 -649 1 748 2877 188 10 22 chrUextra 21379548 21380218 -7624438 + SAR_DM Satellite Satellite 446 1107 -365 1 748 291 0 0 0 chrUextra 21380318 21380352 -7624304 - R1_DM LINE R1 -5322 34 1 1 748 5532 2 0 25 chrUextra 21380352 21380987 -7623669 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2014 1 748 2754 177 31 23 chrUextra 21381087 21381740 -7622916 + SAR_DM Satellite Satellite 462 1119 -353 1 748 305 174 49 39 chrUextra 21381654 21381756 -7622900 - XDMR_DM Unknown Unknown 0 360 258 1 748 21 89 0 0 chrUextra 21382360 21382416 -7622240 + AT_rich Low_complexity Low_complexity 1 56 0 1 748 776 0 0 11 chrUextra 21382435 21382525 -7622131 - SSU-rRNA_Dme rRNA rRNA 0 1995 1907 1 748 5902 11 5 0 chrUextra 21382625 21383294 -7621362 - R1_DM LINE R1 -389 4967 4296 1 748 1116 7 14 20 chrUextra 21383394 21383540 -7621116 + NTS_DM Other Other 18 162 -78 1 748 514 119 36 0 chrUextra 21383650 21383734 -7620922 + NTS_DM Other Other 4 90 -150 1 748 28 48 0 0 chrUextra 21384007 21384049 -7620607 + AT_rich Low_complexity Low_complexity 1 42 0 1 748 5945 0 0 3 chrUextra 21384163 21384832 -7619824 + DOC LINE Jockey 1670 2336 -2389 1 748 22 35 0 0 chrUextra 21385023 21385052 -7619604 + AT_rich Low_complexity Low_complexity 1 29 0 1 748 37 39 0 0 chrUextra 21385153 21385204 -7619452 + AT_rich Low_complexity Low_complexity 1 51 0 1 748 28 48 0 0 chrUextra 21385559 21385601 -7619055 + AT_rich Low_complexity Low_complexity 1 42 0 1 748 2893 180 15 11 chrUextra 21385702 21386359 -7618297 - SAR_DM Satellite Satellite -633 839 180 1 748 5577 30 1 0 chrUextra 21386470 21387139 -7617517 + HETA LINE telomeric 2516 3185 -2896 1 748 5983 5 0 0 chrUextra 21387239 21387908 -7616748 - DOC LINE Jockey -2820 1905 1237 1 748 2973 221 50 16 chrUextra 21388777 21390215 -7614441 - SAR_DM Satellite Satellite -443 1486 1 1 748 667 11 11 33 chrUextra 21390315 21390405 -7614251 - NTS_DM Other Other -128 112 25 1 748 21 57 0 0 chrUextra 21390431 21390466 -7614190 + AT_rich Low_complexity Low_complexity 1 35 0 1 748 1252 18 0 6 chrUextra 21390466 21390631 -7614025 - NTS_DM Other Other -39 201 38 1 748 852 18 0 27 chrUextra 21390631 21390743 -7613913 - NTS_DM Other Other -107 133 25 1 748 21 57 0 0 chrUextra 21390769 21390804 -7613852 + AT_rich Low_complexity Low_complexity 1 35 0 1 748 1252 18 0 6 chrUextra 21390804 21390969 -7613687 - NTS_DM Other Other -39 201 38 1 748 518 108 81 0 chrUextra 21391123 21391234 -7613422 + TART LINE telomeric 10370 10489 -3988 1 748 34 24 0 0 chrUextra 21391247 21391288 -7613368 + AT_rich Low_complexity Low_complexity 1 41 0 1 748 1167 7 0 0 chrUextra 21392112 21392247 -7612409 - 5S_DM RNA RNA 0 135 1 1 748 243 0 0 0 chrUextra 21392488 21392518 -7612138 - 5S_DM RNA RNA 0 135 106 1 748 5595 21 0 0 chrUextra 21392622 21393291 -7611365 + R1_DM LINE R1 3999 4667 -689 1 748 1694 23 0 14 chrUextra 21393841 21394060 -7610596 - QUASIMODO_LTR LTR Gypsy 0 658 443 1 748 2203 0 0 4 chrUextra 21394160 21394419 -7610237 - R1_DM LINE R1 -299 5057 4800 1 748 3512 0 0 0 chrUextra 21394426 21394829 -7609827 - R1_DM LINE R1 0 5356 4954 1 748 34 24 0 0 chrUextra 21395195 21395236 -7609420 + AT_rich Low_complexity Low_complexity 1 41 0 1 748 5537 17 0 0 chrUextra 21395703 21396367 -7608289 + QUASIMODO_I LTR Gypsy 412 1075 -4985 1 748 5624 0 1 1 chrUextra 21396467 21397136 -7607520 + ROO_I LTR Pao 1593 2261 -5995 1 748 5658 8 1 5 chrUextra 21397237 21397905 -7606751 - SSU-rRNA_Dme rRNA rRNA -327 1668 1003 1 748 5588 16 0 1 chrUextra 21398005 21398674 -7605982 - FW_DM LINE Jockey -694 3998 3331 1 748 2865 172 11 11 chrUextra 21398781 21399440 -7605216 - SAR_DM Satellite Satellite -532 940 282 1 748 5558 16 0 3 chrUextra 21399543 21400212 -7604444 + Invader3_I LTR Gypsy 3658 4324 -564 1 748 2269 165 8 26 chrUextra 21400312 21400815 -7603841 + SAR_DM Satellite Satellite 421 914 -558 1 748 1040 82 0 0 chrUextra 21400812 21400970 -7603686 - ARS406_DM Unknown Unknown -195 158 1 1 748 386 209 0 19 chrUextra 21400874 21400981 -7603675 + SAR_DM Satellite Satellite 192 296 -1176 1 748 2175 148 48 10 chrUextra 21401081 21401560 -7603096 + ROVER-I_DM LTR Gypsy 6088 6584 0 1 748 1094 97 32 21 chrUextra 21401560 21401750 -7602906 + ROVER-LTR_DM LTR Gypsy 1 192 -175 1 748 2836 170 16 15 chrUextra 21401850 21402519 -7602137 - SAR_DM Satellite Satellite -560 912 243 1 748 2832 218 44 15 chrUextra 21402619 21404057 -7600599 + SAR_DM Satellite Satellite 1 1479 -404 1 748 2781 179 9 19 chrUextra 21404157 21404825 -7599831 + SAR_DM Satellite Satellite 447 1107 -365 1 748 2469 90 24 15 chrUextra 21404926 21405592 -7599064 - DMSAT6 Satellite Satellite -32 671 1 1 748 2664 176 8 11 chrUextra 21405695 21406322 -7598334 - SAR_DM Satellite Satellite -653 819 195 1 748 868 96 0 0 chrUextra 21406229 21406364 -7598292 + ARS406_DM Unknown Unknown 1 135 -218 1 748 5156 52 1 0 chrUextra 21406464 21407132 -7597524 - BATUMI_I LTR Pao -2892 5071 4403 1 748 5343 19 21 8 chrUextra 21407233 21407902 -7596754 + FW_DM LINE Jockey 3830 4507 -185 1 748 2886 177 9 11 chrUextra 21408002 21408671 -7595985 + SAR_DM Satellite Satellite 209 876 -596 1 748 5630 0 1 0 chrUextra 21408771 21409440 -7595216 - ROO_I LTR Pao -3259 4997 4328 1 748 3217 164 8 6 chrUextra 21409541 21410209 -7594447 + SAR_DM Satellite Satellite 369 1037 -435 1 748 1845 218 80 36 chrUextra 21410309 21410946 -7593710 + TAHRE LINE telomeric 9370 10034 -429 1 748 5410 12 43 0 chrUextra 21411079 21411747 -7592909 + Invader4_I LTR Gypsy 1152 1848 -565 1 748 1459 243 51 48 chrUextra 21411848 21412513 -7592143 - SAR_DM Satellite Satellite -640 666 1 1 748 744 118 0 0 chrUextra 21412616 21412743 -7591913 - ARS406_DM Unknown Unknown -226 127 1 1 748 2715 182 9 8 chrUextra 21412650 21413285 -7591371 + SAR_DM Satellite Satellite 195 830 -642 1 748 1079 299 3 3 chrUextra 21413672 21414048 -7590608 + Copia2_I LTR Copia 2595 2970 -1192 1 748 5683 1 1 1 chrUextra 21414154 21414823 -7589833 + R1_DM LINE R1 1068 1736 -3620 1 748 291 232 0 0 chrUextra 21414939 21415008 -7589648 + BS2 LINE Jockey 4146 4214 -507 1 748 212 0 0 35 chrUextra 21415548 21415577 -7589079 + (TTA)n Simple_repeat Simple_repeat 2 29 0 1 748 1256 20 0 7 chrUextra 21415692 21415844 -7588812 + (CACAA)n Simple_repeat Simple_repeat 3 153 0 1 748 4428 4 0 0 chrUextra 21415844 21416361 -7588295 - DMRT1B LINE R1 -140 5043 4527 1 748 2934 184 8 6 chrUextra 21416461 21417128 -7587528 + SAR_DM Satellite Satellite 256 923 -549 1 748 2933 172 14 8 chrUextra 21417230 21417885 -7586771 + SAR_DM Satellite Satellite 403 1061 -411 1 748 2434 176 20 25 chrUextra 21418000 21418613 -7586043 + SAR_DM Satellite Satellite 185 794 -678 1 748 393 53 18 0 chrUextra 21418610 21418667 -7585989 - ARS406_DM Unknown Unknown -194 159 102 1 748 5879 0 0 0 chrUextra 21418768 21419437 -7585219 - Gypsy6_I LTR Gypsy -2535 4477 3809 1 748 1930 0 0 0 chrUextra 21419581 21419803 -7584853 - LSU-rRNA_Dme rRNA rRNA -3678 222 1 1 748 21 95 0 0 chrUextra 21419815 21419878 -7584778 + AT_rich Low_complexity Low_complexity 1 63 0 1 748 34 24 0 0 chrUextra 21420091 21420132 -7584524 + AT_rich Low_complexity Low_complexity 1 41 0 1 748 4377 18 2 54 chrUextra 21420306 21420895 -7583761 - CIRCE LINE Composite -4494 1862 1305 1 748 463 324 18 18 chrUextra 21420738 21420961 -7583695 - Gypsy12_I LTR Gypsy -2177 3369 3147 1 748 5719 5 0 0 chrUextra 21421075 21421744 -7582912 + DMRT1B LINE R1 4130 4798 -385 1 748 4906 54 0 5 chrUextra 21421846 21422513 -7582143 + STALKER4_I LTR Gypsy 4680 5343 -1187 1 748 2463 229 24 14 chrUextra 21422613 21423282 -7581374 - G_DM LINE Jockey -2776 1570 895 1 748 2752 174 12 16 chrUextra 21423382 21424024 -7580632 - SAR_DM Satellite Satellite -641 831 192 1 748 783 89 8 0 chrUextra 21423928 21424051 -7580605 + ARS406_DM Unknown Unknown 1 124 -229 1 748 2395 93 14 16 chrUextra 21424151 21424820 -7579836 - DMSAT6 Satellite Satellite -90 667 1 1 748 999 32 0 0 chrUextra 21425466 21425589 -7579067 + (CAAAA)n Simple_repeat Simple_repeat 2 124 0 1 748 3316 0 0 3 chrUextra 21425689 21426071 -7578585 + LSU-rRNA_Dme rRNA rRNA 3520 3900 0 1 748 22 56 0 0 chrUextra 21426143 21426179 -7578477 + AT_rich Low_complexity Low_complexity 1 36 0 1 748 246 150 0 0 chrUextra 21426184 21426224 -7578432 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 748 21 57 0 0 chrUextra 21426237 21426272 -7578384 + AT_rich Low_complexity Low_complexity 1 35 0 1 748 246 150 0 0 chrUextra 21426277 21426317 -7578339 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 748 4905 63 3 6 chrUextra 21426458 21427127 -7577529 - BATUMI_I LTR Pao -3939 4024 3358 1 748 5673 1 1 1 chrUextra 21427227 21427896 -7576760 - R1_DM LINE R1 -3633 1723 1055 1 748 2802 179 12 21 chrUextra 21427996 21428665 -7575991 + SAR_DM Satellite Satellite 200 862 -610 1 748 5618 16 0 0 chrUextra 21428765 21429434 -7575222 + Invader3_I LTR Gypsy 1927 2595 -2293 1 748 2500 186 8 58 chrUextra 21429534 21430203 -7574453 - SAR_DM Satellite Satellite -396 1076 442 1 748 1998 163 9 2 chrUextra 21431085 21431521 -7573135 - ROVER-I_DM LTR Gypsy -156 6428 5990 1 748 1093 135 0 0 chrUextra 21431556 21431741 -7572915 - ROVER-I_DM LTR Gypsy -1276 5308 5124 1 748 3053 165 11 9 chrUextra 21431842 21432502 -7572154 - SAR_DM Satellite Satellite -478 994 334 1 748 1069 70 515 6 chrUextra 21433384 21433728 -7570928 + PROTOP_B DNA P 336 856 -297 1 748 2109 94 0 3 chrUextra 21433736 21434044 -7570612 - Jockey2 LINE Jockey -1608 1820 1514 1 748 3616 36 95 0 chrUextra 21434148 21434645 -7570011 - PROTOP DNA P -3936 544 1 1 748 5512 18 0 0 chrUextra 21434917 21435586 -7569070 + QUASIMODO_I LTR Gypsy 2456 3124 -2936 1 748 4857 66 1 8 chrUextra 21435686 21436355 -7568301 + BATUMI_I LTR Pao 3395 4059 -3904 1 748 5756 6 0 0 chrUextra 21436455 21437124 -7567532 - R1_DM LINE R1 -544 4812 4144 1 748 1755 15 0 0 chrUextra 21437224 21437430 -7567226 + PROTOP_B DNA P 952 1153 0 1 748 3881 9 4 2 chrUextra 21437430 21437893 -7566763 - TART LINE telomeric -3953 10524 10061 1 748 2179 161 134 14 chrUextra 21437994 21438662 -7565994 - TART LINE telomeric -783 9680 8996 1 748 2072 169 34 38 chrUextra 21438859 21439388 -7565268 - Gypsy12A_LTR LTR Gypsy -989 1291 765 1 748 21 0 0 0 chrUextra 21439392 21439413 -7565243 + AT_rich Low_complexity Low_complexity 1 21 0 1 748 331 45 0 0 chrUextra 21439531 21439575 -7565081 - ARS406_DM Unknown Unknown -220 133 90 1 748 2603 184 5 19 chrUextra 21439580 21440200 -7564456 + SAR_DM Satellite Satellite 496 1106 -366 1 748 2671 161 9 9 chrUextra 21440300 21440969 -7563687 - SAR_DM Satellite Satellite -610 669 1 1 748 2732 26 3 0 chrUextra 21441069 21441410 -7563246 + R1_DM LINE R1 4725 5066 -290 1 748 943 35 0 0 chrUextra 21441407 21441521 -7563135 + R1_DM LINE R1 5243 5356 0 1 748 1315 76 5 0 chrUextra 21441554 21441738 -7562918 + R1_DM LINE R1 1 185 -5171 1 748 514 0 0 13 chrUextra 21441838 21441917 -7562739 + HMSBEAGLE_I LTR Gypsy 719 796 -5733 1 748 953 35 52 12 chrUextra 21441917 21442089 -7562567 + (TTA)n Simple_repeat Simple_repeat 1 179 0 1 748 3570 0 0 0 chrUextra 21442089 21442507 -7562149 + HMSBEAGLE_I LTR Gypsy 969 1386 -5143 1 748 186 71 0 0 chrUextra 21442833 21442861 -7561795 + (GAA)n Simple_repeat Simple_repeat 3 30 0 1 748 3095 177 8 8 chrUextra 21444151 21444795 -7559861 - SAR_DM Satellite Satellite -634 838 195 1 748 748 107 0 0 chrUextra 21444702 21444814 -7559842 + ARS406_DM Unknown Unknown 1 112 -241 1 748 6116 1 6 0 chrUextra 21444915 21445583 -7559073 + LSU-rRNA_Dme rRNA rRNA 2324 2995 -905 1 748 5801 28 14 0 chrUextra 21445683 21446352 -7558304 + FROGGER_I LTR Copia 1289 1966 -111 1 748 2964 182 8 22 chrUextra 21447990 21448658 -7555998 - SAR_DM Satellite Satellite -359 1113 456 1 748 5288 15 2 2 chrUextra 21449528 21450123 -7554533 + R1_DM LINE R1 4762 5356 0 1 748 354 24 0 0 chrUextra 21450156 21450197 -7554459 + R1_DM LINE R1 1 41 -5315 1 748 2905 181 11 39 chrUextra 21450300 21450966 -7553690 - SAR_DM Satellite Satellite -577 895 249 1 748 5832 24 1 1 chrUextra 21451066 21451735 -7552921 - R1_DM LINE R1 -1431 3925 3257 1 748 3970 13 41 0 chrUextra 21451837 21452302 -7552354 - IDEFIX_LTR LTR Gypsy -110 484 1 1 748 1686 5 0 15 chrUextra 21452302 21452504 -7552152 - IDEFIX_I LTR Gypsy 0 5628 5430 1 748 2655 13 3 0 chrUextra 21452612 21452912 -7551744 + R1_DM LINE R1 4766 5066 -290 1 748 1010 35 0 0 chrUextra 21452909 21453023 -7551633 + R1_DM LINE R1 5243 5356 0 1 748 1607 78 9 0 chrUextra 21453056 21453273 -7551383 + R1_DM LINE R1 1 219 -5137 1 748 1709 5 0 5 chrUextra 21453373 21453560 -7551096 + LSU-rRNA_Dme rRNA rRNA 2473 2658 -1242 1 748 4446 6 0 0 chrUextra 21453557 21454042 -7550614 + R1_DM LINE R1 4008 4492 -864 1 748 943 9 9 0 chrUextra 21454142 21454247 -7550409 + LSU-rRNA_Dme rRNA rRNA 3795 3900 0 1 748 25 0 0 0 chrUextra 21454319 21454344 -7550312 + AT_rich Low_complexity Low_complexity 1 25 0 1 748 241 163 0 58 chrUextra 21454346 21454398 -7550258 + LSU-rRNA_Dme rRNA rRNA 2570 2618 -1282 1 748 241 163 0 58 chrUextra 21454446 21454498 -7550158 + LSU-rRNA_Dme rRNA rRNA 2570 2618 -1282 1 748 25 0 0 0 chrUextra 21454517 21454542 -7550114 + AT_rich Low_complexity Low_complexity 1 25 0 1 748 233 154 258 15 chrUextra 21454544 21454610 -7550046 + LSU-rRNA_Dme rRNA rRNA 2570 2651 -1249 1 748 266 196 0 19 chrUextra 21454637 21454689 -7549967 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 748 266 196 0 19 chrUextra 21454729 21454781 -7549875 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 748 2349 116 27 27 chrUextra 21454914 21455580 -7549076 - DMSAT6 Satellite Satellite -76 666 1 1 748 5706 29 24 0 chrUextra 21455683 21456349 -7548307 - R1_DM LINE R1 -1976 3380 2699 1 748 1514 132 57 3 chrUextra 21456482 21456764 -7547892 + DNAREP1_DM LINE Penelope 1 297 -297 1 748 6034 1 6 3 chrUextra 21457218 21457887 -7546769 + LSU-rRNA_Dme rRNA rRNA 1036 1706 -2194 1 748 4739 52 1 58 chrUextra 21457987 21458656 -7546000 + BATUMI_I LTR Pao 2557 3187 -4776 1 748 2407 123 11 12 chrUextra 21458756 21459425 -7545231 + DMSAT6 Satellite Satellite 1 667 -97 1 748 945 0 0 27 chrUextra 21459527 21459639 -7545017 + NTS_DM Other Other 25 133 -107 1 748 1510 15 20 25 chrUextra 21459639 21459843 -7544813 + NTS_DM Other Other 38 240 0 1 748 1854 21 17 17 chrUextra 21459843 21460083 -7544573 + NTS_DM Other Other 1 240 0 1 748 1014 9 0 0 chrUextra 21460083 21460194 -7544462 + NTS_DM Other Other 1 111 -129 1 748 3310 167 12 8 chrUextra 21460294 21460963 -7543693 - SAR_DM Satellite Satellite -446 1026 355 1 748 1549 6 0 0 chrUextra 21461958 21462128 -7542528 - Copia2_LTR_DM LTR Copia 0 198 29 1 748 3347 13 5 0 chrUextra 21462128 21462500 -7542156 - Invader1_LTR LTR Gypsy 0 423 50 1 748 5965 22 0 0 chrUextra 21462601 21463270 -7541386 - MAX_I LTR Pao -5404 2510 1842 1 748 384 261 114 96 chrUextra 21464175 21464455 -7540201 + Invader1_LTR LTR Gypsy 84 368 -55 1 748 492 134 42 59 chrUextra 21464957 21465076 -7539580 - NTS_DM Other Other -120 120 4 1 748 1388 6 0 18 chrUextra 21465186 21465351 -7539305 - NTS_DM Other Other -78 162 1 1 748 1845 5 18 13 chrUextra 21465351 21465577 -7539079 - NTS_DM Other Other 0 240 14 1 748 1956 0 13 5 chrUextra 21466446 21466670 -7537986 - R1_DM LINE R1 -5130 226 1 1 748 260 30 30 0 chrUextra 21466670 21466703 -7537953 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2599 1 748 3903 0 0 0 chrUextra 21466698 21467115 -7537541 - LSU-rRNA_Dme rRNA rRNA -1247 2653 2237 1 748 5995 15 0 5 chrUextra 21467215 21467883 -7536773 + Gypsy4_I LTR Gypsy 633 1297 -4991 1 748 462 178 65 0 chrUextra 21468232 21468339 -7536317 + DNAREP1_DM LINE Penelope 182 295 -299 1 748 1152 44 0 0 chrUextra 21468516 21468653 -7536003 + Baggins1 LINE LOA 2099 2235 -3218 1 748 42 20 0 0 chrUextra 21468753 21468802 -7535854 + AT_rich Low_complexity Low_complexity 1 49 0 1 748 208 200 31 0 chrUextra 21469317 21469382 -7535274 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 748 3724 110 27 26 chrUextra 21470294 21470959 -7533697 - TART LINE telomeric -4690 9787 9122 1 748 6140 6 0 0 chrUextra 21471060 21471729 -7532927 + R1_DM LINE R1 4600 5268 -88 1 748 9726 226 47 43 chrUextra 21471829 21474036 -7530620 + R1_DM LINE R1 381 2595 -2761 1 748 5994 15 0 0 chrUextra 21474136 21474805 -7529851 - DMRT1B LINE R1 -3255 1928 1260 1 748 1524 12 0 0 chrUextra 21474905 21475148 -7529508 + (TATAA)n Simple_repeat Simple_repeat 1 243 0 1 748 3965 2 0 0 chrUextra 21475150 21475574 -7529082 + ROO_LTR LTR Pao 1 424 -4 1 748 679 271 35 29 chrUextra 21475691 21476006 -7528650 + XDMR Unknown Unknown 39 355 -6 1 748 632 308 50 48 chrUextra 21475717 21476341 -7528315 - SAR_DM Satellite Satellite -464 1008 384 1 748 662 14 0 0 chrUextra 21476443 21476516 -7528140 + DM297_I LTR Gypsy 6095 6167 0 1 748 3605 5 7 7 chrUextra 21476516 21476930 -7527726 + DM297_LTR LTR Gypsy 1 414 0 1 748 28 0 0 0 chrUextra 21476930 21476958 -7527698 + AT_rich Low_complexity Low_complexity 1 28 0 1 748 2889 6 0 0 chrUextra 21477212 21477529 -7527127 - STALKER4_LTR LTR Gypsy -85 317 1 1 748 2697 0 3 26 chrUextra 21477529 21477881 -7526775 - STALKER4_I LTR Gypsy 0 6530 6187 1 748 2898 185 8 8 chrUextra 21477981 21478592 -7526064 - SAR_DM Satellite Satellite -598 874 264 1 748 374 0 0 23 chrUextra 21478606 21478650 -7526006 - STALKER4_LTR LTR Gypsy 0 402 360 1 748 259 122 0 0 chrUextra 21478750 21478791 -7525865 - NTS_DM Other Other -196 44 4 1 748 1388 6 0 18 chrUextra 21478901 21479066 -7525590 - NTS_DM Other Other -78 162 1 1 748 1955 8 17 13 chrUextra 21479066 21479305 -7525351 - NTS_DM Other Other 0 240 1 1 748 814 0 35 26 chrUextra 21479305 21479419 -7525237 - NTS_DM Other Other 0 240 126 1 748 272 130 0 0 chrUextra 21479519 21479565 -7525091 - ARS406_DM Unknown Unknown -307 46 1 1 748 2389 176 61 19 chrUextra 21479524 21480177 -7524479 + SAR_DM Satellite Satellite 1 679 -203 1 748 6070 5 0 0 chrUextra 21480288 21480957 -7523699 + DM176_I LTR Gypsy 3967 4635 -1785 1 748 5590 29 1 12 chrUextra 21481057 21481726 -7522930 - NINJA_I LTR Pao -3842 2169 1508 1 748 2737 181 35 32 chrUextra 21481826 21482487 -7522169 + SAR_DM Satellite Satellite 496 1158 -314 1 748 5433 3 1 69 chrUextra 21482595 21483264 -7521392 - LSU-rRNA_Dme rRNA rRNA -1552 2348 1725 1 748 6195 5 0 0 chrUextra 21483364 21484033 -7520623 + BS2 LINE Jockey 3666 4334 -387 1 748 22 35 0 0 chrUextra 21484312 21484341 -7520315 + AT_rich Low_complexity Low_complexity 1 29 0 1 748 37 39 0 0 chrUextra 21484442 21484493 -7520163 + AT_rich Low_complexity Low_complexity 1 51 0 1 748 5816 1 0 0 chrUextra 21485671 21486340 -7518316 - DM297_I LTR Gypsy -4623 1544 876 1 748 2529 100 28 30 chrUextra 21486440 21487109 -7517547 + DMSAT6 Satellite Satellite 1 667 0 1 748 5853 19 1 3 chrUextra 21487978 21488647 -7516009 + R1_DM LINE R1 3757 4424 -932 1 748 2599 92 38 20 chrUextra 21488747 21489411 -7515245 - DMSAT6 Satellite Satellite -5 675 1 1 748 604 191 21 29 chrUextra 21489516 21489656 -7515000 + HETRP_DM Satellite Satellite 1544 1682 -190 1 748 712 186 7 14 chrUextra 21489805 21489947 -7514709 + HETRP_DM Satellite Satellite 1529 1669 -203 1 748 192 40 0 0 chrUextra 21490078 21490103 -7514553 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 748 318 238 0 24 chrUextra 21490103 21490185 -7514471 + HETRP_DM Satellite Satellite 1549 1628 -244 1 748 1914 256 36 38 chrUextra 21490294 21490952 -7513704 + ROVER-I_DM LTR Gypsy 1305 1961 -4623 1 748 3140 181 6 6 chrUextra 21491056 21491707 -7512949 - SAR_DM Satellite Satellite -641 831 181 1 748 758 123 0 0 chrUextra 21491601 21491723 -7512933 + ARS406_DM Unknown Unknown 1 122 -231 1 748 4642 79 142 14 chrUextra 21491823 21492492 -7512164 - Gypsy12_I LTR Gypsy -73 5473 4719 1 748 3034 98 183 14 chrUextra 21492592 21493111 -7511545 + TART LINE telomeric 7233 7839 -6638 1 748 717 100 36 0 chrUextra 21493114 21493224 -7511432 + TART LINE telomeric 10224 10337 -4140 1 748 230 73 73 0 chrUextra 21493220 21493261 -7511395 + TAHRE LINE telomeric 10186 10229 -234 1 748 2378 190 9 4 chrUextra 21493361 21494026 -7510630 - SAR_DM Satellite Satellite -703 667 1 1 748 5768 35 8 5 chrUextra 21494130 21494798 -7509858 - BATUMI_I LTR Pao -2032 5931 5262 1 748 1889 0 0 0 chrUextra 21494898 21495103 -7509553 - LSU-rRNA_Dme rRNA rRNA -3695 205 1 1 748 21 95 0 0 chrUextra 21495115 21495178 -7509478 + AT_rich Low_complexity Low_complexity 1 63 0 1 748 34 24 0 0 chrUextra 21495391 21495432 -7509224 + AT_rich Low_complexity Low_complexity 1 41 0 1 93 5430 39 3 2 chrUextra 21495693 21496334 -7508322 + R1_DM LINE R1 1101 1742 -3614 1 749 1599 6 0 0 chrUextra 21496441 21496621 -7508035 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 749 980 56 3 18 chrUextra 21497212 21497870 -7506786 + RSP Satellite Satellite 1 648 0 1 749 2478 209 30 15 chrUextra 21497970 21498636 -7506020 + SAR_DM Satellite Satellite 438 1113 -359 1 749 4556 2 0 0 chrUextra 21498738 21499229 -7505427 + LSU-rRNA_Dme rRNA rRNA 2087 2577 -1323 1 749 1660 0 6 0 chrUextra 21499227 21499406 -7505250 + R2_DM LINE R2 2257 2436 -1171 1 749 4065 24 2 2 chrUextra 21499507 21500000 -7504656 - ROO_I LTR Pao -219 8037 7545 1 749 523 71 29 0 chrUextra 21500000 21500070 -7504586 - ROO_I LTR Pao -712 7544 7473 1 749 778 0 0 0 chrUextra 21500081 21500174 -7504482 - ROO_I LTR Pao -1354 6902 6810 1 749 2834 188 11 15 chrUextra 21500274 21500942 -7503714 - SAR_DM Satellite Satellite -505 967 303 1 749 3278 158 19 9 chrUextra 21501044 21501710 -7502946 - SAR_DM Satellite Satellite -416 1056 384 1 749 459 36 0 0 chrUextra 21501887 21501942 -7502714 - CIRCE LINE Composite -1371 4985 4931 1 749 4614 22 2 0 chrUextra 21501942 21502478 -7502178 + R1_DM LINE R1 2277 2813 -2543 1 749 1295 275 28 35 chrUextra 21502578 21503241 -7501415 + SAR_DM Satellite Satellite 194 1126 -346 1 749 3328 165 11 8 chrUextra 21503346 21504012 -7500644 + SAR_DM Satellite Satellite 341 1008 -464 1 749 689 117 0 0 chrUextra 21504114 21504225 -7500431 - ARS406_DM Unknown Unknown -242 111 1 1 749 2523 177 39 8 chrUextra 21504132 21504782 -7499874 + SAR_DM Satellite Satellite 1 670 -677 1 749 316 191 23 0 chrUextra 21505084 21505163 -7499493 + PROTOP_A DNA P 43 124 -981 1 749 21 0 0 0 chrUextra 21505258 21505279 -7499377 + AT_rich Low_complexity Low_complexity 1 21 0 1 749 555 90 0 196 chrUextra 21505365 21505503 -7499153 - DNAREP1_DM LINE Penelope -9 585 475 1 749 3153 181 15 6 chrUextra 21505650 21506318 -7498338 - SAR_DM Satellite Satellite -543 929 256 1 749 372 49 65 16 chrUextra 21506447 21506509 -7498147 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 749 963 168 102 19 chrUextra 21506508 21506714 -7497942 - DMLTR5 LTR Gypsy 0 266 44 1 749 6060 6 0 0 chrUextra 21507186 21507854 -7496802 + Copia2_I LTR Copia 2827 3494 -668 1 749 6093 0 1 0 chrUextra 21507954 21508622 -7496034 - LSU-rRNA_Dme rRNA rRNA -527 3373 2705 1 749 3118 9 0 0 chrUextra 21508722 21509071 -7495585 - STALKER4_LTR LTR Gypsy -53 349 1 1 749 2231 26 13 22 chrUextra 21509071 21509389 -7495267 - STALKER4_I LTR Gypsy 0 6530 6216 1 749 3336 166 8 8 chrUextra 21509492 21510158 -7494498 + SAR_DM Satellite Satellite 377 1042 -430 1 749 572 0 48 36 chrUextra 21510258 21510341 -7494315 + NTS_DM Other Other 157 240 0 1 749 1355 6 0 18 chrUextra 21510341 21510506 -7494150 + NTS_DM Other Other 1 162 -78 1 749 514 119 36 0 chrUextra 21510616 21510700 -7493956 + NTS_DM Other Other 4 90 -150 1 749 5598 5 6 3 chrUextra 21511794 21512437 -7492219 + LSU-rRNA_Dme rRNA rRNA 1144 1788 -2112 1 749 5864 3 1 6 chrUextra 21512562 21513230 -7491426 - LSU-rRNA_Dme rRNA rRNA -2456 1444 780 1 749 5503 9 3 3 chrUextra 21513330 21513998 -7490658 + BLOOD_I LTR Gypsy 5802 6469 -144 1 749 1798 17 21 17 chrUextra 21514114 21514353 -7490303 - NTS_DM Other Other 0 240 1 1 749 1811 21 17 17 chrUextra 21514353 21514593 -7490063 - NTS_DM Other Other 0 240 1 1 749 1092 24 23 35 chrUextra 21514593 21514766 -7489890 - NTS_DM Other Other 0 240 70 1 749 5059 2 5 7 chrUextra 21515634 21516215 -7488441 + LSU-rRNA_Dme rRNA rRNA 1209 1788 -2112 1 749 391 0 0 0 chrUextra 21516259 21516302 -7488354 + LSU-rRNA_Dme rRNA rRNA 1788 1830 -2070 1 749 3084 181 11 9 chrUextra 21516402 21517069 -7487587 + SAR_DM Satellite Satellite 195 862 -610 1 749 2269 191 112 16 chrUextra 21517172 21517812 -7486844 + TAHRE LINE telomeric 7579 8280 -2183 1 749 411 0 0 0 chrUextra 21517938 21517983 -7486673 - NTS_DM Other Other -158 82 38 1 749 907 9 0 27 chrUextra 21517983 21518095 -7486561 - NTS_DM Other Other -107 133 25 1 749 1304 18 0 6 chrUextra 21518148 21518313 -7486343 - NTS_DM Other Other -39 201 38 1 749 907 9 0 27 chrUextra 21518313 21518425 -7486231 - NTS_DM Other Other -107 133 25 1 749 22 56 0 0 chrUextra 21518451 21518487 -7486169 + AT_rich Low_complexity Low_complexity 1 36 0 1 749 269 125 0 0 chrUextra 21518500 21518540 -7486116 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 749 4697 24 0 2 chrUextra 21518706 21519255 -7485401 + R1_DM LINE R1 2323 2870 -2486 1 749 896 34 136 0 chrUextra 21519256 21519374 -7485282 + R1_DM LINE R1 3195 3328 -2028 1 749 5938 1 0 0 chrUextra 21519474 21520120 -7484536 + BEL_I LTR Pao 4759 5404 0 1 749 3144 177 11 6 chrUextra 21520245 21520909 -7483747 - SAR_DM Satellite Satellite -569 903 237 1 749 307 252 103 0 chrUextra 21521023 21521130 -7483526 + GTWIN_LTR LTR Gypsy 288 405 -90 1 749 26 88 0 0 chrUextra 21521408 21521476 -7483180 + AT_rich Low_complexity Low_complexity 1 68 0 1 749 23 0 0 0 chrUextra 21521518 21521541 -7483115 + AT_rich Low_complexity Low_complexity 1 23 0 1 749 5552 28 14 1 chrUextra 21521778 21522446 -7482210 + R1_DM LINE R1 2932 3607 -1749 1 749 2783 181 69 11 chrUextra 21522546 21523212 -7481444 - SAR_DM Satellite Satellite -460 1012 308 1 749 687 341 23 23 chrUextra 21523506 21523947 -7480709 + Gypsy6_I LTR Gypsy 2765 3205 -3807 1 749 1597 283 32 19 chrUextra 21524851 21525421 -7479235 - ROVER-I_DM LTR Gypsy -5158 1426 850 1 749 547 53 0 0 chrUextra 21525442 21525518 -7479138 - LOOPER1_DM DNA PiggyBac -1529 352 277 1 749 5974 0 0 1 chrUextra 21525621 21526286 -7478370 + R1_DM LINE R1 2702 3365 -1991 1 749 1518 12 0 0 chrUextra 21527154 21527323 -7477333 + R1_DM LINE R1 5188 5356 0 1 749 3533 71 4 4 chrUextra 21527356 21527822 -7476834 + R1_DM LINE R1 1 466 -4890 1 749 2864 191 16 24 chrUextra 21527922 21528590 -7476066 + SAR_DM Satellite Satellite 1 662 -203 1 749 3491 22 0 0 chrUextra 21528690 21529097 -7475559 - STALKER4_I LTR Gypsy -1714 4816 4410 1 749 2293 15 19 0 chrUextra 21529094 21529358 -7475298 - STALKER4_I LTR Gypsy -2233 4297 4029 1 749 3918 7 2 4 chrUextra 21529461 21529924 -7474732 + DOC LINE Jockey 4260 4721 -4 1 749 235 0 0 0 chrUextra 21529924 21529950 -7474706 - ROO_I LTR Pao -4037 4219 4194 1 749 976 25 0 0 chrUextra 21529960 21530078 -7474578 + FW_DM LINE Jockey 1750 1867 -2825 1 749 3704 181 5 0 chrUextra 21530229 21530892 -7473764 + ROVER-I_DM LTR Gypsy 3639 4304 -2280 1 749 5666 30 0 0 chrUextra 21530994 21531662 -7472994 - R1_DM LINE R1 -2430 2926 2259 1 749 3168 176 8 12 chrUextra 21531765 21532430 -7472226 - SAR_DM Satellite Satellite -549 923 262 1 749 4671 59 73 3 chrUextra 21532530 21533198 -7471458 + I_DM LINE I 115 829 -5402 1 749 3246 178 9 6 chrUextra 21533300 21533966 -7470690 - SAR_DM Satellite Satellite -549 923 256 1 749 530 103 308 0 chrUextra 21534068 21534185 -7470471 - FB4_DM DNA Tc1 -3934 155 3 1 749 4622 43 66 14 chrUextra 21534836 21535491 -7469165 + QUASIMODO_I LTR Gypsy 4341 5029 -1031 1 749 5733 0 0 0 chrUextra 21535621 21536270 -7468386 + LSU-rRNA_Dme rRNA rRNA 243 891 -3009 1 749 1465 167 35 23 chrUextra 21537138 21537498 -7467158 + Invader4_I LTR Gypsy 849 1210 -1976 1 749 2606 34 3 0 chrUextra 21537482 21537806 -7466850 + Invader4_I LTR Gypsy 1021 1345 -1068 1 749 5823 14 0 1 chrUextra 21537907 21538574 -7466082 + DOC2_DM LINE Jockey 3911 4576 -217 1 749 3913 7 2 2 chrUextra 21538674 21539126 -7465530 - ACCORD2_I LTR Gypsy -905 6307 5856 1 749 1881 18 0 0 chrUextra 21539124 21539342 -7465314 - ACCORD2_I LTR Gypsy -769 6443 6226 1 749 794 0 11 0 chrUextra 21539442 21539535 -7465121 + NTS_DM Other Other 40 133 -107 1 749 1472 20 20 20 chrUextra 21539535 21539738 -7464918 + NTS_DM Other Other 38 240 0 1 749 1785 25 17 17 chrUextra 21539738 21539978 -7464678 + NTS_DM Other Other 1 240 0 1 749 1169 8 0 0 chrUextra 21539978 21540110 -7464546 + NTS_DM Other Other 1 132 -108 1 749 1599 19 0 0 chrUextra 21540210 21540639 -7464017 + (TCTTG)n Simple_repeat Simple_repeat 1 429 0 1 749 342 0 0 0 chrUextra 21540639 21540677 -7463979 + (CATGT)n Simple_repeat Simple_repeat 2 39 0 1 749 1500 20 0 0 chrUextra 21540677 21540878 -7463778 + (TCTTG)n Simple_repeat Simple_repeat 1 201 0 1 749 4071 2 0 0 chrUextra 21540978 21541430 -7463226 - R1_DM LINE R1 -1911 3445 2994 1 749 1971 0 0 5 chrUextra 21541428 21541646 -7463010 - LSU-rRNA_Dme rRNA rRNA -1254 2646 2430 1 749 5606 15 6 1 chrUextra 21541754 21542414 -7462242 - PROTOP DNA P 0 4480 3818 1 749 870 20 0 0 chrUextra 21542514 21542616 -7462040 - R1_DM LINE R1 -547 4809 4708 1 749 5177 2 0 0 chrUextra 21542614 21543182 -7461474 - LSU-rRNA_Dme rRNA rRNA -1249 2651 2084 1 749 5717 24 6 0 chrUextra 21543282 21543950 -7460706 - FW_DM LINE Jockey -774 3918 3247 1 749 1760 174 15 8 chrUextra 21544050 21544717 -7459939 - SAR_DM Satellite Satellite -684 672 1 1 749 316 27 0 0 chrUextra 21544818 21544855 -7459801 - DOC LINE Jockey -4685 40 4 1 749 277 106 0 21 chrUextra 21544875 21544923 -7459733 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 749 775 73 0 0 chrUextra 21545596 21545705 -7458951 + IDEFIX_I LTR Gypsy 4442 4550 -1078 1 749 3459 67 114 7 chrUextra 21545709 21546254 -7458402 + IDEFIX_I LTR Gypsy 4794 5396 -232 1 749 467 117 106 0 chrUextra 21546354 21546448 -7458208 - ARS406_DM Unknown Unknown -248 105 2 1 749 2955 182 32 6 chrUextra 21546364 21547022 -7457634 + SAR_DM Satellite Satellite 195 869 -603 1 749 363 216 0 0 chrUextra 21547122 21547233 -7457423 + (CTATT)n Simple_repeat Simple_repeat 2 112 0 1 749 2697 21 67 0 chrUextra 21547234 21547415 -7457241 + Stalker3_LTR LTR Gypsy 21 201 -171 1 749 207 0 0 0 chrUextra 21547415 21547438 -7457218 + (ATAAG)n Simple_repeat Simple_repeat 2 24 0 1 749 2697 21 67 0 chrUextra 21547438 21547586 -7457070 + Stalker3_LTR LTR Gypsy 202 370 -2 1 749 268 78 75 38 chrUextra 21547586 21547639 -7457017 + Stalker2_I LTR Gypsy 1 55 -7347 1 749 4827 16 0 0 chrUextra 21547893 21548449 -7456207 + G2_DM LINE Jockey 2547 3102 0 1 749 6004 0 1 5 chrUextra 21548658 21549326 -7455330 - SSU-rRNA_Dme rRNA rRNA -88 1907 1242 1 749 489 110 0 0 chrUextra 21549426 21549499 -7455157 + (TATG)n Simple_repeat Simple_repeat 3 75 0 1 749 2192 19 7 11 chrUextra 21549499 21549771 -7454885 + BLASTOPIA_LTR LTR Gypsy 5 275 0 1 749 2853 0 3 0 chrUextra 21549771 21550094 -7454562 + BLASTOPIA_I LTR Gypsy 1 324 -4157 1 749 5792 1 0 3 chrUextra 21550194 21550862 -7453794 + ROO_I LTR Pao 4319 4984 -3272 1 749 3147 179 9 8 chrUextra 21550967 21551630 -7453026 - SAR_DM Satellite Satellite -418 1054 391 1 749 3095 163 15 12 chrUextra 21551739 21552398 -7452258 + SAR_DM Satellite Satellite 326 986 -486 1 749 3190 63 75 0 chrUextra 21552501 21552943 -7451713 - R1-2_DM LINE R1 -2688 528 54 1 749 242 122 24 0 chrUextra 21553425 21553466 -7451190 + PROTOP DNA P 874 915 -3565 1 749 488 176 392 0 chrUextra 21553465 21553674 -7450982 + PROTOP DNA P 3959 4248 -232 1 749 1355 6 0 18 chrUextra 21554071 21554236 -7450420 - NTS_DM Other Other -78 162 1 1 749 1926 4 17 13 chrUextra 21554236 21554475 -7450181 - NTS_DM Other Other 0 240 1 1 749 1801 0 22 13 chrUextra 21554475 21554702 -7449954 - NTS_DM Other Other 0 240 12 1 749 6024 0 0 0 chrUextra 21554802 21555470 -7449186 + ACCORD2_I LTR Gypsy 2357 3024 -4188 1 749 3705 35 0 8 chrUextra 21555570 21556057 -7448599 + ROO_I LTR Pao 7774 8256 0 1 749 1546 22 0 0 chrUextra 21556057 21556238 -7448418 + ROO_LTR LTR Pao 1 181 -247 1 749 4428 2 0 0 chrUextra 21556338 21556848 -7447808 - NOMAD_LTR LTR Gypsy -8 510 1 1 749 2984 118 61 30 chrUextra 21557139 21557774 -7446882 - TART LINE telomeric -4425 10052 9398 1 749 5395 30 3 0 chrUextra 21557874 21558542 -7446114 + R1_DM LINE R1 1821 2490 -2866 1 749 5631 1 6 3 chrUextra 21558642 21559310 -7445346 - LSU-rRNA_Dme rRNA rRNA -2184 1716 1047 1 749 24 0 0 0 chrUextra 21559470 21559494 -7445162 + AT_rich Low_complexity Low_complexity 1 24 0 1 749 2066 34 4 0 chrUextra 21559807 21560074 -7444582 + IDEFIX_I LTR Gypsy 1 268 -5360 1 749 2937 171 9 9 chrUextra 21560195 21560846 -7443810 + SAR_DM Satellite Satellite 326 976 -496 1 749 3931 29 29 4 chrUextra 21561090 21561614 -7443042 - IDEFIX_LTR LTR Gypsy 0 594 58 1 749 5713 0 3 3 chrUextra 21561716 21562382 -7442274 - SSU-rRNA_Dme rRNA rRNA -511 1484 819 1 749 2974 177 9 9 chrUextra 21562482 21563149 -7441507 + SAR_DM Satellite Satellite 402 1068 -404 1 749 2914 180 14 6 chrUextra 21563250 21563914 -7440742 + SAR_DM Satellite Satellite 408 1076 -396 1 749 5798 1 0 3 chrUextra 21564018 21564686 -7439970 + SSU-rRNA_Dme rRNA rRNA 181 846 -1149 1 749 1557 84 152 0 chrUextra 21564786 21565036 -7439620 - Gypsy12_I LTR Gypsy -864 4682 4395 1 749 2294 118 4 32 chrUextra 21565020 21565454 -7439202 - Gypsy12_I LTR Gypsy -4853 693 214 1 749 2745 187 11 15 chrUextra 21565554 21566222 -7438434 + SAR_DM Satellite Satellite 205 869 -603 1 749 4613 72 1 1 chrUextra 21566322 21566989 -7437667 + BATUMI_I LTR Pao 3765 4507 -3407 1 749 2861 172 11 11 chrUextra 21567090 21567746 -7436910 + SAR_DM Satellite Satellite 421 1076 -396 1 749 5717 5 0 0 chrUextra 21567858 21568526 -7436130 + Invader2_I LTR Gypsy 611 1278 -3314 1 749 975 9 0 0 chrUextra 21568626 21568738 -7435918 + (TTGTG)n Simple_repeat Simple_repeat 4 115 0 1 749 4751 4 0 0 chrUextra 21568746 21569294 -7435362 - DMRT1B LINE R1 0 5183 4636 1 749 285 282 107 89 chrUextra 21569492 21569772 -7434884 - Invader1_LTR LTR Gypsy -55 368 84 1 749 352 177 0 25 chrUextra 21569981 21570062 -7434594 + DMLTR5 LTR Gypsy 44 122 -144 1 749 4920 45 39 0 chrUextra 21570162 21570830 -7433826 + TART LINE telomeric 2087 2780 -11697 1 749 5554 0 39 1 chrUextra 21570931 21571598 -7433058 + DOC LINE Jockey 1246 1937 -2788 1 749 5788 8 0 0 chrUextra 21571698 21572365 -7432291 - Invader1_I LTR Gypsy -1873 1313 647 1 749 5472 9 1 6 chrUextra 21572466 21573134 -7431522 + FW_DM LINE Jockey 1440 2104 -2588 1 749 5624 5 0 0 chrUextra 21573234 21573902 -7430754 - IDEFIX_I LTR Gypsy -2848 2780 2113 1 749 3119 160 9 11 chrUextra 21574002 21574670 -7429986 - SAR_DM Satellite Satellite -435 1037 371 1 749 2375 103 14 23 chrUextra 21574770 21575438 -7429218 - DMSAT6 Satellite Satellite -174 661 1 1 749 5499 21 1 0 chrUextra 21575538 21576206 -7428450 - R1_DM LINE R1 -2842 2514 1846 1 749 1712 162 38 44 chrUextra 21576306 21576974 -7427682 + TAHRE LINE telomeric 10117 10460 -3 1 749 5794 0 0 1 chrUextra 21577074 21577742 -7426914 - ROO_I LTR Pao -615 7641 6975 1 749 2667 164 28 39 chrUextra 21577842 21578510 -7426146 - SAR_DM Satellite Satellite -1083 660 1 1 749 2902 220 55 1 chrUextra 21578610 21579278 -7425378 - Gypsy6_I LTR Gypsy -2139 4873 4170 1 749 1327 59 24 42 chrUextra 21579378 21579590 -7425066 - Gypsy12_I LTR Gypsy -5338 208 1 1 749 878 192 147 34 chrUextra 21579604 21580036 -7424620 - Gypsy12_LTR LTR Gypsy -553 1727 1267 1 749 2916 174 9 11 chrUextra 21580150 21580812 -7423844 - SAR_DM Satellite Satellite -620 852 192 1 749 5451 19 16 0 chrUextra 21580914 21581582 -7423074 - R1_DM LINE R1 -3127 2229 1551 1 749 5741 0 3 3 chrUextra 21581682 21582350 -7422306 - SSU-rRNA_Dme rRNA rRNA -319 1676 1009 1 749 5650 3 0 0 chrUextra 21582450 21583118 -7421538 + DMRT1B LINE R1 359 1026 -4157 1 749 5579 6 1 0 chrUextra 21583218 21583886 -7420770 + Invader3_I LTR Gypsy 3964 4632 -256 1 749 3034 172 9 11 chrUextra 21583986 21584654 -7420002 + SAR_DM Satellite Satellite 348 1014 -458 1 749 3336 21 0 12 chrUextra 21584755 21585185 -7419471 - DM176_I LTR Gypsy -5995 425 1 1 749 1006 24 0 0 chrUextra 21585185 21585310 -7419346 - DM176_LTR LTR Gypsy 0 507 383 1 749 21 89 0 0 chrUextra 21585340 21585396 -7419260 + AT_rich Low_complexity Low_complexity 1 56 0 1 749 4453 96 3 1 chrUextra 21585524 21586190 -7418466 - S_DM DNA Tc1 -285 1451 785 1 749 3107 163 11 9 chrUextra 21586290 21586958 -7417698 + SAR_DM Satellite Satellite 376 1044 -428 1 749 3923 91 27 31 chrUextra 21587058 21587726 -7416930 + Gypsy10_I LTR Gypsy 394 1058 -4220 1 749 5765 0 1 3 chrUextra 21587826 21588494 -7416162 + SSU-rRNA_Dme rRNA rRNA 352 1018 -977 1 749 2957 172 12 9 chrUextra 21588597 21589260 -7415396 - SAR_DM Satellite Satellite -549 923 259 1 749 5850 1 0 0 chrUextra 21589362 21590030 -7414626 - SSU-rRNA_Dme rRNA rRNA -947 1048 381 1 749 2936 170 11 9 chrUextra 21590130 21590783 -7413873 + SAR_DM Satellite Satellite 284 937 -535 1 749 996 58 0 0 chrUextra 21590660 21590798 -7413858 - ARS406_DM Unknown Unknown -164 189 52 1 749 5708 3 0 0 chrUextra 21590898 21591566 -7413090 - Invader3_I LTR Gypsy -1082 3806 3139 1 749 2096 123 6 52 chrUextra 21591667 21592323 -7412333 - DMSAT6 Satellite Satellite -41 626 1 1 749 5220 18 25 1 chrUextra 21592434 21593102 -7411554 - STALKER4_I LTR Gypsy -2990 3540 2857 1 749 2835 176 6 19 chrUextra 21593202 21593869 -7410787 + SAR_DM Satellite Satellite 419 1076 -396 1 749 1252 18 0 6 chrUextra 21593989 21594154 -7410502 - NTS_DM Other Other -39 201 38 1 749 870 9 0 27 chrUextra 21594154 21594266 -7410390 - NTS_DM Other Other -107 133 25 1 749 1252 18 0 6 chrUextra 21594318 21594483 -7410173 - NTS_DM Other Other -39 201 38 1 749 843 18 0 27 chrUextra 21594483 21594595 -7410061 - NTS_DM Other Other -107 133 25 1 749 642 75 0 0 chrUextra 21594738 21594832 -7409824 + CIRCE LINE Composite 4284 4377 -1979 1 749 388 100 14 28 chrUextra 21594832 21594895 -7409761 - DMTOM1_LTR LTR Gypsy 0 410 349 1 749 543 156 40 16 chrUextra 21594895 21595019 -7409637 - DMTOM1_LTR LTR Gypsy 0 410 284 1 749 254 190 17 0 chrUextra 21595036 21595094 -7409562 - DM176_LTR LTR Gypsy -141 366 308 1 749 1006 52 24 83 chrUextra 21595238 21595406 -7409250 + CIRCE LINE Composite 4371 4528 -1828 1 749 1795 30 0 4 chrUextra 21595529 21595767 -7408889 + BATUMI_I LTR Pao 7303 7539 -424 1 749 1039 8 0 23 chrUextra 21595766 21595895 -7408761 + BATUMI_I LTR Pao 7161 7286 -677 1 749 2011 46 1 1 chrUextra 21595885 21596174 -7408482 + G_DM LINE Jockey 622 908 -1134 1 749 5614 5 1 1 chrUextra 21596274 21596942 -7407714 + R1_DM LINE R1 2639 3306 -2050 1 749 4393 33 65 10 chrUextra 21597042 21597646 -7407010 - PROTOP DNA P -3843 637 1 1 749 5763 3 0 0 chrUextra 21597810 21598478 -7406178 + DMRT1A LINE R1 2735 3402 -1781 1 749 3567 0 0 55 chrUextra 21598578 21599034 -7405622 - LSU-rRNA_Dme rRNA rRNA -3469 431 1 1 749 21 95 0 0 chrUextra 21599046 21599109 -7405547 + AT_rich Low_complexity Low_complexity 1 63 0 1 749 5530 22 0 0 chrUextra 21599346 21600014 -7404642 - R1_DM LINE R1 -1549 3807 3140 1 749 2939 187 8 5 chrUextra 21600116 21600782 -7403874 - SAR_DM Satellite Satellite -549 923 256 1 749 1644 0 0 5 chrUextra 21600882 21601075 -7403581 - ROO_LTR LTR Pao -236 192 1 1 749 4015 19 0 2 chrUextra 21601075 21601550 -7403106 + BEL_I LTR Pao 139 612 -4792 1 749 696 12 0 0 chrUextra 21601650 21601732 -7402924 - Invader4_LTR LTR Gypsy -264 82 1 1 749 4876 5 5 0 chrUextra 21601732 21602318 -7402338 - Invader4_I LTR Gypsy 0 2413 1825 1 749 734 32 0 11 chrUextra 21602418 21602513 -7402143 - NTS_DM Other Other -146 94 1 1 749 1734 21 17 17 chrUextra 21602513 21602753 -7401903 - NTS_DM Other Other 0 240 1 1 749 1726 17 17 21 chrUextra 21602753 21602994 -7401662 - NTS_DM Other Other 0 240 1 1 749 533 23 43 43 chrUextra 21602994 21603086 -7401570 - NTS_DM Other Other 0 240 149 1 749 3392 58 176 0 chrUextra 21603186 21603795 -7400861 + MDG1_I LTR Gypsy 5881 6596 0 1 749 214 191 0 0 chrUextra 21603811 21603853 -7400803 + (TTA)n Simple_repeat Simple_repeat 1 42 0 1 749 5804 0 0 0 chrUextra 21603954 21604621 -7400035 - DMRT1A LINE R1 -1445 3738 3072 1 749 416 32 0 16 chrUextra 21604722 21604786 -7399870 + NTS_DM Other Other 139 201 -39 1 749 870 9 0 27 chrUextra 21604838 21604950 -7399706 + NTS_DM Other Other 25 133 -107 1 749 1252 18 0 6 chrUextra 21604950 21605115 -7399541 + NTS_DM Other Other 38 201 -39 1 749 870 9 0 27 chrUextra 21605167 21605279 -7399377 + NTS_DM Other Other 25 133 -107 1 749 864 9 9 0 chrUextra 21605279 21605390 -7399266 + NTS_DM Other Other 38 149 -91 1 749 22 56 0 0 chrUextra 21605566 21605602 -7399054 + AT_rich Low_complexity Low_complexity 1 36 0 1 749 27 29 0 0 chrUextra 21605666 21605700 -7398956 + AT_rich Low_complexity Low_complexity 1 34 0 1 749 246 150 0 0 chrUextra 21605705 21605745 -7398911 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 749 246 150 0 0 chrUextra 21605797 21605837 -7398819 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 749 246 150 0 0 chrUextra 21605889 21605929 -7398727 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 749 255 125 0 0 chrUextra 21605972 21606012 -7398644 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 749 22 56 0 0 chrUextra 21606025 21606061 -7398595 + AT_rich Low_complexity Low_complexity 1 36 0 1 749 468 59 0 42 chrUextra 21606087 21606158 -7398498 + NTS_DM Other Other 25 92 -148 1 749 4691 100 0 0 chrUextra 21606258 21606926 -7397730 - GTWIN_I LTR Gypsy -1912 4509 3842 1 749 5450 21 3 1 chrUextra 21607026 21607694 -7396962 + DMCR1A LINE CR1 1950 2618 -1852 1 749 34 24 0 0 chrUextra 21607858 21607899 -7396757 + AT_rich Low_complexity Low_complexity 1 41 0 1 749 21 95 0 0 chrUextra 21608112 21608175 -7396481 + AT_rich Low_complexity Low_complexity 1 63 0 1 749 1994 0 0 91 chrUextra 21608187 21608462 -7396194 + LSU-rRNA_Dme rRNA rRNA 1 250 -3650 1 749 25 0 0 0 chrUextra 21609125 21609150 -7395506 + AT_rich Low_complexity Low_complexity 1 25 0 1 749 2540 264 0 0 chrUextra 21609334 21609996 -7394660 + Gypsy6_I LTR Gypsy 2403 3064 -3948 1 749 2907 184 6 8 chrUextra 21610102 21610763 -7393893 - SAR_DM Satellite Satellite -535 937 278 1 749 5937 1 0 3 chrUextra 21611630 21612297 -7392359 - R1_DM LINE R1 -3524 1832 1168 1 749 5638 6 1 1 chrUextra 21612397 21613064 -7391592 - IDEFIX_I LTR Gypsy -4561 1067 401 1 749 3170 105 16 21 chrUextra 21613164 21613689 -7390967 - DMRT1B LINE R1 -4829 354 1 1 749 5576 0 0 0 chrUextra 21613968 21614598 -7390058 + LSU-rRNA_Dme rRNA rRNA 218 847 -3053 1 749 1835 17 17 17 chrUextra 21614702 21614942 -7389714 - NTS_DM Other Other 0 240 1 1 749 1824 21 17 17 chrUextra 21614942 21615182 -7389474 - NTS_DM Other Other 0 240 1 1 749 1273 17 22 22 chrUextra 21615182 21615365 -7389291 - NTS_DM Other Other 0 240 58 1 749 3004 178 16 9 chrUextra 21615465 21616110 -7388546 - SAR_DM Satellite Satellite -629 843 195 1 749 666 114 9 9 chrUextra 21616017 21616132 -7388524 + ARS406_DM Unknown Unknown 1 115 -238 1 749 2063 181 25 6 chrUextra 21616237 21616899 -7387757 - SAR_DM Satellite Satellite -411 674 1 1 749 1929 186 16 3 chrUextra 21616999 21617632 -7387024 - SAR_DM Satellite Satellite -542 640 1 1 749 2880 184 9 21 chrUextra 21617766 21618433 -7386223 - SAR_DM Satellite Satellite -372 1100 442 1 749 5989 0 0 0 chrUextra 21618533 21619200 -7385456 - DOC LINE Jockey -3257 1468 802 1 749 41 0 0 0 chrUextra 21619300 21619341 -7385315 + AT_rich Low_complexity Low_complexity 1 41 0 1 749 245 125 46 15 chrUextra 21619853 21619918 -7384738 + (TAA)n Simple_repeat Simple_repeat 2 68 0 1 749 4979 2 0 0 chrUextra 21620067 21620643 -7384013 - I_DM LINE I -5556 675 100 1 749 765 22 0 0 chrUextra 21620643 21620734 -7383922 + (CTTAT)n Simple_repeat Simple_repeat 1 91 0 1 749 6015 1 0 0 chrUextra 21620834 21621501 -7383155 + ROO_I LTR Pao 5168 5834 -2422 1 749 3692 0 0 2 chrUextra 21621601 21622007 -7382649 - ROO_LTR LTR Pao -23 405 1 1 749 5735 12 6 0 chrUextra 21622368 21623035 -7381621 + STALKER4_I LTR Gypsy 1562 2232 -4298 1 749 1741 57 8 47 chrUextra 21623135 21623393 -7381263 - ROO_I LTR Pao -7895 361 114 1 749 3182 32 0 3 chrUextra 21623426 21623802 -7380854 - ROO_LTR LTR Pao 0 428 54 1 749 2823 10 0 0 chrUextra 21623902 21624216 -7380440 + TRANSPAC_LTR LTR Gypsy 17 330 0 1 749 3100 3 3 6 chrUextra 21624216 21624569 -7380087 + LSU-rRNA_Dme rRNA rRNA 1157 1508 -2392 1 749 2496 213 9 14 chrUextra 21624670 21625336 -7379320 - SAR_DM Satellite Satellite -396 1076 414 1 749 3005 184 8 14 chrUextra 21625436 21626103 -7378553 + SAR_DM Satellite Satellite 256 918 -554 1 749 5820 1 0 0 chrUextra 21626203 21626870 -7377786 - ROO_I LTR Pao -3034 5222 4556 1 750 5851 16 1 0 chrUextra 21626970 21627637 -7377019 + R1_DM LINE R1 4006 4673 -683 1 750 6053 1 1 0 chrUextra 21627737 21628404 -7376252 - LSU-rRNA_Dme rRNA rRNA -1436 2464 1797 1 750 3152 168 14 14 chrUextra 21628505 21629171 -7375485 + SAR_DM Satellite Satellite 195 860 -612 1 750 5544 5 0 1 chrUextra 21629271 21629938 -7374718 + DM176_I LTR Gypsy 5401 6066 -354 1 750 643 170 63 7 chrUextra 21630038 21630180 -7374476 - SAR_DM Satellite Satellite -417 1055 906 1 750 2273 174 16 16 chrUextra 21630195 21630704 -7373952 - SAR_DM Satellite Satellite -396 1076 568 1 750 6054 1 0 1 chrUextra 21630805 21631472 -7373184 + LSU-rRNA_Dme rRNA rRNA 2086 2751 -1149 1 750 1479 51 20 0 chrUextra 21631572 21631769 -7372887 - IDEFIX_LTR LTR Gypsy -393 201 1 1 750 1472 101 30 23 chrUextra 21631769 21632071 -7372585 + Invader2_I LTR Gypsy 3419 3793 -799 1 750 944 75 7 45 chrUextra 21632085 21632239 -7372417 + Invader2_I LTR Gypsy 3861 4008 -584 1 750 2225 106 0 45 chrUextra 21632397 21632773 -7371883 + Gypsy12_I LTR Gypsy 611 969 -4577 1 750 227 171 0 0 chrUextra 21632815 21632850 -7371806 + DM297_I LTR Gypsy 3424 3458 -2709 1 750 608 169 91 39 chrUextra 21632850 21633004 -7371652 + Gypsy12_LTR LTR Gypsy 1 162 -2174 1 750 2682 173 12 6 chrUextra 21633107 21633637 -7371019 - SAR_DM Satellite Satellite -587 669 26 1 750 890 60 0 0 chrUextra 21633637 21633754 -7370902 + ARS406_DM Unknown Unknown 73 189 -164 1 750 2682 173 12 6 chrUextra 21633754 21633773 -7370883 - SAR_DM Satellite Satellite -587 25 1 1 750 2545 117 12 28 chrUextra 21633891 21634539 -7370117 - DMSAT6 Satellite Satellite 0 637 1 1 750 561 0 49 37 chrUextra 21634640 21634722 -7369934 + NTS_DM Other Other 158 240 0 1 750 1811 21 17 17 chrUextra 21634722 21634962 -7369694 + NTS_DM Other Other 1 240 0 1 750 1835 17 17 17 chrUextra 21634962 21635202 -7369454 + NTS_DM Other Other 1 240 0 1 750 940 9 0 0 chrUextra 21635202 21635307 -7369349 + NTS_DM Other Other 1 105 -135 1 750 3087 182 8 8 chrUextra 21635407 21636073 -7368583 - SAR_DM Satellite Satellite -595 877 212 1 750 420 20 0 0 chrUextra 21636390 21636439 -7368217 + (TATTG)n Simple_repeat Simple_repeat 1 49 0 1 750 1152 67 0 37 chrUextra 21636441 21636628 -7368028 + (TTATA)n Simple_repeat Simple_repeat 1 180 0 1 750 5873 1 33 1 chrUextra 21636941 21637608 -7367048 + IVK_DM LINE I 4329 5016 -386 1 750 2760 182 18 10 chrUextra 21637709 21638337 -7366319 - SAR_DM Satellite Satellite -645 827 195 1 750 884 92 0 8 chrUextra 21638243 21638375 -7366281 + ARS406_DM Unknown Unknown 1 131 -222 1 750 817 21 0 0 chrUextra 21638475 21638570 -7366086 + DMRT1B LINE R1 5089 5183 0 1 750 4452 35 13 2 chrUextra 21638550 21639095 -7365561 + DOC3_DM LINE Jockey 1751 2301 -2439 1 750 418 68 17 0 chrUextra 21639083 21639142 -7365514 + DOC3_DM LINE Jockey 2522 2581 -2159 1 750 2418 219 10 15 chrUextra 21639242 21639904 -7364752 - SAR_DM Satellite Satellite -1071 658 1 1 750 1482 29 19 24 chrUextra 21640009 21640219 -7364437 + NTS_DM Other Other 32 240 0 1 750 1801 30 17 17 chrUextra 21640219 21640459 -7364197 + NTS_DM Other Other 1 240 0 1 750 1609 33 19 5 chrUextra 21640459 21640671 -7363985 + NTS_DM Other Other 1 215 -25 1 750 5737 12 1 0 chrUextra 21640776 21641443 -7363213 + STALKER4_I LTR Gypsy 5051 5718 -812 1 750 6112 3 0 0 chrUextra 21641543 21642210 -7362446 + Invader1_I LTR Gypsy 20 686 -2500 1 750 3143 29 3 0 chrUextra 21642310 21642695 -7361961 - Invader2_I LTR Gypsy -444 4148 3763 1 750 2170 39 0 0 chrUextra 21642693 21642977 -7361679 - Invader2_I LTR Gypsy -1021 3571 3288 1 750 6001 0 1 3 chrUextra 21643078 21643744 -7360912 - SSU-rRNA_Dme rRNA rRNA -610 1385 721 1 750 882 80 0 0 chrUextra 21643845 21643970 -7360686 - ARS406_DM Unknown Unknown -228 125 1 1 750 2860 175 9 11 chrUextra 21643877 21644511 -7360145 + SAR_DM Satellite Satellite 195 827 -645 1 750 5878 8 0 0 chrUextra 21644611 21645278 -7359378 + DMRT1B LINE R1 567 1233 -3950 1 750 5966 3 1 3 chrUextra 21645378 21646045 -7358611 - SSU-rRNA_Dme rRNA rRNA -728 1267 602 1 750 5538 16 5 0 chrUextra 21646145 21646812 -7357844 - ROO_I LTR Pao -4161 4095 3426 1 750 5617 19 27 1 chrUextra 21646912 21647579 -7357077 + DMRT1B LINE R1 3544 4227 -956 1 750 4155 2 2 0 chrUextra 21647679 21648140 -7356516 + LSU-rRNA_Dme rRNA rRNA 2171 2632 -1268 1 750 1789 5 10 0 chrUextra 21648140 21648346 -7356310 + R1_DM LINE R1 1 208 -5148 1 750 1029 7 0 0 chrUextra 21648446 21648586 -7356070 + DOC LINE Jockey 4586 4725 0 1 750 180 0 0 0 chrUextra 21648600 21648620 -7356036 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 1 750 4107 26 0 4 chrUextra 21648620 21649113 -7355543 + DMRT1B LINE R1 163 653 -4530 1 750 34 24 0 0 chrUextra 21649832 21649873 -7354783 + AT_rich Low_complexity Low_complexity 1 41 0 1 750 869 264 93 62 chrUextra 21649996 21650643 -7354013 + TABOR_I LTR Gypsy 2344 3528 -3369 1 750 2670 184 9 25 chrUextra 21650747 21651399 -7353257 + SAR_DM Satellite Satellite 477 1118 -354 1 750 345 151 43 65 chrUextra 21651322 21651414 -7353242 - XDMR_DM Unknown Unknown -9 351 262 1 750 1267 17 27 22 chrUextra 21651514 21651699 -7352957 + NTS_DM Other Other 55 240 0 1 750 1813 21 17 17 chrUextra 21651699 21651939 -7352717 + NTS_DM Other Other 1 240 0 1 750 1835 17 17 17 chrUextra 21651939 21652179 -7352477 + NTS_DM Other Other 1 240 0 1 750 2440 0 7 3 chrUextra 21652281 21652564 -7352092 + LSU-rRNA_Dme rRNA rRNA 1505 1788 -2112 1 750 3106 0 3 0 chrUextra 21652608 21652948 -7351708 + LSU-rRNA_Dme rRNA rRNA 1788 2128 -1772 1 750 5973 1 0 1 chrUextra 21653048 21653715 -7350941 - R1_DM LINE R1 -1786 3570 2905 1 750 5215 12 0 1 chrUextra 21653815 21654482 -7350174 - QUASIMODO_I LTR Gypsy -167 5893 5228 1 750 707 11 10 42 chrUextra 21654582 21654678 -7349978 - NTS_DM Other Other -123 117 25 1 750 21 57 0 0 chrUextra 21654704 21654739 -7349917 + AT_rich Low_complexity Low_complexity 1 35 0 1 750 1294 24 0 6 chrUextra 21654739 21654904 -7349752 - NTS_DM Other Other -39 201 38 1 750 900 9 0 27 chrUextra 21654905 21655016 -7349640 - NTS_DM Other Other -108 132 25 1 750 1304 18 0 6 chrUextra 21655068 21655233 -7349423 - NTS_DM Other Other -39 201 38 1 750 650 207 7 14 chrUextra 21655493 21655635 -7349021 + HETRP_DM Satellite Satellite 1529 1669 -203 1 750 180 0 0 0 chrUextra 21655766 21655786 -7348870 + (GA)n Simple_repeat Simple_repeat 2 21 0 1 750 552 210 8 16 chrUextra 21655786 21655912 -7348744 + HETRP_DM Satellite Satellite 1540 1664 -208 1 750 3017 157 20 17 chrUextra 21656116 21656763 -7347893 - SAR_DM Satellite Satellite -498 974 326 1 750 2963 163 33 16 chrUextra 21656884 21657550 -7347106 - SAR_DM Satellite Satellite -500 972 296 1 750 5947 3 1 0 chrUextra 21657650 21658317 -7346339 + ROO_I LTR Pao 1937 2604 -5652 1 750 6110 1 0 0 chrUextra 21658417 21659084 -7345572 + LSU-rRNA_Dme rRNA rRNA 2828 3494 -406 1 750 5316 29 0 9 chrUextra 21659184 21659851 -7344805 - IDEFIX_I LTR Gypsy -2129 3499 2839 1 750 2318 165 33 14 chrUextra 21659967 21660476 -7344180 - SAR_DM Satellite Satellite -411 1061 543 1 750 466 244 0 0 chrUextra 21660487 21660618 -7344038 - SAR_DM Satellite Satellite -396 1076 946 1 750 24 85 0 0 chrUextra 21660729 21660788 -7343868 + AT_rich Low_complexity Low_complexity 1 59 0 1 750 21 89 0 0 chrUextra 21660826 21660882 -7343774 + AT_rich Low_complexity Low_complexity 1 56 0 1 750 5805 5 1 1 chrUextra 21661485 21662152 -7342504 - FW_DM LINE Jockey -1431 3261 2595 1 750 1175 126 5 23 chrUextra 21662259 21662478 -7342178 + TAHRE LINE telomeric 10239 10453 -10 1 750 1419 131 52 86 chrUextra 21662477 21662919 -7341737 + HETA LINE telomeric 190 616 -5465 1 750 4659 45 102 0 chrUextra 21663039 21663686 -7340970 + PROTOP DNA P 1 713 -3767 1 750 5581 22 6 0 chrUextra 21663787 21664453 -7340203 - ROO_I LTR Pao -3941 4315 3646 1 750 24 0 0 0 chrUextra 21664580 21664604 -7340052 + AT_rich Low_complexity Low_complexity 1 24 0 1 750 255 105 0 0 chrUextra 21664849 21664887 -7339769 - BARI1 DNA Tc1 -1710 40 3 1 750 3003 11 33 0 chrUextra 21664855 21665217 -7339439 + IDEFIX_LTR LTR Gypsy 1 374 -220 1 750 4152 28 2 2 chrUextra 21665320 21665819 -7338837 - NINJA_I LTR Pao -1514 4497 3999 1 750 1408 43 0 31 chrUextra 21665796 21665987 -7338669 - NINJA_I LTR Pao -3164 2847 2663 1 750 2793 170 55 13 chrUextra 21666088 21666725 -7337931 - SAR_DM Satellite Satellite -614 858 195 1 750 785 107 0 0 chrUextra 21666632 21666754 -7337902 + ARS406_DM Unknown Unknown 1 122 -231 1 750 5749 19 0 0 chrUextra 21666854 21667521 -7337135 + ROO_I LTR Pao 6798 7464 -792 1 750 34 24 0 0 chrUextra 21667843 21667884 -7336772 + AT_rich Low_complexity Low_complexity 1 41 0 1 750 3021 182 6 8 chrUextra 21668413 21669055 -7335601 - SAR_DM Satellite Satellite -411 1061 421 1 750 5920 1 0 6 chrUextra 21669155 21669822 -7334834 - LSU-rRNA_Dme rRNA rRNA -1102 2798 2136 1 750 885 0 32 24 chrUextra 21669922 21670047 -7334609 + NTS_DM Other Other 115 240 0 1 750 1930 4 17 13 chrUextra 21670047 21670286 -7334370 + NTS_DM Other Other 1 240 0 1 750 1733 5 0 0 chrUextra 21670286 21670487 -7334169 + NTS_DM Other Other 1 201 -39 1 750 333 43 0 61 chrUextra 21670540 21670589 -7334067 + NTS_DM Other Other 25 70 -170 1 750 587 107 29 0 chrUextra 21670689 21670792 -7333864 - PROTOP_B DNA P -254 899 794 1 750 293 50 0 0 chrUextra 21670797 21670857 -7333799 - PROTOP_B DNA P -522 631 572 1 750 3226 47 62 30 chrUextra 21670850 21671352 -7333304 - PROTOP_B DNA P -217 936 419 1 750 1591 10 0 0 chrUextra 21671458 21671658 -7332998 + STALKER4_I LTR Gypsy 6331 6530 0 1 750 3359 46 1 14 chrUextra 21671658 21672097 -7332559 + STALKER4_LTR LTR Gypsy 1 399 -3 1 750 4742 18 22 0 chrUextra 21672226 21672780 -7331876 + R1_DM LINE R1 4789 5354 -2 1 750 519 59 0 0 chrUextra 21672815 21672883 -7331773 + R1_DM LINE R1 1 68 -5288 1 750 5209 30 62 0 chrUextra 21672990 21673657 -7330999 - R1_DM LINE R1 -1839 3517 2810 1 750 1564 6 0 0 chrUextra 21673757 21673930 -7330726 - LSU-rRNA_Dme rRNA rRNA -1088 2812 2640 1 750 4509 4 0 0 chrUextra 21673928 21674424 -7330232 - R1_DM LINE R1 0 5356 4861 1 750 379 0 0 0 chrUextra 21674524 21674565 -7330091 - NTS_DM Other Other -162 78 38 1 750 877 9 0 35 chrUextra 21674565 21674678 -7329978 - NTS_DM Other Other -107 133 25 1 750 1304 18 0 6 chrUextra 21674731 21674896 -7329760 - NTS_DM Other Other -39 201 38 1 750 907 9 0 27 chrUextra 21674896 21675008 -7329648 - NTS_DM Other Other -107 133 25 1 750 949 23 0 8 chrUextra 21675060 21675191 -7329465 - NTS_DM Other Other -39 201 72 1 750 5921 3 0 0 chrUextra 21675291 21675958 -7328698 + DM297_I LTR Gypsy 535 1201 -4966 1 750 5688 19 0 1 chrUextra 21676058 21676725 -7327931 - STALKER4_I LTR Gypsy -4071 2459 1794 1 750 3105 176 8 9 chrUextra 21676837 21677490 -7327166 - SAR_DM Satellite Satellite -396 1076 425 1 750 6052 3 0 0 chrUextra 21678359 21679026 -7325630 + DOC LINE Jockey 3224 3890 -835 1 750 241 152 0 0 chrUextra 21679126 21679172 -7325484 - ARS406_DM Unknown Unknown -307 46 1 1 750 3102 178 9 8 chrUextra 21679132 21679789 -7324867 + SAR_DM Satellite Satellite 246 903 -569 1 750 4990 32 14 5 chrUextra 21679893 21680560 -7324096 - Transib5 DNA Transib -1235 1766 1054 1 750 4723 44 139 5 chrUextra 21680660 21681327 -7323329 + R1_DM LINE R1 813 1569 -3787 1 750 2877 192 14 8 chrUextra 21681427 21682083 -7322573 + SAR_DM Satellite Satellite 278 937 -535 1 750 480 198 0 10 chrUextra 21682194 21682291 -7322365 - HETRP_DM Satellite Satellite -248 1624 1529 1 750 494 224 16 16 chrUextra 21682419 21682546 -7322110 - HETRP_DM Satellite Satellite -197 1675 1549 1 750 192 40 0 0 chrUextra 21682546 21682571 -7322085 + (TC)n Simple_repeat Simple_repeat 2 26 0 1 750 687 193 14 14 chrUextra 21682697 21682844 -7321812 - HETRP_DM Satellite Satellite -197 1675 1529 1 750 3220 173 14 8 chrUextra 21682964 21683628 -7321028 - SAR_DM Satellite Satellite -549 923 256 1 750 2190 176 9 11 chrUextra 21683728 21684395 -7320261 - SAR_DM Satellite Satellite -489 665 1 1 750 3006 183 11 9 chrUextra 21684495 21685157 -7319499 + SAR_DM Satellite Satellite 284 946 -526 1 750 5440 24 3 1 chrUextra 21685262 21685929 -7318727 - PROTOP DNA P -65 4415 3748 1 750 22 88 0 0 chrUextra 21686418 21686475 -7318181 + AT_rich Low_complexity Low_complexity 1 57 0 1 750 26 30 0 0 chrUextra 21686612 21686645 -7318011 + AT_rich Low_complexity Low_complexity 1 33 0 1 750 2716 191 20 28 chrUextra 21686798 21687460 -7317196 - SAR_DM Satellite Satellite -662 656 1 1 750 2843 179 9 21 chrUextra 21687563 21688219 -7316437 + SAR_DM Satellite Satellite 472 1119 -353 1 750 273 175 32 0 chrUextra 21688165 21688228 -7316428 - XDMR Unknown Unknown 0 361 297 1 750 538 183 130 0 chrUextra 21688330 21688461 -7316195 - Stalker2_I LTR Gypsy -7013 389 242 1 750 306 105 0 50 chrUextra 21688629 21688689 -7315967 - Stalker2_I LTR Gypsy -7345 57 1 1 750 345 25 0 0 chrUextra 21688689 21688716 -7315940 - STALKER4_I LTR Gypsy -6503 27 1 1 750 2495 11 0 4 chrUextra 21688716 21688997 -7315659 - STALKER4_LTR LTR Gypsy 0 402 123 1 750 514 119 36 0 chrUextra 21689379 21689463 -7315193 - NTS_DM Other Other -150 90 4 1 750 1281 6 12 18 chrUextra 21689573 21689736 -7314920 - NTS_DM Other Other -78 162 1 1 750 3280 166 14 12 chrUextra 21689864 21690528 -7314128 + SAR_DM Satellite Satellite 373 1037 -435 1 750 5994 1 0 1 chrUextra 21690631 21691298 -7313358 - R1_DM LINE R1 -2989 2367 1702 1 750 5793 15 0 1 chrUextra 21691400 21692065 -7312591 - Gypsy4_I LTR Gypsy -1643 4645 3982 1 750 1224 77 0 0 chrUextra 21692165 21692464 -7312192 + (GAGAA)n Simple_repeat Simple_repeat 1 299 0 1 750 998 96 0 11 chrUextra 21692465 21692629 -7312027 + (AGATG)n Simple_repeat Simple_repeat 3 165 0 1 750 1173 78 0 0 chrUextra 21692629 21692808 -7311848 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 750 998 96 0 11 chrUextra 21692808 21692823 -7311833 + (AGATG)n Simple_repeat Simple_repeat 3 17 0 1 750 570 203 15 15 chrUextra 21692932 21693062 -7311594 + HETRP_DM Satellite Satellite 1546 1675 -197 1 750 715 179 14 14 chrUextra 21693199 21693346 -7311310 + HETRP_DM Satellite Satellite 1529 1675 -197 1 750 489 196 0 61 chrUextra 21693485 21693599 -7311057 + HETRP_DM Satellite Satellite 1518 1624 -248 1 750 5482 12 1 1 chrUextra 21693699 21694366 -7310290 + QUASIMODO_I LTR Gypsy 4698 5364 -696 1 750 21 89 0 0 chrUextra 21694783 21694839 -7309817 + AT_rich Low_complexity Low_complexity 1 56 0 1 750 2479 4 4 0 chrUextra 21694858 21695133 -7309523 - SSU-rRNA_Dme rRNA rRNA 0 1995 1720 1 750 4562 52 33 12 chrUextra 21695237 21695895 -7308761 + TART LINE telomeric 2443 3114 -11363 1 750 1800 5 0 0 chrUextra 21696002 21696204 -7308452 - LSU-rRNA_Dme rRNA rRNA -3698 202 1 1 750 21 95 0 0 chrUextra 21696216 21696279 -7308377 + AT_rich Low_complexity Low_complexity 1 63 0 1 750 34 24 0 0 chrUextra 21696492 21696533 -7308123 + AT_rich Low_complexity Low_complexity 1 41 0 1 750 2613 137 159 31 chrUextra 21696767 21697431 -7307225 + TART LINE telomeric 4813 5387 -694 1 750 391 52 0 17 chrUextra 21697534 21697593 -7307063 + NTS_DM Other Other 144 201 -39 1 750 21 57 0 0 chrUextra 21697593 21697628 -7307028 + AT_rich Low_complexity Low_complexity 1 35 0 1 750 870 9 9 27 chrUextra 21697654 21697765 -7306891 + NTS_DM Other Other 25 133 -107 1 750 851 0 0 0 chrUextra 21697765 21697861 -7306795 + NTS_DM Other Other 38 133 -107 1 750 1450 25 20 20 chrUextra 21697861 21698064 -7306592 + NTS_DM Other Other 38 240 0 1 750 1138 22 0 0 chrUextra 21698064 21698198 -7306458 + NTS_DM Other Other 1 134 -106 1 750 1219 175 89 24 chrUextra 21698301 21698594 -7306062 - Gypsy12_LTR LTR Gypsy -867 1469 1158 1 750 578 261 53 89 chrUextra 21698605 21698966 -7305690 - Gypsy12_LTR LTR Gypsy -1257 1079 732 1 750 5415 43 0 0 chrUextra 21699068 21699735 -7304921 + DMRT1B LINE R1 4094 4760 -423 1 750 1015 328 10 11 chrUextra 21699836 21700463 -7304193 - TABOR_I LTR Gypsy -3367 2969 2344 1 750 1620 9 30 0 chrUextra 21700645 21700977 -7303679 + (TTCTC)n Simple_repeat Simple_repeat 1 341 0 1 750 665 138 41 16 chrUextra 21701024 21701268 -7303388 + GA-rich Low_complexity Low_complexity 1 250 0 1 750 5962 0 3 5 chrUextra 21701369 21702036 -7302620 + SSU-rRNA_Dme rRNA rRNA 1162 1827 -168 1 750 5101 39 15 29 chrUextra 21702136 21702802 -7301854 - R1_DM LINE R1 -4040 1316 660 1 750 234 167 21 0 chrUextra 21702964 21703012 -7301644 - NTS_DM Other Other -191 49 1 1 750 1088 138 35 22 chrUextra 21703012 21703242 -7301414 - NTS_DM Other Other 0 240 8 1 750 291 125 21 0 chrUextra 21703340 21703388 -7301268 - NTS_DM Other Other -191 49 1 1 750 727 130 20 7 chrUextra 21703423 21703570 -7301086 - NTS_DM Other Other -39 201 53 1 750 600 142 0 0 chrUextra 21703670 21703776 -7300880 - ARS406_DM Unknown Unknown -247 106 1 1 750 2991 183 11 8 chrUextra 21703683 21704337 -7300319 + SAR_DM Satellite Satellite 195 850 -622 1 750 3324 131 5 27 chrUextra 21704439 21705003 -7299653 + Gypsy12_LTR LTR Gypsy 1785 2336 0 1 750 780 20 40 0 chrUextra 21705003 21705102 -7299554 + Gypsy12_I LTR Gypsy 1 103 -5443 1 750 2952 9 0 0 chrUextra 21705204 21705533 -7299123 + LSU-rRNA_Dme rRNA rRNA 2322 2650 -1250 1 750 3122 3 0 0 chrUextra 21705522 21705871 -7298785 + R1_DM LINE R1 3907 4255 -1101 1 750 302 0 0 0 chrUextra 21705971 21706015 -7298641 + Copia_LTR LTR Copia 233 276 0 1 750 1707 18 13 22 chrUextra 21706015 21706241 -7298415 - NTS_DM Other Other -16 224 1 1 750 1835 17 17 17 chrUextra 21706241 21706481 -7298175 - NTS_DM Other Other 0 240 1 1 750 991 33 25 25 chrUextra 21706481 21706638 -7298018 - NTS_DM Other Other 0 240 84 1 750 4903 23 0 69 chrUextra 21706738 21707405 -7297251 - NINJA_I LTR Pao -5212 799 179 1 750 2659 72 29 30 chrUextra 21707507 21708172 -7296484 + DMSAT6 Satellite Satellite 1 664 -285 1 750 5433 0 2 3 chrUextra 21708338 21708939 -7295717 - LSU-rRNA_Dme rRNA rRNA 0 3900 3301 1 750 5709 21 16 0 chrUextra 21709040 21709706 -7294950 - Gypsy2_I LTR Gypsy -2882 3253 2577 1 750 5417 0 2 5 chrUextra 21709872 21710473 -7294183 - LSU-rRNA_Dme rRNA rRNA 0 3900 3302 1 750 1042 58 0 0 chrUextra 21710573 21710711 -7293945 + ARS406_DM Unknown Unknown 52 189 -164 1 750 2730 157 29 7 chrUextra 21710588 21711139 -7293517 - SAR_DM Satellite Satellite -535 937 375 1 750 755 96 0 0 chrUextra 21711125 21711240 -7293416 + ARS406_DM Unknown Unknown 31 145 -208 1 750 5802 6 0 0 chrUextra 21711340 21711989 -7292667 + STALKER4_I LTR Gypsy 4144 4792 -1738 1 750 5776 11 1 1 chrUextra 21712108 21712774 -7291882 - R1_DM LINE R1 -1291 4065 3400 1 750 5434 0 0 40 chrUextra 21712874 21713541 -7291115 + LSU-rRNA_Dme rRNA rRNA 56 695 -3205 1 750 4956 30 3 40 chrUextra 21713641 21714308 -7290348 - DOC2_DM LINE Jockey -3396 1397 756 1 750 23 0 0 0 chrUextra 21714436 21714459 -7290197 + AT_rich Low_complexity Low_complexity 1 23 0 1 750 5494 0 1 38 chrUextra 21715175 21715842 -7288814 + LSU-rRNA_Dme rRNA rRNA 157 799 -3101 1 750 4248 0 0 50 chrUextra 21715942 21716461 -7288195 - LSU-rRNA_Dme rRNA rRNA -3407 493 1 1 750 21 95 0 0 chrUextra 21716473 21716536 -7288120 + AT_rich Low_complexity Low_complexity 1 63 0 1 750 1119 16 0 0 chrUextra 21716709 21716837 -7287819 - R1_DM LINE R1 -190 5166 5039 1 750 4884 2 0 0 chrUextra 21716839 21717376 -7287280 - LSU-rRNA_Dme rRNA rRNA -1251 2649 2113 1 750 829 11 0 0 chrUextra 21717478 21717570 -7287086 + R1_DM LINE R1 5265 5356 0 1 750 5215 2 0 2 chrUextra 21717568 21718143 -7286513 + LSU-rRNA_Dme rRNA rRNA 2640 3213 -687 1 750 3389 142 42 19 chrUextra 21718244 21718910 -7285746 + TART LINE telomeric 8924 9604 -4873 1 750 2901 172 46 12 chrUextra 21719022 21719677 -7284979 + SAR_DM Satellite Satellite 326 1002 -470 1 750 264 309 23 23 chrUextra 21719784 21719913 -7284743 - Invader3_I LTR Gypsy -1467 3421 3263 1 750 346 314 7 7 chrUextra 21720199 21720340 -7284316 - Invader3_I LTR Gypsy -1859 3029 2889 1 750 1547 0 0 0 chrUextra 21721043 21721211 -7283445 - SSU-rRNA_Dme rRNA rRNA 0 1995 1828 1 750 4806 4 0 0 chrUextra 21721311 21721840 -7282816 + LSU-rRNA_Dme rRNA rRNA 2053 2581 -1319 1 750 1292 7 0 0 chrUextra 21721836 21721978 -7282678 + R2_DM LINE R2 1975 2116 -1491 1 750 965 9 0 0 chrUextra 21722078 21722188 -7282468 - LSU-rRNA_Dme rRNA rRNA -3790 110 1 1 750 21 95 0 0 chrUextra 21722200 21722263 -7282393 + AT_rich Low_complexity Low_complexity 1 63 0 1 750 34 24 0 0 chrUextra 21722476 21722517 -7282139 + AT_rich Low_complexity Low_complexity 1 41 0 1 750 1167 7 0 0 chrUextra 21722865 21723000 -7281656 - 5S_DM RNA RNA 0 135 1 1 750 1176 0 0 0 chrUextra 21723224 21723359 -7281297 - 5S_DM RNA RNA 0 135 1 1 750 2384 100 31 6 chrUextra 21724403 21725046 -7279610 - DMSAT6 Satellite Satellite 0 659 1 1 750 349 0 68 51 chrUextra 21725146 21725205 -7279451 + NTS_DM Other Other 181 240 0 1 750 1734 21 17 17 chrUextra 21725205 21725445 -7279211 + NTS_DM Other Other 1 240 0 1 750 1803 8 17 17 chrUextra 21725445 21725685 -7278971 + NTS_DM Other Other 1 240 0 1 750 1038 16 8 0 chrUextra 21725685 21725813 -7278843 + NTS_DM Other Other 1 129 -111 1 750 4664 0 24 0 chrUextra 21725913 21726466 -7278190 - G2_DM LINE Jockey -568 2534 1969 1 750 876 17 0 0 chrUextra 21726465 21726580 -7278076 + FW_DM LINE Jockey 2840 2954 -1738 1 750 5433 19 0 1 chrUextra 21726680 21727347 -7277309 - G2_DM LINE Jockey -418 2684 2019 1 750 307 24 24 0 chrUextra 21728214 21728255 -7276401 + ARS406_DM Unknown Unknown 148 189 -164 1 750 2907 169 11 11 chrUextra 21728223 21728876 -7275780 - SAR_DM Satellite Satellite -625 847 195 1 750 2772 165 33 15 chrUextra 21729751 21730409 -7274247 + SAR_DM Satellite Satellite 407 1076 -396 1 750 5467 21 0 0 chrUextra 21730527 21731182 -7273474 + R1_DM LINE R1 3150 3804 -1552 1 750 5398 25 0 0 chrUextra 21731282 21731949 -7272707 - ROO_I LTR Pao -6369 1887 1221 1 750 5038 2 0 0 chrUextra 21732049 21732622 -7272034 - SSU-rRNA_Dme rRNA rRNA -1422 573 1 1 750 3022 164 8 21 chrUextra 21732816 21733483 -7271173 - SAR_DM Satellite Satellite -439 1033 376 1 750 1716 15 0 0 chrUextra 21733583 21733783 -7270873 + R1_DM LINE R1 5157 5356 0 1 750 3209 58 5 5 chrUextra 21733818 21734250 -7270406 + R1_DM LINE R1 2 433 -4923 1 750 2596 181 14 29 chrUextra 21734350 21735017 -7269639 - SAR_DM Satellite Satellite -359 1113 457 1 750 656 124 0 8 chrUextra 21735117 21735239 -7269417 - ARS406_DM Unknown Unknown -232 121 1 1 750 2568 179 17 25 chrUextra 21735145 21735783 -7268873 + SAR_DM Satellite Satellite 195 827 -645 1 750 1250 131 0 0 chrUextra 21736651 21736842 -7267814 + Gypsy12_I LTR Gypsy 1627 1817 -3729 1 750 3154 84 55 17 chrUextra 21736844 21737317 -7267339 + Gypsy12_I LTR Gypsy 4466 4956 -590 1 750 447 250 22 43 chrUextra 21737422 21737606 -7267050 + Gypsy12_LTR LTR Gypsy 899 1078 -1258 1 750 1303 182 165 19 chrUextra 21737618 21738048 -7266608 + Gypsy12_LTR LTR Gypsy 1158 1650 -686 1 750 4966 2 5 7 chrUextra 21738185 21738781 -7265875 + LSU-rRNA_Dme rRNA rRNA 1194 1788 -2112 1 750 2641 189 16 17 chrUextra 21740486 21741153 -7263503 - SAR_DM Satellite Satellite -1084 666 1 1 750 309 353 22 22 chrUextra 21741253 21741476 -7263180 - Gypsy12_I LTR Gypsy -2265 3281 3059 1 750 2261 62 0 75 chrUextra 21741388 21741734 -7262922 - CIRCE LINE Composite -5064 1292 973 1 750 381 0 0 0 chrUextra 21741876 21741920 -7262736 - CIRCE LINE Composite -5386 970 927 1 750 2514 89 12 20 chrUextra 21742020 21742663 -7261993 - DMSAT6 Satellite Satellite -39 638 1 1 750 816 11 0 0 chrUextra 21742787 21742880 -7261776 + (TTGTG)n Simple_repeat Simple_repeat 3 95 0 1 750 5505 22 1 0 chrUextra 21743554 21744221 -7260435 - R1_DM LINE R1 -2761 2595 1928 1 750 5337 2 2 0 chrUextra 21744321 21744934 -7259722 - LSU-rRNA_Dme rRNA rRNA -647 3253 2640 1 750 430 0 0 18 chrUextra 21744932 21744987 -7259669 - R1_DM LINE R1 0 5356 5303 1 750 3613 37 2 0 chrUextra 21745087 21745548 -7259108 + G2_DM LINE Jockey 2628 3089 -13 1 750 1546 54 0 0 chrUextra 21745548 21745753 -7258903 - G2_DM LINE Jockey -574 2528 2324 1 750 5660 9 0 0 chrUextra 21745853 21746519 -7258137 + Invader6_I LTR Gypsy 3252 3917 -182 1 750 3001 173 6 8 chrUextra 21746631 21747284 -7257372 - SAR_DM Satellite Satellite -396 1076 425 1 750 5102 2 3 0 chrUextra 21747385 21747977 -7256679 - LSU-rRNA_Dme rRNA rRNA -1519 2381 1788 1 750 279 125 236 0 chrUextra 21748217 21748361 -7256295 + (CTAAA)n Simple_repeat Simple_repeat 1 178 0 1 750 279 125 236 0 chrUextra 21748376 21748793 -7255863 + (CTAAA)n Simple_repeat Simple_repeat 1 515 0 1 750 5403 29 0 0 chrUextra 21749683 21750349 -7254307 - R1_DM LINE R1 -2273 3083 2418 1 750 4829 79 0 12 chrUextra 21750450 21751115 -7253541 - Gypsy12_I LTR Gypsy -248 5298 4642 1 750 5362 24 42 1 chrUextra 21751215 21751881 -7252775 - R1_DM LINE R1 -612 4744 4052 1 750 1686 310 8 14 chrUextra 21751984 21752644 -7252012 - MICROPIA_I LTR Gypsy -989 3487 2832 1 750 5103 0 96 1 chrUextra 21752747 21753413 -7251243 + ROO_I LTR Pao 474 1202 -7054 1 750 21 0 0 0 chrUextra 21753735 21753756 -7250900 + AT_rich Low_complexity Low_complexity 1 21 0 1 750 3406 0 0 3 chrUextra 21753788 21754179 -7250477 + ROO_LTR LTR Pao 1 390 -38 1 750 3457 66 52 26 chrUextra 21754279 21754945 -7249711 + PROTOP_A DNA P 508 1136 -17 1 750 378 195 104 0 chrUextra 21755046 21755265 -7249391 + (CTTAT)n Simple_repeat Simple_repeat 1 241 0 1 750 378 211 106 0 chrUextra 21755158 21755367 -7249289 + (TCTTG)n Simple_repeat Simple_repeat 1 231 0 1 750 322 226 101 0 chrUextra 21755300 21755459 -7249197 + (CTTAT)n Simple_repeat Simple_repeat 3 177 0 1 750 358 201 107 0 chrUextra 21755532 21755691 -7248965 + (CTATT)n Simple_repeat Simple_repeat 5 180 0 1 750 282 244 92 18 chrUextra 21756620 21756783 -7247873 + (TTCTG)n Simple_repeat Simple_repeat 5 179 0 1 750 284 195 76 41 chrUextra 21756824 21756995 -7247661 + (TCTG)n Simple_repeat Simple_repeat 2 178 0 1 750 291 185 75 69 chrUextra 21756931 21757105 -7247551 + (TCTTG)n Simple_repeat Simple_repeat 3 177 0 1 93 2920 176 9 11 chrUextra 21757344 21758006 -7246650 - SAR_DM Satellite Satellite -561 911 251 1 751 1729 4 17 17 chrUextra 21758109 21758339 -7246317 - NTS_DM Other Other -10 230 1 1 751 1861 0 17 13 chrUextra 21758339 21758578 -7246078 - NTS_DM Other Other 0 240 1 1 751 1413 10 25 15 chrUextra 21758578 21758775 -7245881 - NTS_DM Other Other 0 240 42 1 751 4686 4 0 0 chrUextra 21758993 21759541 -7245115 + QUASIMODO_LTR LTR Gypsy 1 548 -110 1 751 692 226 29 41 chrUextra 21759641 21759886 -7244770 + Gypsy12_LTR LTR Gypsy 1014 1255 -1081 1 751 986 235 85 24 chrUextra 21759896 21760306 -7244350 + Gypsy12_LTR LTR Gypsy 1456 1890 -446 1 751 4741 41 40 22 chrUextra 21760426 21761073 -7243583 - DMCR1A LINE CR1 -1668 2802 2144 1 751 870 9 0 27 chrUextra 21761212 21761324 -7243332 + NTS_DM Other Other 25 133 -107 1 751 1232 24 0 6 chrUextra 21761324 21761489 -7243167 + NTS_DM Other Other 38 201 -39 1 751 848 18 0 27 chrUextra 21761541 21761653 -7243003 + NTS_DM Other Other 25 133 -107 1 751 1234 24 0 6 chrUextra 21761653 21761818 -7242838 + NTS_DM Other Other 38 201 -39 1 751 2317 53 0 75 chrUextra 21762107 21762453 -7242203 + CIRCE LINE Composite 973 1292 -5064 1 751 318 345 24 24 chrUextra 21762394 21762519 -7242137 + Gypsy12_I LTR Gypsy 3088 3298 -2248 1 751 448 29 0 186 chrUextra 21762519 21762605 -7242051 + CIRCE LINE Composite 1305 1374 -4982 1 751 2923 153 12 38 chrUextra 21762706 21763358 -7241298 - SAR_DM Satellite Satellite -485 987 353 1 751 4227 107 5 3 chrUextra 21763471 21764135 -7240521 + S_DM DNA Tc1 893 1557 -179 1 751 5320 22 48 0 chrUextra 21764237 21764903 -7239753 + R1_DM LINE R1 1658 2355 -3001 1 751 1561 14 23 18 chrUextra 21765003 21765224 -7239432 + NTS_DM Other Other 19 240 0 1 751 1734 21 17 17 chrUextra 21765224 21765464 -7239192 + NTS_DM Other Other 1 240 0 1 751 1662 5 0 5 chrUextra 21765464 21765669 -7238987 + NTS_DM Other Other 1 204 -36 1 751 1350 111 9 22 chrUextra 21765772 21766003 -7238653 + Gypsy9_I LTR Gypsy 1672 1899 -2778 1 751 1816 34 0 4 chrUextra 21766201 21766435 -7238221 - CIRCE LINE Composite -1376 4980 4748 1 751 2770 179 23 12 chrUextra 21766536 21767196 -7237460 + SAR_DM Satellite Satellite 237 903 -569 1 751 5517 12 1 0 chrUextra 21767303 21767967 -7236689 + R1_DM LINE R1 178 842 -4514 1 751 5672 0 3 1 chrUextra 21768067 21768733 -7235923 + R1_DM LINE R1 1081 1747 -3609 1 751 3116 21 21 0 chrUextra 21768833 21769214 -7235442 - R1_DM LINE R1 -2691 2665 2277 1 751 436 0 0 0 chrUextra 21769214 21769264 -7235392 + CIRCE LINE Composite 4931 4980 -1376 1 751 1632 13 22 18 chrUextra 21769599 21769827 -7234829 + NTS_DM Other Other 12 240 0 1 751 1734 21 17 17 chrUextra 21769827 21770067 -7234589 + NTS_DM Other Other 1 240 0 1 751 1543 20 0 5 chrUextra 21770067 21770265 -7234391 + NTS_DM Other Other 1 197 -43 1 751 5689 0 0 0 chrUextra 21770365 21771031 -7233625 - FW_DM LINE Jockey -1439 3253 2588 1 751 5112 1 8 9 chrUextra 21771131 21771797 -7232859 + Stalker2_I LTR Gypsy 567 1231 -6171 1 751 3488 12 0 0 chrUextra 21771897 21772305 -7232351 + QUASIMODO_LTR LTR Gypsy 251 658 0 1 751 2047 35 0 0 chrUextra 21772305 21772563 -7232093 + QUASIMODO_I LTR Gypsy 1 258 -5802 1 751 388 100 0 0 chrUextra 21772664 21772724 -7231932 + G2_DM LINE Jockey 2469 2528 -574 1 751 982 44 0 0 chrUextra 21772746 21772883 -7231773 - G2_DM LINE Jockey -32 3070 2934 1 751 3227 64 29 0 chrUextra 21772879 21773329 -7231327 + G2_DM LINE Jockey 2527 2989 -113 1 751 2827 178 18 9 chrUextra 21773430 21774095 -7230561 + SAR_DM Satellite Satellite 246 916 -556 1 751 37 39 0 0 chrUextra 21774197 21774248 -7230408 + AT_rich Low_complexity Low_complexity 1 51 0 1 751 28 48 0 0 chrUextra 21774602 21774644 -7230012 + AT_rich Low_complexity Low_complexity 1 42 0 1 751 5572 11 1 3 chrUextra 21774961 21775627 -7229029 + R1_DM LINE R1 2000 2664 -2692 1 751 3510 35 0 0 chrUextra 21775727 21776156 -7228500 + R1_DM LINE R1 1400 1828 -3528 1 751 1892 50 0 0 chrUextra 21776154 21776393 -7228263 + R1_DM LINE R1 1317 1555 -3801 1 751 1202 26 0 0 chrUextra 21776493 21776644 -7228012 - NTS_DM Other Other -89 151 1 1 751 1734 21 17 17 chrUextra 21776644 21776884 -7227772 - NTS_DM Other Other 0 240 1 1 751 1397 20 20 20 chrUextra 21776885 21777087 -7227569 - NTS_DM Other Other -1 239 38 1 751 550 14 0 0 chrUextra 21777087 21777159 -7227497 - NTS_DM Other Other -107 133 62 1 751 2790 182 9 6 chrUextra 21777265 21777905 -7226751 - SAR_DM Satellite Satellite -636 836 195 1 751 651 124 0 0 chrUextra 21777812 21777925 -7226731 + ARS406_DM Unknown Unknown 1 113 -240 1 751 1206 17 27 22 chrUextra 21778025 21778209 -7226447 + NTS_DM Other Other 56 240 0 1 751 1774 13 17 17 chrUextra 21778209 21778449 -7226207 + NTS_DM Other Other 1 240 0 1 751 1858 8 12 12 chrUextra 21778449 21778689 -7225967 + NTS_DM Other Other 1 240 0 1 751 3073 36 146 1 chrUextra 21778791 21779457 -7225199 - R1_DM LINE R1 -3691 1665 904 1 751 5400 31 0 0 chrUextra 21779557 21780223 -7224433 - R1_DM LINE R1 -3338 2018 1353 1 751 1364 180 8 0 chrUextra 21780323 21780590 -7224066 - Gypsy2_I LTR Gypsy -780 5355 5087 1 751 240 353 0 0 chrUextra 21780742 21780844 -7223812 - G2_DM LINE Jockey -2720 382 281 1 751 2776 188 8 12 chrUextra 21781089 21781745 -7222911 + SAR_DM Satellite Satellite 249 901 -571 1 751 736 41 0 10 chrUextra 21781656 21781755 -7222901 - ARS406_DM Unknown Unknown -164 189 92 1 751 2889 175 9 8 chrUextra 21781875 21782521 -7222135 - SAR_DM Satellite Satellite -396 1076 430 1 751 2904 177 8 8 chrUextra 21782621 21783286 -7221370 + SAR_DM Satellite Satellite 198 862 -610 1 751 2928 170 18 9 chrUextra 21783389 21784053 -7220603 + SAR_DM Satellite Satellite 332 1001 -471 1 751 5706 3 1 0 chrUextra 21784153 21784819 -7219837 + DOC LINE Jockey 3929 4595 -130 1 751 5179 39 3 1 chrUextra 21784919 21785584 -7219072 + G2_DM LINE Jockey 1829 2494 -608 1 751 774 31 0 0 chrUextra 21785685 21785781 -7218875 - R1_DM LINE R1 -3884 1472 1377 1 751 4337 39 50 0 chrUextra 21785789 21786351 -7218305 + FW_DM LINE Jockey 1 590 -4102 1 751 5755 0 0 0 chrUextra 21786451 21787117 -7217539 + DOC LINE Jockey 1313 1978 -2747 1 751 5753 3 0 0 chrUextra 21787217 21787883 -7216773 + DMRT1B LINE R1 1568 2233 -2950 1 751 5611 5 6 1 chrUextra 21787983 21788649 -7216007 - R2_DM LINE R2 -2523 1084 416 1 751 2659 163 25 57 chrUextra 21788752 21789409 -7215247 - SAR_DM Satellite Satellite -1086 636 1 1 751 5799 1 3 0 chrUextra 21789515 21790181 -7214475 + SSU-rRNA_Dme rRNA rRNA 137 804 -1191 1 751 361 0 0 0 chrUextra 21790281 21790325 -7214331 + MDG1_I LTR Gypsy 6553 6596 0 1 751 3524 20 2 0 chrUextra 21790325 21790766 -7213890 + MDG1_LTR LTR Gypsy 1 442 0 1 751 1374 34 0 28 chrUextra 21790766 21790947 -7213709 + MAX_I LTR Pao 3691 3866 -4048 1 751 3114 167 8 8 chrUextra 21791048 21791711 -7212945 - SAR_DM Satellite Satellite -478 994 332 1 751 1850 4 17 13 chrUextra 21791835 21792074 -7212582 - NTS_DM Other Other 0 240 1 1 751 1678 34 17 17 chrUextra 21792074 21792314 -7212342 - NTS_DM Other Other 0 240 1 1 751 1064 19 24 24 chrUextra 21792314 21792479 -7212177 - NTS_DM Other Other 0 240 76 1 751 2975 167 30 12 chrUextra 21792579 21793239 -7211417 + SAR_DM Satellite Satellite 387 1058 -414 1 751 3655 167 39 0 chrUextra 21793345 21794011 -7210645 - GTWIN_I LTR Gypsy -3921 2500 1809 1 751 774 11 0 0 chrUextra 21794111 21794201 -7210455 - NTS_DM Other Other -150 90 1 1 751 1734 21 17 17 chrUextra 21794201 21794441 -7210215 - NTS_DM Other Other 0 240 1 1 751 1408 20 20 20 chrUextra 21794441 21794644 -7210012 - NTS_DM Other Other 0 240 38 1 751 795 10 0 0 chrUextra 21794644 21794740 -7209916 - NTS_DM Other Other -107 133 38 1 751 243 27 0 0 chrUextra 21794740 21794777 -7209879 - NTS_DM Other Other -107 133 97 1 751 5481 29 0 0 chrUextra 21794877 21795543 -7209113 + R1_DM LINE R1 1488 2153 -3203 1 751 1457 268 68 18 chrUextra 21795643 21796273 -7208383 + G6_DM LINE Jockey 275 936 -1106 1 751 1004 169 97 30 chrUextra 21797185 21797454 -7207202 - Gypsy12_LTR LTR Gypsy -892 1444 1158 1 751 284 262 94 41 chrUextra 21797466 21797637 -7207019 - Gypsy12_LTR LTR Gypsy -1258 1078 899 1 751 1820 200 40 15 chrUextra 21797941 21798607 -7206049 + SAR_DM Satellite Satellite 1 682 -216 1 751 2713 61 6 150 chrUextra 21798707 21799366 -7205290 - BATUMI_I LTR Pao -6863 1100 537 1 751 769 21 0 0 chrUextra 21799473 21799567 -7205089 + NTS_DM Other Other 40 133 -107 1 751 1344 35 20 20 chrUextra 21799567 21799770 -7204886 + NTS_DM Other Other 38 240 0 1 751 1738 21 17 17 chrUextra 21799770 21800010 -7204646 + NTS_DM Other Other 1 240 0 1 751 1099 8 0 0 chrUextra 21800010 21800139 -7204517 + NTS_DM Other Other 1 129 -111 1 751 2979 165 15 16 chrUextra 21800239 21800905 -7203751 - SAR_DM Satellite Satellite -472 1000 336 1 751 3078 163 11 8 chrUextra 21801008 21801671 -7202985 + SAR_DM Satellite Satellite 369 1033 -439 1 751 2528 172 19 34 chrUextra 21801787 21802437 -7202219 - SAR_DM Satellite Satellite -356 1116 477 1 751 27 73 0 0 chrUextra 21802919 21802974 -7201682 + AT_rich Low_complexity Low_complexity 1 55 0 1 751 23 68 0 0 chrUextra 21803012 21803056 -7201600 + AT_rich Low_complexity Low_complexity 1 44 0 1 751 26 30 0 0 chrUextra 21803102 21803135 -7201521 + AT_rich Low_complexity Low_complexity 1 33 0 1 751 1798 0 5 0 chrUextra 21803303 21803511 -7201145 - LSU-rRNA_Dme rRNA rRNA -1904 1996 1788 1 751 3507 0 5 2 chrUextra 21803555 21803969 -7200687 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1374 1 751 5541 11 1 1 chrUextra 21804069 21804735 -7199921 - R1_DM LINE R1 -1199 4157 3492 1 751 1491 179 17 6 chrUextra 21804835 21805498 -7199158 - SAR_DM Satellite Satellite -589 670 1 1 751 3015 152 23 39 chrUextra 21805603 21806266 -7198390 + TART LINE telomeric 9700 10351 -4126 1 751 2808 184 9 8 chrUextra 21806367 21807020 -7197636 + SAR_DM Satellite Satellite 284 937 -535 1 751 5769 0 3 1 chrUextra 21807133 21807799 -7196857 - SSU-rRNA_Dme rRNA rRNA -127 1868 1202 1 751 231 297 22 0 chrUextra 21807899 21807990 -7196666 + NOMAD_I LTR Gypsy 3984 4076 -2496 1 751 5493 21 0 0 chrUextra 21808665 21809331 -7195325 - R1_DM LINE R1 -751 4605 3940 1 751 2864 171 9 12 chrUextra 21809431 21810087 -7194569 + SAR_DM Satellite Satellite 420 1073 -399 1 751 5362 24 0 3 chrUextra 21810197 21810863 -7193793 + NINJA_I LTR Pao 5096 5759 -252 1 751 32 0 0 0 chrUextra 21811089 21811121 -7193535 + AT_rich Low_complexity Low_complexity 1 32 0 1 751 3249 3 0 3 chrUextra 21811253 21811629 -7193027 + SSU-rRNA_Dme rRNA rRNA 1 375 -1620 1 751 5590 5 0 3 chrUextra 21811729 21812395 -7192261 - DMRT1B LINE R1 -3454 1729 1066 1 751 1330 41 6 0 chrUextra 21812498 21812668 -7191988 + PROTOP_B DNA P 940 1110 -43 1 751 977 147 182 4 chrUextra 21812665 21812890 -7191766 - DMCR1A LINE CR1 -1125 3345 3081 1 751 932 153 120 5 chrUextra 21812977 21813161 -7191495 + DMLTR5 LTR Gypsy 40 244 -22 1 751 5850 1 0 0 chrUextra 21813261 21813927 -7190729 + SSU-rRNA_Dme rRNA rRNA 253 918 -1077 1 751 468 0 0 0 chrUextra 21814027 21814079 -7190577 + (CACAA)n Simple_repeat Simple_repeat 2 53 0 1 751 897 0 0 0 chrUextra 21814079 21814187 -7190469 + STALKER4_LTR LTR Gypsy 1 108 -294 1 751 4285 0 0 2 chrUextra 21814181 21814693 -7189963 + I_DM LINE I 3618 4128 -2103 1 751 301 270 118 85 chrUextra 21814799 21815070 -7189586 - Invader1_LTR LTR Gypsy -60 363 84 1 751 725 177 117 22 chrUextra 21815279 21815458 -7189198 + DMLTR5 LTR Gypsy 44 239 -27 1 751 336 0 0 0 chrUextra 21815559 21815604 -7189052 + NTS_DM Other Other 89 133 -107 1 751 1252 18 0 6 chrUextra 21815604 21815769 -7188887 + NTS_DM Other Other 38 201 -39 1 751 21 57 0 0 chrUextra 21815769 21815804 -7188852 + AT_rich Low_complexity Low_complexity 1 35 0 1 751 832 9 9 27 chrUextra 21815830 21815941 -7188715 + NTS_DM Other Other 25 133 -107 1 751 817 0 0 0 chrUextra 21815941 21816037 -7188619 + NTS_DM Other Other 38 133 -107 1 751 1287 27 16 21 chrUextra 21816037 21816225 -7188431 + NTS_DM Other Other 38 224 -16 1 751 2864 22 11 16 chrUextra 21816325 21816688 -7187968 - CIRCE LINE Composite -4108 2248 1888 1 751 579 296 42 57 chrUextra 21816353 21816755 -7187901 - Gypsy12_I LTR Gypsy -1316 4230 3835 1 751 1841 35 0 0 chrUextra 21816764 21816991 -7187665 - CIRCE LINE Composite -4474 1882 1656 1 751 5288 36 0 8 chrUextra 21817857 21818523 -7186133 - BATUMI_I LTR Pao -1896 6067 5407 1 751 2851 168 12 15 chrUextra 21818623 21819275 -7185381 - SAR_DM Satellite Satellite -454 1018 369 1 751 2406 88 12 31 chrUextra 21819389 21820055 -7184601 - DMSAT6 Satellite Satellite -23 653 1 1 751 5737 1 0 0 chrUextra 21820155 21820821 -7183835 - ROO_I LTR Pao -5637 2619 1954 1 751 1451 0 25 15 chrUextra 21820921 21821118 -7183538 + NTS_DM Other Other 42 240 0 1 751 1861 0 17 13 chrUextra 21821118 21821357 -7183299 + NTS_DM Other Other 1 240 0 1 751 1779 0 22 13 chrUextra 21821357 21821587 -7183069 + NTS_DM Other Other 1 232 -8 1 751 610 68 11 0 chrUextra 21821687 21821775 -7182881 - R1_DM LINE R1 -5267 89 1 1 751 4474 26 2 0 chrUextra 21821807 21822353 -7182303 - R1_DM LINE R1 0 5356 4810 1 751 2856 168 32 12 chrUextra 21823225 21823881 -7180775 + SAR_DM Satellite Satellite 369 1037 -435 1 751 5335 0 0 8 chrUextra 21823985 21824651 -7180005 + STALKER4_I LTR Gypsy 5710 6370 -160 1 751 394 39 0 0 chrUextra 21824758 21824809 -7179847 - R1_DM LINE R1 -5291 65 15 1 751 4938 31 2 0 chrUextra 21824808 21825417 -7179239 - R1_DM LINE R1 -551 4805 4196 1 751 830 0 0 0 chrUextra 21825517 21825612 -7179044 - NTS_DM Other Other -145 95 1 1 751 1847 4 17 13 chrUextra 21825612 21825851 -7178805 - NTS_DM Other Other 0 240 1 1 751 1843 4 17 13 chrUextra 21825851 21826090 -7178566 - NTS_DM Other Other 0 240 1 1 751 622 0 43 32 chrUextra 21826090 21826183 -7178473 - NTS_DM Other Other 0 240 147 1 751 5397 5 1 0 chrUextra 21826283 21826949 -7177707 + STALKER4_I LTR Gypsy 5661 6327 -203 1 751 230 281 11 11 chrUextra 21827473 21827563 -7177093 + BLASTOPIA_I LTR Gypsy 2646 2735 -1746 1 751 1014 7 0 0 chrUextra 21827815 21827951 -7176705 + HMSBEAGLE_I LTR Gypsy 652 787 -5742 1 751 974 29 52 12 chrUextra 21827971 21828143 -7176513 + (TTA)n Simple_repeat Simple_repeat 1 179 0 1 751 2673 12 6 3 chrUextra 21828143 21828481 -7176175 + HMSBEAGLE_I LTR Gypsy 969 1307 -5222 1 751 4281 39 54 36 chrUextra 21828581 21829247 -7175409 + PROTOP_A DNA P 265 942 -163 1 751 5509 1 1 0 chrUextra 21829349 21830013 -7174643 - R1_DM LINE R1 -4217 1139 475 1 751 430 204 0 11 chrUextra 21830131 21830225 -7174431 + HMSBEAGLE_I LTR Gypsy 5727 5819 -710 1 751 378 260 158 30 chrUextra 21830545 21830779 -7173877 + HMSBEAGLE_I LTR Gypsy 5810 6073 -456 1 751 1236 17 22 22 chrUextra 21830879 21831063 -7173593 + NTS_DM Other Other 57 240 0 1 751 1726 17 17 21 chrUextra 21831063 21831304 -7173352 + NTS_DM Other Other 1 240 0 1 751 1718 21 21 17 chrUextra 21831304 21831543 -7173113 + NTS_DM Other Other 1 240 0 1 751 5375 23 1 3 chrUextra 21831645 21832311 -7172345 + R1_DM LINE R1 3469 4133 -1223 1 751 344 0 135 0 chrUextra 21832411 21832507 -7172149 + (TA)n Simple_repeat Simple_repeat 2 110 0 1 751 4480 4 0 0 chrUextra 21832507 21833025 -7171631 - NOMAD_LTR LTR Gypsy 0 518 1 1 751 430 0 0 0 chrUextra 21833025 21833077 -7171579 - NOMAD_I LTR Gypsy 0 6572 6521 1 751 246 150 0 0 chrUextra 21833996 21834036 -7170620 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 751 22 56 0 0 chrUextra 21834134 21834170 -7170486 + AT_rich Low_complexity Low_complexity 1 36 0 1 751 3196 3 0 0 chrUextra 21834242 21834609 -7170047 - LSU-rRNA_Dme rRNA rRNA 0 3900 3534 1 751 3314 7 7 10 chrUextra 21834710 21835125 -7169531 + DM297_LTR LTR Gypsy 1 414 0 1 751 366 69 112 16 chrUextra 21835125 21835375 -7169281 + (TA)n Simple_repeat Simple_repeat 1 274 0 1 751 21 57 0 0 chrUextra 21835511 21835546 -7169110 + AT_rich Low_complexity Low_complexity 1 35 0 1 751 1150 36 0 0 chrUextra 21836002 21836141 -7168515 - PROTOP DNA P 0 4480 4342 1 751 5416 24 1 6 chrUextra 21836241 21836907 -7167749 + R1_DM LINE R1 3996 4658 -698 1 751 2695 12 70 11 chrUextra 21837007 21837645 -7167011 - CIRCE LINE Composite -2166 4190 3515 1 751 5661 9 1 1 chrUextra 21837773 21838439 -7166217 + Gypsy4_I LTR Gypsy 650 1315 -4973 1 751 555 53 0 0 chrUextra 21839130 21839205 -7165451 + (TTA)n Simple_repeat Simple_repeat 2 76 0 1 751 34 24 0 0 chrUextra 21839392 21839433 -7165223 + AT_rich Low_complexity Low_complexity 1 41 0 1 751 2230 106 11 33 chrUextra 21840071 21840734 -7163922 + DMSAT6 Satellite Satellite 1 648 -29 1 751 2587 192 19 24 chrUextra 21840837 21841503 -7163153 + SAR_DM Satellite Satellite 1 662 -208 1 751 5436 6 0 0 chrUextra 21841639 21842269 -7162387 - LSU-rRNA_Dme rRNA rRNA -1316 2584 1955 1 751 2644 195 11 11 chrUextra 21842371 21843035 -7161621 - SAR_DM Satellite Satellite -416 1056 393 1 751 2464 22 0 3 chrUextra 21843135 21843450 -7161206 - BATUMI_I LTR Pao -347 7616 7303 1 751 2700 15 9 9 chrUextra 21843458 21843801 -7160855 + BATUMI_I LTR Pao 6469 6811 -1152 1 751 1874 0 0 0 chrUextra 21844667 21844880 -7159776 + LSU-rRNA_Dme rRNA rRNA 2420 2632 -1268 1 751 3886 2 4 0 chrUextra 21844880 21845333 -7159323 + R1_DM LINE R1 1 455 -4901 1 751 5435 16 6 3 chrUextra 21845433 21846099 -7158557 + FW_DM LINE Jockey 3806 4473 -219 1 751 821 134 35 25 chrUextra 21846201 21846400 -7158256 + NTS_DM Other Other 40 240 0 1 751 262 125 21 0 chrUextra 21846400 21846448 -7158208 + NTS_DM Other Other 1 49 -191 1 751 24 32 0 0 chrUextra 21846478 21846509 -7158147 + AT_rich Low_complexity Low_complexity 1 31 0 1 751 1056 137 30 22 chrUextra 21846534 21846766 -7157890 + NTS_DM Other Other 7 240 0 1 751 285 104 21 0 chrUextra 21846766 21846814 -7157842 + NTS_DM Other Other 1 49 -191 1 751 1899 171 9 5 chrUextra 21846965 21847631 -7157025 + SAR_DM Satellite Satellite 1 668 -539 1 751 5578 3 0 3 chrUextra 21847733 21848397 -7156259 + MDG3_I LTR Gypsy 3012 3673 -1313 1 751 5720 6 0 0 chrUextra 21848497 21849163 -7155493 - R1_DM LINE R1 -723 4633 3968 1 751 40 79 0 0 chrUextra 21849263 21849352 -7155304 + AT_rich Low_complexity Low_complexity 1 89 0 1 751 1390 106 28 190 chrUextra 21849358 21849927 -7154729 - BATUMI_I LTR Pao -7074 889 413 1 751 2870 166 33 9 chrUextra 21850030 21850693 -7153963 + SAR_DM Satellite Satellite 378 1056 -416 1 751 327 49 0 0 chrUextra 21851420 21851461 -7153195 + (GAGAA)n Simple_repeat Simple_repeat 3 43 0 1 751 3735 0 2 0 chrUextra 21851561 21851987 -7152669 + SSU-rRNA_Dme rRNA rRNA 1569 1995 0 1 751 21 89 0 0 chrUextra 21852006 21852062 -7152594 + AT_rich Low_complexity Low_complexity 1 56 0 1 751 5055 26 0 19 chrUextra 21852327 21852993 -7151663 - MDG1_I LTR Gypsy -410 6186 5534 1 751 5442 24 1 1 chrUextra 21853859 21854525 -7150131 - R1_DM LINE R1 -1489 3867 3202 1 751 262 250 12 23 chrUextra 21855055 21855141 -7149515 + (CATA)n Simple_repeat Simple_repeat 1 85 0 1 751 1112 8 8 0 chrUextra 21855602 21855736 -7148920 - 5S_DM RNA RNA 0 135 1 1 751 809 11 0 0 chrUextra 21855963 21856057 -7148599 - 5S_DM RNA RNA 0 135 42 1 751 5490 2 0 0 chrUextra 21856157 21856788 -7147868 - ROO_I LTR Pao -691 7565 6935 1 751 293 0 0 0 chrUextra 21856788 21856823 -7147833 - ROO_I LTR Pao -2618 5638 5604 1 751 5590 3 6 3 chrUextra 21856923 21857589 -7147067 - LSU-rRNA_Dme rRNA rRNA -2184 1716 1049 1 751 1126 0 8 0 chrUextra 21857689 21857821 -7146835 - SSU-rRNA_Dme rRNA rRNA -1862 133 1 1 751 32 0 0 0 chrUextra 21857953 21857985 -7146671 + AT_rich Low_complexity Low_complexity 1 32 0 1 751 28 48 0 0 chrUextra 21858313 21858355 -7146301 + AT_rich Low_complexity Low_complexity 1 42 0 1 751 2200 91 11 74 chrUextra 21858478 21859121 -7145535 - DMSAT6 Satellite Satellite 0 602 1 1 751 1695 76 104 11 chrUextra 21859255 21859534 -7145122 + DNAREP1_DM LINE Penelope 290 594 0 1 751 30 0 0 0 chrUextra 21859790 21859820 -7144836 + AT_rich Low_complexity Low_complexity 1 30 0 1 751 1591 25 0 0 chrUextra 21859987 21860191 -7144465 + FW_DM LINE Jockey 4485 4688 -4 1 751 3623 37 2 2 chrUextra 21860192 21860653 -7144003 - R1_DM LINE R1 -3966 1390 930 1 751 5614 12 0 3 chrUextra 21860753 21861419 -7143237 + Invader1_I LTR Gypsy 255 918 -2268 1 751 255 103 0 0 chrUextra 21861586 21861625 -7143031 + (GA)n Simple_repeat Simple_repeat 1 39 0 1 751 5396 12 0 0 chrUextra 21862285 21862951 -7141705 + QUASIMODO_I LTR Gypsy 4050 4715 -1345 1 751 2551 26 129 0 chrUextra 21863051 21863717 -7140939 + PROTOP_A DNA P 260 876 -229 1 751 34 24 0 0 chrUextra 21864247 21864288 -7140368 + AT_rich Low_complexity Low_complexity 1 41 0 1 751 4106 37 0 0 chrUextra 21864583 21865094 -7139562 - R1_DM LINE R1 -3469 1887 1377 1 751 1206 27 0 0 chrUextra 21865102 21865249 -7139407 + FW_DM LINE Jockey 1 147 -4545 1 751 4130 6 4 2 chrUextra 21865349 21865848 -7138808 + IDEFIX_LTR LTR Gypsy 95 594 0 1 751 3644 176 8 1 chrUextra 21866115 21866781 -7137875 - ROVER-I_DM LTR Gypsy -1779 4805 4136 1 751 423 218 50 39 chrUextra 21866891 21867071 -7137585 + Gypsy12_LTR LTR Gypsy 939 1120 -1216 1 751 3622 11 0 63 chrUextra 21867071 21867547 -7137109 + MICROPIA_LTR LTR Gypsy 1 446 -30 1 751 3841 26 0 2 chrUextra 21867647 21868115 -7136541 - SSU-rRNA_Dme rRNA rRNA -1528 467 1 1 751 25 31 0 0 chrUextra 21868247 21868279 -7136377 + AT_rich Low_complexity Low_complexity 1 32 0 1 751 2429 77 6 6 chrUextra 21868413 21868765 -7135891 - R1_DM LINE R1 -4982 374 23 1 751 2479 14 0 0 chrUextra 21868786 21869079 -7135577 - R1_DM LINE R1 0 5356 5064 1 751 5586 0 1 3 chrUextra 21869179 21869845 -7134811 + DMRT1B LINE R1 2524 3188 -1995 1 751 2939 171 12 8 chrUextra 21869955 21870608 -7134048 - SAR_DM Satellite Satellite -535 937 282 1 751 2532 182 9 22 chrUextra 21870711 21871356 -7133300 + SAR_DM Satellite Satellite 483 1119 -353 1 751 322 162 48 57 chrUextra 21871270 21871375 -7133281 - XDMR_DM Unknown Unknown 0 360 257 1 751 479 330 63 46 chrUextra 21871486 21872140 -7132516 - HMSBEAGLE_I LTR Gypsy -1567 4962 4298 1 751 28 48 0 0 chrUextra 21872331 21872373 -7132283 + AT_rich Low_complexity Low_complexity 1 42 0 1 751 488 119 36 0 chrUextra 21872646 21872730 -7131926 - NTS_DM Other Other -150 90 4 1 751 376 16 0 45 chrUextra 21872840 21872906 -7131750 - NTS_DM Other Other -78 162 100 1 751 3363 100 69 35 chrUextra 21873006 21873671 -7130985 - STALKER4_I LTR Gypsy -5226 1304 617 1 751 1858 14 0 0 chrUextra 21873771 21873991 -7130665 - CIRCE LINE Composite -3102 3254 3035 1 751 3233 44 0 36 chrUextra 21873992 21874436 -7130220 - CIRCE LINE Composite -3442 2914 2487 1 751 262 106 0 21 chrUextra 21875080 21875128 -7129528 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 751 258 60 78 20 chrUextra 21875150 21875201 -7129455 - HMSBEAGLE_I LTR Gypsy -6464 65 12 1 751 4760 38 35 15 chrUextra 21875301 21875966 -7128690 + R1_DM LINE R1 554 1231 -4125 1 751 5425 20 1 3 chrUextra 21876066 21876731 -7127925 + DM1731_I LTR Copia 563 1226 -2750 1 751 2707 6 34 0 chrUextra 21877174 21877496 -7127160 + Copia2_I LTR Copia 3526 3858 -304 1 751 2570 179 15 42 chrUextra 21877596 21878261 -7126395 - SAR_DM Satellite Satellite -542 930 284 1 751 2296 99 1 38 chrUextra 21878361 21879026 -7125630 + DMSAT6 Satellite Satellite 1 640 -159 1 751 1192 18 0 18 chrUextra 21879145 21879312 -7125344 - NTS_DM Other Other -39 201 38 1 751 870 9 0 27 chrUextra 21879312 21879424 -7125232 - NTS_DM Other Other -107 133 25 1 751 22 56 0 0 chrUextra 21879450 21879486 -7125170 + AT_rich Low_complexity Low_complexity 1 36 0 1 751 255 125 0 0 chrUextra 21879499 21879539 -7125117 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 751 246 150 0 0 chrUextra 21879582 21879622 -7125034 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 751 246 150 0 0 chrUextra 21879674 21879714 -7124942 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 751 4894 0 0 42 chrUextra 21879893 21880513 -7124143 - LSU-rRNA_Dme rRNA rRNA -3306 594 1 1 751 518 181 374 50 chrUextra 21880656 21880974 -7123682 + TART LINE telomeric 10069 10489 -3988 1 751 34 24 0 0 chrUextra 21880987 21881028 -7123628 + AT_rich Low_complexity Low_complexity 1 41 0 1 751 365 304 60 60 chrUextra 21881497 21882068 -7122588 - BLASTOPIA_I LTR Gypsy -1859 3029 2180 1 751 5741 3 0 0 chrUextra 21882186 21882851 -7121805 + STALKER4_I LTR Gypsy 3586 4250 -2280 1 751 5580 9 0 0 chrUextra 21882951 21883616 -7121040 - HETA LINE telomeric -4827 1254 590 1 751 5358 26 0 3 chrUextra 21883716 21884381 -7120275 + R1_DM LINE R1 2203 2865 -2491 1 751 2122 4 0 88 chrUextra 21884481 21884777 -7119879 - LSU-rRNA_Dme rRNA rRNA -3630 270 1 1 751 21 95 0 0 chrUextra 21884789 21884852 -7119804 + AT_rich Low_complexity Low_complexity 1 63 0 1 751 34 24 0 0 chrUextra 21885065 21885106 -7119550 + AT_rich Low_complexity Low_complexity 1 41 0 1 751 5765 3 0 0 chrUextra 21885246 21885911 -7118745 - STALKER4_I LTR Gypsy -2233 4297 3633 1 751 1494 33 127 0 chrUextra 21886011 21886342 -7118314 - DMCR1A LINE CR1 -198 4272 3900 1 751 2701 182 9 8 chrUextra 21886776 21887406 -7117250 - SAR_DM Satellite Satellite -647 825 195 1 751 813 94 0 0 chrUextra 21887313 21887441 -7117215 + ARS406_DM Unknown Unknown 1 128 -225 1 751 3648 126 23 0 chrUextra 21887542 21888206 -7116450 - TART_B1 LINE telomeric -8930 1724 1058 1 751 5987 3 0 3 chrUextra 21888306 21888971 -7115685 + FW_DM LINE Jockey 507 1169 -3523 1 752 2061 47 0 0 chrUextra 21889071 21889327 -7115329 - R1_DM LINE R1 -4463 893 638 1 752 1299 60 6 0 chrUextra 21889325 21889492 -7115164 - R1_DM LINE R1 -5188 168 1 1 752 1015 26 0 0 chrUextra 21889525 21889639 -7115017 - R1_DM LINE R1 0 5356 5243 1 752 855 10 0 0 chrUextra 21889636 21889736 -7114920 - R1_DM LINE R1 -290 5066 4967 1 752 3175 170 32 11 chrUextra 21889836 21890501 -7114155 + SAR_DM Satellite Satellite 378 1056 -416 1 752 2423 94 11 51 chrUextra 21890603 21891266 -7113390 - DMSAT6 Satellite Satellite -109 635 1 1 752 1620 0 0 0 chrUextra 21891714 21892031 -7112625 + (CAAGA)n Simple_repeat Simple_repeat 1 317 0 1 752 6049 1 0 0 chrUextra 21892131 21892796 -7111860 - STALKER4_I LTR Gypsy -4498 2032 1368 1 752 4958 9 7 0 chrUextra 21892896 21893444 -7111212 + BS LINE Jockey 4573 5124 -2 1 752 1726 0 0 0 chrUextra 21893661 21893870 -7110786 + HMSBEAGLE_I LTR Gypsy 579 787 -5742 1 752 974 29 52 12 chrUextra 21893882 21894054 -7110602 + (TTA)n Simple_repeat Simple_repeat 1 179 0 1 752 2363 4 15 0 chrUextra 21894054 21894326 -7110330 + HMSBEAGLE_I LTR Gypsy 969 1244 -5285 1 752 5073 3 0 3 chrUextra 21894426 21895001 -7109655 - STALKER4_I LTR Gypsy -4687 1843 1271 1 752 736 0 0 0 chrUextra 21894999 21895080 -7109576 - STALKER4_I LTR Gypsy -5367 1163 1083 1 752 3300 169 9 8 chrUextra 21895191 21895843 -7108813 + SAR_DM Satellite Satellite 402 1054 -418 1 752 1723 20 0 5 chrUextra 21895956 21896161 -7108495 - NTS_DM Other Other -36 204 1 1 752 1882 21 17 17 chrUextra 21896161 21896401 -7108255 - NTS_DM Other Other 0 240 1 1 752 1694 19 18 18 chrUextra 21896401 21896621 -7108035 - NTS_DM Other Other 0 240 21 1 752 3030 172 46 12 chrUextra 21896726 21897374 -7107282 - SAR_DM Satellite Satellite -434 1038 369 1 752 4519 15 0 2 chrUextra 21897486 21898029 -7106627 + DM297_I LTR Gypsy 5626 6167 0 1 752 1005 25 16 8 chrUextra 21898030 21898151 -7106505 + DM297_LTR LTR Gypsy 1 122 -292 1 752 5997 1 0 3 chrUextra 21898251 21898916 -7105740 + R1_DM LINE R1 3015 3677 -1679 1 752 5068 72 30 0 chrUextra 21899016 21899681 -7104975 - TART_B1 LINE telomeric -7241 3413 2729 1 752 3512 162 8 8 chrUextra 21899781 21900446 -7104210 + SAR_DM Satellite Satellite 373 1037 -435 1 752 5928 3 0 0 chrUextra 21900546 21901211 -7103445 - ROO_I LTR Pao -2951 5305 4641 1 752 2393 45 0 10 chrUextra 21901683 21901974 -7102682 - QUASIMODO_LTR LTR Gypsy 0 658 371 1 752 2746 90 4 31 chrUextra 21902326 21902739 -7101917 - QUASIMODO_LTR LTR Gypsy 0 658 130 1 752 991 79 6 18 chrUextra 21902841 21903506 -7101150 + RSP Satellite Satellite 1 657 0 1 752 2564 97 36 12 chrUextra 21903606 21904268 -7100388 - DMSAT6 Satellite Satellite -90 678 1 1 752 5758 29 6 0 chrUextra 21904371 21905036 -7099620 + Copia2_I LTR Copia 1943 2611 -1551 1 752 4902 33 3 2 chrUextra 21905136 21905713 -7098943 - R1_DM LINE R1 -372 4984 4407 1 752 592 15 0 0 chrUextra 21905733 21905801 -7098855 - R1_DM LINE R1 -1074 4282 4215 1 752 5761 29 0 0 chrUextra 21905901 21906566 -7098090 - R1_DM LINE R1 -1663 3693 3029 1 752 6102 1 0 0 chrUextra 21906666 21907331 -7097325 + QUASIMODO_I LTR Gypsy 2081 2745 -3315 1 752 5479 35 1 6 chrUextra 21907431 21908096 -7096560 + TC1-2_DM DNA Tc1 29 690 -954 1 752 1620 0 0 0 chrUextra 21908196 21908498 -7096158 + (GAGAA)n Simple_repeat Simple_repeat 1 302 0 1 752 4673 4 2 2 chrUextra 21909109 21909626 -7095030 + NOMAD_LTR LTR Gypsy 1 517 -1 1 752 21 89 0 0 chrUextra 21909815 21909871 -7094785 + AT_rich Low_complexity Low_complexity 1 56 0 1 752 23 68 0 0 chrUextra 21909909 21909953 -7094703 + AT_rich Low_complexity Low_complexity 1 44 0 1 752 26 30 0 0 chrUextra 21909999 21910032 -7094624 + AT_rich Low_complexity Low_complexity 1 33 0 1 752 988 16 0 110 chrUextra 21910491 21910627 -7094029 + LSU-rRNA_Dme rRNA rRNA 2512 2632 -1268 1 752 4788 6 4 0 chrUextra 21910627 21911155 -7093501 + R1_DM LINE R1 1 530 -4826 1 752 4230 2 0 2 chrUextra 21911256 21911713 -7092943 - R2_DM LINE R2 -3149 458 3 1 752 1966 0 0 0 chrUextra 21911711 21911921 -7092735 - LSU-rRNA_Dme rRNA rRNA -1345 2555 2346 1 752 5768 11 1 1 chrUextra 21912021 21912686 -7091970 + QUASIMODO_I LTR Gypsy 1157 1821 -4239 1 752 6104 6 0 0 chrUextra 21912786 21913450 -7091206 + Gypsy4_I LTR Gypsy 1566 2229 -4059 1 752 534 119 36 0 chrUextra 21913701 21913785 -7090871 + NTS_DM Other Other 4 90 -150 1 752 28 48 0 0 chrUextra 21914058 21914100 -7090556 + AT_rich Low_complexity Low_complexity 1 42 0 1 752 688 0 13 0 chrUextra 21914138 21914216 -7090440 - NOMAD_LTR LTR Gypsy 0 518 440 1 752 6011 1 0 1 chrUextra 21914316 21914981 -7089675 + R1_DM LINE R1 2879 3542 -1814 1 752 4154 27 67 2 chrUextra 21915081 21915724 -7088932 - CIRCE LINE Composite -2909 3447 2763 1 752 4798 57 47 16 chrUextra 21915846 21916511 -7088145 + R1_DM LINE R1 343 1027 -4329 1 752 3139 172 5 23 chrUextra 21916611 21917276 -7087380 - SAR_DM Satellite Satellite -615 857 205 1 752 3849 41 51 2 chrUextra 21917376 21917863 -7086793 - R1_DM LINE R1 -4125 1231 721 1 752 1323 48 6 12 chrUextra 21917874 21918041 -7086615 - R1_DM LINE R1 -4955 401 236 1 752 642 14 0 0 chrUextra 21918141 21918211 -7086445 - NTS_DM Other Other -170 70 1 1 752 1878 21 17 17 chrUextra 21918211 21918451 -7086205 - NTS_DM Other Other 0 240 1 1 752 1899 17 17 17 chrUextra 21918451 21918691 -7085965 - NTS_DM Other Other 0 240 1 1 752 726 36 35 35 chrUextra 21918691 21918806 -7085850 - NTS_DM Other Other 0 240 126 1 752 2233 181 40 8 chrUextra 21918906 21919549 -7085107 + SAR_DM Satellite Satellite 1 663 -590 1 752 4970 48 48 8 chrUextra 21919671 21920336 -7084320 + R1_DM LINE R1 536 1227 -4129 1 752 4373 2 0 0 chrUextra 21920436 21920908 -7083748 + Gypsy4_I LTR Gypsy 5817 6288 0 1 752 1475 16 5 57 chrUextra 21920908 21921101 -7083555 + Gypsy4_LTR LTR Gypsy 1 183 -104 1 752 2016 54 19 4 chrUextra 21921201 21921462 -7083194 + DIVER2_I LTR Pao 2178 2442 -1705 1 752 688 0 0 0 chrUextra 21922138 21922213 -7082443 - Copia2_LTR_DM LTR Copia -95 103 29 1 752 3791 7 5 0 chrUextra 21922213 21922628 -7082028 - Invader1_LTR LTR Gypsy 0 423 7 1 752 632 40 0 0 chrUextra 21922731 21922806 -7081850 - DMCR1A LINE CR1 -1142 3328 3254 1 752 2999 52 0 0 chrUextra 21922804 21923171 -7081485 - FW_DM LINE Jockey -4233 459 93 1 752 730 35 0 0 chrUextra 21923496 21923582 -7081074 + BATUMI_I LTR Pao 7199 7284 -679 1 752 2988 87 105 37 chrUextra 21923582 21924143 -7080513 + BATUMI_I LTR Pao 1 599 -7364 1 752 1113 322 14 14 chrUextra 21924481 21924922 -7079734 + Invader6_I LTR Gypsy 1726 2166 -1933 1 752 3084 180 12 14 chrUextra 21925791 21926456 -7078200 - SAR_DM Satellite Satellite -553 919 256 1 752 5883 18 1 1 chrUextra 21926556 21927221 -7077435 - R2_DM LINE R2 -646 2961 2297 1 752 5930 1 0 0 chrUextra 21927321 21927986 -7076670 + ROO_I LTR Pao 4601 5265 -2991 1 752 5995 16 0 1 chrUextra 21928086 21928751 -7075905 + MAX_I LTR Pao 6086 6749 -1165 1 752 6019 0 0 0 chrUextra 21928851 21929516 -7075140 - ROO_I LTR Pao -3122 5134 4470 1 752 434 36 18 0 chrUextra 21929616 21929671 -7074985 + R1_DM LINE R1 5301 5356 0 1 752 4536 57 9 3 chrUextra 21929704 21930281 -7074375 + R1_DM LINE R1 1 580 -4776 1 752 1079 177 56 17 chrUextra 21930381 21931015 -7073641 + SAR_DM Satellite Satellite 1 658 -1040 1 752 5723 21 0 1 chrUextra 21931148 21931811 -7072845 + STALKER4_I LTR Gypsy 2416 3077 -3453 1 752 1057 23 0 8 chrUextra 21931911 21932043 -7072613 - NTS_DM Other Other -72 168 38 1 752 936 9 0 27 chrUextra 21932043 21932155 -7072501 - NTS_DM Other Other -107 133 25 1 752 1350 18 0 6 chrUextra 21932208 21932373 -7072283 - NTS_DM Other Other -39 201 38 1 752 936 9 0 27 chrUextra 21932373 21932485 -7072171 - NTS_DM Other Other -107 133 25 1 752 22 56 0 0 chrUextra 21932511 21932547 -7072109 + AT_rich Low_complexity Low_complexity 1 36 0 1 752 6059 0 3 5 chrUextra 21932676 21933341 -7071315 - SSU-rRNA_Dme rRNA rRNA -216 1779 1116 1 752 6009 6 0 1 chrUextra 21933444 21934106 -7070550 + R1_DM LINE R1 4182 4842 -514 1 752 1995 4 17 13 chrUextra 21934222 21934461 -7070195 - NTS_DM Other Other 0 240 1 1 752 1878 21 17 17 chrUextra 21934461 21934701 -7069955 - NTS_DM Other Other 0 240 1 1 752 1210 18 24 24 chrUextra 21934701 21934871 -7069785 - NTS_DM Other Other 0 240 71 1 752 4809 98 2 2 chrUextra 21934971 21935616 -7069040 - R1_DM LINE R1 -3613 1743 1099 1 752 1803 0 22 14 chrUextra 21935736 21935958 -7068698 + NTS_DM Other Other 17 240 0 1 752 2006 0 17 13 chrUextra 21935958 21936197 -7068459 + NTS_DM Other Other 1 240 0 1 752 1657 0 0 0 chrUextra 21936197 21936381 -7068275 + NTS_DM Other Other 1 184 -56 1 752 2307 107 15 16 chrUextra 21936501 21937166 -7067490 - DMSAT6 Satellite Satellite -58 664 1 1 752 5652 38 5 0 chrUextra 21937266 21937931 -7066725 + R1_DM LINE R1 1397 2064 -3292 1 752 3312 161 12 15 chrUextra 21938033 21938696 -7065960 + SAR_DM Satellite Satellite 342 1002 -470 1 752 2342 0 8 0 chrUextra 21938796 21939055 -7065601 - R1_DM LINE R1 -5095 261 1 1 752 3800 0 0 0 chrUextra 21939055 21939461 -7065195 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2227 1 752 1827 176 90 51 chrUextra 21939561 21940029 -7064627 - TAHRE LINE telomeric -2934 7529 7044 1 752 1426 86 0 0 chrUextra 21940028 21940226 -7064430 - TAHRE LINE telomeric -12 10451 10254 1 752 3021 187 18 9 chrUextra 21940326 21940991 -7063665 + SAR_DM Satellite Satellite 180 850 -622 1 752 5911 19 0 0 chrUextra 21941091 21941756 -7062900 + DMRT1A LINE R1 3618 4282 -901 1 752 3060 185 14 6 chrUextra 21941857 21942500 -7062156 - SAR_DM Satellite Satellite -633 839 192 1 752 796 103 0 0 chrUextra 21942404 21942521 -7062135 + ARS406_DM Unknown Unknown 1 117 -236 1 752 1041 95 0 5 chrUextra 21942624 21942828 -7061828 + (ACATG)n Simple_repeat Simple_repeat 1 203 0 1 752 1065 90 0 0 chrUextra 21942828 21943005 -7061651 + (CAAGA)n Simple_repeat Simple_repeat 4 180 0 1 752 1125 85 0 14 chrUextra 21943005 21943286 -7061370 + (ACATG)n Simple_repeat Simple_repeat 1 277 0 1 752 5924 1 1 1 chrUextra 21943386 21944051 -7060605 - R1_DM LINE R1 -3896 1460 796 1 752 4599 86 5 3 chrUextra 21944152 21944816 -7059840 + STALKER4_I LTR Gypsy 5769 6433 -97 1 752 1417 0 0 0 chrUextra 21944916 21945067 -7059589 + LSU-rRNA_Dme rRNA rRNA 3746 3896 -4 1 752 268 196 0 19 chrUextra 21945175 21945227 -7059429 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 752 268 196 0 19 chrUextra 21945267 21945319 -7059337 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 752 268 196 0 19 chrUextra 21945359 21945411 -7059245 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 752 278 176 0 19 chrUextra 21945442 21945494 -7059162 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 752 22 56 0 0 chrUextra 21945507 21945543 -7059113 + AT_rich Low_complexity Low_complexity 1 36 0 1 752 3471 30 0 27 chrUextra 21945681 21946095 -7058561 + CIRCE LINE Composite 1483 1885 -4471 1 752 549 315 49 20 chrUextra 21946089 21946335 -7058321 + Gypsy12_I LTR Gypsy 3823 4075 -1471 1 752 1560 0 0 43 chrUextra 21946162 21946346 -7058310 + CIRCE LINE Composite 1884 2059 -4297 1 752 4384 75 49 16 chrUextra 21946446 21947083 -7057573 - MDG1_I LTR Gypsy -5938 658 1 1 752 6048 0 0 1 chrUextra 21947211 21947876 -7056780 + R1_DM LINE R1 1250 1913 -3443 1 752 1047 131 59 20 chrUextra 21947976 21948178 -7056478 - MDG1_I LTR Gypsy -6386 210 1 1 752 2035 101 10 3 chrUextra 21948178 21948466 -7056190 - MDG1_LTR LTR Gypsy -30 412 123 1 752 372 88 0 0 chrUextra 21948478 21948535 -7056121 + (TTA)n Simple_repeat Simple_repeat 3 59 0 1 752 547 51 103 0 chrUextra 21948563 21948641 -7056015 + DM176_I LTR Gypsy 2360 2445 -3975 1 752 5726 26 3 1 chrUextra 21948741 21949406 -7055250 + R1_DM LINE R1 3188 3853 -1503 1 752 3189 181 15 9 chrUextra 21949507 21950166 -7054490 + SAR_DM Satellite Satellite 252 914 -558 1 752 3661 0 0 0 chrUextra 21950271 21950661 -7053995 + LSU-rRNA_Dme rRNA rRNA 3511 3900 0 1 752 268 196 0 19 chrUextra 21950762 21950814 -7053842 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 752 245 216 0 19 chrUextra 21950854 21950906 -7053750 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 752 5650 42 0 0 chrUextra 21951036 21951701 -7052955 - R1_DM LINE R1 -3448 1908 1244 1 752 437 20 0 0 chrUextra 21951801 21951850 -7052806 - NTS_DM Other Other -191 49 1 1 752 1872 21 17 21 chrUextra 21951850 21952091 -7052565 - NTS_DM Other Other 0 240 1 1 752 1506 25 20 20 chrUextra 21952091 21952294 -7052362 - NTS_DM Other Other 0 240 38 1 752 876 0 0 0 chrUextra 21952294 21952390 -7052266 - NTS_DM Other Other -107 133 38 1 752 609 13 13 0 chrUextra 21952390 21952466 -7052190 - NTS_DM Other Other -107 133 57 1 752 779 123 24 55 chrUextra 21952608 21952772 -7051884 - ROVER-I_DM LTR Gypsy -6295 289 131 1 752 433 165 13 0 chrUextra 21952865 21952944 -7051712 - ROVER-I_DM LTR Gypsy -6504 80 1 1 752 1494 108 94 35 chrUextra 21952944 21953231 -7051425 - ROVER-LTR_DM LTR Gypsy 0 367 64 1 752 5152 50 1 18 chrUextra 21953331 21953996 -7050660 + R1_DM LINE R1 209 862 -4494 1 752 1390 11 0 11 chrUextra 21954861 21955029 -7049627 + HMSBEAGLE_I LTR Gypsy 629 796 -5733 1 752 974 29 52 12 chrUextra 21955029 21955201 -7049455 + (TTA)n Simple_repeat Simple_repeat 1 179 0 1 752 2881 0 9 0 chrUextra 21955201 21955526 -7049130 + HMSBEAGLE_I LTR Gypsy 969 1296 -5233 1 752 4648 68 0 3 chrUextra 21955626 21956280 -7048376 + BATUMI_I LTR Pao 5902 6796 -1118 1 752 6009 1 0 0 chrUextra 21956391 21957056 -7047600 - ROO_I LTR Pao -4260 3996 3332 1 752 750 89 0 10 chrUextra 21957160 21957262 -7047394 - DNAREP1_DM LINE Penelope -493 101 1 1 752 1450 156 50 203 chrUextra 21957288 21957770 -7046886 + HOBO DNA hAT 1 408 -2608 1 752 317 115 66 0 chrUextra 21957760 21957821 -7046835 + HOBO DNA hAT 2337 2401 -615 1 752 1215 15 0 0 chrUextra 21958163 21958298 -7046358 + 5S_DM RNA RNA 1 135 0 1 752 415 0 0 0 chrUextra 21958539 21958586 -7046070 + 5S_DM RNA RNA 1 47 -88 1 752 4777 22 0 40 chrUextra 21958686 21959075 -7045581 - DM176_I LTR Gypsy -5517 903 528 1 752 208 28 26 53 chrUextra 21959075 21959113 -7045543 + (TTA)n Simple_repeat Simple_repeat 3 39 0 1 752 4777 22 0 40 chrUextra 21959113 21959351 -7045305 - DM176_I LTR Gypsy -5893 527 301 1 752 5388 45 45 1 chrUextra 21959451 21960116 -7044540 - R1_DM LINE R1 -3615 1741 1048 1 752 5402 38 5 12 chrUextra 21960981 21961646 -7043010 - BATUMI_I LTR Pao -5583 2380 1721 1 752 2226 0 4 4 chrUextra 21961746 21961990 -7042666 + SSU-rRNA_Dme rRNA rRNA 1752 1995 0 1 752 4245 41 4 6 chrUextra 21962511 21963176 -7041480 + R1_DM LINE R1 2670 3366 -1990 1 752 3288 163 19 11 chrUextra 21963276 21963941 -7040715 + SAR_DM Satellite Satellite 180 850 -622 1 752 6060 0 6 0 chrUextra 21964041 21964706 -7039950 + ROO_I LTR Pao 7331 7999 -257 1 752 5385 17 3 35 chrUextra 21964807 21965471 -7039185 - G_DM LINE Jockey -3 4343 3701 1 752 6197 0 1 0 chrUextra 21965571 21966236 -7038420 + SSU-rRNA_Dme rRNA rRNA 497 1162 -833 1 752 6132 6 0 0 chrUextra 21966336 21967001 -7037655 - Gypsy4_I LTR Gypsy -2296 3992 3328 1 752 525 83 135 0 chrUextra 21967885 21967981 -7036675 - TART_B1 LINE telomeric -8315 2339 2231 1 752 4450 4 0 2 chrUextra 21967995 21968483 -7036173 - DMRT1B LINE R1 0 5183 4697 1 752 447 19 0 0 chrUextra 21968479 21968531 -7036125 - DMRT1B LINE R1 -446 4737 4686 1 752 6214 0 0 1 chrUextra 21969396 21970061 -7034595 - SSU-rRNA_Dme rRNA rRNA -1108 887 224 1 752 1865 5 5 9 chrUextra 21970161 21970383 -7034273 - QUASIMODO_LTR LTR Gypsy -437 221 1 1 752 3659 9 14 0 chrUextra 21970383 21970826 -7033830 - QUASIMODO_I LTR Gypsy 0 6060 5612 1 752 5892 16 0 0 chrUextra 21970926 21971591 -7033065 - R1_DM LINE R1 -819 4537 3873 1 752 30 27 0 0 chrUextra 21972125 21972162 -7032494 + AT_rich Low_complexity Low_complexity 1 37 0 1 752 5741 30 0 0 chrUextra 21972456 21973121 -7031535 - FW_DM LINE Jockey -3909 783 119 1 752 2321 96 22 46 chrUextra 21973221 21973886 -7030770 + DMSAT6 Satellite Satellite 1 649 -147 1 752 4394 56 47 20 chrUextra 21973996 21974651 -7030005 + STALKER4_I LTR Gypsy 919 1591 -4939 1 752 3229 152 27 23 chrUextra 21974751 21975416 -7029240 + SAR_DM Satellite Satellite 301 968 -504 1 752 3298 179 8 8 chrUextra 21975516 21976181 -7028475 - SAR_DM Satellite Satellite -558 914 250 1 752 6032 5 0 0 chrUextra 21976281 21976946 -7027710 - R1_DM LINE R1 -1663 3693 3029 1 752 3024 179 8 11 chrUextra 21977046 21977689 -7026967 - SAR_DM Satellite Satellite -640 832 192 1 752 821 93 0 8 chrUextra 21977592 21977711 -7026945 + ARS406_DM Unknown Unknown 1 118 -235 1 752 1789 15 0 0 chrUextra 21977811 21978009 -7026647 + Invader1_I LTR Gypsy 1484 1681 -1505 1 752 4335 2 2 0 chrUextra 21978011 21978476 -7026180 + Invader1_I LTR Gypsy 1819 2284 -902 1 752 5774 12 1 3 chrUextra 21978579 21979241 -7025415 - R1_DM LINE R1 -1220 4136 3476 1 752 2382 59 216 0 chrUextra 21979341 21979698 -7024958 + PROTOP DNA P 4038 4471 -9 1 752 1989 0 0 0 chrUextra 21979787 21980006 -7024650 + Copia_I LTR Copia 36 254 -4339 1 752 1064 8 52 0 chrUextra 21980106 21980240 -7024416 - QUASIMODO_LTR LTR Gypsy -517 141 1 1 752 4433 4 6 0 chrUextra 21980240 21980771 -7023885 - QUASIMODO_I LTR Gypsy 0 6060 5527 1 752 3503 169 6 8 chrUextra 21980871 21981535 -7023121 - SAR_DM Satellite Satellite -439 1033 371 1 752 5916 15 0 3 chrUextra 21981636 21982301 -7022355 + G_DM LINE Jockey 2895 3557 -789 1 752 4365 18 4 0 chrUextra 21982401 21982903 -7021753 + IDEFIX_LTR LTR Gypsy 91 594 0 1 752 3147 186 8 6 chrUextra 21983947 21984596 -7020060 - SAR_DM Satellite Satellite -396 1076 427 1 752 1793 21 17 29 chrUextra 21984696 21984937 -7019719 - NTS_DM Other Other -2 238 1 1 752 1899 17 17 17 chrUextra 21984937 21985177 -7019479 - NTS_DM Other Other 0 240 1 1 752 1264 33 22 22 chrUextra 21985177 21985361 -7019295 - NTS_DM Other Other 0 240 57 1 752 3206 41 31 7 chrUextra 21985461 21985876 -7018780 - HETA LINE telomeric -2328 3753 3329 1 752 2004 32 0 4 chrUextra 21985878 21986126 -7018530 + NINJA_I LTR Pao 5579 5825 -186 1 752 3351 164 12 9 chrUextra 21986227 21986890 -7017766 + SAR_DM Satellite Satellite 369 1033 -439 1 752 5598 21 0 5 chrUextra 21986991 21987656 -7017000 - Copia_I LTR Copia -611 3982 3321 1 752 6101 1 0 0 chrUextra 21987756 21988421 -7016235 + FW_DM LINE Jockey 3833 4497 -195 1 752 3218 169 12 12 chrUextra 21988521 21989168 -7015488 + SAR_DM Satellite Satellite 430 1076 -396 1 752 5673 36 0 3 chrUextra 21989286 21989951 -7014705 - R1_DM LINE R1 -3456 1900 1238 1 752 2813 195 36 6 chrUextra 21990055 21990716 -7013940 - SAR_DM Satellite Satellite -535 937 257 1 752 6108 3 0 0 chrUextra 21991581 21992246 -7012410 + ROO_I LTR Pao 6789 7453 -803 1 752 4346 48 78 1 chrUextra 21992346 21993011 -7011645 - PROTOP DNA P -3727 753 108 1 752 2053 293 17 17 chrUextra 21993114 21993771 -7010885 + MICROPIA_I LTR Gypsy 2540 3196 -1280 1 752 424 246 118 100 chrUextra 21994022 21994302 -7010354 - Invader1_LTR LTR Gypsy -55 368 84 1 752 6042 0 1 0 chrUextra 21994641 21995306 -7009350 - ROO_I LTR Pao -5932 2324 1659 1 752 5840 27 1 0 chrUextra 21995406 21996071 -7008585 + DMCR1A LINE CR1 2225 2890 -1580 1 752 382 213 21 0 chrUextra 21996188 21996282 -7008374 - XDMR_DM Unknown Unknown -7 353 258 1 752 1081 192 29 14 chrUextra 21996293 21996800 -7007856 + SAR_DM Satellite Satellite 1 514 -680 1 752 2987 222 5 9 chrUextra 21996936 21997596 -7007060 + G_DM LINE Jockey 2582 3238 -1108 1 752 262 250 12 23 chrUextra 21998183 21998269 -7006387 + (CATA)n Simple_repeat Simple_repeat 1 85 0 1 752 3277 178 6 8 chrUextra 21998467 21999131 -7005525 + SAR_DM Satellite Satellite 195 857 -615 1 752 246 164 0 35 chrUextra 21999231 21999288 -7005368 + XDMR_DM Unknown Unknown 297 351 -9 1 752 2800 186 14 36 chrUextra 21999238 21999896 -7004760 - SAR_DM Satellite Satellite -382 1090 448 1 752 5677 29 0 0 chrUextra 22000005 22000661 -7003995 + DMRT1A LINE R1 2030 2685 -2498 1 752 3232 178 9 6 chrUextra 22000761 22001416 -7003240 + SAR_DM Satellite Satellite 247 903 -569 1 752 2464 159 142 21 chrUextra 22001525 22002189 -7002467 - TART LINE telomeric -4745 9732 9025 1 752 5665 32 0 0 chrUextra 22002291 22002953 -7001703 + R1_DM LINE R1 2613 3274 -2082 1 752 2323 93 6 53 chrUextra 22003053 22003717 -7000939 + DMSAT6 Satellite Satellite 1 632 -85 1 752 5663 29 0 0 chrUextra 22003817 22004481 -7000175 + MDG1_I LTR Gypsy 3203 3866 -2730 1 752 5949 9 0 0 chrUextra 22004581 22005245 -6999411 - QUASIMODO_I LTR Gypsy -2513 3547 2884 1 752 5861 14 1 3 chrUextra 22005345 22006009 -6998647 + DMRT1A LINE R1 3157 3819 -1364 1 752 5542 31 3 18 chrUextra 22006109 22006771 -6997885 - CIRCE LINE Composite -3099 3257 2606 1 752 3282 172 12 9 chrUextra 22006873 22007537 -6997119 + SAR_DM Satellite Satellite 341 1006 -466 1 752 3278 178 6 6 chrUextra 22007637 22008297 -6996359 + SAR_DM Satellite Satellite 220 879 -593 1 752 3282 170 11 9 chrUextra 22008401 22009065 -6995591 - SAR_DM Satellite Satellite -404 1068 404 1 752 897 85 0 0 chrUextra 22009929 22010059 -6994597 - ARS406_DM Unknown Unknown -223 130 1 1 752 2950 180 12 9 chrUextra 22009953 22010593 -6994063 + SAR_DM Satellite Satellite 180 821 -651 1 752 5442 47 0 11 chrUextra 22010694 22011357 -6993299 + R1_DM LINE R1 1213 1868 -3488 1 752 492 18 0 0 chrUextra 22011457 22011514 -6993142 + (CAATA)n Simple_repeat Simple_repeat 1 57 0 1 752 398 43 0 0 chrUextra 22012221 22012268 -6992388 - R1_DM LINE R1 -67 5289 5243 1 752 5369 20 2 10 chrUextra 22012265 22012885 -6991771 - R1_DM LINE R1 -290 5066 4452 1 752 2985 166 12 22 chrUextra 22012985 22013627 -6991029 - SAR_DM Satellite Satellite -645 827 192 1 752 785 102 0 8 chrUextra 22013530 22013649 -6991007 + ARS406_DM Unknown Unknown 1 118 -235 1 752 3414 3 0 0 chrUextra 22013749 22014120 -6990536 + R1_DM LINE R1 4986 5356 0 1 752 585 0 0 0 chrUextra 22014133 22014196 -6990460 + R1_DM LINE R1 5294 5356 0 1 752 2041 5 0 0 chrUextra 22014194 22014413 -6990243 + LSU-rRNA_Dme rRNA rRNA 2640 2858 -1042 1 752 612 23 11 11 chrUextra 22014513 22014602 -6990054 + ACCORD2_I LTR Gypsy 1686 1774 -5438 1 752 1148 83 21 103 chrUextra 22014613 22014855 -6989801 + ACCORD2_I LTR Gypsy 1553 1774 -5438 1 752 661 69 0 0 chrUextra 22014848 22014933 -6989723 + ACCORD2_I LTR Gypsy 7122 7206 -6 1 752 1857 23 0 18 chrUextra 22014933 22015151 -6989505 + ACCORD2_LTR LTR Gypsy 1 214 -1 1 752 230 0 0 0 chrUextra 22015152 22015177 -6989479 + R1_DM LINE R1 2422 2446 -2910 1 752 4448 29 0 0 chrUextra 22015277 22015800 -6988856 + R1_DM LINE R1 2620 3142 -2214 1 752 1205 22 0 0 chrUextra 22015803 22015941 -6988715 + R1_DM LINE R1 3275 3412 -1944 1 752 4706 49 60 0 chrUextra 22016041 22016655 -6988001 - PROTOP DNA P -3829 651 1 1 752 384 123 0 17 chrUextra 22016655 22016705 -6987951 + Invader1_I LTR Gypsy 1899 1947 -1239 1 752 6011 0 1 0 chrUextra 22016805 22017469 -6987187 - R1_DM LINE R1 -2185 3171 2507 1 752 1007 30 0 7 chrUextra 22018333 22018469 -6986187 + NTS_DM Other Other 67 201 -39 1 752 936 9 0 27 chrUextra 22018521 22018633 -6986023 + NTS_DM Other Other 25 133 -107 1 752 1350 18 0 6 chrUextra 22018633 22018798 -6985858 + NTS_DM Other Other 38 201 -39 1 752 21 57 0 0 chrUextra 22018798 22018833 -6985823 + AT_rich Low_complexity Low_complexity 1 35 0 1 752 898 9 9 27 chrUextra 22018859 22018970 -6985686 + NTS_DM Other Other 25 133 -107 1 752 249 0 0 0 chrUextra 22018970 22018997 -6985659 + NTS_DM Other Other 38 64 -176 1 752 826 10 0 30 chrUextra 22019861 22019960 -6984696 - NTS_DM Other Other -120 120 25 1 752 22 56 0 0 chrUextra 22019986 22020022 -6984634 + AT_rich Low_complexity Low_complexity 1 36 0 1 752 278 176 0 19 chrUextra 22020035 22020087 -6984569 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 753 268 196 0 19 chrUextra 22020119 22020171 -6984485 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 753 268 196 0 19 chrUextra 22020211 22020263 -6984393 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 753 268 196 0 19 chrUextra 22020303 22020355 -6984301 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 753 639 0 0 0 chrUextra 22020456 22020525 -6984131 - LSU-rRNA_Dme rRNA rRNA 0 3900 3832 1 753 659 0 0 0 chrUextra 22021389 22021459 -6983197 - NTS_DM Other Other -170 70 1 1 753 1917 8 17 21 chrUextra 22021459 22021700 -6982956 - NTS_DM Other Other 0 240 1 1 753 1810 30 21 17 chrUextra 22021700 22021939 -6982717 - NTS_DM Other Other 0 240 1 1 753 726 27 35 35 chrUextra 22021939 22022053 -6982603 - NTS_DM Other Other 0 240 127 1 753 231 171 0 0 chrUextra 22022154 22022195 -6982461 + DNAREP1_DM LINE Penelope 554 594 0 1 753 26 50 0 0 chrUextra 22022247 22022287 -6982369 + AT_rich Low_complexity Low_complexity 1 40 0 1 753 1499 28 0 6 chrUextra 22022917 22023099 -6981557 - NTS_DM Other Other -59 181 1 1 753 1899 17 17 17 chrUextra 22023099 22023339 -6981317 - NTS_DM Other Other 0 240 1 1 753 1506 25 20 20 chrUextra 22023339 22023542 -6981114 - NTS_DM Other Other 0 240 38 1 753 310 0 0 0 chrUextra 22023542 22023581 -6981075 - NTS_DM Other Other -107 133 95 1 753 27 29 0 0 chrUextra 22023710 22023744 -6980912 + AT_rich Low_complexity Low_complexity 1 34 0 1 753 21 0 0 0 chrUextra 22024260 22024281 -6980375 + AT_rich Low_complexity Low_complexity 1 21 0 1 753 252 86 0 0 chrUextra 22024306 22024341 -6980315 + NINJA_LTR LTR Pao 1 35 -282 1 753 6145 0 0 3 chrUextra 22024445 22025109 -6979547 + LSU-rRNA_Dme rRNA rRNA 2420 3081 -819 1 753 5963 11 0 0 chrUextra 22025209 22025873 -6978783 - R1_DM LINE R1 -3285 2071 1408 1 753 445 8 0 133 chrUextra 22026487 22026637 -6978019 + (CAAAAA)n Simple_repeat Simple_repeat 3 132 0 1 753 1970 42 0 0 chrUextra 22026737 22026975 -6977681 + PROTOP DNA P 139 376 -4104 1 753 2408 15 0 0 chrUextra 22026975 22027241 -6977415 - Invader2_LTR LTR Gypsy 0 266 1 1 753 1185 0 0 69 chrUextra 22027241 22027401 -6977255 - Invader2_I LTR Gypsy 0 4592 4444 1 753 2928 177 47 21 chrUextra 22027504 22028162 -6976494 + SAR_DM Satellite Satellite 280 954 -518 1 753 5295 42 1 23 chrUextra 22028265 22028929 -6975727 + BATUMI_I LTR Pao 1258 1907 -6056 1 753 1448 62 0 4 chrUextra 22029029 22029507 -6975149 + (ACATG)n Simple_repeat Simple_repeat 1 475 0 1 753 1550 6 0 6 chrUextra 22029513 22029693 -6974963 + (CAAGA)n Simple_repeat Simple_repeat 1 179 0 1 753 5730 24 0 1 chrUextra 22029793 22030457 -6974199 + DMRT1B LINE R1 2526 3188 -1995 1 753 4900 29 14 2 chrUextra 22030599 22031221 -6973435 - IDEFIX_I LTR Gypsy -71 5557 4928 1 753 5662 39 0 0 chrUextra 22031321 22031985 -6972671 + DIVER_I LTR Pao 3309 3972 -1671 1 753 5412 20 66 8 chrUextra 22032085 22032749 -6971907 - FW_DM LINE Jockey -173 4519 3817 1 753 1843 182 8 5 chrUextra 22032873 22033511 -6971145 - SAR_DM Satellite Satellite -558 640 1 1 753 369 304 39 60 chrUextra 22033614 22033848 -6970808 - Gypsy12_LTR LTR Gypsy -1429 907 679 1 753 882 229 20 61 chrUextra 22033942 22034189 -6970467 - Gypsy12_LTR LTR Gypsy -1803 533 297 1 753 389 22 0 0 chrUextra 22034232 22034277 -6970379 + PROTOP_B DNA P 1 45 -1108 1 753 4088 27 68 1 chrUextra 22034377 22035013 -6969643 - CIRCE LINE Composite -2916 3440 2763 1 753 387 0 0 0 chrUextra 22035141 22035184 -6969472 + (TTCTC)n Simple_repeat Simple_repeat 2 44 0 1 753 1620 0 0 0 chrUextra 22035191 22035443 -6969213 + (GAGAA)n Simple_repeat Simple_repeat 1 252 0 1 753 5966 9 0 0 chrUextra 22035905 22036569 -6968087 - R1_DM LINE R1 -2348 3008 2345 1 753 3435 10 5 0 chrUextra 22036669 22037056 -6967600 + R1_DM LINE R1 4968 5356 0 1 753 1360 85 16 0 chrUextra 22037089 22037278 -6967378 + R1_DM LINE R1 1 192 -5164 1 753 316 123 0 0 chrUextra 22037276 22037333 -6967323 + R1_DM LINE R1 593 649 -4707 1 753 5335 2 0 0 chrUextra 22037433 22038005 -6966651 + LSU-rRNA_Dme rRNA rRNA 2084 2655 -1245 1 753 886 0 0 10 chrUextra 22037998 22038097 -6966559 + R1_DM LINE R1 4800 4897 -459 1 753 3840 42 2 0 chrUextra 22038197 22038673 -6965983 - MAX_I LTR Pao -57 7857 7381 1 753 1043 40 0 7 chrUextra 22038710 22038861 -6965795 - MAX_I LTR Pao -538 7376 7227 1 753 4524 2 0 2 chrUextra 22038961 22039451 -6965205 - LSU-rRNA_Dme rRNA rRNA -1624 2276 1788 1 753 1083 15 8 8 chrUextra 22039492 22039624 -6965032 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1660 1 753 3777 5 0 2 chrUextra 22039725 22040142 -6964514 - R1_DM LINE R1 -3002 2354 1939 1 753 2381 4 0 0 chrUextra 22040134 22040389 -6964267 - LSU-rRNA_Dme rRNA rRNA -1246 2654 2400 1 753 6077 1 1 3 chrUextra 22040489 22041153 -6963503 + SSU-rRNA_Dme rRNA rRNA 868 1530 -465 1 753 6017 1 0 1 chrUextra 22041253 22041917 -6962739 + R1_DM LINE R1 1323 1985 -3371 1 753 1620 0 0 0 chrUextra 22042888 22043068 -6961588 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 753 299 177 31 10 chrUextra 22043068 22043165 -6961491 + CT-rich Low_complexity Low_complexity 2 100 0 1 753 545 144 49 12 chrUextra 22043201 22043363 -6961293 + CT-rich Low_complexity Low_complexity 5 172 0 1 753 192 0 125 0 chrUextra 22043397 22043445 -6961211 + (GA)n Simple_repeat Simple_repeat 2 55 0 1 753 2051 5 0 0 chrUextra 22043988 22044209 -6960447 - SSU-rRNA_Dme rRNA rRNA 0 1995 1775 1 753 4938 69 65 0 chrUextra 22044309 22044973 -6959683 - R1_DM LINE R1 -4624 732 26 1 753 3287 6 0 0 chrUextra 22045073 22045431 -6959225 + DMRT1B LINE R1 4826 5183 0 1 753 189 0 0 0 chrUextra 22045431 22045452 -6959204 + (A)n Simple_repeat Simple_repeat 1 21 0 1 753 2488 25 0 0 chrUextra 22045453 22045736 -6958920 - R1_DM LINE R1 -2785 2571 2289 1 753 1821 5 9 5 chrUextra 22045837 22046051 -6958605 + LSU-rRNA_Dme rRNA rRNA 1577 1791 -2109 1 753 3800 0 0 2 chrUextra 22046092 22046501 -6958155 + LSU-rRNA_Dme rRNA rRNA 1788 2195 -1705 1 753 682 120 0 0 chrUextra 22046601 22046709 -6957947 - ARS406_DM Unknown Unknown -245 108 1 1 753 3157 184 8 6 chrUextra 22046613 22047265 -6957391 + SAR_DM Satellite Satellite 192 844 -628 1 753 5780 29 0 0 chrUextra 22047365 22048029 -6956627 - R1_DM LINE R1 -3241 2115 1452 1 753 2949 197 14 22 chrUextra 22048129 22048791 -6955865 + SAR_DM Satellite Satellite 1 656 -203 1 753 1839 17 16 25 chrUextra 22048927 22049169 -6955487 + NTS_DM Other Other 1 240 0 1 753 1899 17 17 17 chrUextra 22049169 22049409 -6955247 + NTS_DM Other Other 1 240 0 1 753 1294 14 0 0 chrUextra 22049409 22049556 -6955100 + NTS_DM Other Other 1 147 -93 1 753 263 0 0 0 chrUextra 22049661 22049690 -6954966 + LSU-rRNA_Dme rRNA rRNA 3872 3900 0 1 753 268 196 0 19 chrUextra 22049791 22049843 -6954813 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 753 268 196 0 19 chrUextra 22049883 22049935 -6954721 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 753 268 196 0 19 chrUextra 22049975 22050027 -6954629 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 753 278 176 0 19 chrUextra 22050058 22050110 -6954546 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 753 22 56 0 0 chrUextra 22050123 22050159 -6954497 + AT_rich Low_complexity Low_complexity 1 36 0 1 753 936 9 0 27 chrUextra 22050185 22050297 -6954359 + NTS_DM Other Other 25 133 -107 1 753 293 174 70 102 chrUextra 22050595 22050723 -6953933 - BS LINE Jockey -4967 159 36 1 753 492 113 0 0 chrUextra 22050726 22050797 -6953859 + DMCR1A LINE CR1 2526 2596 -1874 1 753 1220 126 87 5 chrUextra 22050801 22051008 -6953648 + DMCR1A LINE CR1 2771 2994 -1476 1 753 493 157 12 0 chrUextra 22051002 22051085 -6953571 + DMCR1A LINE CR1 3247 3330 -1140 1 753 717 13 0 0 chrUextra 22051185 22051263 -6953393 - NTS_DM Other Other -162 78 1 1 753 1878 21 17 17 chrUextra 22051263 22051503 -6953153 - NTS_DM Other Other 0 240 1 1 753 1848 21 17 21 chrUextra 22051503 22051744 -6952912 - NTS_DM Other Other 0 240 1 1 753 686 20 38 38 chrUextra 22051744 22051849 -6952807 - NTS_DM Other Other 0 240 136 1 753 882 47 0 0 chrUextra 22051952 22052059 -6952597 + NTS_DM Other Other 27 133 -107 1 753 1350 18 0 6 chrUextra 22052059 22052224 -6952432 + NTS_DM Other Other 38 201 -39 1 753 936 9 0 27 chrUextra 22052276 22052388 -6952268 + NTS_DM Other Other 25 133 -107 1 753 1350 18 0 6 chrUextra 22052388 22052553 -6952103 + NTS_DM Other Other 38 201 -39 1 753 6188 0 0 1 chrUextra 22052713 22053377 -6951279 - LSU-rRNA_Dme rRNA rRNA -547 3353 2691 1 753 3241 179 9 8 chrUextra 22053477 22054141 -6950515 + SAR_DM Satellite Satellite 256 920 -552 1 753 749 117 55 0 chrUextra 22054243 22054371 -6950285 - ARS406_DM Unknown Unknown -218 135 1 1 753 2933 181 24 6 chrUextra 22054272 22054905 -6949751 + SAR_DM Satellite Satellite 180 823 -649 1 753 5708 26 5 0 chrUextra 22055005 22055669 -6948987 + R1_DM LINE R1 2368 3034 -2322 1 753 3534 24 35 0 chrUextra 22055769 22056195 -6948461 + R1_DM LINE R1 4626 5066 -290 1 753 984 44 0 0 chrUextra 22056192 22056306 -6948350 + R1_DM LINE R1 5243 5356 0 1 753 632 85 11 0 chrUextra 22056339 22056433 -6948223 + R1_DM LINE R1 1 95 -5261 1 753 2542 207 13 19 chrUextra 22056533 22057196 -6947460 - SAR_DM Satellite Satellite -670 658 1 1 753 1620 0 0 0 chrUextra 22057297 22057573 -6947083 + (CACAA)n Simple_repeat Simple_repeat 1 276 0 1 753 5599 0 1 5 chrUextra 22058061 22058725 -6945931 + R1_DM LINE R1 1081 1742 -3614 1 753 2074 183 12 9 chrUextra 22058825 22059489 -6945167 - SAR_DM Satellite Satellite -702 665 1 1 753 5497 21 1 1 chrUextra 22059589 22060253 -6944403 + DMCR1A LINE CR1 2440 3103 -1367 1 753 2792 174 27 14 chrUextra 22060353 22061017 -6943639 - SAR_DM Satellite Satellite -454 1018 346 1 753 5534 1 0 0 chrUextra 22061117 22061781 -6942875 + ROO_I LTR Pao 777 1440 -6816 1 753 4419 0 0 0 chrUextra 22061881 22062381 -6942275 - HOBO DNA hAT -2516 500 1 1 753 2637 0 3 3 chrUextra 22062645 22062961 -6941695 - BLASTOPIA_I LTR Gypsy -4165 316 1 1 753 2140 15 7 11 chrUextra 22062961 22063237 -6941419 - BLASTOPIA_LTR LTR Gypsy 0 275 1 1 753 592 0 14 0 chrUextra 22063237 22063309 -6941347 + LSU-rRNA_Dme rRNA rRNA 911 983 -2917 1 753 5639 11 0 0 chrUextra 22063409 22064073 -6940583 + DOC2_DM LINE Jockey 4001 4664 -129 1 753 4973 49 1 1 chrUextra 22064944 22065601 -6939055 + R1_DM LINE R1 614 1270 -4086 1 753 2735 167 15 40 chrUextra 22065705 22066361 -6938295 - SAR_DM Satellite Satellite -595 877 238 1 753 5790 0 3 0 chrUextra 22066466 22067129 -6937527 + LSU-rRNA_Dme rRNA rRNA 3035 3699 -201 1 753 2861 173 9 12 chrUextra 22067230 22067890 -6936766 + SAR_DM Satellite Satellite 301 958 -514 1 753 1334 25 19 29 chrUextra 22068012 22068217 -6936439 - NTS_DM Other Other 0 240 38 1 753 787 0 0 10 chrUextra 22068217 22068314 -6936342 - NTS_DM Other Other -107 133 38 1 753 789 19 9 36 chrUextra 22068314 22068426 -6936230 - NTS_DM Other Other -107 133 25 1 753 21 57 0 0 chrUextra 22068452 22068487 -6936169 + AT_rich Low_complexity Low_complexity 1 35 0 1 753 1174 31 6 6 chrUextra 22068487 22068651 -6936005 - NTS_DM Other Other -39 201 38 1 753 306 0 0 0 chrUextra 22068757 22068795 -6935861 + ARS406_DM Unknown Unknown 145 182 -171 1 753 2903 168 10 10 chrUextra 22068793 22069419 -6935237 - SAR_DM Satellite Satellite -478 994 369 1 753 1620 0 0 0 chrUextra 22069521 22069786 -6934870 + (CACAA)n Simple_repeat Simple_repeat 1 265 0 1 753 4604 108 0 0 chrUextra 22070285 22070949 -6933707 - HMSBEAGLE_I LTR Gypsy -2347 4182 3519 1 753 2853 182 11 9 chrUextra 22071049 22071713 -6932943 + SAR_DM Satellite Satellite 250 914 -558 1 753 562 184 23 40 chrUextra 22071813 22071988 -6932668 + Gypsy_LTR LTR Gypsy 260 431 -51 1 753 583 73 0 0 chrUextra 22072119 22072201 -6932455 + Jockey2 LINE Jockey 1 82 -3346 1 753 706 148 30 61 chrUextra 22072205 22072370 -6932286 + Gypsy5_LTR LTR Gypsy 77 236 -194 1 753 870 26 0 0 chrUextra 22072578 22072691 -6931965 - NTS_DM Other Other -90 150 38 1 753 817 0 0 0 chrUextra 22072691 22072787 -6931869 - NTS_DM Other Other -107 133 38 1 753 832 9 9 27 chrUextra 22072787 22072898 -6931758 - NTS_DM Other Other -107 133 25 1 753 21 57 0 0 chrUextra 22072924 22072959 -6931697 + AT_rich Low_complexity Low_complexity 1 35 0 1 753 1252 18 0 6 chrUextra 22072959 22073124 -6931532 - NTS_DM Other Other -39 201 38 1 753 791 9 18 27 chrUextra 22073124 22073234 -6931422 - NTS_DM Other Other -107 133 25 1 753 1244 171 20 27 chrUextra 22073344 22073639 -6931017 + SAR_DM Satellite Satellite 496 788 -684 1 753 1259 164 20 27 chrUextra 22073651 22073952 -6930704 + SAR_DM Satellite Satellite 496 794 -678 1 753 386 54 18 0 chrUextra 22073949 22074005 -6930651 - ARS406_DM Unknown Unknown -194 159 103 1 753 480 36 12 12 chrUextra 22074105 22074189 -6930467 + IDEFIX_LTR LTR Gypsy 511 594 0 1 753 405 55 19 0 chrUextra 22074189 22074261 -6930395 + MDG1_I LTR Gypsy 6543 6596 0 1 753 258 200 69 23 chrUextra 22074252 22074339 -6930317 + TABOR_LTR LTR Gypsy 1 91 -415 1 753 613 190 0 0 chrUextra 22074640 22074761 -6929895 + DMRT1B LINE R1 2589 2709 -2474 1 753 5762 6 0 0 chrUextra 22074869 22075533 -6929123 - Gypsy6_I LTR Gypsy -3419 3593 2930 1 753 2939 179 8 5 chrUextra 22075633 22076288 -6928368 - SAR_DM Satellite Satellite -598 874 218 1 753 2542 178 33 26 chrUextra 22076402 22077061 -6927595 - SAR_DM Satellite Satellite -569 903 240 1 753 3494 96 33 107 chrUextra 22077161 22077825 -6926831 - Gypsy12_I LTR Gypsy -3854 1692 1078 1 753 1737 47 172 0 chrUextra 22078280 22078535 -6926121 + PROTOP DNA P 1 299 -4181 1 753 414 45 45 0 chrUextra 22078522 22078589 -6926067 + PROTOP DNA P 522 591 -3889 1 753 5628 0 1 0 chrUextra 22078689 22079353 -6925303 - TRANSPAC_I LTR Gypsy -3698 892 228 1 753 5727 3 0 0 chrUextra 22079453 22080117 -6924539 + DMRT1B LINE R1 1558 2221 -2962 1 753 1620 5 0 0 chrUextra 22080253 22080460 -6924196 + (TTCTC)n Simple_repeat Simple_repeat 1 207 0 1 753 546 75 0 0 chrUextra 22080474 22080554 -6924102 + (GAGAA)n Simple_repeat Simple_repeat 1 80 0 1 753 897 173 102 15 chrUextra 22081064 22081269 -6923387 + DMLTR5 LTR Gypsy 44 266 0 1 753 351 49 65 16 chrUextra 22081268 22081330 -6923326 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 1 753 262 106 0 21 chrUextra 22081352 22081400 -6923256 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 753 5758 1 1 1 chrUextra 22081745 22082409 -6922247 + SSU-rRNA_Dme rRNA rRNA 1223 1886 -109 1 753 5724 1 1 3 chrUextra 22082509 22083173 -6921483 - SSU-rRNA_Dme rRNA rRNA -94 1901 1239 1 753 5801 1 0 0 chrUextra 22083273 22083937 -6920719 + SSU-rRNA_Dme rRNA rRNA 428 1091 -904 1 753 648 0 0 0 chrUextra 22084037 22084109 -6920547 + (GAGAA)n Simple_repeat Simple_repeat 2 73 0 1 753 5372 29 1 0 chrUextra 22085565 22086229 -6918427 - R1_DM LINE R1 -821 4535 3871 1 753 2968 163 14 12 chrUextra 22087097 22087757 -6916899 + SAR_DM Satellite Satellite 346 1006 -466 1 753 21 0 0 0 chrUextra 22088233 22088254 -6916402 + AT_rich Low_complexity Low_complexity 1 21 0 1 753 37 23 0 0 chrUextra 22088275 22088319 -6916337 + AT_rich Low_complexity Low_complexity 1 44 0 1 753 21 0 0 0 chrUextra 22088411 22088432 -6916224 + AT_rich Low_complexity Low_complexity 1 21 0 1 753 31 0 0 0 chrUextra 22088453 22088484 -6916172 + AT_rich Low_complexity Low_complexity 1 31 0 1 753 5335 14 1 1 chrUextra 22088621 22089285 -6915371 - DM176_I LTR Gypsy -3934 2486 1823 1 753 1632 268 43 45 chrUextra 22089397 22090049 -6914607 + MAX_I LTR Pao 6516 7166 -748 1 753 4564 27 5 60 chrUextra 22090149 22090813 -6913843 + BATUMI_I LTR Pao 2566 3192 -4771 1 753 1419 42 5 41 chrUextra 22090913 22091131 -6913525 - BATUMI_I LTR Pao -752 7211 7002 1 753 3735 5 0 5 chrUextra 22091131 22091577 -6913079 - BATUMI_I LTR Pao 0 7963 7520 1 753 5670 3 0 0 chrUextra 22091677 22092341 -6912315 - IDEFIX_I LTR Gypsy -3984 1644 981 1 753 2948 29 47 0 chrUextra 22092442 22092822 -6911834 - PROTOP DNA P -4082 398 1 1 753 2333 113 14 28 chrUextra 22093205 22093861 -6910795 + DMSAT6 Satellite Satellite 1 646 -141 1 753 4986 22 29 23 chrUextra 22093972 22094633 -6910023 + ROO_I LTR Pao 1516 2180 -6076 1 753 964 71 0 0 chrUextra 22094733 22094873 -6909783 + ARS406_DM Unknown Unknown 50 189 -164 1 753 2830 183 11 5 chrUextra 22094750 22095397 -6909259 - SAR_DM Satellite Satellite -535 937 287 1 753 2451 85 31 23 chrUextra 22095497 22096159 -6908497 - DMSAT6 Satellite Satellite -231 667 1 1 753 4812 76 0 14 chrUextra 22096261 22096925 -6907731 - Gypsy12_I LTR Gypsy -512 5034 4380 1 753 3085 162 9 11 chrUextra 22097789 22098452 -6906204 + SAR_DM Satellite Satellite 333 994 -478 1 753 2315 0 0 0 chrUextra 22098553 22098818 -6905838 + R2_DM LINE R2 3337 3601 -6 1 753 3498 5 0 0 chrUextra 22098814 22099217 -6905439 + LSU-rRNA_Dme rRNA rRNA 2578 2980 -920 1 753 324 0 0 0 chrUextra 22099318 22099357 -6905299 - ALUII_DM Unknown Unknown -201 39 1 1 753 21 57 0 0 chrUextra 22099357 22099392 -6905264 + AT_rich Low_complexity Low_complexity 1 35 0 1 753 22 35 0 0 chrUextra 22099589 22099618 -6905038 + AT_rich Low_complexity Low_complexity 1 29 0 1 753 37 39 0 0 chrUextra 22099700 22099751 -6904905 + AT_rich Low_complexity Low_complexity 1 51 0 1 753 5517 0 0 1 chrUextra 22100081 22100745 -6903911 + ROO_I LTR Pao 2837 3499 -4757 1 753 5501 21 0 0 chrUextra 22100847 22101509 -6903147 + ROO_I LTR Pao 2323 2984 -5272 1 753 2912 101 134 51 chrUextra 22101624 22102272 -6902384 - TART LINE telomeric -4301 10176 9475 1 753 5727 5 0 0 chrUextra 22102373 22103037 -6901619 - R1_DM LINE R1 -677 4679 4016 1 753 3909 106 143 3 chrUextra 22103137 22103801 -6900855 - Gypsy12_I LTR Gypsy -930 4616 3860 1 753 2992 167 11 9 chrUextra 22103908 22104565 -6900091 - SAR_DM Satellite Satellite -396 1076 419 1 753 5612 3 11 6 chrUextra 22105429 22106093 -6898563 - SSU-rRNA_Dme rRNA rRNA -1263 732 66 1 753 4120 24 2 12 chrUextra 22106193 22106711 -6897945 + DMRT1A LINE R1 4671 5183 0 1 753 3745 71 68 27 chrUextra 22108485 22109149 -6895507 - STALKER4_I LTR Gypsy -5038 1492 802 1 753 3018 171 6 11 chrUextra 22109249 22109903 -6894753 - SAR_DM Satellite Satellite -490 982 332 1 753 2848 183 26 8 chrUextra 22110016 22110676 -6893980 + SAR_DM Satellite Satellite 282 953 -519 1 753 969 138 39 22 chrUextra 22110873 22111102 -6893554 - NTS_DM Other Other 0 240 8 1 753 273 125 21 0 chrUextra 22111200 22111248 -6893408 - NTS_DM Other Other -191 49 1 1 753 817 130 19 6 chrUextra 22111279 22111441 -6893215 - NTS_DM Other Other -35 205 42 1 753 5391 23 15 1 chrUextra 22112305 22112969 -6891687 + Gypsy2_I LTR Gypsy 2472 3144 -2991 1 753 2324 88 23 33 chrUextra 22113069 22113733 -6890923 + DMSAT6 Satellite Satellite 1 656 -71 1 753 5715 1 0 3 chrUextra 22113833 22114497 -6890159 - LSU-rRNA_Dme rRNA rRNA -982 2918 2257 1 753 817 0 0 0 chrUextra 22114617 22114713 -6889943 - NTS_DM Other Other -107 133 38 1 753 802 9 9 36 chrUextra 22114713 22114825 -6889831 - NTS_DM Other Other -107 133 25 1 753 21 57 0 0 chrUextra 22114851 22114886 -6889770 + AT_rich Low_complexity Low_complexity 1 35 0 1 753 1252 18 0 6 chrUextra 22114886 22115051 -6889605 - NTS_DM Other Other -39 201 38 1 753 870 9 0 27 chrUextra 22115051 22115163 -6889493 - NTS_DM Other Other -107 133 25 1 753 344 22 0 0 chrUextra 22115215 22115260 -6889396 - NTS_DM Other Other -39 201 157 1 753 1536 21 0 5 chrUextra 22115361 22115551 -6889105 + MICROPIA_LTR LTR Gypsy 288 476 0 1 753 2674 47 29 88 chrUextra 22115555 22115999 -6888657 - MAX_I LTR Pao -7496 418 1 1 753 5656 1 3 0 chrUextra 22116126 22116789 -6887867 + LSU-rRNA_Dme rRNA rRNA 593 1257 -2643 1 753 2899 177 11 6 chrUextra 22116892 22117545 -6887111 + SAR_DM Satellite Satellite 282 937 -535 1 753 22 0 0 0 chrUextra 22117762 22117784 -6886872 + AT_rich Low_complexity Low_complexity 1 22 0 1 753 270 239 0 0 chrUextra 22118058 22118125 -6886531 + BS2 LINE Jockey 4148 4214 -507 1 753 365 304 60 60 chrUextra 22118430 22119001 -6885655 - BLASTOPIA_I LTR Gypsy -1859 3029 2180 1 753 5281 26 11 8 chrUextra 22119181 22119843 -6884813 - FW_DM LINE Jockey -1921 2771 2108 1 753 367 113 0 31 chrUextra 22119945 22120009 -6884647 + DMTOM1_LTR LTR Gypsy 349 410 0 1 753 388 100 14 28 chrUextra 22120009 22120072 -6884584 + DMTOM1_LTR LTR Gypsy 349 410 0 1 753 301 223 23 76 chrUextra 22120072 22120203 -6884453 + ROVER-I_DM LTR Gypsy 1 124 -6460 1 753 233 291 15 15 chrUextra 22120321 22120457 -6884199 + (TAAA)n Simple_repeat Simple_repeat 2 137 0 1 753 719 277 56 46 chrUextra 22120709 22121191 -6883465 + QUASIMODO_I LTR Gypsy 1199 1729 -4331 1 753 3068 171 8 8 chrUextra 22121476 22122137 -6882519 + SAR_DM Satellite Satellite 346 1006 -466 1 753 5505 6 1 0 chrUextra 22122237 22122901 -6881755 - STALKER4_I LTR Gypsy -1136 5394 4730 1 753 1729 184 19 7 chrUextra 22123001 22123416 -6881240 + SAR_DM Satellite Satellite 484 903 -569 1 753 1005 94 0 0 chrUextra 22123422 22123581 -6881075 - ARS406_DM Unknown Unknown -194 159 1 1 753 892 207 4 4 chrUextra 22123431 22123659 -6880997 + SAR_DM Satellite Satellite 496 723 -749 1 753 2822 171 19 8 chrUextra 22123765 22124409 -6880247 - SAR_DM Satellite Satellite -627 845 195 1 753 625 133 0 0 chrUextra 22124316 22124429 -6880227 + ARS406_DM Unknown Unknown 1 113 -240 1 753 5740 1 8 0 chrUextra 22124529 22125193 -6879463 + MAX_I LTR Pao 1229 1897 -6017 1 753 5489 15 0 0 chrUextra 22125293 22125957 -6878699 + STALKER4_I LTR Gypsy 4959 5622 -908 1 753 4912 29 0 0 chrUextra 22126057 22126679 -6877977 - IDEFIX_I LTR Gypsy -5006 622 1 1 753 5514 11 0 1 chrUextra 22126821 22127485 -6877171 + STALKER4_I LTR Gypsy 5147 5809 -721 1 753 5346 14 0 1 chrUextra 22127585 22128249 -6876407 - ROO_I LTR Pao -3070 5186 4524 1 753 2624 185 6 20 chrUextra 22128349 22128994 -6875662 + SAR_DM Satellite Satellite 483 1118 -354 1 753 371 214 0 10 chrUextra 22128909 22129013 -6875643 - XDMR_DM Unknown Unknown 0 360 258 1 753 21 0 0 0 chrUextra 22129139 22129160 -6875496 + AT_rich Low_complexity Low_complexity 1 21 0 1 753 21 0 0 0 chrUextra 22129272 22129293 -6875363 + AT_rich Low_complexity Low_complexity 1 21 0 1 753 4973 28 0 0 chrUextra 22129908 22130541 -6874115 + STALKER4_I LTR Gypsy 3114 3746 -2784 1 753 2456 16 3 13 chrUextra 22130641 22130955 -6873701 - DIVER2_I LTR Pao -94 4053 3743 1 753 1456 43 0 99 chrUextra 22130953 22131186 -6873470 - DIVER2_I LTR Pao -2572 1575 1366 1 753 1597 0 5 0 chrUextra 22131405 22131601 -6873055 - QUASIMODO_LTR LTR Gypsy -461 197 1 1 753 3638 6 0 0 chrUextra 22131601 22132069 -6872587 - QUASIMODO_I LTR Gypsy 0 6060 5593 1 753 4431 33 9 70 chrUextra 22132173 22132833 -6871823 + BATUMI_I LTR Pao 2566 3185 -4778 1 753 1481 0 6 0 chrUextra 22132933 22133107 -6871549 - DM1731_I LTR Copia -3801 175 1 1 753 2717 33 0 0 chrUextra 22133107 22133443 -6871213 - DM1731_LTR LTR Copia 0 336 1 1 753 21 0 0 0 chrUextra 22133458 22133479 -6871177 + AT_rich Low_complexity Low_complexity 1 21 0 1 753 291 83 0 59 chrUextra 22133481 22133532 -6871124 - PROTOP_B DNA P -1094 59 12 1 753 1642 0 0 0 chrUextra 22133697 22133884 -6870772 - QUASIMODO_I LTR Gypsy -5873 187 1 1 753 4147 2 0 0 chrUextra 22133884 22134361 -6870295 - QUASIMODO_LTR LTR Gypsy 0 658 182 1 753 5399 12 11 0 chrUextra 22134461 22134958 -6869698 - SSU-rRNA_Dme rRNA rRNA -1286 709 213 1 753 243 0 0 0 chrUextra 22134958 22134985 -6869671 + (TAA)n Simple_repeat Simple_repeat 1 27 0 1 753 5399 12 11 0 chrUextra 22134985 22135125 -6869531 - SSU-rRNA_Dme rRNA rRNA -1783 212 66 1 753 1158 126 0 0 chrUextra 22135225 22135542 -6869114 + (TA)n Simple_repeat Simple_repeat 1 317 0 1 753 2289 11 0 0 chrUextra 22135543 22135809 -6868847 - DMLTR5 LTR Gypsy 0 266 1 1 753 679 0 0 0 chrUextra 22135809 22135889 -6868767 - HMSBEAGLE_I LTR Gypsy 0 6529 6450 1 753 5561 15 0 1 chrUextra 22135989 22136653 -6868003 + DMRT1A LINE R1 3974 4636 -547 1 753 4205 6 0 2 chrUextra 22136753 22137247 -6867409 - DM1731_I LTR Copia -279 3697 3205 1 753 1380 0 31 0 chrUextra 22137254 22137417 -6867239 - DM1731_I LTR Copia -1109 2867 2700 1 753 5387 30 0 0 chrUextra 22137517 22138180 -6866476 - MAX_I LTR Pao -4522 3392 2730 1 753 671 77 19 0 chrUextra 22138283 22138387 -6866269 - SAR_DM Satellite Satellite -979 493 388 1 753 287 256 25 8 chrUextra 22138387 22138398 -6866258 + XDMR Unknown Unknown 224 340 -21 1 753 2262 175 15 15 chrUextra 22138398 22138943 -6865713 - SAR_DM Satellite Satellite -672 800 256 1 753 3144 164 8 8 chrUextra 22139043 22139706 -6864950 - SAR_DM Satellite Satellite -437 1035 373 1 753 2135 82 18 42 chrUextra 22139818 22140469 -6864187 + DMSAT6 Satellite Satellite 1 635 -3 1 753 5310 24 1 6 chrUextra 22140569 22141232 -6863424 - R1_DM LINE R1 -370 4986 4327 1 753 5562 18 0 0 chrUextra 22141334 22141995 -6862661 - R2_DM LINE R2 -356 3251 2591 1 753 5150 33 51 0 chrUextra 22142095 22142758 -6861898 + R1_DM LINE R1 2260 2956 -2400 1 753 5111 10 3 0 chrUextra 22142858 22143463 -6861193 - DOC2_DM LINE Jockey -2335 2458 1852 1 753 512 0 0 0 chrUextra 22143461 22143521 -6861135 - DOC2_DM LINE Jockey -870 3923 3864 1 753 2735 184 9 8 chrUextra 22143622 22144268 -6860388 - SAR_DM Satellite Satellite -634 838 192 1 753 664 99 9 0 chrUextra 22144173 22144284 -6860372 + ARS406_DM Unknown Unknown 2 113 -240 1 753 1092 54 437 0 chrUextra 22144384 22144631 -6860025 - R1_DM LINE R1 -3706 1650 1296 1 753 3018 58 2 7 chrUextra 22144631 22145047 -6859609 - R1_DM LINE R1 -4739 617 204 1 753 3228 191 3 8 chrUextra 22145152 22145810 -6858846 - ROVER-I_DM LTR Gypsy -3145 3439 2785 1 753 5654 1 1 5 chrUextra 22145910 22146573 -6858083 - LSU-rRNA_Dme rRNA rRNA -2391 1509 849 1 753 4520 0 0 0 chrUextra 22146811 22147336 -6857320 + FW_DM LINE Jockey 1528 2052 -2640 1 753 726 120 0 0 chrUextra 22147436 22147561 -6857095 - ARS406_DM Unknown Unknown -227 126 2 1 753 2741 187 5 6 chrUextra 22147469 22148099 -6856557 + SAR_DM Satellite Satellite 195 823 -649 1 753 5479 23 0 0 chrUextra 22148199 22148862 -6855794 - R1_DM LINE R1 -2574 2782 2120 1 753 2923 176 9 8 chrUextra 22148962 22149620 -6855036 + SAR_DM Satellite Satellite 418 1076 -396 1 753 2668 87 52 75 chrUextra 22149776 22150312 -6854344 + MAX_I LTR Pao 1 524 -7390 1 753 3000 24 38 54 chrUextra 22150488 22150935 -6853721 - Transib5 DNA Transib -2381 620 181 1 753 391 39 0 0 chrUextra 22150933 22150984 -6853672 - Transib5 DNA Transib -2946 55 5 1 753 417 40 0 0 chrUextra 22151077 22151151 -6853505 + PROTOP_B DNA P 571 644 -509 1 754 2109 84 97 6 chrUextra 22151251 22151612 -6853044 + DM297_I LTR Gypsy 5774 6167 0 1 754 267 160 0 0 chrUextra 22151612 22151662 -6852994 + DM297_LTR LTR Gypsy 1 50 -364 1 754 5605 21 0 0 chrUextra 22152014 22152677 -6851979 - MAX_I LTR Pao -3531 4383 3721 1 754 2892 171 12 11 chrUextra 22152777 22153438 -6851218 + SAR_DM Satellite Satellite 297 958 -514 1 754 1620 0 0 0 chrUextra 22153540 22153767 -6850889 + (GAGAA)n Simple_repeat Simple_repeat 1 227 0 1 754 590 154 9 0 chrUextra 22154309 22154419 -6850237 - MINOS DNA Tc1 -403 1372 1262 1 754 3893 42 8 6 chrUextra 22154433 22154955 -6849701 + TC1_DM DNA Tc1 1 523 -1143 1 754 824 25 0 8 chrUextra 22155066 22155188 -6849468 + NTS_DM Other Other 81 201 -39 1 754 21 57 0 0 chrUextra 22155188 22155223 -6849433 + AT_rich Low_complexity Low_complexity 1 35 0 1 754 832 9 9 27 chrUextra 22155249 22155360 -6849296 + NTS_DM Other Other 25 133 -107 1 754 817 0 0 0 chrUextra 22155360 22155456 -6849200 + NTS_DM Other Other 38 133 -107 1 754 1394 25 20 20 chrUextra 22155456 22155659 -6848997 + NTS_DM Other Other 38 240 0 1 754 571 14 14 0 chrUextra 22155659 22155729 -6848927 + NTS_DM Other Other 1 71 -169 1 754 5511 1 3 0 chrUextra 22155830 22156492 -6848164 - ROO_I LTR Pao -3261 4995 4332 1 754 2780 184 11 6 chrUextra 22156596 22157251 -6847405 + SAR_DM Satellite Satellite 246 903 -569 1 754 1301 24 0 6 chrUextra 22157355 22157524 -6847132 - NTS_DM Other Other -72 168 1 1 754 1734 21 17 17 chrUextra 22157524 22157764 -6846892 - NTS_DM Other Other 0 240 1 1 754 1387 25 20 20 chrUextra 22157764 22157967 -6846689 - NTS_DM Other Other 0 240 38 1 754 391 0 0 0 chrUextra 22157967 22158018 -6846638 - NTS_DM Other Other -107 133 83 1 754 4419 0 0 2 chrUextra 22158118 22158629 -6846027 + R1_DM LINE R1 4847 5356 0 1 754 1298 7 0 0 chrUextra 22158631 22158781 -6845875 + LSU-rRNA_Dme rRNA rRNA 2640 2789 -1111 1 754 5749 1 0 1 chrUextra 22158881 22159544 -6845112 - LSU-rRNA_Dme rRNA rRNA -1414 2486 1825 1 754 5519 24 0 1 chrUextra 22159644 22160307 -6844349 - Gypsy3_I LTR Gypsy -4794 1383 722 1 754 3138 18 8 5 chrUextra 22160407 22160806 -6843850 + IDEFIX_LTR LTR Gypsy 195 594 0 1 754 26 0 0 0 chrUextra 22160965 22160991 -6843665 + AT_rich Low_complexity Low_complexity 1 26 0 1 754 5646 1 0 1 chrUextra 22161170 22161833 -6842823 - R1_DM LINE R1 -2125 3231 2570 1 754 1411 96 64 0 chrUextra 22162250 22162468 -6842188 + DNAREP1_DM LINE Penelope 363 594 0 1 754 2264 122 16 19 chrUextra 22162721 22163359 -6841297 - DMSAT6 Satellite Satellite 0 636 1 1 754 5241 35 9 0 chrUextra 22163459 22164122 -6840534 - R1_DM LINE R1 -2117 3239 2571 1 754 3808 2 0 5 chrUextra 22164222 22164668 -6839988 - FW_DM LINE Jockey -4248 444 1 1 754 543 211 0 0 chrUextra 22164679 22164845 -6839811 + (AATAG)n Simple_repeat Simple_repeat 4 169 0 1 754 4486 8 0 2 chrUextra 22164985 22165507 -6839149 - SSU-rRNA_Dme rRNA rRNA -1474 521 1 1 754 365 0 22 0 chrUextra 22165603 22165648 -6839008 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 754 2498 80 40 8 chrUextra 22165748 22166410 -6838246 + DMSAT6 Satellite Satellite 1 683 -28 1 754 2979 165 29 9 chrUextra 22166511 22167173 -6837483 - SAR_DM Satellite Satellite -446 1026 352 1 754 713 284 37 24 chrUextra 22167274 22167734 -6836922 - IDEFIX_I LTR Gypsy -3709 1919 1643 1 754 5318 5 9 1 chrUextra 22168037 22168700 -6835956 + QUASIMODO_I LTR Gypsy 4177 4844 -1216 1 754 1930 0 0 0 chrUextra 22168840 22169062 -6835594 - LSU-rRNA_Dme rRNA rRNA -3678 222 1 1 754 21 95 0 0 chrUextra 22169074 22169137 -6835519 + AT_rich Low_complexity Low_complexity 1 63 0 1 754 34 24 0 0 chrUextra 22169350 22169391 -6835265 + AT_rich Low_complexity Low_complexity 1 41 0 1 754 624 94 0 0 chrUextra 22170120 22170226 -6834430 + (CATGT)n Simple_repeat Simple_repeat 4 109 0 1 754 4557 2 0 0 chrUextra 22171855 22172377 -6832279 - LSU-rRNA_Dme rRNA rRNA -1591 2309 1788 1 754 770 0 0 11 chrUextra 22172421 22172515 -6832141 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1696 1 754 5448 23 0 1 chrUextra 22172615 22173278 -6831378 + R1_DM LINE R1 3024 3685 -1671 1 754 4352 58 1 56 chrUextra 22173378 22174041 -6830615 + BATUMI_I LTR Pao 2386 3012 -4951 1 754 1434 10 46 5 chrUextra 22174141 22174335 -6830321 + Invader3_I LTR Gypsy 4687 4888 0 1 754 2377 7 42 0 chrUextra 22174335 22174621 -6830035 + Invader3_LTR LTR Gypsy 1 298 0 1 754 1620 0 0 5 chrUextra 22174904 22175122 -6829534 + (GAGAA)n Simple_repeat Simple_repeat 1 216 0 1 754 2807 178 8 11 chrUextra 22175667 22176320 -6828336 + SAR_DM Satellite Satellite 253 903 -569 1 754 1691 23 0 0 chrUextra 22176430 22176644 -6828012 + FW_DM LINE Jockey 4477 4690 -2 1 754 3477 38 7 2 chrUextra 22176645 22177093 -6827563 - R1_DM LINE R1 -3966 1390 941 1 754 245 133 0 0 chrUextra 22177193 22177238 -6827418 - ARS406_DM Unknown Unknown -308 45 1 1 754 3076 170 6 6 chrUextra 22177198 22177856 -6826800 + SAR_DM Satellite Satellite 246 903 -569 1 754 601 311 67 49 chrUextra 22177960 22178618 -6826038 + MDG1_I LTR Gypsy 2048 2717 -3879 1 754 1620 0 0 2 chrUextra 22178739 22179175 -6825481 + (TTCTC)n Simple_repeat Simple_repeat 1 434 0 1 754 1194 87 0 0 chrUextra 22179181 22179354 -6825302 + (TTTTC)n Simple_repeat Simple_repeat 4 176 0 1 754 192 40 0 0 chrUextra 22179357 22179382 -6825274 + (TTCTC)n Simple_repeat Simple_repeat 1 25 0 1 754 32 0 0 0 chrUextra 22179769 22179801 -6824855 + AT_rich Low_complexity Low_complexity 1 32 0 1 754 1830 5 0 0 chrUextra 22179933 22180145 -6824511 + SSU-rRNA_Dme rRNA rRNA 1 212 -1783 1 754 1212 77 0 0 chrUextra 22180247 22180416 -6824240 - MAX_I LTR Pao -7189 725 557 1 754 3676 2 0 0 chrUextra 22180484 22180908 -6823748 + NOMAD_LTR LTR Gypsy 1 424 -94 1 754 5684 1 0 1 chrUextra 22181008 22181671 -6822985 - DOC LINE Jockey -1458 3267 2606 1 754 2821 180 9 11 chrUextra 22181777 22182434 -6822222 - SAR_DM Satellite Satellite -396 1076 421 1 754 5759 0 0 0 chrUextra 22182534 22183197 -6821459 + R1_DM LINE R1 2057 2719 -2637 1 754 4218 2 0 2 chrUextra 22183297 22183785 -6820871 + LSU-rRNA_Dme rRNA rRNA 2163 2649 -1251 1 754 1463 12 0 0 chrUextra 22183787 22183960 -6820696 + R1_DM LINE R1 5039 5211 -145 1 754 21 89 0 0 chrUextra 22184405 22184461 -6820195 + AT_rich Low_complexity Low_complexity 1 56 0 1 754 2077 0 4 4 chrUextra 22184480 22184723 -6819933 - SSU-rRNA_Dme rRNA rRNA 0 1995 1753 1 754 612 130 0 0 chrUextra 22184823 22184923 -6819733 + ARS406_DM Unknown Unknown 94 193 -160 1 754 2064 110 89 82 chrUextra 22184927 22185077 -6819579 + FB4_DM DNA Tc1 173 321 -3768 1 754 199 0 31 31 chrUextra 22185077 22185109 -6819547 + (TTA)n Simple_repeat Simple_repeat 2 33 0 1 754 2064 110 89 82 chrUextra 22185109 22185484 -6819172 + FB4_DM DNA Tc1 322 702 -3387 1 754 2914 192 10 13 chrUextra 22185588 22186210 -6818446 + Gypsy5_I LTR Gypsy 3278 3897 -2612 1 754 3345 196 0 0 chrUextra 22187112 22187770 -6816886 + ROVER-I_DM LTR Gypsy 3444 4101 -2483 1 754 5671 0 1 0 chrUextra 22187875 22188538 -6816118 + DOC LINE Jockey 854 1517 -3208 1 754 4637 24 0 0 chrUextra 22188638 22189223 -6815433 - ROO_I LTR Pao -1227 7029 6445 1 754 338 24 0 0 chrUextra 22189218 22189259 -6815397 - ROO_I LTR Pao -1994 6262 6222 1 754 387 0 0 0 chrUextra 22189256 22189301 -6815355 - ROO_I LTR Pao -2252 6004 5960 1 754 5708 1 1 3 chrUextra 22189401 22190064 -6814592 - SSU-rRNA_Dme rRNA rRNA -253 1742 1081 1 754 4068 21 63 1 chrUextra 22190164 22190827 -6813829 - R1_DM LINE R1 -1407 3949 3246 1 754 4260 2 0 0 chrUextra 22190927 22191414 -6813242 + R2_DM LINE R2 3117 3603 -4 1 754 930 18 0 0 chrUextra 22191410 22191519 -6813137 + LSU-rRNA_Dme rRNA rRNA 2578 2686 -1214 1 754 599 0 0 0 chrUextra 22191516 22191590 -6813066 + R1_DM LINE R1 852 925 -4431 1 754 2299 78 27 9 chrUextra 22191690 22192024 -6812632 + QUASIMODO_LTR LTR Gypsy 319 658 0 1 754 2606 172 20 31 chrUextra 22192463 22193116 -6811540 + SAR_DM Satellite Satellite 191 836 -636 1 754 5229 42 0 5 chrUextra 22193216 22193879 -6810777 + BATUMI_I LTR Pao 4486 5145 -2818 1 754 878 109 9 19 chrUextra 22193979 22194641 -6810015 + RSP Satellite Satellite 1 655 0 1 754 5370 1 1 5 chrUextra 22194742 22195405 -6809251 + ROO_I LTR Pao 2857 3517 -4739 1 754 1158 122 0 0 chrUextra 22197031 22197523 -6807133 + (TA)n Simple_repeat Simple_repeat 1 492 0 1 754 1348 35 6 0 chrUextra 22197523 22197694 -6806962 - DMLTR5 LTR Gypsy 0 266 95 1 754 862 28 0 0 chrUextra 22198572 22198680 -6805976 + NTS_DM Other Other 26 133 -107 1 754 1252 18 0 6 chrUextra 22198680 22198845 -6805811 + NTS_DM Other Other 38 201 -39 1 754 870 9 0 27 chrUextra 22198897 22199009 -6805647 + NTS_DM Other Other 25 133 -107 1 754 1232 24 0 6 chrUextra 22199009 22199174 -6805482 + NTS_DM Other Other 38 201 -39 1 754 2688 179 12 25 chrUextra 22199331 22199983 -6804673 - SAR_DM Satellite Satellite -371 1101 458 1 754 2702 55 47 7 chrUextra 22200083 22200490 -6804166 - DOC5_DM LINE Jockey -2841 1841 1419 1 754 618 102 8 25 chrUextra 22200491 22200612 -6804044 - DOC5_DM LINE Jockey -3976 706 588 1 754 598 50 252 0 chrUextra 22200611 22200746 -6803910 - DOC5_DM LINE Jockey -4327 355 187 1 754 1731 21 17 17 chrUextra 22200846 22201086 -6803570 - NTS_DM Other Other 0 240 1 1 754 1759 17 17 17 chrUextra 22201086 22201326 -6803330 - NTS_DM Other Other 0 240 1 1 754 1282 11 22 16 chrUextra 22201326 22201509 -6803147 - NTS_DM Other Other 0 240 57 1 754 1874 5 0 0 chrUextra 22201609 22201832 -6802824 - FW_DM LINE Jockey -1870 2822 2600 1 754 3667 14 2 0 chrUextra 22201831 22202270 -6802386 - FW_DM LINE Jockey -2499 2193 1754 1 754 1837 13 0 32 chrUextra 22202372 22202618 -6802038 + G_DM LINE Jockey 4109 4346 0 1 754 235 186 0 0 chrUextra 22202699 22202742 -6801914 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2578 1 754 246 150 0 0 chrUextra 22202791 22202831 -6801825 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 754 226 103 25 25 chrUextra 22202883 22202923 -6801733 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 754 306 26 0 0 chrUextra 22202996 22203035 -6801621 + G_DM LINE Jockey 1 39 -4307 1 754 704 0 35 0 chrUextra 22203712 22203798 -6800858 + (TTCTC)n Simple_repeat Simple_repeat 2 90 0 1 754 5819 1 0 0 chrUextra 22203898 22204561 -6800095 - SSU-rRNA_Dme rRNA rRNA -1082 913 251 1 754 5046 17 119 0 chrUextra 22204661 22205324 -6799332 - STALKER4_I LTR Gypsy -2431 4099 3358 1 754 245 54 0 0 chrUextra 22205427 22205464 -6799192 + ARS406_DM Unknown Unknown 35 71 -282 1 754 2602 171 19 15 chrUextra 22205471 22206087 -6798569 - SAR_DM Satellite Satellite -416 1056 438 1 754 5550 9 0 0 chrUextra 22206187 22206850 -6797806 - STALKER4_I LTR Gypsy -585 5945 5283 1 754 565 15 0 0 chrUextra 22206950 22207017 -6797639 - ROO_I LTR Pao -8189 67 1 1 754 3738 5 0 0 chrUextra 22207017 22207445 -6797211 - ROO_LTR LTR Pao 0 428 1 1 754 5478 12 0 0 chrUextra 22207713 22208376 -6796280 - STALKER4_I LTR Gypsy -770 5760 5098 1 754 4181 15 5 103 chrUextra 22208476 22209139 -6795517 + DM176_I LTR Gypsy 273 870 -5550 1 754 3693 126 18 8 chrUextra 22209239 22209902 -6794754 + TART LINE telomeric 8973 9642 -4835 1 754 3871 36 0 6 chrUextra 22210002 22210503 -6794153 + BATUMI_I LTR Pao 7466 7963 0 1 754 977 62 24 22 chrUextra 22210503 22210665 -6793991 + BATUMI_LTR LTR Pao 35 169 -103 1 754 5693 1 0 0 chrUextra 22210765 22211428 -6793228 + QUASIMODO_I LTR Gypsy 2079 2741 -3319 1 754 945 34 0 0 chrUextra 22211528 22211646 -6793010 - MICROPIA_LTR LTR Gypsy -266 210 93 1 754 1652 0 783 0 chrUextra 22211649 22211709 -6792947 + ACCORD2_I LTR Gypsy 1081 1187 -6025 1 754 222 105 0 0 chrUextra 22211709 22211747 -6792909 + (TAA)n Simple_repeat Simple_repeat 2 39 0 1 754 1652 110 244 27 chrUextra 22211747 22212191 -6792465 + ACCORD2_I LTR Gypsy 1188 1730 -5482 1 754 5746 0 0 0 chrUextra 22212291 22212954 -6791702 - ROO_I LTR Pao -6428 1828 1166 1 754 5646 1 1 5 chrUextra 22213054 22213717 -6790939 - SSU-rRNA_Dme rRNA rRNA -524 1471 811 1 754 4517 5 170 5 chrUextra 22213817 22214480 -6790176 + MDG1_I LTR Gypsy 5812 6584 -12 1 754 4546 32 5 57 chrUextra 22214580 22215243 -6789413 - BATUMI_I LTR Pao -4996 2967 2340 1 754 2288 189 55 14 chrUextra 22215343 22215997 -6788659 + TART LINE telomeric 8952 9551 -4926 1 754 1718 25 17 17 chrUextra 22216141 22216381 -6788275 + NTS_DM Other Other 1 240 0 1 754 1759 17 17 17 chrUextra 22216381 22216621 -6788035 + NTS_DM Other Other 1 240 0 1 754 1204 14 0 0 chrUextra 22216621 22216768 -6787888 + NTS_DM Other Other 1 147 -93 1 754 5457 20 0 6 chrUextra 22216869 22217531 -6787125 + FW_DM LINE Jockey 3649 4306 -386 1 754 2750 183 8 9 chrUextra 22217632 22218272 -6786384 + SAR_DM Satellite Satellite 438 1076 -396 1 754 4057 0 0 48 chrUextra 22218395 22218911 -6785745 - LSU-rRNA_Dme rRNA rRNA -3409 491 1 1 754 21 95 0 0 chrUextra 22218923 22218986 -6785670 + AT_rich Low_complexity Low_complexity 1 63 0 1 754 5418 11 1 1 chrUextra 22219171 22219821 -6784835 + R1_DM LINE R1 3708 4357 -999 1 754 4782 2 0 0 chrUextra 22220036 22220584 -6784072 + DOC LINE Jockey 4 551 -4174 1 754 4272 15 69 0 chrUextra 22220684 22221347 -6783309 + DMRT1B LINE R1 2079 2787 -2396 1 754 935 142 17 11 chrUextra 22221447 22221625 -6783031 + HETA LINE telomeric 5301 5479 -602 1 754 2641 134 8 14 chrUextra 22221623 22222109 -6782547 + HETA LINE telomeric 3455 3937 -2144 1 754 513 288 16 16 chrUextra 22222362 22222609 -6782047 - TV1I LTR Gypsy -5005 958 712 1 754 5371 6 15 0 chrUextra 22222973 22223636 -6781020 + QUASIMODO_I LTR Gypsy 3818 4490 -1570 1 754 5685 5 0 1 chrUextra 22223736 22224399 -6780257 + R1_DM LINE R1 4275 4936 -420 1 754 21 0 0 0 chrUextra 22225653 22225674 -6778982 + AT_rich Low_complexity Low_complexity 1 21 0 1 754 2300 56 0 75 chrUextra 22226177 22226523 -6778133 + CIRCE LINE Composite 973 1292 -5064 1 754 382 338 22 22 chrUextra 22226464 22226589 -6778067 + Gypsy12_I LTR Gypsy 3088 3311 -2235 1 754 550 36 0 162 chrUextra 22226589 22226688 -6777968 + CIRCE LINE Composite 1305 1387 -4969 1 754 5581 3 0 0 chrUextra 22226788 22227451 -6777205 + G_DM LINE Jockey 2046 2708 -1638 1 754 2297 170 137 9 chrUextra 22227551 22228214 -6776442 - HETA LINE telomeric -812 5269 4522 1 754 1485 0 0 0 chrUextra 22228314 22228487 -6776169 - HMSBEAGLE_I LTR Gypsy -6356 173 1 1 754 2316 8 0 0 chrUextra 22228486 22228752 -6775904 - DMLTR5 LTR Gypsy 0 266 1 1 754 564 4 128 4 chrUextra 22228752 22228977 -6775679 + (TA)n Simple_repeat Simple_repeat 1 252 0 1 754 3389 0 0 0 chrUextra 22229077 22229463 -6775193 + LSU-rRNA_Dme rRNA rRNA 3515 3900 0 1 754 22 56 0 0 chrUextra 22229535 22229571 -6775085 + AT_rich Low_complexity Low_complexity 1 36 0 1 754 246 150 0 0 chrUextra 22229576 22229616 -6775040 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 754 246 150 0 0 chrUextra 22229668 22229708 -6774948 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 754 31 0 0 0 chrUextra 22229840 22229871 -6774785 + AT_rich Low_complexity Low_complexity 1 31 0 1 754 22 35 0 0 chrUextra 22230164 22230193 -6774463 + AT_rich Low_complexity Low_complexity 1 29 0 1 754 51 31 0 0 chrUextra 22230368 22230433 -6774223 + AT_rich Low_complexity Low_complexity 1 65 0 1 754 2933 174 8 12 chrUextra 22230603 22231250 -6773406 + SAR_DM Satellite Satellite 433 1076 -396 1 754 5401 23 0 0 chrUextra 22231366 22232029 -6772627 + ROO_I LTR Pao 5690 6352 -1904 1 754 766 22 0 0 chrUextra 22232129 22232220 -6772436 + R1_DM LINE R1 5266 5356 0 1 754 4928 12 0 0 chrUextra 22232218 22232792 -6771864 + LSU-rRNA_Dme rRNA rRNA 2640 3213 -687 1 754 2705 166 57 21 chrUextra 22233655 22234318 -6770338 + TART LINE telomeric 8957 9643 -4834 1 754 5563 6 1 1 chrUextra 22234418 22235081 -6769575 - R1_DM LINE R1 -1315 4041 3379 1 754 3388 24 115 1 chrUextra 22235944 22236606 -6768050 - R1_DM LINE R1 -1407 3949 3213 1 754 5523 11 1 1 chrUextra 22236707 22237370 -6767286 - R1_DM LINE R1 -1062 4294 3632 1 754 2675 134 34 8 chrUextra 22237472 22237976 -6766680 - Stalker2_I LTR Gypsy -6644 758 242 1 754 5483 15 1 12 chrUextra 22238233 22238896 -6765760 - Gypsy12_I LTR Gypsy -515 5031 4376 1 754 2831 193 6 5 chrUextra 22238998 22239659 -6764997 + SAR_DM Satellite Satellite 272 933 -539 1 754 5248 30 0 5 chrUextra 22239759 22240422 -6764234 + STALKER4_I LTR Gypsy 4377 5036 -1494 1 754 5012 53 15 3 chrUextra 22240522 22241185 -6763471 - R1_DM LINE R1 -3753 1603 933 1 754 5658 0 5 3 chrUextra 22241286 22241948 -6762708 - SSU-rRNA_Dme rRNA rRNA -217 1778 1116 1 754 5457 21 0 0 chrUextra 22242048 22242711 -6761945 - R1_DM LINE R1 -2574 2782 2120 1 754 618 112 9 0 chrUextra 22242812 22242919 -6761737 - ARS406_DM Unknown Unknown -245 108 1 1 754 2515 179 8 8 chrUextra 22242827 22243474 -6761182 + SAR_DM Satellite Satellite 1 646 -677 1 754 2188 26 0 4 chrUextra 22243574 22243841 -6760815 + ROO_LTR LTR Pao 163 428 0 1 754 2414 57 6 33 chrUextra 22243874 22244237 -6760419 + ROO_I LTR Pao 114 466 -7790 1 754 2653 3 0 0 chrUextra 22244337 22244644 -6760012 + LSU-rRNA_Dme rRNA rRNA 2242 2548 -1352 1 754 3111 3 0 3 chrUextra 22244641 22245000 -6759656 + R2_DM LINE R2 4 361 -3246 1 754 5168 26 0 0 chrUextra 22245863 22246526 -6758130 - ACCORD2_I LTR Gypsy -368 6844 6182 1 754 5456 12 1 3 chrUextra 22246626 22247289 -6757367 - R1_DM LINE R1 -1081 4275 3614 1 754 2914 175 21 9 chrUextra 22247389 22248051 -6756605 - SAR_DM Satellite Satellite -471 1001 332 1 754 4406 14 119 1 chrUextra 22248152 22248815 -6755841 + R1_DM LINE R1 3528 4268 -1088 1 754 1176 0 0 0 chrUextra 22248930 22249065 -6755591 - 5S_DM RNA RNA 0 135 1 1 754 1167 7 0 0 chrUextra 22249296 22249431 -6755225 - 5S_DM RNA RNA 0 135 1 1 754 2239 127 16 30 chrUextra 22249683 22250341 -6754315 + DMSAT6 Satellite Satellite 1 648 0 1 754 1726 17 17 21 chrUextra 22250442 22250683 -6753973 - NTS_DM Other Other 0 240 1 1 754 1744 21 17 17 chrUextra 22250683 22250923 -6753733 - NTS_DM Other Other 0 240 1 1 754 1196 17 22 22 chrUextra 22250923 22251104 -6753552 - NTS_DM Other Other 0 240 60 1 754 2902 172 12 9 chrUextra 22251210 22251867 -6752789 + SAR_DM Satellite Satellite 326 984 -488 1 754 2897 181 9 9 chrUextra 22251967 22252630 -6752026 + SAR_DM Satellite Satellite 267 929 -543 1 754 844 92 8 0 chrUextra 22252730 22252860 -6751796 - R1_DM LINE R1 -5225 131 1 1 754 4043 24 8 2 chrUextra 22252895 22253393 -6751263 - R1_DM LINE R1 -2 5354 4854 1 754 2814 183 8 11 chrUextra 22253493 22254156 -6750500 + SAR_DM Satellite Satellite 298 958 -514 1 754 5366 9 1 0 chrUextra 22254256 22254919 -6749737 + DM176_I LTR Gypsy 5287 5950 -470 1 754 2901 177 14 9 chrUextra 22255019 22255682 -6748974 - SAR_DM Satellite Satellite -399 1073 408 1 754 3093 166 11 9 chrUextra 22255783 22256445 -6748211 + SAR_DM Satellite Satellite 371 1033 -439 1 754 2493 10 0 0 chrUextra 22256545 22256842 -6747814 + DM176_LTR LTR Gypsy 211 507 0 1 754 2789 19 77 0 chrUextra 22256842 22257208 -6747448 + DM176_I LTR Gypsy 1 394 -6026 1 754 2896 187 6 6 chrUextra 22257308 22257964 -6746692 + SAR_DM Satellite Satellite 248 903 -569 1 754 258 333 0 0 chrUextra 22258077 22258242 -6746414 - ROVER-I_DM LTR Gypsy -3844 2740 2576 1 754 1363 12 6 6 chrUextra 22258220 22258388 -6746268 + TLD3 Unknown Unknown 2 169 -3 1 754 470 284 28 28 chrUextra 22258360 22258650 -6746006 - DM176_I LTR Gypsy -4292 2128 1839 1 754 5146 2 0 2 chrUextra 22258901 22259497 -6745159 + POGO DNA Pogo 1 595 -1526 1 754 2423 86 9 25 chrUextra 22259597 22260233 -6744423 + DMSAT6 Satellite Satellite 1 625 -279 1 754 2503 118 72 12 chrUextra 22260365 22260944 -6743712 + DMRT1B LINE R1 4570 5183 0 1 754 3215 115 11 11 chrUextra 22261123 22261786 -6742870 - BATUMI_I LTR Pao -3014 4900 4218 1 754 2389 173 64 14 chrUextra 22261886 22262548 -6742108 + SAR_DM Satellite Satellite 1 695 -208 1 754 5730 0 0 0 chrUextra 22262649 22263312 -6741344 - R1_DM LINE R1 -2332 3024 2362 1 754 3035 166 9 9 chrUextra 22263418 22264075 -6740581 - SAR_DM Satellite Satellite -425 1047 391 1 754 2981 179 9 6 chrUextra 22264175 22264838 -6739818 + SAR_DM Satellite Satellite 249 913 -559 1 754 2507 133 16 7 chrUextra 22264942 22265601 -6739055 + G2_DM LINE Jockey 4 317 -2785 1 754 260 0 0 0 chrUextra 22265701 22265754 -6738902 + DOC LINE Jockey 4672 4724 -1 1 754 5240 5 0 0 chrUextra 22265753 22266364 -6738292 - FW_DM LINE Jockey -3633 1059 449 1 754 822 0 0 0 chrUextra 22266464 22266558 -6738098 - SSU-rRNA_Dme rRNA rRNA -1901 94 1 1 754 32 0 0 0 chrUextra 22266690 22266722 -6737934 + AT_rich Low_complexity Low_complexity 1 32 0 1 754 28 48 0 0 chrUextra 22267051 22267093 -6737563 + AT_rich Low_complexity Low_complexity 1 42 0 1 754 4508 106 0 1 chrUextra 22267227 22267890 -6736766 + Gypsy_I LTR Gypsy 5591 6252 -255 1 754 2723 188 12 11 chrUextra 22267996 22268653 -6736003 - SAR_DM Satellite Satellite -562 910 253 1 754 5442 27 0 0 chrUextra 22268753 22269416 -6735240 - R1_DM LINE R1 -550 4806 4144 1 754 5624 1 1 0 chrUextra 22269516 22270162 -6734494 - LSU-rRNA_Dme rRNA rRNA -614 3286 2640 1 754 4881 3 3 0 chrUextra 22270282 22270847 -6733809 + LSU-rRNA_Dme rRNA rRNA 2093 2659 -1241 1 754 850 10 0 0 chrUextra 22270844 22270942 -6733714 + R1_DM LINE R1 4803 4900 -456 1 754 2750 163 19 10 chrUextra 22271044 22271704 -6732952 - SAR_DM Satellite Satellite -435 665 1 1 754 2873 179 24 8 chrUextra 22271805 22272468 -6732188 - SAR_DM Satellite Satellite -550 922 249 1 754 1322 16 26 21 chrUextra 22272568 22272762 -6731894 + NTS_DM Other Other 46 240 0 1 754 1738 21 17 17 chrUextra 22272762 22273002 -6731654 + NTS_DM Other Other 1 240 0 1 754 1741 9 18 13 chrUextra 22273002 22273231 -6731425 + NTS_DM Other Other 1 230 -10 1 754 1530 16 6 0 chrUextra 22273331 22273513 -6731143 + R1_DM LINE R1 5174 5356 0 1 754 3119 69 56 0 chrUextra 22273546 22273994 -6730662 + R1_DM LINE R1 1 473 -4883 1 754 192 40 0 0 chrUextra 22274236 22274261 -6730395 + (TTA)n Simple_repeat Simple_repeat 3 27 0 1 754 238 204 61 12 chrUextra 22274261 22274425 -6730231 + (TATAA)n Simple_repeat Simple_repeat 4 175 0 1 754 292 0 0 0 chrUextra 22274425 22274717 -6729939 + AT_rich Low_complexity Low_complexity 1 292 0 1 754 347 98 0 0 chrUextra 22274857 22274908 -6729748 - DM297_LTR LTR Gypsy -363 51 1 1 754 3710 68 33 11 chrUextra 22274908 22275518 -6729138 - DM297_I LTR Gypsy 0 6167 5545 1 754 5608 5 0 0 chrUextra 22275618 22276280 -6728376 - ROO_I LTR Pao -1103 7153 6492 1 754 21 0 0 0 chrUextra 22276476 22276497 -6728159 + AT_rich Low_complexity Low_complexity 1 21 0 1 754 2414 184 32 28 chrUextra 22277142 22277795 -6726861 + SAR_DM Satellite Satellite 477 1132 -340 1 754 818 36 135 0 chrUextra 22277904 22278015 -6726641 - PROTOP_B DNA P -1027 126 1 1 754 1653 5 14 24 chrUextra 22278357 22278566 -6726090 - DM1731_I LTR Copia -52 3924 3718 1 754 2543 188 8 23 chrUextra 22278670 22279313 -6725343 + SAR_DM Satellite Satellite 481 1113 -359 1 754 296 213 0 21 chrUextra 22279232 22279328 -6725328 - XDMR_DM Unknown Unknown 0 360 267 1 754 946 61 3 17 chrUextra 22279432 22280064 -6724592 + RSP Satellite Satellite 1 623 0 1 754 538 179 0 8 chrUextra 22280190 22280308 -6724348 - ARS406_DM Unknown Unknown -236 117 1 1 754 2212 203 57 9 chrUextra 22280210 22280846 -6723810 + SAR_DM Satellite Satellite 191 856 -616 1 754 2258 109 14 14 chrUextra 22280954 22281613 -6723043 + DMSAT6 Satellite Satellite 1 659 -273 1 94 4980 45 0 5 chrUextra 22281714 22282355 -6722301 - BATUMI_I LTR Pao -3011 4952 4315 1 755 2724 180 8 11 chrUextra 22282476 22283112 -6721544 - SAR_DM Satellite Satellite -647 825 192 1 755 781 90 0 8 chrUextra 22283015 22283138 -6721518 + ARS406_DM Unknown Unknown 1 122 -231 1 755 5365 2 20 0 chrUextra 22283239 22283881 -6720775 - ROO_I LTR Pao -1540 6716 6062 1 755 2850 182 6 8 chrUextra 22284010 22284662 -6719994 - SAR_DM Satellite Satellite -569 903 253 1 755 692 12 0 0 chrUextra 22284764 22284844 -6719812 - LSU-rRNA_Dme rRNA rRNA -1181 2719 2640 1 755 3768 0 0 2 chrUextra 22284842 22285279 -6719377 - R1_DM LINE R1 0 5356 4921 1 755 1252 0 0 0 chrUextra 22285279 22285424 -6719232 - ROO_LTR LTR Pao 0 428 284 1 755 3173 157 9 9 chrUextra 22286286 22286948 -6717708 - SAR_DM Satellite Satellite -435 1037 376 1 755 2356 88 20 52 chrUextra 22287051 22287709 -6716947 + DMSAT6 Satellite Satellite 1 637 -74 1 755 844 10 0 0 chrUextra 22287810 22287911 -6716745 + NTS_DM Other Other 33 133 -107 1 755 1252 18 0 6 chrUextra 22287911 22288076 -6716580 + NTS_DM Other Other 38 201 -39 1 755 21 57 0 0 chrUextra 22288076 22288111 -6716545 + AT_rich Low_complexity Low_complexity 1 35 0 1 755 832 9 9 27 chrUextra 22288137 22288248 -6716408 + NTS_DM Other Other 25 133 -107 1 755 817 0 0 0 chrUextra 22288248 22288344 -6716312 + NTS_DM Other Other 38 133 -107 1 755 879 47 0 8 chrUextra 22288344 22288472 -6716184 + NTS_DM Other Other 38 164 -76 1 755 2721 0 0 6 chrUextra 22289334 22289656 -6715000 - ROO_I LTR Pao -7936 320 1 1 755 2657 6 0 0 chrUextra 22289669 22289996 -6714660 - ROO_I LTR Pao -7324 932 606 1 755 655 186 7 14 chrUextra 22290330 22290472 -6714184 + HETRP_DM Satellite Satellite 1529 1669 -203 1 755 282 29 0 0 chrUextra 22290602 22290637 -6714019 + (GA)n Simple_repeat Simple_repeat 2 36 0 1 755 511 193 16 16 chrUextra 22290637 22290758 -6713898 + HETRP_DM Satellite Satellite 1549 1669 -203 1 755 4852 53 32 6 chrUextra 22290858 22291520 -6713136 - HETA LINE telomeric -92 5989 5311 1 755 5299 27 0 1 chrUextra 22291620 22292282 -6712374 - NINJA_I LTR Pao -138 5873 5213 1 755 1412 184 61 42 chrUextra 22292383 22292791 -6711865 - STALKER4_I LTR Gypsy -5230 1300 885 1 755 5444 15 6 1 chrUextra 22293908 22294568 -6710088 - R1_DM LINE R1 -1073 4283 3621 1 755 2729 63 55 0 chrUextra 22294668 22295047 -6709609 + TART LINE telomeric 1460 1859 -12618 1 755 2167 51 17 0 chrUextra 22295038 22295330 -6709326 + TART LINE telomeric 2045 2341 -12136 1 755 2881 170 9 11 chrUextra 22295431 22296085 -6708571 + SAR_DM Satellite Satellite 205 857 -615 1 755 347 60 20 0 chrUextra 22296042 22296092 -6708564 - ARS406_DM Unknown Unknown -164 189 139 1 755 4307 108 3 9 chrUextra 22296192 22296854 -6707802 - Gypsy12_I LTR Gypsy -2960 2586 1929 1 755 1456 168 3 7 chrUextra 22296954 22297253 -6707403 + SAR_DM Satellite Satellite 606 903 -569 1 755 3491 225 14 37 chrUextra 22297268 22298378 -6706278 + SAR_DM Satellite Satellite 1 1083 -628 1 755 5628 12 0 0 chrUextra 22298479 22299140 -6705516 - Gypsy4_I LTR Gypsy -3263 3025 2365 1 755 4500 99 3 5 chrUextra 22299240 22299900 -6704756 + Gypsy12_I LTR Gypsy 2097 2755 -2791 1 755 409 0 0 0 chrUextra 22300005 22300052 -6704604 + SSU-rRNA_Dme rRNA rRNA 1949 1995 0 1 755 21 89 0 0 chrUextra 22300071 22300127 -6704529 + AT_rich Low_complexity Low_complexity 1 56 0 1 755 227 178 0 0 chrUextra 22300766 22300811 -6703845 - ROVER-I_DM LTR Gypsy -5627 957 913 1 755 23 0 0 0 chrUextra 22300814 22300837 -6703819 + AT_rich Low_complexity Low_complexity 1 23 0 1 755 262 191 43 43 chrUextra 22300910 22301025 -6703631 + T-rich Low_complexity Low_complexity 3 117 0 1 755 208 286 8 31 chrUextra 22301208 22301338 -6703318 + (TTTA)n Simple_repeat Simple_repeat 2 128 0 1 755 30 0 0 0 chrUextra 22301381 22301411 -6703245 + AT_rich Low_complexity Low_complexity 1 30 0 1 755 5754 0 0 0 chrUextra 22301526 22302188 -6702468 + DOC LINE Jockey 2463 3124 -1601 1 755 2706 192 14 22 chrUextra 22302288 22302950 -6701706 - SAR_DM Satellite Satellite -664 656 1 1 755 681 126 8 16 chrUextra 22303053 22303182 -6701474 + SAR_DM Satellite Satellite 776 903 -569 1 755 796 30 0 0 chrUextra 22303092 22303192 -6701464 - ARS406_DM Unknown Unknown -164 189 90 1 755 2146 183 6 16 chrUextra 22303197 22303712 -6700944 + SAR_DM Satellite Satellite 496 1005 -467 1 755 38 0 0 0 chrUextra 22303812 22303850 -6700806 + AT_rich Low_complexity Low_complexity 1 38 0 1 755 899 74 6 18 chrUextra 22304587 22305234 -6699422 + RSP Satellite Satellite 1 639 0 1 755 266 286 107 89 chrUextra 22305553 22305833 -6698823 + Invader1_LTR LTR Gypsy 84 368 -55 1 755 2845 179 11 11 chrUextra 22306098 22306760 -6697896 - SAR_DM Satellite Satellite -555 917 256 1 755 2749 186 14 9 chrUextra 22307627 22308283 -6696373 - SAR_DM Satellite Satellite -532 940 282 1 755 5542 15 1 0 chrUextra 22308386 22309046 -6695610 - DMRT1A LINE R1 -1317 3866 3206 1 755 4856 10 8 0 chrUextra 22309146 22309759 -6694897 - ROO_I LTR Pao -7343 913 296 1 755 411 0 0 0 chrUextra 22309759 22309808 -6694848 - ROO_I LTR Pao -7862 394 346 1 755 5392 27 0 1 chrUextra 22309908 22310570 -6694086 + R1_DM LINE R1 2121 2781 -2575 1 755 4548 14 0 2 chrUextra 22310670 22311223 -6693433 + FW_DM LINE Jockey 4141 4692 0 1 755 254 29 0 0 chrUextra 22311227 22311261 -6693395 - R1_DM LINE R1 -3966 1390 1357 1 755 497 57 0 14 chrUextra 22311261 22311332 -6693324 - R1_DM LINE R1 -4150 1206 1137 1 755 2562 195 26 28 chrUextra 22311432 22312090 -6692566 - SAR_DM Satellite Satellite -659 656 1 1 755 3788 2 0 2 chrUextra 22312194 22312630 -6692026 - SSU-rRNA_Dme rRNA rRNA -1560 435 1 1 755 32 0 0 0 chrUextra 22312762 22312794 -6691862 + AT_rich Low_complexity Low_complexity 1 32 0 1 755 1176 0 0 0 chrUextra 22313158 22313293 -6691363 - 5S_DM RNA RNA 0 135 1 1 755 697 12 0 0 chrUextra 22313534 22313618 -6691038 - 5S_DM RNA RNA 0 135 52 1 755 5560 0 3 0 chrUextra 22313718 22314380 -6690276 - LSU-rRNA_Dme rRNA rRNA -3006 894 231 1 755 246 150 0 0 chrUextra 22314488 22314528 -6690128 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 755 246 150 0 0 chrUextra 22314580 22314620 -6690036 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 755 246 150 0 0 chrUextra 22314672 22314712 -6689944 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 755 246 150 0 0 chrUextra 22314764 22314804 -6689852 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 755 255 125 0 0 chrUextra 22314847 22314887 -6689769 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 755 22 56 0 0 chrUextra 22314900 22314936 -6689720 + AT_rich Low_complexity Low_complexity 1 36 0 1 755 870 9 0 27 chrUextra 22314962 22315074 -6689582 + NTS_DM Other Other 25 133 -107 1 755 512 29 15 0 chrUextra 22315074 22315142 -6689514 + NTS_DM Other Other 38 106 -134 1 755 2323 67 6 21 chrUextra 22315567 22315904 -6688752 - Baggins1 LINE LOA -262 5191 4860 1 755 5413 3 6 3 chrUextra 22316004 22316666 -6687990 + MAX_I LTR Pao 807 1470 -6444 1 755 261 103 14 29 chrUextra 22317152 22317222 -6687434 + (TAAAAA)n Simple_repeat Simple_repeat 4 72 0 1 755 24 32 0 0 chrUextra 22317730 22317761 -6686895 + AT_rich Low_complexity Low_complexity 1 31 0 1 755 23 0 0 0 chrUextra 22317837 22317860 -6686796 + AT_rich Low_complexity Low_complexity 1 23 0 1 755 519 90 11 53 chrUextra 22317860 22317954 -6686702 - BS3_DM LINE Jockey -1 1789 1700 1 755 1620 6 4 28 chrUextra 22318414 22318949 -6685707 + (TTCTC)n Simple_repeat Simple_repeat 1 521 0 1 755 5673 3 9 0 chrUextra 22319052 22319714 -6684942 + Copia2_I LTR Copia 527 1194 -2968 1 755 2837 184 24 8 chrUextra 22319814 22320476 -6684180 + SAR_DM Satellite Satellite 261 933 -539 1 755 4384 2 0 0 chrUextra 22322100 22322599 -6682057 - SSU-rRNA_Dme rRNA rRNA -1496 499 1 1 755 30 0 0 0 chrUextra 22322732 22322762 -6681894 + AT_rich Low_complexity Low_complexity 1 30 0 1 755 5444 1 1 14 chrUextra 22324386 22325048 -6679608 + SSU-rRNA_Dme rRNA rRNA 697 1350 -645 1 755 28 48 0 0 chrUextra 22325212 22325254 -6679402 + AT_rich Low_complexity Low_complexity 1 42 0 1 755 488 119 36 0 chrUextra 22325527 22325611 -6679045 - NTS_DM Other Other -150 90 4 1 755 546 12 11 34 chrUextra 22325721 22325809 -6678847 - NTS_DM Other Other -78 162 77 1 755 21 57 0 0 chrUextra 22326400 22326435 -6678221 + AT_rich Low_complexity Low_complexity 1 35 0 1 755 4544 51 33 29 chrUextra 22326672 22327333 -6677323 + R1_DM LINE R1 597 1260 -4096 1 755 411 166 0 0 chrUextra 22327434 22327523 -6677133 + ROVER-I_DM LTR Gypsy 5230 5308 -1276 1 755 2386 166 24 9 chrUextra 22327548 22328095 -6676561 + ROVER-I_DM LTR Gypsy 5990 6544 -40 1 755 2600 173 13 19 chrUextra 22328199 22328858 -6675798 + SAR_DM Satellite Satellite 1 655 -396 1 755 436 155 0 0 chrUextra 22328999 22329070 -6675586 - TAHRE LINE telomeric -2867 7596 7526 1 755 510 273 26 26 chrUextra 22329341 22329567 -6675089 - Copia_I LTR Copia -2314 2279 2054 1 755 5718 1 0 0 chrUextra 22329720 22330382 -6674274 - R1_DM LINE R1 -3195 2161 1500 1 755 5294 23 15 1 chrUextra 22331244 22331906 -6672750 - R1_DM LINE R1 -2024 3332 2662 1 755 5489 8 5 5 chrUextra 22332006 22332668 -6671988 - LSU-rRNA_Dme rRNA rRNA -2128 1772 1111 1 755 4999 6 3 8 chrUextra 22333532 22334189 -6670467 + Stalker2_I LTR Gypsy 896 1549 -5853 1 755 5654 5 0 0 chrUextra 22334292 22334954 -6669702 - R1_DM LINE R1 -3213 2143 1482 1 755 4865 52 5 9 chrUextra 22335054 22335716 -6668940 - BATUMI_I LTR Pao -4087 3876 3218 1 755 5644 1 1 0 chrUextra 22335816 22336478 -6668178 - ROO_I LTR Pao -3470 4786 4124 1 755 5795 1 0 0 chrUextra 22336578 22337240 -6667416 - Gypsy4_I LTR Gypsy -243 6045 5384 1 755 3043 175 6 6 chrUextra 22337341 22337997 -6666659 + SAR_DM Satellite Satellite 282 937 -535 1 755 5226 0 0 39 chrUextra 22338102 22338764 -6665892 - LSU-rRNA_Dme rRNA rRNA -3246 654 19 1 755 5767 0 6 0 chrUextra 22338864 22339526 -6665130 + LSU-rRNA_Dme rRNA rRNA 2677 3342 -558 1 755 5378 35 0 0 chrUextra 22339626 22340288 -6664368 - R1_DM LINE R1 -3452 1904 1243 1 755 1062 0 0 0 chrUextra 22340868 22340986 -6663670 + (TTCTC)n Simple_repeat Simple_repeat 3 120 0 1 755 2550 184 54 20 chrUextra 22341156 22341812 -6662844 + SAR_DM Satellite Satellite 1 677 -208 1 755 4978 16 8 27 chrUextra 22341912 22342574 -6662082 + MDG1_I LTR Gypsy 492 1140 -5456 1 755 2997 166 8 12 chrUextra 22342678 22343331 -6661325 - SAR_DM Satellite Satellite -577 895 246 1 755 245 133 0 0 chrUextra 22343291 22343336 -6661320 + ARS406_DM Unknown Unknown 1 45 -308 1 755 3155 0 0 0 chrUextra 22343436 22343794 -6660862 - LSU-rRNA_Dme rRNA rRNA -1755 2145 1788 1 755 2113 4 8 4 chrUextra 22343838 22344098 -6660558 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1528 1 755 3128 155 20 8 chrUextra 22344198 22344860 -6659796 - SAR_DM Satellite Satellite -420 1052 383 1 755 2053 220 12 9 chrUextra 22344962 22345622 -6659034 + G6_DM LINE Jockey 791 1426 -616 1 755 2940 176 11 8 chrUextra 22345722 22346384 -6658272 - SAR_DM Satellite Satellite -467 1005 342 1 755 677 94 0 9 chrUextra 22346506 22346613 -6658043 + TART LINE telomeric 5649 5754 -8723 1 755 2396 132 35 0 chrUextra 22346636 22347145 -6657511 + TART_B1 LINE telomeric 1746 2272 -8382 1 755 576 192 0 16 chrUextra 22347246 22347368 -6657288 + DMLTR5 LTR Gypsy 143 262 -4 1 755 2163 119 80 83 chrUextra 22347369 22347908 -6656748 + HMSBEAGLE_I LTR Gypsy 2 538 -5991 1 755 2662 185 6 14 chrUextra 22348008 22348650 -6656006 - SAR_DM Satellite Satellite -641 831 195 1 755 743 88 0 0 chrUextra 22348557 22348670 -6655986 + ARS406_DM Unknown Unknown 1 113 -240 1 755 5174 5 0 0 chrUextra 22348770 22349432 -6655224 - DM176_I LTR Gypsy -167 6253 5592 1 755 5373 23 18 0 chrUextra 22349532 22350194 -6654462 + R1_DM LINE R1 1488 2161 -3195 1 755 1239 14 7 0 chrUextra 22350294 22350442 -6654214 - Invader1_LTR LTR Gypsy -274 149 1 1 755 806 250 0 30 chrUextra 22350720 22350955 -6653701 - Invader5_I LTR Gypsy -2166 1168 941 1 755 512 163 98 65 chrUextra 22351069 22351253 -6653403 + Gypsy12_LTR LTR Gypsy 980 1169 -1167 1 755 2704 31 87 0 chrUextra 22351272 22351628 -6653028 - CIRCE LINE Composite -5969 387 1 1 755 567 90 0 11 chrUextra 22351628 22351718 -6652938 - CIRCE LINE Composite 0 6356 6268 1 755 276 140 0 50 chrUextra 22351818 22351878 -6652778 + G5A_DM LINE Jockey 2736 2792 -49 1 755 5651 1 0 1 chrUextra 22352580 22353242 -6651414 + ROO_I LTR Pao 3909 4569 -3687 1 755 5230 20 15 1 chrUextra 22353342 22354004 -6650652 - FW_DM LINE Jockey -1327 3365 2695 1 755 5650 5 0 0 chrUextra 22354104 22354766 -6649890 + DMRT1B LINE R1 2202 2863 -2320 1 755 2691 185 8 23 chrUextra 22354866 22355525 -6649131 + SAR_DM Satellite Satellite 442 1090 -382 1 755 3524 35 72 8 chrUextra 22356390 22356878 -6647778 + IDEFIX_LTR LTR Gypsy 76 594 0 1 755 2113 173 6 9 chrUextra 22357152 22357606 -6647050 + SAR_DM Satellite Satellite 1 594 -630 1 755 1022 89 0 0 chrUextra 22357606 22357764 -6646892 - ARS406_DM Unknown Unknown -195 158 1 1 755 2113 173 6 9 chrUextra 22357764 22357809 -6646847 + SAR_DM Satellite Satellite 595 655 -569 1 755 2819 174 9 11 chrUextra 22357914 22358576 -6646080 + SAR_DM Satellite Satellite 198 858 -614 1 755 2992 174 8 9 chrUextra 22358676 22359338 -6645318 + SAR_DM Satellite Satellite 408 1068 -404 1 755 21 89 0 0 chrUextra 22359980 22360036 -6644620 + AT_rich Low_complexity Low_complexity 1 56 0 1 755 393 0 0 0 chrUextra 22360055 22360100 -6644556 - SSU-rRNA_Dme rRNA rRNA 0 1995 1951 1 755 5651 3 0 0 chrUextra 22360200 22360862 -6643794 - R1_DM LINE R1 -1903 3453 2792 1 755 1934 273 11 21 chrUextra 22361724 22362352 -6642304 - Invader4_I LTR Gypsy -1641 772 151 1 755 926 307 24 36 chrUextra 22362511 22363141 -6641515 + BLOOD_I LTR Gypsy 1748 2465 -4148 1 755 2667 164 11 14 chrUextra 22363248 22363910 -6640746 + BATUMI_I LTR Pao 4212 4873 -3041 1 755 2336 164 6 6 chrUextra 22364010 22364669 -6639987 + SAR_DM Satellite Satellite 1 659 -535 1 755 613 14 0 0 chrUextra 22364772 22364843 -6639813 + STALKER4_LTR LTR Gypsy 187 257 -145 1 755 4230 14 0 0 chrUextra 22364846 22365353 -6639303 - DM176_LTR LTR Gypsy 0 507 1 1 755 711 0 0 0 chrUextra 22365353 22365434 -6639222 - DM176_I LTR Gypsy 0 6420 6340 1 755 2297 0 0 0 chrUextra 22365554 22365830 -6638826 - Copia_LTR LTR Copia 0 276 1 1 755 5521 23 0 0 chrUextra 22366296 22366958 -6637698 + MAX_I LTR Pao 1958 2619 -5295 1 755 862 28 0 0 chrUextra 22367058 22367166 -6637490 + NTS_DM Other Other 26 133 -107 1 755 1222 18 0 12 chrUextra 22367166 22367332 -6637324 + NTS_DM Other Other 38 201 -39 1 755 870 9 0 27 chrUextra 22367384 22367496 -6637160 + NTS_DM Other Other 25 133 -107 1 755 1252 18 0 6 chrUextra 22367496 22367661 -6636995 + NTS_DM Other Other 38 201 -39 1 755 1140 0 7 0 chrUextra 22367820 22367955 -6636701 - R1_DM LINE R1 -5220 136 1 1 755 4343 2 0 0 chrUextra 22367984 22368482 -6636174 - LSU-rRNA_Dme rRNA rRNA -1246 2654 2157 1 755 1549 0 5 5 chrUextra 22368582 22368768 -6635888 - R1_DM LINE R1 -5170 186 1 1 755 4141 2 0 0 chrUextra 22368768 22369244 -6635412 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2157 1 755 5603 0 0 1 chrUextra 22369348 22370006 -6634650 + ROO_I LTR Pao 3640 4296 -3960 1 755 361 155 0 0 chrUextra 22370108 22370179 -6634477 - ARS406_DM Unknown Unknown -282 71 1 1 755 2524 186 26 11 chrUextra 22370123 22370768 -6633888 + SAR_DM Satellite Satellite 230 884 -588 1 755 29 28 0 0 chrUextra 22371101 22371137 -6633519 + AT_rich Low_complexity Low_complexity 1 36 0 1 755 5759 0 0 0 chrUextra 22371630 22372292 -6632364 + R1_DM LINE R1 2015 2676 -2680 1 755 34 24 0 0 chrUextra 22372683 22372724 -6631932 + AT_rich Low_complexity Low_complexity 1 41 0 1 755 21 95 0 0 chrUextra 22372937 22373000 -6631656 + AT_rich Low_complexity Low_complexity 1 63 0 1 755 315 0 0 24 chrUextra 22373012 22373054 -6631602 + LSU-rRNA_Dme rRNA rRNA 1 41 -3859 1 755 3054 165 11 8 chrUextra 22373154 22373812 -6630844 - SAR_DM Satellite Satellite -444 1028 369 1 755 2393 102 13 34 chrUextra 22373950 22374578 -6630078 - DMSAT6 Satellite Satellite -3 615 1 1 755 5585 3 6 0 chrUextra 22374678 22375340 -6629316 + MDG3_I LTR Gypsy 3037 3702 -1284 1 755 5629 6 1 0 chrUextra 22375440 22376102 -6628554 - R1_DM LINE R1 -254 5102 4440 1 755 2758 179 9 23 chrUextra 22376202 22376864 -6627792 + SAR_DM Satellite Satellite 438 1090 -382 1 755 5357 14 3 0 chrUextra 22376964 22377626 -6627030 - STALKER4_I LTR Gypsy -3250 3280 2617 1 755 25 48 0 46 chrUextra 22377787 22377852 -6626804 + AT_rich Low_complexity Low_complexity 1 62 0 1 755 4921 3 0 0 chrUextra 22378488 22379054 -6625602 + LSU-rRNA_Dme rRNA rRNA 2016 2581 -1319 1 755 709 10 31 0 chrUextra 22379053 22379150 -6625506 + R2_DM LINE R2 3 102 -3505 1 755 2350 199 28 26 chrUextra 22379259 22379912 -6624744 + SAR_DM Satellite Satellite 1 654 -208 1 755 2881 183 8 9 chrUextra 22380012 22380674 -6623982 + SAR_DM Satellite Satellite 256 916 -556 1 755 5550 11 0 0 chrUextra 22380774 22381436 -6623220 - Gypsy4_I LTR Gypsy -736 5552 4891 1 755 393 22 0 0 chrUextra 22381536 22381582 -6623074 + (TTCTC)n Simple_repeat Simple_repeat 1 46 0 1 755 2888 81 24 0 chrUextra 22382297 22382706 -6621950 + BS3_DM LINE Jockey 3 421 -1369 1 755 1899 63 8 0 chrUextra 22382706 22382958 -6621698 + BS3_DM LINE Jockey 526 779 -1011 1 755 5172 2 0 39 chrUextra 22383058 22383719 -6620937 - LSU-rRNA_Dme rRNA rRNA -3220 680 46 1 755 5371 2 2 0 chrUextra 22383866 22384480 -6620176 + SSU-rRNA_Dme rRNA rRNA 1 615 -1380 1 755 5557 1 5 5 chrUextra 22384582 22385241 -6619415 + LSU-rRNA_Dme rRNA rRNA 835 1493 -2407 1 755 4107 65 38 21 chrUextra 22385341 22386002 -6618654 - HETA LINE telomeric -850 5231 4560 1 755 2932 179 14 8 chrUextra 22386108 22386762 -6617894 + SAR_DM Satellite Satellite 246 903 -569 1 755 252 208 0 0 chrUextra 22387003 22387056 -6617600 + NOMAD_I LTR Gypsy 6520 6572 0 1 755 386 122 176 0 chrUextra 22387404 22387478 -6617178 - DNAREP1_DM LINE Penelope -201 393 307 1 755 31 0 0 0 chrUextra 22387491 22387522 -6617134 + AT_rich Low_complexity Low_complexity 1 31 0 1 755 2776 184 20 6 chrUextra 22387636 22388285 -6616371 - SAR_DM Satellite Satellite -396 1076 419 1 755 2847 170 11 9 chrUextra 22388399 22389045 -6615611 + SAR_DM Satellite Satellite 326 972 -500 1 755 517 0 51 38 chrUextra 22389146 22389225 -6615431 + NTS_DM Other Other 161 240 0 1 755 1260 6 0 24 chrUextra 22389225 22389391 -6615265 + NTS_DM Other Other 1 162 -78 1 755 488 119 36 0 chrUextra 22389501 22389585 -6615071 + NTS_DM Other Other 4 90 -150 1 755 2822 181 9 9 chrUextra 22389909 22390567 -6614089 - SAR_DM Satellite Satellite -610 862 205 1 755 1903 38 0 0 chrUextra 22390669 22390906 -6613750 + CIRCE LINE Composite 1646 1882 -4474 1 755 579 296 42 57 chrUextra 22390915 22391317 -6613339 + Gypsy12_I LTR Gypsy 3835 4230 -1316 1 755 2805 15 6 17 chrUextra 22390982 22391329 -6613327 + CIRCE LINE Composite 1888 2230 -4126 1 755 2875 3 3 68 chrUextra 22391429 22391813 -6612843 - LSU-rRNA_Dme rRNA rRNA -3541 359 1 1 755 21 95 0 0 chrUextra 22391825 22391888 -6612768 + AT_rich Low_complexity Low_complexity 1 63 0 1 755 1237 7 0 0 chrUextra 22392190 22392335 -6612321 + LSU-rRNA_Dme rRNA rRNA 78 222 -3678 1 755 4394 0 0 0 chrUextra 22392353 22392851 -6611805 + R2_DM LINE R2 1481 1978 -1629 1 755 5695 0 1 0 chrUextra 22392951 22393612 -6611044 + FW_DM LINE Jockey 3833 4494 -198 1 755 3009 164 11 8 chrUextra 22393726 22394373 -6610283 + SAR_DM Satellite Satellite 369 1017 -455 1 755 2847 182 11 9 chrUextra 22394473 22395134 -6609522 - SAR_DM Satellite Satellite -555 917 256 1 755 3952 9 0 0 chrUextra 22395235 22395702 -6608954 - DM176_LTR LTR Gypsy -40 467 1 1 755 1448 22 0 0 chrUextra 22395713 22395895 -6608761 - DM176_LTR LTR Gypsy 0 507 326 1 755 5240 32 5 1 chrUextra 22395997 22396656 -6608000 - R1_DM LINE R1 -2485 2871 2211 1 755 4631 19 92 0 chrUextra 22396756 22397417 -6607239 + R1_DM LINE R1 2016 2737 -2619 1 755 5379 17 5 6 chrUextra 22397517 22398178 -6606478 + R1_DM LINE R1 3168 3827 -1529 1 755 5251 27 5 3 chrUextra 22398280 22398939 -6605717 + R1_DM LINE R1 2485 3144 -2212 1 755 347 296 18 18 chrUextra 22399323 22399488 -6605168 - MDG3_I LTR Gypsy -1559 3427 3263 1 755 5357 14 0 0 chrUextra 22399802 22400461 -6604195 + QUASIMODO_I LTR Gypsy 1027 1685 -4375 1 755 2365 14 0 0 chrUextra 22400561 22400839 -6603817 + PROTOP_A DNA P 828 1105 0 1 755 1984 62 71 0 chrUextra 22400839 22401222 -6603434 + PROTOP_B DNA P 420 754 -399 1 755 2728 0 0 0 chrUextra 22401322 22401633 -6603023 + LSU-rRNA_Dme rRNA rRNA 2322 2632 -1268 1 755 3001 3 6 0 chrUextra 22401633 22401983 -6602673 + R1_DM LINE R1 1 352 -5004 1 755 1223 88 365 0 chrUextra 22402210 22402473 -6602183 + MAX_I LTR Pao 557 915 -6999 1 755 298 0 0 0 chrUextra 22402587 22402623 -6602033 + MAX_I LTR Pao 920 955 -6959 1 755 402 75 98 24 chrUextra 22402662 22402744 -6601912 + MAX_I LTR Pao 938 1025 -6889 1 755 4545 0 0 0 chrUextra 22402984 22403505 -6601151 - DMRT1B LINE R1 0 5183 4663 1 755 3413 19 0 0 chrUextra 22403605 22404020 -6600636 + R1_DM LINE R1 3868 4282 -1074 1 755 1870 22 4 0 chrUextra 22404040 22404266 -6600390 + R1_DM LINE R1 4407 4633 -723 1 755 246 150 0 0 chrUextra 22404367 22404407 -6600249 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 755 246 150 0 0 chrUextra 22404459 22404499 -6600157 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 755 255 125 0 0 chrUextra 22404542 22404582 -6600074 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 755 22 56 0 0 chrUextra 22404595 22404631 -6600025 + AT_rich Low_complexity Low_complexity 1 36 0 1 755 870 9 0 27 chrUextra 22404657 22404769 -6599887 + NTS_DM Other Other 25 133 -107 1 755 1252 18 0 6 chrUextra 22404769 22404934 -6599722 + NTS_DM Other Other 38 201 -39 1 755 285 0 0 75 chrUextra 22404987 22405027 -6599629 + NTS_DM Other Other 25 61 -179 1 755 5765 0 1 1 chrUextra 22405127 22405788 -6598868 + LSU-rRNA_Dme rRNA rRNA 3031 3691 -209 1 755 5232 20 0 0 chrUextra 22405888 22406549 -6598107 + IDEFIX_I LTR Gypsy 4431 5091 -537 1 755 3544 0 5 0 chrUextra 22406649 22407057 -6597599 + SSU-rRNA_Dme rRNA rRNA 1586 1995 0 1 755 21 89 0 0 chrUextra 22407076 22407132 -6597524 + AT_rich Low_complexity Low_complexity 1 56 0 1 755 5517 0 0 1 chrUextra 22407413 22408071 -6596585 + ROO_I LTR Pao 3341 3997 -4259 1 755 859 136 13 6 chrUextra 22408178 22408334 -6596322 - HOBO DNA hAT 0 3016 2860 1 755 537 81 140 140 chrUextra 22408335 22408521 -6596135 - HOBO DNA hAT -403 2613 2428 1 755 30 45 0 0 chrUextra 22408543 22408587 -6596069 + AT_rich Low_complexity Low_complexity 1 44 0 1 755 1492 85 21 8 chrUextra 22408592 22408830 -6595826 - HOBO DNA hAT -602 2414 2174 1 755 2887 185 8 8 chrUextra 22408933 22409593 -6595063 - SAR_DM Satellite Satellite -563 909 250 1 755 360 0 0 0 chrUextra 22409792 22409832 -6594824 + (TTA)n Simple_repeat Simple_repeat 3 42 0 1 755 714 81 8 59 chrUextra 22410454 22410572 -6594084 + Baggins1 LINE LOA 5080 5191 -262 1 755 1600 162 8 213 chrUextra 22411217 22411875 -6592781 + TAHRE LINE telomeric 7044 7516 -2947 1 755 5343 21 14 0 chrUextra 22411976 22412637 -6592019 + R1_DM LINE R1 4361 5030 -326 1 94 5713 3 0 0 chrUextra 22412740 22413398 -6591258 - LSU-rRNA_Dme rRNA rRNA -871 3029 2372 1 756 3032 171 9 8 chrUextra 22413500 22414159 -6590497 + SAR_DM Satellite Satellite 346 1005 -467 1 756 2283 220 30 7 chrUextra 22414259 22414920 -6589736 - SAR_DM Satellite Satellite -1091 675 1 1 756 1595 0 0 10 chrUextra 22415781 22415973 -6588683 - FW_DM LINE Jockey -2244 2448 2259 1 756 3953 19 23 0 chrUextra 22415961 22416442 -6588214 - Gypsy4_I LTR Gypsy -2600 3688 3197 1 756 5719 0 1 3 chrUextra 22416542 22417203 -6587453 + SSU-rRNA_Dme rRNA rRNA 1242 1901 -94 1 756 4757 18 3 58 chrUextra 22417303 22417964 -6586692 - BATUMI_I LTR Pao -4887 3076 2452 1 756 5567 1 6 3 chrUextra 22418064 22418725 -6585931 - LSU-rRNA_Dme rRNA rRNA -2133 1767 1105 1 756 374 283 19 19 chrUextra 22418825 22419034 -6585622 + Copia_I LTR Copia 2071 2279 -2314 1 756 267 152 73 29 chrUextra 22419411 22419479 -6585177 - DM176_LTR LTR Gypsy -213 294 224 1 756 5183 27 9 1 chrUextra 22419588 22420247 -6584409 + DOC2_DM LINE Jockey 916 1579 -3214 1 756 3053 3 0 0 chrUextra 22420349 22420698 -6583958 + LSU-rRNA_Dme rRNA rRNA 2284 2632 -1268 1 756 2633 7 7 0 chrUextra 22420698 22421008 -6583648 + R1_DM LINE R1 1 312 -5044 1 756 5396 21 5 0 chrUextra 22421108 22421769 -6582887 - MAX_I LTR Pao -2426 5488 4825 1 756 312 213 0 21 chrUextra 22421872 22421968 -6582688 + XDMR_DM Unknown Unknown 267 360 0 1 756 2561 186 8 22 chrUextra 22421882 22422529 -6582127 - SAR_DM Satellite Satellite -354 1118 481 1 756 2282 78 6 51 chrUextra 22422644 22423291 -6581365 + DMSAT6 Satellite Satellite 1 617 0 1 756 4430 96 26 1 chrUextra 22423391 22424051 -6580605 - R1_DM LINE R1 -3997 1359 684 1 756 1252 25 0 6 chrUextra 22424152 22424315 -6580341 - NTS_DM Other Other -78 162 1 1 756 1438 15 20 20 chrUextra 22424315 22424518 -6580138 - NTS_DM Other Other 0 240 38 1 756 870 9 0 27 chrUextra 22424518 22424630 -6580026 - NTS_DM Other Other -107 133 25 1 756 887 31 0 8 chrUextra 22424682 22424813 -6579843 - NTS_DM Other Other -39 201 72 1 756 5507 11 3 0 chrUextra 22424913 22425574 -6579082 - Gypsy4_I LTR Gypsy -424 5864 5202 1 756 1526 29 0 99 chrUextra 22425835 22426068 -6578588 + DIVER2_I LTR Pao 1366 1575 -2572 1 756 2224 19 4 0 chrUextra 22426066 22426335 -6578321 + DIVER2_I LTR Pao 3743 4012 -135 1 756 4531 0 6 0 chrUextra 22426435 22426977 -6577679 - Gypsy_I LTR Gypsy -5962 545 1 1 756 1029 8 0 0 chrUextra 22426975 22427096 -6577560 - Gypsy_LTR LTR Gypsy 0 482 362 1 756 5498 11 0 9 chrUextra 22427196 22427857 -6576799 - FW_DM LINE Jockey -1965 2727 2073 1 756 551 140 18 0 chrUextra 22428040 22428154 -6576502 + HETA LINE telomeric 5795 5910 -171 1 756 28 0 0 0 chrUextra 22428177 22428205 -6576451 + AT_rich Low_complexity Low_complexity 1 28 0 1 756 4172 0 0 0 chrUextra 22428718 22429197 -6575459 + R1_DM LINE R1 4878 5356 0 1 756 1604 5 0 0 chrUextra 22429195 22429379 -6575277 + LSU-rRNA_Dme rRNA rRNA 2640 2823 -1077 1 756 2913 169 39 9 chrUextra 22429479 22430140 -6574516 - SAR_DM Satellite Satellite -539 933 253 1 756 5386 18 6 0 chrUextra 22430240 22430901 -6573755 + DOC2_DM LINE Jockey 918 1582 -3211 1 756 2864 167 11 12 chrUextra 22431006 22431661 -6572995 + SAR_DM Satellite Satellite 321 974 -498 1 756 5686 1 0 0 chrUextra 22431762 22432423 -6572233 + R1_DM LINE R1 2739 3399 -1957 1 756 2711 174 11 11 chrUextra 22432523 22433155 -6571501 - SAR_DM Satellite Satellite -646 826 195 1 756 664 123 0 8 chrUextra 22433061 22433184 -6571472 + ARS406_DM Unknown Unknown 1 122 -231 1 756 4864 38 17 5 chrUextra 22433284 22433943 -6570713 - IDEFIX_I LTR Gypsy -1006 4622 3956 1 756 21 89 0 0 chrUextra 22434086 22434142 -6570514 + AT_rich Low_complexity Low_complexity 1 56 0 1 756 21 57 0 0 chrUextra 22434180 22434215 -6570441 + AT_rich Low_complexity Low_complexity 1 35 0 1 756 243 57 0 0 chrUextra 22434671 22434706 -6569950 - PROTOP_B DNA P 0 1153 1119 1 756 2975 175 9 8 chrUextra 22434806 22435467 -6569189 - SAR_DM Satellite Satellite -396 1076 415 1 756 997 65 0 0 chrUextra 22435567 22435706 -6568950 + ARS406_DM Unknown Unknown 44 182 -171 1 756 2172 186 10 11 chrUextra 22435704 22436226 -6568430 - SAR_DM Satellite Satellite -478 994 474 1 756 5660 1 0 1 chrUextra 22436328 22436989 -6567667 - R1_DM LINE R1 -3371 1985 1326 1 756 5334 35 1 0 chrUextra 22437089 22437750 -6566906 - R1_DM LINE R1 -353 5003 4342 1 756 1437 39 67 3 chrUextra 22437850 22438206 -6566450 - DOC2_DM LINE Jockey -4371 422 10 1 756 1509 138 14 7 chrUextra 22438219 22438510 -6566146 + SAR_DM Satellite Satellite 380 672 -800 1 756 1117 18 23 23 chrUextra 22438614 22438785 -6565871 + NTS_DM Other Other 70 240 0 1 756 1861 0 17 13 chrUextra 22438785 22439024 -6565632 + NTS_DM Other Other 1 240 0 1 756 1839 4 17 13 chrUextra 22439024 22439263 -6565393 + NTS_DM Other Other 1 240 0 1 756 2002 198 74 38 chrUextra 22439394 22440029 -6564627 + Gypsy12_LTR LTR Gypsy 901 1558 -778 1 756 4183 4 44 2 chrUextra 22440133 22440636 -6564020 + DMRT1B LINE R1 4660 5183 0 1 756 1386 0 0 0 chrUextra 22440640 22440794 -6563862 + (CACAA)n Simple_repeat Simple_repeat 4 157 0 1 756 1098 0 0 0 chrUextra 22441433 22441555 -6563101 + (TTCTC)n Simple_repeat Simple_repeat 2 123 0 1 756 516 273 67 0 chrUextra 22441945 22442110 -6562546 - Gypsy12_I LTR Gypsy -2217 3329 3154 1 756 1067 126 0 0 chrUextra 22442141 22442316 -6562340 + DMRT1B LINE R1 3134 3308 -1875 1 756 268 22 0 61 chrUextra 22442416 22442465 -6562191 + NTS_DM Other Other 117 162 -78 1 756 488 119 36 0 chrUextra 22442575 22442659 -6561997 + NTS_DM Other Other 4 90 -150 1 756 28 48 0 0 chrUextra 22442932 22442974 -6561682 + AT_rich Low_complexity Low_complexity 1 42 0 1 756 22 56 0 0 chrUextra 22443217 22443253 -6561403 + AT_rich Low_complexity Low_complexity 1 36 0 1 756 4493 0 2 0 chrUextra 22443325 22443838 -6560818 - LSU-rRNA_Dme rRNA rRNA 0 3900 3387 1 756 2989 168 11 8 chrUextra 22443950 22444599 -6560057 + SAR_DM Satellite Satellite 369 1019 -453 1 756 3587 83 68 2 chrUextra 22444699 22445360 -6559296 + IDEFIX_I LTR Gypsy 2209 3263 -2797 1 756 5430 20 1 6 chrUextra 22445460 22446121 -6558535 - Gypsy2_I LTR Gypsy -3477 2658 2001 1 756 32 0 0 0 chrUextra 22446278 22446310 -6558346 + AT_rich Low_complexity Low_complexity 1 32 0 1 756 28 48 0 0 chrUextra 22446638 22446680 -6557976 + AT_rich Low_complexity Low_complexity 1 42 0 1 756 5582 11 1 0 chrUextra 22446982 22447643 -6557013 + DOC2_DM LINE Jockey 2324 2985 -1808 1 756 2898 164 17 9 chrUextra 22447752 22448404 -6556252 + SAR_DM Satellite Satellite 195 851 -621 1 756 5575 3 21 1 chrUextra 22448504 22449165 -6555491 + ROO_I LTR Pao 5174 5847 -2409 1 756 5725 1 1 0 chrUextra 22449267 22449926 -6554730 - LSU-rRNA_Dme rRNA rRNA -1406 2494 1835 1 756 5043 18 0 1 chrUextra 22450034 22450687 -6553969 - IDEFIX_I LTR Gypsy 0 5628 4977 1 756 4133 82 112 12 chrUextra 22450787 22451430 -6553226 + Gypsy12_I LTR Gypsy 4396 5102 -444 1 756 3106 162 11 8 chrUextra 22451551 22452209 -6552447 + SAR_DM Satellite Satellite 369 1028 -444 1 756 5530 3 6 3 chrUextra 22452312 22452970 -6551686 - LSU-rRNA_Dme rRNA rRNA -2132 1768 1109 1 756 401 0 0 57 chrUextra 22453070 22453123 -6551533 - NTS_DM Other Other -166 74 25 1 756 22 56 0 0 chrUextra 22453149 22453185 -6551471 + AT_rich Low_complexity Low_complexity 1 36 0 1 756 255 125 0 0 chrUextra 22453198 22453238 -6551418 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 756 246 150 0 0 chrUextra 22453281 22453321 -6551335 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 756 246 150 0 0 chrUextra 22453373 22453413 -6551243 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 756 246 150 0 0 chrUextra 22453465 22453505 -6551151 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 756 22 56 0 0 chrUextra 22453510 22453546 -6551110 + AT_rich Low_complexity Low_complexity 1 36 0 1 756 988 0 0 0 chrUextra 22453619 22453731 -6550925 - LSU-rRNA_Dme rRNA rRNA 0 3900 3789 1 756 547 216 127 95 chrUextra 22453831 22454200 -6550456 + Gypsy12_LTR LTR Gypsy 1311 1691 -645 1 756 1697 127 7 20 chrUextra 22454194 22454492 -6550164 + Gypsy12_I LTR Gypsy 223 516 -5030 1 756 5583 5 0 3 chrUextra 22454592 22455253 -6549403 - R1_DM LINE R1 -1786 3570 2912 1 756 5482 6 0 0 chrUextra 22455353 22456014 -6548642 + QUASIMODO_I LTR Gypsy 3672 4332 -1728 1 756 5427 5 0 0 chrUextra 22456875 22457536 -6547120 - IDEFIX_I LTR Gypsy -1086 4542 3882 1 756 5139 22 11 0 chrUextra 22457657 22458297 -6546359 + ROVER-I_DM LTR Gypsy 772 1418 -5166 1 756 439 335 10 10 chrUextra 22458508 22458804 -6545852 - GTWIN_I LTR Gypsy -2883 3538 3190 1 756 1468 33 19 0 chrUextra 22458815 22459029 -6545627 - TLD2 Unknown Unknown 0 218 1 1 756 375 332 10 10 chrUextra 22458863 22459058 -6545598 - GTWIN_I LTR Gypsy -3504 2784 2590 1 756 1320 60 0 0 chrUextra 22459490 22459804 -6544852 + (TCTTG)n Simple_repeat Simple_repeat 1 314 0 1 756 28 48 0 0 chrUextra 22460691 22460733 -6543923 + AT_rich Low_complexity Low_complexity 1 42 0 1 756 488 119 36 0 chrUextra 22461006 22461090 -6543566 - NTS_DM Other Other -150 90 4 1 756 1072 34 0 26 chrUextra 22461189 22461341 -6543315 - NTS_DM Other Other -68 172 25 1 756 578 301 45 45 chrUextra 22461447 22461771 -6542885 - GTWIN_I LTR Gypsy -2902 3519 2969 1 756 286 269 21 43 chrUextra 22461821 22461961 -6542695 - DM297_I LTR Gypsy -3176 2991 2878 1 756 598 24 24 0 chrUextra 22461960 22462045 -6542611 - TLD2 Unknown Unknown -131 87 1 1 756 469 268 0 0 chrUextra 22461974 22462097 -6542559 - Gypsy4_I LTR Gypsy -3599 2689 2567 1 756 2674 181 8 10 chrUextra 22462202 22462828 -6541828 + SAR_DM Satellite Satellite 447 1071 -401 1 756 5426 24 0 1 chrUextra 22462963 22463624 -6541032 + R1_DM LINE R1 1666 2325 -3031 1 756 2671 199 14 20 chrUextra 22463724 22464385 -6540271 - SAR_DM Satellite Satellite -663 656 1 1 756 252 45 0 62 chrUextra 22464485 22464533 -6540123 + NTS_DM Other Other 118 162 -78 1 756 488 119 36 0 chrUextra 22464643 22464727 -6539929 + NTS_DM Other Other 4 90 -150 1 756 28 48 0 0 chrUextra 22465000 22465042 -6539614 + AT_rich Low_complexity Low_complexity 1 42 0 1 756 2090 0 0 0 chrUextra 22465246 22465496 -6539160 + DM176_I LTR Gypsy 6171 6420 0 1 756 3021 8 10 58 chrUextra 22465496 22465907 -6538749 + DM176_LTR LTR Gypsy 1 391 -116 1 756 333 131 0 0 chrUextra 22466012 22466073 -6538583 + (CTATT)n Simple_repeat Simple_repeat 2 62 0 1 756 5783 1 0 0 chrUextra 22466768 22467429 -6537227 - R2_DM LINE R2 -2197 1410 750 1 756 639 121 0 0 chrUextra 22469051 22469150 -6535506 + (TA)n Simple_repeat Simple_repeat 1 99 0 1 756 2316 8 0 0 chrUextra 22469150 22469416 -6535240 + DMLTR5 LTR Gypsy 1 266 0 1 756 2595 0 0 0 chrUextra 22469415 22469712 -6534944 + HMSBEAGLE_I LTR Gypsy 1 297 -6232 1 756 1176 0 0 0 chrUextra 22469899 22470034 -6534622 + 5S_DM RNA RNA 1 135 0 1 756 1129 15 0 0 chrUextra 22470275 22470410 -6534246 + 5S_DM RNA RNA 1 135 0 1 756 324 152 34 0 chrUextra 22470573 22470632 -6534024 + STALKER4_LTR LTR Gypsy 319 379 -23 1 756 28 48 0 0 chrUextra 22470770 22470812 -6533844 + AT_rich Low_complexity Low_complexity 1 42 0 1 756 1821 175 1 13 chrUextra 22470819 22471232 -6533424 + STALKER4_I LTR Gypsy 235 697 -6705 1 756 5317 17 1 5 chrUextra 22471334 22471995 -6532661 + R1_DM LINE R1 3430 4088 -1268 1 756 3287 81 11 33 chrUextra 22472095 22472617 -6532039 - Gypsy12_I LTR Gypsy -5035 511 1 1 756 279 186 34 34 chrUextra 22472631 22472720 -6531936 - Gypsy12A_LTR LTR Gypsy -553 1727 1639 1 756 495 0 0 0 chrUextra 22473462 22473517 -6531139 + (CACAA)n Simple_repeat Simple_repeat 1 55 0 1 756 5134 42 6 3 chrUextra 22473617 22474278 -6530378 + R1_DM LINE R1 1078 1740 -3616 1 756 2770 174 22 11 chrUextra 22474380 22475021 -6529635 - SAR_DM Satellite Satellite -601 871 224 1 756 352 197 0 0 chrUextra 22474959 22475035 -6529621 + ARS406_DM Unknown Unknown 1 76 -277 1 756 3081 171 8 8 chrUextra 22475140 22475800 -6528856 + SAR_DM Satellite Satellite 346 1005 -467 1 756 2856 220 1 0 chrUextra 22475909 22476559 -6528097 + ROVER-I_DM LTR Gypsy 2086 2736 -3848 1 756 2209 23 0 0 chrUextra 22476661 22476922 -6527734 - Gypsy4_I LTR Gypsy -3738 2550 2290 1 756 2808 11 63 0 chrUextra 22476922 22477070 -6527586 - Stalker3_LTR LTR Gypsy 0 372 225 1 756 207 0 0 0 chrUextra 22477070 22477093 -6527563 + (CTTAT)n Simple_repeat Simple_repeat 2 24 0 1 756 2808 11 63 0 chrUextra 22477093 22477294 -6527362 - Stalker3_LTR LTR Gypsy -148 224 2 1 756 239 0 0 0 chrUextra 22477294 22477322 -6527334 - Gypsy4_I LTR Gypsy -3995 2293 2266 1 756 2433 87 27 23 chrUextra 22478183 22478844 -6525812 + DMSAT6 Satellite Satellite 1 663 -280 1 756 5545 8 12 0 chrUextra 22479705 22480364 -6524292 - DOC2_DM LINE Jockey -2055 2738 2072 1 756 2158 8 8 0 chrUextra 22480466 22480725 -6523931 - R1_DM LINE R1 -5095 261 1 1 756 3033 2 122 0 chrUextra 22480725 22481127 -6523529 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2182 1 756 3019 171 11 8 chrUextra 22481227 22481888 -6522768 + SAR_DM Satellite Satellite 256 918 -554 1 756 3193 44 39 16 chrUextra 22482751 22483189 -6521467 + ROOA_I LTR Pao 3821 4268 -2581 1 756 1725 61 0 0 chrUextra 22483179 22483410 -6521246 + ROOA_I LTR Pao 4420 4650 -2199 1 756 5337 30 0 0 chrUextra 22483510 22484171 -6520485 + R1_DM LINE R1 3081 3741 -1615 1 756 2626 226 14 5 chrUextra 22484276 22484921 -6519735 - ROVER-I_DM LTR Gypsy -3983 2601 1951 1 756 5384 17 1 1 chrUextra 22485032 22485693 -6518963 + R1_DM LINE R1 3371 4031 -1325 1 756 5528 5 3 1 chrUextra 22485793 22486454 -6518202 - R1_DM LINE R1 -1295 4061 3400 1 756 5613 0 0 0 chrUextra 22486554 22487215 -6517441 - ROO_I LTR Pao -4594 3662 3002 1 756 5417 20 3 1 chrUextra 22487315 22487976 -6516680 - FW_DM LINE Jockey -214 4478 3817 1 756 2805 177 11 11 chrUextra 22488837 22489498 -6515158 - SAR_DM Satellite Satellite -515 957 297 1 756 5182 36 14 3 chrUextra 22489598 22490259 -6514397 - MAX_I LTR Pao -893 7021 6354 1 756 2898 170 9 11 chrUextra 22490365 22491018 -6513638 - SAR_DM Satellite Satellite -396 1076 425 1 756 3133 161 9 12 chrUextra 22491120 22491781 -6512875 + SAR_DM Satellite Satellite 389 1047 -425 1 756 3704 2 0 2 chrUextra 22491881 22492309 -6512347 - ROO_LTR LTR Pao -1 427 1 1 756 358 23 0 0 chrUextra 22492642 22492685 -6511971 - NTS_DM Other Other -197 43 1 1 756 1378 20 20 25 chrUextra 22492685 22492889 -6511767 - NTS_DM Other Other 0 240 38 1 756 817 0 0 0 chrUextra 22492889 22492985 -6511671 - NTS_DM Other Other -107 133 38 1 756 832 9 9 27 chrUextra 22492985 22493096 -6511560 - NTS_DM Other Other -107 133 25 1 756 21 57 0 0 chrUextra 22493122 22493157 -6511499 + AT_rich Low_complexity Low_complexity 1 35 0 1 756 1042 21 0 7 chrUextra 22493157 22493303 -6511353 - NTS_DM Other Other -39 201 57 1 756 567 65 0 31 chrUextra 22493403 22493499 -6511157 + (TTCTC)n Simple_repeat Simple_repeat 1 93 0 1 756 2814 184 8 6 chrUextra 22494174 22494825 -6509831 + SAR_DM Satellite Satellite 332 983 -489 1 756 3015 162 29 8 chrUextra 22494928 22495586 -6509070 + SAR_DM Satellite Satellite 252 923 -549 1 756 697 146 80 7 chrUextra 22496452 22496590 -6508066 - DNAREP1_DM LINE Penelope -425 169 22 1 756 5595 1 1 1 chrUextra 22497210 22497869 -6506787 + R1_DM LINE R1 2880 3538 -1818 1 756 4705 55 0 3 chrUextra 22497969 22498630 -6506026 + BATUMI_I LTR Pao 5867 6767 -1147 1 756 1034 68 27 64 chrUextra 22498730 22498918 -6505738 - Gypsy12_I LTR Gypsy -5365 181 1 1 756 2530 120 15 49 chrUextra 22498918 22499391 -6505265 - Gypsy12_LTR LTR Gypsy 0 2336 1880 1 756 2242 177 8 8 chrUextra 22499491 22499998 -6504658 + SAR_DM Satellite Satellite 304 810 -662 1 756 1012 68 7 0 chrUextra 22500003 22500149 -6504507 - ARS406_DM Unknown Unknown -164 189 43 1 756 2996 163 14 11 chrUextra 22501016 22501674 -6502982 + SAR_DM Satellite Satellite 369 1028 -444 1 756 5397 26 0 0 chrUextra 22502535 22503196 -6501460 + R1_DM LINE R1 2481 3141 -2215 1 756 31 26 0 0 chrUextra 22503296 22503334 -6501322 + AT_rich Low_complexity Low_complexity 1 38 0 1 756 5679 3 0 0 chrUextra 22504057 22504718 -6499938 + DMRT1B LINE R1 4138 4798 -385 1 756 5648 0 1 0 chrUextra 22504818 22505479 -6499177 + ROO_I LTR Pao 1824 2485 -5771 1 756 819 75 0 17 chrUextra 22505580 22506214 -6498442 + RSP Satellite Satellite 1 623 0 1 756 244 167 19 0 chrUextra 22506340 22506394 -6498262 + XDMR Unknown Unknown 307 361 0 1 756 2668 194 5 17 chrUextra 22506348 22506997 -6497659 - SAR_DM Satellite Satellite -361 1111 471 1 756 5643 5 1 0 chrUextra 22507100 22507760 -6496896 - R1_DM LINE R1 -269 5087 4427 1 756 1049 34 0 7 chrUextra 22507860 22508008 -6496648 + NTS_DM Other Other 55 201 -39 1 756 854 18 0 27 chrUextra 22508060 22508172 -6496484 + NTS_DM Other Other 25 133 -107 1 756 1088 43 0 24 chrUextra 22508172 22508340 -6496316 + NTS_DM Other Other 38 201 -39 1 756 21 57 0 0 chrUextra 22508340 22508375 -6496281 + AT_rich Low_complexity Low_complexity 1 35 0 1 756 778 28 9 27 chrUextra 22508401 22508512 -6496144 + NTS_DM Other Other 25 133 -107 1 756 1732 19 0 0 chrUextra 22508620 22508825 -6495831 + CIRCE LINE Composite 6152 6356 0 1 756 3712 26 9 0 chrUextra 22508825 22509280 -6495376 + CIRCE LINE Composite 1 459 -5897 1 756 2486 81 18 38 chrUextra 22509380 22510040 -6494616 + DMSAT6 Satellite Satellite 1 646 -28 1 756 34 24 0 0 chrUextra 22510370 22510411 -6494245 + AT_rich Low_complexity Low_complexity 1 41 0 1 756 880 0 0 0 chrUextra 22510699 22510800 -6493856 + LSU-rRNA_Dme rRNA rRNA 1 101 -3799 1 756 3657 71 71 23 chrUextra 22510900 22511560 -6493096 + STALKER4_I LTR Gypsy 757 1448 -5082 1 756 3240 45 2 0 chrUextra 22511660 22512108 -6492548 - IDEFIX_I LTR Gypsy -295 5333 4885 1 756 1393 74 32 0 chrUextra 22512103 22512320 -6492336 - IDEFIX_I LTR Gypsy -1646 3982 3759 1 756 1285 0 0 0 chrUextra 22512420 22512567 -6492089 + LSU-rRNA_Dme rRNA rRNA 3754 3900 0 1 756 22 56 0 0 chrUextra 22512639 22512675 -6491981 + AT_rich Low_complexity Low_complexity 1 36 0 1 756 246 150 0 0 chrUextra 22512680 22512720 -6491936 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 756 246 150 0 0 chrUextra 22512772 22512812 -6491844 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 756 246 150 0 0 chrUextra 22512864 22512904 -6491752 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 756 255 125 0 0 chrUextra 22512947 22512987 -6491669 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 756 22 56 0 0 chrUextra 22513000 22513036 -6491620 + AT_rich Low_complexity Low_complexity 1 36 0 1 756 726 133 8 0 chrUextra 22513182 22513310 -6491346 + ARS406_DM Unknown Unknown 61 189 -164 1 756 2862 296 52 12 chrUextra 22513213 22514599 -6490057 - SAR_DM Satellite Satellite -208 1440 1 1 756 5377 24 1 0 chrUextra 22514700 22515360 -6489296 + R1_DM LINE R1 2627 3287 -2069 1 756 2334 86 11 70 chrUextra 22515460 22516120 -6488536 + DMSAT6 Satellite Satellite 1 620 -97 1 756 1620 4 0 0 chrUextra 22516610 22516880 -6487776 + (TTTTG)n Simple_repeat Simple_repeat 1 270 0 1 756 3131 154 17 15 chrUextra 22516980 22517638 -6487018 - SAR_DM Satellite Satellite -444 1028 370 1 756 1233 120 29 267 chrUextra 22517740 22518400 -6486256 + MAX_I LTR Pao 968 1470 -6444 1 756 2823 181 5 6 chrUextra 22518500 22519132 -6485524 - SAR_DM Satellite Satellite -647 825 195 1 756 721 116 0 0 chrUextra 22519039 22519160 -6485496 + ARS406_DM Unknown Unknown 1 121 -232 1 756 2857 142 36 1 chrUextra 22519262 22519920 -6484736 + DM297_I LTR Gypsy 2931 3694 -2473 1 756 28 48 0 0 chrUextra 22520341 22520383 -6484273 + AT_rich Low_complexity Low_complexity 1 42 0 1 756 2317 103 14 18 chrUextra 22520810 22521440 -6483216 - DMSAT6 Satellite Satellite 0 627 1 1 756 5366 20 1 1 chrUextra 22521540 22522200 -6482456 + R1_DM LINE R1 3398 4057 -1299 1 756 1025 320 25 19 chrUextra 22522300 22522871 -6481785 + GTWIN_I LTR Gypsy 4314 4887 -1534 1 756 5782 1 0 0 chrUextra 22523060 22523720 -6480936 - LINEJ1_DM LINE Jockey -2995 2025 1366 1 756 5318 34 0 8 chrUextra 22523820 22524480 -6480176 - BATUMI_I LTR Pao -1655 6308 5654 1 756 1660 5 34 0 chrUextra 22524580 22524785 -6479871 + DOC2_DM LINE Jockey 390 601 -4192 1 756 3612 5 0 0 chrUextra 22524785 22525209 -6479447 + Stalker2_LTR LTR Gypsy 1 424 0 1 756 230 32 0 0 chrUextra 22525209 22525240 -6479416 + Stalker2_I LTR Gypsy 1 31 -7371 1 756 2114 8 0 0 chrUextra 22525343 22525588 -6479068 + G5_DM LINE Jockey 3571 3815 -1041 1 756 3393 38 2 0 chrUextra 22525578 22526000 -6478656 + G5_DM LINE Jockey 3973 4395 -461 1 756 529 44 0 0 chrUextra 22526101 22526169 -6478487 + SSU-rRNA_Dme rRNA rRNA 1928 1995 0 1 756 26 64 0 0 chrUextra 22527736 22527783 -6476873 + AT_rich Low_complexity Low_complexity 1 47 0 1 756 3713 0 2 0 chrUextra 22527855 22528280 -6476376 - LSU-rRNA_Dme rRNA rRNA 0 3900 3475 1 756 1561 5 0 5 chrUextra 22528380 22528572 -6476084 - NTS_DM Other Other -49 191 1 1 756 1734 21 17 17 chrUextra 22528572 22528812 -6475844 - NTS_DM Other Other 0 240 1 1 756 1637 18 18 18 chrUextra 22528812 22529040 -6475616 - NTS_DM Other Other 0 240 13 1 756 3654 5 0 0 chrUextra 22529140 22529561 -6475095 + Gypsy4_I LTR Gypsy 5868 6288 0 1 756 1760 22 8 46 chrUextra 22529561 22529800 -6474856 + Gypsy4_LTR LTR Gypsy 1 230 -57 1 756 5538 9 1 1 chrUextra 22529900 22530560 -6474096 + R1_DM LINE R1 3250 3909 -1447 1 756 2600 196 16 21 chrUextra 22530660 22531316 -6473340 - SAR_DM Satellite Satellite -667 652 1 1 756 5571 5 0 1 chrUextra 22531420 22532080 -6472576 + STALKER4_I LTR Gypsy 1560 2218 -4312 1 756 1948 204 14 6 chrUextra 22532181 22532838 -6471818 - SAR_DM Satellite Satellite -980 662 1 1 756 2361 103 187 0 chrUextra 22533075 22533540 -6471116 + ZAM_I LTR Gypsy 2418 2969 -4521 1 756 342 102 0 0 chrUextra 22533540 22533599 -6471057 + ZAM_I LTR Gypsy 2905 2963 -4527 1 756 5560 5 0 5 chrUextra 22533700 22534360 -6470296 + R1_DM LINE R1 4342 4998 -358 1 756 2757 175 17 9 chrUextra 22534460 22535099 -6469557 - SAR_DM Satellite Satellite -503 969 326 1 756 5361 21 11 6 chrUextra 22535220 22535880 -6468776 + FW_DM LINE Jockey 2041 2703 -1989 1 756 789 30 10 10 chrUextra 22535980 22536082 -6468574 + PROTOP DNA P 4379 4480 0 1 756 26 30 0 0 chrUextra 22536432 22536465 -6468191 + AT_rich Low_complexity Low_complexity 1 33 0 1 756 2704 173 32 21 chrUextra 22536740 22537397 -6467259 + SAR_DM Satellite Satellite 298 961 -511 1 756 5461 3 0 1 chrUextra 22537500 22538160 -6466496 + ROO_I LTR Pao 777 1435 -6821 1 756 2312 187 75 11 chrUextra 22538260 22538897 -6465759 - SAR_DM Satellite Satellite -549 923 246 1 756 347 113 0 16 chrUextra 22538857 22538920 -6465736 + ARS406_DM Unknown Unknown 1 62 -291 1 756 1627 19 14 5 chrUextra 22539027 22539240 -6465416 - NTS_DM Other Other -25 215 1 1 756 1734 21 17 17 chrUextra 22539240 22539480 -6465176 - NTS_DM Other Other 0 240 1 1 756 1334 20 20 25 chrUextra 22539480 22539680 -6464976 - NTS_DM Other Other 0 240 42 1 756 5291 31 1 0 chrUextra 22539780 22540426 -6464230 + CIRCE LINE Composite 5527 6173 -183 1 756 5650 0 1 5 chrUextra 22540540 22541200 -6463456 - SSU-rRNA_Dme rRNA rRNA -641 1354 697 1 756 780 102 0 0 chrUextra 22541300 22541427 -6463229 - ARS406_DM Unknown Unknown -226 127 1 1 756 2617 179 14 10 chrUextra 22541334 22541960 -6462696 + SAR_DM Satellite Satellite 195 823 -649 1 756 450 200 0 0 chrUextra 22542073 22542168 -6462488 + BS2 LINE Jockey 2690 2784 -1937 1 756 2851 52 59 0 chrUextra 22542164 22542571 -6462085 + DOC3_DM LINE Jockey 1360 1790 -2950 1 756 5473 6 1 1 chrUextra 22542820 22543480 -6461176 - R1_DM LINE R1 -4034 1322 663 1 756 1539 0 0 0 chrUextra 22543580 22543751 -6460905 + (GAGAA)n Simple_repeat Simple_repeat 2 172 0 1 94 3102 156 15 9 chrUextra 22544340 22544999 -6459657 + SAR_DM Satellite Satellite 346 1008 -464 1 757 803 271 63 54 chrUextra 22545110 22545758 -6458898 - TABOR_I LTR Gypsy -3369 3528 2344 1 757 718 0 0 0 chrUextra 22545860 22545948 -6458708 + LSU-rRNA_Dme rRNA rRNA 2311 2398 -1502 1 757 4981 2 0 2 chrUextra 22545945 22546520 -6458136 + LSU-rRNA_Dme rRNA rRNA 2586 3159 -741 1 757 3078 166 9 8 chrUextra 22546623 22547280 -6457376 + SAR_DM Satellite Satellite 369 1026 -446 1 757 1448 17 0 0 chrUextra 22548140 22548314 -6456342 - Copia_I LTR Copia -103 4490 4317 1 757 4097 0 0 0 chrUextra 22548314 22548800 -6455856 - Copia_I LTR Copia -2805 1788 1303 1 757 4822 67 0 5 chrUextra 22548900 22549560 -6455096 + IDEFIX_I LTR Gypsy 2419 3075 -2553 1 757 5681 1 0 0 chrUextra 22549660 22550320 -6454336 - ROO_I LTR Pao -6413 1843 1184 1 757 3094 165 8 8 chrUextra 22550420 22551078 -6453578 + SAR_DM Satellite Satellite 380 1037 -435 1 757 5531 5 52 0 chrUextra 22551180 22551840 -6452816 - Copia2_I LTR Copia -573 3589 2896 1 757 34 24 0 0 chrUextra 22552347 22552388 -6452268 + AT_rich Low_complexity Low_complexity 1 41 0 1 757 2504 93 18 8 chrUextra 22552700 22553360 -6451296 - DMSAT6 Satellite Satellite -40 666 1 1 757 2346 181 14 8 chrUextra 22553479 22554120 -6450536 - SAR_DM Satellite Satellite -411 645 1 1 757 2525 211 10 12 chrUextra 22554220 22554880 -6449776 + SAR_DM Satellite Satellite 1 658 -396 1 757 5480 14 0 0 chrUextra 22554980 22555640 -6449016 + ROO_I LTR Pao 5440 6099 -2157 1 757 5830 6 0 1 chrUextra 22555740 22556400 -6448256 - DMRT1B LINE R1 -139 5044 4386 1 757 24 100 0 0 chrUextra 22557080 22557160 -6447496 + AT_rich Low_complexity Low_complexity 1 80 0 1 757 894 10 0 0 chrUextra 22557817 22557920 -6446736 + (CAATA)n Simple_repeat Simple_repeat 2 104 0 1 757 907 9 0 27 chrUextra 22558039 22558151 -6446505 - NTS_DM Other Other -107 133 25 1 757 1304 18 0 6 chrUextra 22558204 22558369 -6446287 - NTS_DM Other Other -39 201 38 1 757 907 9 0 27 chrUextra 22558369 22558481 -6446175 - NTS_DM Other Other -107 133 25 1 757 1090 20 0 7 chrUextra 22558533 22558680 -6445976 - NTS_DM Other Other -39 201 56 1 757 277 106 0 21 chrUextra 22559120 22559168 -6445488 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 757 372 49 65 16 chrUextra 22559190 22559252 -6445404 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 757 746 193 0 7 chrUextra 22559251 22559397 -6445259 - DMLTR5 LTR Gypsy 0 266 122 1 757 3019 181 6 8 chrUextra 22559540 22560181 -6444475 + SAR_DM Satellite Satellite 437 1076 -396 1 757 833 0 0 0 chrUextra 22560300 22560396 -6444260 + ROO_LTR LTR Pao 333 428 0 1 757 4923 0 0 3 chrUextra 22560396 22560960 -6443696 - ROO_I LTR Pao -2042 6214 5653 1 757 522 197 8 0 chrUextra 22561061 22561178 -6443478 - ARS406_DM Unknown Unknown -235 118 1 1 757 1082 176 43 6 chrUextra 22561073 22561709 -6442947 + SAR_DM Satellite Satellite 1 659 -680 1 757 5657 15 0 14 chrUextra 22561820 22562480 -6442176 + FW_DM LINE Jockey 1709 2359 -2333 1 757 2814 187 9 20 chrUextra 22562580 22563235 -6441421 - SAR_DM Satellite Satellite -371 1101 454 1 757 5664 26 0 0 chrUextra 22563340 22564000 -6440656 + R1_DM LINE R1 2296 2955 -2401 1 757 5774 0 1 0 chrUextra 22564100 22564760 -6439896 - ROO_I LTR Pao -3169 5087 4427 1 757 2269 15 0 0 chrUextra 22564860 22565119 -6439537 + CIRCE LINE Composite 712 970 -5386 1 757 1687 60 0 100 chrUextra 22565261 22565520 -6439136 + CIRCE LINE Composite 973 1205 -5151 1 757 238 128 26 0 chrUextra 22565624 22565663 -6438993 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 757 22 56 0 0 chrUextra 22565676 22565712 -6438944 + AT_rich Low_complexity Low_complexity 1 36 0 1 757 907 9 0 27 chrUextra 22565738 22565850 -6438806 + NTS_DM Other Other 25 133 -107 1 757 1304 18 0 6 chrUextra 22565850 22566015 -6438641 + NTS_DM Other Other 38 201 -39 1 757 907 9 0 27 chrUextra 22566067 22566179 -6438477 + NTS_DM Other Other 25 133 -107 1 757 840 20 0 0 chrUextra 22566179 22566280 -6438376 + NTS_DM Other Other 38 138 -102 1 757 2498 107 63 8 chrUextra 22566380 22567033 -6437623 - DMSAT6 Satellite Satellite -355 689 1 1 757 5885 15 0 0 chrUextra 22568660 22569320 -6435336 - DMRT1A LINE R1 -1219 3964 3305 1 757 5444 15 6 1 chrUextra 22569420 22570080 -6434576 + PROTOP DNA P 3386 4048 -432 1 757 514 119 36 0 chrUextra 22570302 22570386 -6434270 - NTS_DM Other Other -150 90 4 1 757 1355 6 0 18 chrUextra 22570496 22570661 -6433995 - NTS_DM Other Other -78 162 1 1 757 1281 6 28 17 chrUextra 22570661 22570840 -6433816 - NTS_DM Other Other 0 240 60 1 757 2661 99 174 8 chrUextra 22571113 22571600 -6433056 - DNAREP1_DM LINE Penelope -9 585 18 1 757 3024 176 8 9 chrUextra 22571704 22572356 -6432300 - SAR_DM Satellite Satellite -610 862 212 1 757 578 13 26 0 chrUextra 22572460 22572538 -6432118 + NTS_DM Other Other 54 133 -107 1 757 851 0 0 0 chrUextra 22572538 22572634 -6432022 + NTS_DM Other Other 38 133 -107 1 757 1472 20 20 20 chrUextra 22572634 22572837 -6431819 + NTS_DM Other Other 38 240 0 1 757 1794 25 17 17 chrUextra 22572837 22573077 -6431579 + NTS_DM Other Other 1 240 0 1 757 375 23 0 0 chrUextra 22573077 22573120 -6431536 + NTS_DM Other Other 1 43 -197 1 757 3036 181 9 9 chrUextra 22573220 22573877 -6430779 + SAR_DM Satellite Satellite 267 923 -549 1 757 613 116 11 0 chrUextra 22574006 22574101 -6430555 + DMCR1A LINE CR1 365 460 -4010 1 757 3594 30 4 52 chrUextra 22574120 22574640 -6430016 + DOC5_DM LINE Jockey 3979 4473 -209 1 757 600 15 0 0 chrUextra 22574740 22574807 -6429849 - NTS_DM Other Other -173 67 1 1 757 1463 20 20 25 chrUextra 22574807 22575011 -6429645 - NTS_DM Other Other 0 240 38 1 757 893 18 0 27 chrUextra 22575012 22575124 -6429532 - NTS_DM Other Other -107 133 25 1 757 1291 24 0 6 chrUextra 22575176 22575341 -6429315 - NTS_DM Other Other -39 201 38 1 757 452 17 0 0 chrUextra 22575341 22575400 -6429256 - NTS_DM Other Other -107 133 75 1 757 1746 21 21 21 chrUextra 22575510 22575750 -6428906 - NTS_DM Other Other 0 240 1 1 757 1472 20 20 20 chrUextra 22575750 22575953 -6428703 - NTS_DM Other Other 0 240 38 1 757 851 0 0 0 chrUextra 22575953 22576049 -6428607 - NTS_DM Other Other -107 133 38 1 757 850 19 9 27 chrUextra 22576049 22576160 -6428496 - NTS_DM Other Other -107 133 25 1 757 27 29 0 0 chrUextra 22576513 22576547 -6428109 + AT_rich Low_complexity Low_complexity 1 34 0 1 757 261 33 0 0 chrUextra 22576786 22576816 -6427840 + Baggins1 LINE LOA 4727 4756 -697 1 757 567 83 104 0 chrUextra 22576824 22576920 -6427736 - FB4_DM DNA Tc1 -3907 182 77 1 757 498 18 0 0 chrUextra 22577020 22577076 -6427580 - NTS_DM Other Other -184 56 1 1 757 1825 25 12 17 chrUextra 22577076 22577317 -6427339 - NTS_DM Other Other 0 240 1 1 757 1835 17 17 17 chrUextra 22577317 22577557 -6427099 - NTS_DM Other Other 0 240 1 1 757 753 34 32 32 chrUextra 22577557 22577680 -6426976 - NTS_DM Other Other 0 240 118 1 757 1642 101 283 19 chrUextra 22577780 22578282 -6426374 - R1-2_DM LINE R1 -2624 592 1 1 757 5524 30 3 0 chrUextra 22578541 22579199 -6425457 + NINJA_I LTR Pao 1594 2253 -3758 1 757 10830 99 8 8 chrUextra 22579300 22580720 -6423936 + R1_DM LINE R1 1178 2598 -2758 1 757 3096 169 32 12 chrUextra 22580821 22581480 -6423176 - SAR_DM Satellite Satellite -416 1056 385 1 757 1090 271 8 11 chrUextra 22581588 22581921 -6422735 + Gypsy6_I LTR Gypsy 6536 6840 -172 1 757 254 286 0 0 chrUextra 22581905 22581975 -6422681 + Gypsy2_I LTR Gypsy 5975 6044 -91 1 757 297 184 48 58 chrUextra 22581989 22582093 -6422563 + Gypsy2_LTR LTR Gypsy 95 197 -156 1 757 2873 176 22 9 chrUextra 22583111 22583760 -6420896 + SAR_DM Satellite Satellite 167 823 -649 1 757 5263 24 9 5 chrUextra 22583860 22584520 -6420136 - PROTOP_A DNA P -358 747 85 1 757 2913 192 26 6 chrUextra 22584620 22585280 -6419376 + SAR_DM Satellite Satellite 341 1013 -459 1 757 3005 183 8 8 chrUextra 22585380 22586035 -6418621 - SAR_DM Satellite Satellite -626 846 192 1 757 952 70 7 19 chrUextra 22586140 22586800 -6417856 + RSP Satellite Satellite 1 652 0 1 757 5388 24 6 5 chrUextra 22586900 22587560 -6417096 + PROTOP_A DNA P 28 688 -417 1 757 21 89 0 0 chrUextra 22587831 22587887 -6416769 + AT_rich Low_complexity Low_complexity 1 56 0 1 757 3716 0 2 5 chrUextra 22587906 22588320 -6416336 - SSU-rRNA_Dme rRNA rRNA 0 1995 1583 1 757 5225 11 3 1 chrUextra 22588424 22589074 -6415582 - FB4_DM DNA Tc1 -633 3456 2806 1 757 4607 0 33 0 chrUextra 22589180 22589732 -6414924 + ROO_I LTR Pao 7687 8256 0 1 757 928 9 0 0 chrUextra 22589732 22589840 -6414816 + ROO_LTR LTR Pao 1 108 -320 1 757 5741 6 0 3 chrUextra 22590700 22591360 -6413296 - Gypsy4_I LTR Gypsy -913 5375 4718 1 757 2984 172 14 20 chrUextra 22591460 22592118 -6412538 + SAR_DM Satellite Satellite 284 937 -535 1 757 989 75 9 23 chrUextra 22592235 22592880 -6411776 - RSP Satellite Satellite 0 636 1 1 757 5537 12 64 1 chrUextra 22592980 22593640 -6411016 - R1_DM LINE R1 -1317 4039 3339 1 757 627 37 0 0 chrUextra 22593740 22593821 -6410835 + ARS406_DM Unknown Unknown 78 158 -195 1 757 3559 272 43 28 chrUextra 22593821 22595160 -6409496 - SAR_DM Satellite Satellite -208 1359 1 1 757 5838 12 1 0 chrUextra 22595260 22595919 -6408737 + MICROPIA_I LTR Gypsy 655 1314 -3162 1 757 4504 6 1 1 chrUextra 22596020 22596680 -6407976 - DM412B_LTR LTR Gypsy -62 509 1 1 757 5475 18 68 1 chrUextra 22596780 22597440 -6407216 + R1_DM LINE R1 3156 3859 -1497 1 757 1212 15 0 0 chrUextra 22597799 22597934 -6406722 - 5S_DM RNA RNA 0 135 1 1 757 3117 171 8 14 chrUextra 22598309 22598960 -6405696 - SAR_DM Satellite Satellite -396 1076 430 1 757 1022 109 0 0 chrUextra 22599060 22599198 -6405458 + Gypsy12_I LTR Gypsy 1684 1821 -3725 1 757 3707 83 50 15 chrUextra 22599195 22599720 -6404936 + Gypsy12_I LTR Gypsy 4465 5007 -539 1 757 246 32 0 0 chrUextra 22600748 22600779 -6403877 + (GA)n Simple_repeat Simple_repeat 2 32 0 1 757 541 208 16 16 chrUextra 22600779 22600906 -6403750 + HETRP_DM Satellite Satellite 1549 1675 -197 1 757 192 40 0 0 chrUextra 22601059 22601084 -6403572 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 757 495 224 16 16 chrUextra 22601084 22601211 -6403445 + HETRP_DM Satellite Satellite 1549 1675 -197 1 757 3069 188 8 6 chrUextra 22601340 22602000 -6402656 - SAR_DM Satellite Satellite -552 920 260 1 757 342 0 0 0 chrUextra 22602100 22602138 -6402518 + (TTCTC)n Simple_repeat Simple_repeat 4 41 0 1 757 5705 11 1 5 chrUextra 22602860 22603520 -6401136 - Gypsy4_I LTR Gypsy -4625 1663 1006 1 757 5958 3 0 0 chrUextra 22603620 22604280 -6400376 - R1_DM LINE R1 -1664 3692 3033 1 757 21 57 0 0 chrUextra 22604401 22604436 -6400220 + AT_rich Low_complexity Low_complexity 1 35 0 1 757 1274 18 0 12 chrUextra 22604436 22604602 -6400054 - NTS_DM Other Other -39 201 38 1 757 907 9 0 27 chrUextra 22604602 22604714 -6399942 - NTS_DM Other Other -107 133 25 1 757 1304 18 0 6 chrUextra 22604766 22604931 -6399725 - NTS_DM Other Other -39 201 38 1 757 888 28 0 0 chrUextra 22604931 22605039 -6399617 - NTS_DM Other Other -107 133 26 1 757 3078 169 17 8 chrUextra 22605151 22605799 -6398857 + SAR_DM Satellite Satellite 326 979 -493 1 757 5066 46 8 1 chrUextra 22605900 22606560 -6398096 - HETA LINE telomeric -1090 4991 4328 1 757 4139 4 0 6 chrUextra 22606661 22607137 -6397519 + BATUMI_I LTR Pao 7491 7963 0 1 757 1369 28 0 38 chrUextra 22607137 22607320 -6397336 + BATUMI_I LTR Pao 7002 7177 -786 1 757 344 188 50 29 chrUextra 22607421 22607557 -6397099 + TART LINE telomeric 6004 6105 -8372 1 757 1704 108 168 7 chrUextra 22607585 22608032 -6396624 + TART LINE telomeric 6734 7252 -7225 1 757 582 49 0 0 chrUextra 22608183 22608265 -6396391 + MDG1_I LTR Gypsy 6170 6251 -345 1 757 786 43 226 73 chrUextra 22608265 22608442 -6396214 + MDG1_I LTR Gypsy 6393 6596 0 1 757 383 68 17 0 chrUextra 22608461 22608520 -6396136 + (TAA)n Simple_repeat Simple_repeat 3 62 0 1 757 1941 105 10 3 chrUextra 22608532 22608820 -6395836 + MDG1_LTR LTR Gypsy 123 412 -30 1 757 3116 177 9 9 chrUextra 22608940 22609600 -6395056 - SAR_DM Satellite Satellite -471 1001 342 1 757 5592 20 18 1 chrUextra 22609700 22610360 -6394296 + DOC2_DM LINE Jockey 1488 2158 -2635 1 757 5882 0 3 3 chrUextra 22610464 22611120 -6393536 + SSU-rRNA_Dme rRNA rRNA 708 1363 -632 1 757 2952 171 29 12 chrUextra 22611222 22611878 -6392778 - SAR_DM Satellite Satellite -464 1008 342 1 757 28 48 0 0 chrUextra 22612042 22612084 -6392572 + AT_rich Low_complexity Low_complexity 1 42 0 1 757 32 0 0 0 chrUextra 22612412 22612444 -6392212 + AT_rich Low_complexity Low_complexity 1 32 0 1 757 558 0 0 0 chrUextra 22612576 22612640 -6392016 + SSU-rRNA_Dme rRNA rRNA 1 64 -1931 1 757 2224 65 28 3 chrUextra 22612744 22613068 -6391588 - QUASIMODO_I LTR Gypsy -5699 361 30 1 757 2226 73 0 3 chrUextra 22613075 22613379 -6391277 - QUASIMODO_LTR LTR Gypsy -51 607 305 1 757 4810 20 68 3 chrUextra 22613499 22614158 -6390498 + R1_DM LINE R1 3347 4048 -1308 1 757 4482 71 21 14 chrUextra 22614262 22614915 -6389741 + R1_DM LINE R1 1 658 -4698 1 757 4780 65 15 1 chrUextra 22615017 22615676 -6388980 + TART_B1 LINE telomeric 2725 3392 -7262 1 757 647 139 0 16 chrUextra 22615777 22615901 -6388755 + ARS406_DM Unknown Unknown 38 159 -194 1 757 1259 164 20 27 chrUextra 22615898 22616199 -6388457 - SAR_DM Satellite Satellite -678 794 496 1 757 943 166 27 31 chrUextra 22616211 22616435 -6388221 - SAR_DM Satellite Satellite -684 788 566 1 757 2426 120 11 29 chrUextra 22616542 22617194 -6387462 - DMSAT6 Satellite Satellite 0 640 1 1 757 1214 304 28 48 chrUextra 22618062 22618709 -6385947 + Invader6_I LTR Gypsy 1578 2211 -1888 1 757 5732 3 0 1 chrUextra 22618812 22619471 -6385185 - SSU-rRNA_Dme rRNA rRNA -1319 676 19 1 757 1042 21 0 7 chrUextra 22619571 22619717 -6384939 + NTS_DM Other Other 57 201 -39 1 757 21 57 0 0 chrUextra 22619717 22619752 -6384904 + AT_rich Low_complexity Low_complexity 1 35 0 1 757 870 9 0 27 chrUextra 22619778 22619890 -6384766 + NTS_DM Other Other 25 133 -107 1 757 1252 18 0 6 chrUextra 22619890 22620055 -6384601 + NTS_DM Other Other 38 201 -39 1 757 21 57 0 0 chrUextra 22620055 22620090 -6384566 + AT_rich Low_complexity Low_complexity 1 35 0 1 757 811 19 9 27 chrUextra 22620116 22620227 -6384429 + NTS_DM Other Other 25 133 -107 1 757 643 314 62 43 chrUextra 22620337 22620983 -6383673 + MDG1_I LTR Gypsy 2081 2738 -3858 1 757 3458 253 25 32 chrUextra 22621094 22623266 -6381390 - SAR_DM Satellite Satellite -435 2157 1 1 757 2456 108 114 37 chrUextra 22623529 22624019 -6380637 + Gypsy12_I LTR Gypsy 223 750 -4796 1 757 2822 0 0 68 chrUextra 22624884 22625254 -6379402 - LSU-rRNA_Dme rRNA rRNA -3555 345 1 1 757 21 95 0 0 chrUextra 22625266 22625329 -6379327 + AT_rich Low_complexity Low_complexity 1 63 0 1 757 2797 176 14 11 chrUextra 22625643 22626302 -6378354 + SAR_DM Satellite Satellite 296 956 -516 1 757 245 125 46 15 chrUextra 22626920 22626985 -6377671 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 757 5424 0 2 2 chrUextra 22627196 22627820 -6376836 - SSU-rRNA_Dme rRNA rRNA 0 1995 1372 1 757 2337 76 34 52 chrUextra 22627920 22628579 -6376077 - DMSAT6 Satellite Satellite -83 646 1 1 757 5756 3 1 0 chrUextra 22628679 22629338 -6375318 - LSU-rRNA_Dme rRNA rRNA -275 3625 2966 1 757 5463 5 0 0 chrUextra 22629466 22630097 -6374559 + LSU-rRNA_Dme rRNA rRNA 1788 2418 -1482 1 757 5427 12 1 0 chrUextra 22630197 22630856 -6373800 + STALKER4_I LTR Gypsy 5258 5917 -613 1 757 1301 6 0 18 chrUextra 22631039 22631204 -6373452 - NTS_DM Other Other -78 162 1 1 757 1811 13 17 13 chrUextra 22631204 22631443 -6373213 - NTS_DM Other Other 0 240 1 1 757 1232 0 23 17 chrUextra 22631443 22631615 -6373041 - NTS_DM Other Other 0 240 68 1 757 5353 3 36 0 chrUextra 22631715 22632372 -6372284 + Invader2_I LTR Gypsy 3524 4204 -388 1 757 2501 23 13 0 chrUextra 22632474 22632779 -6371877 - CIRCE LINE Composite -6047 309 1 1 757 2916 31 0 0 chrUextra 22632779 22633133 -6371523 - CIRCE LINE Composite 0 6356 6003 1 757 2222 99 9 35 chrUextra 22633233 22633892 -6370764 + DMSAT6 Satellite Satellite 1 641 0 1 757 1413 58 0 0 chrUextra 22633992 22634197 -6370459 - BATUMI_I LTR Pao -456 7507 7303 1 757 3145 38 14 12 chrUextra 22634220 22634651 -6370005 + BATUMI_I LTR Pao 6427 6858 -1105 1 757 2600 181 6 27 chrUextra 22634770 22635406 -6369250 - SAR_DM Satellite Satellite -354 1118 496 1 757 4892 61 1 6 chrUextra 22635510 22636169 -6368487 + BATUMI_I LTR Pao 3496 4151 -3812 1 757 1650 5 0 0 chrUextra 22636269 22636459 -6368197 + Invader2_LTR LTR Gypsy 77 266 0 1 757 3673 15 2 0 chrUextra 22636459 22636928 -6367728 + Invader2_I LTR Gypsy 1 470 -4122 1 757 5693 1 0 0 chrUextra 22637787 22638446 -6366210 + R1_DM LINE R1 1317 1975 -3381 1 757 2412 201 30 5 chrUextra 22638546 22639185 -6365471 - SAR_DM Satellite Satellite -487 985 331 1 757 2090 4 0 0 chrUextra 22639305 22639544 -6365112 + Gypsy6_I LTR Gypsy 6774 7012 0 1 757 2282 74 32 20 chrUextra 22639546 22639954 -6364702 + Gypsy6A_LTR LTR Gypsy 1 412 -8 1 757 1724 14 0 5 chrUextra 22640064 22640275 -6364381 - STALKER4_LTR LTR Gypsy -192 210 1 1 757 3167 18 9 18 chrUextra 22640275 22640723 -6363933 - STALKER4_I LTR Gypsy 0 6530 6087 1 757 1933 173 19 6 chrUextra 22640823 22641463 -6363193 + SAR_DM Satellite Satellite 1 647 -645 1 757 4326 12 0 0 chrUextra 22641582 22642098 -6362558 - STALKER4_I LTR Gypsy -1585 4945 4430 1 757 1175 14 0 0 chrUextra 22642102 22642241 -6362415 - STALKER4_I LTR Gypsy -2364 4166 4028 1 757 2076 114 90 78 chrUextra 22642361 22642511 -6362145 + FB4_DM DNA Tc1 173 321 -3768 1 757 199 0 31 31 chrUextra 22642511 22642543 -6362113 + (TTA)n Simple_repeat Simple_repeat 2 33 0 1 757 2076 114 90 78 chrUextra 22642543 22642927 -6361729 + FB4_DM DNA Tc1 322 713 -3376 1 757 430 82 0 0 chrUextra 22642928 22642989 -6361667 - FB4_DM DNA Tc1 -4027 62 2 1 757 1321 222 84 75 chrUextra 22643102 22643759 -6360897 - Gypsy12A_LTR LTR Gypsy -178 2102 1440 1 757 4484 60 69 0 chrUextra 22643867 22644517 -6360139 + DM297_I LTR Gypsy 2910 3604 -2563 1 757 4565 67 4 5 chrUextra 22644625 22645277 -6359379 + BATUMI_I LTR Pao 4315 5125 -2789 1 757 5587 3 0 0 chrUextra 22646136 22646795 -6357861 + DOC LINE Jockey 1576 2234 -2491 1 757 2689 178 8 9 chrUextra 22646896 22647530 -6357126 - SAR_DM Satellite Satellite -645 827 195 1 757 771 86 0 0 chrUextra 22647437 22647554 -6357102 + ARS406_DM Unknown Unknown 1 117 -236 1 757 817 134 129 41 chrUextra 22647654 22647848 -6356808 + Gypsy12A_LTR LTR Gypsy 2070 2280 0 1 757 234 247 43 43 chrUextra 22648220 22648313 -6356343 - DOC3_DM LINE Jockey -2159 2581 2489 1 757 1398 6 0 0 chrUextra 22648413 22648581 -6356075 - ACCORD_I LTR Gypsy -6120 168 1 1 757 4242 4 0 0 chrUextra 22648581 22649072 -6355584 - ACCORD_LTR LTR Gypsy 0 558 68 1 757 28 48 0 0 chrUextra 22649191 22649233 -6355423 + AT_rich Low_complexity Low_complexity 1 42 0 1 757 32 0 0 0 chrUextra 22649561 22649593 -6355063 + AT_rich Low_complexity Low_complexity 1 32 0 1 757 859 0 9 9 chrUextra 22649725 22649831 -6354825 + SSU-rRNA_Dme rRNA rRNA 1 106 -1889 1 757 5344 27 1 0 chrUextra 22649931 22650590 -6354066 + MAX_I LTR Pao 4768 5427 -2487 1 757 2586 192 16 23 chrUextra 22650690 22651349 -6353307 + SAR_DM Satellite Satellite 1 654 -227 1 757 5354 9 2 2 chrUextra 22651468 22652108 -6352548 + R1_DM LINE R1 3726 4365 -991 1 757 2910 169 12 9 chrUextra 22652222 22652867 -6351789 + SAR_DM Satellite Satellite 369 1015 -457 1 757 2797 181 15 9 chrUextra 22652967 22653621 -6351035 - SAR_DM Satellite Satellite -603 869 212 1 757 2346 112 21 63 chrUextra 22653726 22654201 -6350455 + TART LINE telomeric 2908 3362 -11115 1 757 1141 98 0 32 chrUextra 22654196 22654385 -6350271 + TART LINE telomeric 3683 3865 -10612 1 757 3664 18 0 0 chrUextra 22654485 22654923 -6349733 - R1_DM LINE R1 -893 4463 4026 1 757 1677 14 0 24 chrUextra 22654933 22655144 -6349512 - R1_DM LINE R1 -1690 3666 3461 1 757 3054 50 0 5 chrUextra 22655245 22655646 -6349010 + R1_DM LINE R1 193 591 -4765 1 757 2044 26 19 0 chrUextra 22655636 22655903 -6348753 + R1_DM LINE R1 796 1067 -4289 1 757 315 0 0 0 chrUextra 22656003 22656038 -6348618 + (TATTG)n Simple_repeat Simple_repeat 1 35 0 1 757 1314 78 0 0 chrUextra 22656040 22656220 -6348436 + (TTATA)n Simple_repeat Simple_repeat 1 180 0 1 757 1313 56 6 0 chrUextra 22656223 22656402 -6348254 + (TATTG)n Simple_repeat Simple_repeat 1 180 0 1 757 1500 22 0 0 chrUextra 22656419 22656599 -6348057 + (TTATA)n Simple_repeat Simple_repeat 1 180 0 1 757 420 37 0 0 chrUextra 22656608 22656662 -6347994 + (TTCTC)n Simple_repeat Simple_repeat 4 57 0 1 757 5584 11 0 0 chrUextra 22656764 22657421 -6347235 - DOC2_DM LINE Jockey -914 3879 3223 1 757 5643 9 0 0 chrUextra 22657521 22658180 -6346476 + DOC2_DM LINE Jockey 3473 4131 -662 1 757 1664 0 10 0 chrUextra 22658280 22658484 -6346172 - QUASIMODO_LTR LTR Gypsy -452 206 1 1 757 203 164 32 16 chrUextra 22658484 22658546 -6346110 + (TA)n Simple_repeat Simple_repeat 1 63 0 1 757 345 91 0 0 chrUextra 22658867 22658922 -6345734 + PROTOP_A DNA P 219 273 -832 1 757 4510 43 95 0 chrUextra 22659043 22659698 -6344958 - DMCR1A LINE CR1 -1914 2556 1840 1 757 2820 180 14 12 chrUextra 22659800 22660457 -6344199 - SAR_DM Satellite Satellite -369 1103 446 1 757 325 139 81 22 chrUextra 22660557 22660667 -6343989 + TART LINE telomeric 10403 10489 -3988 1 757 287 122 81 30 chrUextra 22660719 22660819 -6343837 + TART LINE telomeric 10421 10489 -3988 1 757 1228 33 0 0 chrUextra 22660959 22661111 -6343545 + PROTOP_B DNA P 1 152 -1001 1 757 492 34 0 0 chrUextra 22661110 22661169 -6343487 + PROTOP_A DNA P 455 513 -592 1 757 5534 18 1 0 chrUextra 22661316 22661975 -6342681 - STALKER4_I LTR Gypsy -2060 4470 3811 1 757 5634 1 0 3 chrUextra 22662075 22662734 -6341922 + R1_DM LINE R1 1405 2061 -3295 1 757 1047 8 0 0 chrUextra 22662834 22662957 -6341699 - NTS_DM Other Other -117 123 1 1 757 1704 21 17 21 chrUextra 22662957 22663198 -6341458 - NTS_DM Other Other 0 240 1 1 757 1408 20 20 20 chrUextra 22663198 22663401 -6341255 - NTS_DM Other Other 0 240 38 1 757 735 22 0 0 chrUextra 22663401 22663493 -6341163 - NTS_DM Other Other -107 133 42 1 757 2679 168 33 12 chrUextra 22663599 22664237 -6340419 - SAR_DM Satellite Satellite -593 879 229 1 757 466 84 0 0 chrUextra 22664181 22664252 -6340404 + ARS406_DM Unknown Unknown 1 71 -282 1 757 997 104 11 11 chrUextra 22664356 22664531 -6340125 + SAR_DM Satellite Satellite 729 903 -569 1 757 1967 185 7 9 chrUextra 22664546 22665010 -6339646 + SAR_DM Satellite Satellite 496 958 -514 1 757 619 296 49 44 chrUextra 22665113 22665349 -6339307 + Gypsy4_I LTR Gypsy 2393 2970 -4552 1 757 1371 47 24 0 chrUextra 22665349 22665562 -6339094 + TLD2 Unknown Unknown 1 218 0 1 757 619 296 49 44 chrUextra 22665562 22665709 -6338947 + Gypsy4_I LTR Gypsy 2971 3335 -4187 1 757 457 70 670 0 chrUextra 22665941 22666056 -6338600 - ROVER-LTR_DM LTR Gypsy -121 246 55 1 757 3571 44 8 0 chrUextra 22666052 22666529 -6338127 - I_DM LINE I -5045 1186 706 1 757 1213 41 90 0 chrUextra 22666629 22666873 -6337783 - PROTOP_B DNA P -399 754 520 1 757 1742 53 0 0 chrUextra 22666860 22667086 -6337570 - PROTOP_A DNA P -806 299 74 1 757 4740 39 0 0 chrUextra 22667388 22668011 -6336645 + I_DM LINE I 564 1186 -5045 1 757 305 25 0 0 chrUextra 22668007 22668047 -6336609 + ROVER-LTR_DM LTR Gypsy 55 94 -273 1 757 4275 85 84 0 chrUextra 22668149 22668806 -6335850 + TART LINE telomeric 946 1657 -12820 1 757 5060 5 0 30 chrUextra 22668906 22669565 -6335091 + ROO_I LTR Pao 402 1040 -7216 1 757 210 37 0 0 chrUextra 22669821 22669848 -6334808 + (GA)n Simple_repeat Simple_repeat 2 28 0 1 757 511 193 16 16 chrUextra 22669848 22669969 -6334687 + HETRP_DM Satellite Satellite 1549 1669 -203 1 757 687 179 6 50 chrUextra 22670113 22670272 -6334384 + HETRP_DM Satellite Satellite 1518 1669 -203 1 757 2843 182 12 8 chrUextra 22670424 22671083 -6333573 - SAR_DM Satellite Satellite -555 917 256 1 757 336 123 0 0 chrUextra 22671183 22671240 -6333416 - ROO_I LTR Pao -2768 5488 5432 1 757 4628 23 47 0 chrUextra 22671222 22671841 -6332815 - ROO_I LTR Pao -2970 5286 4639 1 757 2833 181 12 11 chrUextra 22671942 22672601 -6332055 + SAR_DM Satellite Satellite 272 931 -541 1 757 326 23 0 23 chrUextra 22674226 22674270 -6330386 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 1 757 379 0 19 56 chrUextra 22674978 22675032 -6329624 - NTS_DM Other Other -164 76 25 1 757 1252 18 0 6 chrUextra 22675084 22675249 -6329407 - NTS_DM Other Other -39 201 38 1 757 870 9 0 27 chrUextra 22675249 22675361 -6329295 - NTS_DM Other Other -107 133 25 1 757 22 56 0 0 chrUextra 22675387 22675423 -6329233 + AT_rich Low_complexity Low_complexity 1 36 0 1 94 255 125 0 0 chrUextra 22675436 22675476 -6329180 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 758 246 150 0 0 chrUextra 22675519 22675559 -6329097 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 758 721 0 0 0 chrUextra 22675737 22675819 -6328837 + LSU-rRNA_Dme rRNA rRNA 2570 2651 -1249 1 758 4979 3 0 0 chrUextra 22675817 22676396 -6328260 + R1_DM LINE R1 4708 5286 -70 1 758 1286 28 0 0 chrUextra 22676496 22676673 -6327983 + FW_DM LINE Jockey 4516 4692 0 1 758 3676 46 2 4 chrUextra 22676673 22677155 -6327501 - R1_DM LINE R1 -3963 1393 913 1 758 5680 5 0 0 chrUextra 22677255 22677914 -6326742 + R1_DM LINE R1 3996 4654 -702 1 758 459 0 0 0 chrUextra 22678014 22678065 -6326591 + (CAAAA)n Simple_repeat Simple_repeat 1 51 0 1 758 2572 178 9 22 chrUextra 22678788 22679419 -6325237 - SAR_DM Satellite Satellite -354 1118 496 1 758 3151 62 47 0 chrUextra 22679739 22680191 -6324465 - PROTOP_A DNA P 0 1105 633 1 758 5391 11 26 6 chrUextra 22680291 22680950 -6323706 + R2_DM LINE R2 2619 3290 -317 1 758 518 15 0 0 chrUextra 22681809 22681877 -6322779 + NTS_DM Other Other 66 133 -107 1 758 1202 30 0 6 chrUextra 22681877 22682042 -6322614 + NTS_DM Other Other 38 201 -39 1 758 870 9 0 27 chrUextra 22682094 22682206 -6322450 + NTS_DM Other Other 25 133 -107 1 758 1252 18 0 6 chrUextra 22682206 22682371 -6322285 + NTS_DM Other Other 38 201 -39 1 758 328 0 0 67 chrUextra 22682423 22682468 -6322188 + NTS_DM Other Other 25 66 -174 1 758 306 266 39 24 chrUextra 22682569 22682696 -6321960 - XDMR Unknown Unknown -232 129 1 1 758 2542 177 11 3 chrUextra 22682587 22683153 -6321503 + SAR_DM Satellite Satellite 247 816 -656 1 758 440 208 75 0 chrUextra 22683053 22683173 -6321483 - XDMR Unknown Unknown 0 361 233 1 758 411 127 0 0 chrUextra 22683152 22683223 -6321433 - ARS406_DM Unknown Unknown -282 71 1 1 758 2408 193 11 14 chrUextra 22683327 22683958 -6320698 - SAR_DM Satellite Satellite -649 823 195 1 758 725 107 0 0 chrUextra 22683865 22683986 -6320670 + ARS406_DM Unknown Unknown 1 121 -232 1 758 5717 1 0 1 chrUextra 22684086 22684745 -6319911 - LSU-rRNA_Dme rRNA rRNA -1435 2465 1808 1 758 5227 33 1 0 chrUextra 22684845 22685503 -6319153 + MDG1_I LTR Gypsy 3310 3968 -2628 1 758 2438 80 21 9 chrUextra 22685604 22686263 -6318393 - DMSAT6 Satellite Satellite -34 666 1 1 758 5387 24 1 0 chrUextra 22686365 22687022 -6317634 + FW_DM LINE Jockey 3126 3783 -909 1 758 1287 0 0 0 chrUextra 22687122 22687275 -6317381 + DM176_I LTR Gypsy 6268 6420 0 1 758 2828 55 49 67 chrUextra 22687275 22687779 -6316877 + DM176_LTR LTR Gypsy 1 481 -26 1 758 742 0 0 0 chrUextra 22687881 22687966 -6316690 + R1_DM LINE R1 5272 5356 0 1 758 5005 2 0 2 chrUextra 22687964 22688540 -6316116 + LSU-rRNA_Dme rRNA rRNA 2640 3214 -686 1 758 301 0 0 0 chrUextra 22688640 22688679 -6315977 - DMSAT6 Satellite Satellite -98 372 334 1 758 2432 97 8 33 chrUextra 22688692 22689299 -6315357 - DMSAT6 Satellite Satellite -3 592 1 1 758 2677 167 20 23 chrUextra 22689401 22690051 -6314605 + SAR_DM Satellite Satellite 256 903 -569 1 758 2650 141 1 1 chrUextra 22690171 22690817 -6313839 + G_DM LINE Jockey 635 1280 -762 1 758 2224 78 0 3 chrUextra 22690917 22691215 -6313441 + Gypsy12_I LTR Gypsy 5250 5546 0 1 758 1592 184 14 23 chrUextra 22691214 22691565 -6313091 + Gypsy12_LTR LTR Gypsy 1 348 -1988 1 758 2244 84 5 57 chrUextra 22691676 22692334 -6312322 - DMSAT6 Satellite Satellite -73 623 1 1 758 418 100 0 0 chrUextra 22692436 22692496 -6312160 + DNAREP1_DM LINE Penelope 177 236 -358 1 758 212 0 0 35 chrUextra 22692526 22692555 -6312101 + (TAA)n Simple_repeat Simple_repeat 2 29 0 1 758 5274 15 6 1 chrUextra 22693953 22694612 -6310044 + STALKER4_I LTR Gypsy 2410 3071 -3459 1 758 5753 1 0 0 chrUextra 22695471 22696130 -6308526 + Gypsy4_I LTR Gypsy 5306 5964 -324 1 758 2195 110 18 30 chrUextra 22696230 22696888 -6307768 + DMSAT6 Satellite Satellite 1 649 -3 1 758 5443 15 0 0 chrUextra 22696989 22697648 -6307008 - NINJA_I LTR Pao -4923 1088 430 1 758 4993 31 3 26 chrUextra 22697748 22698407 -6306249 - CIRCE LINE Composite -3488 2868 2225 1 758 5727 1 0 1 chrUextra 22698507 22699166 -6305490 + LSU-rRNA_Dme rRNA rRNA 1860 2517 -1383 1 758 2824 168 12 12 chrUextra 22699272 22699924 -6304732 - SAR_DM Satellite Satellite -396 1076 425 1 758 628 297 47 48 chrUextra 22700030 22700673 -6303983 - SAR_DM Satellite Satellite -576 896 255 1 758 5090 35 1 0 chrUextra 22700788 22701443 -6303213 + MDG1_I LTR Gypsy 2982 3637 -2959 1 758 2601 163 26 43 chrUextra 22701544 22702199 -6302457 + SAR_DM Satellite Satellite 205 848 -624 1 758 4528 96 5 5 chrUextra 22703061 22703720 -6300936 - Gypsy12_I LTR Gypsy -2887 2659 2001 1 758 5402 20 1 3 chrUextra 22703820 22704479 -6300177 + LSU-rRNA_Dme rRNA rRNA 835 1492 -2408 1 758 4533 52 23 6 chrUextra 22704595 22705238 -6299418 + IVK_DM LINE I 1538 2191 -3211 1 758 5582 11 0 0 chrUextra 22705341 22705997 -6298659 - DMRT1A LINE R1 -320 4863 4208 1 758 4167 25 14 4 chrUextra 22706097 22706756 -6297900 + Transib5 DNA Transib 1132 1836 -1165 1 758 3216 131 33 17 chrUextra 22706858 22707458 -6297198 - Stalker2_I LTR Gypsy -6551 851 242 1 758 21 89 0 0 chrUextra 22707979 22708035 -6296621 + AT_rich Low_complexity Low_complexity 1 56 0 1 758 1940 0 0 0 chrUextra 22708054 22708274 -6296382 - SSU-rRNA_Dme rRNA rRNA 0 1995 1776 1 758 2418 16 0 7 chrUextra 22708376 22708680 -6295976 - ROVER-LTR_DM LTR Gypsy -65 302 1 1 758 2746 11 6 3 chrUextra 22708680 22709033 -6295623 - ROVER-I_DM LTR Gypsy 0 6584 6231 1 758 4478 53 154 0 chrUextra 22709136 22709792 -6294864 + TART_B1 LINE telomeric 2744 3500 -7154 1 758 2603 198 11 20 chrUextra 22709894 22710550 -6294106 - SAR_DM Satellite Satellite -662 650 1 1 758 4682 34 53 0 chrUextra 22710651 22711310 -6293346 + R1_DM LINE R1 2262 2955 -2401 1 758 4739 46 15 18 chrUextra 22711410 22712069 -6292587 - R1_DM LINE R1 -4102 1254 598 1 758 2869 170 8 9 chrUextra 22712194 22712828 -6291828 - SAR_DM Satellite Satellite -396 1076 444 1 758 5446 26 0 0 chrUextra 22713687 22714346 -6290310 + BATUMI_I LTR Pao 4673 5331 -2632 1 758 349 289 19 19 chrUextra 22714504 22714666 -6289990 - MDG3_I LTR Gypsy -1562 3424 3263 1 758 322 314 7 7 chrUextra 22714952 22715093 -6289563 - Invader3_I LTR Gypsy -1859 3029 2889 1 758 1409 5 0 112 chrUextra 22715205 22715419 -6289237 - DM176_LTR LTR Gypsy -317 190 1 1 758 191 61 30 0 chrUextra 22715421 22715454 -6289202 + (CATATA)n Simple_repeat Simple_repeat 2 35 0 1 758 326 69 0 79 chrUextra 22715456 22715519 -6289137 + BATUMI_I LTR Pao 712 769 -7194 1 758 1145 114 20 78 chrUextra 22715567 22715862 -6288794 + BATUMI_I LTR Pao 756 1033 -6930 1 758 3149 151 14 9 chrUextra 22715967 22716623 -6288033 + SAR_DM Satellite Satellite 378 1036 -436 1 758 253 348 95 7 chrUextra 22717001 22717296 -6287360 - BLASTOPIA_I LTR Gypsy -1 4480 4160 1 758 3049 162 20 6 chrUextra 22717483 22718141 -6286515 - SAR_DM Satellite Satellite -428 1044 378 1 758 5084 23 1 5 chrUextra 22718241 22718900 -6285756 - IDEFIX_I LTR Gypsy -1570 4058 3402 1 758 1587 5 0 0 chrUextra 22719452 22719657 -6284999 + (TTCTC)n Simple_repeat Simple_repeat 1 205 0 1 758 5396 9 0 0 chrUextra 22719759 22720418 -6284238 + ROO_I LTR Pao 4642 5300 -2956 1 758 2648 175 14 26 chrUextra 22720519 22721169 -6283487 + SAR_DM Satellite Satellite 469 1110 -362 1 758 246 189 0 0 chrUextra 22721124 22721177 -6283479 - XDMR Unknown Unknown 0 361 309 1 758 3185 73 4 73 chrUextra 22721378 22721936 -6282720 + CIRCE LINE Composite 4981 5499 -857 1 758 1659 179 5 9 chrUextra 22722796 22723454 -6281202 + SAR_DM Satellite Satellite 1 654 -558 1 758 1367 25 0 0 chrUextra 22723554 22723717 -6280939 + R1_DM LINE R1 1666 1828 -3528 1 758 2749 41 0 0 chrUextra 22723715 22724060 -6280596 + R1_DM LINE R1 1317 1661 -3695 1 758 1384 30 0 0 chrUextra 22724047 22724213 -6280443 + R1_DM LINE R1 1907 2072 -3284 1 758 2519 189 24 26 chrUextra 22724313 22724972 -6279684 - SAR_DM Satellite Satellite -673 657 1 1 758 2252 100 1 35 chrUextra 22725832 22726490 -6278166 + DMSAT6 Satellite Satellite 1 635 -82 1 758 4717 18 18 21 chrUextra 22726590 22727208 -6277448 - ROO_I LTR Pao -7640 616 1 1 758 332 24 0 0 chrUextra 22727208 22727249 -6277407 - ROO_LTR LTR Pao 0 428 388 1 758 1390 6 0 0 chrUextra 22727367 22727529 -6277127 + DM176_LTR LTR Gypsy 122 283 -224 1 758 2016 20 16 0 chrUextra 22727530 22727783 -6276873 + DM176_LTR LTR Gypsy 251 507 0 1 758 1911 13 0 0 chrUextra 22727783 22728008 -6276648 + DM176_I LTR Gypsy 1 225 -6195 1 758 336 0 0 0 chrUextra 22728108 22728148 -6276508 - TLD3 Unknown Unknown -131 41 2 1 758 1786 271 16 14 chrUextra 22728126 22728766 -6275890 + ROVER-I_DM LTR Gypsy 2576 3216 -3368 1 758 254 306 0 0 chrUextra 22729228 22729313 -6275343 + ACCORD_I LTR Gypsy 1981 2065 -4223 1 758 234 267 22 22 chrUextra 22730587 22730679 -6273977 + (CATA)n Simple_repeat Simple_repeat 2 93 0 1 758 21 0 0 0 chrUextra 22730850 22730871 -6273785 + AT_rich Low_complexity Low_complexity 1 21 0 1 758 3115 25 7 7 chrUextra 22731150 22731556 -6273100 + ROO_I LTR Pao 3800 4205 -4051 1 758 1979 24 0 0 chrUextra 22731552 22731799 -6272857 - FW_DM LINE Jockey 0 4692 4446 1 758 23 68 0 0 chrUextra 22731969 22732013 -6272643 + AT_rich Low_complexity Low_complexity 1 44 0 1 758 3071 160 11 9 chrUextra 22732657 22733315 -6271341 + SAR_DM Satellite Satellite 368 1026 -446 1 758 28 29 0 0 chrUextra 22733577 22733612 -6271044 + AT_rich Low_complexity Low_complexity 1 35 0 1 758 2110 35 0 28 chrUextra 22733631 22733922 -6270734 + BATUMI_I LTR Pao 7002 7284 -679 1 758 996 73 7 7 chrUextra 22733922 22734073 -6270583 + BATUMI_I LTR Pao 1 151 -7812 1 758 5378 11 0 0 chrUextra 22734173 22734831 -6269825 - DM176_I LTR Gypsy -3920 2500 1843 1 758 1218 164 8 25 chrUextra 22735689 22735927 -6268729 - Gypsy12_LTR LTR Gypsy -2102 234 1 1 758 2956 73 10 2 chrUextra 22735926 22736325 -6268331 - Gypsy12_I LTR Gypsy 0 5546 5145 1 758 5335 32 1 0 chrUextra 22736447 22737105 -6267551 - R1_DM LINE R1 -3250 2106 1448 1 758 679 108 0 0 chrUextra 22737205 22737316 -6267340 - ARS406_DM Unknown Unknown -242 111 1 1 758 2496 171 48 19 chrUextra 22737223 22737862 -6266794 + SAR_DM Satellite Satellite 195 852 -620 1 758 5685 1 0 0 chrUextra 22737963 22738621 -6266035 - R1_DM LINE R1 -2448 2908 2251 1 758 1059 94 0 0 chrUextra 22738730 22738910 -6265746 + (ACATG)n Simple_repeat Simple_repeat 1 180 0 1 758 2404 67 0 0 chrUextra 22738920 22739247 -6265409 + ACCORD2_I LTR Gypsy 3753 4079 -3133 1 758 981 45 0 8 chrUextra 22739246 22739379 -6265277 + ACCORD2_I LTR Gypsy 5960 6091 -1121 1 758 3325 0 0 3 chrUextra 22739479 22739862 -6264794 + LSU-rRNA_Dme rRNA rRNA 3519 3900 0 1 758 22 56 0 0 chrUextra 22739934 22739970 -6264686 + AT_rich Low_complexity Low_complexity 1 36 0 1 758 246 150 0 0 chrUextra 22739975 22740015 -6264641 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 758 246 150 0 0 chrUextra 22740067 22740107 -6264549 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 758 1467 186 40 9 chrUextra 22740237 22740892 -6263764 - SAR_DM Satellite Satellite -843 675 1 1 758 5611 1 0 5 chrUextra 22740995 22741653 -6263003 - FW_DM LINE Jockey -595 4097 3443 1 758 1011 9 0 0 chrUextra 22742292 22742408 -6262248 + (TTGTG)n Simple_repeat Simple_repeat 1 116 0 1 758 663 235 14 165 chrUextra 22742511 22742796 -6261860 - HMSBEAGLE_I LTR Gypsy -478 6051 5810 1 758 2970 167 14 9 chrUextra 22743269 22743927 -6260729 + SAR_DM Satellite Satellite 342 1002 -470 1 758 30 0 0 0 chrUextra 22744029 22744059 -6260597 + AT_rich Low_complexity Low_complexity 1 30 0 1 758 28 48 0 0 chrUextra 22744387 22744429 -6260227 + AT_rich Low_complexity Low_complexity 1 42 0 1 758 5639 1 0 0 chrUextra 22744785 22745443 -6259213 + ROO_I LTR Pao 4904 5561 -2695 1 758 5472 2 0 0 chrUextra 22746301 22746929 -6257727 - LSU-rRNA_Dme rRNA rRNA -1485 2415 1788 1 758 2914 175 14 14 chrUextra 22747819 22748475 -6256181 + SAR_DM Satellite Satellite 278 933 -539 1 758 237 132 0 0 chrUextra 22749193 22749231 -6255425 - Gypsy6_I LTR Gypsy -2981 4031 3994 1 758 655 186 7 14 chrUextra 22749502 22749644 -6255012 + HETRP_DM Satellite Satellite 1529 1669 -203 1 758 652 186 7 14 chrUextra 22749786 22749928 -6254728 + HETRP_DM Satellite Satellite 1529 1669 -203 1 758 5427 20 8 0 chrUextra 22750092 22750749 -6253907 - R1_DM LINE R1 -729 4627 3966 1 758 2396 13 0 7 chrUextra 22751609 22751912 -6252744 + Stalker2_I LTR Gypsy 1292 1592 -5810 1 758 1161 13 26 0 chrUextra 22752111 22752265 -6252391 + Stalker2_I LTR Gypsy 1574 1731 -5671 1 758 1034 301 20 24 chrUextra 22752516 22753023 -6251633 - Invader1_I LTR Gypsy -622 2564 2060 1 758 2774 170 21 15 chrUextra 22753124 22753776 -6250880 + SAR_DM Satellite Satellite 267 922 -550 1 758 5218 0 2 2 chrUextra 22753940 22754539 -6250117 - LSU-rRNA_Dme rRNA rRNA 0 3900 3302 1 758 5389 30 1 0 chrUextra 22754639 22755297 -6249359 + R1_DM LINE R1 4326 4984 -372 1 758 5159 44 1 1 chrUextra 22755397 22756055 -6248601 - R1_DM LINE R1 -3600 1756 1099 1 758 3019 72 43 20 chrUextra 22756160 22756813 -6247843 - TART LINE telomeric -3814 10663 10276 1 758 2901 163 13 6 chrUextra 22756918 22757548 -6247108 - SAR_DM Satellite Satellite -610 862 229 1 758 470 90 13 0 chrUextra 22757493 22757571 -6247085 + ARS406_DM Unknown Unknown 1 79 -274 1 758 4403 99 23 5 chrUextra 22757671 22758329 -6246327 + Gypsy12_I LTR Gypsy 1991 2660 -2886 1 758 4840 19 3 6 chrUextra 22758466 22759087 -6245569 - PROTOP_A DNA P -87 1018 400 1 758 5739 1 1 0 chrUextra 22759189 22759845 -6244811 - LSU-rRNA_Dme rRNA rRNA -156 3744 3088 1 758 2936 174 8 9 chrUextra 22759954 22760603 -6244053 - SAR_DM Satellite Satellite -569 903 256 1 758 477 233 8 16 chrUextra 22760751 22760873 -6243783 - GTWIN_LTR LTR Gypsy -243 252 132 1 758 1740 233 0 8 chrUextra 22760968 22761361 -6243295 - GTWIN_I LTR Gypsy 0 6421 6032 1 758 1296 0 0 0 chrUextra 22761461 22761608 -6243048 - LSU-rRNA_Dme rRNA rRNA -1966 1934 1788 1 758 3928 4 4 2 chrUextra 22761652 22762119 -6242537 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1321 1 758 5295 24 33 0 chrUextra 22762219 22762877 -6241779 + R1_DM LINE R1 3046 3725 -1631 1 758 2816 172 14 12 chrUextra 22762981 22763635 -6241021 - SAR_DM Satellite Satellite -514 958 304 1 758 1229 22 22 22 chrUextra 22763735 22763920 -6240736 + NTS_DM Other Other 56 240 0 1 758 562 92 35 0 chrUextra 22763920 22764007 -6240649 + NTS_DM Other Other 1 90 -150 1 758 35 24 0 0 chrUextra 22764280 22764322 -6240334 + AT_rich Low_complexity Low_complexity 1 42 0 1 758 3026 6 0 0 chrUextra 22764493 22764841 -6239815 - ROO_LTR LTR Pao -80 348 1 1 758 2584 189 9 11 chrUextra 22765251 22765884 -6238772 - SAR_DM Satellite Satellite -649 823 192 1 758 721 116 0 0 chrUextra 22765788 22765909 -6238747 + ARS406_DM Unknown Unknown 1 121 -232 1 758 3738 19 10 16 chrUextra 22766011 22766506 -6238150 + BATUMI_I LTR Pao 6510 7001 -962 1 758 1461 274 36 51 chrUextra 22766016 22766662 -6237994 - MAX_I LTR Pao -744 7170 6535 1 758 2892 168 17 15 chrUextra 22766767 22767425 -6237231 + SAR_DM Satellite Satellite 389 1047 -425 1 758 5463 20 0 0 chrUextra 22767525 22768183 -6236473 + STALKER4_I LTR Gypsy 4153 4810 -1720 1 758 1888 0 0 0 chrUextra 22769041 22769259 -6235397 + BEL_LTR LTR Pao 144 361 0 1 758 3028 36 39 0 chrUextra 22769259 22769699 -6234957 - PROTOP DNA P -3497 983 527 1 758 835 10 0 0 chrUextra 22769799 22769897 -6234759 - NTS_DM Other Other -142 98 1 1 758 1861 0 17 13 chrUextra 22769897 22770136 -6234520 - NTS_DM Other Other 0 240 1 1 758 1790 4 17 21 chrUextra 22770136 22770377 -6234279 - NTS_DM Other Other 0 240 1 1 758 502 13 50 38 chrUextra 22770377 22770457 -6234199 - NTS_DM Other Other 0 240 160 1 758 5400 27 0 0 chrUextra 22770557 22771215 -6233441 - R1_DM LINE R1 -2513 2843 2186 1 758 5343 27 1 0 chrUextra 22771315 22771973 -6232683 - R1_DM LINE R1 -2021 3335 2677 1 758 4795 2 2 0 chrUextra 22772073 22772622 -6232034 - SSU-rRNA_Dme rRNA rRNA -1445 550 1 1 758 28 0 0 0 chrUextra 22772695 22772723 -6231933 + AT_rich Low_complexity Low_complexity 1 28 0 1 758 2716 32 3 6 chrUextra 22773112 22773462 -6231194 + CIRCE LINE Composite 4981 5329 -1027 1 758 25 0 0 0 chrUextra 22773464 22773489 -6231167 + AT_rich Low_complexity Low_complexity 1 25 0 1 758 2817 179 6 9 chrUextra 22773590 22774231 -6230425 - SAR_DM Satellite Satellite -642 830 192 1 758 681 98 0 9 chrUextra 22774134 22774247 -6230409 + ARS406_DM Unknown Unknown 1 112 -241 1 758 742 88 0 0 chrUextra 22774348 22774462 -6230194 - ARS406_DM Unknown Unknown -238 115 2 1 758 2728 176 8 9 chrUextra 22774367 22775004 -6229652 + SAR_DM Satellite Satellite 192 827 -645 1 758 5207 24 21 6 chrUextra 22775105 22775763 -6228893 + FW_DM LINE Jockey 3979 4646 -46 1 758 367 0 0 0 chrUextra 22775863 22775905 -6228751 - NTS_DM Other Other -198 42 1 1 758 1861 0 17 13 chrUextra 22775905 22776144 -6228512 - NTS_DM Other Other 0 240 1 1 758 1850 4 17 13 chrUextra 22776144 22776383 -6228273 - NTS_DM Other Other 0 240 1 1 758 809 37 29 29 chrUextra 22776383 22776521 -6228135 - NTS_DM Other Other 0 240 103 1 758 3162 164 6 6 chrUextra 22776621 22777279 -6227377 - SAR_DM Satellite Satellite -435 1037 380 1 758 989 81 3 16 chrUextra 22777385 22778037 -6226619 - RSP Satellite Satellite -45 643 1 1 758 2600 93 14 37 chrUextra 22778138 22778795 -6225861 + DMSAT6 Satellite Satellite 1 642 -74 1 758 1168 0 21 7 chrUextra 22778895 22779040 -6225616 + LSU-rRNA_Dme rRNA rRNA 1642 1788 -2112 1 758 4278 2 0 0 chrUextra 22779084 22779553 -6225103 + LSU-rRNA_Dme rRNA rRNA 1788 2256 -1644 1 758 3144 171 12 12 chrUextra 22779653 22780304 -6224352 + SAR_DM Satellite Satellite 253 903 -569 1 758 2954 182 13 6 chrUextra 22781169 22781798 -6222858 - SAR_DM Satellite Satellite -645 827 195 1 758 817 98 0 0 chrUextra 22781705 22781827 -6222829 + ARS406_DM Unknown Unknown 1 122 -231 1 758 3144 184 5 6 chrUextra 22781927 22782584 -6222072 + SAR_DM Satellite Satellite 256 911 -561 1 758 5600 30 1 0 chrUextra 22782685 22783343 -6221313 + MAX_I LTR Pao 4384 5042 -2872 1 758 5463 0 3 1 chrUextra 22783443 22784101 -6220555 + TRANSPAC_I LTR Gypsy 3291 3949 -641 1 758 198 0 0 0 chrUextra 22784321 22784343 -6220313 + (TA)n Simple_repeat Simple_repeat 1 22 0 1 758 3515 5 7 7 chrUextra 22784343 22784756 -6219900 + DM297_LTR LTR Gypsy 2 414 0 1 758 831 20 0 10 chrUextra 22784756 22784859 -6219797 + DM297_I LTR Gypsy 1 102 -6065 1 758 502 75 0 0 chrUextra 22784959 22785026 -6219630 + R2_DM LINE R2 3541 3607 0 1 758 5422 3 0 0 chrUextra 22785022 22785617 -6219039 + LSU-rRNA_Dme rRNA rRNA 2578 3172 -728 1 758 5842 6 0 0 chrUextra 22785717 22786375 -6218281 + G2_DM LINE Jockey 2395 3052 -50 1 758 4553 93 5 3 chrUextra 22786475 22787131 -6217525 + S_DM DNA Tc1 121 777 -959 1 758 2938 180 21 11 chrUextra 22787233 22787890 -6216766 + SAR_DM Satellite Satellite 208 871 -601 1 758 21 89 0 0 chrUextra 22788028 22788084 -6216572 + AT_rich Low_complexity Low_complexity 1 56 0 1 758 2802 21 6 0 chrUextra 22788749 22789076 -6215580 - G5_DM LINE Jockey -23 4833 4505 1 758 2570 48 39 3 chrUextra 22789076 22789407 -6215249 + DMCR1A LINE CR1 3815 4157 -313 1 758 3054 174 26 8 chrUextra 22790266 22790922 -6213734 + SAR_DM Satellite Satellite 195 862 -610 1 758 276 278 22 11 chrUextra 22791454 22791545 -6213111 + Invader4_I LTR Gypsy 1783 1874 -539 1 758 3332 22 76 0 chrUextra 22791781 22792439 -6212217 - FW_DM LINE Jockey -1774 2918 2211 1 758 2833 172 43 21 chrUextra 22792539 22793197 -6211459 - SAR_DM Satellite Satellite -545 927 256 1 758 1167 8 8 0 chrUextra 22793301 22793435 -6211221 + 5S_DM RNA RNA 1 135 0 1 758 1231 0 0 0 chrUextra 22793669 22793804 -6210852 + 5S_DM RNA RNA 1 135 0 1 758 5762 12 5 0 chrUextra 22794813 22795471 -6209185 + DMRT1B LINE R1 4382 5042 -141 1 758 2121 174 64 15 chrUextra 22795571 22796229 -6208427 + SAR_DM Satellite Satellite 1 689 -203 1 758 3626 57 70 4 chrUextra 22796329 22796987 -6207669 + PROTOP_A DNA P 534 1099 -6 1 758 2086 229 27 18 chrUextra 22797087 22797745 -6206911 + G_DM LINE Jockey 847 1497 -545 1 758 1900 0 17 13 chrUextra 22797845 22798080 -6206576 - NTS_DM Other Other -4 236 1 1 758 1870 17 17 13 chrUextra 22798080 22798319 -6206337 - NTS_DM Other Other 0 240 1 1 758 1269 22 22 22 chrUextra 22798319 22798503 -6206153 - NTS_DM Other Other 0 240 57 1 758 949 60 3 20 chrUextra 22798615 22799203 -6205453 + RSP Satellite Satellite 1 578 0 1 758 34 24 0 0 chrUextra 22799884 22799925 -6204731 + AT_rich Low_complexity Low_complexity 1 41 0 1 758 5686 14 8 0 chrUextra 22800119 22800777 -6203879 + DOC2_DM LINE Jockey 2572 3234 -1559 1 758 1835 17 17 17 chrUextra 22800895 22801135 -6203521 + NTS_DM Other Other 1 240 0 1 758 1835 17 17 17 chrUextra 22801135 22801375 -6203281 + NTS_DM Other Other 1 240 0 1 758 1342 12 6 0 chrUextra 22801375 22801535 -6203121 + NTS_DM Other Other 1 161 -79 1 758 2721 191 6 22 chrUextra 22801636 22802284 -6202372 + SAR_DM Satellite Satellite 481 1118 -354 1 758 293 172 16 0 chrUextra 22802229 22802293 -6202363 - XDMR Unknown Unknown 0 361 297 1 758 1878 9 0 18 chrUextra 22802419 22802638 -6202018 - ACCORD2_LTR LTR Gypsy 0 215 1 1 758 3618 16 14 5 chrUextra 22802638 22803051 -6201605 - R1_DM LINE R1 -2931 2425 2009 1 758 1881 0 17 13 chrUextra 22803154 22803387 -6201269 - NTS_DM Other Other -6 234 1 1 758 1930 4 17 13 chrUextra 22803387 22803626 -6201030 - NTS_DM Other Other 0 240 1 1 758 1349 11 22 16 chrUextra 22803626 22803809 -6200847 - NTS_DM Other Other 0 240 57 1 758 2559 186 47 46 chrUextra 22803909 22804567 -6200089 - DM412 LTR Gypsy -977 5920 5262 1 758 5606 14 5 1 chrUextra 22804667 22805325 -6199331 + ROO_I LTR Pao 3511 4170 -4086 1 758 5897 5 1 0 chrUextra 22805426 22806083 -6198573 + FW_DM LINE Jockey 1872 2529 -2163 1 94 3053 175 11 9 chrUextra 22806184 22806835 -6197821 + SAR_DM Satellite Satellite 425 1076 -396 1 759 5994 0 0 1 chrUextra 22806941 22807599 -6197057 + SSU-rRNA_Dme rRNA rRNA 402 1058 -937 1 759 5899 0 3 3 chrUextra 22807699 22808357 -6196299 + SSU-rRNA_Dme rRNA rRNA 815 1472 -523 1 759 5874 3 0 1 chrUextra 22809215 22809873 -6194783 + R1_DM LINE R1 2366 3022 -2334 1 759 231 299 25 46 chrUextra 22810290 22810486 -6194170 - Gypsy5_I LTR Gypsy -1620 4889 4698 1 759 3207 165 11 9 chrUextra 22810736 22811389 -6193267 - SAR_DM Satellite Satellite -478 994 341 1 759 3610 36 123 0 chrUextra 22812249 22812720 -6191936 + DMRT1A LINE R1 2807 3335 -1848 1 759 1585 36 10 0 chrUextra 22812712 22812905 -6191751 + DMRT1A LINE R1 4451 4645 -538 1 759 202 265 0 0 chrUextra 22813787 22813836 -6190820 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 759 2218 12 1 0 chrUextra 22814521 22814916 -6189740 + MDG3_I LTR Gypsy 4558 4986 0 1 759 1916 36 4 53 chrUextra 22814916 22815179 -6189477 + MDG3_LTR LTR Gypsy 1 250 -17 1 759 1355 6 0 18 chrUextra 22815288 22815453 -6189203 - NTS_DM Other Other -78 162 1 1 759 1203 0 24 18 chrUextra 22815453 22815617 -6189039 - NTS_DM Other Other 0 240 76 1 759 2604 13 0 0 chrUextra 22815627 22815931 -6188725 - G6_DM LINE Jockey 0 2042 1739 1 759 5434 0 2 2 chrUextra 22816037 22816634 -6188022 + LSU-rRNA_Dme rRNA rRNA 3304 3900 0 1 759 26 0 0 0 chrUextra 22816843 22816869 -6187787 + AT_rich Low_complexity Low_complexity 1 26 0 1 759 4453 10 0 0 chrUextra 22816869 22817376 -6187280 - DM176_LTR LTR Gypsy 0 507 1 1 759 708 0 0 0 chrUextra 22817376 22817453 -6187203 - DM176_I LTR Gypsy 0 6420 6344 1 759 2686 174 19 27 chrUextra 22817554 22818186 -6186470 - SAR_DM Satellite Satellite -666 806 180 1 759 677 167 0 15 chrUextra 22818077 22818211 -6186445 + ARS406_DM Unknown Unknown 1 132 -221 1 759 5679 9 0 5 chrUextra 22818311 22818969 -6185687 + IDEFIX_I LTR Gypsy 2379 3033 -2595 1 759 2499 178 110 38 chrUextra 22819072 22819727 -6184929 + TAHRE LINE telomeric 7071 7772 -2691 1 759 2928 186 17 8 chrUextra 22819827 22820484 -6184172 - SAR_DM Satellite Satellite -643 829 167 1 759 2941 177 17 12 chrUextra 22820587 22821239 -6183417 - SAR_DM Satellite Satellite -572 900 246 1 759 3953 92 0 29 chrUextra 22822101 22822660 -6181996 + Gypsy12_I LTR Gypsy 3332 3874 -1672 1 759 578 168 10 0 chrUextra 22822658 22822759 -6181897 + Gypsy12_I LTR Gypsy 4206 4307 -1239 1 759 699 0 0 0 chrUextra 22822860 22822938 -6181718 - NTS_DM Other Other -125 115 38 1 759 877 9 0 35 chrUextra 22822938 22823051 -6181605 - NTS_DM Other Other -107 133 25 1 759 1304 18 0 6 chrUextra 22823103 22823268 -6181388 - NTS_DM Other Other -39 201 38 1 759 907 9 0 27 chrUextra 22823268 22823380 -6181276 - NTS_DM Other Other -107 133 25 1 759 545 36 0 12 chrUextra 22823433 22823517 -6181139 - NTS_DM Other Other -39 201 119 1 759 525 46 0 0 chrUextra 22823620 22823685 -6180971 - S2_DM DNA Tc1 -1670 65 1 1 759 349 161 10 147 chrUextra 22823689 22823791 -6180865 + DNAREP1_DM LINE Penelope 501 588 -6 1 759 266 253 90 50 chrUextra 22824030 22824130 -6180526 - DNAREP1_DM LINE Penelope -2 592 489 1 759 21 0 0 0 chrUextra 22824203 22824224 -6180432 + AT_rich Low_complexity Low_complexity 1 21 0 1 759 5471 9 6 1 chrUextra 22824375 22825033 -6179623 + TART LINE telomeric 9292 9952 -4525 1 759 5992 1 0 1 chrUextra 22825133 22825791 -6178865 - LSU-rRNA_Dme rRNA rRNA -470 3430 2774 1 759 921 203 39 34 chrUextra 22825896 22826157 -6178499 - TAHRE LINE telomeric -4317 10160 9659 1 759 2047 73 0 4 chrUextra 22826649 22826909 -6177747 + Gypsy12_I LTR Gypsy 5288 5546 0 1 759 1896 178 23 28 chrUextra 22826908 22827307 -6177349 + Gypsy12_LTR LTR Gypsy 1 397 -1939 1 759 959 62 0 7 chrUextra 22827409 22827554 -6177102 + (CAAGA)n Simple_repeat Simple_repeat 4 147 0 1 759 1611 12 0 25 chrUextra 22827555 22828010 -6176646 + (CACGA)n Simple_repeat Simple_repeat 1 443 0 1 759 203 0 0 36 chrUextra 22828023 22828051 -6176605 + (CACAA)n Simple_repeat Simple_repeat 5 31 0 1 759 5867 12 0 0 chrUextra 22828165 22828823 -6175833 + Gypsy4_I LTR Gypsy 899 1556 -4732 1 759 2285 172 11 8 chrUextra 22828923 22829581 -6175075 - SAR_DM Satellite Satellite -706 660 1 1 759 4989 48 8 2 chrUextra 22829692 22830324 -6174332 + TART LINE telomeric 2045 2680 -11797 1 759 3111 171 12 8 chrUextra 22830439 22831095 -6173561 + SAR_DM Satellite Satellite 326 984 -488 1 759 3181 173 8 8 chrUextra 22831198 22831850 -6172806 + SAR_DM Satellite Satellite 252 903 -569 1 759 3281 8 0 0 chrUextra 22831952 22832331 -6172325 - QUASIMODO_LTR LTR Gypsy -279 379 1 1 759 2209 11 11 0 chrUextra 22832331 22832609 -6172047 - QUASIMODO_I LTR Gypsy 0 6060 5780 1 759 1293 86 5 31 chrUextra 22832713 22833366 -6171290 + (CTATT)n Simple_repeat Simple_repeat 1 635 0 1 759 5592 23 1 1 chrUextra 22833466 22834123 -6170533 - R1_DM LINE R1 -1030 4326 3670 1 759 2924 15 0 0 chrUextra 22834223 22834554 -6170102 - PROTOP_A DNA P -774 331 1 1 759 1853 52 18 34 chrUextra 22834554 22834880 -6169776 + PROTOP DNA P 3894 4107 -373 1 759 5443 35 0 12 chrUextra 22834980 22835637 -6169019 + BATUMI_I LTR Pao 5534 6182 -1781 1 759 1598 33 0 99 chrUextra 22836036 22836269 -6168387 + DIVER2_I LTR Pao 1366 1575 -2572 1 759 1059 75 20 7 chrUextra 22836246 22836394 -6168262 + DIVER2_I LTR Pao 3719 3868 -279 1 759 3493 269 55 24 chrUextra 22836498 22837884 -6166772 - SAR_DM Satellite Satellite -208 1429 1 1 759 659 137 0 8 chrUextra 22837790 22837908 -6166748 + ARS406_DM Unknown Unknown 1 117 -236 1 759 582 52 26 0 chrUextra 22838008 22838085 -6166571 - DM176_I LTR Gypsy -6341 79 1 1 759 4470 8 0 0 chrUextra 22838085 22838592 -6166064 - DM176_LTR LTR Gypsy 0 507 1 1 759 396 143 0 0 chrUextra 22838593 22838663 -6165993 + (TA)n Simple_repeat Simple_repeat 1 70 0 1 759 47 0 0 0 chrUextra 22838827 22838874 -6165782 + AT_rich Low_complexity Low_complexity 1 47 0 1 759 3131 169 9 12 chrUextra 22839525 22840179 -6164477 - SAR_DM Satellite Satellite -411 1061 410 1 759 285 198 0 0 chrUextra 22840283 22840369 -6164287 + (AATAG)n Simple_repeat Simple_repeat 4 89 0 1 759 480 101 10 10 chrUextra 22840400 22840500 -6164156 - G2_DM LINE Jockey -3 3099 3000 1 759 3347 42 12 5 chrUextra 22840496 22840928 -6163728 - G2_DM LINE Jockey -211 2891 2457 1 759 28 48 0 0 chrUextra 22841156 22841198 -6163458 + AT_rich Low_complexity Low_complexity 1 42 0 1 759 32 0 0 0 chrUextra 22841526 22841558 -6163098 + AT_rich Low_complexity Low_complexity 1 32 0 1 759 5185 3 0 17 chrUextra 22841793 22842450 -6162206 + DM412 LTR Gypsy 1023 1668 -5229 1 759 3755 58 43 0 chrUextra 22842622 22843207 -6161449 - PROTOP_A DNA P 0 1105 570 1 759 1335 7 0 0 chrUextra 22843815 22843964 -6160692 - SSU-rRNA_Dme rRNA rRNA 0 1995 1847 1 759 2861 197 11 19 chrUextra 22844064 22844712 -6159944 - SAR_DM Satellite Satellite -673 642 1 1 759 2332 8 0 0 chrUextra 22844825 22845081 -6159575 - LSU-rRNA_Dme rRNA rRNA -1067 2833 2578 1 759 3634 2 0 0 chrUextra 22845078 22845478 -6159178 - R2_DM LINE R2 0 3607 3208 1 759 242 103 25 25 chrUextra 22845596 22845636 -6159020 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 759 237 175 0 0 chrUextra 22845688 22845728 -6158928 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 759 251 186 0 0 chrUextra 22845777 22845820 -6158836 + LSU-rRNA_Dme rRNA rRNA 2578 2620 -1280 1 759 2966 0 0 0 chrUextra 22845900 22846235 -6158421 - G_DM LINE Jockey -3 4343 4009 1 759 454 0 0 0 chrUextra 22846335 22846385 -6158271 + Invader6_I LTR Gypsy 3953 4002 -97 1 759 782 0 0 11 chrUextra 22846425 22846516 -6158140 + Invader6_I LTR Gypsy 4010 4099 0 1 759 3505 18 0 0 chrUextra 22846516 22846909 -6157747 + Invader6_LTR LTR Gypsy 1 393 0 1 759 762 0 0 0 chrUextra 22846909 22846992 -6157664 + Invader6_I LTR Gypsy 1 83 -4016 1 759 5508 36 0 0 chrUextra 22847092 22847749 -6156907 - MDG1_I LTR Gypsy -1823 4773 4117 1 759 4383 10 0 2 chrUextra 22847849 22848341 -6156315 - Copia2_I LTR Copia -146 4016 3526 1 759 1649 261 64 18 chrUextra 22848642 22849263 -6155393 - TV1I LTR Gypsy -2351 3612 2963 1 759 2748 13 0 0 chrUextra 22849363 22849672 -6154984 + BATUMI_I LTR Pao 6112 6420 -1543 1 759 2540 16 3 19 chrUextra 22849698 22850012 -6154644 - BATUMI_I LTR Pao -962 7001 6693 1 759 5483 21 8 8 chrUextra 22850120 22850777 -6153879 + FW_DM LINE Jockey 3946 4602 -90 1 759 5666 1 1 1 chrUextra 22850884 22851534 -6153122 + QUASIMODO_I LTR Gypsy 1589 2238 -3822 1 759 5739 8 1 5 chrUextra 22851634 22852291 -6152365 + G_DM LINE Jockey 1455 2109 -2237 1 759 2592 191 5 9 chrUextra 22852391 22852972 -6151684 - SAR_DM Satellite Satellite -398 1074 496 1 759 581 28 0 0 chrUextra 22852977 22853048 -6151608 + ARS406_DM Unknown Unknown 90 160 -193 1 759 1744 22 17 17 chrUextra 22853148 22853380 -6151276 - NTS_DM Other Other -8 232 1 1 759 1794 25 17 17 chrUextra 22853380 22853620 -6151036 - NTS_DM Other Other 0 240 1 1 759 1264 22 22 22 chrUextra 22853620 22853805 -6150851 - NTS_DM Other Other 0 240 56 1 759 27 29 0 0 chrUextra 22854214 22854248 -6150408 + AT_rich Low_complexity Low_complexity 1 34 0 1 759 261 33 0 0 chrUextra 22854487 22854517 -6150139 + Baggins1 LINE LOA 4727 4756 -697 1 759 230 83 0 0 chrUextra 22854525 22854561 -6150095 + FB4_DM DNA Tc1 3908 3943 -146 1 759 4897 49 11 5 chrUextra 22854662 22855317 -6149339 - R1_DM LINE R1 -981 4375 3789 1 759 2566 78 11 55 chrUextra 22855419 22856054 -6148602 - DMSAT6 Satellite Satellite -32 606 1 1 759 2878 168 16 11 chrUextra 22856176 22856789 -6147867 - SAR_DM Satellite Satellite -458 1014 399 1 759 745 252 89 28 chrUextra 22856507 22856833 -6147823 + XDMR_DM Unknown Unknown 6 351 -9 1 759 305 176 0 26 chrUextra 22856933 22857009 -6147647 + XDMR_DM Unknown Unknown 278 351 -9 1 759 2771 182 11 20 chrUextra 22856951 22857590 -6147066 - SAR_DM Satellite Satellite -371 1101 469 1 759 5882 1 0 0 chrUextra 22857690 22858347 -6146309 - ROO_I LTR Pao -3596 4660 4004 1 759 1723 165 17 8 chrUextra 22858447 22859094 -6145562 + SAR_DM Satellite Satellite 1 652 -500 1 759 2973 171 9 9 chrUextra 22859205 22859841 -6144815 - SAR_DM Satellite Satellite -645 827 192 1 759 700 104 9 9 chrUextra 22859745 22859861 -6144795 + ARS406_DM Unknown Unknown 1 116 -237 1 759 3011 166 11 12 chrUextra 22859961 22860601 -6144055 + SAR_DM Satellite Satellite 438 1076 -396 1 759 2565 152 10 4 chrUextra 22860722 22861203 -6143453 - SAR_DM Satellite Satellite -620 852 369 1 759 1016 87 0 0 chrUextra 22861225 22861375 -6143281 + ARS406_DM Unknown Unknown 1 150 -203 1 759 5316 40 9 6 chrUextra 22861475 22862132 -6142524 - R1_DM LINE R1 -2448 2908 2250 1 759 5824 8 1 0 chrUextra 22862232 22862889 -6141767 - R1_DM LINE R1 -144 5212 4555 1 759 2980 234 29 16 chrUextra 22862989 22864366 -6140290 + SAR_DM Satellite Satellite 1 1394 -549 1 759 2727 9 3 0 chrUextra 22864503 22864838 -6139818 - Gypsy4_I LTR Gypsy -5952 336 1 1 759 2550 17 0 0 chrUextra 22864838 22865125 -6139531 - Gypsy4_LTR LTR Gypsy 0 287 1 1 759 2897 183 6 23 chrUextra 22865260 22865914 -6138742 + SAR_DM Satellite Satellite 448 1090 -382 1 759 2900 176 14 14 chrUextra 22866018 22866663 -6137993 + SAR_DM Satellite Satellite 432 1076 -396 1 759 399 286 35 35 chrUextra 22866813 22866999 -6137657 + Gypsy3_I LTR Gypsy 1324 1546 -4631 1 759 2408 133 8 12 chrUextra 22867531 22868188 -6136468 - BATUMI_I LTR Pao -3112 4802 4101 1 759 4945 25 6 40 chrUextra 22868289 22868945 -6135711 + DOC2_DM LINE Jockey 783 1416 -3377 1 759 1965 17 30 0 chrUextra 22869045 22869282 -6135374 + R1_DM LINE R1 4823 5066 -290 1 759 961 44 0 0 chrUextra 22869279 22869393 -6135263 + R1_DM LINE R1 5243 5356 0 1 759 2040 72 7 0 chrUextra 22869426 22869702 -6134954 + R1_DM LINE R1 1 278 -5078 1 759 3116 171 14 9 chrUextra 22869802 22870459 -6134197 - SAR_DM Satellite Satellite -459 1013 354 1 759 1260 0 0 7 chrUextra 22870559 22870709 -6133947 - ROVER-LTR_DM LTR Gypsy -218 149 1 1 759 4192 10 2 0 chrUextra 22870709 22871216 -6133440 - ROVER-I_DM LTR Gypsy 0 6584 6077 1 759 518 118 0 0 chrUextra 22871319 22871404 -6133252 - ARS406_DM Unknown Unknown -255 98 14 1 759 2843 161 11 9 chrUextra 22871403 22871972 -6132684 + SAR_DM Satellite Satellite 371 940 -532 1 759 5659 24 1 0 chrUextra 22872073 22872730 -6131926 - NINJA_I LTR Pao -4203 1808 1151 1 759 2540 243 3 3 chrUextra 22872844 22873480 -6131176 - DM412 LTR Gypsy -497 6400 5765 1 759 5507 34 9 0 chrUextra 22873587 22874244 -6130412 - R1_DM LINE R1 -1963 3393 2731 1 759 508 122 100 0 chrUextra 22874650 22874740 -6129916 + DNAREP1_DM LINE Penelope 496 594 0 1 759 33 25 0 0 chrUextra 22874802 22874842 -6129814 + AT_rich Low_complexity Low_complexity 1 40 0 1 759 3231 163 14 8 chrUextra 22875107 22875758 -6128898 + SAR_DM Satellite Satellite 371 1025 -447 1 759 575 327 51 73 chrUextra 22875862 22876506 -6128150 + TIRANT_I LTR Gypsy 4508 5137 -2555 1 759 3051 179 21 9 chrUextra 22876615 22877270 -6127386 - SAR_DM Satellite Satellite -470 1002 340 1 759 3177 167 11 9 chrUextra 22877376 22878024 -6126632 + SAR_DM Satellite Satellite 399 1047 -425 1 759 918 194 25 3 chrUextra 22878137 22878498 -6126158 + SAR_DM Satellite Satellite 1 368 -558 1 759 1318 152 38 4 chrUextra 22878521 22878786 -6125870 + SAR_DM Satellite Satellite 373 646 -826 1 759 239 156 0 0 chrUextra 22878886 22878931 -6125725 - ARS406_DM Unknown Unknown -308 45 1 1 759 2983 181 6 6 chrUextra 22878891 22879525 -6125131 + SAR_DM Satellite Satellite 246 879 -593 1 759 635 49 0 0 chrUextra 22879461 22879543 -6125113 - ARS406_DM Unknown Unknown -164 189 108 1 759 5443 3 0 3 chrUextra 22879643 22880300 -6124356 + ROO_I LTR Pao 453 1107 -7149 1 759 3118 178 9 8 chrUextra 22880400 22881057 -6123599 - SAR_DM Satellite Satellite -444 1028 371 1 759 1455 31 0 0 chrUextra 22881157 22881479 -6123177 + (CATCT)n Simple_repeat Simple_repeat 1 322 0 1 759 1323 50 0 0 chrUextra 22881494 22881674 -6122982 + (CATCT)n Simple_repeat Simple_repeat 1 180 0 1 759 777 97 0 0 chrUextra 22881674 22881808 -6122848 + (CATCG)n Simple_repeat Simple_repeat 1 134 0 1 759 3106 48 73 0 chrUextra 22881914 22882571 -6122085 - PROTOP DNA P -264 841 270 1 759 5636 3 0 0 chrUextra 22882671 22883328 -6121328 + IDEFIX_I LTR Gypsy 4078 4734 -894 1 759 3732 77 9 26 chrUextra 22883448 22884085 -6120571 + DOC2_DM LINE Jockey 6 711 -4082 1 759 5131 5 16 2 chrUextra 22884185 22884544 -6120112 + QUASIMODO_I LTR Gypsy 3365 3723 -2337 1 759 243 0 0 0 chrUextra 22884544 22884571 -6120085 + (CCTAA)n Simple_repeat Simple_repeat 2 28 0 1 759 5131 5 16 2 chrUextra 22884571 22884842 -6119814 + QUASIMODO_I LTR Gypsy 3724 4002 -2058 1 759 2671 194 8 21 chrUextra 22884942 22885595 -6119061 - SAR_DM Satellite Satellite -1073 645 1 1 759 3818 50 44 0 chrUextra 22885699 22886219 -6118437 + PROTOP_A DNA P 573 1105 0 1 759 3223 163 14 11 chrUextra 22886456 22887113 -6117543 + SAR_DM Satellite Satellite 384 1042 -430 1 759 1922 4 17 13 chrUextra 22887220 22887459 -6117197 - NTS_DM Other Other 0 240 1 1 759 1870 17 17 13 chrUextra 22887459 22887698 -6116958 - NTS_DM Other Other 0 240 1 1 759 1153 24 23 23 chrUextra 22887698 22887870 -6116786 - NTS_DM Other Other 0 240 69 1 759 5838 1 1 0 chrUextra 22887970 22888627 -6116029 + ROO_I LTR Pao 1043 1700 -6556 1 759 2028 170 9 13 chrUextra 22889485 22889939 -6114717 + SAR_DM Satellite Satellite 507 958 -514 1 759 1279 41 5 45 chrUextra 22889939 22890141 -6114515 + BATUMI_I LTR Pao 7000 7193 -770 1 759 5331 20 11 8 chrUextra 22890241 22890898 -6113758 + FW_DM LINE Jockey 2147 2805 -1887 1 759 5449 1 1 1 chrUextra 22890999 22891655 -6113001 + ROO_I LTR Pao 3240 3895 -4361 1 759 5430 6 1 0 chrUextra 22891755 22892412 -6112244 - DMRT1A LINE R1 -4025 1158 501 1 759 5475 20 0 0 chrUextra 22892512 22893169 -6111487 - R1_DM LINE R1 -1667 3689 3033 1 759 2532 100 22 11 chrUextra 22893279 22893926 -6110730 + DMSAT6 Satellite Satellite 1 653 -3 1 759 5372 3 18 1 chrUextra 22894026 22894683 -6109973 + HMSBEAGLE_I LTR Gypsy 22 689 -5840 1 759 2371 175 28 27 chrUextra 22894791 22895440 -6109216 - SAR_DM Satellite Satellite -1056 649 1 1 759 3152 146 24 17 chrUextra 22895540 22896197 -6108459 - SAR_DM Satellite Satellite -418 1054 393 1 759 5326 32 1 0 chrUextra 22896297 22896954 -6107702 - MAX_I LTR Pao -2901 5013 4356 1 759 246 150 0 0 chrUextra 22897144 22897184 -6107472 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 759 246 150 0 0 chrUextra 22897236 22897276 -6107380 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 759 21 36 0 0 chrUextra 22897289 22897317 -6107339 + AT_rich Low_complexity Low_complexity 1 28 0 1 759 255 125 0 0 chrUextra 22897319 22897359 -6107297 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 759 22 56 0 0 chrUextra 22897372 22897408 -6107248 + AT_rich Low_complexity Low_complexity 1 36 0 1 759 870 9 0 27 chrUextra 22897434 22897546 -6107110 + NTS_DM Other Other 25 133 -107 1 759 1252 18 0 6 chrUextra 22897546 22897711 -6106945 + NTS_DM Other Other 38 201 -39 1 759 4052 0 6 4 chrUextra 22897811 22898294 -6106362 + LSU-rRNA_Dme rRNA rRNA 1305 1788 -2112 1 759 1121 8 0 0 chrUextra 22898338 22898468 -6106188 + LSU-rRNA_Dme rRNA rRNA 1788 1917 -1983 1 759 246 150 0 0 chrUextra 22898650 22898690 -6105966 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 759 22 56 0 0 chrUextra 22898695 22898731 -6105925 + AT_rich Low_complexity Low_complexity 1 36 0 1 759 3648 0 2 2 chrUextra 22898803 22899225 -6105431 - LSU-rRNA_Dme rRNA rRNA 0 3900 3479 1 759 907 233 77 29 chrUextra 22899326 22899741 -6104915 - Gypsy12_LTR LTR Gypsy -446 1890 1456 1 759 662 228 31 31 chrUextra 22899751 22899973 -6104683 - Gypsy12_LTR LTR Gypsy -1081 1255 1034 1 759 2420 93 15 17 chrUextra 22900082 22900739 -6103917 + DMSAT6 Satellite Satellite 1 656 -105 1 759 5268 11 0 5 chrUextra 22900839 22901483 -6103173 - BATUMI_I LTR Pao -20 7943 7303 1 759 378 121 0 0 chrUextra 22901596 22901654 -6103002 - HETRP_DM Satellite Satellite -286 1586 1529 1 759 452 248 0 16 chrUextra 22901802 22901925 -6102731 - HETRP_DM Satellite Satellite -203 1669 1549 1 759 447 35 0 0 chrUextra 22901925 22901982 -6102674 + (TC)n Simple_repeat Simple_repeat 2 58 0 1 759 665 182 7 7 chrUextra 22902113 22902251 -6102405 - HETRP_DM Satellite Satellite -203 1669 1532 1 759 825 30 0 0 chrUextra 22902355 22902454 -6102202 + PROTOP_A DNA P 1007 1105 0 1 759 26 30 0 0 chrUextra 22902829 22902862 -6101794 + AT_rich Low_complexity Low_complexity 1 33 0 1 759 1020 46 13 19 chrUextra 22903867 22904021 -6100635 - BATUMI_I LTR Pao -1230 6733 6581 1 759 2732 69 161 2 chrUextra 22904071 22904524 -6100132 + BATUMI_I LTR Pao 7303 7827 -136 1 759 1800 174 5 5 chrUextra 22904624 22905281 -6099375 + SAR_DM Satellite Satellite 1 657 -558 1 759 617 0 0 13 chrUextra 22905381 22905457 -6099199 - NTS_DM Other Other -128 112 38 1 759 840 9 0 35 chrUextra 22905457 22905570 -6099086 - NTS_DM Other Other -107 133 25 1 759 1252 18 0 6 chrUextra 22905622 22905787 -6098869 - NTS_DM Other Other -39 201 38 1 759 870 9 0 27 chrUextra 22905787 22905899 -6098757 - NTS_DM Other Other -107 133 25 1 759 553 35 0 11 chrUextra 22905951 22906038 -6098618 - NTS_DM Other Other -39 201 116 1 759 5623 5 0 0 chrUextra 22906138 22906795 -6097861 - DMRT1A LINE R1 -3395 1788 1132 1 759 3365 78 61 13 chrUextra 22906897 22907453 -6097203 + PROTOP_B DNA P 571 1153 0 1 759 2758 169 37 8 chrUextra 22908416 22909061 -6095595 + SAR_DM Satellite Satellite 349 1012 -460 1 759 5384 26 0 0 chrUextra 22909166 22909823 -6094833 - R1_DM LINE R1 -3120 2236 1580 1 759 2628 175 23 21 chrUextra 22909923 22910578 -6094078 + SAR_DM Satellite Satellite 224 879 -593 1 759 2742 176 23 12 chrUextra 22910683 22911337 -6093319 + SAR_DM Satellite Satellite 346 1006 -466 1 759 853 58 0 0 chrUextra 22911437 22911557 -6093099 + ARS406_DM Unknown Unknown 39 158 -195 1 759 2444 163 11 15 chrUextra 22911564 22912094 -6092562 - SAR_DM Satellite Satellite -569 903 376 1 759 5418 15 1 1 chrUextra 22912197 22912851 -6091805 - R1_DM LINE R1 -1461 3895 3242 1 759 3332 20 4 51 chrUextra 22912982 22913451 -6091205 - CIRCE LINE Composite -929 5427 4981 1 759 5521 15 0 0 chrUextra 22913708 22914365 -6090291 - DMRT1B LINE R1 -1535 3648 2992 1 759 5483 15 5 0 chrUextra 22914465 22915122 -6089534 - FW_DM LINE Jockey -401 4291 3632 1 759 5437 6 0 0 chrUextra 22915222 22915879 -6088777 + PROTOP_A DNA P 286 942 -163 1 759 3566 0 2 0 chrUextra 22916229 22916636 -6088020 - SSU-rRNA_Dme rRNA rRNA 0 1995 1588 1 759 5333 12 0 0 chrUextra 22916736 22917393 -6087263 + Invader2_I LTR Gypsy 2912 3568 -1024 1 759 2808 176 14 9 chrUextra 22917493 22918145 -6086511 + SAR_DM Satellite Satellite 422 1076 -396 1 759 2621 84 1 27 chrUextra 22918273 22918683 -6085973 + QUASIMODO_LTR LTR Gypsy 133 658 0 1 759 5532 3 1 0 chrUextra 22919014 22919664 -6084992 + DM176_I LTR Gypsy 4991 5641 -779 1 759 3046 156 12 15 chrUextra 22919765 22920421 -6084235 - SAR_DM Satellite Satellite -439 1033 380 1 759 28 0 0 0 chrUextra 22920590 22920618 -6084038 + AT_rich Low_complexity Low_complexity 1 28 0 1 759 975 112 0 0 chrUextra 22920620 22921052 -6083604 + (TTA)n Simple_repeat Simple_repeat 1 432 0 1 759 5396 23 0 0 chrUextra 22921278 22921935 -6082721 + R1_DM LINE R1 2400 3056 -2300 1 759 5611 3 0 0 chrUextra 22922046 22922692 -6081964 + LSU-rRNA_Dme rRNA rRNA 1788 2433 -1467 1 759 647 0 0 0 chrUextra 22922792 22922866 -6081790 + LSU-rRNA_Dme rRNA rRNA 3827 3900 0 1 759 22 56 0 0 chrUextra 22922938 22922974 -6081682 + AT_rich Low_complexity Low_complexity 1 36 0 1 759 246 150 0 0 chrUextra 22922979 22923019 -6081637 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 759 246 150 0 0 chrUextra 22923071 22923111 -6081545 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 759 246 150 0 0 chrUextra 22923164 22923204 -6081452 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 759 255 125 0 0 chrUextra 22923247 22923287 -6081369 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 759 22 56 0 0 chrUextra 22923300 22923336 -6081320 + AT_rich Low_complexity Low_complexity 1 36 0 1 759 625 36 0 35 chrUextra 22923362 22923449 -6081207 + NTS_DM Other Other 25 108 -132 1 759 2661 189 9 12 chrUextra 22923552 22924206 -6080450 + SAR_DM Satellite Satellite 195 846 -626 1 759 3768 26 0 16 chrUextra 22925220 22925720 -6078936 + STALKER4_I LTR Gypsy 1064 1555 -4975 1 759 2741 185 6 8 chrUextra 22925820 22926458 -6078198 - SAR_DM Satellite Satellite -641 831 195 1 759 666 107 0 9 chrUextra 22926364 22926477 -6078179 + ARS406_DM Unknown Unknown 1 112 -241 1 759 2753 174 36 9 chrUextra 22926579 22927223 -6077433 + SAR_DM Satellite Satellite 416 1076 -396 1 759 5639 0 0 1 chrUextra 22927334 22927991 -6076665 + R1_DM LINE R1 2712 3367 -1989 1 759 3450 15 0 0 chrUextra 22928091 22928503 -6076153 - PROTOP_A DNA P -693 412 1 1 759 1923 45 0 0 chrUextra 22928503 22928748 -6075908 - DMCR1A LINE CR1 -2825 1645 1401 1 759 2778 181 13 8 chrUextra 22928848 22929484 -6075172 - SAR_DM Satellite Satellite -639 833 195 1 759 673 106 0 9 chrUextra 22929390 22929504 -6075152 + ARS406_DM Unknown Unknown 1 113 -240 1 759 273 305 30 8 chrUextra 22929609 22929741 -6074915 - Invader4_I LTR Gypsy -2278 135 1 1 759 4825 16 20 21 chrUextra 22930360 22931016 -6073640 + ROO_I LTR Pao 303 957 -7299 1 759 5362 14 6 0 chrUextra 22931116 22931772 -6072884 - IVK_DM LINE I -3277 2125 1466 1 759 1761 203 118 41 chrUextra 22931876 22932504 -6072152 + HETA LINE telomeric 5048 5723 -358 1 759 5359 21 1 3 chrUextra 22932628 22933284 -6071372 + R1_DM LINE R1 3229 3883 -1473 1 759 5619 1 0 1 chrUextra 22933384 22934040 -6070616 - R1_DM LINE R1 -1990 3366 2712 1 759 2783 180 9 5 chrUextra 22934142 22934773 -6069883 - SAR_DM Satellite Satellite -593 879 246 1 759 376 111 0 0 chrUextra 22934733 22934796 -6069860 + ARS406_DM Unknown Unknown 1 63 -290 1 759 1757 5 5 0 chrUextra 22934896 22935100 -6069556 - SSU-rRNA_Dme rRNA rRNA -1338 657 453 1 759 1922 122 64 31 chrUextra 22935107 22935529 -6069127 + STALKER4_I LTR Gypsy 564 999 -5531 1 759 2945 170 11 8 chrUextra 22935652 22936304 -6068352 - SAR_DM Satellite Satellite -487 985 332 1 94 2477 181 8 30 chrUextra 22937165 22937802 -6066854 + SAR_DM Satellite Satellite 496 1118 -354 1 760 362 186 10 19 chrUextra 22937716 22937820 -6066836 - XDMR_DM Unknown Unknown 0 360 258 1 760 2815 19 101 0 chrUextra 22937920 22938328 -6066328 - R1_DM LINE R1 -1561 3795 3347 1 760 2022 36 0 0 chrUextra 22938324 22938576 -6066080 - R1_DM LINE R1 -2696 2660 2409 1 760 1152 7 7 0 chrUextra 22938676 22938822 -6065834 - ROO_I LTR Pao -3514 4742 4596 1 760 522 119 0 0 chrUextra 22938822 22938906 -6065750 + (CTG)n Simple_repeat Simple_repeat 1 84 0 1 760 3507 7 18 5 chrUextra 22938906 22939332 -6065324 - ROO_I LTR Pao -7616 640 207 1 760 223 134 67 0 chrUextra 22939432 22939551 -6065105 + (TTATA)n Simple_repeat Simple_repeat 4 130 0 1 760 292 136 68 0 chrUextra 22939554 22939716 -6064940 + T-rich Low_complexity Low_complexity 5 177 0 1 760 1927 5 0 0 chrUextra 22939739 22939963 -6064693 - DIVER_LTR LTR Pao 0 224 1 1 760 1074 8 0 0 chrUextra 22939963 22940088 -6064568 - DIVER_I LTR Pao 0 5643 5519 1 760 4394 78 20 0 chrUextra 22940188 22940844 -6063812 - STALKER4_I LTR Gypsy -275 6255 5587 1 760 2628 173 10 13 chrUextra 22940944 22941560 -6063096 - SAR_DM Satellite Satellite -667 805 192 1 760 881 88 0 7 chrUextra 22941463 22941600 -6063056 + ARS406_DM Unknown Unknown 1 136 -217 1 760 324 105 18 0 chrUextra 22941700 22941757 -6062899 - ARS406_DM Unknown Unknown -295 58 1 1 760 2510 174 8 5 chrUextra 22941717 22942349 -6062307 + SAR_DM Satellite Satellite 1 633 -677 1 760 5587 9 1 0 chrUextra 22942456 22943112 -6061544 + DOC2_DM LINE Jockey 1733 2389 -2404 1 760 1589 53 164 99 chrUextra 22943212 22943565 -6061091 + ROO_I LTR Pao 519 894 -7362 1 760 2479 32 3 0 chrUextra 22943554 22943868 -6060788 + ROO_I LTR Pao 1303 1617 -6639 1 760 669 27 35 35 chrUextra 22943968 22944083 -6060573 + NTS_DM Other Other 126 240 0 1 760 1744 21 17 17 chrUextra 22944083 22944323 -6060333 + NTS_DM Other Other 1 240 0 1 760 1756 17 17 17 chrUextra 22944323 22944563 -6060093 + NTS_DM Other Other 1 240 0 1 760 521 16 0 0 chrUextra 22944563 22944624 -6060032 + NTS_DM Other Other 1 61 -179 1 760 357 328 10 20 chrUextra 22944725 22945034 -6059622 - GTWIN_I LTR Gypsy -3778 2643 2442 1 760 5522 3 0 1 chrUextra 22945480 22946136 -6058520 + ROO_I LTR Pao 3844 4498 -3758 1 760 5694 0 0 1 chrUextra 22946236 22946892 -6057764 + FW_DM LINE Jockey 3410 4064 -628 1 760 1235 317 10 11 chrUextra 22947125 22947648 -6057008 + HMSBEAGLE_I LTR Gypsy 1440 1961 -4568 1 760 2350 206 15 14 chrUextra 22947749 22948404 -6056252 + SAR_DM Satellite Satellite 195 850 -622 1 760 3318 7 5 2 chrUextra 22949260 22949665 -6054991 + DM176_LTR LTR Gypsy 102 507 0 1 760 420 111 0 0 chrUextra 22949669 22949732 -6054924 + (TATG)n Simple_repeat Simple_repeat 2 64 0 1 760 1158 122 0 0 chrUextra 22949731 22949911 -6054745 + (TA)n Simple_repeat Simple_repeat 1 180 0 1 760 909 0 9 0 chrUextra 22950016 22950125 -6054531 - R1_DM LINE R1 -5246 110 1 1 760 4728 2 0 2 chrUextra 22950125 22950672 -6053984 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2087 1 760 1449 115 82 55 chrUextra 22950773 22951188 -6053468 + BATUMI_I LTR Pao 344 769 -7194 1 760 910 71 0 21 chrUextra 22951229 22951373 -6053283 + BATUMI_I LTR Pao 749 889 -7074 1 760 40 37 0 0 chrUextra 22951373 22951427 -6053229 + AT_rich Low_complexity Low_complexity 1 54 0 1 760 2918 33 53 0 chrUextra 22951528 22952184 -6052472 - R1_DM LINE R1 -2195 3161 2471 1 760 3326 236 34 15 chrUextra 22952284 22953694 -6050962 + SAR_DM Satellite Satellite 1 1437 -208 1 760 2606 52 57 3 chrUextra 22953796 22954163 -6050493 + PROTOP_A DNA P 719 1105 0 1 760 2950 178 8 6 chrUextra 22955320 22955964 -6048692 + SAR_DM Satellite Satellite 369 1013 -459 1 760 768 119 0 0 chrUextra 22956064 22956182 -6048474 + (CATA)n Simple_repeat Simple_repeat 3 120 0 1 760 2316 8 0 0 chrUextra 22956184 22956450 -6048206 - DMLTR5 LTR Gypsy 0 266 1 1 760 2319 0 0 0 chrUextra 22956450 22956720 -6047936 - HMSBEAGLE_I LTR Gypsy 0 6529 6260 1 760 441 0 0 0 chrUextra 22957427 22957476 -6047180 + (TTGTG)n Simple_repeat Simple_repeat 3 51 0 1 760 5525 14 17 0 chrUextra 22958332 22958988 -6045668 - Invader1_I LTR Gypsy -1837 1349 683 1 760 4108 71 6 7 chrUextra 22959089 22959744 -6044912 + G2_DM LINE Jockey 4 509 -2593 1 760 2450 60 6 3 chrUextra 22959844 22960179 -6044477 - R1_DM LINE R1 -5020 336 1 1 760 2319 28 0 7 chrUextra 22960212 22960499 -6044157 - R1_DM LINE R1 0 5356 5072 1 760 5633 3 0 0 chrUextra 22960600 22961256 -6043400 + DMRT1B LINE R1 4216 4871 -312 1 760 2437 94 31 9 chrUextra 22961356 22962010 -6042646 + DMSAT6 Satellite Satellite 1 668 -40 1 760 5527 0 0 0 chrUextra 22962871 22963524 -6041132 + LSU-rRNA_Dme rRNA rRNA 366 1018 -2882 1 760 32 0 0 0 chrUextra 22963714 22963746 -6040910 + AT_rich Low_complexity Low_complexity 1 32 0 1 760 3524 2 0 0 chrUextra 22963878 22964280 -6040376 + SSU-rRNA_Dme rRNA rRNA 1 402 -1593 1 760 4846 47 17 1 chrUextra 22964380 22965036 -6039620 - R1_DM LINE R1 -4102 1254 589 1 760 2684 185 9 8 chrUextra 22965136 22965774 -6038882 + SAR_DM Satellite Satellite 438 1076 -396 1 760 262 106 0 21 chrUextra 22966172 22966220 -6038436 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 760 351 49 65 16 chrUextra 22966242 22966304 -6038352 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 760 722 186 0 7 chrUextra 22966303 22966449 -6038207 - DMLTR5 LTR Gypsy 0 266 122 1 760 456 0 17 0 chrUextra 22966648 22966707 -6037949 + NOMAD_I LTR Gypsy 6513 6572 0 1 760 4456 6 0 0 chrUextra 22966707 22967225 -6037431 + NOMAD_LTR LTR Gypsy 1 518 0 1 760 501 83 0 0 chrUextra 22967232 22967304 -6037352 - PROTOP_A DNA P -857 248 177 1 760 3277 38 12 0 chrUextra 22967404 22967825 -6036831 - DIVER2_I LTR Pao -3 4144 3719 1 760 1485 38 0 99 chrUextra 22967802 22968035 -6036621 - DIVER2_I LTR Pao -2572 1575 1366 1 760 1673 0 5 0 chrUextra 22968161 22968355 -6036301 + LSU-rRNA_Dme rRNA rRNA 3706 3900 0 1 760 22 56 0 0 chrUextra 22968427 22968463 -6036193 + AT_rich Low_complexity Low_complexity 1 36 0 1 760 246 150 0 0 chrUextra 22968468 22968508 -6036148 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 760 246 150 0 0 chrUextra 22968560 22968600 -6036056 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 760 246 150 0 0 chrUextra 22968652 22968692 -6035964 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 760 255 125 0 0 chrUextra 22968735 22968775 -6035881 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 760 5480 14 1 0 chrUextra 22968916 22969572 -6035084 - Gypsy4_I LTR Gypsy -1670 4618 3962 1 760 2952 166 17 9 chrUextra 22969678 22970327 -6034329 + SAR_DM Satellite Satellite 326 979 -493 1 760 5644 1 0 0 chrUextra 22970428 22971084 -6033572 - FW_DM LINE Jockey -157 4535 3880 1 760 2824 170 14 11 chrUextra 22971185 22971816 -6032840 - SAR_DM Satellite Satellite -645 827 195 1 760 677 120 0 0 chrUextra 22971723 22971840 -6032816 + ARS406_DM Unknown Unknown 1 117 -236 1 760 2789 179 11 8 chrUextra 22971940 22972586 -6032070 + SAR_DM Satellite Satellite 256 903 -569 1 760 419 34 51 0 chrUextra 22972696 22972755 -6031901 + (TTCTC)n Simple_repeat Simple_repeat 1 62 0 1 760 2361 113 20 14 chrUextra 22974208 22974864 -6029792 - DMSAT6 Satellite Satellite -5 660 1 1 760 3158 157 9 9 chrUextra 22974964 22975620 -6029036 + SAR_DM Satellite Satellite 376 1031 -441 1 760 2481 100 9 17 chrUextra 22975734 22976375 -6028281 - DMSAT6 Satellite Satellite 0 636 1 1 760 5132 28 0 0 chrUextra 22977233 22977888 -6026768 - ACCORD2_I LTR Gypsy -400 6812 6158 1 760 220 141 46 15 chrUextra 22978092 22978157 -6026499 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 760 3288 3 0 0 chrUextra 22978744 22979124 -6025532 - FW_DM LINE Jockey -4312 380 1 1 760 1285 174 4 0 chrUextra 22979131 22979390 -6025266 + SAR_DM Satellite Satellite 632 891 -581 1 760 642 35 12 0 chrUextra 22979314 22979400 -6025256 - ARS406_DM Unknown Unknown -164 189 103 1 760 2612 197 9 9 chrUextra 22979504 22980156 -6024500 + SAR_DM Satellite Satellite 192 843 -629 1 760 891 100 12 24 chrUextra 22980258 22980912 -6023744 + RSP Satellite Satellite 1 646 0 1 760 746 25 32 32 chrUextra 22981012 22981136 -6023520 + NTS_DM Other Other 117 240 0 1 760 1734 21 17 17 chrUextra 22981136 22981376 -6023280 + NTS_DM Other Other 1 240 0 1 760 1850 4 17 13 chrUextra 22981376 22981615 -6023041 + NTS_DM Other Other 1 240 0 1 760 437 0 19 0 chrUextra 22981615 22981668 -6022988 + NTS_DM Other Other 1 54 -186 1 760 4824 12 0 0 chrUextra 22981856 22982424 -6022232 + Gypsy4_I LTR Gypsy 374 941 -5347 1 760 2559 196 5 20 chrUextra 22982524 22983176 -6021480 + SAR_DM Satellite Satellite 465 1106 -366 1 760 5052 43 8 3 chrUextra 22983280 22983936 -6020720 + R1_DM LINE R1 899 1557 -3799 1 760 846 258 119 58 chrUextra 22984042 22984673 -6019983 + Gypsy12_LTR LTR Gypsy 586 1255 -1081 1 760 2848 176 8 8 chrUextra 22984792 22985433 -6019223 + SAR_DM Satellite Satellite 297 937 -535 1 760 981 65 0 0 chrUextra 22985310 22985448 -6019208 - ARS406_DM Unknown Unknown -164 189 52 1 760 409 0 0 56 chrUextra 22985548 22985602 -6019054 - NTS_DM Other Other -165 75 25 1 760 1252 18 0 6 chrUextra 22985654 22985819 -6018837 - NTS_DM Other Other -39 201 38 1 760 870 9 0 27 chrUextra 22985819 22985931 -6018725 - NTS_DM Other Other -107 133 25 1 760 22 56 0 0 chrUextra 22985957 22985993 -6018663 + AT_rich Low_complexity Low_complexity 1 36 0 1 760 243 125 0 0 chrUextra 22986006 22986046 -6018610 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 760 246 150 0 0 chrUextra 22986089 22986129 -6018527 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 760 243 153 68 27 chrUextra 22986349 22986423 -6018233 + XDMR_DM Unknown Unknown 275 351 -9 1 760 2361 195 5 19 chrUextra 22986365 22986960 -6017696 - SAR_DM Satellite Satellite -371 1101 515 1 760 23 68 0 0 chrUextra 22987096 22987140 -6017516 + AT_rich Low_complexity Low_complexity 1 44 0 1 760 26 30 0 0 chrUextra 22987186 22987219 -6017437 + AT_rich Low_complexity Low_complexity 1 33 0 1 760 965 50 0 0 chrUextra 22987597 22987716 -6016940 - PROTOP DNA P 0 4480 4362 1 760 244 259 102 0 chrUextra 22988036 22988144 -6016512 - DMRT1C LINE R1 -4896 547 429 1 760 3013 168 8 9 chrUextra 22988572 22989228 -6015428 - SAR_DM Satellite Satellite -396 1076 422 1 760 5627 5 0 0 chrUextra 22989328 22989984 -6014672 + R1_DM LINE R1 1781 2436 -2920 1 760 2984 23 8 8 chrUextra 22990089 22990477 -6014179 - BATUMI_I LTR Pao -1149 6814 6427 1 760 1785 33 0 4 chrUextra 22990500 22990740 -6013916 + BATUMI_I LTR Pao 7303 7541 -422 1 760 22 56 0 0 chrUextra 22990882 22990918 -6013738 + AT_rich Low_complexity Low_complexity 1 36 0 1 760 870 9 0 27 chrUextra 22990944 22991056 -6013600 + NTS_DM Other Other 25 133 -107 1 760 1252 18 0 6 chrUextra 22991056 22991221 -6013435 + NTS_DM Other Other 38 201 -39 1 760 870 9 0 27 chrUextra 22991273 22991385 -6013271 + NTS_DM Other Other 25 133 -107 1 760 875 18 0 0 chrUextra 22991385 22991496 -6013160 + NTS_DM Other Other 38 148 -92 1 760 1429 166 23 7 chrUextra 22991596 22991905 -6012751 + SAR_DM Satellite Satellite 590 903 -569 1 760 657 53 53 0 chrUextra 22991820 22991915 -6012741 - ARS406_DM Unknown Unknown -164 189 90 1 760 1518 179 6 3 chrUextra 22991920 22992251 -6012405 + SAR_DM Satellite Satellite 496 827 -645 1 760 652 97 0 0 chrUextra 22992368 22992471 -6012185 + TART LINE telomeric 7780 7882 -6595 1 760 1834 169 39 5 chrUextra 22993109 22993764 -6010892 - SAR_DM Satellite Satellite -633 677 1 1 760 3075 160 11 11 chrUextra 22993864 22994520 -6010136 + SAR_DM Satellite Satellite 389 1044 -428 1 760 4851 8 72 0 chrUextra 22994620 22995276 -6009380 + STALKER4_I LTR Gypsy 3489 4191 -2339 1 760 4350 61 88 0 chrUextra 22995376 22996032 -6008624 - DM297_I LTR Gypsy -2291 3876 3163 1 760 411 127 0 0 chrUextra 22996134 22996205 -6008451 - ARS406_DM Unknown Unknown -282 71 1 1 760 2828 190 5 3 chrUextra 22996143 22996788 -6007868 + SAR_DM Satellite Satellite 224 869 -603 1 760 3751 11 139 0 chrUextra 22996888 22997544 -6007112 + QUASIMODO_I LTR Gypsy 398 1144 -4916 1 760 238 288 0 0 chrUextra 22997645 22997725 -6006931 - XDMR_DM Unknown Unknown -271 89 10 1 760 1186 271 40 37 chrUextra 22997654 22998298 -6006358 + SAR_DM Satellite Satellite 246 891 -581 1 760 1039 8 0 0 chrUextra 22998400 22998520 -6006136 - LSU-rRNA_Dme rRNA rRNA -1141 2759 2640 1 760 3798 0 0 0 chrUextra 22998518 22998954 -6005702 - R1_DM LINE R1 0 5356 4921 1 760 900 9 0 0 chrUextra 22998951 22999056 -6005600 - LSU-rRNA_Dme rRNA rRNA -1253 2647 2543 1 760 493 117 0 0 chrUextra 22999912 22999989 -6004667 + SAR_DM Satellite Satellite 600 676 -796 1 760 2314 172 36 20 chrUextra 23000006 23000568 -6004088 + SAR_DM Satellite Satellite 333 903 -569 1 760 263 57 0 0 chrUextra 23000668 23000703 -6003953 - R1_DM LINE R1 -2127 3229 3195 1 760 5095 27 0 0 chrUextra 23000701 23001324 -6003332 - R1_DM LINE R1 -2484 2872 2250 1 760 2782 167 34 14 chrUextra 23001424 23002080 -6002576 + SAR_DM Satellite Satellite 334 1002 -470 1 760 2403 85 12 34 chrUextra 23002180 23002836 -6001820 - DMSAT6 Satellite Satellite -33 641 1 1 760 5155 8 14 5 chrUextra 23002936 23003592 -6001064 + STALKER4_I LTR Gypsy 2729 3390 -3140 1 760 3017 163 9 9 chrUextra 23003698 23004348 -6000308 - SAR_DM Satellite Satellite -424 1048 399 1 760 2976 160 16 11 chrUextra 23004455 23005100 -5999556 - SAR_DM Satellite Satellite -426 1046 399 1 760 963 281 82 39 chrUextra 23005215 23005852 -5998804 + SAR_DM Satellite Satellite 495 1158 -314 1 760 2834 177 9 8 chrUextra 23005964 23006613 -5998043 - SAR_DM Satellite Satellite -577 895 246 1 760 3831 8 126 2 chrUextra 23006716 23007202 -5997454 + R1_DM LINE R1 4811 5356 0 1 760 998 58 7 0 chrUextra 23007235 23007372 -5997284 + R1_DM LINE R1 1 138 -5218 1 760 2686 189 8 8 chrUextra 23007472 23008112 -5996544 - SAR_DM Satellite Satellite -641 831 192 1 760 705 98 0 0 chrUextra 23008016 23008128 -5996528 + ARS406_DM Unknown Unknown 1 112 -241 1 760 2330 11 0 0 chrUextra 23008228 23008509 -5996147 + DOC2_DM LINE Jockey 4513 4793 0 1 760 1216 86 142 26 chrUextra 23008622 23008884 -5995772 + DOC2_DM LINE Jockey 6 257 -4435 1 760 955 9 8 8 chrUextra 23008992 23009110 -5995546 + BATUMI_I LTR Pao 2131 2248 -5715 1 760 4082 34 2 9 chrUextra 23009108 23009640 -5995016 + BATUMI_I LTR Pao 2909 3436 -4527 1 760 5597 3 0 0 chrUextra 23009740 23010396 -5994260 - R1_DM LINE R1 -2175 3181 2526 1 760 2780 176 10 6 chrUextra 23010496 23011120 -5993536 - SAR_DM Satellite Satellite -601 871 246 1 760 418 86 14 0 chrUextra 23011080 23011150 -5993506 + ARS406_DM Unknown Unknown 1 71 -282 1 760 2766 174 14 16 chrUextra 23011264 23011908 -5992748 - SAR_DM Satellite Satellite -396 1076 434 1 760 1403 144 41 79 chrUextra 23012008 23012491 -5992165 - HETA LINE telomeric -5427 654 190 1 760 991 116 0 11 chrUextra 23012490 23012664 -5991992 - TAHRE LINE telomeric -11 10452 10281 1 760 5706 1 0 1 chrUextra 23012764 23013420 -5991236 + DOC LINE Jockey 3642 4296 -429 1 760 4737 44 44 0 chrUextra 23013520 23014176 -5990480 + ZAM_I LTR Gypsy 3013 3697 -3793 1 760 2503 189 10 10 chrUextra 23014306 23014931 -5989725 - SAR_DM Satellite Satellite -396 1076 452 1 760 1620 11 5 0 chrUextra 23015033 23015241 -5989415 + (TCTTG)n Simple_repeat Simple_repeat 1 209 0 1 760 1131 84 0 0 chrUextra 23015241 23015419 -5989237 + (CATGT)n Simple_repeat Simple_repeat 3 180 0 1 760 266 78 39 0 chrUextra 23015419 23015441 -5989215 + (TCTTG)n Simple_repeat Simple_repeat 4 27 0 1 760 1008 99 0 0 chrUextra 23015441 23015688 -5988968 + (CATGT)n Simple_repeat Simple_repeat 1 247 0 1 760 2521 176 20 25 chrUextra 23015788 23016434 -5988222 + SAR_DM Satellite Satellite 477 1119 -353 1 760 365 174 21 11 chrUextra 23016351 23016444 -5988212 - XDMR_DM Unknown Unknown 0 360 267 1 760 5389 18 1 0 chrUextra 23016544 23017200 -5987456 - DMRT1B LINE R1 -2094 3089 2433 1 760 2644 194 17 25 chrUextra 23018056 23018712 -5985944 - SAR_DM Satellite Satellite -667 650 1 1 760 4714 0 2 0 chrUextra 23018812 23019350 -5985306 + SSU-rRNA_Dme rRNA rRNA 1457 1995 0 1 760 21 89 0 0 chrUextra 23019369 23019425 -5985231 + AT_rich Low_complexity Low_complexity 1 56 0 1 760 2914 179 8 6 chrUextra 23019575 23020223 -5984433 - SAR_DM Satellite Satellite -478 994 346 1 760 3517 52 44 0 chrUextra 23020325 23020823 -5983833 + PROTOP_A DNA P 586 1105 0 1 760 2823 70 5 17 chrUextra 23021133 23021539 -5983117 + Baggins1 LINE LOA 4791 5191 -262 1 760 579 53 0 0 chrUextra 23021836 23021911 -5982745 - Gypsy6_LTR LTR Gypsy -163 244 170 1 760 4789 9 2 3 chrUextra 23021927 23022492 -5982164 - SSU-rRNA_Dme rRNA rRNA -170 1825 1262 1 760 5354 8 57 0 chrUextra 23022592 23023246 -5981410 - R2_DM LINE R2 -2404 1203 513 1 760 3002 3 0 24 chrUextra 23023348 23023718 -5980938 + ROVER-LTR_DM LTR Gypsy 7 367 0 1 760 1368 0 0 255 chrUextra 23023718 23024004 -5980652 + ROVER-I_DM LTR Gypsy 1 213 -6371 1 760 5132 32 0 8 chrUextra 23024107 23024760 -5979896 - DOC3_DM LINE Jockey -1259 3481 2834 1 760 4013 29 62 1 chrUextra 23024860 23025516 -5979140 - R1_DM LINE R1 -1741 3615 2920 1 760 285 282 107 89 chrUextra 23025670 23025950 -5978706 - Invader1_LTR LTR Gypsy -55 368 84 1 760 439 162 186 18 chrUextra 23026159 23026272 -5978384 + DMLTR5 LTR Gypsy 44 175 -91 1 760 5603 8 0 0 chrUextra 23026372 23027028 -5977628 - Gypsy4_I LTR Gypsy -4236 2052 1397 1 760 26 30 0 0 chrUextra 23027239 23027272 -5977384 + AT_rich Low_complexity Low_complexity 1 33 0 1 760 953 17 25 0 chrUextra 23027666 23027784 -5976872 + PROTOP_B DNA P 55 175 -978 1 760 4686 19 27 0 chrUextra 23027885 23028473 -5976183 + DMCR1A LINE CR1 3791 4394 -76 1 760 5289 25 0 6 chrUextra 23029396 23030052 -5974604 - FW_DM LINE Jockey -160 4532 3881 1 760 2168 11 0 81 chrUextra 23030155 23030463 -5974193 + DM176_LTR LTR Gypsy 1 283 -224 1 760 2020 20 16 0 chrUextra 23030464 23030717 -5973939 + DM176_LTR LTR Gypsy 251 507 0 1 760 688 67 0 0 chrUextra 23030718 23030808 -5973848 - ZAM_I LTR Gypsy -6989 501 412 1 760 22 88 0 0 chrUextra 23033019 23033076 -5971580 + AT_rich Low_complexity Low_complexity 1 57 0 1 760 22 56 0 0 chrUextra 23033198 23033234 -5971422 + AT_rich Low_complexity Low_complexity 1 36 0 1 760 255 125 0 0 chrUextra 23033247 23033287 -5971369 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 760 21 36 0 0 chrUextra 23033289 23033317 -5971339 + AT_rich Low_complexity Low_complexity 1 28 0 1 760 246 150 0 0 chrUextra 23033330 23033370 -5971286 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 760 246 150 0 0 chrUextra 23033422 23033462 -5971194 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 760 246 150 0 0 chrUextra 23033514 23033554 -5971102 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 760 22 56 0 0 chrUextra 23033559 23033595 -5971061 + AT_rich Low_complexity Low_complexity 1 36 0 1 760 1444 0 0 0 chrUextra 23033667 23033831 -5970825 - LSU-rRNA_Dme rRNA rRNA 0 3900 3737 1 760 3325 191 0 0 chrUextra 23033931 23034585 -5970071 - ROVER-I_DM LTR Gypsy -2506 4078 3425 1 760 21 89 0 0 chrUextra 23034857 23034913 -5969743 + AT_rich Low_complexity Low_complexity 1 56 0 1 760 3545 0 2 2 chrUextra 23034932 23035341 -5969315 - SSU-rRNA_Dme rRNA rRNA 0 1995 1587 1 760 4199 97 70 8 chrUextra 23035441 23036096 -5968560 + Gypsy12_I LTR Gypsy 1280 1975 -3571 1 760 2117 32 41 28 chrUextra 23036196 23036487 -5968169 - PROTOP_A DNA P -810 295 1 1 760 2309 87 0 25 chrUextra 23036487 23036851 -5967805 - TART LINE telomeric -13268 1209 855 1 760 5594 5 0 0 chrUextra 23036951 23037606 -5967050 + FW_DM LINE Jockey 306 960 -3732 1 760 2900 168 18 11 chrUextra 23037706 23038361 -5966295 + SAR_DM Satellite Satellite 409 1068 -404 1 760 3213 41 41 8 chrUextra 23039225 23039870 -5964786 - PROTOP DNA P -339 766 235 1 760 4530 47 43 9 chrUextra 23039971 23040615 -5964041 - PROTOP DNA P -3767 713 48 1 760 246 150 0 0 chrUextra 23041503 23041543 -5963113 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 760 255 125 0 0 chrUextra 23041586 23041626 -5963030 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 760 22 56 0 0 chrUextra 23041639 23041675 -5962981 + AT_rich Low_complexity Low_complexity 1 36 0 1 760 870 9 0 27 chrUextra 23041701 23041813 -5962843 + NTS_DM Other Other 25 133 -107 1 760 1252 18 0 6 chrUextra 23041813 23041978 -5962678 + NTS_DM Other Other 38 201 -39 1 760 751 29 9 28 chrUextra 23042030 23042136 -5962520 + NTS_DM Other Other 25 128 -112 1 760 3128 122 92 21 chrUextra 23042236 23042844 -5961812 + TART LINE telomeric 7150 7726 -6751 1 760 257 64 62 21 chrUextra 23042843 23042891 -5961765 + HETA LINE telomeric 5651 5700 -381 1 760 1847 4 17 13 chrUextra 23043005 23043244 -5961412 - NTS_DM Other Other 0 240 1 1 760 1861 0 17 13 chrUextra 23043244 23043483 -5961173 - NTS_DM Other Other 0 240 1 1 760 1102 0 31 19 chrUextra 23043483 23043645 -5961011 - NTS_DM Other Other 0 240 77 1 760 1534 101 49 56 chrUextra 23043747 23044071 -5960585 + ROVER-LTR_DM LTR Gypsy 46 367 0 1 760 833 171 7 160 chrUextra 23044071 23044378 -5960278 + ROVER-I_DM LTR Gypsy 1 260 -6324 1 760 2608 222 14 12 chrUextra 23044513 23045156 -5959500 + ROVER-I_DM LTR Gypsy 1823 2466 -4118 1 760 5445 17 5 0 chrUextra 23045256 23045911 -5958745 - Copia2_I LTR Copia -1386 2776 2119 1 760 228 152 0 0 chrUextra 23046766 23046812 -5957844 - ARS406_DM Unknown Unknown -307 46 1 1 760 3061 173 5 5 chrUextra 23046772 23047418 -5957238 + SAR_DM Satellite Satellite 246 891 -581 1 760 1940 134 16 9 chrUextra 23047521 23048056 -5956600 - G2_DM LINE Jockey -2868 234 4 1 760 335 44 0 0 chrUextra 23048067 23048112 -5956544 + DOC5_DM LINE Jockey 2765 2809 -1873 1 760 2881 180 6 9 chrUextra 23048277 23048927 -5955729 - SAR_DM Satellite Satellite -426 1046 399 1 760 2943 182 6 3 chrUextra 23049035 23049679 -5954977 - SAR_DM Satellite Satellite -581 891 246 1 760 1233 6 23 17 chrUextra 23049786 23049960 -5954696 + NTS_DM Other Other 66 240 0 1 760 1301 6 0 18 chrUextra 23049960 23050125 -5954531 + NTS_DM Other Other 1 162 -78 1 760 476 131 36 0 chrUextra 23050235 23050319 -5954337 + NTS_DM Other Other 4 90 -150 1 760 2828 173 12 9 chrUextra 23050543 23051186 -5953470 + SAR_DM Satellite Satellite 293 937 -535 1 760 2832 185 6 6 chrUextra 23051296 23051943 -5952713 - SAR_DM Satellite Satellite -542 930 284 1 760 939 0 0 0 chrUextra 23052051 23052159 -5952497 - NTS_DM Other Other -132 108 1 1 760 1861 0 17 13 chrUextra 23052159 23052398 -5952258 - NTS_DM Other Other 0 240 1 1 760 1252 18 0 6 chrUextra 23052480 23052645 -5952011 - NTS_DM Other Other -39 201 38 1 760 467 16 0 0 chrUextra 23052645 23052706 -5951950 - NTS_DM Other Other -107 133 73 1 760 2649 168 22 14 chrUextra 23052812 23053440 -5951216 - SAR_DM Satellite Satellite -514 958 326 1 760 3015 165 11 8 chrUextra 23053569 23054216 -5950440 + SAR_DM Satellite Satellite 369 1017 -455 1 760 2089 4 0 39 chrUextra 23054316 23054596 -5950060 - PROTOP_A DNA P -390 715 447 1 760 2706 28 0 0 chrUextra 23054604 23054931 -5949725 - PROTOP_A DNA P -778 327 1 1 760 405 196 0 10 chrUextra 23055071 23055169 -5949487 + DMLTR5 LTR Gypsy 170 266 0 1 760 351 85 661 14 chrUextra 23055168 23055300 -5949356 + HMSBEAGLE_I LTR Gypsy 1 221 -6308 1 760 4709 23 0 3 chrUextra 23055826 23056404 -5948252 - R1_DM LINE R1 -2843 2513 1938 1 760 620 55 0 21 chrUextra 23056388 23056481 -5948175 - R1_DM LINE R1 -4741 615 525 1 760 5655 1 0 0 chrUextra 23056581 23057236 -5947420 + R1_DM LINE R1 2715 3369 -1987 1 760 5460 9 1 1 chrUextra 23057336 23057991 -5946665 + STALKER4_I LTR Gypsy 4421 5075 -1455 1 760 1670 0 5 0 chrUextra 23058091 23058292 -5946364 + DM176_I LTR Gypsy 6219 6420 0 1 760 3343 12 11 53 chrUextra 23058292 23058746 -5945910 + DM176_LTR LTR Gypsy 1 435 -72 1 760 1629 181 60 28 chrUextra 23058850 23059476 -5945180 - SAR_DM Satellite Satellite -493 645 1 1 760 256 0 0 0 chrUextra 23059601 23059633 -5945023 + PROTOP_B DNA P 1122 1153 0 1 760 775 263 22 107 chrUextra 23059656 23060254 -5944402 + Gypsy12_LTR LTR Gypsy 402 948 -1388 1 760 4535 73 6 8 chrUextra 23061112 23061762 -5942894 - R1_DM LINE R1 -4685 671 23 1 760 407 179 12 0 chrUextra 23061867 23061951 -5942705 + DM176_I LTR Gypsy 4197 4281 -2139 1 760 1111 29 0 0 chrUextra 23061950 23062087 -5942569 - DMCR1A LINE CR1 -3534 936 800 1 760 2588 31 30 103 chrUextra 23062085 23062521 -5942135 - DMCR1A LINE CR1 -4063 407 4 1 760 2751 167 22 13 chrUextra 23062621 23063257 -5941399 - SAR_DM Satellite Satellite -505 967 326 1 760 5350 5 0 0 chrUextra 23063376 23064031 -5940625 - QUASIMODO_I LTR Gypsy -964 5096 4442 1 760 5106 14 9 0 chrUextra 23064131 23064784 -5939872 + QUASIMODO_I LTR Gypsy 4355 5013 -1047 1 760 23 50 0 48 chrUextra 23065380 23065443 -5939213 + AT_rich Low_complexity Low_complexity 1 60 0 1 760 1367 28 0 0 chrUextra 23065641 23065819 -5938837 + G2_DM LINE Jockey 2922 3099 -3 1 760 3715 10 47 0 chrUextra 23065811 23066296 -5938360 - STALKER4_I LTR Gypsy -2859 3671 3164 1 760 3547 5 0 5 chrUextra 23066396 23066815 -5937841 - DM412B_LTR LTR Gypsy -154 417 1 1 760 530 9 130 4 chrUextra 23066815 23067046 -5937610 + (TA)n Simple_repeat Simple_repeat 1 260 0 1 760 1560 6 0 0 chrUextra 23067151 23067328 -5937328 + (ATAAG)n Simple_repeat Simple_repeat 1 177 0 1 760 1536 18 0 0 chrUextra 23067328 23067547 -5937109 + (GAGAA)n Simple_repeat Simple_repeat 1 219 0 1 760 5272 26 17 1 chrUextra 23067906 23068561 -5936095 + R1_DM LINE R1 1474 2138 -3218 1 11 2764 183 9 5 chrUextra 23068661 23069292 -5935364 - SAR_DM Satellite Satellite -593 879 246 1 761 383 109 0 0 chrUextra 23069252 23069316 -5935340 + ARS406_DM Unknown Unknown 1 64 -289 1 761 2761 182 21 11 chrUextra 23069417 23070071 -5934585 + SAR_DM Satellite Satellite 371 1031 -441 1 761 2275 17 0 0 chrUextra 23070171 23070461 -5934195 + DOC LINE Jockey 4436 4725 0 1 761 1634 166 11 11 chrUextra 23070466 23070826 -5933830 - SAR_DM Satellite Satellite -478 994 635 1 761 5537 6 0 0 chrUextra 23070926 23071581 -5933075 + FW_DM LINE Jockey 168 822 -3870 1 761 482 216 23 40 chrUextra 23071790 23071964 -5932692 + DNAREP1_DM LINE Penelope 146 316 -278 1 761 333 281 7 7 chrUextra 23071960 23072096 -5932560 - DNAREP1_DM LINE Penelope -291 303 168 1 761 26 30 0 0 chrUextra 23072112 23072145 -5932511 + AT_rich Low_complexity Low_complexity 1 33 0 1 761 422 240 0 0 chrUextra 23072240 23072336 -5932320 + DMCR1A LINE CR1 850 945 -3525 1 761 2223 78 5 85 chrUextra 23072440 23073088 -5931568 + DMSAT6 Satellite Satellite 1 596 -159 1 761 5704 0 1 0 chrUextra 23073191 23073846 -5930810 - DIVER_I LTR Pao -2143 3500 2845 1 761 5726 1 1 0 chrUextra 23073946 23074601 -5930055 + LSU-rRNA_Dme rRNA rRNA 3010 3665 -235 1 761 4806 41 9 0 chrUextra 23074701 23075356 -5929300 + Invader2_I LTR Gypsy 1437 2097 -2495 1 761 21 89 0 0 chrUextra 23076769 23076825 -5927831 + AT_rich Low_complexity Low_complexity 1 56 0 1 761 5627 1 0 1 chrUextra 23076966 23077621 -5927035 - FW_DM LINE Jockey -905 3787 3134 1 761 2728 186 23 9 chrUextra 23077721 23078376 -5926280 + SAR_DM Satellite Satellite 195 858 -614 1 761 494 56 0 27 chrUextra 23078506 23078579 -5926077 - PROTOP DNA P -1500 2980 2910 1 761 2674 57 114 2 chrUextra 23078603 23079008 -5925648 - PROTOP DNA P -3981 499 50 1 761 3040 165 12 9 chrUextra 23079231 23079885 -5924771 - SAR_DM Satellite Satellite -446 1026 371 1 761 233 149 0 21 chrUextra 23080158 23080206 -5924450 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 761 244 128 0 21 chrUextra 23080451 23080499 -5924157 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 761 2719 185 6 9 chrUextra 23080742 23081380 -5923276 - SAR_DM Satellite Satellite -645 827 192 1 761 664 116 0 0 chrUextra 23081284 23081396 -5923260 + ARS406_DM Unknown Unknown 1 112 -241 1 761 2625 179 12 26 chrUextra 23081497 23082151 -5922505 + SAR_DM Satellite Satellite 469 1113 -359 1 761 69 13 0 0 chrUextra 23082812 23082888 -5921768 + AT_rich Low_complexity Low_complexity 1 76 0 1 761 2517 88 22 13 chrUextra 23083016 23083653 -5921003 + DMSAT6 Satellite Satellite 1 642 0 1 761 258 0 0 81 chrUextra 23083761 23083798 -5920858 - NTS_DM Other Other -182 58 25 1 761 21 57 0 0 chrUextra 23083824 23083859 -5920797 + AT_rich Low_complexity Low_complexity 1 35 0 1 761 1252 18 0 6 chrUextra 23083859 23084024 -5920632 - NTS_DM Other Other -39 201 38 1 761 870 9 0 27 chrUextra 23084024 23084136 -5920520 - NTS_DM Other Other -107 133 25 1 761 1229 24 0 6 chrUextra 23084188 23084353 -5920303 - NTS_DM Other Other -39 201 38 1 761 449 17 0 0 chrUextra 23084353 23084413 -5920243 - NTS_DM Other Other -107 133 74 1 761 2846 180 8 6 chrUextra 23084524 23085171 -5919485 - SAR_DM Satellite Satellite -569 903 256 1 761 2492 85 18 14 chrUextra 23085271 23085926 -5918730 - DMSAT6 Satellite Satellite 0 657 1 1 761 655 186 7 14 chrUextra 23086134 23086276 -5918380 - HETRP_DM Satellite Satellite -203 1669 1529 1 761 629 193 7 14 chrUextra 23086411 23086553 -5918103 - HETRP_DM Satellite Satellite -203 1669 1529 1 761 34 24 0 0 chrUextra 23086785 23086826 -5917830 + AT_rich Low_complexity Low_complexity 1 41 0 1 761 21 95 0 0 chrUextra 23087040 23087103 -5917553 + AT_rich Low_complexity Low_complexity 1 63 0 1 761 2405 0 0 78 chrUextra 23087115 23087436 -5917220 + LSU-rRNA_Dme rRNA rRNA 1 296 -3604 1 761 662 200 6 19 chrUextra 23087588 23087746 -5916910 - HETRP_DM Satellite Satellite -188 1684 1529 1 761 491 208 8 16 chrUextra 23087909 23088031 -5916625 - HETRP_DM Satellite Satellite -203 1669 1549 1 761 192 40 0 0 chrUextra 23088031 23088056 -5916600 + (TC)n Simple_repeat Simple_repeat 2 26 0 1 761 5608 0 1 1 chrUextra 23088291 23088946 -5915710 + LSU-rRNA_Dme rRNA rRNA 617 1271 -2629 1 761 280 344 13 6 chrUextra 23089142 23089300 -5915356 + BLASTOPIA_I LTR Gypsy 3541 3699 -782 1 761 2935 187 5 5 chrUextra 23089801 23090456 -5914200 + SAR_DM Satellite Satellite 392 1046 -426 1 761 5283 35 0 0 chrUextra 23090556 23091211 -5913445 - R1_DM LINE R1 -2541 2815 2161 1 761 329 43 0 0 chrUextra 23091311 23091357 -5913299 + R1_DM LINE R1 568 613 -4743 1 761 4282 48 38 3 chrUextra 23091360 23091940 -5912716 + R1_DM LINE R1 1000 1599 -3757 1 761 226 0 0 0 chrUextra 23091940 23091966 -5912690 + STALKER4_LTR LTR Gypsy 1 26 -376 1 761 2433 178 19 26 chrUextra 23092066 23092684 -5911972 - SAR_DM Satellite Satellite -668 804 191 1 761 562 218 0 0 chrUextra 23092587 23092720 -5911936 + ARS406_DM Unknown Unknown 1 133 -220 1 761 5435 9 5 3 chrUextra 23092821 23093476 -5911180 + LSU-rRNA_Dme rRNA rRNA 1107 1762 -2138 1 761 2809 182 8 9 chrUextra 23093587 23094231 -5910425 - SAR_DM Satellite Satellite -396 1076 434 1 761 262 0 0 0 chrUextra 23094331 23094364 -5910292 + HOBO DNA hAT 2984 3016 0 1 761 3030 3 0 0 chrUextra 23095086 23095434 -5909222 + R1_DM LINE R1 5009 5356 0 1 761 2659 3 3 0 chrUextra 23095432 23095741 -5908915 + LSU-rRNA_Dme rRNA rRNA 2640 2949 -951 1 761 5310 6 3 0 chrUextra 23095841 23096496 -5908160 - MAX_I LTR Pao -7025 889 233 1 761 5584 5 0 0 chrUextra 23096596 23097251 -5907405 + R1_DM LINE R1 2791 3445 -1911 1 761 2010 46 8 4 chrUextra 23097351 23097613 -5907043 + STALKER4_LTR LTR Gypsy 117 379 -23 1 761 28 48 0 0 chrUextra 23097751 23097793 -5906863 + AT_rich Low_complexity Low_complexity 1 42 0 1 761 748 234 5 5 chrUextra 23097800 23098006 -5906650 + Stalker2_I LTR Gypsy 291 496 -6906 1 761 2638 183 8 10 chrUextra 23098106 23098723 -5905933 - SAR_DM Satellite Satellite -662 810 195 1 761 769 107 0 8 chrUextra 23098629 23098761 -5905895 + ARS406_DM Unknown Unknown 1 131 -222 1 761 2704 6 3 0 chrUextra 23098861 23099209 -5905447 + QUASIMODO_I LTR Gypsy 5712 6060 0 1 761 2550 0 13 0 chrUextra 23099209 23099516 -5905140 + QUASIMODO_LTR LTR Gypsy 1 311 -347 1 761 1474 27 0 0 chrUextra 23099616 23099800 -5904856 - MICROPIA_LTR LTR Gypsy -292 184 1 1 761 3978 0 0 2 chrUextra 23099800 23100271 -5904385 - MICROPIA_I LTR Gypsy 0 4476 4007 1 761 814 37 0 27 chrUextra 23100373 23100485 -5904171 - NTS_DM Other Other -107 133 25 1 761 1252 18 0 6 chrUextra 23100537 23100702 -5903954 - NTS_DM Other Other -39 201 38 1 761 870 9 0 27 chrUextra 23100702 23100814 -5903842 - NTS_DM Other Other -107 133 25 1 761 1148 19 12 6 chrUextra 23100866 23101026 -5903630 - NTS_DM Other Other -39 201 41 1 761 5359 8 18 0 chrUextra 23101126 23101781 -5902875 - DM176_I LTR Gypsy -3708 2712 2046 1 761 2623 176 32 11 chrUextra 23101887 23102536 -5902120 - SAR_DM Satellite Satellite -512 960 298 1 761 4630 0 0 2 chrUextra 23102636 23103168 -5901488 - DIVER_I LTR Pao -996 4647 4117 1 761 1041 16 0 0 chrUextra 23103168 23103291 -5901365 + (TTTTG)n Simple_repeat Simple_repeat 5 127 0 1 761 2802 171 31 11 chrUextra 23103401 23104046 -5900610 - SAR_DM Satellite Satellite -396 1076 419 1 761 573 0 0 0 chrUextra 23104146 23104215 -5900441 - HMSBEAGLE_I LTR Gypsy -5492 1037 969 1 761 974 29 52 12 chrUextra 23104215 23104387 -5900269 + (TAA)n Simple_repeat Simple_repeat 1 179 0 1 761 3168 0 0 5 chrUextra 23104387 23104801 -5899855 - HMSBEAGLE_I LTR Gypsy -5733 796 385 1 761 4525 95 3 6 chrUextra 23104901 23105556 -5899100 + Gypsy12_I LTR Gypsy 1201 1853 -3693 1 761 5398 17 6 1 chrUextra 23105656 23106311 -5898345 + R1_DM LINE R1 3657 4314 -1042 1 761 5630 1 1 3 chrUextra 23106411 23107066 -5897590 + SSU-rRNA_Dme rRNA rRNA 1018 1671 -324 1 761 2936 177 9 8 chrUextra 23107166 23107821 -5896835 + SAR_DM Satellite Satellite 413 1068 -404 1 761 2597 31 0 3 chrUextra 23107921 23108242 -5896414 + DMRT1B LINE R1 3292 3611 -1572 1 761 2786 21 3 0 chrUextra 23108236 23108576 -5896080 + DMRT1B LINE R1 3718 4058 -1125 1 761 5636 0 1 3 chrUextra 23108676 23109331 -5895325 + SSU-rRNA_Dme rRNA rRNA 614 1267 -728 1 761 5662 1 1 1 chrUextra 23109431 23110086 -5894570 - SSU-rRNA_Dme rRNA rRNA -724 1271 617 1 761 1373 0 12 0 chrUextra 23110186 23110349 -5894307 + SSU-rRNA_Dme rRNA rRNA 1831 1995 0 1 761 21 89 0 0 chrUextra 23110368 23110424 -5894232 + AT_rich Low_complexity Low_complexity 1 56 0 1 761 2290 181 46 21 chrUextra 23110941 23111596 -5893060 - SAR_DM Satellite Satellite -674 671 1 1 761 2001 177 120 32 chrUextra 23111719 23112350 -5892306 - TART LINE telomeric -4751 9726 9040 1 761 2871 176 12 9 chrUextra 23113961 23114616 -5890040 - SAR_DM Satellite Satellite -532 940 284 1 761 5359 9 0 0 chrUextra 23114716 23115371 -5889285 + STALKER4_I LTR Gypsy 2923 3577 -2953 1 761 5580 5 2 0 chrUextra 23115471 23116116 -5888540 + R2_DM LINE R2 2231 2876 -731 1 761 264 0 80 60 chrUextra 23116226 23116276 -5888380 + NTS_DM Other Other 190 240 0 1 761 1847 4 17 13 chrUextra 23116276 23116515 -5888141 + NTS_DM Other Other 1 240 0 1 761 1301 6 0 18 chrUextra 23116515 23116680 -5887976 + NTS_DM Other Other 1 162 -78 1 761 463 131 36 0 chrUextra 23116790 23116874 -5887782 + NTS_DM Other Other 4 90 -150 1 761 5630 0 0 1 chrUextra 23116981 23117636 -5887020 - LSU-rRNA_Dme rRNA rRNA -2642 1258 605 1 761 5410 1 3 0 chrUextra 23117736 23118391 -5886265 + Invader2_I LTR Gypsy 2153 2809 -1783 1 761 5418 23 1 0 chrUextra 23118491 23119146 -5885510 - FW_DM LINE Jockey -3383 1309 654 1 761 2863 184 9 6 chrUextra 23119254 23119901 -5884755 - SAR_DM Satellite Satellite -569 903 255 1 761 1620 28 0 0 chrUextra 23120001 23120542 -5884114 + (AGATG)n Simple_repeat Simple_repeat 1 541 0 1 761 261 162 0 0 chrUextra 23120549 23120617 -5884039 + (ACATG)n Simple_repeat Simple_repeat 5 72 0 1 761 4732 34 8 17 chrUextra 23120756 23121411 -5883245 + Gypsy12_LTR LTR Gypsy 1185 1833 -503 1 761 362 53 0 18 chrUextra 23121512 23121569 -5883087 + ARS406_DM Unknown Unknown 103 158 -195 1 761 2557 155 30 14 chrUextra 23121576 23122145 -5882511 - SAR_DM Satellite Satellite -569 903 326 1 761 3106 165 8 8 chrUextra 23122266 23122920 -5881736 + SAR_DM Satellite Satellite 389 1042 -430 1 761 1739 0 5 0 chrUextra 23123021 23123222 -5881434 + LSU-rRNA_Dme rRNA rRNA 2431 2632 -1268 1 761 3874 0 4 2 chrUextra 23123222 23123676 -5880980 + R1_DM LINE R1 1 455 -4901 1 761 488 119 36 0 chrUextra 23123877 23123961 -5880695 + NTS_DM Other Other 4 90 -150 1 761 28 48 0 0 chrUextra 23124234 23124276 -5880380 + AT_rich Low_complexity Low_complexity 1 42 0 1 761 5120 0 3 38 chrUextra 23124531 23125186 -5879470 - LSU-rRNA_Dme rRNA rRNA -3082 818 187 1 761 5619 1 1 1 chrUextra 23125287 23125941 -5878715 + LSU-rRNA_Dme rRNA rRNA 692 1345 -2555 1 761 5424 12 0 1 chrUextra 23126796 23127451 -5877205 + NINJA_I LTR Pao 844 1497 -4514 1 761 2002 32 3 34 chrUextra 23127565 23127857 -5876799 + BATUMI_I LTR Pao 7002 7284 -679 1 761 1884 91 97 29 chrUextra 23127857 23128206 -5876450 + BATUMI_I LTR Pao 1 373 -7590 1 761 306 302 19 19 chrUextra 23128326 23128488 -5876168 + MDG3_I LTR Gypsy 3263 3424 -1562 1 761 5529 3 0 0 chrUextra 23129061 23129716 -5874940 + LSU-rRNA_Dme rRNA rRNA 440 1094 -2806 1 761 2440 48 18 0 chrUextra 23130138 23130471 -5874185 - IDEFIX_I LTR Gypsy -1793 3835 3497 1 761 1699 63 99 64 chrUextra 23130571 23131008 -5873648 + MDG1_I LTR Gypsy 6008 6596 0 1 761 383 68 17 0 chrUextra 23131024 23131083 -5873573 + (TAA)n Simple_repeat Simple_repeat 3 62 0 1 761 898 84 23 0 chrUextra 23131095 23131226 -5873430 + MDG1_LTR LTR Gypsy 123 256 -186 1 761 1412 83 78 14 chrUextra 23131329 23131548 -5873108 + Gypsy12_I LTR Gypsy 5314 5546 0 1 761 1613 204 18 20 chrUextra 23131560 23131961 -5872695 + Gypsy12_LTR LTR Gypsy 13 412 -1924 1 761 2944 175 9 8 chrUextra 23132083 23132735 -5871921 + SAR_DM Satellite Satellite 352 1004 -468 1 761 192 40 0 0 chrUextra 23132971 23132996 -5871660 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 761 491 208 8 16 chrUextra 23132996 23133118 -5871538 + HETRP_DM Satellite Satellite 1549 1669 -203 1 761 662 200 6 19 chrUextra 23133287 23133445 -5871211 + HETRP_DM Satellite Satellite 1529 1684 -188 1 761 2370 176 64 14 chrUextra 23133589 23134241 -5870415 + SAR_DM Satellite Satellite 1 684 -208 1 761 588 6 0 137 chrUextra 23135101 23135306 -5869350 + (TAAAAA)n Simple_repeat Simple_repeat 2 178 0 1 761 208 132 132 0 chrUextra 23135254 23135337 -5869319 + (CAAA)n Simple_repeat Simple_repeat 2 95 0 1 761 2821 179 11 9 chrUextra 23137365 23138013 -5866643 + SAR_DM Satellite Satellite 282 930 -542 1 761 2795 179 6 8 chrUextra 23138114 23138745 -5865911 - SAR_DM Satellite Satellite -645 827 198 1 761 640 125 0 0 chrUextra 23138655 23138767 -5865889 + ARS406_DM Unknown Unknown 1 112 -241 1 761 1515 191 15 3 chrUextra 23139629 23140275 -5864381 - SAR_DM Satellite Satellite -839 654 1 1 761 5741 1 0 0 chrUextra 23140375 23141029 -5863627 - SSU-rRNA_Dme rRNA rRNA -1118 877 224 1 761 4832 39 0 18 chrUextra 23141129 23141783 -5862873 + BATUMI_I LTR Pao 2655 3296 -4667 1 761 908 67 6 18 chrUextra 23141888 23142535 -5862121 + RSP Satellite Satellite 1 639 0 1 761 5408 21 14 0 chrUextra 23142637 23143291 -5861365 + CIRCE LINE Composite 5514 6176 -180 1 761 5572 5 1 0 chrUextra 23143391 23144039 -5860617 - LSU-rRNA_Dme rRNA rRNA -1464 2436 1788 1 761 1157 15 0 0 chrUextra 23144313 23144448 -5860208 - 5S_DM RNA RNA 0 135 1 1 761 1076 0 8 0 chrUextra 23144672 23144799 -5859857 - 5S_DM RNA RNA 0 135 8 1 761 230 23 0 0 chrUextra 23144899 23144942 -5859714 + S_DM DNA Tc1 95 137 -1599 1 761 186 71 0 0 chrUextra 23144942 23144970 -5859686 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 1 761 4727 0 0 0 chrUextra 23144970 23145553 -5859103 - DOC6_DM LINE Jockey -6 4216 3634 1 761 5453 21 0 0 chrUextra 23145653 23146307 -5858349 + R1_DM LINE R1 1956 2609 -2747 1 761 238 0 129 0 chrUextra 23146561 23146623 -5858033 + (CAGG)n Simple_repeat Simple_repeat 2 71 0 1 761 1146 0 0 7 chrUextra 23146624 23146760 -5857896 - 5S_DM RNA RNA 0 135 1 1 761 526 16 0 0 chrUextra 23146998 23147061 -5857595 - 5S_DM RNA RNA 0 135 73 1 761 4734 45 93 8 chrUextra 23147161 23147815 -5856841 - R1_DM LINE R1 -3607 1749 1040 1 761 5048 3 0 0 chrUextra 23148669 23149249 -5855407 + LSU-rRNA_Dme rRNA rRNA 2053 2632 -1268 1 761 584 0 27 0 chrUextra 23149249 23149323 -5855333 + R1_DM LINE R1 1 76 -5280 1 761 2735 164 35 21 chrUextra 23149423 23150077 -5854579 - SAR_DM Satellite Satellite -543 929 267 1 761 5319 23 0 1 chrUextra 23150177 23150831 -5853825 - R1_DM LINE R1 -1818 3538 2886 1 761 2711 177 48 14 chrUextra 23150932 23151585 -5853071 + SAR_DM Satellite Satellite 246 920 -552 1 761 5216 34 0 0 chrUextra 23151685 23152339 -5852317 + R1_DM LINE R1 2496 3149 -2207 1 761 2778 189 8 8 chrUextra 23152439 23153091 -5851565 + SAR_DM Satellite Satellite 410 1061 -411 1 761 733 174 0 0 chrUextra 23153193 23153337 -5851319 - ARS406_DM Unknown Unknown -209 144 1 1 761 3000 226 29 44 chrUextra 23153234 23154148 -5850508 + SAR_DM Satellite Satellite 1 953 -745 1 761 283 147 63 51 chrUextra 23154148 23154227 -5850429 - XDMR Unknown Unknown 0 361 282 1 761 3000 226 29 44 chrUextra 23154227 23154601 -5850055 + SAR_DM Satellite Satellite 954 1345 -353 1 761 5668 5 0 0 chrUextra 23154701 23155355 -5849301 + MDG3_I LTR Gypsy 948 1601 -3385 1 761 3297 3 0 0 chrUextra 23155732 23156109 -5848547 - ROO_LTR LTR Pao 0 428 52 1 761 2834 179 11 9 chrUextra 23156210 23156857 -5847799 + SAR_DM Satellite Satellite 282 929 -543 1 761 2976 172 9 8 chrUextra 23156963 23157614 -5847042 - SAR_DM Satellite Satellite -539 933 282 1 761 5362 23 1 0 chrUextra 23157717 23158369 -5846287 - R1_DM LINE R1 -1655 3701 3049 1 761 4767 32 2 3 chrUextra 23158471 23159070 -5845586 + R1_DM LINE R1 4672 5269 -87 1 761 335 130 0 0 chrUextra 23159071 23159125 -5845531 + R1_DM LINE R1 77 130 -5226 1 761 4881 11 6 9 chrUextra 23159225 23159879 -5844777 + STALKER4_I LTR Gypsy 5807 6458 -72 1 761 2454 154 173 28 chrUextra 23159979 23160633 -5844023 - TART LINE telomeric -7409 7068 6320 1 761 3937 42 0 27 chrUextra 23160869 23161387 -5843269 - Baggins1 LINE LOA 0 5453 4950 1 761 870 24 0 8 chrUextra 23161487 23161614 -5843042 + NTS_DM Other Other 76 201 -39 1 761 21 57 0 0 chrUextra 23161614 23161649 -5843007 + AT_rich Low_complexity Low_complexity 1 35 0 1 761 806 19 9 27 chrUextra 23161675 23161786 -5842870 + NTS_DM Other Other 25 133 -107 1 761 1438 15 20 20 chrUextra 23161786 23161989 -5842667 + NTS_DM Other Other 38 240 0 1 761 1229 20 0 0 chrUextra 23161989 23162141 -5842515 + NTS_DM Other Other 1 152 -88 1 761 5527 0 1 0 chrUextra 23162241 23162895 -5841761 + ROO_I LTR Pao 4737 5391 -2865 1 761 1772 0 5 0 chrUextra 23162995 23163204 -5841452 - STALKER4_LTR LTR Gypsy -192 210 1 1 761 3291 16 9 2 chrUextra 23163204 23163649 -5841007 - STALKER4_I LTR Gypsy 0 6530 6083 1 761 1659 170 13 11 chrUextra 23163761 23164142 -5840514 + SAR_DM Satellite Satellite 369 750 -722 1 761 1985 12 0 20 chrUextra 23164150 23164403 -5840253 - DOC2_DM LINE Jockey 0 4793 4546 1 761 210 225 21 53 chrUextra 23164784 23164878 -5839778 + (TATAA)n Simple_repeat Simple_repeat 2 92 0 1 761 22 0 0 0 chrUextra 23165030 23165052 -5839604 + AT_rich Low_complexity Low_complexity 1 22 0 1 761 234 0 0 0 chrUextra 23165120 23165146 -5839510 + (T)n Simple_repeat Simple_repeat 1 26 0 1 761 759 40 0 0 chrUextra 23165259 23165358 -5839298 + (CTTAT)n Simple_repeat Simple_repeat 5 103 0 1 761 2295 4 0 0 chrUextra 23165359 23165626 -5839030 - MDG3_LTR LTR Gypsy 0 267 1 1 761 2306 3 0 0 chrUextra 23165626 23165911 -5838745 - MDG3_I LTR Gypsy 0 4986 4702 1 761 2469 184 30 16 chrUextra 23166011 23166659 -5837997 + SAR_DM Satellite Satellite 1 657 -396 1 761 435 78 0 0 chrUextra 23166765 23166829 -5837827 + (TTCTC)n Simple_repeat Simple_repeat 5 68 0 1 761 2546 0 7 7 chrUextra 23167519 23167829 -5836827 + LSU-rRNA_Dme rRNA rRNA 1479 1788 -2112 1 761 2646 0 0 0 chrUextra 23167873 23168173 -5836483 + LSU-rRNA_Dme rRNA rRNA 1788 2087 -1813 1 761 1713 0 18 14 chrUextra 23168273 23168496 -5836160 + NTS_DM Other Other 17 240 0 1 761 1847 4 17 13 chrUextra 23168496 23168735 -5835921 + NTS_DM Other Other 1 240 0 1 761 1238 19 0 24 chrUextra 23168735 23168901 -5835755 + NTS_DM Other Other 1 162 -78 1 761 2738 193 19 22 chrUextra 23169027 23169680 -5834976 + SAR_DM Satellite Satellite 1 651 -208 1 761 2460 185 19 21 chrUextra 23169797 23170421 -5834235 + SAR_DM Satellite Satellite 496 1118 -354 1 761 297 145 32 0 chrUextra 23170368 23170430 -5834226 - XDMR Unknown Unknown 0 361 298 1 761 276 339 16 11 chrUextra 23170996 23171187 -5833469 - BLASTOPIA_I LTR Gypsy -749 3732 3541 1 761 4967 5 3 0 chrUextra 23171289 23171887 -5832769 - STALKER4_I LTR Gypsy -1269 5261 4662 1 761 581 0 0 0 chrUextra 23171874 23171943 -5832713 - STALKER4_I LTR Gypsy -2910 3620 3552 1 761 1796 35 0 0 chrUextra 23172043 23172270 -5832386 + DMCR1A LINE CR1 1426 1652 -2818 1 761 3531 28 0 5 chrUextra 23172265 23172697 -5831959 + DMCR1A LINE CR1 2027 2456 -2014 1 761 2900 163 9 11 chrUextra 23172797 23173430 -5831226 - SAR_DM Satellite Satellite -515 957 326 1 761 689 0 0 11 chrUextra 23173553 23173642 -5831014 + STALKER4_I LTR Gypsy 5254 5341 -1189 1 761 4649 4 0 0 chrUextra 23173642 23174205 -5830451 + STALKER4_I LTR Gypsy 5687 6249 -281 1 761 3011 55 74 3 chrUextra 23174305 23174959 -5829697 + PROTOP_A DNA P 490 1055 -50 1 761 23 0 0 0 chrUextra 23176571 23176594 -5828062 + AT_rich Low_complexity Low_complexity 1 23 0 1 761 243 245 39 10 chrUextra 23177069 23177172 -5827484 + MDG1_I LTR Gypsy 1748 1853 -4743 1 761 5458 20 0 0 chrUextra 23177321 23177975 -5826681 + DMRT1B LINE R1 1939 2592 -2591 1 761 5505 20 1 0 chrUextra 23178075 23178729 -5825927 + MAX_I LTR Pao 3612 4266 -3648 1 761 284 316 47 47 chrUextra 23179091 23179327 -5825329 + Copia2_I LTR Copia 974 1209 -2953 1 761 2927 173 9 8 chrUextra 23179583 23180231 -5824425 + SAR_DM Satellite Satellite 247 895 -577 1 761 313 141 59 0 chrUextra 23180337 23180422 -5824234 + GA-rich Low_complexity Low_complexity 5 94 0 1 761 1408 28 11 0 chrUextra 23180422 23180599 -5824057 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 761 2762 3 3 0 chrUextra 23181091 23181410 -5823246 + SSU-rRNA_Dme rRNA rRNA 1676 1995 0 1 761 21 89 0 0 chrUextra 23181429 23181485 -5823171 + AT_rich Low_complexity Low_complexity 1 56 0 1 761 444 176 143 0 chrUextra 23181845 23181964 -5822692 - ARS406_DM Unknown Unknown -217 136 1 1 761 1767 189 26 5 chrUextra 23181860 23182497 -5822159 + SAR_DM Satellite Satellite 1 650 -707 1 761 1215 0 23 23 chrUextra 23182599 23182774 -5821882 + NTS_DM Other Other 66 240 0 1 761 1861 0 17 13 chrUextra 23182774 23183013 -5821643 + NTS_DM Other Other 1 240 0 1 761 1839 4 17 13 chrUextra 23183013 23183252 -5821404 + NTS_DM Other Other 1 240 0 1 761 4247 0 2 2 chrUextra 23183353 23183842 -5820814 + SSU-rRNA_Dme rRNA rRNA 1507 1995 0 1 761 21 89 0 0 chrUextra 23183861 23183917 -5820739 + AT_rich Low_complexity Low_complexity 1 56 0 1 761 2459 10 3 0 chrUextra 23184107 23184398 -5820258 + R1_DM LINE R1 5065 5356 0 1 761 3111 8 0 0 chrUextra 23184396 23184761 -5819895 + LSU-rRNA_Dme rRNA rRNA 2640 3004 -896 1 761 460 0 0 0 chrUextra 23184896 23184950 -5819706 + Invader1_I LTR Gypsy 3133 3186 0 1 761 3591 12 2 0 chrUextra 23184950 23185372 -5819284 + Invader1_LTR LTR Gypsy 1 423 0 1 761 4742 29 0 5 chrUextra 23185615 23186209 -5818447 - R1_DM LINE R1 -3438 1918 1328 1 761 402 81 16 16 chrUextra 23186206 23186269 -5818387 - R1_DM LINE R1 -4179 1177 1115 1 761 5462 25 0 0 chrUextra 23186369 23187023 -5817633 - MAX_I LTR Pao -1595 6319 5666 1 761 2737 174 17 12 chrUextra 23187128 23187768 -5816888 - SAR_DM Satellite Satellite -478 994 352 1 761 331 120 0 0 chrUextra 23187910 23187960 -5816696 + Invader1_I LTR Gypsy 3137 3186 0 1 761 2399 109 44 19 chrUextra 23187961 23188373 -5816283 + Invader1_LTR LTR Gypsy 2 423 0 1 761 255 203 108 0 chrUextra 23188445 23188519 -5816137 - HMSBEAGLE_I LTR Gypsy -5951 578 497 1 761 2942 163 33 41 chrUextra 23188631 23189271 -5815385 - Gypsy12_LTR LTR Gypsy -38 2298 1664 1 761 1440 177 120 20 chrUextra 23189385 23189777 -5814879 - Stalker2_I LTR Gypsy -6681 721 291 1 761 28 48 0 0 chrUextra 23189784 23189826 -5814830 + AT_rich Low_complexity Low_complexity 1 42 0 1 761 1132 89 2 19 chrUextra 23189860 23190039 -5814617 - STALKER4_LTR LTR Gypsy -3 399 227 1 761 4482 65 5 6 chrUextra 23190168 23190790 -5813866 + R1_DM LINE R1 1 621 -4735 1 761 1949 200 48 64 chrUextra 23190893 23191546 -5813110 - TAHRE LINE telomeric -2861 7602 6961 1 761 5585 3 0 0 chrUextra 23191650 23192301 -5812355 - DMRT1A LINE R1 -3350 1833 1183 1 761 5160 2 0 38 chrUextra 23192401 23193055 -5811601 - LSU-rRNA_Dme rRNA rRNA -3232 668 40 1 761 201 305 24 12 chrUextra 23193567 23193650 -5811006 + (TCG)n Simple_repeat Simple_repeat 3 86 0 1 761 2956 168 17 9 chrUextra 23193909 23194563 -5810093 - SAR_DM Satellite Satellite -396 1076 418 1 761 290 292 98 24 chrUextra 23194664 23194787 -5809869 + Gypsy_DS LTR Gypsy 3204 3335 -4187 1 761 1394 30 64 0 chrUextra 23194727 23194930 -5809726 + TLD2 Unknown Unknown 1 216 -2 1 761 239 277 92 48 chrUextra 23194755 23195047 -5809609 + DM297_I LTR Gypsy 2668 2972 -3195 1 761 2856 178 8 9 chrUextra 23195418 23196071 -5808585 + SAR_DM Satellite Satellite 267 918 -554 1 761 5439 5 1 3 chrUextra 23196175 23196825 -5807831 - R1_DM LINE R1 -1437 3919 3271 1 761 590 47 0 0 chrUextra 23196925 23197011 -5807645 - R1_DM LINE R1 -4633 723 638 1 761 1190 66 6 0 chrUextra 23197009 23197176 -5807480 - R1_DM LINE R1 -5188 168 1 1 761 888 27 27 0 chrUextra 23197209 23197320 -5807336 - R1_DM LINE R1 0 5356 5243 1 761 2038 15 50 0 chrUextra 23197317 23197579 -5807077 - R1_DM LINE R1 -290 5066 4792 1 761 463 0 0 0 chrUextra 23197679 23197732 -5806924 - NTS_DM Other Other -187 53 1 1 761 1861 0 17 13 chrUextra 23197732 23197971 -5806685 - NTS_DM Other Other 0 240 1 1 761 1861 0 17 13 chrUextra 23197971 23198210 -5806446 - NTS_DM Other Other 0 240 1 1 761 307 25 0 0 chrUextra 23198293 23198333 -5806323 - NTS_DM Other Other -39 201 162 1 761 5152 40 28 0 chrUextra 23198433 23199087 -5805569 + R1_DM LINE R1 1250 1921 -3435 1 761 647 180 12 62 chrUextra 23199280 23199440 -5805216 - HETRP_DM Satellite Satellite -203 1669 1518 1 761 641 185 6 62 chrUextra 23199557 23199718 -5804938 - HETRP_DM Satellite Satellite -203 1669 1518 1 762 5211 21 25 1 chrUextra 23199941 23200595 -5804061 - STALKER4_I LTR Gypsy -1428 5102 4434 1 762 2023 51 166 173 chrUextra 23200695 23201022 -5803634 - ROO_I LTR Pao -7250 1006 642 1 762 372 138 0 0 chrUextra 23201022 23201087 -5803569 + (CTG)n Simple_repeat Simple_repeat 1 65 0 1 762 2023 51 166 173 chrUextra 23201087 23201349 -5803307 - ROO_I LTR Pao -7615 641 422 1 762 5717 0 0 1 chrUextra 23201449 23202103 -5802553 + SSU-rRNA_Dme rRNA rRNA 298 950 -1045 1 762 1620 0 0 0 chrUextra 23202222 23202402 -5802254 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 762 1744 21 17 17 chrUextra 23202969 23203209 -5801447 + NTS_DM Other Other 1 240 0 1 762 1821 8 17 13 chrUextra 23203209 23203448 -5801208 + NTS_DM Other Other 1 240 0 1 762 1339 12 0 0 chrUextra 23203448 23203611 -5801045 + NTS_DM Other Other 1 163 -77 1 762 474 0 65 39 chrUextra 23203711 23203788 -5800868 + NTS_DM Other Other 162 240 0 1 762 1861 0 17 13 chrUextra 23203788 23204027 -5800629 + NTS_DM Other Other 1 240 0 1 762 1847 4 17 13 chrUextra 23204027 23204266 -5800390 + NTS_DM Other Other 1 240 0 1 762 828 0 0 10 chrUextra 23204266 23204365 -5800291 + NTS_DM Other Other 1 98 -142 1 762 2073 165 19 8 chrUextra 23204465 23205101 -5799555 + SAR_DM Satellite Satellite 1 643 -672 1 762 1580 15 0 3 chrUextra 23205973 23206315 -5798341 + (GAGAA)n Simple_repeat Simple_repeat 1 341 0 1 762 2623 181 9 9 chrUextra 23207482 23208111 -5796545 - SAR_DM Satellite Satellite -645 827 199 1 762 622 115 0 0 chrUextra 23208022 23208126 -5796530 + ARS406_DM Unknown Unknown 1 104 -249 1 762 1381 32 21 11 chrUextra 23208337 23208525 -5796131 - ACCORD2_I LTR Gypsy -5845 1367 1178 1 762 255 79 0 0 chrUextra 23208525 23208563 -5796093 + (TTA)n Simple_repeat Simple_repeat 2 39 0 1 762 521 0 0 0 chrUextra 23208563 23208623 -5796033 - ACCORD2_I LTR Gypsy -6072 1140 1081 1 762 2006 0 0 0 chrUextra 23208623 23208855 -5795801 + MICROPIA_LTR LTR Gypsy 1 232 -244 1 762 2917 164 19 14 chrUextra 23208989 23209639 -5795017 + SAR_DM Satellite Satellite 385 1037 -435 1 762 453 45 45 0 chrUextra 23209743 23209810 -5794846 - Stalker2_I LTR Gypsy -5759 1643 1574 1 762 3109 10 0 8 chrUextra 23210009 23210397 -5794259 - Stalker2_I LTR Gypsy -5810 1592 1208 1 762 1620 0 0 0 chrUextra 23210498 23210883 -5793773 + (TTGTG)n Simple_repeat Simple_repeat 1 385 0 1 762 2312 8 0 0 chrUextra 23210883 23211151 -5793505 + DMRT1B LINE R1 3536 3803 -1380 1 762 2825 166 13 8 chrUextra 23211272 23211902 -5792754 + SAR_DM Satellite Satellite 326 958 -514 1 762 5424 15 1 1 chrUextra 23212005 23212659 -5791997 + R1_DM LINE R1 3643 4296 -1060 1 762 5596 1 0 0 chrUextra 23212759 23213413 -5791243 - LSU-rRNA_Dme rRNA rRNA -2769 1131 478 1 762 2339 174 5 9 chrUextra 23213513 23214061 -5790595 + SAR_DM Satellite Satellite 1 651 -447 1 762 774 57 0 0 chrUextra 23214061 23214167 -5790489 - ARS406_DM Unknown Unknown -164 189 84 1 762 2219 95 23 41 chrUextra 23214267 23214921 -5789735 - DMSAT6 Satellite Satellite -39 641 1 1 762 2806 179 11 9 chrUextra 23215021 23215675 -5788981 + SAR_DM Satellite Satellite 284 938 -534 1 762 4838 53 11 0 chrUextra 23215775 23216429 -5788227 + TART LINE telomeric 262 922 -13555 1 762 5023 37 0 0 chrUextra 23216530 23217183 -5787473 - MDG1_I LTR Gypsy -1302 5294 4642 1 762 762 0 0 0 chrUextra 23217283 23217372 -5787284 - NTS_DM Other Other -114 126 38 1 762 840 9 0 35 chrUextra 23217372 23217485 -5787171 - NTS_DM Other Other -107 133 25 1 762 22 56 0 0 chrUextra 23217511 23217547 -5787109 + AT_rich Low_complexity Low_complexity 1 36 0 1 762 255 125 0 0 chrUextra 23217560 23217600 -5787056 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 762 246 150 0 0 chrUextra 23217643 23217683 -5786973 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 762 246 150 0 0 chrUextra 23217735 23217775 -5786881 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 762 246 150 0 0 chrUextra 23217827 23217867 -5786789 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 762 22 56 0 0 chrUextra 23217872 23217908 -5786748 + AT_rich Low_complexity Low_complexity 1 36 0 1 762 5618 1 1 3 chrUextra 23218791 23219445 -5785211 - SSU-rRNA_Dme rRNA rRNA -565 1430 778 1 762 5446 28 0 0 chrUextra 23219545 23220199 -5784457 + DIVER_I LTR Pao 1930 2583 -3060 1 762 702 12 0 0 chrUextra 23220299 23220382 -5784274 + 5S_DM RNA RNA 53 135 0 1 762 1150 7 0 0 chrUextra 23220623 23220758 -5783898 + 5S_DM RNA RNA 1 135 0 1 762 5734 0 0 0 chrUextra 23221053 23221707 -5782949 + DOC LINE Jockey 3491 4144 -581 1 762 2874 48 10 15 chrUextra 23221807 23222209 -5782447 + BATUMI_I LTR Pao 6602 7001 -962 1 762 1886 97 11 11 chrUextra 23222169 23222461 -5782195 - BATUMI_I LTR Pao -1543 6420 6195 1 762 5652 9 1 1 chrUextra 23223315 23223969 -5780687 + G_DM LINE Jockey 1787 2440 -1906 1 762 2795 186 16 12 chrUextra 23224069 23224712 -5779944 + SAR_DM Satellite Satellite 432 1076 -396 1 762 5143 47 20 14 chrUextra 23224822 23225473 -5779183 - DMCR1A LINE CR1 -3201 1269 615 1 762 5746 11 6 0 chrUextra 23225575 23226228 -5778428 - R2_DM LINE R2 -2706 901 245 1 762 2876 186 26 6 chrUextra 23226332 23226977 -5777679 - SAR_DM Satellite Satellite -620 852 195 1 762 2996 186 9 9 chrUextra 23227082 23227734 -5776922 - SAR_DM Satellite Satellite -572 900 249 1 762 3032 178 8 9 chrUextra 23227840 23228487 -5776169 - SAR_DM Satellite Satellite -417 1055 410 1 762 2893 187 9 8 chrUextra 23228599 23229240 -5775416 - SAR_DM Satellite Satellite -417 1055 414 1 762 1985 40 61 0 chrUextra 23229746 23229993 -5774663 + PROTOP DNA P 1 262 -4218 1 762 5907 5 0 0 chrUextra 23230095 23230746 -5773910 - Gypsy6_I LTR Gypsy -3570 3442 2792 1 762 5719 18 0 0 chrUextra 23230846 23231499 -5773157 - R1_DM LINE R1 -1609 3747 3095 1 762 3073 175 8 9 chrUextra 23231599 23232240 -5772416 + SAR_DM Satellite Satellite 417 1056 -416 1 762 2767 196 6 9 chrUextra 23232352 23232999 -5771657 - SAR_DM Satellite Satellite -604 868 224 1 762 3249 161 29 6 chrUextra 23233109 23233758 -5770898 - SAR_DM Satellite Satellite -425 1047 384 1 762 3008 182 12 8 chrUextra 23233858 23234511 -5770145 + SAR_DM Satellite Satellite 278 933 -539 1 762 2556 83 14 20 chrUextra 23234612 23235264 -5769392 + DMSAT6 Satellite Satellite 1 648 -97 1 762 5658 20 0 0 chrUextra 23236117 23236770 -5767886 - R1_DM LINE R1 -2231 3125 2473 1 762 2937 174 24 11 chrUextra 23237623 23238252 -5766404 - SAR_DM Satellite Satellite -641 831 195 1 762 701 112 9 0 chrUextra 23238160 23238276 -5766380 + ARS406_DM Unknown Unknown 1 117 -236 1 762 1736 60 40 0 chrUextra 23238376 23238628 -5766028 - PROTOP_B DNA P -716 437 176 1 762 520 247 17 29 chrUextra 23238620 23238795 -5765861 + QUASIMODO_I LTR Gypsy 5527 5699 -361 1 762 1901 13 56 4 chrUextra 23238796 23239029 -5765627 + IVK_DM LINE I 1 245 -5157 1 762 2527 175 101 11 chrUextra 23239129 23239766 -5764890 - SAR_DM Satellite Satellite -453 1019 326 1 762 3080 161 17 17 chrUextra 23241391 23242041 -5762615 - SAR_DM Satellite Satellite -549 923 274 1 762 3096 168 15 9 chrUextra 23242141 23242794 -5761862 + SAR_DM Satellite Satellite 205 861 -611 1 762 22 56 0 0 chrUextra 23242926 23242962 -5761694 + AT_rich Low_complexity Low_complexity 1 36 0 1 762 3426 48 0 7 chrUextra 23243124 23243547 -5761109 + G2_DM LINE Jockey 1411 1830 -1272 1 762 5093 0 3 73 chrUextra 23243647 23244300 -5760356 + LSU-rRNA_Dme rRNA rRNA 1600 2206 -1694 1 762 3083 174 11 9 chrUextra 23244400 23245051 -5759605 - SAR_DM Satellite Satellite -396 1076 425 1 762 2170 73 7 3 chrUextra 23245157 23245457 -5759199 - R1_DM LINE R1 -5055 301 1 1 762 2751 19 0 3 chrUextra 23245490 23245806 -5758850 - R1_DM LINE R1 0 5356 5042 1 762 486 108 27 0 chrUextra 23245907 23245981 -5758675 - NTS_DM Other Other -161 79 4 1 762 1355 6 0 18 chrUextra 23246091 23246256 -5758400 - NTS_DM Other Other -78 162 1 1 762 1903 0 21 13 chrUextra 23246256 23246494 -5758162 - NTS_DM Other Other 0 240 1 1 762 434 0 62 46 chrUextra 23246494 23246559 -5758097 - NTS_DM Other Other 0 240 175 1 762 2948 53 72 3 chrUextra 23247412 23248065 -5756591 + PROTOP DNA P 292 857 -248 1 762 3038 170 8 8 chrUextra 23248166 23248799 -5755857 - SAR_DM Satellite Satellite -645 827 195 1 762 691 125 0 0 chrUextra 23248706 23248818 -5755838 + ARS406_DM Unknown Unknown 1 112 -241 1 762 3074 161 11 11 chrUextra 23248930 23249563 -5755093 + SAR_DM Satellite Satellite 326 958 -514 1 762 924 0 0 27 chrUextra 23249705 23249817 -5754839 + NTS_DM Other Other 25 133 -107 1 762 1427 10 19 34 chrUextra 23249817 23250023 -5754633 + NTS_DM Other Other 38 240 0 1 762 1835 17 17 17 chrUextra 23250023 23250263 -5754393 + NTS_DM Other Other 1 240 0 1 762 516 16 16 0 chrUextra 23250263 23250324 -5754332 + NTS_DM Other Other 1 62 -178 1 762 1374 21 20 20 chrUextra 23250425 23250620 -5754036 - NTS_DM Other Other -8 232 38 1 762 828 10 0 0 chrUextra 23250620 23250716 -5753940 - NTS_DM Other Other -107 133 38 1 762 907 9 0 27 chrUextra 23250716 23250828 -5753828 - NTS_DM Other Other -107 133 25 1 762 1304 18 0 6 chrUextra 23250880 23251045 -5753611 - NTS_DM Other Other -39 201 38 1 762 235 0 0 0 chrUextra 23251045 23251077 -5753579 - NTS_DM Other Other -107 133 102 1 762 5805 3 1 3 chrUextra 23251177 23251830 -5752826 - LSU-rRNA_Dme rRNA rRNA -2479 1421 770 1 762 5781 0 1 1 chrUextra 23251930 23252583 -5752073 - LSU-rRNA_Dme rRNA rRNA -2705 1195 543 1 762 2914 173 14 12 chrUextra 23252683 23253326 -5751330 + SAR_DM Satellite Satellite 418 1061 -411 1 762 4466 10 6 10 chrUextra 23253436 23254089 -5750567 + LSU-rRNA_Dme rRNA rRNA 1085 1591 -2309 1 762 1966 232 29 20 chrUextra 23254195 23254840 -5749816 - G_DM LINE Jockey -536 1506 862 1 762 830 36 0 9 chrUextra 23254942 23255053 -5749603 - NTS_DM Other Other -93 147 38 1 762 907 9 0 27 chrUextra 23255053 23255165 -5749491 - NTS_DM Other Other -107 133 25 1 762 1304 18 0 6 chrUextra 23255217 23255382 -5749274 - NTS_DM Other Other -39 201 38 1 762 888 18 0 27 chrUextra 23255382 23255494 -5749162 - NTS_DM Other Other -107 133 25 1 762 22 56 0 0 chrUextra 23255520 23255556 -5749100 + AT_rich Low_complexity Low_complexity 1 36 0 1 762 5325 29 1 0 chrUextra 23256450 23257101 -5747555 + MDG1_I LTR Gypsy 4930 5581 -1015 1 762 5598 18 28 0 chrUextra 23257201 23257854 -5746802 + R1_DM LINE R1 1843 2513 -2843 1 762 309 51 0 0 chrUextra 23258447 23258486 -5746170 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 762 4989 67 3 3 chrUextra 23258717 23259360 -5745296 + R1_DM LINE R1 1 643 -4713 1 762 1523 20 19 19 chrUextra 23259463 23259670 -5744986 + NTS_DM Other Other 34 240 0 1 762 1813 21 17 17 chrUextra 23259670 23259910 -5744746 + NTS_DM Other Other 1 240 0 1 762 1731 10 0 0 chrUextra 23259910 23260113 -5744543 + NTS_DM Other Other 1 203 -37 1 762 3216 165 9 8 chrUextra 23260213 23260862 -5743794 + SAR_DM Satellite Satellite 388 1037 -435 1 762 21 95 0 0 chrUextra 23261190 23261253 -5743403 + AT_rich Low_complexity Low_complexity 1 63 0 1 762 2752 0 6 71 chrUextra 23261265 23261619 -5743037 + LSU-rRNA_Dme rRNA rRNA 1 331 -3569 1 762 635 127 17 8 chrUextra 23261719 23261838 -5742818 - ARS406_DM Unknown Unknown -232 121 2 1 762 2809 177 16 13 chrUextra 23261742 23262372 -5742284 + SAR_DM Satellite Satellite 192 823 -649 1 762 23 0 0 0 chrUextra 23262558 23262581 -5742075 + AT_rich Low_complexity Low_complexity 1 23 0 1 762 5860 0 0 1 chrUextra 23263225 23263878 -5740778 + FW_DM LINE Jockey 3891 4542 -150 1 762 519 175 394 61 chrUextra 23263984 23264248 -5740408 + TART LINE telomeric 10140 10491 -3986 1 762 34 24 0 0 chrUextra 23264259 23264300 -5740356 + AT_rich Low_complexity Low_complexity 1 41 0 1 762 2566 3 0 3 chrUextra 23265088 23265384 -5739272 + IDEFIX_I LTR Gypsy 1 295 -5333 1 762 2969 167 12 11 chrUextra 23265495 23266137 -5738519 + SAR_DM Satellite Satellite 326 968 -504 1 762 4274 0 2 0 chrUextra 23266990 23267456 -5737200 + SSU-rRNA_Dme rRNA rRNA 1529 1995 0 1 762 21 89 0 0 chrUextra 23267475 23267531 -5737125 + AT_rich Low_complexity Low_complexity 1 56 0 1 762 902 18 0 0 chrUextra 23267743 23267852 -5736804 + ROO_I LTR Pao 5812 5920 -2336 1 762 4732 6 22 0 chrUextra 23267849 23268396 -5736260 + ROO_I LTR Pao 7472 8030 -226 1 762 2747 161 14 16 chrUextra 23268496 23269149 -5735507 + BATUMI_I LTR Pao 4210 4860 -3054 1 762 974 55 6 21 chrUextra 23269249 23269902 -5734754 - RSP Satellite Satellite -35 643 1 1 762 2968 169 19 11 chrUextra 23270005 23270655 -5734001 - SAR_DM Satellite Satellite -581 891 237 1 762 4523 57 1 57 chrUextra 23270755 23271408 -5733248 + BATUMI_I LTR Pao 2477 3093 -4870 1 762 4146 38 14 0 chrUextra 23271508 23272014 -5732642 - PROTOP DNA P -3967 513 1 1 762 2871 195 8 9 chrUextra 23272262 23272914 -5731742 - SAR_DM Satellite Satellite -610 862 212 1 762 3287 101 124 41 chrUextra 23273014 23273667 -5730989 + BATUMI_I LTR Pao 798 1504 -6459 1 762 5351 27 11 0 chrUextra 23273768 23274400 -5730256 + R1_DM LINE R1 4428 5066 -290 1 762 2743 19 1 24 chrUextra 23274520 23275173 -5729483 + HETRP_DM Satellite Satellite 1 638 -1284 1 762 5335 3 5 5 chrUextra 23275273 23275886 -5728770 + LSU-rRNA_Dme rRNA rRNA 1176 1788 -2112 1 762 5766 14 1 0 chrUextra 23276026 23276679 -5727977 + Gypsy4_I LTR Gypsy 601 1254 -5034 1 762 3358 33 0 0 chrUextra 23276781 23277173 -5727483 + DIVER_I LTR Pao 5252 5643 0 1 762 1261 107 0 97 chrUextra 23277173 23277421 -5727235 + DIVER_LTR LTR Pao 1 224 0 1 762 2702 192 64 22 chrUextra 23277532 23278185 -5726471 - SAR_DM Satellite Satellite -673 680 1 1 762 2493 109 14 29 chrUextra 23278285 23278936 -5725720 + DMSAT6 Satellite Satellite 1 640 -69 1 762 5534 14 0 0 chrUextra 23279038 23279691 -5724965 + Invader2_I LTR Gypsy 3276 3928 -664 1 762 4564 116 1 0 chrUextra 23279791 23280444 -5724212 + HMSBEAGLE_I LTR Gypsy 4981 5634 -895 1 762 1613 171 100 52 chrUextra 23280544 23280963 -5723693 - TAHRE LINE telomeric -2981 7482 7044 1 762 1681 68 13 0 chrUextra 23280962 23281197 -5723459 - TAHRE LINE telomeric -12 10451 10214 1 762 2427 247 5 6 chrUextra 23281310 23281950 -5722706 - DM412 LTR Gypsy -550 6347 5709 1 762 472 229 206 27 chrUextra 23282822 23283114 -5721542 + MAX_I LTR Pao 820 1163 -6751 1 762 868 104 218 19 chrUextra 23283115 23283331 -5721325 + MAX_I LTR Pao 939 1197 -6717 1 762 5887 1 3 0 chrUextra 23283558 23284209 -5720447 - LSU-rRNA_Dme rRNA rRNA -654 3246 2594 1 762 3458 197 0 1 chrUextra 23284312 23284962 -5719694 + ROVER-I_DM LTR Gypsy 2324 2972 -3612 1 762 5929 1 0 1 chrUextra 23285062 23285715 -5718941 + LSU-rRNA_Dme rRNA rRNA 2556 3207 -693 1 762 2798 47 3 0 chrUextra 23285815 23286179 -5718477 + I_DM LINE I 822 1186 -5045 1 762 630 158 350 46 chrUextra 23286175 23286415 -5718241 + ROVER-LTR_DM LTR Gypsy 55 367 0 1 762 3831 20 0 0 chrUextra 23286568 23287013 -5717643 + FW_DM LINE Jockey 4235 4679 -13 1 762 793 269 9 9 chrUextra 23287007 23287221 -5717435 - GTWIN_I LTR Gypsy -2186 4235 4022 1 762 4313 59 2 21 chrUextra 23287321 23287890 -5716766 + CIRCE LINE Composite 2278 2835 -3521 1 762 632 61 0 0 chrUextra 23287892 23287974 -5716682 + CIRCE LINE Composite 2961 3042 -3314 1 762 1363 49 0 0 chrUextra 23288827 23288990 -5715666 - R1_DM LINE R1 -3792 1564 1402 1 762 3986 54 4 2 chrUextra 23288981 23289480 -5715176 - R1_DM LINE R1 -3897 1459 960 1 762 2591 163 24 18 chrUextra 23290333 23290938 -5713718 - TART LINE telomeric -5046 9431 8928 1 762 40 21 0 0 chrUextra 23291094 23291141 -5713515 + AT_rich Low_complexity Low_complexity 1 47 0 1 762 799 21 0 0 chrUextra 23291644 23291737 -5712919 + Gypsy4_I LTR Gypsy 374 466 -5822 1 762 5913 0 1 3 chrUextra 23291839 23292492 -5712164 + LSU-rRNA_Dme rRNA rRNA 3137 3788 -112 1 762 681 30 0 10 chrUextra 23293345 23293447 -5711209 + NTS_DM Other Other 101 201 -39 1 762 907 9 0 27 chrUextra 23293499 23293611 -5711045 + NTS_DM Other Other 25 133 -107 1 762 1304 18 0 6 chrUextra 23293611 23293776 -5710880 + NTS_DM Other Other 38 201 -39 1 762 886 18 0 27 chrUextra 23293828 23293940 -5710716 + NTS_DM Other Other 25 133 -107 1 762 524 0 0 0 chrUextra 23293940 23293998 -5710658 + NTS_DM Other Other 38 95 -145 1 762 1578 21 0 0 chrUextra 23294106 23294392 -5710264 + (TTCTC)n Simple_repeat Simple_repeat 1 286 0 1 762 549 0 0 0 chrUextra 23294416 23294477 -5710179 + (GAGAA)n Simple_repeat Simple_repeat 1 61 0 1 762 4586 2 0 0 chrUextra 23294851 23295384 -5709272 + STALKER4_I LTR Gypsy 3142 3674 -2856 1 762 964 17 0 25 chrUextra 23295384 23295504 -5709152 - BATUMI_I LTR Pao -679 7284 7168 1 762 2225 11 0 11 chrUextra 23295604 23295873 -5708783 + DOC5_DM LINE Jockey 4386 4651 -31 1 762 242 0 61 0 chrUextra 23295875 23295908 -5708748 + (TATAA)n Simple_repeat Simple_repeat 2 36 0 1 762 5777 8 3 3 chrUextra 23296357 23297010 -5707646 - TART_B1 LINE telomeric -1964 8690 8038 1 762 1183 184 11 14 chrUextra 23297113 23297763 -5706893 + SAR_DM Satellite Satellite 1 648 -645 1 762 5670 28 0 0 chrUextra 23297863 23298516 -5706140 + DIVER_I LTR Pao 1151 1803 -3840 1 762 514 119 36 0 chrUextra 23298852 23298936 -5705720 - NTS_DM Other Other -150 90 4 1 762 1325 6 0 24 chrUextra 23299046 23299212 -5705444 - NTS_DM Other Other -78 162 1 1 762 352 0 70 53 chrUextra 23299212 23299269 -5705387 - NTS_DM Other Other 0 240 183 1 762 334 221 0 11 chrUextra 23299372 23299459 -5705197 + DMLTR5 LTR Gypsy 181 266 0 1 762 372 49 65 16 chrUextra 23299458 23299520 -5705136 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 1 762 277 106 0 21 chrUextra 23299542 23299590 -5705066 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 762 5729 0 0 1 chrUextra 23300122 23300775 -5703881 + ROO_I LTR Pao 1588 2239 -6017 1 762 2975 178 12 11 chrUextra 23300875 23301528 -5703128 + SAR_DM Satellite Satellite 304 957 -515 1 762 2838 196 17 24 chrUextra 23301629 23302281 -5702375 - SAR_DM Satellite Satellite -614 647 1 1 762 3139 180 8 6 chrUextra 23302381 23303034 -5701622 - SAR_DM Satellite Satellite -550 922 269 1 762 5439 5 8 0 chrUextra 23303171 23303787 -5700869 + QUASIMODO_LTR LTR Gypsy 1 621 -37 1 762 2611 193 14 17 chrUextra 23303892 23304539 -5700117 + SAR_DM Satellite Satellite 321 965 -507 1 762 3057 262 48 29 chrUextra 23304641 23304675 -5699981 + SAR_DM Satellite Satellite 1 37 -1932 1 762 890 60 0 0 chrUextra 23304675 23304792 -5699864 - ARS406_DM Unknown Unknown -164 189 73 1 762 3057 262 48 29 chrUextra 23304792 23306045 -5698611 + SAR_DM Satellite Satellite 38 1430 -539 1 762 3062 181 6 9 chrUextra 23306146 23306799 -5697857 - SAR_DM Satellite Satellite -610 862 212 1 762 974 287 51 30 chrUextra 23306901 23307494 -5697162 + SAR_DM Satellite Satellite 228 832 -640 1 762 385 264 16 22 chrUextra 23307348 23307530 -5697126 - XDMR_DM Unknown Unknown -1 359 179 1 762 5734 1 0 1 chrUextra 23307652 23308305 -5696351 + LSU-rRNA_Dme rRNA rRNA 459 1110 -2790 1 762 1336 32 0 0 chrUextra 23308405 23308562 -5696094 - IDEFIX_I LTR Gypsy -4199 1429 1273 1 762 3990 39 25 0 chrUextra 23308549 23309058 -5695598 - IDEFIX_I LTR Gypsy -4791 837 316 1 762 2808 175 11 25 chrUextra 23309158 23309802 -5694854 + SAR_DM Satellite Satellite 484 1118 -354 1 762 293 172 16 0 chrUextra 23309747 23309811 -5694845 - XDMR Unknown Unknown 0 361 297 1 762 5427 32 0 0 chrUextra 23309911 23310564 -5694092 + ROO_I LTR Pao 1866 2518 -5738 1 762 1304 18 0 6 chrUextra 23310698 23310863 -5693793 - NTS_DM Other Other -39 201 38 1 762 907 9 0 27 chrUextra 23310863 23310975 -5693681 - NTS_DM Other Other -107 133 25 1 762 1274 18 0 12 chrUextra 23311027 23311193 -5693463 - NTS_DM Other Other -39 201 38 1 762 899 28 0 0 chrUextra 23311193 23311301 -5693355 - NTS_DM Other Other -107 133 26 1 762 277 106 0 21 chrUextra 23311439 23311487 -5693169 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 762 372 49 65 16 chrUextra 23311509 23311571 -5693085 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 762 939 173 102 15 chrUextra 23311570 23311775 -5692881 - DMLTR5 LTR Gypsy 0 266 44 1 762 5856 0 1 5 chrUextra 23312170 23312823 -5691833 + SSU-rRNA_Dme rRNA rRNA 1030 1680 -315 1 762 4560 122 0 0 chrUextra 23312923 23313576 -5691080 - HMSBEAGLE_I LTR Gypsy -1523 5006 4354 1 762 557 0 0 0 chrUextra 23313676 23313738 -5690918 + ROVER-I_DM LTR Gypsy 6523 6584 0 1 762 501 68 0 39 chrUextra 23313737 23313814 -5690842 + ROVER-LTR_DM LTR Gypsy 1 74 -293 1 762 1362 58 5 50 chrUextra 23313945 23314145 -5690511 + ROVER-LTR_DM LTR Gypsy 177 367 0 1 762 1654 5 0 0 chrUextra 23314145 23314329 -5690327 - STALKER4_LTR LTR Gypsy -145 257 74 1 762 603 204 75 0 chrUextra 23314553 23314700 -5689956 + HETRP_DM Satellite Satellite 1518 1675 -197 1 762 770 187 19 19 chrUextra 23314840 23314998 -5689658 + HETRP_DM Satellite Satellite 1518 1675 -197 1 762 411 132 13 13 chrUextra 23315005 23315082 -5689574 - HOBO DNA hAT 0 3016 2940 1 762 5156 0 99 0 chrUextra 23315182 23315835 -5688821 - ROO_I LTR Pao -7112 1144 427 1 762 1763 5 13 22 chrUextra 23315938 23316164 -5688492 - NTS_DM Other Other -16 224 1 1 762 1813 21 17 17 chrUextra 23316164 23316404 -5688252 - NTS_DM Other Other 0 240 1 1 762 1290 17 22 22 chrUextra 23316404 23316588 -5688068 - NTS_DM Other Other 0 240 57 1 762 1924 88 22 60 chrUextra 23316711 23317025 -5687631 - Gypsy6A_LTR LTR Gypsy -118 302 1 1 762 940 326 25 3 chrUextra 23317027 23317341 -5687315 - Gypsy6_I LTR Gypsy 0 7012 6692 1 762 3260 157 14 9 chrUextra 23317443 23318092 -5686564 + SAR_DM Satellite Satellite 282 933 -539 1 762 3069 175 9 9 chrUextra 23318194 23318847 -5685809 + SAR_DM Satellite Satellite 422 1074 -398 1 762 3159 167 11 9 chrUextra 23318947 23319594 -5685062 - SAR_DM Satellite Satellite -426 1046 399 1 762 5769 15 0 0 chrUextra 23319700 23320353 -5684303 - R1_DM LINE R1 -789 4567 3915 1 762 4988 16 0 0 chrUextra 23320453 23321015 -5683641 - DMRT1B LINE R1 -4621 562 1 1 762 3105 165 12 9 chrUextra 23321206 23321859 -5682797 + SAR_DM Satellite Satellite 388 1042 -430 1 762 4519 30 18 32 chrUextra 23321959 23322612 -5682044 - BATUMI_I LTR Pao -7219 744 101 1 762 1033 181 32 25 chrUextra 23322712 23323364 -5681292 - SAR_DM Satellite Satellite -723 657 1 1 762 5899 3 1 0 chrUextra 23323465 23324118 -5680538 + FW_DM LINE Jockey 3354 4007 -685 1 762 2304 196 88 25 chrUextra 23324223 23324871 -5679785 - SAR_DM Satellite Satellite -216 1256 568 1 762 1390 171 21 65 chrUextra 23325746 23326071 -5678585 + HETA LINE telomeric 5437 5747 -334 1 762 1576 109 104 16 chrUextra 23326059 23326377 -5678279 + TART LINE telomeric 9296 9641 -4836 1 762 1292 12 0 12 chrUextra 23326516 23326682 -5677974 - NTS_DM Other Other -39 201 38 1 762 907 9 0 27 chrUextra 23326682 23326794 -5677862 - NTS_DM Other Other -107 133 25 1 762 1304 18 0 6 chrUextra 23326846 23327011 -5677645 - NTS_DM Other Other -39 201 38 1 762 877 9 0 35 chrUextra 23327011 23327124 -5677532 - NTS_DM Other Other -107 133 25 1 762 2045 167 13 6 chrUextra 23327230 23327883 -5676773 + SAR_DM Satellite Satellite 1 657 -677 1 762 271 270 14 0 chrUextra 23327986 23328060 -5676596 - DIVER2_I LTR Pao -3626 521 447 1 762 5813 9 0 0 chrUextra 23328736 23329389 -5675267 - R1_DM LINE R1 -1896 3460 2808 1 762 643 0 0 0 chrUextra 23329489 23329566 -5675090 + NTS_DM Other Other 57 133 -107 1 762 1274 18 0 12 chrUextra 23329566 23329732 -5674924 + NTS_DM Other Other 38 201 -39 1 762 907 9 0 27 chrUextra 23329784 23329896 -5674760 + NTS_DM Other Other 25 133 -107 1 762 1503 15 20 20 chrUextra 23329896 23330099 -5674557 + NTS_DM Other Other 38 240 0 1 762 375 23 0 0 chrUextra 23330099 23330142 -5674514 + NTS_DM Other Other 1 43 -197 1 95 5590 2 2 0 chrUextra 23330242 23330860 -5673796 - LSU-rRNA_Dme rRNA rRNA -1494 2406 1788 1 763 989 68 6 18 chrUextra 23330996 23331648 -5673008 - RSP Satellite Satellite -45 644 1 1 763 3356 0 8 5 chrUextra 23331748 23332136 -5672520 + LSU-rRNA_Dme rRNA rRNA 1400 1788 -2112 1 763 2030 0 0 0 chrUextra 23332180 23332401 -5672255 + LSU-rRNA_Dme rRNA rRNA 1788 2008 -1892 1 763 441 0 0 0 chrUextra 23333105 23333154 -5671502 + (TTCTC)n Simple_repeat Simple_repeat 2 50 0 1 763 2562 186 9 23 chrUextra 23334007 23334658 -5669998 + SAR_DM Satellite Satellite 472 1113 -359 1 763 1607 10 0 30 chrUextra 23334760 23334959 -5669697 - CIRCE LINE Composite -4276 2080 1888 1 763 470 296 45 45 chrUextra 23334761 23335026 -5669630 - Gypsy12_I LTR Gypsy -1447 4099 3835 1 763 3036 16 0 29 chrUextra 23335035 23335413 -5669243 - CIRCE LINE Composite -4474 1882 1516 1 763 3350 26 7 0 chrUextra 23335513 23335930 -5668726 - R1_DM LINE R1 -343 5013 4594 1 763 5243 17 1 6 chrUextra 23336266 23336919 -5667737 + STALKER4_I LTR Gypsy 4262 4911 -1619 1 763 1719 78 85 0 chrUextra 23337019 23337277 -5667379 - MDG1_LTR LTR Gypsy -69 373 94 1 763 372 88 0 0 chrUextra 23337279 23337336 -5667320 + (TTA)n Simple_repeat Simple_repeat 3 59 0 1 763 849 86 56 21 chrUextra 23337364 23337507 -5667149 + DM176_I LTR Gypsy 2360 2507 -3913 1 763 969 127 25 0 chrUextra 23337514 23337672 -5666984 + DM176_I LTR Gypsy 2641 2802 -3618 1 763 3869 19 0 0 chrUextra 23337772 23338234 -5666422 + DOC2_DM LINE Jockey 4029 4490 -303 1 763 641 0 0 40 chrUextra 23338234 23338333 -5666323 + DOC2_DM LINE Jockey 4698 4792 -1 1 763 857 18 0 27 chrUextra 23338527 23338639 -5666017 + NTS_DM Other Other 25 133 -107 1 763 1408 20 20 20 chrUextra 23338639 23338842 -5665814 + NTS_DM Other Other 38 240 0 1 763 1759 17 17 17 chrUextra 23338842 23339082 -5665574 + NTS_DM Other Other 1 240 0 1 763 800 21 0 0 chrUextra 23339082 23339177 -5665479 + NTS_DM Other Other 1 95 -145 1 763 4514 48 8 0 chrUextra 23339277 23339887 -5664769 - MDG1_I LTR Gypsy -4851 1745 1131 1 763 566 211 29 95 chrUextra 23340787 23340997 -5663659 - TAHRE LINE telomeric -3029 7434 7239 1 763 2318 100 21 34 chrUextra 23340997 23341433 -5663223 - TART LINE telomeric -4460 10017 9588 1 763 353 107 0 0 chrUextra 23341533 23341589 -5663067 + ARS406_DM Unknown Unknown 78 133 -220 1 763 2070 206 34 10 chrUextra 23341588 23342183 -5662473 - SAR_DM Satellite Satellite -668 804 196 1 763 3369 273 37 18 chrUextra 23342288 23343660 -5660996 - SAR_DM Satellite Satellite -242 1398 1 1 763 768 98 0 0 chrUextra 23343567 23343689 -5660967 + ARS406_DM Unknown Unknown 1 122 -231 1 763 3372 0 3 0 chrUextra 23343789 23344174 -5660482 + SSU-rRNA_Dme rRNA rRNA 1610 1995 0 1 763 3988 84 2 3 chrUextra 23344541 23345172 -5659484 + BATUMI_I LTR Pao 5924 6796 -1118 1 763 1007 39 0 8 chrUextra 23345065 23345193 -5659463 - BATUMI_I LTR Pao -962 7001 6875 1 763 2904 81 0 2 chrUextra 23345293 23345689 -5658967 + Gypsy12_I LTR Gypsy 5152 5546 0 1 763 1214 175 19 23 chrUextra 23345688 23345945 -5658711 + Gypsy12_LTR LTR Gypsy 1 256 -2080 1 763 2788 187 8 6 chrUextra 23346050 23346697 -5657959 - SAR_DM Satellite Satellite -569 903 256 1 763 507 306 75 44 chrUextra 23346818 23347406 -5657250 - MDG1_I LTR Gypsy -3817 2779 2174 1 763 1630 163 9 8 chrUextra 23347552 23348201 -5656455 + SAR_DM Satellite Satellite 1 649 -755 1 763 2797 194 15 19 chrUextra 23348305 23348946 -5655710 - SAR_DM Satellite Satellite -620 638 1 1 763 2507 133 68 42 chrUextra 23349053 23349705 -5654951 + STALKER4_I LTR Gypsy 456 1180 -5350 1 763 870 9 0 27 chrUextra 23349812 23349924 -5654732 + NTS_DM Other Other 25 133 -107 1 763 1252 18 0 6 chrUextra 23349924 23350089 -5654567 + NTS_DM Other Other 38 201 -39 1 763 870 9 0 27 chrUextra 23350141 23350253 -5654403 + NTS_DM Other Other 25 133 -107 1 763 1222 18 0 12 chrUextra 23350253 23350419 -5654237 + NTS_DM Other Other 38 201 -39 1 763 4206 35 1 51 chrUextra 23350557 23351209 -5653447 - DM176_I LTR Gypsy -5535 885 266 1 763 34 24 0 0 chrUextra 23352152 23352193 -5652463 + AT_rich Low_complexity Low_complexity 1 41 0 1 763 1181 181 249 46 chrUextra 23352206 23352709 -5651947 - TART LINE telomeric -3988 10489 9885 1 763 1559 25 0 3 chrUextra 23352814 23353140 -5651516 + (TTCTC)n Simple_repeat Simple_repeat 1 324 0 1 763 1197 73 0 4 chrUextra 23353153 23353438 -5651218 + (ATAAG)n Simple_repeat Simple_repeat 1 283 0 1 763 5492 9 0 1 chrUextra 23353565 23354217 -5650439 - R1_DM LINE R1 -104 5252 4602 1 763 822 86 0 0 chrUextra 23354317 23354433 -5650223 + (TATAA)n Simple_repeat Simple_repeat 5 120 0 1 763 1356 62 0 0 chrUextra 23354436 23354615 -5650041 + (CAATA)n Simple_repeat Simple_repeat 2 180 0 1 763 1620 14 0 3 chrUextra 23354615 23354969 -5649687 + (TATAA)n Simple_repeat Simple_repeat 1 353 0 1 763 5333 20 1 1 chrUextra 23355821 23356473 -5648183 + R1_DM LINE R1 3483 4134 -1222 1 763 232 223 19 46 chrUextra 23356596 23356704 -5647952 - Gypsy12A_LTR LTR Gypsy -595 1685 1581 1 763 1221 176 88 24 chrUextra 23356762 23357093 -5647563 - Gypsy12_LTR LTR Gypsy -827 1509 1158 1 763 4960 52 6 1 chrUextra 23357325 23357977 -5646679 + R1_DM LINE R1 930 1584 -3772 1 763 3043 0 0 0 chrUextra 23358077 23358422 -5646234 + ROO_LTR LTR Pao 84 428 0 1 763 451 17 0 91 chrUextra 23358422 23358484 -5646172 - CIRCE LINE Composite -4413 1943 1888 1 763 282 287 30 30 chrUextra 23358484 23358551 -5646105 - Gypsy12_I LTR Gypsy -1579 3967 3835 1 763 1353 24 6 0 chrUextra 23358560 23358729 -5645927 - CIRCE LINE Composite -4474 1882 1713 1 763 2980 170 9 6 chrUextra 23358829 23359481 -5645175 - SAR_DM Satellite Satellite -569 903 250 1 763 5604 9 0 0 chrUextra 23359581 23360233 -5644423 + SSU-rRNA_Dme rRNA rRNA 521 1172 -823 1 763 5487 17 0 0 chrUextra 23360333 23360985 -5643671 + R1_DM LINE R1 4007 4658 -698 1 763 5333 25 0 0 chrUextra 23361085 23361737 -5642919 - R1_DM LINE R1 -2239 3117 2466 1 763 279 125 233 0 chrUextra 23361842 23362082 -5642574 + (CTAAA)n Simple_repeat Simple_repeat 1 295 0 1 763 248 41 82 0 chrUextra 23362589 23362638 -5642018 - SAR_DM Satellite Satellite -684 788 736 1 763 2030 35 3 31 chrUextra 23362633 23362924 -5641732 + BATUMI_I LTR Pao 7002 7284 -679 1 763 1650 101 108 25 chrUextra 23362924 23363240 -5641416 + BATUMI_I LTR Pao 1 342 -7621 1 763 5356 31 1 0 chrUextra 23363341 23363993 -5640663 - DMCR1A LINE CR1 -3255 1215 563 1 763 1150 32 103 0 chrUextra 23364588 23364744 -5639912 + PROTOP_B DNA P 1 172 -981 1 763 1655 10 0 0 chrUextra 23364845 23365039 -5639617 - R1_DM LINE R1 -2827 2529 2336 1 763 3933 9 0 0 chrUextra 23365039 23365497 -5639159 + R1_DM LINE R1 4212 4669 -687 1 763 305 279 107 89 chrUextra 23365845 23366125 -5638531 + Invader1_LTR LTR Gypsy 84 368 -55 1 763 5153 22 1 14 chrUextra 23367853 23368505 -5636151 + ROO_I LTR Pao 1836 2479 -5777 1 763 2820 180 11 6 chrUextra 23368608 23369251 -5635405 - SAR_DM Satellite Satellite -581 891 246 1 763 1989 285 9 9 chrUextra 23369365 23370009 -5634647 + Gypsy_I LTR Gypsy 2375 3018 -3489 1 763 946 68 6 18 chrUextra 23370112 23370759 -5633897 + RSP Satellite Satellite 1 639 0 1 763 2901 174 8 9 chrUextra 23370861 23371506 -5633150 + SAR_DM Satellite Satellite 404 1047 -425 1 763 5158 23 21 6 chrUextra 23371613 23372265 -5632391 - FW_DM LINE Jockey -93 4599 3938 1 763 5058 3 0 40 chrUextra 23372365 23373017 -5631639 - LSU-rRNA_Dme rRNA rRNA -3177 723 98 1 763 5628 0 0 0 chrUextra 23373117 23373769 -5630887 + DOC LINE Jockey 1012 1663 -3062 1 763 3300 100 49 31 chrUextra 23373870 23374521 -5630135 + STALKER4_I LTR Gypsy 643 1305 -5225 1 763 1945 13 0 0 chrUextra 23374621 23374849 -5629807 + R1_DM LINE R1 5129 5356 0 1 763 2817 62 5 5 chrUextra 23374882 23375273 -5629383 + R1_DM LINE R1 1 391 -4965 1 763 5314 26 0 0 chrUextra 23375373 23376025 -5628631 - R1_DM LINE R1 -2571 2785 2134 1 763 2836 169 39 8 chrUextra 23376137 23376777 -5627879 + SAR_DM Satellite Satellite 369 1028 -444 1 763 5288 34 0 0 chrUextra 23376881 23377524 -5627132 + BATUMI_I LTR Pao 5077 5719 -2244 1 763 1237 16 27 21 chrUextra 23377631 23377817 -5626839 + NTS_DM Other Other 54 240 0 1 763 1756 17 17 17 chrUextra 23377817 23378057 -5626599 + NTS_DM Other Other 1 240 0 1 763 1128 8 0 0 chrUextra 23378057 23378190 -5626466 + NTS_DM Other Other 1 133 -107 1 763 751 0 11 0 chrUextra 23378190 23378281 -5626375 + NTS_DM Other Other 38 129 -111 1 763 401 212 20 0 chrUextra 23378381 23378480 -5626176 + Gypsy12_LTR LTR Gypsy 312 412 -1924 1 763 292 214 0 0 chrUextra 23378542 23378598 -5626058 + Gypsy12_LTR LTR Gypsy 409 464 -1816 1 763 420 268 37 120 chrUextra 23378707 23379033 -5625623 + Gypsy12_LTR LTR Gypsy 679 977 -1359 1 763 5689 0 0 1 chrUextra 23379133 23379785 -5624871 + SSU-rRNA_Dme rRNA rRNA 323 973 -1022 1 763 5533 5 1 3 chrUextra 23379885 23380537 -5624119 - LSU-rRNA_Dme rRNA rRNA -2467 1433 783 1 763 5304 29 0 1 chrUextra 23380637 23381289 -5623367 + R1_DM LINE R1 1281 1931 -3425 1 763 2634 183 10 10 chrUextra 23381389 23382014 -5622642 + SAR_DM Satellite Satellite 452 1076 -396 1 763 3032 164 11 9 chrUextra 23382141 23382793 -5621863 + SAR_DM Satellite Satellite 379 1031 -441 1 763 2658 181 11 8 chrUextra 23382896 23383527 -5621129 - SAR_DM Satellite Satellite -514 958 326 1 763 5254 5 5 0 chrUextra 23383645 23384297 -5620359 + STALKER4_I LTR Gypsy 5729 6383 -147 1 763 5592 0 0 1 chrUextra 23384397 23385049 -5619607 + R1_DM LINE R1 1584 2234 -3122 1 763 2486 165 15 23 chrUextra 23385149 23385728 -5618928 - SAR_DM Satellite Satellite -1073 574 1 1 763 4751 0 2 2 chrUextra 23385901 23386448 -5618208 + SSU-rRNA_Dme rRNA rRNA 1449 1995 0 1 763 21 89 0 0 chrUextra 23386467 23386523 -5618133 + AT_rich Low_complexity Low_complexity 1 56 0 1 763 4693 28 3 51 chrUextra 23386653 23387305 -5617351 - BATUMI_I LTR Pao -5247 2716 2096 1 763 5369 5 18 11 chrUextra 23387405 23388056 -5616600 - DM176_I LTR Gypsy -3295 3125 2470 1 763 2833 174 13 14 chrUextra 23388183 23388803 -5615853 - SAR_DM Satellite Satellite -396 1076 458 1 763 2533 93 20 12 chrUextra 23388909 23389561 -5615095 + DMSAT6 Satellite Satellite 1 656 -37 1 763 27 29 0 0 chrUextra 23389986 23390020 -5614636 + AT_rich Low_complexity Low_complexity 1 34 0 1 763 265 91 0 0 chrUextra 23390259 23390292 -5614364 + Baggins1 LINE LOA 4727 4759 -694 1 763 4845 61 6 11 chrUextra 23390429 23391060 -5613596 + R1_DM LINE R1 1 628 -4728 1 763 685 0 0 0 chrUextra 23391165 23391239 -5613417 - NTS_DM Other Other -129 111 38 1 763 898 9 9 27 chrUextra 23391239 23391350 -5613306 - NTS_DM Other Other -107 133 25 1 763 22 56 0 0 chrUextra 23391377 23391413 -5613243 + AT_rich Low_complexity Low_complexity 1 36 0 1 763 278 176 0 19 chrUextra 23391426 23391478 -5613178 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 763 268 196 0 19 chrUextra 23391509 23391561 -5613095 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 763 268 196 0 19 chrUextra 23391601 23391653 -5613003 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 763 268 196 0 19 chrUextra 23391693 23391745 -5612911 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 763 433 165 13 0 chrUextra 23391931 23392010 -5612646 - ROVER-I_DM LTR Gypsy -6504 80 1 1 763 1899 88 68 66 chrUextra 23392010 23392376 -5612280 - ROVER-LTR_DM LTR Gypsy 0 367 1 1 763 803 175 98 21 chrUextra 23392376 23392569 -5612087 - ROVER-I_DM LTR Gypsy 0 6584 6377 1 763 5989 0 0 3 chrUextra 23392669 23393321 -5611335 + DOC LINE Jockey 3166 3815 -910 1 763 5781 21 0 0 chrUextra 23393421 23394073 -5610583 - R1_DM LINE R1 -2741 2615 1964 1 763 2900 187 12 14 chrUextra 23394184 23394825 -5609831 + SAR_DM Satellite Satellite 278 917 -555 1 763 2034 45 5 6 chrUextra 23394925 23395345 -5609311 - ACCORD2_I LTR Gypsy -6959 253 1 1 763 1848 9 9 18 chrUextra 23395345 23395562 -5609094 - ACCORD2_LTR LTR Gypsy 0 215 1 1 763 3057 188 9 14 chrUextra 23395677 23396329 -5608327 - SAR_DM Satellite Satellite -557 915 267 1 763 3241 171 6 12 chrUextra 23396439 23397080 -5607576 - SAR_DM Satellite Satellite -411 1061 425 1 763 3231 165 12 11 chrUextra 23397946 23398585 -5606071 + SAR_DM Satellite Satellite 369 1008 -464 1 763 4539 74 40 6 chrUextra 23398685 23399337 -5605319 + TART LINE telomeric 436 1109 -13368 1 763 5777 19 0 3 chrUextra 23399437 23400089 -5604567 - ROO_I LTR Pao -574 7682 7033 1 763 3190 172 9 9 chrUextra 23400189 23400828 -5603828 + SAR_DM Satellite Satellite 438 1076 -396 1 763 5653 20 1 3 chrUextra 23400941 23401593 -5603063 - DMRT1B LINE R1 -1642 3541 2891 1 763 4463 85 100 0 chrUextra 23401695 23402345 -5602311 + TART_B1 LINE telomeric 2414 3128 -7526 1 763 5502 21 11 1 chrUextra 23402445 23403097 -5601559 + NINJA_I LTR Pao 481 1138 -4873 1 763 5786 12 0 5 chrUextra 23403197 23403849 -5600807 - BS LINE Jockey -3378 1748 1100 1 763 3282 173 8 8 chrUextra 23404701 23405353 -5599303 + SAR_DM Satellite Satellite 379 1030 -442 1 763 1124 96 60 0 chrUextra 23405453 23405620 -5599036 + IDEFIX_I LTR Gypsy 4894 5070 -558 1 763 3889 28 2 4 chrUextra 23405619 23406083 -5598573 + IDEFIX_LTR LTR Gypsy 132 594 0 1 763 1724 170 8 6 chrUextra 23406206 23406854 -5597802 - SAR_DM Satellite Satellite -645 649 1 1 763 3158 168 37 12 chrUextra 23406961 23407608 -5597048 + SAR_DM Satellite Satellite 399 1061 -411 1 763 1587 15 0 22 chrUextra 23407709 23408064 -5596592 + (GAGAA)n Simple_repeat Simple_repeat 1 347 0 1 763 1465 62 36 0 chrUextra 23408461 23408654 -5596002 - MDG1_I LTR Gypsy -996 5600 5401 1 763 3421 55 26 4 chrUextra 23408658 23409113 -5595543 - DM297_I LTR Gypsy -1816 4351 3887 1 763 5595 31 0 0 chrUextra 23409213 23409865 -5594791 + MDG1_I LTR Gypsy 1794 2445 -4151 1 763 5133 65 0 1 chrUextra 23409965 23410617 -5594039 - STALKER4_I LTR Gypsy -672 5858 5208 1 763 5867 3 2 0 chrUextra 23410717 23411349 -5593307 + LSU-rRNA_Dme rRNA rRNA 3266 3898 -2 1 763 3240 173 11 8 chrUextra 23411474 23412116 -5592540 - SAR_DM Satellite Satellite -583 889 246 1 763 269 133 0 0 chrUextra 23412076 23412121 -5592535 + ARS406_DM Unknown Unknown 1 45 -308 1 763 1363 22 21 21 chrUextra 23412221 23412408 -5592248 + NTS_DM Other Other 54 240 0 1 763 1995 4 17 13 chrUextra 23412408 23412647 -5592009 + NTS_DM Other Other 1 240 0 1 763 1867 0 13 18 chrUextra 23412647 23412872 -5591784 + NTS_DM Other Other 1 224 -16 1 763 5721 14 0 15 chrUextra 23412973 23413625 -5591031 - CIRCE LINE Composite -2127 4229 3588 1 763 2733 77 15 17 chrUextra 23413726 23414377 -5590279 + DMSAT6 Satellite Satellite 1 650 0 1 763 5759 11 1 1 chrUextra 23414477 23415129 -5589527 + R1_DM LINE R1 3496 4147 -1209 1 763 5916 0 0 1 chrUextra 23415229 23415881 -5588775 - R1_DM LINE R1 -2007 3349 2699 1 763 1539 0 0 0 chrUextra 23415981 23416152 -5588504 + (GAGAA)n Simple_repeat Simple_repeat 2 172 0 1 763 456 104 0 0 chrUextra 23416733 23416800 -5587856 + (CATA)n Simple_repeat Simple_repeat 1 67 0 1 763 2117 16 8 12 chrUextra 23416800 23417056 -5587600 + BLASTOPIA_LTR LTR Gypsy 2 256 -19 1 763 2927 0 3 0 chrUextra 23417062 23417385 -5587271 + BLASTOPIA_I LTR Gypsy 1 324 -4157 1 763 2408 100 6 37 chrUextra 23417485 23418136 -5586520 - DMSAT6 Satellite Satellite -131 631 1 1 763 2767 164 14 56 chrUextra 23418237 23418863 -5585793 + SAR_DM Satellite Satellite 491 1090 -382 1 763 24 0 0 0 chrUextra 23419436 23419460 -5585196 + AT_rich Low_complexity Low_complexity 1 24 0 1 763 3338 25 2 0 chrUextra 23419741 23420136 -5584520 - Invader2_I LTR Gypsy -434 4158 3763 1 763 2086 35 0 0 chrUextra 23420134 23420393 -5584263 - Invader2_I LTR Gypsy -1021 3571 3313 1 763 3149 160 18 20 chrUextra 23420493 23421145 -5583511 - SAR_DM Satellite Satellite -489 983 333 1 763 5810 5 0 17 chrUextra 23421245 23421897 -5582759 - QUASIMODO_I LTR Gypsy -5311 749 109 1 763 4566 22 22 4 chrUextra 23421997 23422539 -5582117 - MAX_I LTR Pao -6010 1904 1353 1 763 1226 15 0 0 chrUextra 23422829 23422964 -5581692 - 5S_DM RNA RNA 0 135 1 1 763 1246 0 0 0 chrUextra 23423188 23423323 -5581333 - 5S_DM RNA RNA 0 135 1 1 763 4624 48 76 8 chrUextra 23423501 23424132 -5580524 - ACCORD2_I LTR Gypsy -4773 2439 1766 1 763 698 0 0 12 chrUextra 23424594 23424677 -5579979 + (TCTCC)n Simple_repeat Simple_repeat 2 83 0 1 763 191 0 148 0 chrUextra 23424680 23424734 -5579922 + (CTCA)n Simple_repeat Simple_repeat 3 64 0 1 763 197 52 172 20 chrUextra 23424748 23424847 -5579809 + (CTAAA)n Simple_repeat Simple_repeat 5 118 0 1 763 3995 25 143 0 chrUextra 23425006 23425522 -5579134 - PROTOP DNA P -3890 590 1 1 763 5955 6 1 0 chrUextra 23426509 23427161 -5577495 - FW_DM LINE Jockey -357 4335 3683 1 763 6022 1 0 0 chrUextra 23427261 23427913 -5576743 - FW_DM LINE Jockey -3365 1327 676 1 763 2667 75 23 21 chrUextra 23428013 23428665 -5575991 + DMSAT6 Satellite Satellite 1 652 -108 1 763 600 28 14 0 chrUextra 23428765 23428836 -5575820 + ROO_I LTR Pao 5570 5641 -2615 1 763 5335 5 0 2 chrUextra 23428833 23429417 -5575239 + ROO_I LTR Pao 6935 7517 -739 1 763 3446 46 1 14 chrUextra 23429520 23429959 -5574697 + STALKER4_LTR LTR Gypsy 1 399 -3 1 763 640 108 0 11 chrUextra 23430034 23430128 -5574528 + G3_DM LINE Jockey 1 93 -4512 1 763 5634 26 0 0 chrUextra 23430269 23430921 -5573735 + R1_DM LINE R1 2296 2947 -2409 1 763 6070 1 1 0 chrUextra 23431021 23431673 -5572983 - LSU-rRNA_Dme rRNA rRNA -550 3350 2698 1 763 5736 21 0 0 chrUextra 23431773 23432425 -5572231 + HETA LINE telomeric 2251 2902 -3179 1 763 4095 2 0 0 chrUextra 23432725 23433177 -5571479 + IDEFIX_I LTR Gypsy 1 452 -5176 1 763 933 121 0 14 chrUextra 23433277 23433420 -5571236 + Gypsy12A_LTR LTR Gypsy 1952 2092 -188 1 763 3882 2 0 0 chrUextra 23433420 23433844 -5570812 - Stalker2_LTR LTR Gypsy 0 424 1 1 763 691 0 0 0 chrUextra 23433844 23433929 -5570727 - Stalker2_I LTR Gypsy 0 7402 7318 1 763 1457 170 35 7 chrUextra 23434029 23434437 -5570219 + SAR_DM Satellite Satellite 1 419 -1043 1 763 463 82 0 0 chrUextra 23434473 23434534 -5570122 + FB4_DM DNA Tc1 2 62 -4027 1 763 632 173 37 53 chrUextra 23434492 23434681 -5569975 - FB4_DM DNA Tc1 -3276 813 628 1 763 5414 34 3 1 chrUextra 23434781 23435432 -5569224 + ZAM_I LTR Gypsy 3065 3716 -3774 1 763 2912 21 13 3 chrUextra 23435533 23435912 -5568744 + STALKER4_I LTR Gypsy 6148 6530 0 1 763 2484 11 0 0 chrUextra 23435912 23436185 -5568471 + STALKER4_LTR LTR Gypsy 1 273 -129 1 763 545 31 696 0 chrUextra 23437037 23437160 -5567496 + PROTOP_B DNA P 648 856 -297 1 763 3006 136 4 8 chrUextra 23437148 23437660 -5566996 - Jockey2 LINE Jockey -1608 1820 1419 1 763 5702 20 1 0 chrUextra 23439291 23439942 -5564714 + R1_DM LINE R1 1586 2237 -3119 1 763 845 40 0 0 chrUextra 23440042 23440143 -5564513 + TART LINE telomeric 4774 4874 -9603 1 763 3507 42 36 122 chrUextra 23440144 23440693 -5563963 + TART LINE telomeric 4554 5055 -9422 1 763 1262 27 0 0 chrUextra 23440793 23440940 -5563716 - NTS_DM Other Other -93 147 1 1 763 1558 15 20 20 chrUextra 23440940 23441143 -5563513 - NTS_DM Other Other 0 240 38 1 763 898 9 9 27 chrUextra 23441143 23441254 -5563402 - NTS_DM Other Other -107 133 25 1 763 21 57 0 0 chrUextra 23441280 23441315 -5563341 + AT_rich Low_complexity Low_complexity 1 35 0 1 763 957 31 0 8 chrUextra 23441315 23441444 -5563212 - NTS_DM Other Other -39 201 74 1 763 2006 0 17 13 chrUextra 23441556 23441795 -5562861 + NTS_DM Other Other 1 240 0 1 763 1984 13 8 8 chrUextra 23441795 23442035 -5562621 + NTS_DM Other Other 1 240 0 1 763 1308 26 6 0 chrUextra 23442035 23442191 -5562465 + NTS_DM Other Other 1 157 -83 1 763 5860 0 0 1 chrUextra 23442298 23442946 -5561710 + ROO_I LTR Pao 881 1527 -6729 1 763 2977 178 10 22 chrUextra 23443048 23443640 -5561016 + SAR_DM Satellite Satellite 1 641 -396 1 763 288 94 0 70 chrUextra 23443640 23443697 -5560959 - XDMR_DM Unknown Unknown -8 352 300 1 763 551 176 81 51 chrUextra 23443873 23444070 -5560586 + DMCR1A LINE CR1 4227 4429 -41 1 763 2399 41 3 86 chrUextra 23444077 23444448 -5560208 - Gypsy12_LTR LTR Gypsy -1400 936 597 1 763 409 0 0 0 chrUextra 23444548 23444595 -5560061 - NTS_DM Other Other -193 47 1 1 763 1850 4 17 13 chrUextra 23444595 23444834 -5559822 - NTS_DM Other Other 0 240 1 1 763 1804 13 17 13 chrUextra 23444834 23445073 -5559583 - NTS_DM Other Other 0 240 1 1 763 757 25 32 32 chrUextra 23445073 23445199 -5559457 - NTS_DM Other Other 0 240 115 1 763 23 68 0 0 chrUextra 23445465 23445509 -5559147 + AT_rich Low_complexity Low_complexity 1 44 0 1 763 21 89 0 0 chrUextra 23445547 23445603 -5559053 + AT_rich Low_complexity Low_complexity 1 56 0 1 763 5325 17 0 1 chrUextra 23446050 23446701 -5557955 + DOC2_DM LINE Jockey 2729 3378 -1415 1 763 2900 172 25 6 chrUextra 23446801 23447450 -5557206 - SAR_DM Satellite Satellite -466 1006 346 1 763 5561 9 0 0 chrUextra 23447552 23448203 -5556453 + R1_DM LINE R1 4334 4984 -372 1 763 641 0 0 13 chrUextra 23448303 23448381 -5556275 + LSU-rRNA_Dme rRNA rRNA 1712 1788 -2112 1 763 4533 2 0 4 chrUextra 23448426 23448954 -5555702 + LSU-rRNA_Dme rRNA rRNA 1788 2313 -1587 1 763 5608 5 1 0 chrUextra 23449054 23449705 -5554951 + LSU-rRNA_Dme rRNA rRNA 1874 2525 -1375 1 763 2902 176 11 8 chrUextra 23449805 23450456 -5554200 - SAR_DM Satellite Satellite -468 1004 352 1 763 265 185 24 24 chrUextra 23450556 23450639 -5554017 + XDMR_DM Unknown Unknown 278 360 0 1 763 2558 182 13 24 chrUextra 23450572 23451207 -5553449 - SAR_DM Satellite Satellite -371 1101 474 1 763 2985 167 9 9 chrUextra 23451307 23451958 -5552698 - SAR_DM Satellite Satellite -489 983 333 1 763 637 187 13 51 chrUextra 23452108 23452266 -5552390 - HETRP_DM Satellite Satellite -203 1669 1518 1 763 665 186 7 14 chrUextra 23452383 23452525 -5552131 - HETRP_DM Satellite Satellite -203 1669 1529 1 763 3650 0 7 0 chrUextra 23452809 23453235 -5551421 - TART LINE telomeric -6953 7524 7096 1 763 1989 4 0 0 chrUextra 23453232 23453460 -5551196 - TART LINE telomeric -7568 6909 6682 1 763 4581 78 0 0 chrUextra 23453560 23454211 -5550445 - STALKER4_I LTR Gypsy -477 6053 5403 1 763 223 0 0 161 chrUextra 23454311 23454510 -5550146 + (TCTTG)n Simple_repeat Simple_repeat 2 168 0 1 763 2096 189 88 23 chrUextra 23455062 23455713 -5548943 + TAHRE LINE telomeric 7213 7905 -2558 1 763 5282 18 3 0 chrUextra 23455813 23456464 -5548192 - Gypsy4_I LTR Gypsy -1447 4841 4189 1 763 2698 181 26 9 chrUextra 23456574 23457215 -5547441 - SAR_DM Satellite Satellite -396 1076 425 1 763 5296 20 5 0 chrUextra 23457315 23457966 -5546690 + R1_DM LINE R1 2601 3254 -2102 1 763 5423 14 0 1 chrUextra 23458066 23458717 -5545939 + DOC2_DM LINE Jockey 2737 3386 -1407 1 763 4267 35 167 0 chrUextra 23458817 23459468 -5545188 - R1_DM LINE R1 -3296 2060 1301 1 763 1757 49 0 0 chrUextra 23459573 23459799 -5544857 + PROTOP DNA P 74 299 -4181 1 763 1544 53 102 2 chrUextra 23459786 23460219 -5544437 + PROTOP_A DNA P 522 862 -243 1 763 244 167 19 0 chrUextra 23460319 23460373 -5544283 + XDMR Unknown Unknown 307 361 0 1 763 2596 184 9 20 chrUextra 23460327 23460970 -5543686 - SAR_DM Satellite Satellite -361 1111 476 1 763 5384 11 0 1 chrUextra 23461070 23461721 -5542935 + STALKER4_I LTR Gypsy 2480 3129 -3401 1 95 2410 197 56 5 chrUextra 23461824 23462471 -5542185 + SAR_DM Satellite Satellite 347 1026 -446 1 764 501 197 71 63 chrUextra 23462575 23462829 -5541827 + BATUMI_I LTR Pao 469 724 -7239 1 764 789 123 8 232 chrUextra 23462803 23463183 -5541473 + BATUMI_I LTR Pao 595 889 -7074 1 764 5093 5 1 1 chrUextra 23463323 23463974 -5540682 - FB4_DM DNA Tc1 -519 3570 2920 1 764 2723 187 8 8 chrUextra 23464075 23464712 -5539944 + SAR_DM Satellite Satellite 267 903 -569 1 764 786 39 0 0 chrUextra 23464622 23464725 -5539931 - ARS406_DM Unknown Unknown -164 189 87 1 764 5357 1 0 0 chrUextra 23464825 23465476 -5539180 + DM176_I LTR Gypsy 1267 1917 -4503 1 764 2481 90 217 0 chrUextra 23465577 23466227 -5538429 - IDEFIX_I LTR Gypsy -584 5044 4254 1 764 4540 22 0 0 chrUextra 23466327 23466874 -5537782 + R1_DM LINE R1 3113 3659 -1697 1 764 765 66 9 0 chrUextra 23466872 23466978 -5537678 + R1_DM LINE R1 4833 4939 -417 1 764 852 107 6 18 chrUextra 23467078 23467589 -5537067 - RSP Satellite Satellite -2 505 1 1 764 676 71 0 20 chrUextra 23467628 23467729 -5536927 - RSP Satellite Satellite 0 118 20 1 764 2264 74 27 43 chrUextra 23467829 23468402 -5536254 - NINJA_I LTR Pao -5489 522 1 1 764 585 51 13 0 chrUextra 23468402 23468480 -5536176 - NINJA_LTR LTR Pao 0 317 239 1 764 5333 21 0 1 chrUextra 23468580 23469231 -5535425 - FW_DM LINE Jockey -64 4628 3979 1 764 378 0 0 0 chrUextra 23469331 23469373 -5535283 + (TTCTC)n Simple_repeat Simple_repeat 5 46 0 1 764 5383 11 0 5 chrUextra 23470082 23470733 -5533923 - IDEFIX_I LTR Gypsy -2414 3214 2567 1 764 2987 23 72 0 chrUextra 23470834 23471484 -5533172 - R1_DM LINE R1 -1528 3828 3132 1 764 4375 12 63 3 chrUextra 23471584 23472235 -5532421 + SSU-rRNA_Dme rRNA rRNA 845 1534 -461 1 764 2878 9 0 0 chrUextra 23472335 23472667 -5531989 - LINEJ1_DM LINE Jockey -1093 3927 3596 1 764 551 0 128 9 chrUextra 23472668 23472983 -5531673 + (TA)n Simple_repeat Simple_repeat 1 352 0 1 764 2253 189 11 8 chrUextra 23473086 23473731 -5530925 + SAR_DM Satellite Satellite 1 646 -677 1 764 1628 282 25 28 chrUextra 23473839 23474478 -5530178 - Gypsy6_I LTR Gypsy -4389 2623 1987 1 764 4877 2 5 7 chrUextra 23474588 23475176 -5529480 + LSU-rRNA_Dme rRNA rRNA 1202 1788 -2112 1 764 5138 1 123 0 chrUextra 23475339 23475990 -5528666 + TART LINE telomeric 5839 6569 -7908 1 764 3427 84 65 32 chrUextra 23476090 23476741 -5527915 + STALKER4_I LTR Gypsy 666 1337 -5193 1 764 4812 24 3 40 chrUextra 23476841 23477492 -5527164 + DOC2_DM LINE Jockey 828 1454 -3339 1 764 2107 32 7 17 chrUextra 23477592 23477880 -5526776 - BATUMI_I LTR Pao -1087 6876 6592 1 764 1113 66 16 47 chrUextra 23477833 23478024 -5526632 + BATUMI_I LTR Pao 7779 7963 0 1 764 1423 47 5 40 chrUextra 23478024 23478243 -5526413 + BATUMI_I LTR Pao 7002 7212 -751 1 764 2792 181 12 8 chrUextra 23478343 23478994 -5525662 + SAR_DM Satellite Satellite 198 851 -621 1 764 3350 10 3 0 chrUextra 23479094 23479486 -5525170 + Invader1_LTR LTR Gypsy 31 423 0 1 764 2259 8 0 0 chrUextra 23479486 23479745 -5524911 + Invader1_I LTR Gypsy 1 259 -2927 1 764 5695 1 1 0 chrUextra 23479845 23480496 -5524160 + LSU-rRNA_Dme rRNA rRNA 2913 3564 -336 1 764 686 193 264 91 chrUextra 23480602 23481007 -5523649 - TAHRE LINE telomeric -3988 10489 9807 1 764 1376 134 8 16 chrUextra 23480997 23481247 -5523409 - Gypsy12A_LTR LTR Gypsy -18 2262 2015 1 764 2302 80 26 35 chrUextra 23481347 23481998 -5522658 - DMSAT6 Satellite Satellite -7 645 1 1 764 5326 26 1 1 chrUextra 23482098 23482749 -5521907 + R1_DM LINE R1 4346 4996 -360 1 764 2419 106 21 10 chrUextra 23482851 23483469 -5521187 + DMSAT6 Satellite Satellite 1 624 -74 1 764 694 0 12 0 chrUextra 23483600 23483683 -5520973 + LSU-rRNA_Dme rRNA rRNA 3817 3900 0 1 764 22 56 0 0 chrUextra 23483755 23483791 -5520865 + AT_rich Low_complexity Low_complexity 1 36 0 1 764 246 150 0 0 chrUextra 23483796 23483836 -5520820 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 764 246 150 0 0 chrUextra 23483888 23483928 -5520728 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 764 246 150 0 0 chrUextra 23483980 23484020 -5520636 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 764 255 125 0 0 chrUextra 23484063 23484103 -5520553 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 764 22 56 0 0 chrUextra 23484116 23484152 -5520504 + AT_rich Low_complexity Low_complexity 1 36 0 1 764 532 29 0 41 chrUextra 23484178 23484251 -5520405 + NTS_DM Other Other 25 94 -146 1 764 3949 114 26 14 chrUextra 23484351 23485002 -5519654 + Gypsy12_I LTR Gypsy 2507 3165 -2381 1 764 5452 5 2 0 chrUextra 23485102 23485744 -5518912 - QUASIMODO_LTR LTR Gypsy -15 643 1 1 764 2431 32 0 28 chrUextra 23486130 23486453 -5518203 - NINJA_LTR LTR Pao -3 314 1 1 764 402 20 0 0 chrUextra 23486453 23486504 -5518152 - NINJA_I LTR Pao 0 6011 5961 1 764 3262 126 4 4 chrUextra 23486604 23487255 -5517401 - BATUMI_I LTR Pao -3262 4652 3926 1 764 3879 16 8 4 chrUextra 23487355 23488006 -5516650 - MDG3_I LTR Gypsy -5 4981 4262 1 764 21 89 0 0 chrUextra 23488457 23488513 -5516143 + AT_rich Low_complexity Low_complexity 1 56 0 1 764 1986 0 0 0 chrUextra 23488532 23488757 -5515899 - SSU-rRNA_Dme rRNA rRNA 0 1995 1771 1 764 3327 205 21 28 chrUextra 23488858 23490259 -5514397 - SAR_DM Satellite Satellite -404 1391 1 1 764 246 150 0 0 chrUextra 23490398 23490438 -5514218 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 764 246 150 0 0 chrUextra 23490490 23490530 -5514126 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 764 255 125 0 0 chrUextra 23490573 23490613 -5514043 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 764 22 56 0 0 chrUextra 23490626 23490662 -5513994 + AT_rich Low_complexity Low_complexity 1 36 0 1 764 870 9 0 27 chrUextra 23490688 23490800 -5513856 + NTS_DM Other Other 25 133 -107 1 764 1246 18 0 12 chrUextra 23490800 23490966 -5513690 + NTS_DM Other Other 38 201 -39 1 764 28 48 0 0 chrUextra 23491907 23491949 -5512707 + AT_rich Low_complexity Low_complexity 1 42 0 1 764 32 0 0 0 chrUextra 23492278 23492310 -5512346 + AT_rich Low_complexity Low_complexity 1 32 0 1 764 614 0 0 0 chrUextra 23492442 23492512 -5512144 + SSU-rRNA_Dme rRNA rRNA 1 70 -1925 1 764 2331 0 4 4 chrUextra 23492612 23492884 -5511772 + SSU-rRNA_Dme rRNA rRNA 1724 1995 0 1 764 21 89 0 0 chrUextra 23492903 23492959 -5511697 + AT_rich Low_complexity Low_complexity 1 56 0 1 764 23 68 0 0 chrUextra 23493574 23493618 -5511038 + AT_rich Low_complexity Low_complexity 1 44 0 1 764 26 30 0 0 chrUextra 23493664 23493697 -5510959 + AT_rich Low_complexity Low_complexity 1 33 0 1 764 4889 22 3 0 chrUextra 23494114 23494709 -5509947 - R1_DM LINE R1 -353 5003 4407 1 764 309 0 0 0 chrUextra 23494729 23494765 -5509891 - R1_DM LINE R1 -1074 4282 4247 1 764 5276 9 5 0 chrUextra 23494865 23495516 -5509140 + Invader2_I LTR Gypsy 3731 4384 -208 1 764 2126 4 0 23 chrUextra 23495616 23495872 -5508784 - CIRCE LINE Composite -4219 2137 1888 1 764 504 299 46 46 chrUextra 23495872 23495939 -5508717 - Gypsy12_I LTR Gypsy -1389 4157 3835 1 764 2634 28 0 0 chrUextra 23495948 23496267 -5508389 - CIRCE LINE Composite -4474 1882 1564 1 764 1830 93 107 50 chrUextra 23496367 23496787 -5507869 + BATUMI_I LTR Pao 156 599 -7364 1 764 391 70 42 0 chrUextra 23496809 23496880 -5507776 + (CATATA)n Simple_repeat Simple_repeat 4 77 0 1 764 342 52 0 79 chrUextra 23496882 23496945 -5507711 + BATUMI_I LTR Pao 712 769 -7194 1 764 5515 5 1 0 chrUextra 23497118 23497769 -5506887 + STALKER4_I LTR Gypsy 1799 2450 -4080 1 764 4315 17 20 1 chrUextra 23497869 23498517 -5506139 - MAX_I LTR Pao -6999 915 309 1 764 5293 21 1 1 chrUextra 23498620 23499271 -5505385 + R1_DM LINE R1 3453 4103 -1253 1 764 5126 19 0 0 chrUextra 23499372 23500000 -5504656 - MDG1_I LTR Gypsy -576 6020 5393 1 764 2863 6 3 0 chrUextra 23500122 23500472 -5504184 - Copia_I LTR Copia -2063 2530 2180 1 764 2493 7 0 0 chrUextra 23500477 23500773 -5503883 - Copia_I LTR Copia -3056 1537 1242 1 764 946 75 9 21 chrUextra 23500886 23501524 -5503132 + RSP Satellite Satellite 1 630 0 1 764 5501 8 0 1 chrUextra 23501624 23502275 -5502381 - DOC2_DM LINE Jockey -207 4586 3937 1 764 5347 17 1 1 chrUextra 23502376 23503026 -5501630 - R1_DM LINE R1 -1528 3828 3179 1 764 662 0 13 0 chrUextra 23503126 23503204 -5501452 + (TTGTG)n Simple_repeat Simple_repeat 2 80 0 1 764 4417 0 0 0 chrUextra 23503204 23503707 -5500949 - TABOR_LTR LTR Gypsy -3 503 1 1 764 542 0 0 0 chrUextra 23503705 23503777 -5500879 - TABOR_I LTR Gypsy 0 6336 6265 1 764 2971 166 17 8 chrUextra 23503881 23504525 -5500131 + SAR_DM Satellite Satellite 246 895 -577 1 764 1261 58 6 0 chrUextra 23504628 23504800 -5499856 - R1_DM LINE R1 -5183 173 1 1 764 3132 18 128 0 chrUextra 23504833 23505279 -5499377 - R1_DM LINE R1 0 5356 4854 1 764 5267 12 1 3 chrUextra 23505379 23506030 -5498626 - DMRT1B LINE R1 -3920 1263 614 1 764 610 14 0 0 chrUextra 23506130 23506201 -5498455 - NTS_DM Other Other -169 71 1 1 764 1740 21 17 17 chrUextra 23506201 23506441 -5498215 - NTS_DM Other Other 0 240 1 1 764 1781 13 17 17 chrUextra 23506441 23506681 -5497975 - NTS_DM Other Other 0 240 1 1 764 619 10 40 40 chrUextra 23506681 23506781 -5497875 - NTS_DM Other Other 0 240 141 1 764 4549 100 0 0 chrUextra 23506881 23507532 -5497124 + Gypsy12_I LTR Gypsy 3457 4107 -1439 1 764 22 56 0 0 chrUextra 23507723 23507759 -5496897 + AT_rich Low_complexity Low_complexity 1 36 0 1 764 246 150 0 0 chrUextra 23507764 23507804 -5496852 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 764 3766 0 0 0 chrUextra 23507824 23508252 -5496404 + ROO_LTR LTR Pao 1 428 0 1 764 268 0 0 0 chrUextra 23508252 23508283 -5496373 + ROO_I LTR Pao 1 31 -8225 1 764 3532 63 0 6 chrUextra 23508383 23508874 -5495782 + BATUMI_I LTR Pao 7476 7963 0 1 764 983 62 16 22 chrUextra 23508874 23509034 -5495622 + BATUMI_LTR LTR Pao 35 166 -106 1 764 711 0 0 0 chrUextra 23509134 23509213 -5495443 + (GAGAA)n Simple_repeat Simple_repeat 2 80 0 1 764 1212 63 0 0 chrUextra 23509216 23509391 -5495265 + (ATAAG)n Simple_repeat Simple_repeat 4 178 0 1 764 1458 26 0 11 chrUextra 23509391 23509666 -5494990 + (CAGAT)n Simple_repeat Simple_repeat 1 272 0 1 764 909 35 0 0 chrUextra 23509670 23509783 -5494873 + (CTAAG)n Simple_repeat Simple_repeat 1 113 0 1 764 5210 12 74 6 chrUextra 23509886 23510536 -5494120 + FW_DM LINE Jockey 3390 4083 -609 1 764 549 346 33 31 chrUextra 23512159 23512672 -5491984 - Copia2_I LTR Copia -1197 2965 2452 1 764 836 17 8 57 chrUextra 23512889 23513011 -5491645 - NINJA_LTR LTR Pao -201 116 1 1 764 4174 29 4 2 chrUextra 23513011 23513540 -5491116 - NINJA_I LTR Pao 0 6011 5482 1 764 2318 103 12 45 chrUextra 23513641 23514291 -5490365 - DMSAT6 Satellite Satellite -79 629 1 1 764 5189 28 40 0 chrUextra 23514391 23515042 -5489614 - R1_DM LINE R1 -3237 2119 1443 1 764 2100 249 52 8 chrUextra 23515145 23516533 -5488123 - SAR_DM Satellite Satellite -535 1449 1 1 764 2451 10 17 0 chrUextra 23516644 23516936 -5487720 - DMRT1B LINE R1 -1351 3832 3536 1 764 549 0 0 0 chrUextra 23516936 23516997 -5487659 + (CACAA)n Simple_repeat Simple_repeat 1 61 0 1 764 4515 53 3 45 chrUextra 23517395 23518046 -5486610 - R1_DM LINE R1 -4503 853 230 1 764 4175 106 32 9 chrUextra 23518146 23518797 -5485859 - Gypsy12_I LTR Gypsy -3403 2143 1478 1 764 336 220 18 0 chrUextra 23518900 23519009 -5485647 + (TTTG)n Simple_repeat Simple_repeat 4 114 0 1 764 3402 2 0 5 chrUextra 23519010 23519413 -5485243 + STALKER4_LTR LTR Gypsy 2 402 0 1 764 943 0 0 53 chrUextra 23519413 23519546 -5485110 + STALKER4_I LTR Gypsy 1 126 -6404 1 764 5458 2 5 3 chrUextra 23519654 23520299 -5484357 - LSU-rRNA_Dme rRNA rRNA -2160 1740 1095 1 764 678 143 0 0 chrUextra 23520400 23520519 -5484137 + (TATG)n Simple_repeat Simple_repeat 2 120 0 1 764 1158 122 0 0 chrUextra 23520518 23520698 -5483958 + (TA)n Simple_repeat Simple_repeat 1 180 0 1 764 1071 139 0 0 chrUextra 23520728 23520908 -5483748 + (TATG)n Simple_repeat Simple_repeat 1 180 0 1 764 789 148 0 19 chrUextra 23520870 23521029 -5483627 + (TA)n Simple_repeat Simple_repeat 1 156 0 1 764 5326 32 0 0 chrUextra 23521150 23521801 -5482855 + R2_DM LINE R2 2198 2848 -759 1 764 251 130 0 0 chrUextra 23521901 23521947 -5482709 - ARS406_DM Unknown Unknown -307 46 1 1 764 2664 182 22 9 chrUextra 23521907 23522549 -5482107 + SAR_DM Satellite Satellite 246 895 -577 1 764 2864 180 6 8 chrUextra 23522652 23523303 -5481353 - SAR_DM Satellite Satellite -618 854 205 1 764 5497 3 3 1 chrUextra 23523405 23524054 -5480602 - R1_DM LINE R1 -2003 3353 2704 1 764 1599 55 0 2 chrUextra 23524154 23524619 -5480037 + (TCTA)n Simple_repeat Simple_repeat 1 463 0 1 764 1460 0 0 22 chrUextra 23524620 23524804 -5479852 + (ATCG)n Simple_repeat Simple_repeat 1 180 0 1 764 402 0 0 0 chrUextra 23524905 23524952 -5479704 - ROO_LTR LTR Pao -381 47 1 1 764 4552 30 0 2 chrUextra 23524952 23525556 -5479100 - ROO_I LTR Pao 0 8256 7654 1 764 1571 0 6 0 chrUextra 23525675 23525854 -5478802 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 764 524 214 0 0 chrUextra 23526407 23526533 -5478123 - ARS406_DM Unknown Unknown -227 126 1 1 764 2431 171 31 28 chrUextra 23526436 23527054 -5477602 + SAR_DM Satellite Satellite 191 810 -662 1 764 834 364 21 2 chrUextra 23527158 23527643 -5477013 - Gypsy6_I LTR Gypsy -5574 1438 945 1 764 920 86 9 21 chrUextra 23528667 23529305 -5475351 - RSP Satellite Satellite 0 630 1 1 764 2384 90 11 23 chrUextra 23530162 23530803 -5473853 + DMSAT6 Satellite Satellite 1 633 -37 1 764 686 269 0 0 chrUextra 23531146 23531328 -5473328 + Gypsy3_I LTR Gypsy 2578 2759 -3418 1 764 1125 228 0 0 chrUextra 23531323 23531564 -5473092 + Gypsy6_I LTR Gypsy 4549 4789 -2223 1 764 396 91 0 0 chrUextra 23531670 23531736 -5472920 + (TCTTG)n Simple_repeat Simple_repeat 2 67 0 1 764 2937 175 8 8 chrUextra 23532415 23533053 -5471603 - SAR_DM Satellite Satellite -466 1006 369 1 764 652 182 7 14 chrUextra 23533166 23533305 -5471351 + HETRP_DM Satellite Satellite 1532 1669 -203 1 764 655 186 7 14 chrUextra 23533440 23533582 -5471074 + HETRP_DM Satellite Satellite 1529 1669 -203 1 764 401 204 0 92 chrUextra 23533698 23533817 -5470839 + HETRP_DM Satellite Satellite 1518 1625 -247 1 764 2417 174 46 17 chrUextra 23533936 23534568 -5470088 + SAR_DM Satellite Satellite 208 857 -615 1 764 2653 166 11 5 chrUextra 23534668 23535307 -5469349 - SAR_DM Satellite Satellite -641 642 1 1 764 1176 0 0 0 chrUextra 23535545 23535680 -5468976 - 5S_DM RNA RNA 0 135 1 1 764 1135 15 0 0 chrUextra 23535904 23536039 -5468617 - 5S_DM RNA RNA 0 135 1 1 764 3154 43 0 0 chrUextra 23536921 23537338 -5467318 + I_DM LINE I 770 1186 -5045 1 764 587 155 353 42 chrUextra 23537334 23537572 -5467084 + ROVER-LTR_DM LTR Gypsy 55 366 -1 1 764 5524 0 0 1 chrUextra 23537672 23538323 -5466333 + ROO_I LTR Pao 2643 3292 -4964 1 764 2903 169 11 14 chrUextra 23538423 23539070 -5465586 - SAR_DM Satellite Satellite -1136 645 1 1 764 1823 0 0 0 chrUextra 23539174 23539384 -5465272 + GTWIN_LTR LTR Gypsy 286 495 0 1 764 3836 0 0 0 chrUextra 23539384 23539825 -5464831 + GTWIN_I LTR Gypsy 1 441 -5980 1 764 4180 78 126 17 chrUextra 23539925 23540576 -5464080 - Gypsy12_I LTR Gypsy -64 5482 4761 1 764 2960 150 28 17 chrUextra 23540676 23541325 -5463331 - SAR_DM Satellite Satellite -471 1001 346 1 764 2889 182 6 5 chrUextra 23541430 23542077 -5462579 + SAR_DM Satellite Satellite 332 979 -493 1 764 5305 16 0 9 chrUextra 23542929 23543580 -5461076 + G2_DM LINE Jockey 2395 3039 -63 1 764 241 158 0 95 chrUextra 23543692 23543797 -5460859 + DM412 LTR Gypsy 6705 6799 -98 1 764 1554 27 0 8 chrUextra 23543801 23544183 -5460473 + (TAA)n Simple_repeat Simple_repeat 1 378 0 1 764 767 97 185 7 chrUextra 23544185 23544331 -5460325 + MDG1_LTR LTR Gypsy 89 260 -182 1 764 442 99 0 0 chrUextra 23544432 23544503 -5460153 - ARS406_DM Unknown Unknown -282 71 1 1 764 2788 183 14 5 chrUextra 23544441 23545082 -5459574 + SAR_DM Satellite Satellite 224 870 -602 1 764 2562 189 11 19 chrUextra 23545182 23545830 -5458826 + SAR_DM Satellite Satellite 469 1111 -361 1 764 2671 174 11 11 chrUextra 23546688 23547309 -5457347 + SAR_DM Satellite Satellite 456 1076 -396 1 764 3934 4 0 8 chrUextra 23547610 23548086 -5456570 - LINEJ1_DM LINE Jockey 0 5020 4549 1 764 2174 0 0 0 chrUextra 23548186 23548454 -5456202 + Invader2_I LTR Gypsy 4322 4589 -3 1 764 2332 0 0 0 chrUextra 23548457 23548723 -5455933 + Invader2_LTR LTR Gypsy 1 266 0 1 764 713 0 0 0 chrUextra 23549688 23549769 -5454887 - NTS_DM Other Other -159 81 1 1 764 1847 4 17 13 chrUextra 23549769 23550008 -5454648 - NTS_DM Other Other 0 240 1 1 764 1825 8 17 13 chrUextra 23550008 23550247 -5454409 - NTS_DM Other Other 0 240 1 1 764 615 0 43 33 chrUextra 23550247 23550339 -5454317 - NTS_DM Other Other 0 240 148 1 764 5571 0 0 0 chrUextra 23551190 23551841 -5452815 - MICROPIA_I LTR Gypsy -59 4417 3767 1 764 3429 37 0 2 chrUextra 23551979 23552408 -5452248 + ROO_LTR LTR Pao 1 428 0 1 764 902 75 13 33 chrUextra 23552441 23552592 -5452064 + ROO_I LTR Pao 114 261 -7995 1 764 262 31 0 0 chrUextra 23552692 23552724 -5451932 - NTS_DM Other Other -208 32 1 1 764 1408 20 20 20 chrUextra 23552724 23552927 -5451729 - NTS_DM Other Other 0 240 38 1 764 817 0 0 0 chrUextra 23552927 23553023 -5451633 - NTS_DM Other Other -107 133 38 1 764 832 9 9 27 chrUextra 23553023 23553134 -5451522 - NTS_DM Other Other -107 133 25 1 764 21 57 0 0 chrUextra 23553160 23553195 -5451461 + AT_rich Low_complexity Low_complexity 1 35 0 1 764 1023 27 0 7 chrUextra 23553195 23553342 -5451314 - NTS_DM Other Other -39 201 56 1 764 319 309 40 40 chrUextra 23553494 23553889 -5450767 - BLASTOPIA_I LTR Gypsy -2302 2586 2180 1 764 5472 5 0 5 chrUextra 23554192 23554842 -5449814 + R1_DM LINE R1 4565 5211 -145 1 764 2377 7 10 10 chrUextra 23555293 23555592 -5449064 + DM297_LTR LTR Gypsy 1 299 -115 1 764 3329 217 1 1 chrUextra 23555694 23556341 -5448315 - Gypsy6_I LTR Gypsy -2139 4873 4227 1 764 1030 26 0 0 chrUextra 23556442 23556559 -5448097 + ROO_I LTR Pao 4089 4205 -4051 1 764 4663 24 0 0 chrUextra 23556555 23557092 -5447564 - FW_DM LINE Jockey 0 4692 4156 1 764 5701 0 19 1 chrUextra 23557192 23557842 -5446814 - ROO_I LTR Pao -7008 1248 588 1 764 891 128 0 0 chrUextra 23558123 23558264 -5446392 + (TATG)n Simple_repeat Simple_repeat 2 142 0 1 764 1158 122 0 0 chrUextra 23558263 23558443 -5446213 + (TA)n Simple_repeat Simple_repeat 1 180 0 1 764 230 288 0 36 chrUextra 23558446 23558529 -5446127 - OSVALDO_LTR LTR Gypsy -1105 91 12 1 764 226 288 0 48 chrUextra 23558487 23558571 -5446085 + OSVALDO_LTR LTR Gypsy 12 91 -1105 1 764 1189 8 0 0 chrUextra 23558692 23558824 -5445832 - Copia2_I LTR Copia -3607 555 424 1 764 4565 8 0 0 chrUextra 23558824 23559319 -5445337 - GTWIN_LTR LTR Gypsy 0 495 1 1 764 5835 15 1 0 chrUextra 23559442 23560092 -5444564 - R1_DM LINE R1 -3090 2266 1616 1 764 772 112 4 53 chrUextra 23560192 23560347 -5444309 + STALKER4_LTR LTR Gypsy 249 392 -10 1 764 2439 98 13 26 chrUextra 23560351 23560812 -5443844 - DMSAT6 Satellite Satellite -10 460 6 1 764 2375 8 0 4 chrUextra 23560942 23561203 -5443453 - R2_DM LINE R2 -3347 260 1 1 764 3557 0 0 0 chrUextra 23561202 23561592 -5443064 - R1_DM LINE R1 -2403 2953 2564 1 764 3025 182 14 5 chrUextra 23561696 23562341 -5442315 - SAR_DM Satellite Satellite -593 879 229 1 764 1931 95 58 50 chrUextra 23562463 23562827 -5441829 - ROVER-LTR_DM LTR Gypsy 0 367 1 1 764 1247 142 75 19 chrUextra 23562827 23563092 -5441564 - ROVER-I_DM LTR Gypsy 0 6584 6305 1 764 3704 40 4 5 chrUextra 23563192 23563842 -5440814 - R1_DM LINE R1 -2260 3096 2415 1 764 3573 5 2 0 chrUextra 23563942 23564335 -5440321 - DMRT1B LINE R1 -539 4644 4251 1 764 2004 66 4 8 chrUextra 23564331 23564592 -5440064 + R1_DM LINE R1 176 435 -4921 1 764 3943 2 0 2 chrUextra 23564692 23565121 -5439535 + LSU-rRNA_Dme rRNA rRNA 2205 2632 -1268 1 764 1998 0 9 0 chrUextra 23565121 23565342 -5439314 + R1_DM LINE R1 1 223 -5133 1 764 771 89 315 0 chrUextra 23565443 23565589 -5439067 - TART LINE telomeric -10675 3802 3611 1 764 3396 70 142 6 chrUextra 23565591 23566092 -5438564 - TART LINE telomeric -6448 8029 7461 1 764 5654 34 0 0 chrUextra 23566192 23566842 -5437814 - R1_DM LINE R1 -3389 1967 1318 1 764 1821 277 25 29 chrUextra 23566942 23567592 -5437064 + ROVER-I_DM LTR Gypsy 1292 1938 -4646 1 764 2100 23 0 4 chrUextra 23567692 23567950 -5436706 - BATUMI_I LTR Pao -404 7559 7303 1 764 3017 25 8 8 chrUextra 23567973 23568342 -5436314 + BATUMI_I LTR Pao 6427 6795 -1168 1 764 2350 29 4 0 chrUextra 23568442 23568719 -5435937 - NINJA_I LTR Pao -1735 4276 3999 1 764 3220 31 23 10 chrUextra 23568696 23569092 -5435564 - NINJA_I LTR Pao -3164 2847 2447 1 764 738 12 0 0 chrUextra 23569193 23569273 -5435383 - LSU-rRNA_Dme rRNA rRNA -1181 2719 2640 1 764 5275 2 0 0 chrUextra 23569271 23569839 -5434817 - R1_DM LINE R1 0 5356 4789 1 764 1248 7 0 0 chrUextra 23570153 23570288 -5434368 - 5S_DM RNA RNA 0 135 1 1 764 582 15 0 0 chrUextra 23570526 23570592 -5434064 - 5S_DM RNA RNA 0 135 70 1 764 5486 42 1 1 chrUextra 23570692 23571342 -5433314 - R1_DM LINE R1 -3785 1571 922 1 764 1248 7 0 0 chrUextra 23571516 23571651 -5433005 - 5S_DM RNA RNA 0 135 1 1 764 1258 0 0 0 chrUextra 23571882 23572017 -5432639 - 5S_DM RNA RNA 0 135 1 1 764 2663 83 23 11 chrUextra 23572198 23572841 -5431815 - DMSAT6 Satellite Satellite -64 650 1 1 764 2990 190 8 8 chrUextra 23572942 23573590 -5431066 - SAR_DM Satellite Satellite -588 884 237 1 764 2482 185 73 20 chrUextra 23573692 23574337 -5430319 + SAR_DM Satellite Satellite 539 1217 -255 1 764 5763 21 0 0 chrUextra 23574442 23575092 -5429564 - R1_DM LINE R1 -1546 3810 3161 1 764 3019 178 18 6 chrUextra 23575195 23575821 -5428835 + SAR_DM Satellite Satellite 282 914 -558 1 764 5926 3 1 3 chrUextra 23575942 23576592 -5428064 - SSU-rRNA_Dme rRNA rRNA -793 1202 554 1 764 5702 26 0 0 chrUextra 23576692 23577342 -5427314 - R1_DM LINE R1 -1801 3555 2906 1 764 5989 3 0 1 chrUextra 23577442 23578092 -5426564 - LSU-rRNA_Dme rRNA rRNA -1361 2539 1891 1 764 5829 14 1 0 chrUextra 23578192 23578842 -5425814 - Invader3_I LTR Gypsy -3073 1815 1165 1 764 6001 1 0 0 chrUextra 23578942 23579592 -5425064 + DOC LINE Jockey 2708 3357 -1368 1 764 2879 163 8 60 chrUextra 23579704 23580342 -5424314 - SAR_DM Satellite Satellite -411 1061 457 1 764 5918 1 1 1 chrUextra 23580442 23581092 -5423564 - R1_DM LINE R1 -3652 1704 1055 1 764 5767 25 0 0 chrUextra 23581192 23581842 -5422814 - BATUMI_I LTR Pao -2794 5169 4520 1 764 2518 84 5 52 chrUextra 23581942 23582590 -5422066 - DMSAT6 Satellite Satellite -30 616 1 1 764 1356 12 0 18 chrUextra 23582741 23582906 -5421750 - NTS_DM Other Other -78 162 1 1 764 1948 13 17 13 chrUextra 23582906 23583145 -5421511 - NTS_DM Other Other 0 240 1 1 764 1564 5 20 15 chrUextra 23583145 23583342 -5421314 - NTS_DM Other Other 0 240 43 1 764 1616 66 5 0 chrUextra 23583881 23584092 -5420564 + Baggins1 LINE LOA 4791 5002 -451 1 764 2954 178 29 11 chrUextra 23584196 23584842 -5419814 - SAR_DM Satellite Satellite -593 879 222 1 764 6061 1 0 1 chrUextra 23584942 23585592 -5419064 - SSU-rRNA_Dme rRNA rRNA -1149 846 198 1 764 5539 35 3 0 chrUextra 23585692 23586342 -5418314 - MAX_I LTR Pao -4589 3325 2674 1 764 753 63 0 10 chrUextra 23586442 23586538 -5418118 + NINJA_LTR LTR Pao 222 316 -1 1 764 4343 16 0 0 chrUextra 23586538 23587092 -5417564 - QUASIMODO_I LTR Gypsy -44 6016 5463 1 764 5966 1 0 1 chrUextra 23587192 23587842 -5416814 + R1_DM LINE R1 3077 3725 -1631 1 764 2863 182 17 23 chrUextra 23587942 23588588 -5416068 + SAR_DM Satellite Satellite 462 1103 -369 1 764 2498 195 73 28 chrUextra 23588702 23589342 -5415314 - TAHRE LINE telomeric -630 9833 9165 1 764 2571 188 71 28 chrUextra 23589442 23590092 -5414564 - TAHRE LINE telomeric -642 9821 9144 1 764 5822 3 3 1 chrUextra 23590192 23590842 -5413814 + R1_DM LINE R1 862 1512 -3844 1 764 5931 3 1 3 chrUextra 23590942 23591592 -5413064 + LSU-rRNA_Dme rRNA rRNA 926 1574 -2326 1 764 642 0 0 0 chrUextra 23591692 23591763 -5412893 + ACCORD_I LTR Gypsy 6218 6288 0 1 764 3896 2 146 0 chrUextra 23591763 23592250 -5412406 + ACCORD_LTR LTR Gypsy 1 558 0 1 764 810 22 11 0 chrUextra 23592250 23592342 -5412314 + ACCORD_I LTR Gypsy 1 93 -6195 1 764 1111 20 7 7 chrUextra 23592445 23592593 -5412063 + NTS_DM Other Other 54 201 -39 1 764 928 9 0 27 chrUextra 23592645 23592757 -5411899 + NTS_DM Other Other 25 133 -107 1 764 1332 18 0 6 chrUextra 23592757 23592922 -5411734 + NTS_DM Other Other 38 201 -39 1 765 907 18 0 27 chrUextra 23592974 23593086 -5411570 + NTS_DM Other Other 25 133 -107 1 765 243 0 0 0 chrUextra 23593303 23593330 -5411326 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1 765 2776 189 8 20 chrUextra 23593942 23594591 -5410065 + SAR_DM Satellite Satellite 463 1103 -369 1 765 4811 40 0 0 chrUextra 23594692 23595287 -5409369 + I_DM LINE I 592 1186 -5045 1 765 395 74 0 0 chrUextra 23595283 23595337 -5409319 + ROVER-LTR_DM LTR Gypsy 55 108 -259 1 765 5938 1 1 1 chrUextra 23595442 23596091 -5408565 - R1_DM LINE R1 -3046 2310 1662 1 765 1158 122 0 0 chrUextra 23596192 23596422 -5408234 + (TA)n Simple_repeat Simple_repeat 1 230 0 1 765 3761 9 0 0 chrUextra 23596423 23596842 -5407814 + DM176_LTR LTR Gypsy 1 419 -88 1 765 2982 15 0 6 chrUextra 23596942 23597275 -5407381 + CIRCE LINE Composite 4042 4372 -1984 1 765 2871 9 3 0 chrUextra 23597275 23597592 -5407064 + Invader1_LTR LTR Gypsy 1 318 -105 1 765 3225 166 9 11 chrUextra 23597692 23598342 -5406314 - SAR_DM Satellite Satellite -546 926 278 1 765 3037 166 43 11 chrUextra 23598442 23599092 -5405564 - SAR_DM Satellite Satellite -455 1017 347 1 765 299 303 51 47 chrUextra 23599548 23599801 -5404855 + Copia2_I LTR Copia 2452 2705 -1457 1 765 3121 28 0 0 chrUextra 23599943 23600301 -5404355 - PROTOP_A DNA P -747 358 1 1 765 5628 12 1 1 chrUextra 23600692 23601342 -5403314 - LSU-rRNA_Dme rRNA rRNA -2922 978 329 1 765 1006 47 0 0 chrUextra 23602192 23602319 -5402337 + ARS406_DM Unknown Unknown 63 189 -164 1 765 2252 189 98 29 chrUextra 23602216 23602841 -5401815 - SAR_DM Satellite Satellite -203 1269 602 1 765 5912 17 0 0 chrUextra 23602942 23603592 -5401064 + Gypsy12_I LTR Gypsy 2726 3375 -2171 1 765 1189 0 0 0 chrUextra 23604442 23604569 -5400087 + LSU-rRNA_Dme rRNA rRNA 3774 3900 0 1 765 27 0 0 0 chrUextra 23604641 23604668 -5399988 + AT_rich Low_complexity Low_complexity 1 27 0 1 765 266 196 0 19 chrUextra 23604670 23604722 -5399934 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 765 266 196 0 19 chrUextra 23604762 23604814 -5399842 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 765 928 9 0 27 chrUextra 23604887 23604999 -5399657 + NTS_DM Other Other 25 133 -107 1 765 846 0 0 0 chrUextra 23604999 23605092 -5399564 + NTS_DM Other Other 38 130 -110 1 765 1852 64 417 2 chrUextra 23605192 23605618 -5399038 + PROTOP_B DNA P 253 856 -297 1 765 1533 99 9 0 chrUextra 23605626 23605838 -5398818 - Jockey2 LINE Jockey -1608 1820 1607 1 765 3002 192 6 8 chrUextra 23605942 23606588 -5398068 + SAR_DM Satellite Satellite 208 852 -620 1 765 450 216 17 33 chrUextra 23606692 23606812 -5397844 + HETRP_DM Satellite Satellite 1565 1682 -190 1 765 246 32 0 0 chrUextra 23606927 23606958 -5397698 + (GA)n Simple_repeat Simple_repeat 2 32 0 1 765 547 212 15 29 chrUextra 23606958 23607094 -5397562 + HETRP_DM Satellite Satellite 1549 1682 -190 1 765 192 40 0 0 chrUextra 23607239 23607264 -5397392 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 765 333 234 0 13 chrUextra 23607264 23607342 -5397314 + HETRP_DM Satellite Satellite 1549 1625 -247 1 765 5718 2 0 0 chrUextra 23607459 23608092 -5396564 + LSU-rRNA_Dme rRNA rRNA 218 850 -3050 1 765 1331 45 6 0 chrUextra 23608192 23608349 -5396307 - Gypsy6A_LTR LTR Gypsy -233 187 30 1 765 232 54 0 51 chrUextra 23608349 23608388 -5396268 + G7_DM LINE Jockey 932 968 -224 1 765 1317 144 45 0 chrUextra 23608388 23608610 -5396046 - HOBO DNA hAT 0 3016 2785 1 765 894 67 0 49 chrUextra 23608614 23608756 -5395900 - PROTOP_B DNA P -706 447 313 1 765 233 29 0 29 chrUextra 23608759 23608794 -5395862 + (TAA)n Simple_repeat Simple_repeat 3 36 0 1 765 2505 267 21 0 chrUextra 23608805 23609228 -5395428 - PROTOP_B DNA P -723 430 1 1 765 330 101 102 6 chrUextra 23609393 23609465 -5395191 - TART LINE telomeric -3986 10491 10421 1 765 975 96 0 0 chrUextra 23609692 23609859 -5394797 + (TCTTG)n Simple_repeat Simple_repeat 4 170 0 1 765 3473 28 37 0 chrUextra 23610443 23610879 -5393777 + IDEFIX_I LTR Gypsy 4585 5036 -592 1 765 1984 5 0 0 chrUextra 23610879 23611092 -5393564 - ROO_LTR LTR Pao 0 428 216 1 765 922 62 53 8 chrUextra 23611192 23611323 -5393333 - ROVER-LTR_DM LTR Gypsy -230 137 1 1 765 275 150 264 57 chrUextra 23611323 23611414 -5393242 + STALKER4_LTR LTR Gypsy 261 373 -29 1 765 411 17 15 77 chrUextra 23611467 23611532 -5393124 + STALKER4_I LTR Gypsy 17 77 -6453 1 765 272 143 0 0 chrUextra 23611533 23611582 -5393074 - DM176_I LTR Gypsy -3192 3228 3180 1 765 317 296 18 25 chrUextra 23612341 23612504 -5392152 - MDG3_I LTR Gypsy -1562 3424 3263 1 765 23 68 0 0 chrUextra 23613193 23613237 -5391419 + AT_rich Low_complexity Low_complexity 1 44 0 1 765 26 30 0 0 chrUextra 23613283 23613316 -5391340 + AT_rich Low_complexity Low_complexity 1 33 0 1 765 568 15 0 0 chrUextra 23613442 23613509 -5391147 + R1_DM LINE R1 5290 5356 0 1 765 4061 66 4 4 chrUextra 23613542 23614092 -5390564 + R1_DM LINE R1 1 550 -4806 1 765 2839 174 14 8 chrUextra 23614194 23614833 -5389823 + SAR_DM Satellite Satellite 434 1076 -396 1 765 5502 6 0 0 chrUextra 23615692 23616342 -5388314 - R1_DM LINE R1 -2094 3262 2613 1 765 2325 92 23 15 chrUextra 23616442 23617091 -5387565 + DMSAT6 Satellite Satellite 1 654 -3 1 765 262 106 0 21 chrUextra 23617691 23617739 -5386917 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 765 351 49 65 16 chrUextra 23617761 23617823 -5386833 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 765 2918 166 14 11 chrUextra 23617944 23618591 -5386065 + SAR_DM Satellite Satellite 326 974 -498 1 765 1335 40 20 20 chrUextra 23618710 23618913 -5385743 - NTS_DM Other Other 0 240 38 1 765 817 0 0 0 chrUextra 23618913 23619009 -5385647 - NTS_DM Other Other -107 133 38 1 765 809 19 9 27 chrUextra 23619009 23619120 -5385536 - NTS_DM Other Other -107 133 25 1 765 21 57 0 0 chrUextra 23619146 23619181 -5385475 + AT_rich Low_complexity Low_complexity 1 35 0 1 765 1184 25 0 6 chrUextra 23619181 23619342 -5385314 - NTS_DM Other Other -39 201 42 1 765 1666 314 6 6 chrUextra 23620217 23620842 -5383814 - GTWIN_I LTR Gypsy -2779 3642 3018 1 765 5059 32 5 0 chrUextra 23620942 23621592 -5383064 - Gypsy2_I LTR Gypsy -1694 5318 4097 1 765 5276 28 12 0 chrUextra 23621692 23622342 -5382314 - R1_DM LINE R1 -3232 2124 1467 1 765 2840 169 25 6 chrUextra 23622442 23623081 -5381575 + SAR_DM Satellite Satellite 387 1037 -435 1 765 2956 168 15 9 chrUextra 23623192 23623842 -5380814 + SAR_DM Satellite Satellite 384 1037 -435 1 765 5680 0 3 0 chrUextra 23623942 23624592 -5380064 - LSU-rRNA_Dme rRNA rRNA -296 3604 2953 1 765 2691 27 0 3 chrUextra 23625442 23625773 -5378883 - FW_DM LINE Jockey -3963 729 400 1 765 2718 9 0 0 chrUextra 23625773 23626092 -5378564 + STALKER4_LTR LTR Gypsy 1 319 -83 1 765 2849 193 12 19 chrUextra 23626195 23626842 -5377814 - SAR_DM Satellite Satellite -615 642 1 1 765 5630 0 3 1 chrUextra 23626942 23627592 -5377064 - SSU-rRNA_Dme rRNA rRNA -68 1927 1277 1 765 5400 9 0 9 chrUextra 23627692 23628342 -5376314 + Invader3_I LTR Gypsy 3759 4402 -486 1 765 5206 29 6 0 chrUextra 23628442 23629092 -5375564 + R1_DM LINE R1 2653 3306 -2050 1 765 2519 196 20 25 chrUextra 23629192 23629841 -5374815 + SAR_DM Satellite Satellite 1 645 -208 1 765 23 68 0 0 chrUextra 23630266 23630310 -5374346 + AT_rich Low_complexity Low_complexity 1 44 0 1 765 26 30 0 0 chrUextra 23630356 23630389 -5374267 + AT_rich Low_complexity Low_complexity 1 33 0 1 765 5353 6 48 0 chrUextra 23630692 23631342 -5373314 + DOC2_DM LINE Jockey 2578 3258 -1535 1 765 1161 315 11 35 chrUextra 23632244 23632793 -5371863 - Gypsy6_I LTR Gypsy -4569 2443 1908 1 765 417 0 37 0 chrUextra 23632942 23632996 -5371660 - NTS_DM Other Other -184 56 1 1 765 1820 4 17 17 chrUextra 23632996 23633236 -5371420 - NTS_DM Other Other 0 240 1 1 765 1678 34 17 17 chrUextra 23633236 23633476 -5371180 - NTS_DM Other Other 0 240 1 1 765 674 27 35 35 chrUextra 23633476 23633592 -5371064 - NTS_DM Other Other 0 240 125 1 765 2542 207 12 21 chrUextra 23633692 23634342 -5370314 - SAR_DM Satellite Satellite -674 644 1 1 765 3162 128 21 36 chrUextra 23634442 23635048 -5369608 - TART LINE telomeric -7048 7429 6833 1 765 2926 174 8 9 chrUextra 23635192 23635841 -5368815 + SAR_DM Satellite Satellite 256 903 -569 1 765 4582 2 4 0 chrUextra 23635942 23636470 -5368186 - SSU-rRNA_Dme rRNA rRNA -1465 530 1 1 765 1222 0 14 0 chrUextra 23636692 23636839 -5367817 + SSU-rRNA_Dme rRNA rRNA 1847 1995 0 1 765 21 89 0 0 chrUextra 23636858 23636914 -5367742 + AT_rich Low_complexity Low_complexity 1 56 0 1 765 467 17 17 0 chrUextra 23637282 23637342 -5367314 + SSU-rRNA_Dme rRNA rRNA 957 1017 -978 1 765 5724 1 0 0 chrUextra 23637442 23638092 -5366564 + LSU-rRNA_Dme rRNA rRNA 2983 3632 -268 1 765 2292 25 0 0 chrUextra 23638192 23638467 -5366189 + PROTOP DNA P 6 280 -4200 1 765 2632 19 3 29 chrUextra 23638466 23638842 -5365814 + PROTOP DNA P 388 753 -3727 1 765 5256 6 0 0 chrUextra 23638942 23639592 -5365064 + DM176_I LTR Gypsy 1174 1823 -4597 1 765 4726 40 11 31 chrUextra 23639692 23640342 -5364314 - BATUMI_I LTR Pao -5247 2716 2080 1 765 2326 193 31 9 chrUextra 23640442 23641092 -5363564 + SAR_DM Satellite Satellite 1 663 -396 1 765 856 0 0 0 chrUextra 23641192 23641292 -5363364 + Invader2_LTR LTR Gypsy 167 266 0 1 765 4233 14 22 0 chrUextra 23641292 23641842 -5362814 + Invader2_I LTR Gypsy 1 562 -4030 1 765 579 133 0 0 chrUextra 23641942 23642047 -5362609 - ARS406_DM Unknown Unknown -248 105 1 1 765 2530 183 7 8 chrUextra 23641954 23642543 -5362113 + SAR_DM Satellite Satellite 195 782 -690 1 765 336 198 20 10 chrUextra 23642692 23642794 -5361862 + XDMR_DM Unknown Unknown 258 360 0 1 765 2600 179 6 21 chrUextra 23642710 23643342 -5361314 - SAR_DM Satellite Satellite -354 1118 496 1 765 5655 1 1 0 chrUextra 23643442 23644092 -5360564 - LSU-rRNA_Dme rRNA rRNA -1302 2598 1948 1 765 5632 1 0 1 chrUextra 23644192 23644842 -5359814 + LSU-rRNA_Dme rRNA rRNA 1901 2549 -1351 1 765 5227 0 2 2 chrUextra 23644992 23645592 -5359064 - LSU-rRNA_Dme rRNA rRNA 0 3900 3301 1 765 218 7 0 156 chrUextra 23645721 23645900 -5358756 + CT-rich Low_complexity Low_complexity 26 176 0 1 765 5321 26 0 0 chrUextra 23646442 23647092 -5357564 + R1_DM LINE R1 3168 3817 -1539 1 765 5668 0 1 1 chrUextra 23647192 23647842 -5356814 - LSU-rRNA_Dme rRNA rRNA -107 3793 3144 1 765 553 42 0 0 chrUextra 23647942 23648014 -5356642 + ARS406_DM Unknown Unknown 118 189 -164 1 765 3009 173 9 5 chrUextra 23647950 23648590 -5356066 - SAR_DM Satellite Satellite -593 879 237 1 765 1145 301 35 37 chrUextra 23649442 23650090 -5354566 - Gypsy6_I LTR Gypsy -4473 2539 1893 1 765 5332 21 0 1 chrUextra 23650192 23650842 -5353814 + NINJA_I LTR Pao 1294 1942 -4069 1 765 2638 181 10 10 chrUextra 23650942 23651562 -5353094 + SAR_DM Satellite Satellite 457 1076 -396 1 765 249 130 0 36 chrUextra 23651536 23651592 -5353064 - XDMR_DM Unknown Unknown -9 351 298 1 765 3035 169 6 8 chrUextra 23651696 23652342 -5352314 - SAR_DM Satellite Satellite -425 1047 403 1 765 2906 168 11 12 chrUextra 23652448 23653092 -5351564 - SAR_DM Satellite Satellite -396 1076 434 1 765 936 0 0 0 chrUextra 23653192 23653311 -5351345 - DM176_I LTR Gypsy -707 5713 5595 1 765 4420 2 0 0 chrUextra 23653310 23653842 -5350814 - DM176_I LTR Gypsy -1464 4956 4425 1 765 3541 267 11 25 chrUextra 23653948 23655342 -5349314 - SAR_DM Satellite Satellite -425 1374 1 1 765 5219 22 1 0 chrUextra 23655442 23656091 -5348565 + STALKER4_I LTR Gypsy 2241 2890 -3640 1 765 5540 1 20 0 chrUextra 23656191 23656840 -5347816 - Gypsy4_I LTR Gypsy -3909 2379 1718 1 765 2962 168 14 8 chrUextra 23657689 23658336 -5346320 - SAR_DM Satellite Satellite -470 1002 352 1 765 2974 163 13 9 chrUextra 23658451 23659087 -5345569 + SAR_DM Satellite Satellite 369 1006 -466 1 765 2873 182 8 8 chrUextra 23659187 23659836 -5344820 + SAR_DM Satellite Satellite 267 915 -557 1 765 2912 24 0 5 chrUextra 23659936 23660319 -5344337 + Invader2_I LTR Gypsy 3011 3391 -1201 1 765 2072 27 0 19 chrUextra 23660317 23660585 -5344071 + Invader2_I LTR Gypsy 2868 3130 -1462 1 765 1623 89 0 0 chrUextra 23660685 23660910 -5343746 + BS3_DM LINE Jockey 197 421 -1369 1 765 3115 68 12 0 chrUextra 23660910 23661334 -5343322 + BS3_DM LINE Jockey 526 954 -836 1 765 5547 3 0 0 chrUextra 23661434 23662083 -5342573 - R1_DM LINE R1 -2181 3175 2527 1 765 689 206 0 7 chrUextra 23662225 23662367 -5342289 - HETRP_DM Satellite Satellite -203 1669 1529 1 765 664 206 0 7 chrUextra 23662534 23662676 -5341980 - HETRP_DM Satellite Satellite -203 1669 1529 1 765 3377 75 102 0 chrUextra 23662932 23663453 -5341203 - R1-2_DM LINE R1 -2589 627 54 1 765 5525 0 3 0 chrUextra 23663681 23664330 -5340326 + R1_DM LINE R1 2639 3289 -2067 1 765 1041 95 0 2 chrUextra 23664431 23664880 -5339776 + (CAAGA)n Simple_repeat Simple_repeat 1 448 0 1 765 1044 96 0 0 chrUextra 23664887 23665064 -5339592 + (ACTAG)n Simple_repeat Simple_repeat 1 177 0 1 765 5401 17 1 0 chrUextra 23665179 23665828 -5338828 + Gypsy4_I LTR Gypsy 3971 4620 -1668 1 765 381 43 0 0 chrUextra 23666530 23666577 -5338079 + (GAGAA)n Simple_repeat Simple_repeat 1 47 0 1 765 2255 122 2 42 chrUextra 23666677 23667303 -5337353 - DMSAT6 Satellite Satellite -50 600 1 1 765 5394 22 0 0 chrUextra 23667426 23668075 -5336581 + ROO_I LTR Pao 2164 2812 -5444 1 765 2314 88 3 39 chrUextra 23668937 23669573 -5335083 + DMSAT6 Satellite Satellite 1 612 0 1 765 1410 69 5 5 chrUextra 23669677 23669880 -5334776 - BATUMI_I LTR Pao -7760 203 1 1 765 2203 25 0 27 chrUextra 23669880 23670171 -5334485 - BATUMI_I LTR Pao -679 7284 7002 1 765 385 0 0 37 chrUextra 23670171 23670225 -5334431 - BATUMI_I LTR Pao 0 7963 7912 1 765 813 57 24 16 chrUextra 23670197 23670322 -5334334 + BATUMI_I LTR Pao 6482 6607 -1356 1 765 5031 50 1 3 chrUextra 23670422 23671071 -5333585 - BATUMI_I LTR Pao -3760 4203 3556 1 765 225 19 0 36 chrUextra 23671171 23671227 -5333429 + HMSBEAGLE_I LTR Gypsy 743 796 -5733 1 765 974 29 52 12 chrUextra 23671227 23671399 -5333257 + (TTA)n Simple_repeat Simple_repeat 1 179 0 1 765 3520 0 7 2 chrUextra 23671399 23671820 -5332836 + HMSBEAGLE_I LTR Gypsy 969 1391 -5138 1 765 320 105 18 0 chrUextra 23672669 23672726 -5331930 - ARS406_DM Unknown Unknown -295 58 1 1 765 2878 176 14 5 chrUextra 23672686 23673314 -5331342 + SAR_DM Satellite Satellite 246 879 -593 1 765 5124 39 26 0 chrUextra 23673418 23674067 -5330589 - DMCR1A LINE CR1 -2663 1807 1142 1 765 4964 16 43 2 chrUextra 23674189 23674815 -5329841 + PROTOP_A DNA P 1 652 -453 1 765 2739 182 8 11 chrUextra 23674932 23675565 -5329091 + SAR_DM Satellite Satellite 371 1001 -471 1 765 5591 0 1 3 chrUextra 23675665 23676314 -5328342 - SSU-rRNA_Dme rRNA rRNA -798 1197 550 1 765 2617 171 8 30 chrUextra 23676417 23677054 -5327602 + SAR_DM Satellite Satellite 496 1118 -354 1 765 268 129 15 46 chrUextra 23676997 23677062 -5327594 - XDMR Unknown Unknown 0 361 299 1 765 3740 2 0 0 chrUextra 23677163 23677591 -5327065 - LSU-rRNA_Dme rRNA rRNA -1685 2215 1788 1 765 1417 6 11 6 chrUextra 23677635 23677812 -5326844 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1611 1 765 2293 0 4 4 chrUextra 23677912 23678181 -5326475 - LSU-rRNA_Dme rRNA rRNA -1844 2056 1788 1 765 2822 0 6 3 chrUextra 23678225 23678561 -5326095 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1452 1 765 3328 116 23 0 chrUextra 23678661 23679310 -5325346 - DM297_I LTR Gypsy -2702 3410 2724 1 765 2745 181 11 8 chrUextra 23679417 23680057 -5324599 - SAR_DM Satellite Satellite -577 895 254 1 765 2592 193 9 19 chrUextra 23680159 23680807 -5323849 + SAR_DM Satellite Satellite 462 1103 -369 1 765 394 0 0 0 chrUextra 23680908 23680955 -5323701 + R1_DM LINE R1 5310 5356 0 1 765 4775 0 0 4 chrUextra 23680967 23681524 -5323132 + R1_DM LINE R1 4802 5356 0 1 765 282 29 0 0 chrUextra 23681522 23681557 -5323099 + LSU-rRNA_Dme rRNA rRNA 2640 2674 -1226 1 765 2558 186 26 11 chrUextra 23681659 23682306 -5322350 + SAR_DM Satellite Satellite 190 846 -626 1 765 2800 156 14 42 chrUextra 23682410 23683053 -5321603 - SAR_DM Satellite Satellite -602 870 246 1 765 414 113 0 0 chrUextra 23683157 23683228 -5321428 - ARS406_DM Unknown Unknown -282 71 1 1 765 2696 175 10 10 chrUextra 23683188 23683801 -5320855 + SAR_DM Satellite Satellite 246 858 -614 1 765 1755 83 0 4 chrUextra 23683904 23684147 -5320509 + Gypsy12_I LTR Gypsy 5305 5546 0 1 765 1538 203 23 26 chrUextra 23684146 23684530 -5320126 + Gypsy12_LTR LTR Gypsy 1 383 -1953 1 765 2880 169 14 9 chrUextra 23684654 23685289 -5319367 - SAR_DM Satellite Satellite -466 1006 369 1 765 429 20 0 0 chrUextra 23685402 23685452 -5319204 + (CAAGA)n Simple_repeat Simple_repeat 5 54 0 1 765 1909 107 106 3 chrUextra 23686418 23686757 -5317899 + Invader1_I LTR Gypsy 2718 3091 -95 1 765 5494 1 5 3 chrUextra 23686900 23687549 -5317107 + LSU-rRNA_Dme rRNA rRNA 1056 1705 -2195 1 765 5292 11 1 5 chrUextra 23687649 23688298 -5316358 + R1_DM LINE R1 3391 4037 -1319 1 765 4958 40 35 0 chrUextra 23688398 23689047 -5315609 + MAX_I LTR Pao 4453 5124 -2790 1 765 2926 170 14 9 chrUextra 23689147 23689795 -5314861 - SAR_DM Satellite Satellite -470 1002 352 1 765 4396 27 9 0 chrUextra 23689896 23690458 -5314198 + PROTOP DNA P 732 1298 -3182 1 765 597 22 44 0 chrUextra 23690455 23690545 -5314111 + PROTOP DNA P 3772 3865 -615 1 765 1666 5 0 0 chrUextra 23690645 23690836 -5313820 - LSU-rRNA_Dme rRNA rRNA -1070 2830 2640 1 765 3935 7 0 0 chrUextra 23690834 23691294 -5313362 - R1_DM LINE R1 0 5356 4897 1 765 934 35 0 0 chrUextra 23691436 23691550 -5313106 - R1_DM LINE R1 0 5356 5243 1 765 4072 22 2 0 chrUextra 23691547 23692043 -5312613 - R1_DM LINE R1 -290 5066 4570 1 765 2834 170 9 11 chrUextra 23692143 23692786 -5311870 + SAR_DM Satellite Satellite 296 937 -535 1 765 25 48 0 46 chrUextra 23692953 23693018 -5311638 + AT_rich Low_complexity Low_complexity 1 62 0 1 765 5093 36 12 5 chrUextra 23693641 23694289 -5310367 - MAX_I LTR Pao -4634 3280 2628 1 765 5439 19 0 0 chrUextra 23694390 23695039 -5309617 + R1_DM LINE R1 1915 2563 -2793 1 765 1199 0 0 0 chrUextra 23695139 23695276 -5309380 + LSU-rRNA_Dme rRNA rRNA 3764 3900 0 1 765 22 56 0 0 chrUextra 23695348 23695384 -5309272 + AT_rich Low_complexity Low_complexity 1 36 0 1 765 246 150 0 0 chrUextra 23695389 23695429 -5309227 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 765 246 150 0 0 chrUextra 23695481 23695521 -5309135 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 765 246 150 0 0 chrUextra 23695573 23695613 -5309043 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 765 230 150 0 0 chrUextra 23695656 23695696 -5308960 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 765 22 56 0 0 chrUextra 23695709 23695745 -5308911 + AT_rich Low_complexity Low_complexity 1 36 0 1 765 5195 20 0 3 chrUextra 23695888 23696537 -5308119 + NINJA_I LTR Pao 305 951 -5060 1 765 5419 20 0 0 chrUextra 23696637 23697286 -5307370 - R1_DM LINE R1 -1586 3770 3122 1 765 246 150 0 0 chrUextra 23697433 23697473 -5307183 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 765 246 150 0 0 chrUextra 23697525 23697565 -5307091 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 765 255 125 0 0 chrUextra 23697608 23697648 -5307008 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 765 22 56 0 0 chrUextra 23697661 23697697 -5306959 + AT_rich Low_complexity Low_complexity 1 36 0 1 765 870 9 0 27 chrUextra 23697723 23697835 -5306821 + NTS_DM Other Other 25 133 -107 1 765 1212 30 0 6 chrUextra 23697835 23698000 -5306656 + NTS_DM Other Other 38 201 -39 1 765 2707 161 22 34 chrUextra 23698139 23698784 -5305872 - SAR_DM Satellite Satellite -396 1076 440 1 765 2824 173 25 9 chrUextra 23698884 23699533 -5305123 + SAR_DM Satellite Satellite 415 1073 -399 1 765 2390 102 9 23 chrUextra 23699633 23700282 -5304374 + DMSAT6 Satellite Satellite 1 640 -119 1 765 2759 167 11 22 chrUextra 23701136 23701780 -5302876 + SAR_DM Satellite Satellite 332 968 -504 1 765 849 0 32 24 chrUextra 23701880 23702005 -5302651 + NTS_DM Other Other 115 240 0 1 765 1817 4 17 17 chrUextra 23702005 23702245 -5302411 + NTS_DM Other Other 1 240 0 1 765 1290 6 0 18 chrUextra 23702245 23702410 -5302246 + NTS_DM Other Other 1 162 -78 1 765 244 128 0 21 chrUextra 23702829 23702877 -5301779 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 765 351 49 65 16 chrUextra 23702899 23702961 -5301695 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 765 897 173 102 15 chrUextra 23702960 23703165 -5301491 - DMLTR5 LTR Gypsy 0 266 44 1 765 4581 63 1 23 chrUextra 23703378 23704027 -5300629 + R1_DM LINE R1 35 669 -4687 1 765 1620 0 0 0 chrUextra 23704136 23704316 -5300340 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 765 399 157 0 0 chrUextra 23704316 23704386 -5300270 + T-rich Low_complexity Low_complexity 1 70 0 1 765 1180 89 0 11 chrUextra 23704386 23704482 -5300174 + (TTTTC)n Simple_repeat Simple_repeat 1 95 0 1 765 1263 94 0 0 chrUextra 23704482 23704662 -5299994 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 765 1180 89 0 11 chrUextra 23704662 23704747 -5299909 + (TTTTC)n Simple_repeat Simple_repeat 1 85 0 1 765 1026 0 0 0 chrUextra 23705411 23705525 -5299131 + (TCTTG)n Simple_repeat Simple_repeat 5 118 0 1 765 2502 197 34 24 chrUextra 23705631 23706274 -5298382 + SAR_DM Satellite Satellite 1 649 -208 1 765 5622 5 0 0 chrUextra 23706374 23707023 -5297633 + LSU-rRNA_Dme rRNA rRNA 1886 2534 -1366 1 765 4125 8 0 0 chrUextra 23707123 23707611 -5297045 + PROTOP_A DNA P 618 1105 0 1 765 1136 90 12 0 chrUextra 23707611 23707765 -5296891 + DOC3_DM LINE Jockey 1740 1895 -2845 1 765 1158 13 6 67 chrUextra 23707872 23708037 -5296619 - Gypsy4_LTR LTR Gypsy -132 155 1 1 765 1308 107 71 158 chrUextra 23708144 23708466 -5296190 + HOBO DNA hAT 23 316 -2700 1 765 2200 130 12 17 chrUextra 23708621 23709270 -5295386 - DMSAT6 Satellite Satellite -156 646 1 1 765 744 71 32 0 chrUextra 23709519 23709645 -5295011 + PROTOP DNA P 617 746 -3734 1 765 1676 25 0 5 chrUextra 23709649 23709853 -5294803 + PROTOP DNA P 4278 4480 0 1 765 1648 290 14 14 chrUextra 23710119 23710762 -5293894 - G6_DM LINE Jockey -1001 1041 399 1 765 511 290 0 0 chrUextra 23711156 23711332 -5293324 - Copia2_I LTR Copia -97 4065 3890 1 765 598 275 0 0 chrUextra 23711330 23711508 -5293148 - Copia2_I LTR Copia -1373 2789 2612 1 765 1198 48 124 0 chrUextra 23711618 23711827 -5292829 - PROTOP_B DNA P -399 754 520 1 765 1727 58 0 0 chrUextra 23711814 23712040 -5292616 - PROTOP_B DNA P -856 297 73 1 765 186 43 0 0 chrUextra 23712240 23712263 -5292393 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1 765 1127 7 7 0 chrUextra 23712366 23712503 -5292153 + R2_DM LINE R2 3470 3607 0 1 765 455 36 0 0 chrUextra 23712504 23712559 -5292097 + LSU-rRNA_Dme rRNA rRNA 2578 2632 -1268 1 765 3880 2 4 2 chrUextra 23712559 23713015 -5291641 + R1_DM LINE R1 1 457 -4899 1 765 2609 170 50 22 chrUextra 23713115 23713754 -5290902 + SAR_DM Satellite Satellite 281 937 -535 1 765 2559 47 27 31 chrUextra 23714613 23715262 -5289394 + DM176_I LTR Gypsy 239 825 -5595 1 765 2326 261 2 2 chrUextra 23715370 23716011 -5288645 + HMSBEAGLE_I LTR Gypsy 3109 3749 -2780 1 765 246 150 0 0 chrUextra 23716226 23716266 -5288390 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 765 246 150 0 0 chrUextra 23716318 23716358 -5288298 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 765 255 125 0 0 chrUextra 23716401 23716441 -5288215 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 765 22 56 0 0 chrUextra 23716454 23716490 -5288166 + AT_rich Low_complexity Low_complexity 1 36 0 1 765 870 9 0 27 chrUextra 23716516 23716628 -5288028 + NTS_DM Other Other 25 133 -107 1 765 980 23 0 8 chrUextra 23716628 23716760 -5287896 + NTS_DM Other Other 38 168 -72 1 765 5252 22 5 0 chrUextra 23717609 23718252 -5286404 - Gypsy4_I LTR Gypsy -5138 1150 505 1 765 2476 117 129 6 chrUextra 23718358 23719000 -5285656 + TART LINE telomeric 7168 7678 -6799 1 765 771 278 41 35 chrUextra 23719107 23719621 -5285035 + SAR_DM Satellite Satellite 346 1216 -256 1 765 287 261 46 8 chrUextra 23719625 23719652 -5285004 - XDMR_DM Unknown Unknown -211 149 14 1 765 306 269 19 0 chrUextra 23719652 23719756 -5284900 + SAR_DM Satellite Satellite 566 671 -801 1 765 2931 168 11 9 chrUextra 23719861 23720505 -5284151 - SAR_DM Satellite Satellite -416 1056 412 1 765 5116 39 29 1 chrUextra 23721354 23722002 -5282654 + BATUMI_I LTR Pao 4986 5651 -2312 1 765 3891 47 44 9 chrUextra 23722103 23722752 -5281904 - PROTOP DNA P -3727 753 153 1 765 2255 111 31 24 chrUextra 23723079 23723495 -5281161 - Stalker2_I LTR Gypsy -6509 893 475 1 95 2516 199 4 14 chrUextra 23723601 23724208 -5280448 - SAR_DM Satellite Satellite -1093 600 1 1 766 263 54 0 0 chrUextra 23724213 23724250 -5280406 + ARS406_DM Unknown Unknown 90 126 -227 1 766 2837 184 9 8 chrUextra 23724350 23724998 -5279658 - SAR_DM Satellite Satellite -484 988 340 1 766 5483 0 5 1 chrUextra 23725099 23725748 -5278908 + R1_DM LINE R1 1091 1741 -3615 1 766 1945 283 12 8 chrUextra 23725857 23726497 -5278159 - ROVER-I_DM LTR Gypsy -4999 1585 943 1 766 2826 170 13 8 chrUextra 23726602 23727237 -5277419 + SAR_DM Satellite Satellite 321 958 -514 1 766 1314 0 0 0 chrUextra 23727346 23727496 -5277160 + LSU-rRNA_Dme rRNA rRNA 2611 2760 -1140 1 766 4315 6 2 2 chrUextra 23727492 23727995 -5276661 + R2_DM LINE R2 3 505 -3102 1 766 340 176 15 0 chrUextra 23728097 23728165 -5276491 + HETRP_DM Satellite Satellite 1601 1669 -203 1 766 612 199 6 50 chrUextra 23728281 23728440 -5276216 + HETRP_DM Satellite Satellite 1518 1669 -203 1 766 641 193 7 14 chrUextra 23728573 23728715 -5275941 + HETRP_DM Satellite Satellite 1529 1669 -203 1 766 3791 0 0 0 chrUextra 23728844 23729288 -5275368 - ACCORD_I LTR Gypsy -5844 444 1 1 766 1770 0 0 0 chrUextra 23729288 23729493 -5275163 - ACCORD_LTR LTR Gypsy 0 558 354 1 766 1703 21 17 17 chrUextra 23729593 23729830 -5274826 + NTS_DM Other Other 4 240 0 1 766 1756 17 17 17 chrUextra 23729830 23730070 -5274586 + NTS_DM Other Other 1 240 0 1 766 1411 12 0 0 chrUextra 23730070 23730242 -5274414 + NTS_DM Other Other 1 172 -68 1 766 873 0 0 0 chrUextra 23730342 23730439 -5274217 + (TATTG)n Simple_repeat Simple_repeat 4 100 0 1 766 2681 164 14 43 chrUextra 23731092 23731740 -5272916 + SAR_DM Satellite Satellite 195 823 -649 1 766 1733 206 48 26 chrUextra 23731851 23732310 -5272346 - Gypsy12_LTR LTR Gypsy -1867 469 1 1 766 1341 67 0 0 chrUextra 23732310 23732489 -5272167 - Gypsy12_I LTR Gypsy 0 5546 5368 1 766 3437 184 1 1 chrUextra 23732589 23733238 -5271418 - ROVER-I_DM LTR Gypsy -3209 3375 2727 1 766 34 24 0 0 chrUextra 23733852 23733893 -5270763 + AT_rich Low_complexity Low_complexity 1 41 0 1 766 361 114 89 0 chrUextra 23733906 23733985 -5270671 - TART LINE telomeric -3988 10489 10404 1 766 5551 3 11 0 chrUextra 23734087 23734736 -5269920 - Gypsy6_I LTR Gypsy -2832 4180 3525 1 766 1548 176 11 6 chrUextra 23734836 23735485 -5269171 + SAR_DM Satellite Satellite 1 651 -677 1 766 2538 175 35 10 chrUextra 23735585 23736213 -5268443 + SAR_DM Satellite Satellite 209 852 -620 1 766 480 253 41 6 chrUextra 23736060 23736231 -5268425 - XDMR_DM Unknown Unknown -7 353 177 1 766 35 24 0 0 chrUextra 23736597 23736639 -5268017 + AT_rich Low_complexity Low_complexity 1 42 0 1 766 21 95 0 0 chrUextra 23736853 23736916 -5267740 + AT_rich Low_complexity Low_complexity 1 63 0 1 766 459 0 0 0 chrUextra 23736928 23736983 -5267673 + LSU-rRNA_Dme rRNA rRNA 1 55 -3845 1 766 2219 98 5 36 chrUextra 23737083 23737729 -5266927 + DMSAT6 Satellite Satellite 1 625 -3 1 766 5272 31 0 0 chrUextra 23737832 23738481 -5266175 - R1_DM LINE R1 -2435 2921 2273 1 766 2783 183 6 8 chrUextra 23738590 23739230 -5265426 - SAR_DM Satellite Satellite -396 1076 438 1 766 5245 8 0 1 chrUextra 23739332 23739979 -5264677 + Invader2_I LTR Gypsy 3757 4402 -190 1 766 5499 8 1 0 chrUextra 23740079 23740728 -5263928 - DM176_I LTR Gypsy -5192 1228 579 1 766 1120 273 34 30 chrUextra 23740832 23741476 -5263180 - SAR_DM Satellite Satellite -256 1216 235 1 766 834 10 0 0 chrUextra 23741583 23741684 -5262972 - R2_DM LINE R2 -3506 101 1 1 766 4578 7 0 0 chrUextra 23741683 23742225 -5262431 - R1_DM LINE R1 -2403 2953 2412 1 766 2783 173 19 17 chrUextra 23742325 23742972 -5261684 - SAR_DM Satellite Satellite -405 1067 420 1 766 5417 11 0 0 chrUextra 23743073 23743721 -5260935 + BLOOD_I LTR Gypsy 1833 2480 -4133 1 766 3661 5 7 2 chrUextra 23743823 23744263 -5260393 + LSU-rRNA_Dme rRNA rRNA 1347 1788 -2112 1 766 1427 0 0 0 chrUextra 23744307 23744469 -5260187 + LSU-rRNA_Dme rRNA rRNA 1788 1949 -1951 1 766 3821 9 0 0 chrUextra 23744569 23745033 -5259623 - R1_DM LINE R1 -4378 978 515 1 766 1617 0 11 0 chrUextra 23745030 23745217 -5259439 - LSU-rRNA_Dme rRNA rRNA -1252 2648 2460 1 766 690 232 134 0 chrUextra 23745741 23745965 -5258691 - LINEJ1_DM LINE Jockey -213 4807 4554 1 766 446 39 52 0 chrUextra 23746065 23746142 -5258514 + (TA)n Simple_repeat Simple_repeat 1 81 0 1 766 248 133 22 0 chrUextra 23746221 23746266 -5258390 + DM176_LTR LTR Gypsy 224 269 -238 1 766 254 190 17 0 chrUextra 23746387 23746445 -5258211 + DM176_LTR LTR Gypsy 308 366 -141 1 766 571 148 40 16 chrUextra 23746462 23746586 -5258070 + DMTOM1_LTR LTR Gypsy 284 410 0 1 766 391 113 0 27 chrUextra 23746586 23746650 -5258006 + DMTOM1_LTR LTR Gypsy 349 410 0 1 766 4251 21 2 0 chrUextra 23746813 23747330 -5257326 + R1_DM LINE R1 4549 5066 -290 1 766 904 35 0 9 chrUextra 23747327 23747442 -5257214 + R1_DM LINE R1 5243 5356 0 1 766 4393 52 65 9 chrUextra 23747561 23748205 -5256451 + R1_DM LINE R1 391 1070 -4286 1 766 5523 3 11 1 chrUextra 23748309 23748957 -5255699 - TART LINE telomeric -10945 3532 2879 1 766 5187 22 1 12 chrUextra 23749057 23749705 -5254951 - R1_DM LINE R1 -1863 3493 2853 1 766 1983 0 0 4 chrUextra 23749805 23750034 -5254622 + SSU-rRNA_Dme rRNA rRNA 1768 1995 0 1 766 21 89 0 0 chrUextra 23750053 23750109 -5254547 + AT_rich Low_complexity Low_complexity 1 56 0 1 766 4714 40 1 25 chrUextra 23750553 23751201 -5253455 - BATUMI_I LTR Pao -4620 3343 2711 1 766 23 50 0 48 chrUextra 23751780 23751843 -5252813 + AT_rich Low_complexity Low_complexity 1 60 0 1 766 2607 173 33 9 chrUextra 23752066 23752696 -5251960 - SAR_DM Satellite Satellite -396 1076 432 1 766 2694 169 31 16 chrUextra 23752797 23753444 -5251212 + SAR_DM Satellite Satellite 239 895 -577 1 766 254 0 0 0 chrUextra 23753545 23753578 -5251078 + Copia2_I LTR Copia 1842 1874 -2288 1 766 260 116 25 127 chrUextra 23754021 23754100 -5250556 + TIRANT_I LTR Gypsy 1 71 -7621 1 766 5382 25 0 1 chrUextra 23754293 23754940 -5249716 + DIVER_I LTR Pao 2088 2733 -2910 1 766 5497 9 0 0 chrUextra 23755041 23755689 -5248967 + R1_DM LINE R1 4566 5213 -143 1 766 5556 0 1 5 chrUextra 23755789 23756437 -5248219 + SSU-rRNA_Dme rRNA rRNA 1019 1664 -331 1 766 5189 16 20 0 chrUextra 23756538 23757185 -5247471 + LSU-rRNA_Dme rRNA rRNA 264 923 -2977 1 766 1041 97 0 2 chrUextra 23757285 23757932 -5246724 + (CAAGA)n Simple_repeat Simple_repeat 1 645 0 1 766 2089 209 82 29 chrUextra 23758033 23758675 -5245981 + SAR_DM Satellite Satellite 1 675 -216 1 766 2524 189 10 8 chrUextra 23758781 23759404 -5245252 - SAR_DM Satellite Satellite -669 803 180 1 766 834 92 0 0 chrUextra 23759298 23759429 -5245227 + ARS406_DM Unknown Unknown 1 131 -222 1 766 2560 9 28 0 chrUextra 23759529 23759850 -5244806 + Invader3_I LTR Gypsy 4559 4888 0 1 766 1605 89 6 110 chrUextra 23759850 23760177 -5244479 + Invader3_LTR LTR Gypsy 1 293 -5 1 766 1620 0 0 4 chrUextra 23760282 23760515 -5244141 + (CAAGA)n Simple_repeat Simple_repeat 1 231 0 1 766 2575 196 19 9 chrUextra 23761025 23761665 -5242991 + SAR_DM Satellite Satellite 430 1075 -397 1 766 2344 88 144 56 chrUextra 23761773 23762253 -5242403 + MAX_I LTR Pao 46 567 -7347 1 766 4648 0 0 0 chrUextra 23762637 23763169 -5241487 + DMRT1B LINE R1 1 532 -4651 1 766 2883 189 10 18 chrUextra 23763269 23763911 -5240745 - ROVER-I_DM LTR Gypsy -2546 4038 3485 1 766 5477 6 0 0 chrUextra 23764017 23764665 -5239991 - ROO_I LTR Pao -6088 2168 1521 1 766 5548 5 1 0 chrUextra 23764765 23765413 -5239243 - R1_DM LINE R1 -361 4995 4347 1 766 5136 23 3 3 chrUextra 23765513 23766161 -5238495 + NINJA_I LTR Pao 4060 4707 -1304 1 766 1620 13 0 0 chrUextra 23766264 23766569 -5238087 + (TTATA)n Simple_repeat Simple_repeat 1 305 0 1 766 2437 6 0 38 chrUextra 23766569 23766909 -5237747 - DOC LINE Jockey -5 4720 4394 1 766 4660 45 11 6 chrUextra 23767009 23767657 -5236999 + IDEFIX_I LTR Gypsy 3113 3763 -1865 1 766 1089 289 27 31 chrUextra 23767768 23768391 -5236265 - SAR_DM Satellite Satellite -640 620 1 1 766 1019 286 36 31 chrUextra 23769259 23769862 -5234794 - SAR_DM Satellite Satellite -439 1033 428 1 766 5561 3 0 0 chrUextra 23770001 23770649 -5234007 + R1_DM LINE R1 2870 3517 -1839 1 766 5673 0 1 0 chrUextra 23770749 23771397 -5233259 - LSU-rRNA_Dme rRNA rRNA -475 3425 2777 1 766 49 43 0 0 chrUextra 23771755 23771825 -5232831 + AT_rich Low_complexity Low_complexity 1 70 0 1 766 4929 45 22 0 chrUextra 23772245 23772893 -5231763 + IDEFIX_I LTR Gypsy 1701 2362 -3266 1 766 2267 0 0 4 chrUextra 23773008 23773285 -5231371 + Copia_LTR LTR Copia 1 276 0 1 766 2999 6 3 0 chrUextra 23773285 23773641 -5231015 + Copia_I LTR Copia 1 357 -4236 1 766 5241 20 0 1 chrUextra 23773741 23774389 -5230267 - DMRT1A LINE R1 -3890 1293 647 1 766 239 19 0 153 chrUextra 23775010 23775134 -5229522 + (GATTG)n Simple_repeat Simple_repeat 3 107 0 1 766 375 107 0 0 chrUextra 23775985 23776041 -5228615 + TART LINE telomeric 3974 4029 -10448 1 766 1925 143 59 39 chrUextra 23776012 23776614 -5228042 + TART LINE telomeric 4698 5239 -9238 1 766 2560 158 17 6 chrUextra 23776735 23777264 -5227392 + SAR_DM Satellite Satellite 369 903 -569 1 766 751 64 0 0 chrUextra 23777271 23777380 -5227276 - ARS406_DM Unknown Unknown -195 158 50 1 766 34 24 0 0 chrUextra 23777591 23777632 -5227024 + AT_rich Low_complexity Low_complexity 1 41 0 1 766 2745 65 6 6 chrUextra 23778229 23778588 -5226068 - R1_DM LINE R1 -4997 359 1 1 766 2310 8 0 0 chrUextra 23778621 23778877 -5225779 - R1_DM LINE R1 0 5356 5101 1 766 302 219 27 14 chrUextra 23778997 23779071 -5225585 + HETRP_DM Satellite Satellite 1601 1675 -197 1 766 294 29 0 0 chrUextra 23779197 23779232 -5225424 + (GA)n Simple_repeat Simple_repeat 2 36 0 1 766 505 209 8 17 chrUextra 23779232 23779349 -5225307 + HETRP_DM Satellite Satellite 1549 1664 -208 1 766 543 204 0 9 chrUextra 23779516 23779625 -5225031 + HETRP_DM Satellite Satellite 1529 1636 -236 1 766 1357 67 6 0 chrUextra 23779732 23779910 -5224746 - R1_DM LINE R1 -5177 179 1 1 766 3734 16 9 0 chrUextra 23779943 23780373 -5224283 - R1_DM LINE R1 0 5356 4923 1 766 2846 36 72 3 chrUextra 23780739 23780874 -5223782 + DMRT1B LINE R1 1 141 -5042 1 766 180 0 0 0 chrUextra 23780874 23780894 -5223762 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 1 766 2846 36 72 3 chrUextra 23780894 23781121 -5223535 + DMRT1B LINE R1 142 386 -4797 1 766 3877 2 0 2 chrUextra 23781339 23781768 -5222888 - ROO_LTR LTR Pao 0 428 1 1 766 884 0 0 0 chrUextra 23781768 23781869 -5222787 - ROO_I LTR Pao 0 8256 8156 1 766 582 309 0 6 chrUextra 23781977 23782159 -5222497 + Invader6_I LTR Gypsy 2861 3041 -1058 1 766 32 0 0 0 chrUextra 23782160 23782192 -5222464 + AT_rich Low_complexity Low_complexity 1 32 0 1 766 896 330 3 3 chrUextra 23782200 23782534 -5222122 + MICROPIA_I LTR Gypsy 3265 3598 -878 1 766 5705 12 6 0 chrUextra 23782717 23783365 -5221291 + DMRT1B LINE R1 4506 5157 -26 1 766 364 220 105 0 chrUextra 23783578 23784113 -5220543 + (CAAGA)n Simple_repeat Simple_repeat 1 591 0 1 766 344 211 106 0 chrUextra 23783878 23784039 -5220617 + A-rich Low_complexity Low_complexity 3 180 0 1 766 3556 140 29 8 chrUextra 23784214 23784861 -5219795 - TART LINE telomeric -4860 9617 8957 1 766 1895 191 5 6 chrUextra 23784964 23785608 -5219048 + SAR_DM Satellite Satellite 1 642 -558 1 766 5222 28 48 1 chrUextra 23785709 23786357 -5218299 - R1_DM LINE R1 -868 4488 3811 1 766 5409 14 0 0 chrUextra 23786457 23787105 -5217551 + QUASIMODO_I LTR Gypsy 4733 5380 -680 1 766 1770 189 14 5 chrUextra 23787207 23787853 -5216803 - SAR_DM Satellite Satellite -708 652 1 1 766 5242 11 11 1 chrUextra 23787953 23788601 -5216055 + DM176_I LTR Gypsy 918 1571 -4849 1 766 5208 9 52 0 chrUextra 23788701 23789349 -5215307 - DOC2_DM LINE Jockey -624 4169 3488 1 766 3166 171 11 6 chrUextra 23789449 23790097 -5214559 - SAR_DM Satellite Satellite -470 1002 352 1 766 520 245 0 0 chrUextra 23790252 23790584 -5214072 + (TAAA)n Simple_repeat Simple_repeat 1 332 0 1 766 279 125 236 0 chrUextra 23790555 23790843 -5213813 + (CTAAA)n Simple_repeat Simple_repeat 1 355 0 1 766 5856 1 0 0 chrUextra 23790945 23791593 -5213063 + R1_DM LINE R1 1339 1986 -3370 1 766 1617 218 74 55 chrUextra 23791698 23792341 -5212315 - SAR_DM Satellite Satellite -478 655 1 1 766 3026 172 11 9 chrUextra 23792441 23793079 -5211577 + SAR_DM Satellite Satellite 438 1076 -396 1 766 306 0 0 0 chrUextra 23793189 23793223 -5211433 + (TTCTC)n Simple_repeat Simple_repeat 2 35 0 1 766 1142 119 0 18 chrUextra 23793223 23793564 -5211092 + (CTATT)n Simple_repeat Simple_repeat 1 335 0 1 766 306 0 0 0 chrUextra 23793566 23793600 -5211056 + (TTCTC)n Simple_repeat Simple_repeat 2 35 0 1 766 989 58 7 18 chrUextra 23793960 23794545 -5210111 + RSP Satellite Satellite 1 578 0 1 766 850 135 0 0 chrUextra 23794809 23794935 -5209721 + HMSBEAGLE_I LTR Gypsy 6404 6529 0 1 766 1039 183 36 18 chrUextra 23795023 23795246 -5209410 + DMLTR5 LTR Gypsy 40 266 0 1 766 37 39 0 0 chrUextra 23795775 23795826 -5208830 + AT_rich Low_complexity Low_complexity 1 51 0 1 766 22 35 0 0 chrUextra 23795927 23795956 -5208700 + AT_rich Low_complexity Low_complexity 1 29 0 1 766 5721 20 0 0 chrUextra 23796181 23796829 -5207827 - MAX_I LTR Pao -3379 4535 3888 1 766 2818 181 11 19 chrUextra 23796929 23797577 -5207079 + SAR_DM Satellite Satellite 457 1099 -373 1 766 3032 20 0 3 chrUextra 23797688 23798045 -5206611 - MDG1_LTR LTR Gypsy 0 442 87 1 766 423 100 0 0 chrUextra 23798045 23798115 -5206541 + (TTA)n Simple_repeat Simple_repeat 3 72 0 1 766 241 0 0 0 chrUextra 23798425 23798452 -5206204 + DOC2_DM LINE Jockey 1261 1287 -3506 1 766 5402 17 8 2 chrUextra 23798439 23799073 -5205583 + DOC2_DM LINE Jockey 1667 2304 -2489 1 766 5354 0 17 6 chrUextra 23799173 23799821 -5204835 + MAX_I LTR Pao 584 1238 -6676 1 766 609 198 0 16 chrUextra 23799921 23800049 -5204607 - HETRP_DM Satellite Satellite -218 1654 1529 1 766 702 186 14 14 chrUextra 23800188 23800335 -5204321 - HETRP_DM Satellite Satellite -197 1675 1529 1 766 319 245 19 19 chrUextra 23800465 23800569 -5204087 - HETRP_DM Satellite Satellite -197 1675 1572 1 766 2433 181 6 9 chrUextra 23800669 23800687 -5203969 + SAR_DM Satellite Satellite 1 20 -1183 1 766 831 30 0 0 chrUextra 23800687 23800787 -5203869 - ARS406_DM Unknown Unknown -164 189 90 1 766 2433 181 6 9 chrUextra 23800787 23801317 -5203339 + SAR_DM Satellite Satellite 21 645 -558 1 766 5780 0 1 0 chrUextra 23801417 23802065 -5202591 + TABOR_I LTR Gypsy 247 895 -5441 1 766 557 22 0 193 chrUextra 23802165 23802276 -5202380 - BATUMI_I LTR Pao -873 7090 7002 1 766 4675 6 0 6 chrUextra 23802276 23802813 -5201843 - BATUMI_I LTR Pao 0 7963 7430 1 766 1472 185 22 6 chrUextra 23802913 23803560 -5201096 + SAR_DM Satellite Satellite 1 657 -749 1 766 3126 172 8 5 chrUextra 23803661 23804292 -5200364 - SAR_DM Satellite Satellite -594 878 246 1 766 346 266 39 24 chrUextra 23804182 23804309 -5200347 + XDMR Unknown Unknown 1 129 -232 1 766 3080 161 19 9 chrUextra 23804414 23805046 -5199610 - SAR_DM Satellite Satellite -514 958 321 1 766 1349 158 8 24 chrUextra 23805158 23805405 -5199251 - Gypsy12_LTR LTR Gypsy -2093 243 1 1 766 3083 75 10 2 chrUextra 23805404 23805803 -5198853 - Gypsy12_I LTR Gypsy 0 5546 5145 1 766 435 38 0 0 chrUextra 23806500 23806553 -5198103 + (GAGAA)n Simple_repeat Simple_repeat 1 53 0 1 766 1304 18 0 6 chrUextra 23806653 23806818 -5197838 - NTS_DM Other Other -39 201 38 1 766 883 18 0 27 chrUextra 23806818 23806930 -5197726 - NTS_DM Other Other -107 133 25 1 766 1274 18 0 12 chrUextra 23806982 23807148 -5197508 - NTS_DM Other Other -39 201 38 1 766 907 9 0 27 chrUextra 23807148 23807260 -5197396 - NTS_DM Other Other -107 133 25 1 766 3607 28 65 2 chrUextra 23807401 23808049 -5196607 + R1_DM LINE R1 3191 3879 -1477 1 766 1203 287 18 18 chrUextra 23808897 23809355 -5195301 - ROVER-I_DM LTR Gypsy -3535 3049 2592 1 766 1399 18 6 6 chrUextra 23809349 23809517 -5195139 + TLD3 Unknown Unknown 2 169 -3 1 766 392 271 96 6 chrUextra 23809655 23809833 -5194823 + DM176_I LTR Gypsy 5756 5949 -471 1 766 1010 147 127 49 chrUextra 23809821 23810129 -5194527 - STALKER4_I LTR Gypsy -5373 1157 826 1 766 734 186 36 0 chrUextra 23810126 23810293 -5194363 + DM297_I LTR Gypsy 4336 4508 -1659 1 766 5801 5 0 0 chrUextra 23810393 23811041 -5193615 + R1_DM LINE R1 2980 3627 -1729 1 766 959 19 0 0 chrUextra 23811141 23811249 -5193407 + 5S_DM RNA RNA 28 135 0 1 766 1205 7 0 0 chrUextra 23811483 23811618 -5193038 + 5S_DM RNA RNA 1 135 0 1 766 418 303 38 38 chrUextra 23812226 23812464 -5192192 + Gypsy3_I LTR Gypsy 1179 1365 -4812 1 766 2816 178 18 13 chrUextra 23812638 23813265 -5191391 - SAR_DM Satellite Satellite -645 827 198 1 766 650 127 0 0 chrUextra 23813175 23813285 -5191371 + ARS406_DM Unknown Unknown 1 110 -243 1 766 21 36 0 0 chrUextra 23813433 23813461 -5191195 + AT_rich Low_complexity Low_complexity 1 28 0 1 766 1291 19 0 6 chrUextra 23813463 23813626 -5191030 - NTS_DM Other Other -41 199 38 1 766 907 9 0 27 chrUextra 23813626 23813738 -5190918 - NTS_DM Other Other -107 133 25 1 766 1278 30 0 6 chrUextra 23813790 23813955 -5190701 - NTS_DM Other Other -39 201 38 1 766 604 26 0 0 chrUextra 23813955 23814033 -5190623 - NTS_DM Other Other -107 133 56 1 766 22 56 0 0 chrUextra 23814257 23814293 -5190363 + AT_rich Low_complexity Low_complexity 1 36 0 1 766 356 167 42 92 chrUextra 23814338 23814457 -5190199 + Copia_I LTR Copia 4401 4513 -80 1 766 1866 174 6 14 chrUextra 23814883 23815529 -5189127 + SAR_DM Satellite Satellite 1 640 -558 1 766 933 79 6 18 chrUextra 23815629 23816275 -5188381 - RSP Satellite Satellite -55 638 1 1 766 5541 23 6 1 chrUextra 23816377 23817025 -5187631 + R2_DM LINE R2 2001 2651 -956 1 766 540 181 128 0 chrUextra 23817125 23817258 -5187398 - ARS406_DM Unknown Unknown -203 150 1 1 766 2586 191 28 13 chrUextra 23817155 23817772 -5186884 + SAR_DM Satellite Satellite 185 810 -662 1 766 3445 236 45 28 chrUextra 23817879 23819234 -5185422 - SAR_DM Satellite Satellite -382 1378 1 1 766 878 263 23 13 chrUextra 23818968 23819269 -5185387 + XDMR_DM Unknown Unknown 6 309 -51 1 766 5681 11 0 0 chrUextra 23820117 23820765 -5183891 + Invader2_I LTR Gypsy 983 1630 -2962 1 766 2442 108 23 5 chrUextra 23820865 23821511 -5183145 - DMSAT6 Satellite Satellite -113 658 1 1 766 3590 33 0 0 chrUextra 23821613 23822035 -5182621 + R1_DM LINE R1 1407 1828 -3528 1 766 1837 44 0 9 chrUextra 23822033 23822261 -5182395 + R1_DM LINE R1 1317 1542 -3814 1 766 5636 1 0 0 chrUextra 23822361 23823009 -5181647 - ROO_I LTR Pao -4189 4067 3420 1 766 1349 28 22 0 chrUextra 23823109 23823288 -5181368 - Stalker2_I LTR Gypsy -5646 1756 1574 1 766 2120 33 11 0 chrUextra 23823487 23823757 -5180899 - Stalker2_I LTR Gypsy -5810 1592 1320 1 766 5608 25 0 1 chrUextra 23823857 23824505 -5180151 - R1_DM LINE R1 -1549 3807 3161 1 766 2845 189 9 9 chrUextra 23824610 23825250 -5179406 + SAR_DM Satellite Satellite 437 1076 -396 1 766 220 141 46 15 chrUextra 23826107 23826172 -5178484 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 766 22 35 0 0 chrUextra 23826460 23826489 -5178167 + AT_rich Low_complexity Low_complexity 1 29 0 1 766 58 15 0 0 chrUextra 23826664 23826729 -5177927 + AT_rich Low_complexity Low_complexity 1 65 0 1 766 1835 179 25 10 chrUextra 23826849 23826863 -5177793 + SAR_DM Satellite Satellite 1 16 -1079 1 766 647 45 56 0 chrUextra 23826863 23826952 -5177704 - ARS406_DM Unknown Unknown -164 189 96 1 766 1835 179 25 10 chrUextra 23826952 23827367 -5177289 + SAR_DM Satellite Satellite 17 526 -569 1 766 824 81 8 0 chrUextra 23827373 23827497 -5177159 - ARS406_DM Unknown Unknown -194 159 35 1 766 4268 18 0 46 chrUextra 23827597 23828136 -5176520 - LSU-rRNA_Dme rRNA rRNA -3386 514 1 1 766 21 95 0 0 chrUextra 23828148 23828211 -5176445 + AT_rich Low_complexity Low_complexity 1 63 0 1 766 2139 0 0 91 chrUextra 23828345 23828630 -5176026 - LSU-rRNA_Dme rRNA rRNA -3641 259 1 1 766 21 95 0 0 chrUextra 23828642 23828705 -5175951 + AT_rich Low_complexity Low_complexity 1 63 0 1 766 34 24 0 0 chrUextra 23828918 23828959 -5175697 + AT_rich Low_complexity Low_complexity 1 41 0 1 766 2954 6 0 0 chrUextra 23829093 23829449 -5175207 - DM176_I LTR Gypsy -11 6409 6054 1 766 2276 29 0 16 chrUextra 23829423 23829741 -5174915 - DM176_I LTR Gypsy -520 5900 5588 1 766 3017 158 14 13 chrUextra 23829861 23830489 -5174167 + SAR_DM Satellite Satellite 326 954 -518 1 766 2633 87 20 9 chrUextra 23830589 23831237 -5173419 + DMSAT6 Satellite Satellite 1 655 -64 1 766 5619 0 0 3 chrUextra 23832085 23832733 -5171923 + ROO_I LTR Pao 4705 5350 -2906 1 766 3052 170 8 9 chrUextra 23832833 23833464 -5171192 + SAR_DM Satellite Satellite 447 1076 -396 1 766 1105 48 18 12 chrUextra 23834019 23834187 -5170469 + (GAGAA)n Simple_repeat Simple_repeat 1 169 0 1 766 4975 30 2 6 chrUextra 23834336 23834977 -5169679 + PROTOP_A DNA P 1 638 -467 1 766 5414 1 0 0 chrUextra 23835077 23835725 -5168931 + DM176_I LTR Gypsy 1418 2065 -4355 1 766 5591 3 0 0 chrUextra 23836573 23837221 -5167435 - FW_DM LINE Jockey -905 3787 3140 1 766 667 149 149 55 chrUextra 23837321 23837576 -5167080 + STALKER4_I LTR Gypsy 885 1163 -5367 1 766 3127 5 0 5 chrUextra 23837574 23837968 -5166688 + STALKER4_I LTR Gypsy 1271 1662 -4868 1 766 5565 1 0 0 chrUextra 23838068 23838715 -5165941 + ROO_I LTR Pao 4935 5581 -2675 1 766 5372 9 1 3 chrUextra 23838815 23839462 -5165194 - R1_DM LINE R1 -1098 4258 3613 1 766 423 101 0 0 chrUextra 23839562 23839631 -5165025 - ARS406_DM Unknown Unknown -284 69 1 1 766 2838 180 8 3 chrUextra 23839569 23840205 -5164451 + SAR_DM Satellite Satellite 224 862 -610 1 766 3593 40 0 2 chrUextra 23840486 23840956 -5163700 + IDEFIX_I LTR Gypsy 1 469 -5159 1 766 2731 179 11 12 chrUextra 23841058 23841699 -5162957 - SAR_DM Satellite Satellite -587 885 246 1 766 1069 20 13 7 chrUextra 23841803 23841955 -5162701 + NTS_DM Other Other 49 201 -39 1 766 870 9 0 27 chrUextra 23842007 23842119 -5162537 + NTS_DM Other Other 25 133 -107 1 766 1252 18 0 6 chrUextra 23842119 23842284 -5162372 + NTS_DM Other Other 38 201 -39 1 766 848 18 0 27 chrUextra 23842336 23842448 -5162208 + NTS_DM Other Other 25 133 -107 1 766 5183 30 0 2 chrUextra 23842552 23843197 -5161459 + R1_DM LINE R1 3152 3795 -1561 1 766 25 0 0 0 chrUextra 23843386 23843411 -5161245 + AT_rich Low_complexity Low_complexity 1 25 0 1 766 924 192 61 0 chrUextra 23844044 23844273 -5160383 - DNAREP1_DM LINE Penelope -351 243 1 1 766 3081 202 9 5 chrUextra 23844791 23845428 -5159228 + Gypsy2_I LTR Gypsy 5135 5774 -361 1 766 5220 28 3 1 chrUextra 23845538 23846185 -5158471 + MAX_I LTR Pao 4375 5022 -2892 1 766 2683 174 21 21 chrUextra 23846288 23846912 -5157744 + SAR_DM Satellite Satellite 246 869 -603 1 766 478 231 30 42 chrUextra 23846763 23846930 -5157726 - XDMR Unknown Unknown 0 361 197 1 766 1025 0 0 0 chrUextra 23847779 23847903 -5156753 - QUASIMODO_LTR LTR Gypsy -534 124 1 1 766 531 0 0 0 chrUextra 23847903 23847972 -5156684 + TABOR_I LTR Gypsy 6268 6336 0 1 766 3976 4 0 0 chrUextra 23847970 23848426 -5156230 + TABOR_LTR LTR Gypsy 1 456 -50 1 766 1932 4 0 4 chrUextra 23848526 23848753 -5155903 + LSU-rRNA_Dme rRNA rRNA 3675 3900 0 1 766 22 56 0 0 chrUextra 23848825 23848861 -5155795 + AT_rich Low_complexity Low_complexity 1 36 0 1 766 246 150 0 0 chrUextra 23848866 23848906 -5155750 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 766 246 150 0 0 chrUextra 23848958 23848998 -5155658 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 766 246 150 0 0 chrUextra 23849050 23849090 -5155566 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 766 1129 107 6 0 chrUextra 23849274 23849452 -5155204 - DNAREP1_DM LINE Penelope -415 179 1 1 766 877 126 3 0 chrUextra 23849747 23849920 -5154736 - DNAREP1_DM LINE Penelope -234 360 60 1 766 29 28 0 0 chrUextra 23850496 23850532 -5154124 + AT_rich Low_complexity Low_complexity 1 36 0 1 766 666 179 14 14 chrUextra 23850830 23850977 -5153679 - HETRP_DM Satellite Satellite -197 1675 1529 1 766 655 186 7 14 chrUextra 23851119 23851261 -5153395 - HETRP_DM Satellite Satellite -203 1669 1529 1 766 5601 1 0 1 chrUextra 23851514 23852161 -5152495 - LSU-rRNA_Dme rRNA rRNA -1348 2552 1907 1 766 3239 99 70 34 chrUextra 23852261 23852908 -5151748 + STALKER4_I LTR Gypsy 609 1278 -5252 1 766 5271 9 3 3 chrUextra 23853020 23853655 -5151001 + G_DM LINE Jockey 1342 1976 -2370 1 766 4287 4 0 0 chrUextra 23853755 23854249 -5150407 + LSU-rRNA_Dme rRNA rRNA 2149 2642 -1258 1 766 1306 6 6 6 chrUextra 23854241 23854402 -5150254 + R1_DM LINE R1 3726 3886 -1470 1 766 292 192 20 20 chrUextra 23854502 23854603 -5150053 + XDMR_DM Unknown Unknown 260 360 0 1 95 2449 183 11 27 chrUextra 23854516 23855149 -5149507 - SAR_DM Satellite Satellite -352 1120 498 1 767 2805 174 16 11 chrUextra 23855252 23855893 -5148763 + SAR_DM Satellite Satellite 252 895 -577 1 767 5464 5 0 2 chrUextra 23855996 23856636 -5148020 + DOC LINE Jockey 2084 2722 -2003 1 767 5245 31 0 0 chrUextra 23856743 23857390 -5147266 + R1_DM LINE R1 2383 3029 -2327 1 767 5343 3 1 0 chrUextra 23857490 23858137 -5146519 + ROO_I LTR Pao 760 1407 -6849 1 767 5539 0 0 0 chrUextra 23858237 23858884 -5145772 + BLOOD_I LTR Gypsy 2564 3210 -3403 1 767 5481 17 0 0 chrUextra 23858984 23859631 -5145025 - DOC2_DM LINE Jockey -461 4332 3686 1 767 5256 30 0 3 chrUextra 23859731 23860378 -5144278 - R1_DM LINE R1 -481 4875 4231 1 767 3420 0 0 2 chrUextra 23860478 23860872 -5143784 + LSU-rRNA_Dme rRNA rRNA 2262 2654 -1246 1 767 1893 0 9 0 chrUextra 23860901 23861125 -5143531 + R1_DM LINE R1 1 226 -5130 1 767 2616 179 16 25 chrUextra 23861225 23861871 -5142785 + SAR_DM Satellite Satellite 461 1100 -372 1 767 822 18 0 35 chrUextra 23861980 23862093 -5142563 - NTS_DM Other Other -107 133 25 1 767 1252 18 0 6 chrUextra 23862145 23862310 -5142346 - NTS_DM Other Other -39 201 38 1 767 840 9 0 35 chrUextra 23862310 23862423 -5142233 - NTS_DM Other Other -107 133 25 1 767 1019 21 0 7 chrUextra 23862475 23862619 -5142037 - NTS_DM Other Other -39 201 59 1 767 4385 44 23 9 chrUextra 23862719 23863366 -5141290 + DM176_I LTR Gypsy 384 1039 -5381 1 767 1419 136 14 195 chrUextra 23863466 23864113 -5140543 - BATUMI_I LTR Pao -6889 1074 545 1 767 471 113 0 0 chrUextra 23864213 23864282 -5140374 - S_DM DNA Tc1 -685 1051 983 1 767 4773 14 0 0 chrUextra 23864282 23864860 -5139796 - PROTOP_A DNA P 0 1105 528 1 767 5554 3 0 0 chrUextra 23865707 23866354 -5138302 - DM1731_I LTR Copia -1421 2555 1909 1 767 28 48 0 0 chrUextra 23866728 23866770 -5137886 + AT_rich Low_complexity Low_complexity 1 42 0 1 767 438 173 135 0 chrUextra 23866840 23866944 -5137712 - DNAREP1_DM LINE Penelope -31 563 446 1 767 4460 30 5 59 chrUextra 23867202 23867848 -5136808 + BATUMI_I LTR Pao 2517 3127 -4836 1 767 5313 19 2 2 chrUextra 23868697 23869342 -5135314 - NINJA_I LTR Pao -2674 3337 2693 1 767 2567 60 6 6 chrUextra 23869444 23869795 -5134861 - R1_DM LINE R1 -5005 351 1 1 767 2213 8 0 4 chrUextra 23869829 23870089 -5134567 - R1_DM LINE R1 0 5356 5098 1 767 459 0 137 0 chrUextra 23870191 23870322 -5134334 + (TA)n Simple_repeat Simple_repeat 1 149 0 1 767 4490 0 0 0 chrUextra 23870322 23870836 -5133820 - NOMAD_LTR LTR Gypsy 0 518 5 1 767 198 0 0 0 chrUextra 23871033 23871055 -5133601 + (CA)n Simple_repeat Simple_repeat 2 23 0 1 767 5612 1 0 3 chrUextra 23871683 23872330 -5132326 + SSU-rRNA_Dme rRNA rRNA 68 712 -1283 1 767 5385 0 0 0 chrUextra 23872431 23873077 -5131579 + ROO_I LTR Pao 560 1205 -7051 1 767 367 0 0 0 chrUextra 23873177 23873223 -5131433 + DM176_LTR LTR Gypsy 462 507 0 1 767 4283 8 0 0 chrUextra 23873234 23873741 -5130915 + DM176_LTR LTR Gypsy 1 507 0 1 767 672 0 12 0 chrUextra 23873741 23873824 -5130832 + DM176_I LTR Gypsy 1 84 -6336 1 767 1567 28 14 22 chrUextra 23874671 23874894 -5129762 - NTS_DM Other Other -19 221 1 1 767 1737 21 17 17 chrUextra 23874894 23875134 -5129522 - NTS_DM Other Other 0 240 1 1 767 1204 22 22 22 chrUextra 23875134 23875318 -5129338 - NTS_DM Other Other 0 240 57 1 767 2750 160 23 17 chrUextra 23875418 23876061 -5128595 + SAR_DM Satellite Satellite 206 852 -620 1 767 490 0 0 0 chrUextra 23876165 23876237 -5128419 + HMSBEAGLE_I LTR Gypsy 716 787 -5742 1 767 974 29 52 12 chrUextra 23876252 23876424 -5128232 + (TTA)n Simple_repeat Simple_repeat 1 179 0 1 767 3128 3 5 8 chrUextra 23876424 23876812 -5127844 + HMSBEAGLE_I LTR Gypsy 969 1355 -5174 1 767 1986 175 8 25 chrUextra 23876914 23877369 -5127287 + SAR_DM Satellite Satellite 1 590 -600 1 767 1031 89 0 0 chrUextra 23877369 23877527 -5127129 - ARS406_DM Unknown Unknown -195 158 1 1 767 1986 175 8 25 chrUextra 23877527 23877558 -5127098 + SAR_DM Satellite Satellite 591 632 -558 1 767 4449 15 0 0 chrUextra 23877666 23878193 -5126463 - R1_DM LINE R1 -804 4552 4026 1 767 778 10 0 48 chrUextra 23878203 23878306 -5126350 - R1_DM LINE R1 -1690 3666 3569 1 767 1249 99 142 4 chrUextra 23878406 23878639 -5126017 + MDG1_I LTR Gypsy 1272 1536 -5060 1 767 827 80 0 0 chrUextra 23878633 23878758 -5125898 + MDG1_I LTR Gypsy 2539 2663 -3933 1 767 2420 17 7 0 chrUextra 23878760 23879053 -5125603 + ROO_LTR LTR Pao 1 295 -133 1 767 2040 16 59 0 chrUextra 23879153 23879409 -5125247 - IVK_DM LINE I -5131 271 1 1 767 360 0 0 0 chrUextra 23879410 23879450 -5125206 + (A)n Simple_repeat Simple_repeat 1 40 0 1 767 1554 157 20 20 chrUextra 23879450 23879795 -5124861 - SAR_DM Satellite Satellite -416 1056 712 1 767 5068 9 14 0 chrUextra 23879906 23880547 -5124109 - Stalker2_I LTR Gypsy -6254 1148 499 1 767 631 287 49 29 chrUextra 23880649 23881141 -5123515 + SAR_DM Satellite Satellite 331 832 -640 1 767 362 275 37 17 chrUextra 23880997 23881276 -5123380 - XDMR_DM Unknown Unknown -1 359 99 1 767 345 47 0 0 chrUextra 23881998 23882041 -5122615 + (GAGAA)n Simple_repeat Simple_repeat 3 45 0 1 767 2847 183 6 6 chrUextra 23882147 23882786 -5121870 + SAR_DM Satellite Satellite 247 885 -587 1 767 5536 0 0 2 chrUextra 23882891 23883535 -5121121 - LSU-rRNA_Dme rRNA rRNA -2658 1242 600 1 767 5554 5 0 0 chrUextra 23884382 23885029 -5119627 - R1_DM LINE R1 -2590 2766 2120 1 767 941 101 340 53 chrUextra 23885129 23885466 -5119190 + DNAREP1_DM LINE Penelope 94 594 0 1 767 5541 3 0 0 chrUextra 23885876 23886523 -5118133 - R1_DM LINE R1 -2267 3089 2443 1 767 2347 95 9 33 chrUextra 23886623 23887270 -5117386 + DMSAT6 Satellite Satellite 1 631 -56 1 767 365 0 22 0 chrUextra 23887370 23887415 -5117241 + (TTCTC)n Simple_repeat Simple_repeat 4 49 0 1 767 504 281 0 0 chrUextra 23888118 23888257 -5116399 - Gypsy3_I LTR Gypsy -4008 2169 2031 1 767 728 194 0 0 chrUextra 23888630 23888764 -5115892 - Gypsy3_I LTR Gypsy -4643 1534 1401 1 767 5187 11 0 1 chrUextra 23888864 23889511 -5115145 + DM176_I LTR Gypsy 887 1532 -4888 1 767 436 155 0 0 chrUextra 23890020 23890091 -5114565 - TAHRE LINE telomeric -2867 7596 7526 1 767 908 73 5 20 chrUextra 23890360 23891004 -5113652 - RSP Satellite Satellite -13 634 1 1 767 5456 12 1 0 chrUextra 23891105 23891752 -5112904 - DOC2_DM LINE Jockey -1911 2882 2235 1 767 446 125 0 0 chrUextra 23891852 23891932 -5112724 - SAR_DM Satellite Satellite -850 622 543 1 767 2264 169 25 15 chrUextra 23891943 23892472 -5112184 - SAR_DM Satellite Satellite -396 1076 543 1 767 5420 1 1 1 chrUextra 23892599 23893246 -5111410 + R1_DM LINE R1 722 1368 -3988 1 767 2318 103 23 25 chrUextra 23893346 23893993 -5110663 - DMSAT6 Satellite Satellite -81 646 1 1 767 34 24 0 0 chrUextra 23894367 23894408 -5110248 + AT_rich Low_complexity Low_complexity 1 41 0 1 767 261 0 0 0 chrUextra 23894840 23894869 -5109787 + (TTCTC)n Simple_repeat Simple_repeat 2 30 0 1 767 327 25 0 0 chrUextra 23894869 23894908 -5109748 + (TTGTG)n Simple_repeat Simple_repeat 3 42 0 1 767 1620 2 0 2 chrUextra 23894908 23895316 -5109340 + (GAGAA)n Simple_repeat Simple_repeat 1 406 0 1 767 2033 173 14 8 chrUextra 23895590 23896234 -5108422 - SAR_DM Satellite Satellite -620 647 1 1 767 5207 12 16 0 chrUextra 23896334 23896981 -5107675 - DMRT1B LINE R1 -3891 1292 636 1 767 777 56 0 0 chrUextra 23897081 23897189 -5107467 - ARS406_DM Unknown Unknown -173 180 73 1 767 2508 171 9 4 chrUextra 23897189 23897724 -5106932 + SAR_DM Satellite Satellite 354 891 -581 1 767 297 233 87 10 chrUextra 23898034 23898138 -5106518 + DNAREP1_DM LINE Penelope 67 178 -416 1 767 435 110 216 20 chrUextra 23898373 23898475 -5106181 + ROVER-LTR_DM LTR Gypsy 1 122 -245 1 767 493 0 0 0 chrUextra 23898575 23898631 -5106025 - NTS_DM Other Other -184 56 1 1 767 1861 0 17 13 chrUextra 23898631 23898870 -5105786 - NTS_DM Other Other 0 240 1 1 767 1813 13 17 13 chrUextra 23898870 23899109 -5105547 - NTS_DM Other Other 0 240 1 1 767 637 37 35 35 chrUextra 23899109 23899222 -5105434 - NTS_DM Other Other 0 240 128 1 767 5540 5 0 0 chrUextra 23899331 23899969 -5104687 - DOC2_DM LINE Jockey -545 4248 3611 1 767 2615 185 27 7 chrUextra 23900090 23900710 -5103946 + SAR_DM Satellite Satellite 326 958 -514 1 767 2831 175 9 8 chrUextra 23900819 23901463 -5103193 + SAR_DM Satellite Satellite 192 836 -636 1 767 1634 32 14 9 chrUextra 23901567 23901788 -5102868 - NTS_DM Other Other -18 222 1 1 767 1737 21 17 17 chrUextra 23901788 23902028 -5102628 - NTS_DM Other Other 0 240 1 1 767 1213 17 22 22 chrUextra 23902028 23902210 -5102446 - NTS_DM Other Other 0 240 59 1 767 51 31 0 0 chrUextra 23902310 23902375 -5102281 + AT_rich Low_complexity Low_complexity 1 65 0 1 767 22 35 0 0 chrUextra 23902551 23902580 -5102076 + AT_rich Low_complexity Low_complexity 1 29 0 1 767 224 185 31 0 chrUextra 23902807 23902872 -5101784 + (TAA)n Simple_repeat Simple_repeat 2 68 0 1 767 5693 1 0 0 chrUextra 23903057 23903704 -5100952 - Gypsy6_I LTR Gypsy -1261 5751 5105 1 767 5062 5 57 0 chrUextra 23903804 23904451 -5100205 + DM176_I LTR Gypsy 800 1483 -4937 1 767 3481 17 0 2 chrUextra 23904554 23904976 -5099680 + R1_DM LINE R1 1873 2293 -3063 1 767 1941 34 0 0 chrUextra 23904962 23905198 -5099458 + R1_DM LINE R1 3134 3369 -1987 1 767 5184 5 0 0 chrUextra 23905298 23905945 -5098711 + DM176_I LTR Gypsy 5476 6122 -298 1 767 4937 56 0 2 chrUextra 23906045 23906690 -5097966 - GTWIN_I LTR Gypsy -420 6001 5358 1 767 2110 124 10 49 chrUextra 23906986 23907439 -5097217 + Gypsy12_I LTR Gypsy 223 716 -4830 1 767 5384 19 0 0 chrUextra 23907539 23908186 -5096470 + R1_DM LINE R1 2018 2664 -2692 1 767 2713 178 42 9 chrUextra 23909033 23909680 -5094976 - SAR_DM Satellite Satellite -517 955 288 1 767 1076 143 36 36 chrUextra 23909785 23910003 -5094653 - HMSBEAGLE_I LTR Gypsy -580 5949 5732 1 767 2411 19 148 0 chrUextra 23910003 23910151 -5094505 - Stalker3_LTR LTR Gypsy 0 372 225 1 767 207 0 0 0 chrUextra 23910151 23910174 -5094482 + (CTTAT)n Simple_repeat Simple_repeat 2 24 0 1 767 2411 19 148 0 chrUextra 23910174 23910349 -5094307 - Stalker3_LTR LTR Gypsy -148 224 2 1 767 337 9 27 0 chrUextra 23910349 23910401 -5094255 - STALKER4_I LTR Gypsy 0 6530 6491 1 767 1776 0 0 0 chrUextra 23910527 23910728 -5093928 + LSU-rRNA_Dme rRNA rRNA 2454 2654 -1246 1 767 3822 5 0 0 chrUextra 23910727 23911174 -5093482 + R1_DM LINE R1 3231 3677 -1679 1 767 1113 6 36 18 chrUextra 23911274 23911440 -5093216 + NTS_DM Other Other 72 240 0 1 767 1279 12 0 18 chrUextra 23911440 23911605 -5093051 + NTS_DM Other Other 1 162 -78 1 767 488 119 36 0 chrUextra 23911715 23911799 -5092857 + NTS_DM Other Other 4 90 -150 1 767 5320 12 2 0 chrUextra 23912024 23912668 -5091988 - FW_DM LINE Jockey -1460 3232 2588 1 767 5378 1 0 5 chrUextra 23912768 23913415 -5091241 + FW_DM LINE Jockey 2613 3256 -1436 1 767 1189 24 6 41 chrUextra 23913518 23913689 -5090967 - NINJA_LTR LTR Pao -152 165 1 1 767 21 0 0 0 chrUextra 23913714 23913735 -5090921 + AT_rich Low_complexity Low_complexity 1 21 0 1 767 2857 156 17 17 chrUextra 23914273 23914906 -5089750 + SAR_DM Satellite Satellite 326 958 -514 1 767 2273 167 4 6 chrUextra 23915009 23915480 -5089176 + SAR_DM Satellite Satellite 434 903 -569 1 767 1065 76 0 0 chrUextra 23915487 23915645 -5089011 - ARS406_DM Unknown Unknown -195 158 1 1 767 362 209 0 19 chrUextra 23915549 23915656 -5089000 + SAR_DM Satellite Satellite 192 296 -1176 1 767 3068 5 0 69 chrUextra 23915756 23916175 -5088481 - LSU-rRNA_Dme rRNA rRNA -3510 390 1 1 767 21 95 0 0 chrUextra 23916187 23916250 -5088406 + AT_rich Low_complexity Low_complexity 1 63 0 1 767 356 208 65 9 chrUextra 23916908 23917015 -5087641 - Copia_I LTR Copia -80 4513 4401 1 767 29 28 0 0 chrUextra 23917060 23917096 -5087560 + AT_rich Low_complexity Low_complexity 1 36 0 1 767 5355 0 25 1 chrUextra 23917250 23917897 -5086759 + ROO_I LTR Pao 5762 6423 -1833 1 767 4244 10 0 0 chrUextra 23917997 23918496 -5086160 - DMRT1B LINE R1 -2701 2482 1984 1 767 1355 6 0 0 chrUextra 23918484 23918644 -5086012 - DMRT1B LINE R1 -3927 1256 1097 1 767 21 36 0 0 chrUextra 23918744 23918772 -5085884 + AT_rich Low_complexity Low_complexity 1 28 0 1 767 909 50 0 0 chrUextra 23918793 23918914 -5085742 + LSU-rRNA_Dme rRNA rRNA 1 121 -3779 1 767 246 33 0 0 chrUextra 23918910 23918940 -5085716 - NTS_DM Other Other -209 31 2 1 767 424 306 61 14 chrUextra 23919096 23919391 -5085265 + G6_DM LINE Jockey 266 574 -1468 1 767 5312 14 6 5 chrUextra 23919494 23920138 -5084518 - MICROPIA_I LTR Gypsy -469 4007 3363 1 767 3742 2 0 0 chrUextra 23920270 23920698 -5083958 + ROO_LTR LTR Pao 1 428 0 1 767 22 0 0 0 chrUextra 23920710 23920732 -5083924 + AT_rich Low_complexity Low_complexity 1 22 0 1 767 21 71 0 0 chrUextra 23920773 23920815 -5083841 + AT_rich Low_complexity Low_complexity 1 42 0 1 767 3002 269 53 22 chrUextra 23921732 23923121 -5081535 - SAR_DM Satellite Satellite -864 1431 1 1 767 695 81 6 22 chrUextra 23923227 23923537 -5081119 + RSP Satellite Satellite 1 305 0 1 767 2564 28 0 24 chrUextra 23923541 23923873 -5080783 - G5_DM LINE Jockey 0 4856 4533 1 767 5607 1 0 0 chrUextra 23923973 23924620 -5080036 + ROO_I LTR Pao 5201 5847 -2409 1 767 348 89 0 32 chrUextra 23924720 23924774 -5079882 - DMTOM1_LTR LTR Gypsy -18 392 317 1 767 571 148 40 16 chrUextra 23924774 23924898 -5079758 - DMTOM1_LTR LTR Gypsy 0 410 284 1 767 254 190 17 0 chrUextra 23924915 23924973 -5079683 - DM176_LTR LTR Gypsy -141 366 308 1 767 248 133 22 0 chrUextra 23925092 23925137 -5079519 - DM176_LTR LTR Gypsy -238 269 224 1 767 801 111 0 0 chrUextra 23925241 23925367 -5079289 - DM176_I LTR Gypsy 0 6420 6295 1 767 5206 16 2 0 chrUextra 23925467 23926092 -5078564 - DMRT1B LINE R1 -1932 3251 2626 1 767 2726 180 6 19 chrUextra 23926215 23926861 -5077795 - SAR_DM Satellite Satellite -371 1101 464 1 767 3887 2 0 0 chrUextra 23926963 23927409 -5077247 + LSU-rRNA_Dme rRNA rRNA 2210 2655 -1245 1 767 1600 10 5 10 chrUextra 23927405 23927608 -5077048 + R1_DM LINE R1 3723 3924 -1432 1 767 1198 45 6 0 chrUextra 23928199 23928355 -5076301 + PROTOP DNA P 74 230 -4250 1 767 2737 179 25 8 chrUextra 23928455 23929101 -5075555 - SAR_DM Satellite Satellite -417 1055 399 1 767 5077 35 9 0 chrUextra 23929202 23929849 -5074807 - R1_DM LINE R1 -2297 3059 2407 1 767 1885 39 3 92 chrUextra 23930089 23930400 -5074256 - BATUMI_I LTR Pao -679 7284 7002 1 767 1577 5 0 15 chrUextra 23930400 23930596 -5074060 - BATUMI_I LTR Pao 0 7963 7771 1 767 729 0 0 0 chrUextra 23930696 23930777 -5073879 + (CAAGA)n Simple_repeat Simple_repeat 1 81 0 1 767 4674 2 8 74 chrUextra 23931443 23932090 -5072566 + LSU-rRNA_Dme rRNA rRNA 1235 1838 -2062 1 767 2482 174 43 19 chrUextra 23932192 23932812 -5071844 - SAR_DM Satellite Satellite -640 832 198 1 767 558 128 18 9 chrUextra 23932721 23932831 -5071825 + ARS406_DM Unknown Unknown 1 111 -242 1 767 2452 176 7 11 chrUextra 23932941 23933485 -5071171 - SAR_DM Satellite Satellite -435 1037 496 1 767 751 21 0 0 chrUextra 23933490 23933584 -5071072 + ARS406_DM Unknown Unknown 90 183 -170 1 767 2274 105 18 18 chrUextra 23933717 23934330 -5070326 - DMSAT6 Satellite Satellite 0 613 1 1 767 5266 3 3 3 chrUextra 23935178 23935825 -5068831 - MAX_I LTR Pao -6779 1135 489 1 767 58 0 0 0 chrUextra 23936020 23936078 -5068578 + AT_rich Low_complexity Low_complexity 1 58 0 1 767 370 185 23 105 chrUextra 23936109 23936242 -5068414 - DMTOM1_LTR LTR Gypsy -7 403 282 1 767 2073 28 0 4 chrUextra 23936262 23936517 -5068139 - PROTOP_A DNA P -851 254 1 1 767 398 37 0 0 chrUextra 23936672 23936726 -5067930 + ARS406_DM Unknown Unknown 105 158 -195 1 767 2626 174 7 11 chrUextra 23936733 23937307 -5067349 - SAR_DM Satellite Satellite -569 903 332 1 767 5307 17 0 5 chrUextra 23937420 23938066 -5066590 + QUASIMODO_I LTR Gypsy 107 749 -5311 1 767 5353 11 0 0 chrUextra 23938166 23938813 -5065843 - STALKER4_I LTR Gypsy -415 6115 5469 1 767 5356 9 0 1 chrUextra 23938913 23939560 -5065096 - DM176_I LTR Gypsy -1077 5343 4698 1 767 458 150 174 8 chrUextra 23939662 23939783 -5064873 + DM297_I LTR Gypsy 3073 3213 -2954 1 767 389 248 17 17 chrUextra 23939763 23939878 -5064778 + DM297_I LTR Gypsy 3380 3494 -2673 1 767 1256 250 33 12 chrUextra 23939878 23940299 -5064357 + TOM_I LTR Gypsy 4557 4986 -1126 1 767 1971 27 0 19 chrUextra 23940407 23940667 -5063989 - MAX_I LTR Pao -113 7801 7547 1 767 3300 37 0 2 chrUextra 23940643 23941054 -5063602 - MAX_I LTR Pao -1106 6808 6399 1 767 897 173 102 15 chrUextra 23941311 23941516 -5063140 + DMLTR5 LTR Gypsy 44 266 0 1 767 351 49 65 16 chrUextra 23941515 23941577 -5063079 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 1 767 244 128 0 21 chrUextra 23941599 23941647 -5063009 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 767 5428 6 1 1 chrUextra 23941901 23942548 -5062108 + R1_DM LINE R1 3619 4265 -1091 1 767 2867 158 25 14 chrUextra 23942648 23943295 -5061361 + SAR_DM Satellite Satellite 374 1027 -445 1 767 3827 99 17 31 chrUextra 23943395 23944031 -5060625 - TART LINE telomeric -3832 10645 10019 1 767 2374 98 13 19 chrUextra 23944169 23944787 -5059869 + DMSAT6 Satellite Satellite 1 613 0 1 767 4360 10 4 0 chrUextra 23944887 23945405 -5059251 + R1_DM LINE R1 4837 5356 0 1 767 644 74 11 0 chrUextra 23945438 23945533 -5059123 + R1_DM LINE R1 1 96 -5260 1 767 2684 0 0 73 chrUextra 23945633 23945991 -5058665 - LSU-rRNA_Dme rRNA rRNA -3568 332 1 1 767 21 95 0 0 chrUextra 23946003 23946066 -5058590 + AT_rich Low_complexity Low_complexity 1 63 0 1 767 5031 42 8 1 chrUextra 23946379 23947025 -5057631 + R1_DM LINE R1 889 1538 -3818 1 767 5280 20 1 1 chrUextra 23947125 23947771 -5056885 - R1_DM LINE R1 -1293 4063 3418 1 767 2973 160 13 9 chrUextra 23947871 23948503 -5056153 - SAR_DM Satellite Satellite -470 1002 369 1 767 5598 0 1 1 chrUextra 23948617 23949263 -5055393 - LSU-rRNA_Dme rRNA rRNA -828 3072 2427 1 767 3067 152 11 11 chrUextra 23949367 23950006 -5054650 + SAR_DM Satellite Satellite 399 1037 -435 1 767 5444 1 3 0 chrUextra 23950109 23950755 -5053901 + ROO_I LTR Pao 4794 5441 -2815 1 767 3958 45 8 17 chrUextra 23950857 23951501 -5053155 + Stalker2_I LTR Gypsy 6702 7224 -178 1 767 4535 53 0 34 chrUextra 23951602 23952247 -5052409 - R1_DM LINE R1 -4571 785 163 1 767 232 31 31 0 chrUextra 23952347 23952379 -5052277 - NTS_DM Other Other -207 33 1 1 767 1618 38 16 29 chrUextra 23952379 23952622 -5052034 - NTS_DM Other Other 0 240 1 1 767 1677 21 16 25 chrUextra 23952622 23952864 -5051792 - NTS_DM Other Other 0 240 1 1 767 777 24 31 31 chrUextra 23952864 23952993 -5051663 - NTS_DM Other Other 0 240 112 1 767 28 48 0 0 chrUextra 23953345 23953387 -5051269 + AT_rich Low_complexity Low_complexity 1 42 0 1 767 487 103 39 0 chrUextra 23953659 23953737 -5050919 - NTS_DM Other Other -150 90 10 1 767 2899 176 8 5 chrUextra 23953844 23954484 -5050172 + SAR_DM Satellite Satellite 230 871 -601 1 767 262 106 0 21 chrUextra 23954612 23954660 -5049996 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 767 4705 57 3 1 chrUextra 23956077 23956723 -5047933 + Stalker2_I LTR Gypsy 3559 4205 -3197 1 767 1453 42 18 27 chrUextra 23956823 23957045 -5047611 + NTS_DM Other Other 21 240 0 1 767 1668 34 17 21 chrUextra 23957045 23957286 -5047370 + NTS_DM Other Other 1 240 0 1 767 1268 55 0 11 chrUextra 23957286 23957469 -5047187 + NTS_DM Other Other 1 181 -59 1 767 2631 188 9 8 chrUextra 23957570 23958202 -5046454 - SAR_DM Satellite Satellite -645 827 195 1 767 565 142 0 0 chrUextra 23958109 23958215 -5046441 + ARS406_DM Unknown Unknown 1 106 -247 1 767 5508 3 0 0 chrUextra 23958323 23958961 -5045695 - R1_DM LINE R1 -344 5012 4375 1 767 5447 12 0 0 chrUextra 23959064 23959707 -5044949 - Gypsy4_I LTR Gypsy -4586 1702 1060 1 767 326 51 67 17 chrUextra 23959807 23959867 -5044789 + HMSBEAGLE_I LTR Gypsy 3 65 -6464 1 767 262 106 0 21 chrUextra 23959889 23959937 -5044719 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 767 226 0 0 0 chrUextra 23960553 23960579 -5044077 - NTS_DM Other Other -177 63 38 1 767 832 9 9 27 chrUextra 23960579 23960690 -5043966 - NTS_DM Other Other -107 133 25 1 767 21 57 0 0 chrUextra 23960716 23960751 -5043905 + AT_rich Low_complexity Low_complexity 1 35 0 1 767 1234 24 0 6 chrUextra 23960751 23960916 -5043740 - NTS_DM Other Other -39 201 38 1 767 833 28 0 27 chrUextra 23960916 23961028 -5043628 - NTS_DM Other Other -107 133 25 1 767 794 25 0 8 chrUextra 23961080 23961199 -5043457 - NTS_DM Other Other -39 201 84 1 767 5596 1 0 0 chrUextra 23961299 23961945 -5042711 - FW_DM LINE Jockey -2228 2464 1819 1 767 27 49 0 0 chrUextra 23962143 23962184 -5042472 + AT_rich Low_complexity Low_complexity 1 41 0 1 767 518 108 81 0 chrUextra 23962197 23962308 -5042348 - TART LINE telomeric -3988 10489 10370 1 767 974 208 115 57 chrUextra 23962308 23962691 -5041965 - HETA LINE telomeric -358 5723 5319 1 767 1901 9 0 0 chrUextra 23962791 23963016 -5041640 + R2_DM LINE R2 3381 3605 -2 1 767 3658 7 0 0 chrUextra 23963012 23963437 -5041219 + LSU-rRNA_Dme rRNA rRNA 2578 3002 -898 1 767 1334 177 12 11 chrUextra 23963537 23964183 -5040473 + SAR_DM Satellite Satellite 1 646 -645 1 767 5022 14 31 3 chrUextra 23964283 23964929 -5039727 + Invader2_I LTR Gypsy 148 811 -3781 1 767 402 272 73 51 chrUextra 23965029 23965343 -5039313 + QUASIMODO_I LTR Gypsy 1409 1729 -4331 1 767 5140 14 0 0 chrUextra 23965775 23966421 -5038235 + DM176_I LTR Gypsy 5372 6017 -403 1 767 1157 15 0 0 chrUextra 23966774 23966909 -5037747 + 5S_DM RNA RNA 1 135 0 1 767 2615 10 0 3 chrUextra 23968013 23968322 -5036334 + MICROPIA_I LTR Gypsy 328 635 -3841 1 767 2954 12 0 0 chrUextra 23968313 23968659 -5035997 + MICROPIA_I LTR Gypsy 744 1089 -3387 1 767 1281 250 67 11 chrUextra 23968944 23969405 -5035251 + Gypsy4_I LTR Gypsy 2007 2493 -3795 1 767 3318 22 0 0 chrUextra 23969505 23969906 -5034750 + DMCR1A LINE CR1 2442 2842 -1628 1 767 1980 44 0 4 chrUextra 23969900 23970151 -5034505 + DMCR1A LINE CR1 3484 3733 -737 1 767 5246 1 0 5 chrUextra 23970251 23970897 -5033759 + ROO_I LTR Pao 730 1372 -6884 1 767 1374 54 0 0 chrUextra 23971004 23971246 -5033410 + (TTCTC)n Simple_repeat Simple_repeat 1 242 0 1 767 22 56 0 0 chrUextra 23971831 23971867 -5032789 + AT_rich Low_complexity Low_complexity 1 36 0 1 767 246 150 0 0 chrUextra 23971872 23971912 -5032744 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 767 246 150 0 0 chrUextra 23971964 23972004 -5032652 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 767 246 150 0 0 chrUextra 23972056 23972096 -5032560 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 767 255 125 0 0 chrUextra 23972139 23972179 -5032477 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 767 22 56 0 0 chrUextra 23972192 23972228 -5032428 + AT_rich Low_complexity Low_complexity 1 36 0 1 767 455 17 0 49 chrUextra 23972254 23972315 -5032341 + NTS_DM Other Other 25 82 -158 1 767 587 0 14 0 chrUextra 23972315 23972389 -5032267 + Copia_LTR LTR Copia 1 75 -201 1 767 3023 3 0 0 chrUextra 23972489 23972834 -5031822 - LSU-rRNA_Dme rRNA rRNA -1768 2132 1788 1 767 2099 0 8 4 chrUextra 23972878 23973135 -5031521 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1531 1 767 5014 45 0 0 chrUextra 23973235 23973881 -5030775 + DMRT1B LINE R1 4224 4869 -314 1 767 1647 40 171 0 chrUextra 23974174 23974627 -5030029 - PROTOP_A DNA P 0 1105 576 1 767 2759 170 14 10 chrUextra 23974728 23975356 -5029300 - SAR_DM Satellite Satellite -516 956 326 1 767 1557 30 0 2 chrUextra 23975477 23976119 -5028537 + (ATAAG)n Simple_repeat Simple_repeat 1 640 0 1 767 1097 13 25 19 chrUextra 23976219 23976380 -5028276 + NTS_DM Other Other 79 240 0 1 767 1722 30 17 13 chrUextra 23976380 23976618 -5028038 + NTS_DM Other Other 1 239 -1 1 767 1494 60 17 25 chrUextra 23976619 23976860 -5027796 + NTS_DM Other Other 1 239 -1 1 767 324 0 0 0 chrUextra 23976965 23977001 -5027655 + (GAGAA)n Simple_repeat Simple_repeat 4 39 0 1 767 2476 191 10 8 chrUextra 23977711 23978324 -5026332 - SAR_DM Satellite Satellite -667 805 192 1 767 814 93 0 0 chrUextra 23978228 23978357 -5026299 + ARS406_DM Unknown Unknown 1 129 -224 1 767 4625 4 5 0 chrUextra 23978547 23979103 -5025553 - DOC LINE Jockey -6 4719 4161 1 767 2946 169 12 8 chrUextra 23979203 23979847 -5024809 + SAR_DM Satellite Satellite 255 901 -571 1 767 5540 0 1 5 chrUextra 23979949 23980595 -5024061 - SSU-rRNA_Dme rRNA rRNA -316 1679 1036 1 767 246 150 0 0 chrUextra 23980753 23980793 -5023863 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 767 246 150 0 0 chrUextra 23980845 23980885 -5023771 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 767 255 125 0 0 chrUextra 23980928 23980968 -5023688 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 767 22 56 0 0 chrUextra 23980981 23981017 -5023639 + AT_rich Low_complexity Low_complexity 1 36 0 1 767 870 9 0 27 chrUextra 23981043 23981155 -5023501 + NTS_DM Other Other 25 133 -107 1 767 1222 18 0 12 chrUextra 23981155 23981321 -5023335 + NTS_DM Other Other 38 201 -39 1 767 4954 50 0 1 chrUextra 23981441 23982087 -5022569 + FW_DM LINE Jockey 121 765 -3927 1 767 1071 0 0 0 chrUextra 23982714 23982833 -5021823 + (TTGTG)n Simple_repeat Simple_repeat 3 121 0 1 767 5321 9 0 0 chrUextra 23982933 23983579 -5021077 + STALKER4_I LTR Gypsy 3010 3655 -2875 1 767 4603 93 0 0 chrUextra 23983680 23984325 -5020331 - Gypsy12_I LTR Gypsy -1558 3988 3344 1 767 5249 20 16 0 chrUextra 23984425 23985069 -5019587 + FW_DM LINE Jockey 395 1048 -3644 1 767 5407 12 0 0 chrUextra 23985171 23985817 -5018839 - ROO_I LTR Pao -1669 6587 5942 1 95 5531 0 1 5 chrUextra 23985917 23986563 -5018093 + SSU-rRNA_Dme rRNA rRNA 848 1491 -504 1 768 229 89 44 0 chrUextra 23986665 23986710 -5017946 - FB4_DM DNA Tc1 -146 3943 3897 1 768 620 93 41 0 chrUextra 23986703 23986800 -5017856 - Baggins1 LINE LOA -626 4827 4727 1 768 27 29 0 0 chrUextra 23987039 23987073 -5017583 + AT_rich Low_complexity Low_complexity 1 34 0 1 768 5513 1 0 1 chrUextra 23987409 23988055 -5016601 - R1_DM LINE R1 -1869 3487 2843 1 768 5547 0 0 0 chrUextra 23988155 23988801 -5015855 + ROO_I LTR Pao 6000 6645 -1611 1 768 2893 170 17 9 chrUextra 23988902 23989545 -5015111 + SAR_DM Satellite Satellite 400 1047 -425 1 768 5025 22 1 3 chrUextra 23989647 23990293 -5014363 - QUASIMODO_I LTR Gypsy -4700 1360 716 1 768 2716 57 55 0 chrUextra 23990393 23990776 -5013880 + PROTOP_A DNA P 702 1105 0 1 768 507 0 0 0 chrUextra 23991139 23991197 -5013459 - LSU-rRNA_Dme rRNA rRNA -2055 1845 1788 1 768 4438 6 6 7 chrUextra 23991241 23991785 -5012871 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1246 1 768 855 19 0 0 chrUextra 23991885 23991992 -5012664 + QUASIMODO_I LTR Gypsy 5954 6060 0 1 768 4595 4 0 0 chrUextra 23991992 23992531 -5012125 + QUASIMODO_LTR LTR Gypsy 1 539 -119 1 768 912 169 10 10 chrUextra 23992631 23992653 -5012003 + SAR_DM Satellite Satellite 434 634 -836 1 768 1192 84 0 0 chrUextra 23992653 23992832 -5011824 - ARS406_DM Unknown Unknown -164 189 11 1 768 1116 83 0 0 chrUextra 23992832 23993000 -5011656 - ARS406_DM Unknown Unknown -171 182 15 1 768 1635 130 29 0 chrUextra 23993000 23993276 -5011380 + MAX_LTR LTR Pao 1 284 -37 1 768 28 48 0 0 chrUextra 23993381 23993423 -5011233 + AT_rich Low_complexity Low_complexity 1 42 0 1 768 32 0 0 0 chrUextra 23993751 23993783 -5010873 + AT_rich Low_complexity Low_complexity 1 32 0 1 768 904 0 0 9 chrUextra 23993915 23994023 -5010633 + SSU-rRNA_Dme rRNA rRNA 1 107 -1888 1 768 937 18 0 0 chrUextra 23994123 23994235 -5010421 - SSU-rRNA_Dme rRNA rRNA -1883 112 1 1 768 32 0 0 0 chrUextra 23994367 23994399 -5010257 + AT_rich Low_complexity Low_complexity 1 32 0 1 768 28 48 0 0 chrUextra 23994727 23994769 -5009887 + AT_rich Low_complexity Low_complexity 1 42 0 1 768 5324 8 1 1 chrUextra 23994869 23995515 -5009141 + ROO_I LTR Pao 1569 2214 -6042 1 768 4382 44 1 3 chrUextra 23995615 23996261 -5008395 - R1_DM LINE R1 -3736 1620 932 1 768 2475 185 14 26 chrUextra 23996361 23997004 -5007652 + SAR_DM Satellite Satellite 485 1119 -353 1 768 438 52 0 0 chrUextra 23997567 23997625 -5007031 + DMCR1A LINE CR1 1082 1139 -3331 1 768 949 32 0 24 chrUextra 23997626 23997752 -5006904 + BATUMI_I LTR Pao 5666 5788 -2175 1 768 719 90 9 0 chrUextra 23997853 23997964 -5006692 - R1_DM LINE R1 -5222 134 23 1 768 3789 21 117 0 chrUextra 23997985 23998499 -5006157 - R1_DM LINE R1 0 5356 4783 1 768 1224 60 0 0 chrUextra 23998949 23999150 -5005506 + (TTCTC)n Simple_repeat Simple_repeat 1 201 0 1 768 5345 22 2 0 chrUextra 23999346 23999991 -5004665 - R1_DM LINE R1 -2787 2569 1924 1 768 4861 50 8 0 chrUextra 24000091 24000737 -5003919 + TAHRE LINE telomeric 5763 6413 -4050 1 768 2685 193 5 9 chrUextra 24000838 24001482 -5003174 + SAR_DM Satellite Satellite 212 852 -620 1 768 1790 274 14 14 chrUextra 24001587 24002228 -5002428 + ROVER-I_DM LTR Gypsy 2576 3216 -3368 1 768 2973 27 0 36 chrUextra 24002329 24002714 -5001942 + Baggins1 LINE LOA 5083 5453 0 1 768 1620 0 0 0 chrUextra 24003178 24003416 -5001240 + (TTCTC)n Simple_repeat Simple_repeat 1 238 0 1 768 2939 165 13 9 chrUextra 24003821 24004453 -5000203 - SAR_DM Satellite Satellite -470 1002 369 1 768 5656 0 0 1 chrUextra 24004567 24005213 -4999443 + SSU-rRNA_Dme rRNA rRNA 268 912 -1083 1 768 5112 39 1 1 chrUextra 24005313 24005959 -4998697 + R1_DM LINE R1 889 1534 -3822 1 768 5384 1 0 0 chrUextra 24006059 24006705 -4997951 - ROO_I LTR Pao -2949 5307 4662 1 768 1740 119 81 48 chrUextra 24006814 24007298 -4997358 + BATUMI_I LTR Pao 270 769 -7194 1 768 683 92 0 18 chrUextra 24007339 24007450 -4997206 + BATUMI_I LTR Pao 749 857 -7106 1 768 2316 112 18 8 chrUextra 24008336 24008943 -4995713 - DMSAT6 Satellite Satellite -2 613 1 1 768 983 68 34 0 chrUextra 24009088 24009235 -4995421 - QUASIMODO_I LTR Gypsy -885 5175 5024 1 768 1699 0 0 0 chrUextra 24009235 24009433 -4995223 - Copia2_LTR_DM LTR Copia 0 198 1 1 768 1670 37 8 39 chrUextra 24009433 24009689 -4994967 - Copia2_I LTR Copia 0 4162 3915 1 768 5528 3 0 0 chrUextra 24009789 24010435 -4994221 + R1_DM LINE R1 1584 2229 -3127 1 768 2108 30 0 8 chrUextra 24010535 24010800 -4993856 + QUASIMODO_LTR LTR Gypsy 396 658 0 1 768 2866 11 11 0 chrUextra 24011281 24011630 -4993026 + DM176_LTR LTR Gypsy 155 507 0 1 768 2487 20 0 0 chrUextra 24011630 24011927 -4992729 + DM176_I LTR Gypsy 1 297 -6123 1 768 5566 3 2 0 chrUextra 24012028 24012673 -4991983 - R1_DM LINE R1 -571 4785 4140 1 768 4576 39 85 9 chrUextra 24012773 24013419 -4991237 - R1_DM LINE R1 -4274 1082 388 1 768 5175 19 3 11 chrUextra 24013519 24014165 -4990491 + FW_DM LINE Jockey 3982 4622 -70 1 768 1494 22 0 0 chrUextra 24014270 24014448 -4990208 + (CTTAT)n Simple_repeat Simple_repeat 3 180 0 1 768 1029 137 0 3 chrUextra 24014473 24014834 -4989822 + (CTTAT)n Simple_repeat Simple_repeat 1 359 0 1 768 228 161 0 0 chrUextra 24014849 24014911 -4989745 + (CTTAT)n Simple_repeat Simple_repeat 1 62 0 1 768 3968 24 4 2 chrUextra 24015011 24015511 -4989145 + G_DM LINE Jockey 3846 4346 0 1 768 1011 8 0 16 chrUextra 24015529 24015657 -4988999 + G_DM LINE Jockey 1 126 -4220 1 768 2493 189 5 27 chrUextra 24015766 24016403 -4988253 + SAR_DM Satellite Satellite 496 1118 -354 1 768 2841 37 3 16 chrUextra 24016503 24016883 -4987773 + BATUMI_I LTR Pao 1700 2074 -5889 1 768 215 157 42 14 chrUextra 24016889 24016960 -4987696 + (TA)n Simple_repeat Simple_repeat 2 74 0 1 768 90 10 0 0 chrUextra 24016960 24017057 -4987599 + AT_rich Low_complexity Low_complexity 1 97 0 1 768 638 33 43 22 chrUextra 24017057 24017149 -4987507 + BATUMI_I LTR Pao 7050 7143 -820 1 768 1098 36 0 0 chrUextra 24017249 24017386 -4987270 - FW_DM LINE Jockey -4555 137 1 1 768 3999 32 2 2 chrUextra 24017394 24017895 -4986761 + R1_DM LINE R1 1377 1877 -3479 1 768 2815 181 9 8 chrUextra 24017995 24018641 -4986015 + SAR_DM Satellite Satellite 287 933 -539 1 768 5628 0 0 1 chrUextra 24018741 24019387 -4985269 + SSU-rRNA_Dme rRNA rRNA 428 1072 -923 1 768 5217 22 0 1 chrUextra 24019487 24020133 -4984523 - STALKER4_I LTR Gypsy -4016 2514 1870 1 768 828 185 59 14 chrUextra 24020235 24020454 -4984202 - SAR_DM Satellite Satellite -708 764 536 1 768 240 23 67 22 chrUextra 24020457 24020502 -4984154 + (TTTAA)n Simple_repeat Simple_repeat 3 49 0 1 768 1602 177 32 11 chrUextra 24020502 24020879 -4983777 - SAR_DM Satellite Satellite -430 1042 658 1 768 5423 5 1 0 chrUextra 24020979 24021625 -4983031 + Gypsy4_I LTR Gypsy 5030 5676 -612 1 768 2000 46 4 8 chrUextra 24021725 24021990 -4982666 - Baggins1 LINE LOA -300 5153 4890 1 768 523 35 81 0 chrUextra 24022284 24022371 -4982285 - Jockey2 LINE Jockey 0 3428 3335 1 768 246 150 0 0 chrUextra 24022483 24022523 -4982133 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 768 22 56 0 0 chrUextra 24022621 24022657 -4981999 + AT_rich Low_complexity Low_complexity 1 36 0 1 768 3410 0 0 0 chrUextra 24022729 24023117 -4981539 - LSU-rRNA_Dme rRNA rRNA 0 3900 3513 1 768 2776 173 12 9 chrUextra 24023219 24023862 -4980794 - SAR_DM Satellite Satellite -641 831 187 1 768 21 0 0 0 chrUextra 24024153 24024174 -4980482 + AT_rich Low_complexity Low_complexity 1 21 0 1 768 4283 41 15 0 chrUextra 24024709 24025298 -4979358 + IDEFIX_I LTR Gypsy 3685 4282 -1346 1 768 473 60 0 0 chrUextra 24025288 24025355 -4979301 + IDEFIX_I LTR Gypsy 4509 4575 -1053 1 768 726 46 0 115 chrUextra 24025486 24025608 -4979048 - Baggins1 LINE LOA 0 5453 5346 1 768 27 29 0 0 chrUextra 24025931 24025965 -4978691 + AT_rich Low_complexity Low_complexity 1 34 0 1 768 4073 6 10 0 chrUextra 24026201 24026680 -4977976 - DMRT1B LINE R1 -1164 4019 3536 1 768 1503 0 0 0 chrUextra 24026680 24026847 -4977809 + (CACAA)n Simple_repeat Simple_repeat 1 167 0 1 768 2838 181 9 8 chrUextra 24026949 24027590 -4977066 + SAR_DM Satellite Satellite 212 853 -619 1 768 4634 0 0 45 chrUextra 24027745 24028339 -4976317 + LSU-rRNA_Dme rRNA rRNA 1 567 -3333 1 768 2288 118 12 11 chrUextra 24028439 24029085 -4975571 - DMSAT6 Satellite Satellite -34 646 1 1 768 5636 0 3 0 chrUextra 24029186 24029831 -4974825 + LSU-rRNA_Dme rRNA rRNA 2968 3614 -286 1 768 255 125 0 0 chrUextra 24029943 24029983 -4974673 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 768 246 150 0 0 chrUextra 24030026 24030066 -4974590 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 768 246 150 0 0 chrUextra 24030211 24030251 -4974405 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 768 22 56 0 0 chrUextra 24030256 24030292 -4974364 + AT_rich Low_complexity Low_complexity 1 36 0 1 768 1868 0 0 0 chrUextra 24030364 24030577 -4974079 - LSU-rRNA_Dme rRNA rRNA 0 3900 3688 1 768 2232 93 11 41 chrUextra 24030677 24031321 -4973335 + DMSAT6 Satellite Satellite 1 624 -235 1 768 2696 189 10 14 chrUextra 24031422 24032066 -4972590 - SAR_DM Satellite Satellite -1091 641 1 1 768 4503 4 0 0 chrUextra 24032167 24032697 -4971959 - DOC LINE Jockey -2690 2035 1506 1 768 737 28 9 45 chrUextra 24032695 24032807 -4971849 - Gypsy12_LTR LTR Gypsy -1226 1110 1003 1 768 2641 153 25 11 chrUextra 24032914 24033554 -4971102 - SAR_DM Satellite Satellite -208 1264 373 1 768 5404 0 2 2 chrUextra 24033657 24034302 -4970354 + DM412 LTR Gypsy 776 1420 -5477 1 768 21 0 0 0 chrUextra 24034425 24034446 -4970210 + AT_rich Low_complexity Low_complexity 1 21 0 1 768 2741 178 12 9 chrUextra 24035150 24035790 -4968866 - SAR_DM Satellite Satellite -549 923 282 1 768 3996 55 21 3 chrUextra 24035892 24036459 -4968197 + DM297_I LTR Gypsy 3775 4351 -1816 1 768 579 14 0 14 chrUextra 24036463 24036537 -4968119 + MDG1_I LTR Gypsy 5401 5473 -1123 1 768 2069 4 0 0 chrUextra 24036637 24036880 -4967776 - FW_DM LINE Jockey -3075 1617 1375 1 768 3439 5 0 0 chrUextra 24036879 24037282 -4967374 + DOC LINE Jockey 2790 3192 -1533 1 768 2827 182 6 8 chrUextra 24037386 24038024 -4966632 - SAR_DM Satellite Satellite -644 828 192 1 768 2417 186 16 21 chrUextra 24038127 24038772 -4965884 + SAR_DM Satellite Satellite 1 641 -396 1 768 601 333 8 7 chrUextra 24039107 24039446 -4965210 + GTWIN_I LTR Gypsy 3132 3539 -2882 1 768 1861 0 17 13 chrUextra 24039634 24039873 -4964783 + NTS_DM Other Other 1 240 0 1 768 1861 0 17 13 chrUextra 24039873 24040112 -4964544 + NTS_DM Other Other 1 240 0 1 768 1211 7 0 7 chrUextra 24040112 24040262 -4964394 + NTS_DM Other Other 1 149 -91 1 768 1436 77 0 0 chrUextra 24041114 24041310 -4963346 + Gypsy12_I LTR Gypsy 5351 5546 0 1 768 1639 195 52 28 chrUextra 24041310 24041737 -4962919 + Gypsy12_LTR LTR Gypsy 1 437 -1899 1 768 2640 119 29 21 chrUextra 24041962 24042497 -4962159 - Gypsy12A_LTR LTR Gypsy 0 2336 1804 1 768 255 287 58 84 chrUextra 24042653 24042843 -4961813 + Invader1_LTR LTR Gypsy 184 368 -55 1 768 2964 174 8 3 chrUextra 24043343 24043983 -4960673 + SAR_DM Satellite Satellite 237 879 -593 1 768 2523 178 64 9 chrUextra 24044087 24044732 -4959924 - SAR_DM Satellite Satellite -569 903 224 1 768 2749 176 9 9 chrUextra 24044832 24045464 -4959192 + SAR_DM Satellite Satellite 445 1076 -396 1 768 2695 89 0 0 chrUextra 24045578 24045995 -4958661 + S_DM DNA Tc1 1320 1736 0 1 768 2858 176 17 6 chrUextra 24046322 24046967 -4957689 - SAR_DM Satellite Satellite -399 1073 422 1 768 5215 23 2 0 chrUextra 24047068 24047712 -4956944 + DMCR1A LINE CR1 3701 4345 -125 1 768 22 56 0 0 chrUextra 24048039 24048075 -4956581 + AT_rich Low_complexity Low_complexity 1 36 0 1 768 875 19 0 0 chrUextra 24048351 24048457 -4956199 + LSU-rRNA_Dme rRNA rRNA 1 106 -3794 1 768 5346 6 2 0 chrUextra 24048561 24049202 -4955454 - ROO_I LTR Pao -4477 3779 3138 1 768 334 88 18 0 chrUextra 24049302 24049359 -4955297 - ARS406_DM Unknown Unknown -295 58 1 1 768 2831 176 5 11 chrUextra 24049319 24049947 -4954709 + SAR_DM Satellite Satellite 246 869 -603 1 768 2892 176 8 9 chrUextra 24050794 24051436 -4953220 + SAR_DM Satellite Satellite 293 933 -539 1 768 2612 10 0 0 chrUextra 24052282 24052586 -4952070 + Gypsy4_I LTR Gypsy 5985 6288 0 1 768 2197 18 10 44 chrUextra 24052586 24052883 -4951773 + Gypsy4_LTR LTR Gypsy 1 287 0 1 768 248 159 0 0 chrUextra 24052883 24052927 -4951729 - DNAREP1_DM LINE Penelope -106 488 445 1 768 3849 39 6 10 chrUextra 24053030 24053672 -4950984 - PROTOP_B DNA P -388 765 63 1 768 5539 6 0 0 chrUextra 24053772 24054417 -4950239 + DMRT1B LINE R1 36 680 -4503 1 768 5567 5 0 0 chrUextra 24054517 24055162 -4949494 + R1_DM LINE R1 4323 4967 -389 1 768 724 0 0 0 chrUextra 24055401 24055485 -4949171 + DM1731_LTR LTR Copia 1 84 -252 1 768 3618 0 2 0 chrUextra 24055488 24055907 -4948749 + DM1731_I LTR Copia 1 420 -3556 1 768 5363 14 0 0 chrUextra 24056007 24056652 -4948004 + G2_DM LINE Jockey 2106 2750 -352 1 768 4616 32 2 40 chrUextra 24056752 24057397 -4947259 + DOC2_DM LINE Jockey 631 1250 -3543 1 768 2211 186 14 6 chrUextra 24057497 24058142 -4946514 + SAR_DM Satellite Satellite 1 649 -677 1 768 2639 167 11 5 chrUextra 24058243 24058878 -4945778 - SAR_DM Satellite Satellite -645 638 1 1 768 724 34 0 0 chrUextra 24058987 24059075 -4945581 - LSU-rRNA_Dme rRNA rRNA -1173 2727 2640 1 768 4723 16 0 0 chrUextra 24059073 24059632 -4945024 - R1_DM LINE R1 0 5356 4798 1 768 5534 3 0 0 chrUextra 24059732 24060377 -4944279 - G2_DM LINE Jockey -1936 1166 522 1 768 2658 184 6 10 chrUextra 24060494 24061121 -4943535 - SAR_DM Satellite Satellite -396 1076 452 1 768 362 157 0 0 chrUextra 24061222 24061292 -4943364 - ARS406_DM Unknown Unknown -283 70 1 1 768 2802 186 6 5 chrUextra 24061230 24061867 -4942789 + SAR_DM Satellite Satellite 224 861 -611 1 768 4419 0 4 4 chrUextra 24061967 24062487 -4942169 + SSU-rRNA_Dme rRNA rRNA 1129 1648 -347 1 768 252 0 0 0 chrUextra 24062495 24062524 -4942132 + SSU-rRNA_Dme rRNA rRNA 1967 1995 0 1 768 5567 0 2 2 chrUextra 24062712 24063353 -4941303 - SSU-rRNA_Dme rRNA rRNA -52 1943 1303 1 768 5447 2 2 3 chrUextra 24063457 24064102 -4940554 + R1_DM LINE R1 3239 3882 -1474 1 768 26 30 0 0 chrUextra 24064206 24064239 -4940417 + AT_rich Low_complexity Low_complexity 1 33 0 1 768 23 68 0 0 chrUextra 24064279 24064323 -4940333 + AT_rich Low_complexity Low_complexity 1 44 0 1 768 21 89 0 0 chrUextra 24064361 24064417 -4940239 + AT_rich Low_complexity Low_complexity 1 56 0 1 768 1158 122 0 0 chrUextra 24064949 24065275 -4939381 + (TA)n Simple_repeat Simple_repeat 1 326 0 1 768 856 157 35 105 chrUextra 24065363 24065591 -4939065 + DMLTR5 LTR Gypsy 40 251 -15 1 768 463 15 14 57 chrUextra 24065692 24065762 -4938894 - NTS_DM Other Other -149 91 25 1 768 21 57 0 0 chrUextra 24065788 24065823 -4938833 + AT_rich Low_complexity Low_complexity 1 35 0 1 768 1252 18 0 6 chrUextra 24065823 24065988 -4938668 - NTS_DM Other Other -39 201 38 1 768 870 9 0 27 chrUextra 24065988 24066100 -4938556 - NTS_DM Other Other -107 133 25 1 768 1252 18 0 6 chrUextra 24066152 24066317 -4938339 - NTS_DM Other Other -39 201 38 1 768 3055 147 5 9 chrUextra 24066438 24066996 -4937660 + TAHRE LINE telomeric 9897 10452 -11 1 768 770 0 0 0 chrUextra 24066993 24067082 -4937574 + TAHRE LINE telomeric 3938 4026 -6437 1 768 2794 164 34 12 chrUextra 24067182 24067825 -4936831 - SAR_DM Satellite Satellite -470 1002 346 1 768 2403 91 12 37 chrUextra 24067928 24068572 -4936084 - DMSAT6 Satellite Satellite -13 627 1 1 768 453 0 0 0 chrUextra 24068672 24068724 -4935932 + LSU-rRNA_Dme rRNA rRNA 2530 2581 -1319 1 768 5131 3 0 2 chrUextra 24068725 24069317 -4935339 + R2_DM LINE R2 28 618 -2989 1 768 1474 21 0 10 chrUextra 24069417 24069611 -4935045 - NTS_DM Other Other -48 192 1 1 768 1756 17 17 17 chrUextra 24069611 24069851 -4934805 - NTS_DM Other Other 0 240 1 1 768 1438 15 20 20 chrUextra 24069851 24070054 -4934602 - NTS_DM Other Other 0 240 38 1 768 2317 0 4 0 chrUextra 24070162 24070428 -4934228 + SSU-rRNA_Dme rRNA rRNA 1729 1995 0 1 768 21 89 0 0 chrUextra 24070447 24070503 -4934153 + AT_rich Low_complexity Low_complexity 1 56 0 1 768 973 32 25 25 chrUextra 24070907 24071066 -4933590 + NTS_DM Other Other 82 240 0 1 768 1734 21 17 17 chrUextra 24071066 24071306 -4933350 + NTS_DM Other Other 1 240 0 1 768 1712 25 17 17 chrUextra 24071306 24071546 -4933110 + NTS_DM Other Other 1 240 0 1 768 5450 2 3 5 chrUextra 24071652 24072297 -4932359 + LSU-rRNA_Dme rRNA rRNA 758 1401 -2499 1 768 2740 148 79 38 chrUextra 24072397 24073028 -4931628 + TART LINE telomeric 9695 10351 -4126 1 768 2807 186 3 8 chrUextra 24073148 24073787 -4930869 - SAR_DM Satellite Satellite -425 1047 412 1 768 5063 33 28 0 chrUextra 24073887 24074532 -4930124 + R1_DM LINE R1 3052 3714 -1642 1 768 5559 5 0 0 chrUextra 24074632 24075277 -4929379 - IDEFIX_I LTR Gypsy -3423 2205 1561 1 768 5147 12 47 0 chrUextra 24075377 24076022 -4928634 - R1_DM LINE R1 -4386 970 296 1 768 2087 157 12 45 chrUextra 24076123 24076684 -4927972 - HETA LINE telomeric -5500 581 39 1 768 319 214 0 18 chrUextra 24076653 24076767 -4927889 - HETA LINE telomeric -5725 356 245 1 768 5353 17 0 0 chrUextra 24076873 24077512 -4927144 - R1_DM LINE R1 -760 4596 3958 1 768 872 46 0 0 chrUextra 24078357 24078466 -4926190 - R1_DM LINE R1 -861 4495 4387 1 768 4341 39 0 0 chrUextra 24078463 24079002 -4925654 - R1_DM LINE R1 -2010 3346 2808 1 768 1429 59 0 0 chrUextra 24079561 24079747 -4924909 + PROTOP DNA P 74 259 -4221 1 768 4645 11 62 0 chrUextra 24079847 24080492 -4924164 + SSU-rRNA_Dme rRNA rRNA 430 1114 -881 1 768 2985 164 20 6 chrUextra 24080592 24081237 -4923419 - SAR_DM Satellite Satellite -443 1029 376 1 768 771 0 0 11 chrUextra 24081337 24081429 -4923227 - R1_DM LINE R1 -464 4892 4802 1 768 549 0 0 0 chrUextra 24081441 24081504 -4923152 - R1_DM LINE R1 0 5356 5294 1 768 4182 2 0 0 chrUextra 24081502 24081982 -4922674 - LSU-rRNA_Dme rRNA rRNA -1244 2656 2177 1 768 4711 39 23 2 chrUextra 24082086 24082727 -4921929 - R1_DM LINE R1 -4105 1251 597 1 768 2665 168 9 10 chrUextra 24082827 24083405 -4921251 + SAR_DM Satellite Satellite 418 994 -478 1 768 515 43 0 0 chrUextra 24083403 24083472 -4921184 - ARS406_DM Unknown Unknown -171 182 114 1 768 2798 180 9 9 chrUextra 24083572 24084217 -4920439 - SAR_DM Satellite Satellite -399 1073 429 1 768 5572 2 0 0 chrUextra 24084317 24084962 -4919694 - FW_DM LINE Jockey -245 4447 3803 1 768 736 31 0 0 chrUextra 24085062 24085158 -4919498 - IDEFIX_LTR LTR Gypsy -498 96 1 1 768 551 2 125 9 chrUextra 24085158 24085698 -4918958 + (TA)n Simple_repeat Simple_repeat 1 602 0 1 768 5296 12 8 0 chrUextra 24086552 24087197 -4917459 + R1_DM LINE R1 257 906 -4450 1 768 2303 107 17 12 chrUextra 24087297 24087940 -4916716 - DMSAT6 Satellite Satellite -28 645 1 1 768 5202 30 2 0 chrUextra 24088045 24088687 -4915969 + R1_DM LINE R1 2392 3034 -2322 1 768 5044 9 73 0 chrUextra 24088787 24089432 -4915224 - STALKER4_I LTR Gypsy -2716 3814 3123 1 768 4933 23 11 6 chrUextra 24089532 24090176 -4914480 - PROTOP_A DNA P -308 797 151 1 768 1104 8 0 0 chrUextra 24090280 24090405 -4914251 + (CAAGA)n Simple_repeat Simple_repeat 4 128 0 1 768 2370 94 30 33 chrUextra 24091025 24091667 -4912989 - DMSAT6 Satellite Satellite -165 640 1 1 768 2613 176 40 14 chrUextra 24091767 24092412 -4912244 - SAR_DM Satellite Satellite -469 1003 342 1 768 204 40 0 0 chrUextra 24092792 24092817 -4911839 + (TTG)n Simple_repeat Simple_repeat 2 26 0 1 768 1118 36 0 0 chrUextra 24093017 24093157 -4911499 + PROTOP_B DNA P 74 213 -940 1 768 5207 30 5 0 chrUextra 24093257 24093902 -4910754 - R1_DM LINE R1 -2328 3028 2381 1 768 4409 51 64 3 chrUextra 24094002 24094646 -4910010 - MDG1_I LTR Gypsy -4779 1817 1135 1 768 2019 176 9 9 chrUextra 24094750 24095391 -4909265 - SAR_DM Satellite Satellite -706 641 1 1 768 488 119 36 0 chrUextra 24095641 24095725 -4908931 + NTS_DM Other Other 4 90 -150 1 768 28 48 0 0 chrUextra 24095998 24096040 -4908616 + AT_rich Low_complexity Low_complexity 1 42 0 1 768 2694 171 17 17 chrUextra 24096242 24096880 -4907776 + SAR_DM Satellite Satellite 321 958 -514 1 768 2773 245 47 21 chrUextra 24096982 24098371 -4906285 - SAR_DM Satellite Satellite -620 1425 1 1 768 2946 172 8 8 chrUextra 24099217 24099860 -4904796 - SAR_DM Satellite Satellite -484 988 346 1 768 318 26 0 0 chrUextra 24099962 24100001 -4904655 + (TTCTC)n Simple_repeat Simple_repeat 4 42 0 1 768 4449 2 6 7 chrUextra 24100707 24101247 -4903409 + LSU-rRNA_Dme rRNA rRNA 1250 1788 -2112 1 768 531 0 0 0 chrUextra 24101291 24101352 -4903304 + LSU-rRNA_Dme rRNA rRNA 1788 1848 -2052 1 768 1620 37 0 0 chrUextra 24101452 24101778 -4902878 + (GAGAA)n Simple_repeat Simple_repeat 1 326 0 1 768 1423 212 99 113 chrUextra 24102225 24102842 -4901814 + Gypsy3_I LTR Gypsy 75 682 -5495 1 768 669 179 7 14 chrUextra 24103002 24103144 -4901512 - HETRP_DM Satellite Satellite -203 1669 1529 1 768 477 217 8 16 chrUextra 24103277 24103399 -4901257 - HETRP_DM Satellite Satellite -203 1669 1549 1 768 192 40 0 0 chrUextra 24103399 24103424 -4901232 + (TC)n Simple_repeat Simple_repeat 2 26 0 1 768 2646 172 33 23 chrUextra 24103687 24104330 -4900326 - SAR_DM Satellite Satellite -629 843 195 1 768 2477 68 9 38 chrUextra 24104432 24105077 -4899579 + DMSAT6 Satellite Satellite 1 626 -64 1 768 5180 26 8 0 chrUextra 24105177 24105822 -4898834 + MAX_I LTR Pao 1572 2221 -5693 1 768 25 0 0 0 chrUextra 24105924 24105949 -4898707 + AT_rich Low_complexity Low_complexity 1 25 0 1 768 32 0 0 0 chrUextra 24106277 24106309 -4898347 + AT_rich Low_complexity Low_complexity 1 32 0 1 768 1064 0 0 8 chrUextra 24106441 24106567 -4898089 + SSU-rRNA_Dme rRNA rRNA 1 125 -1870 1 768 1003 21 0 7 chrUextra 24106669 24106812 -4897844 + NTS_DM Other Other 60 201 -39 1 768 870 9 0 27 chrUextra 24106864 24106976 -4897680 + NTS_DM Other Other 25 133 -107 1 768 1252 18 0 6 chrUextra 24106976 24107141 -4897515 + NTS_DM Other Other 38 201 -39 1 768 848 18 0 27 chrUextra 24107193 24107305 -4897351 + NTS_DM Other Other 25 133 -107 1 768 2795 159 40 16 chrUextra 24107412 24108057 -4896599 - SAR_DM Satellite Satellite -439 1033 373 1 768 5546 2 0 2 chrUextra 24108157 24108802 -4895854 + DOC LINE Jockey 1914 2557 -2168 1 768 255 125 0 0 chrUextra 24108988 24109028 -4895628 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 768 22 56 0 0 chrUextra 24109041 24109077 -4895579 + AT_rich Low_complexity Low_complexity 1 36 0 1 768 870 9 0 27 chrUextra 24109103 24109215 -4895441 + NTS_DM Other Other 25 133 -107 1 768 1252 18 0 6 chrUextra 24109215 24109380 -4895276 + NTS_DM Other Other 38 201 -39 1 768 848 18 0 27 chrUextra 24109432 24109544 -4895112 + NTS_DM Other Other 25 133 -107 1 768 5347 0 2 0 chrUextra 24109647 24110292 -4894364 - TABOR_I LTR Gypsy -4778 1558 913 1 768 5590 0 0 0 chrUextra 24110392 24111037 -4893619 - ROO_I LTR Pao -6457 1799 1155 1 768 4432 27 93 6 chrUextra 24111137 24111782 -4892874 - PROTOP DNA P -3621 859 159 1 768 241 125 0 0 chrUextra 24111913 24111953 -4892703 - HETRP_DM Satellite Satellite -315 1557 1518 1 768 373 194 87 10 chrUextra 24112087 24112191 -4892465 + DNAREP1_DM LINE Penelope 67 178 -416 1 768 446 101 218 20 chrUextra 24112426 24112527 -4892129 + ROVER-LTR_DM LTR Gypsy 1 121 -246 1 768 4508 71 3 14 chrUextra 24112627 24113269 -4891387 - R1_DM LINE R1 -4676 680 46 1 768 420 37 0 0 chrUextra 24113374 24113428 -4891228 + (TCTA)n Simple_repeat Simple_repeat 2 55 0 1 768 1554 26 0 3 chrUextra 24113439 24114012 -4890644 + (TCTA)n Simple_repeat Simple_repeat 1 570 0 1 768 4228 112 2 6 chrUextra 24114117 24114762 -4889894 + Gypsy12_I LTR Gypsy 2248 2889 -2657 1 768 2395 81 16 59 chrUextra 24114862 24115507 -4889149 + DMSAT6 Satellite Satellite 1 617 -25 1 768 763 20 0 29 chrUextra 24115607 24115709 -4888947 - NTS_DM Other Other -117 123 25 1 768 1654 5 0 0 chrUextra 24115761 24115962 -4888694 - NTS_DM Other Other -39 201 1 1 768 1805 4 17 17 chrUextra 24115962 24116202 -4888454 - NTS_DM Other Other 0 240 1 1 768 247 21 80 60 chrUextra 24116202 24116252 -4888404 - NTS_DM Other Other 0 240 190 1 768 586 293 28 23 chrUextra 24116354 24116707 -4887949 + XDMR Unknown Unknown 1 355 -6 1 768 566 301 41 43 chrUextra 24116707 24116931 -4887725 - SAR_DM Satellite Satellite -758 575 1 1 768 787 102 0 0 chrUextra 24117097 24117225 -4887431 - ARS406_DM Unknown Unknown -225 128 1 1 11 2589 188 7 8 chrUextra 24117129 24117742 -4886914 + SAR_DM Satellite Satellite 192 803 -669 1 769 5150 30 0 3 chrUextra 24117842 24118485 -4886171 + R1_DM LINE R1 2545 3185 -2171 1 769 4268 53 2 57 chrUextra 24118587 24119232 -4885424 + BATUMI_I LTR Pao 2304 2912 -5051 1 769 1371 39 0 0 chrUextra 24119337 24119515 -4885141 + (TTCTC)n Simple_repeat Simple_repeat 1 178 0 1 769 1350 80 0 0 chrUextra 24119526 24119971 -4884685 + (CATCT)n Simple_repeat Simple_repeat 1 445 0 1 769 815 33 0 8 chrUextra 24120077 24120199 -4884457 + NTS_DM Other Other 81 201 -39 1 769 870 9 0 27 chrUextra 24120251 24120363 -4884293 + NTS_DM Other Other 25 133 -107 1 769 1252 18 0 6 chrUextra 24120363 24120528 -4884128 + NTS_DM Other Other 38 201 -39 1 769 21 57 0 0 chrUextra 24120528 24120563 -4884093 + AT_rich Low_complexity Low_complexity 1 35 0 1 769 832 9 9 27 chrUextra 24120589 24120700 -4883956 + NTS_DM Other Other 25 133 -107 1 769 689 298 50 46 chrUextra 24120837 24121152 -4883504 + Gypsy_DS LTR Gypsy 2372 3096 -4426 1 769 1353 52 24 0 chrUextra 24121152 24121365 -4883291 + TLD2 Unknown Unknown 1 218 0 1 769 689 298 50 46 chrUextra 24121365 24121467 -4883189 + Gypsy_DS LTR Gypsy 3097 3335 -4187 1 769 5284 14 40 0 chrUextra 24121567 24122211 -4882445 - R1_DM LINE R1 -2945 2411 1742 1 769 1637 5 5 0 chrUextra 24122311 24122507 -4882149 - DM1731_I LTR Copia -3779 197 1 1 769 2715 33 0 0 chrUextra 24122507 24122843 -4881813 - DM1731_LTR LTR Copia 0 336 1 1 769 677 97 9 0 chrUextra 24122843 24122955 -4881701 + ARS406_DM Unknown Unknown 13 125 -228 1 769 2734 162 52 11 chrUextra 24123058 24123699 -4880957 - SAR_DM Satellite Satellite -425 1047 381 1 769 26 93 0 0 chrUextra 24123983 24124058 -4880598 + AT_rich Low_complexity Low_complexity 1 75 0 1 769 32 0 0 0 chrUextra 24124152 24124184 -4880472 + AT_rich Low_complexity Low_complexity 1 32 0 1 769 1083 16 0 0 chrUextra 24124316 24124443 -4880213 + SSU-rRNA_Dme rRNA rRNA 1 127 -1868 1 769 1850 4 17 13 chrUextra 24124567 24124806 -4879850 + NTS_DM Other Other 1 240 0 1 769 1861 0 17 13 chrUextra 24124806 24125045 -4879611 + NTS_DM Other Other 1 240 0 1 769 1176 0 7 0 chrUextra 24125045 24125187 -4879469 + NTS_DM Other Other 1 143 -97 1 769 5205 14 6 0 chrUextra 24125287 24125930 -4878726 + ROO_I LTR Pao 3315 3961 -4295 1 769 1176 0 0 0 chrUextra 24126043 24126178 -4878478 + 5S_DM RNA RNA 1 135 0 1 769 1176 0 0 0 chrUextra 24126405 24126540 -4878116 + 5S_DM RNA RNA 1 135 0 1 769 2134 8 0 0 chrUextra 24126775 24127022 -4877634 + Invader1_LTR LTR Gypsy 177 423 0 1 769 3193 33 0 0 chrUextra 24127022 24127419 -4877237 + PROTOP_A DNA P 700 1096 -9 1 769 5126 31 12 0 chrUextra 24127519 24128163 -4876493 + R1_DM LINE R1 2504 3155 -2201 1 769 5443 12 0 0 chrUextra 24128263 24128907 -4875749 - DMRT1B LINE R1 -2923 2260 1617 1 769 5600 2 0 2 chrUextra 24129007 24129651 -4875005 + LSU-rRNA_Dme rRNA rRNA 2571 3213 -687 1 769 1915 264 0 0 chrUextra 24129751 24130282 -4874374 - G6_DM LINE Jockey -783 1259 729 1 769 5614 0 0 2 chrUextra 24130495 24131139 -4873517 + LSU-rRNA_Dme rRNA rRNA 2715 3357 -543 1 769 2629 180 12 24 chrUextra 24131244 24131882 -4872774 - SAR_DM Satellite Satellite -361 1111 481 1 769 21 95 0 0 chrUextra 24131985 24132048 -4872608 + AT_rich Low_complexity Low_complexity 1 63 0 1 769 34 24 0 0 chrUextra 24132261 24132302 -4872354 + AT_rich Low_complexity Low_complexity 1 41 0 1 769 5493 5 2 0 chrUextra 24132727 24133371 -4871285 - Invader1_I LTR Gypsy -71 3115 2471 1 769 5268 26 3 0 chrUextra 24133473 24134115 -4870541 - R1_DM LINE R1 -337 5019 4376 1 769 5624 0 3 0 chrUextra 24134215 24134859 -4869797 - LSU-rRNA_Dme rRNA rRNA -109 3791 3146 1 769 5443 3 2 2 chrUextra 24134959 24135603 -4869053 + Invader3_I LTR Gypsy 2941 3584 -1304 1 769 4719 17 0 2 chrUextra 24135703 24136279 -4868377 + FW_DM LINE Jockey 4118 4692 0 1 769 541 44 0 0 chrUextra 24136279 24136347 -4868309 - R1_DM LINE R1 -3947 1409 1342 1 769 2917 175 6 9 chrUextra 24136451 24137087 -4867569 + SAR_DM Satellite Satellite 246 879 -593 1 769 2786 12 0 0 chrUextra 24137191 24137530 -4867126 - R1_DM LINE R1 -4503 853 515 1 769 2652 3 7 0 chrUextra 24137527 24137835 -4866821 - LSU-rRNA_Dme rRNA rRNA -1252 2648 2339 1 769 2815 169 12 11 chrUextra 24137935 24138574 -4866082 - SAR_DM Satellite Satellite -603 869 230 1 769 1680 0 14 22 chrUextra 24138679 24138902 -4865754 - NTS_DM Other Other -19 221 1 1 769 1861 0 17 13 chrUextra 24138902 24139141 -4865515 - NTS_DM Other Other 0 240 1 1 769 1243 11 22 22 chrUextra 24139141 24139323 -4865333 - NTS_DM Other Other 0 240 59 1 769 2851 174 9 9 chrUextra 24139423 24140067 -4864589 - SAR_DM Satellite Satellite -399 1073 430 1 769 5347 2 0 0 chrUextra 24140167 24140799 -4863857 - LSU-rRNA_Dme rRNA rRNA -3051 849 218 1 769 2751 189 6 6 chrUextra 24140912 24141555 -4863101 + SAR_DM Satellite Satellite 237 879 -593 1 769 3049 160 11 9 chrUextra 24141655 24142299 -4862357 - SAR_DM Satellite Satellite -451 1021 377 1 769 1930 177 12 9 chrUextra 24142399 24143038 -4861618 - SAR_DM Satellite Satellite -443 640 1 1 769 5165 17 0 8 chrUextra 24143143 24143784 -4860872 + FW_DM LINE Jockey 1655 2290 -2402 1 769 5096 33 6 0 chrUextra 24143887 24144531 -4860125 - MDG1_I LTR Gypsy -2477 4119 3472 1 769 1635 5 18 14 chrUextra 24144631 24144848 -4859808 + NTS_DM Other Other 23 240 0 1 769 1847 4 17 13 chrUextra 24144848 24145087 -4859569 + NTS_DM Other Other 1 240 0 1 769 1301 6 0 18 chrUextra 24145087 24145252 -4859404 + NTS_DM Other Other 1 162 -78 1 769 2079 157 147 29 chrUextra 24145376 24146017 -4858639 - TART LINE telomeric -4751 9726 9040 1 769 576 0 0 0 chrUextra 24146119 24146186 -4858470 + LSU-rRNA_Dme rRNA rRNA 2515 2581 -1319 1 769 4936 7 0 2 chrUextra 24146184 24146763 -4857893 + R2_DM LINE R2 2558 3135 -472 1 769 1167 7 0 0 chrUextra 24146960 24147095 -4857561 + 5S_DM RNA RNA 1 135 0 1 769 1143 15 0 0 chrUextra 24147326 24147461 -4857195 + 5S_DM RNA RNA 1 135 0 1 769 2980 162 9 9 chrUextra 24147608 24148249 -4856407 + SAR_DM Satellite Satellite 293 933 -539 1 769 2614 184 7 8 chrUextra 24148351 24148958 -4855698 - SAR_DM Satellite Satellite -672 800 195 1 769 816 100 0 0 chrUextra 24148865 24148995 -4855661 + ARS406_DM Unknown Unknown 1 130 -223 1 769 4805 30 25 3 chrUextra 24149095 24149739 -4854917 - IDEFIX_I LTR Gypsy -674 4954 4297 1 769 250 33 0 0 chrUextra 24149892 24149922 -4854734 + Baggins1 LINE LOA 4727 4756 -697 1 769 708 97 241 0 chrUextra 24149930 24150075 -4854581 + FB4_DM DNA Tc1 3908 4087 -2 1 769 5381 16 2 5 chrUextra 24150583 24151227 -4853429 + Gypsy4_I LTR Gypsy 626 1267 -5021 1 769 5421 16 2 0 chrUextra 24151332 24151971 -4852685 - Gypsy6_I LTR Gypsy -1643 5369 4730 1 769 4018 98 87 0 chrUextra 24152071 24152715 -4851941 - TART LINE telomeric -12903 1574 875 1 769 2877 171 17 6 chrUextra 24152817 24153458 -4851198 + SAR_DM Satellite Satellite 238 885 -587 1 769 1770 167 15 10 chrUextra 24153559 24153958 -4850698 - SAR_DM Satellite Satellite -673 799 399 1 769 370 57 19 0 chrUextra 24153974 24154027 -4850629 + ARS406_DM Unknown Unknown 136 189 -164 1 769 1081 135 14 14 chrUextra 24153983 24154201 -4850455 - SAR_DM Satellite Satellite -614 858 641 1 769 1158 122 0 0 chrUextra 24154313 24154493 -4850163 + (TA)n Simple_repeat Simple_repeat 1 180 0 1 769 3772 16 0 0 chrUextra 24154494 24154947 -4849709 + DM176_LTR LTR Gypsy 1 453 -54 1 769 2667 54 109 4 chrUextra 24155048 24155676 -4848980 + PROTOP_B DNA P 241 983 -170 1 769 2978 11 0 0 chrUextra 24155794 24156145 -4848511 + PROTOP DNA P 4130 4480 0 1 769 2420 24 0 0 chrUextra 24156145 24156435 -4848221 - R1_DM LINE R1 -2810 2546 2257 1 769 4946 51 0 0 chrUextra 24156535 24157179 -4847477 + IDEFIX_I LTR Gypsy 2218 2861 -2767 1 769 3400 2 0 5 chrUextra 24157279 24157676 -4846980 - SSU-rRNA_Dme rRNA rRNA -1600 395 1 1 769 32 0 0 0 chrUextra 24157808 24157840 -4846816 + AT_rich Low_complexity Low_complexity 1 32 0 1 769 2621 158 9 6 chrUextra 24158027 24158667 -4845989 - SAR_DM Satellite Satellite -514 641 1 1 769 2083 82 1 41 chrUextra 24158770 24159411 -4845245 - DMSAT6 Satellite Satellite -151 615 1 1 769 5469 0 3 3 chrUextra 24159511 24160155 -4844501 + R1_DM LINE R1 4046 4689 -667 1 769 596 183 154 122 chrUextra 24160999 24161342 -4843314 + TIRANT_LTR LTR Gypsy 11 364 -53 1 769 741 265 62 0 chrUextra 24161424 24161635 -4843021 + Gypsy2_I LTR Gypsy 1311 1534 -4601 1 769 2779 179 8 9 chrUextra 24161743 24162381 -4842275 - SAR_DM Satellite Satellite -641 831 195 1 769 1382 80 132 87 chrUextra 24162495 24162783 -4841873 - STALKER4_LTR LTR Gypsy -33 369 69 1 769 563 300 14 14 chrUextra 24162917 24163130 -4841526 - Invader2_I LTR Gypsy -641 3951 3739 1 769 1446 12 0 0 chrUextra 24163231 24163400 -4841256 + TRANSPAC_LTR LTR Gypsy 162 330 0 1 769 4021 6 2 4 chrUextra 24163400 24163875 -4840781 - SSU-rRNA_Dme rRNA rRNA -555 1440 967 1 769 5342 9 5 2 chrUextra 24163975 24164617 -4840039 - G_DM LINE Jockey -2405 1941 1298 1 769 4890 18 2 36 chrUextra 24165463 24166107 -4838549 + G_DM LINE Jockey 3449 4070 -276 1 769 699 93 0 0 chrUextra 24166207 24166325 -4838331 + (CAAGA)n Simple_repeat Simple_repeat 5 122 0 1 769 5858 0 0 2 chrUextra 24166951 24167595 -4837061 + SSU-rRNA_Dme rRNA rRNA 486 1128 -867 1 769 1582 20 92 0 chrUextra 24168144 24168339 -4836317 + PROTOP_B DNA P 1 213 -940 1 769 4272 83 8 25 chrUextra 24168439 24169082 -4835574 + CIRCE LINE Composite 4349 4980 -1376 1 769 2765 243 47 31 chrUextra 24169183 24170563 -4834093 + SAR_DM Satellite Satellite 1 1401 -581 1 769 31 112 0 0 chrUextra 24170683 24170826 -4833830 + AT_rich Low_complexity Low_complexity 1 143 0 1 769 2574 207 8 8 chrUextra 24171416 24172049 -4832607 - SAR_DM Satellite Satellite -645 827 195 1 769 488 17 0 17 chrUextra 24172159 24172218 -4832438 - NTS_DM Other Other -182 58 1 1 769 1813 21 17 17 chrUextra 24172218 24172458 -4832198 - NTS_DM Other Other 0 240 1 1 769 1835 17 17 17 chrUextra 24172458 24172698 -4831958 - NTS_DM Other Other 0 240 1 1 769 636 30 38 38 chrUextra 24172698 24172803 -4831853 - NTS_DM Other Other 0 240 136 1 769 957 296 65 29 chrUextra 24172912 24173541 -4831115 - SAR_DM Satellite Satellite -443 1029 378 1 769 2689 164 23 26 chrUextra 24173654 24175020 -4829636 + DMSAT6 Satellite Satellite 1 1361 -3 1 769 5529 20 0 2 chrUextra 24175138 24175779 -4828877 + ROO_I LTR Pao 2336 2975 -5281 1 769 3193 154 14 11 chrUextra 24175880 24176523 -4828133 - SAR_DM Satellite Satellite -456 1016 372 1 769 3000 168 19 10 chrUextra 24176635 24177262 -4827394 + SAR_DM Satellite Satellite 326 958 -514 1 769 5331 34 5 2 chrUextra 24177367 24178011 -4826645 + R1_DM LINE R1 4487 5132 -224 1 769 5430 28 6 3 chrUextra 24178112 24178755 -4825901 + CIRCE LINE Composite 2799 3443 -2913 1 769 5859 0 0 2 chrUextra 24178855 24179499 -4825157 - DOC LINE Jockey -534 4191 3549 1 769 816 10 10 0 chrUextra 24179599 24179696 -4824960 + NTS_DM Other Other 36 133 -107 1 769 1304 18 0 6 chrUextra 24179696 24179861 -4824795 + NTS_DM Other Other 38 201 -39 1 769 907 9 0 27 chrUextra 24179913 24180025 -4824631 + NTS_DM Other Other 25 133 -107 1 769 1304 18 0 6 chrUextra 24180025 24180190 -4824466 + NTS_DM Other Other 38 201 -39 1 769 1693 10 0 68 chrUextra 24180346 24180567 -4824089 + DM176_LTR LTR Gypsy 78 283 -224 1 769 2104 20 16 0 chrUextra 24180568 24180821 -4823835 + DM176_LTR LTR Gypsy 251 507 0 1 769 216 0 0 0 chrUextra 24180823 24180847 -4823809 + (TA)n Simple_repeat Simple_repeat 1 24 0 1 769 1201 0 7 0 chrUextra 24180847 24180987 -4823669 - QUASIMODO_LTR LTR Gypsy 0 658 518 1 769 5360 14 16 0 chrUextra 24181088 24181731 -4822925 + ACCORD2_I LTR Gypsy 3504 4156 -3056 1 769 1324 24 6 40 chrUextra 24181831 24182005 -4822651 + G5A_DM LINE Jockey 2671 2838 -3 1 769 493 284 123 27 chrUextra 24182031 24182465 -4822191 - BURDOCK_I LTR Gypsy -4008 1852 1193 1 769 1145 273 26 22 chrUextra 24182582 24183061 -4821595 - ROVER-I_DM LTR Gypsy -5362 1222 383 1 769 5614 20 0 0 chrUextra 24183319 24183963 -4820693 + R1_DM LINE R1 1906 2549 -2807 1 769 2919 173 11 12 chrUextra 24184068 24184707 -4819949 - SAR_DM Satellite Satellite -396 1076 439 1 769 5451 30 5 0 chrUextra 24185551 24186195 -4818461 + R1_DM LINE R1 2865 3511 -1845 1 769 3709 59 40 2 chrUextra 24186319 24186928 -4817728 - PROTOP_A DNA P 0 1105 570 1 769 3019 177 11 8 chrUextra 24187039 24187681 -4816975 - SAR_DM Satellite Satellite -450 1022 379 1 769 904 51 0 0 chrUextra 24188529 24188646 -4816010 + ARS406_DM Unknown Unknown 73 189 -164 1 769 2203 190 77 34 chrUextra 24188543 24189170 -4815486 - SAR_DM Satellite Satellite -203 1269 616 1 769 3877 2 0 2 chrUextra 24189380 24189809 -4814847 + ROO_LTR LTR Pao 1 428 0 1 769 774 12 0 0 chrUextra 24189809 24189895 -4814761 + ROO_I LTR Pao 1 86 -8170 1 769 5469 28 3 0 chrUextra 24190016 24190659 -4813997 - R1_DM LINE R1 -17 5339 4695 1 769 1183 20 0 0 chrUextra 24190759 24190910 -4813746 + G2_DM LINE Jockey 2950 3100 -2 1 769 2080 178 7 16 chrUextra 24190910 24191343 -4813313 - HETA LINE telomeric -2198 3883 3455 1 769 237 200 16 32 chrUextra 24191341 24191403 -4813253 - HETA LINE telomeric -602 5479 5419 1 769 5088 27 28 8 chrUextra 24191503 24192147 -4812509 - PROTOP DNA P -3776 704 48 1 769 2994 185 8 8 chrUextra 24192248 24192891 -4811765 + SAR_DM Satellite Satellite 272 914 -558 1 769 3012 18 6 19 chrUextra 24193735 24194379 -4810277 + HETRP_DM Satellite Satellite 1 636 -1456 1 769 4162 11 0 0 chrUextra 24194479 24194954 -4809702 + G2_DM LINE Jockey 2628 3102 0 1 769 1272 12 18 0 chrUextra 24194953 24195123 -4809533 - STALKER4_I LTR Gypsy -66 6464 6292 1 769 1842 298 12 19 chrUextra 24195228 24195867 -4808789 + MICROPIA_I LTR Gypsy 2748 3382 -1094 1 769 5507 11 5 0 chrUextra 24195967 24196611 -4808045 + IVK_DM LINE I 1390 2036 -3366 1 769 1298 204 150 34 chrUextra 24196844 24197355 -4807301 + Gypsy12_LTR LTR Gypsy 1164 1711 -569 1 769 5349 23 8 0 chrUextra 24197455 24198099 -4806557 - DOC2_DM LINE Jockey -3247 1546 898 1 769 2736 163 31 42 chrUextra 24198202 24198843 -4805813 - SAR_DM Satellite Satellite -627 845 212 1 769 5420 20 0 2 chrUextra 24198943 24199587 -4805069 + STALKER4_I LTR Gypsy 2392 3034 -3496 1 769 2901 174 8 20 chrUextra 24199687 24200331 -4804325 + SAR_DM Satellite Satellite 465 1100 -372 1 769 3107 175 6 9 chrUextra 24200435 24201074 -4803582 - SAR_DM Satellite Satellite -411 1061 425 1 769 5710 14 0 0 chrUextra 24201175 24201819 -4802837 - Gypsy_I LTR Gypsy -101 6406 5763 1 769 21 89 0 0 chrUextra 24202242 24202298 -4802358 + AT_rich Low_complexity Low_complexity 1 56 0 1 769 2240 0 4 0 chrUextra 24202317 24202563 -4802093 - SSU-rRNA_Dme rRNA rRNA 0 1995 1749 1 769 2588 202 65 22 chrUextra 24202665 24203307 -4801349 + SAR_DM Satellite Satellite 1 669 -216 1 769 1152 22 0 0 chrUextra 24203407 24203546 -4801110 + (TCTTG)n Simple_repeat Simple_repeat 2 140 0 1 769 2511 206 21 22 chrUextra 24204151 24204795 -4799861 + SAR_DM Satellite Satellite 1 643 -216 1 769 3251 245 27 23 chrUextra 24204895 24206120 -4798536 + SAR_DM Satellite Satellite 1 1230 -558 1 769 942 152 73 11 chrUextra 24206034 24206280 -4798376 - ARS406_DM Unknown Unknown 0 360 43 1 769 5497 25 3 0 chrUextra 24206385 24207027 -4797629 + BATUMI_I LTR Pao 4697 5340 -2623 1 769 2662 191 5 22 chrUextra 24207127 24207749 -4796907 + SAR_DM Satellite Satellite 508 1118 -354 1 769 380 198 9 19 chrUextra 24207663 24207771 -4796885 - XDMR_DM Unknown Unknown 0 360 254 1 769 32 0 0 0 chrUextra 24207945 24207977 -4796679 + AT_rich Low_complexity Low_complexity 1 32 0 1 769 3714 2 0 0 chrUextra 24208109 24208515 -4796141 + SSU-rRNA_Dme rRNA rRNA 1 406 -1589 1 769 699 99 66 0 chrUextra 24208615 24208736 -4795920 - ARS406_DM Unknown Unknown -224 129 1 1 769 2692 178 31 8 chrUextra 24208651 24209257 -4795399 + SAR_DM Satellite Satellite 195 814 -658 1 769 3058 170 12 9 chrUextra 24209359 24210000 -4794656 - SAR_DM Satellite Satellite -484 988 346 1 769 2753 182 25 25 chrUextra 24210103 24210746 -4793910 + SAR_DM Satellite Satellite 465 1107 -365 1 769 768 40 0 0 chrUextra 24210849 24210949 -4793707 + (CAAGA)n Simple_repeat Simple_repeat 2 101 0 1 769 1560 11 0 0 chrUextra 24211593 24211767 -4792889 - ROO_I LTR Pao -1095 7161 6988 1 769 4151 0 0 0 chrUextra 24211754 24212233 -4792423 - ROO_I LTR Pao -3060 5196 4718 1 769 5119 48 3 2 chrUextra 24212345 24212976 -4791680 + DIVER2_I LTR Pao 711 1342 -2805 1 769 2434 183 12 19 chrUextra 24213076 24213640 -4791016 + SAR_DM Satellite Satellite 517 1076 -396 1 769 398 118 0 0 chrUextra 24213651 24213719 -4790937 + SAR_DM Satellite Satellite 543 610 -862 1 769 285 370 0 0 chrUextra 24213819 24214022 -4790634 - Invader3_I LTR Gypsy -703 4185 3983 1 769 2928 167 19 22 chrUextra 24215306 24215948 -4788708 - SAR_DM Satellite Satellite -577 895 256 1 769 4965 30 3 6 chrUextra 24216048 24216691 -4787965 - PROTOP_A DNA P -304 801 161 1 769 4248 42 16 70 chrUextra 24216791 24217434 -4787222 + BATUMI_I LTR Pao 711 1318 -6645 1 769 21 95 0 0 chrUextra 24217689 24217752 -4786904 + AT_rich Low_complexity Low_complexity 1 63 0 1 769 3294 0 0 63 chrUextra 24217764 24218177 -4786479 + LSU-rRNA_Dme rRNA rRNA 1 387 -3513 1 769 5674 3 36 0 chrUextra 24218277 24218920 -4785736 + R2_DM LINE R2 591 1256 -2351 1 769 58 15 0 0 chrUextra 24219082 24219147 -4785509 + AT_rich Low_complexity Low_complexity 1 65 0 1 769 22 35 0 0 chrUextra 24219322 24219351 -4785305 + AT_rich Low_complexity Low_complexity 1 29 0 1 769 4549 30 5 65 chrUextra 24220506 24221149 -4783507 + BATUMI_I LTR Pao 2572 3175 -4788 1 769 1862 60 8 0 chrUextra 24221249 24221497 -4783159 - Baggins1 LINE LOA -413 5040 4791 1 769 2226 19 4 4 chrUextra 24221992 24222256 -4782400 - STALKER4_LTR LTR Gypsy -138 264 1 1 769 2856 16 8 3 chrUextra 24222256 24222635 -4782021 - STALKER4_I LTR Gypsy 0 6530 6150 1 769 921 84 5 20 chrUextra 24222735 24223378 -4781278 + RSP Satellite Satellite 1 633 0 1 769 2071 4 8 4 chrUextra 24223478 24223723 -4780933 + LSU-rRNA_Dme rRNA rRNA 1543 1788 -2112 1 769 3183 0 0 6 chrUextra 24223767 24224121 -4780535 + LSU-rRNA_Dme rRNA rRNA 1788 2139 -1761 1 769 2377 108 14 31 chrUextra 24224221 24224864 -4779792 - DMSAT6 Satellite Satellite -3 632 1 1 769 2624 189 10 10 chrUextra 24224964 24225572 -4779084 - SAR_DM Satellite Satellite -673 799 192 1 769 880 92 0 0 chrUextra 24225476 24225607 -4779049 + ARS406_DM Unknown Unknown 1 131 -222 1 769 4922 87 0 0 chrUextra 24225707 24226350 -4778306 + Gypsy12_I LTR Gypsy 3143 3785 -1761 1 769 4184 16 0 2 chrUextra 24226604 24227093 -4777563 + G2_DM LINE Jockey 2196 2683 -419 1 769 2723 177 9 25 chrUextra 24227201 24227834 -4776822 + SAR_DM Satellite Satellite 496 1118 -354 1 769 452 136 10 24 chrUextra 24227937 24228053 -4776603 - FB4_DM DNA Tc1 -4027 62 2 1 769 1404 154 37 0 chrUextra 24228089 24228361 -4776295 - SAR_DM Satellite Satellite -658 814 533 1 769 909 167 31 0 chrUextra 24228373 24228565 -4776091 - SAR_DM Satellite Satellite -690 782 585 1 769 1368 0 0 0 chrUextra 24229170 24229322 -4775334 + (CACAA)n Simple_repeat Simple_repeat 4 155 0 1 769 5400 17 22 0 chrUextra 24229422 24230065 -4774591 - ROO_I LTR Pao -6330 1926 1270 1 769 2960 175 17 8 chrUextra 24230169 24230808 -4773848 - SAR_DM Satellite Satellite -577 895 251 1 769 4769 2 86 0 chrUextra 24230908 24231550 -4773106 - DM176_I LTR Gypsy -1310 5110 4414 1 769 557 0 0 0 chrUextra 24231651 24231716 -4772940 - QUASIMODO_LTR LTR Gypsy -441 217 153 1 769 4396 10 7 0 chrUextra 24231712 24232294 -4772362 - QUASIMODO_I LTR Gypsy -74 5986 5401 1 769 901 55 0 0 chrUextra 24232394 24232504 -4772152 + R1_DM LINE R1 1281 1390 -3966 1 769 4300 30 26 2 chrUextra 24232505 24233037 -4771619 - FW_DM LINE Jockey -4 4688 4144 1 769 1788 191 17 6 chrUextra 24233137 24233240 -4771416 - SAR_DM Satellite Satellite -723 650 514 1 769 1083 89 0 0 chrUextra 24233240 24233398 -4771258 + ARS406_DM Unknown Unknown 1 158 -195 1 769 1788 191 17 6 chrUextra 24233398 24233780 -4770876 - SAR_DM Satellite Satellite -723 513 1 1 769 277 106 0 21 chrUextra 24234146 24234194 -4770462 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 769 372 49 65 16 chrUextra 24234216 24234278 -4770378 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 769 919 183 102 15 chrUextra 24234277 24234482 -4770174 - DMLTR5 LTR Gypsy 0 266 44 1 769 759 0 11 0 chrUextra 24234623 24234712 -4769944 + ROO_I LTR Pao 8167 8256 0 1 769 3931 0 0 0 chrUextra 24234712 24235140 -4769516 + ROO_LTR LTR Pao 1 428 0 1 769 264 130 0 0 chrUextra 24235366 24235412 -4769244 - ARS406_DM Unknown Unknown -307 46 1 1 769 3409 235 44 23 chrUextra 24235372 24236714 -4767942 + SAR_DM Satellite Satellite 1 1370 -593 1 769 1072 50 0 0 chrUextra 24236611 24236751 -4767905 - ARS406_DM Unknown Unknown -164 189 50 1 769 1416 59 204 0 chrUextra 24237928 24238149 -4766507 - Invader2_LTR LTR Gypsy 0 266 1 1 769 710 45 0 0 chrUextra 24238149 24238238 -4766418 - Invader2_I LTR Gypsy 0 4592 4504 1 769 4724 18 39 0 chrUextra 24238340 24238909 -4765747 - PROTOP_A DNA P -511 594 4 1 769 3184 169 9 8 chrUextra 24239084 24239723 -4764933 + SAR_DM Satellite Satellite 369 1008 -464 1 769 1426 43 13 33 chrUextra 24239825 24240032 -4764624 - BATUMI_LTR LTR Pao -62 210 35 1 769 3231 62 25 5 chrUextra 24240032 24240467 -4764189 - BATUMI_I LTR Pao 0 7963 7520 1 769 557 76 0 0 chrUextra 24240570 24240649 -4764007 + HETA LINE telomeric 1479 1557 -4524 1 769 1918 66 7 39 chrUextra 24240648 24240930 -4763726 + HETA LINE telomeric 1894 2166 -3915 1 769 1999 99 25 0 chrUextra 24240928 24241210 -4763446 + HETA LINE telomeric 2429 2717 -3364 1 769 1019 82 8 17 chrUextra 24241320 24241953 -4762703 + RSP Satellite Satellite 1 627 0 1 769 5523 0 0 3 chrUextra 24242053 24242696 -4761960 + ROO_I LTR Pao 778 1418 -6838 1 769 3094 169 8 8 chrUextra 24242796 24243428 -4761228 - SAR_DM Satellite Satellite -515 957 326 1 769 5531 26 0 0 chrUextra 24243539 24244181 -4760475 + R1_DM LINE R1 3916 4557 -799 1 769 333 0 0 0 chrUextra 24244282 24244319 -4760337 + (TTCTC)n Simple_repeat Simple_repeat 4 40 0 1 769 2591 193 22 37 chrUextra 24245026 24245666 -4758990 - SAR_DM Satellite Satellite -1044 630 1 1 769 2618 13 3 0 chrUextra 24245768 24246070 -4758586 + R1_DM LINE R1 4764 5066 -290 1 769 988 35 0 0 chrUextra 24246067 24246181 -4758475 + R1_DM LINE R1 5243 5356 0 1 769 1396 76 20 0 chrUextra 24246214 24246411 -4758245 + R1_DM LINE R1 1 201 -5155 1 769 2289 207 13 26 chrUextra 24246516 24247136 -4757520 + SAR_DM Satellite Satellite 507 1118 -354 1 769 306 260 10 0 chrUextra 24247054 24247154 -4757502 - XDMR_DM Unknown Unknown -1 359 259 1 769 5515 26 2 0 chrUextra 24247254 24247897 -4756759 - R1_DM LINE R1 -1875 3481 2838 1 96 1772 312 8 8 chrUextra 24247997 24248627 -4756029 - GTWIN_I LTR Gypsy -2813 3608 2979 1 770 5685 3 0 0 chrUextra 24248740 24249383 -4755273 - DOC LINE Jockey -3357 1368 726 1 770 1187 50 0 0 chrUextra 24249483 24249623 -4755033 + R1_DM LINE R1 1689 1828 -3528 1 770 4223 40 0 2 chrUextra 24249621 24250126 -4754530 + R1_DM LINE R1 1317 1820 -3536 1 770 3065 171 11 9 chrUextra 24250226 24250869 -4753787 - SAR_DM Satellite Satellite -447 1025 382 1 770 2790 193 25 8 chrUextra 24250970 24251612 -4753044 + SAR_DM Satellite Satellite 207 859 -613 1 770 1304 18 0 6 chrUextra 24251775 24251940 -4752716 - NTS_DM Other Other -39 201 38 1 770 907 9 0 27 chrUextra 24251940 24252052 -4752604 - NTS_DM Other Other -107 133 25 1 770 22 56 0 0 chrUextra 24252078 24252114 -4752542 + AT_rich Low_complexity Low_complexity 1 36 0 1 770 269 125 0 0 chrUextra 24252127 24252167 -4752489 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 770 262 150 0 0 chrUextra 24252210 24252250 -4752406 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 770 262 150 0 0 chrUextra 24252302 24252342 -4752314 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 770 2928 176 25 11 chrUextra 24252455 24253098 -4751558 - SAR_DM Satellite Satellite -399 1073 422 1 770 285 53 0 0 chrUextra 24253941 24253979 -4750677 - ARS406_DM Unknown Unknown -226 127 90 1 770 2690 185 5 9 chrUextra 24253984 24254567 -4750089 + SAR_DM Satellite Satellite 496 1076 -396 1 770 4313 6 0 2 chrUextra 24254684 24255163 -4749493 - SSU-rRNA_Dme rRNA rRNA -1517 478 1 1 770 32 0 0 0 chrUextra 24255295 24255327 -4749329 + AT_rich Low_complexity Low_complexity 1 32 0 1 770 1940 184 18 6 chrUextra 24255427 24256069 -4748587 + SAR_DM Satellite Satellite 1 649 -539 1 770 1066 19 25 25 chrUextra 24256170 24256330 -4748326 + NTS_DM Other Other 81 240 0 1 770 1835 17 17 17 chrUextra 24256330 24256570 -4748086 + NTS_DM Other Other 1 240 0 1 770 1783 21 17 21 chrUextra 24256570 24256811 -4747845 + NTS_DM Other Other 1 240 0 1 770 5413 3 25 2 chrUextra 24256913 24257556 -4747100 - ROO_I LTR Pao -7079 1177 520 1 770 484 119 35 12 chrUextra 24257711 24257796 -4746860 - NTS_DM Other Other -150 90 4 1 770 1355 6 0 18 chrUextra 24257906 24258071 -4746585 - NTS_DM Other Other -78 162 1 1 770 1799 9 18 13 chrUextra 24258071 24258299 -4746357 - NTS_DM Other Other 0 240 12 1 770 28 48 0 0 chrUextra 24258535 24258577 -4746079 + AT_rich Low_complexity Low_complexity 1 42 0 1 770 514 119 36 0 chrUextra 24258850 24258934 -4745722 - NTS_DM Other Other -150 90 4 1 770 2751 178 13 11 chrUextra 24259142 24259760 -4744896 - SAR_DM Satellite Satellite -662 810 192 1 770 650 141 0 8 chrUextra 24259663 24259785 -4744871 + ARS406_DM Unknown Unknown 1 121 -232 1 770 21 89 0 0 chrUextra 24259996 24260052 -4744604 + AT_rich Low_complexity Low_complexity 1 56 0 1 770 4190 0 2 0 chrUextra 24260071 24260528 -4744128 - SSU-rRNA_Dme rRNA rRNA 0 1995 1538 1 770 3090 169 22 9 chrUextra 24260630 24261271 -4743385 + SAR_DM Satellite Satellite 369 1017 -455 1 770 2057 57 67 2 chrUextra 24261371 24261790 -4742866 - PROTOP_B DNA P -399 754 420 1 770 226 0 0 0 chrUextra 24261790 24261817 -4742839 + PROTOP_B DNA P 1 27 -1126 1 770 1680 5 0 0 chrUextra 24261816 24262014 -4742642 - G2_DM LINE Jockey -5 3097 2900 1 770 32 0 0 0 chrUextra 24262385 24262417 -4742239 + AT_rich Low_complexity Low_complexity 1 32 0 1 770 1877 5 0 0 chrUextra 24262549 24262757 -4741899 + SSU-rRNA_Dme rRNA rRNA 1 208 -1787 1 770 2963 176 13 8 chrUextra 24263612 24264242 -4740414 + SAR_DM Satellite Satellite 326 958 -514 1 770 336 0 0 0 chrUextra 24264343 24264386 -4740270 + NTS_DM Other Other 91 133 -107 1 770 851 0 0 0 chrUextra 24264386 24264482 -4740174 + NTS_DM Other Other 38 133 -107 1 770 1472 20 20 20 chrUextra 24264482 24264685 -4739971 + NTS_DM Other Other 38 240 0 1 770 1791 25 17 17 chrUextra 24264685 24264925 -4739731 + NTS_DM Other Other 1 240 0 1 770 546 16 0 0 chrUextra 24264925 24264986 -4739670 + NTS_DM Other Other 1 61 -179 1 770 4696 3 177 3 chrUextra 24265086 24265729 -4738927 + MDG1_I LTR Gypsy 5749 6503 -93 1 770 5499 25 0 0 chrUextra 24266572 24267215 -4737441 - R1_DM LINE R1 -2147 3209 2567 1 770 2572 102 16 25 chrUextra 24267315 24267958 -4736698 + DMSAT6 Satellite Satellite 1 636 -69 1 770 2671 186 66 23 chrUextra 24268058 24268701 -4735955 - SAR_DM Satellite Satellite -673 670 1 1 770 1931 161 13 5 chrUextra 24269544 24269926 -4734730 - SAR_DM Satellite Satellite -708 764 380 1 770 1574 40 238 12 chrUextra 24269935 24270187 -4734469 + DOC2_DM LINE Jockey 7 315 -4478 1 770 5678 6 0 3 chrUextra 24270287 24270930 -4733726 - R1_DM LINE R1 -304 5052 4412 1 770 860 20 0 0 chrUextra 24271033 24271135 -4733521 + NTS_DM Other Other 32 133 -107 1 770 1304 18 0 6 chrUextra 24271135 24271300 -4733356 + NTS_DM Other Other 38 201 -39 1 770 924 18 0 26 chrUextra 24271347 24271464 -4733192 + NTS_DM Other Other 20 133 -107 1 770 1284 24 0 6 chrUextra 24271464 24271629 -4733027 + NTS_DM Other Other 38 201 -39 1 770 2837 163 26 26 chrUextra 24272549 24273159 -4731497 + SAR_DM Satellite Satellite 275 884 -588 1 770 2441 258 3 3 chrUextra 24273263 24273902 -4730754 + ROVER-I_DM LTR Gypsy 2875 3513 -3071 1 770 4993 0 5 73 chrUextra 24274746 24275388 -4729268 + LSU-rRNA_Dme rRNA rRNA 1545 2142 -1758 1 770 219 36 0 0 chrUextra 24275531 24275559 -4729097 + (T)n Simple_repeat Simple_repeat 1 28 0 1 770 235 170 0 19 chrUextra 24276002 24276056 -4728600 + ROO_I LTR Pao 679 731 -7525 1 770 3423 39 20 11 chrUextra 24276974 24277419 -4727237 - BATUMI_I LTR Pao -7514 449 1 1 770 1431 47 5 35 chrUextra 24277419 24277617 -4727039 - BATUMI_LTR LTR Pao 0 272 81 1 770 1539 0 0 0 chrUextra 24277717 24277888 -4726768 + (GAGAA)n Simple_repeat Simple_repeat 2 172 0 1 770 4384 15 4 6 chrUextra 24278460 24279002 -4725654 + PROTOP DNA P 3940 4480 0 1 770 572 98 0 0 chrUextra 24279002 24279084 -4725572 + TART LINE telomeric 6926 7007 -7470 1 770 21 89 0 0 chrUextra 24279555 24279611 -4725045 + AT_rich Low_complexity Low_complexity 1 56 0 1 770 1905 0 0 0 chrUextra 24279630 24279846 -4724810 - SSU-rRNA_Dme rRNA rRNA 0 1995 1780 1 770 2757 158 15 10 chrUextra 24279946 24280548 -4724108 + SAR_DM Satellite Satellite 389 993 -479 1 770 5303 20 0 0 chrUextra 24280689 24281332 -4723324 + DOC2_DM LINE Jockey 2425 3067 -1726 1 770 2482 52 6 0 chrUextra 24281441 24281768 -4722888 + DMRT1A LINE R1 4844 5172 -11 1 770 288 0 0 0 chrUextra 24282175 24282207 -4722449 + (CACAA)n Simple_repeat Simple_repeat 4 35 0 1 770 1520 11 0 6 chrUextra 24282207 24282386 -4722270 + (CACGA)n Simple_repeat Simple_repeat 1 178 0 1 770 3605 5 0 0 chrUextra 24282394 24282818 -4721838 - DMRT1B LINE R1 -193 4990 4567 1 770 2846 187 5 3 chrUextra 24282918 24283555 -4721101 - SAR_DM Satellite Satellite -611 861 224 1 770 5466 0 3 5 chrUextra 24283661 24284304 -4720352 + SSU-rRNA_Dme rRNA rRNA 830 1471 -524 1 770 1655 0 0 0 chrUextra 24284404 24284592 -4720064 + LSU-rRNA_Dme rRNA rRNA 2445 2632 -1268 1 770 3910 2 4 0 chrUextra 24284592 24285047 -4719609 + R1_DM LINE R1 1 457 -4899 1 770 2650 188 11 9 chrUextra 24285147 24285790 -4718866 + SAR_DM Satellite Satellite 274 917 -555 1 770 5166 9 0 0 chrUextra 24285890 24286533 -4718123 - QUASIMODO_I LTR Gypsy -1305 4755 4113 1 770 954 20 26 26 chrUextra 24286633 24286785 -4717871 + NTS_DM Other Other 89 240 0 1 770 1756 17 17 17 chrUextra 24286785 24287025 -4717631 + NTS_DM Other Other 1 240 0 1 770 891 10 0 0 chrUextra 24287025 24287129 -4717527 + NTS_DM Other Other 1 104 -136 1 770 1296 0 0 0 chrUextra 24287129 24287276 -4717380 - TRANSPAC_LTR LTR Gypsy 0 330 184 1 770 321 274 107 89 chrUextra 24287644 24287924 -4716732 + Invader1_LTR LTR Gypsy 84 368 -55 1 770 5563 2 0 0 chrUextra 24288119 24288761 -4715895 - R1_DM LINE R1 -2945 2411 1770 1 770 22 99 0 0 chrUextra 24288861 24288932 -4715724 + AT_rich Low_complexity Low_complexity 1 71 0 1 770 3054 7 0 24 chrUextra 24289603 24290025 -4714631 + STALKER4_I LTR Gypsy 6119 6530 0 1 770 1774 18 9 0 chrUextra 24290025 24290245 -4714411 + STALKER4_LTR LTR Gypsy 1 222 -180 1 770 2480 80 3 8 chrUextra 24290559 24290986 -4713670 + DMRT1C LINE R1 2118 2593 -2850 1 770 2192 97 24 64 chrUextra 24291087 24291719 -4712937 + DMSAT6 Satellite Satellite 1 606 -21 1 770 387 0 0 0 chrUextra 24291829 24291872 -4712784 + (ATAAG)n Simple_repeat Simple_repeat 2 44 0 1 770 1620 2 0 0 chrUextra 24293313 24293784 -4710872 + (CTAGT)n Simple_repeat Simple_repeat 1 471 0 1 770 911 101 0 6 chrUextra 24293784 24293952 -4710704 + (TCTTG)n Simple_repeat Simple_repeat 3 170 0 1 770 1903 181 24 22 chrUextra 24294080 24294537 -4710119 - Stalker2_I LTR Gypsy -6654 748 291 1 770 28 48 0 0 chrUextra 24294544 24294586 -4710070 + AT_rich Low_complexity Low_complexity 1 42 0 1 770 312 251 258 56 chrUextra 24294821 24295019 -4709637 - Gypsy3_I LTR Gypsy -5780 397 160 1 770 567 229 16 66 chrUextra 24295252 24295434 -4709222 - Gypsy3_LTR LTR Gypsy -6 392 220 1 770 4643 6 115 0 chrUextra 24295539 24296181 -4708475 + DOC LINE Jockey 2394 3109 -1616 1 770 32 0 0 0 chrUextra 24296308 24296340 -4708316 + AT_rich Low_complexity Low_complexity 1 32 0 1 770 28 48 0 0 chrUextra 24296668 24296710 -4707946 + AT_rich Low_complexity Low_complexity 1 42 0 1 770 246 150 0 0 chrUextra 24297061 24297101 -4707555 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 770 22 56 0 0 chrUextra 24297106 24297142 -4707514 + AT_rich Low_complexity Low_complexity 1 36 0 1 770 3863 0 2 4 chrUextra 24297214 24297665 -4706991 - LSU-rRNA_Dme rRNA rRNA 0 3900 3451 1 770 5151 37 3 0 chrUextra 24297765 24298407 -4706249 + DMCR1A LINE CR1 3402 4045 -425 1 770 2868 175 9 6 chrUextra 24298507 24299145 -4705511 - SAR_DM Satellite Satellite -587 885 246 1 770 2769 184 6 9 chrUextra 24299992 24300630 -4704026 - SAR_DM Satellite Satellite -645 827 192 1 770 5005 47 0 9 chrUextra 24300733 24301375 -4703281 + R1_DM LINE R1 1243 1878 -3478 1 770 2546 178 38 13 chrUextra 24301480 24302113 -4702543 - SAR_DM Satellite Satellite -425 1047 399 1 770 34 24 0 0 chrUextra 24302415 24302456 -4702200 + AT_rich Low_complexity Low_complexity 1 41 0 1 770 806 94 0 0 chrUextra 24302959 24303086 -4701570 - ARS406_DM Unknown Unknown -226 127 1 1 770 2737 169 8 8 chrUextra 24302993 24303601 -4701055 + SAR_DM Satellite Satellite 195 802 -670 1 770 1516 186 190 51 chrUextra 24303701 24304306 -4700350 + TART LINE telomeric 9801 10489 -3988 1 770 4648 67 0 5 chrUextra 24304443 24305085 -4699571 + IDEFIX_I LTR Gypsy 2429 3067 -2561 1 770 5323 0 0 0 chrUextra 24305185 24305827 -4698829 - TIRANT_I LTR Gypsy -802 6890 6249 1 770 1801 9 0 5 chrUextra 24305927 24306141 -4698515 + STALKER4_LTR LTR Gypsy 190 402 0 1 770 1803 177 7 12 chrUextra 24306163 24306569 -4698087 + SAR_DM Satellite Satellite 630 1033 -439 1 770 5295 13 0 16 chrUextra 24306670 24307311 -4697345 - CIRCE LINE Composite -1892 4464 3834 1 770 5271 22 5 0 chrUextra 24307411 24308053 -4696603 + R1_DM LINE R1 2243 2887 -2469 1 770 5407 3 5 3 chrUextra 24308153 24308795 -4695861 - LSU-rRNA_Dme rRNA rRNA -2152 1748 1106 1 770 2436 207 9 10 chrUextra 24308899 24309537 -4695119 + SAR_DM Satellite Satellite 1 637 -396 1 770 5178 31 0 0 chrUextra 24309637 24310279 -4694377 + R1_DM LINE R1 2715 3356 -2000 1 770 5555 2 2 2 chrUextra 24310379 24311021 -4693635 - SSU-rRNA_Dme rRNA rRNA -57 1938 1297 1 770 5408 2 0 0 chrUextra 24311121 24311763 -4692893 - ROO_I LTR Pao -2910 5346 4705 1 770 457 19 0 0 chrUextra 24311863 24311917 -4692739 - NTS_DM Other Other -186 54 1 1 770 1756 17 17 17 chrUextra 24311917 24312157 -4692499 - NTS_DM Other Other 0 240 1 1 770 1438 15 20 20 chrUextra 24312157 24312360 -4692296 - NTS_DM Other Other 0 240 38 1 770 832 9 9 27 chrUextra 24312360 24312471 -4692185 - NTS_DM Other Other -107 133 25 1 770 3047 163 9 8 chrUextra 24312605 24313247 -4691409 + SAR_DM Satellite Satellite 386 1028 -444 1 770 2837 173 9 8 chrUextra 24313349 24313989 -4690667 + SAR_DM Satellite Satellite 230 870 -602 1 770 1452 151 11 7 chrUextra 24314089 24314641 -4690015 - SAR_DM Satellite Satellite -808 553 1 1 770 460 133 0 11 chrUextra 24314640 24314731 -4689925 + ARS406_DM Unknown Unknown 14 103 -250 1 770 5359 9 0 2 chrUextra 24314831 24315469 -4689187 - ROO_I LTR Pao -2601 5655 5019 1 770 4183 53 3 21 chrUextra 24315635 24316215 -4688441 + CIRCE LINE Composite 1888 2457 -3899 1 770 1875 0 0 5 chrUextra 24316740 24316957 -4687699 - SSU-rRNA_Dme rRNA rRNA 0 1995 1780 1 770 2465 13 3 13 chrUextra 24317057 24317366 -4687290 + BATUMI_I LTR Pao 6696 7001 -962 1 770 2346 33 75 0 chrUextra 24317392 24317699 -4686957 - BATUMI_I LTR Pao -1543 6420 6091 1 770 1426 64 5 10 chrUextra 24317803 24318007 -4686649 - BATUMI_I LTR Pao -7760 203 1 1 770 2032 32 3 31 chrUextra 24318007 24318298 -4686358 - BATUMI_I LTR Pao -679 7284 7002 1 770 518 56 65 32 chrUextra 24318314 24318407 -4686249 - PROTOP DNA P -459 4021 3926 1 770 291 198 121 47 chrUextra 24319049 24319181 -4685475 - G_DM LINE Jockey -1749 293 157 1 770 488 119 36 0 chrUextra 24319357 24319441 -4685215 + NTS_DM Other Other 4 90 -150 1 770 28 48 0 0 chrUextra 24319714 24319756 -4684900 + AT_rich Low_complexity Low_complexity 1 42 0 1 770 1528 21 5 5 chrUextra 24320025 24320220 -4684436 - R1_DM LINE R1 -1436 3920 3726 1 770 3942 4 0 0 chrUextra 24320212 24320667 -4683989 - LSU-rRNA_Dme rRNA rRNA -1258 2642 2188 1 770 2679 178 9 9 chrUextra 24320767 24321397 -4683259 - SAR_DM Satellite Satellite -651 821 192 1 770 22 56 0 0 chrUextra 24321522 24321558 -4683098 + AT_rich Low_complexity Low_complexity 1 36 0 1 770 4539 2 2 0 chrUextra 24321630 24322151 -4682505 - LSU-rRNA_Dme rRNA rRNA 0 3900 3379 1 770 2474 158 30 3 chrUextra 24322290 24322891 -4681765 + STALKER4_I LTR Gypsy 1368 2022 -4508 1 770 681 113 0 0 chrUextra 24322993 24323108 -4681548 - ARS406_DM Unknown Unknown -238 115 1 1 770 2646 179 10 10 chrUextra 24323015 24323635 -4681021 + SAR_DM Satellite Satellite 195 814 -658 1 770 231 134 176 15 chrUextra 24323736 24323804 -4680852 - Gypsy12_LTR LTR Gypsy -802 1534 1456 1 770 1216 182 135 25 chrUextra 24323807 24324208 -4680448 - Gypsy12_LTR LTR Gypsy -661 1675 1231 1 770 1204 307 14 16 chrUextra 24324482 24325054 -4679602 - MICROPIA_I LTR Gypsy -827 3649 3079 1 770 5531 0 0 3 chrUextra 24325219 24325861 -4678795 - ROO_I LTR Pao -587 7669 7030 1 770 27 29 0 0 chrUextra 24326320 24326354 -4678302 + AT_rich Low_complexity Low_complexity 1 34 0 1 770 394 22 0 0 chrUextra 24326557 24326603 -4678053 + Baggins1 LINE LOA 4727 4772 -681 1 770 5427 14 0 0 chrUextra 24326703 24327345 -4677311 - R1_DM LINE R1 -2945 2411 1770 1 770 3031 165 8 6 chrUextra 24327451 24328086 -4676570 - SAR_DM Satellite Satellite -425 1047 412 1 770 5102 26 28 2 chrUextra 24328187 24328829 -4675827 + R1_DM LINE R1 2061 2719 -2637 1 770 345 188 0 0 chrUextra 24330228 24330313 -4674343 + (CTATT)n Simple_repeat Simple_repeat 5 89 0 1 770 2495 177 10 16 chrUextra 24330413 24331022 -4673634 - SAR_DM Satellite Satellite -673 799 195 1 770 772 95 0 8 chrUextra 24330928 24331055 -4673601 + ARS406_DM Unknown Unknown 1 126 -227 1 770 559 28 14 0 chrUextra 24331155 24331227 -4673429 - LSU-rRNA_Dme rRNA rRNA -1188 2712 2640 1 770 4947 2 0 0 chrUextra 24331225 24331793 -4672863 - R1_DM LINE R1 0 5356 4789 1 770 34 24 0 0 chrUextra 24332382 24332423 -4672233 + AT_rich Low_complexity Low_complexity 1 41 0 1 770 3033 158 9 11 chrUextra 24332639 24333280 -4671376 - SAR_DM Satellite Satellite -457 1015 376 1 770 3583 102 1 4 chrUextra 24333394 24334023 -4670633 - BATUMI_I LTR Pao -1063 6851 5982 1 770 4885 47 3 8 chrUextra 24334865 24335507 -4669149 - CIRCE LINE Composite -3677 2679 2041 1 770 4446 23 34 0 chrUextra 24336433 24336991 -4667665 + FW_DM LINE Jockey 3120 3696 -996 1 770 5232 7 0 0 chrUextra 24337091 24337702 -4666954 + R1_DM LINE R1 4746 5356 0 1 770 270 30 0 0 chrUextra 24337700 24337733 -4666923 + LSU-rRNA_Dme rRNA rRNA 2640 2672 -1228 1 770 47 0 0 0 chrUextra 24338138 24338185 -4666471 + AT_rich Low_complexity Low_complexity 1 47 0 1 770 5449 6 0 0 chrUextra 24338575 24339217 -4665439 - DOC2_DM LINE Jockey -1268 3525 2884 1 770 353 180 10 29 chrUextra 24339317 24339420 -4665236 + XDMR_DM Unknown Unknown 260 360 0 1 770 2521 169 14 32 chrUextra 24339334 24339958 -4664698 - SAR_DM Satellite Satellite -353 1119 507 1 770 5227 6 2 19 chrUextra 24340066 24340701 -4663955 + QUASIMODO_I LTR Gypsy 101 724 -5336 1 770 2865 52 143 5 chrUextra 24340801 24341443 -4663213 + R1_DM LINE R1 634 1364 -3992 1 770 2834 42 155 0 chrUextra 24341543 24342000 -4662656 - PROTOP DNA P -3470 1010 483 1 770 945 17 8 0 chrUextra 24341998 24342117 -4662539 - PROTOP DNA P -4163 317 198 1 770 46 0 0 0 chrUextra 24342133 24342179 -4662477 + AT_rich Low_complexity Low_complexity 1 46 0 1 770 474 31 0 0 chrUextra 24342285 24342350 -4662306 - TART LINE telomeric -11636 2841 2777 1 770 2974 107 23 61 chrUextra 24342357 24342927 -4661729 - TART LINE telomeric -11115 3362 2815 1 770 641 116 0 9 chrUextra 24343027 24343140 -4661516 - ARS406_DM Unknown Unknown -241 112 1 1 770 2625 175 21 11 chrUextra 24343046 24343669 -4660987 + SAR_DM Satellite Satellite 195 823 -649 1 770 3145 0 0 61 chrUextra 24343769 24344177 -4660479 - LSU-rRNA_Dme rRNA rRNA -3517 383 1 1 770 21 95 0 0 chrUextra 24344189 24344252 -4660404 + AT_rich Low_complexity Low_complexity 1 63 0 1 770 2558 186 8 8 chrUextra 24344511 24345119 -4659537 - SAR_DM Satellite Satellite -673 799 192 1 770 815 92 0 0 chrUextra 24345023 24345153 -4659503 + ARS406_DM Unknown Unknown 1 130 -223 1 770 805 0 0 0 chrUextra 24345253 24345346 -4659310 + SSU-rRNA_Dme rRNA rRNA 1903 1995 0 1 770 21 89 0 0 chrUextra 24345365 24345421 -4659235 + AT_rich Low_complexity Low_complexity 1 56 0 1 770 4484 29 3 75 chrUextra 24345995 24346636 -4658020 + Gypsy12_LTR LTR Gypsy 271 865 -1471 1 770 5203 26 5 0 chrUextra 24346737 24347379 -4657277 + R1_DM LINE R1 1471 2115 -3241 1 770 2653 193 6 8 chrUextra 24347479 24348121 -4656535 - SAR_DM Satellite Satellite -627 845 205 1 770 2586 183 13 11 chrUextra 24348225 24348845 -4655811 + SAR_DM Satellite Satellite 456 1076 -396 1 770 1429 78 5 31 chrUextra 24348963 24349187 -4655469 - BATUMI_I LTR Pao -7745 218 1 1 770 1288 13 0 19 chrUextra 24349187 24349346 -4655310 - BATUMI_I LTR Pao -679 7284 7129 1 770 2101 15 0 0 chrUextra 24349342 24349605 -4655051 + QUASIMODO_I LTR Gypsy 4969 5231 -829 1 770 2768 180 8 11 chrUextra 24349705 24350347 -4654309 + SAR_DM Satellite Satellite 208 847 -625 1 770 2395 92 14 28 chrUextra 24350451 24351087 -4653569 + DMSAT6 Satellite Satellite 1 627 0 1 770 796 83 0 0 chrUextra 24351189 24351309 -4653347 - ARS406_DM Unknown Unknown -233 120 1 1 770 2583 178 10 11 chrUextra 24351213 24351831 -4652825 + SAR_DM Satellite Satellite 192 808 -664 1 770 872 89 0 0 chrUextra 24351933 24352068 -4652588 - ARS406_DM Unknown Unknown -218 135 1 1 770 2514 185 7 8 chrUextra 24351972 24352572 -4652084 + SAR_DM Satellite Satellite 192 790 -682 1 770 5317 2 2 0 chrUextra 24352673 24353315 -4651341 - ROO_I LTR Pao -2950 5306 4664 1 770 5469 3 2 0 chrUextra 24353415 24354057 -4650599 - TART LINE telomeric -11084 3393 2751 1 770 5353 2 2 2 chrUextra 24354160 24354799 -4649857 + R1_DM LINE R1 717 1355 -4001 1 770 766 0 34 34 chrUextra 24354899 24355018 -4649638 + NTS_DM Other Other 122 240 0 1 770 1861 0 17 13 chrUextra 24355018 24355257 -4649399 + NTS_DM Other Other 1 240 0 1 770 1861 0 17 13 chrUextra 24355257 24355496 -4649160 + NTS_DM Other Other 1 240 0 1 770 354 0 0 22 chrUextra 24355496 24355541 -4649115 + NTS_DM Other Other 1 44 -196 1 770 2881 166 17 8 chrUextra 24355644 24356280 -4648376 - SAR_DM Satellite Satellite -549 923 282 1 770 1091 139 64 5 chrUextra 24356611 24356814 -4647842 + DNAREP1_DM LINE Penelope 22 236 -358 1 770 25 51 0 0 chrUextra 24356834 24356873 -4647783 + AT_rich Low_complexity Low_complexity 1 39 0 1 770 5356 2 26 0 chrUextra 24357125 24357767 -4646889 - STALKER4_I LTR Gypsy -2589 3941 3283 1 770 2955 164 11 9 chrUextra 24357867 24358509 -4646147 - SAR_DM Satellite Satellite -457 1015 373 1 770 2027 165 17 9 chrUextra 24359354 24359993 -4644663 + SAR_DM Satellite Satellite 1 643 -677 1 770 4843 9 11 19 chrUextra 24360093 24360735 -4643921 + STALKER4_I LTR Gypsy 5704 6340 -190 1 770 5057 20 5 0 chrUextra 24360835 24361477 -4643179 + QUASIMODO_I LTR Gypsy 878 1522 -4538 1 770 2290 84 8 43 chrUextra 24361577 24362218 -4642438 + DMSAT6 Satellite Satellite 1 618 -88 1 770 5594 0 0 2 chrUextra 24362319 24362961 -4641695 + LSU-rRNA_Dme rRNA rRNA 2679 3319 -581 1 770 5206 22 2 3 chrUextra 24363805 24364445 -4640211 + R1_DM LINE R1 1599 2237 -3119 1 770 5495 0 2 5 chrUextra 24364545 24365187 -4639469 - SSU-rRNA_Dme rRNA rRNA -514 1481 842 1 770 1056 8 0 0 chrUextra 24365287 24365415 -4639241 + MAX_I LTR Pao 7787 7914 0 1 770 2765 6 0 0 chrUextra 24365415 24365736 -4638920 + MAX_LTR LTR Pao 1 321 0 1 770 378 247 0 0 chrUextra 24365741 24365919 -4638737 + (CTATT)n Simple_repeat Simple_repeat 2 179 0 1 770 4883 22 83 0 chrUextra 24366029 24366666 -4637990 + ROO_I LTR Pao 1016 1705 -6551 1 770 21 89 0 0 chrUextra 24366931 24366987 -4637669 + AT_rich Low_complexity Low_complexity 1 56 0 1 770 3541 2 2 0 chrUextra 24367006 24367413 -4637243 - SSU-rRNA_Dme rRNA rRNA 0 1995 1588 1 770 4773 58 2 6 chrUextra 24367513 24368155 -4636501 + BATUMI_I LTR Pao 3341 3979 -3984 1 770 5523 2 0 0 chrUextra 24368255 24368897 -4635759 + DOC LINE Jockey 2420 3061 -1664 1 770 23 68 0 0 chrUextra 24369864 24369908 -4634748 + AT_rich Low_complexity Low_complexity 1 44 0 1 770 26 30 0 0 chrUextra 24369954 24369987 -4634669 + AT_rich Low_complexity Low_complexity 1 33 0 1 770 28 48 0 0 chrUextra 24370506 24370548 -4634108 + AT_rich Low_complexity Low_complexity 1 42 0 1 770 488 119 36 0 chrUextra 24370821 24370905 -4633751 - NTS_DM Other Other -150 90 4 1 770 687 10 0 38 chrUextra 24371015 24371121 -4633535 - NTS_DM Other Other -78 162 61 1 770 323 291 39 8 chrUextra 24371245 24371373 -4633283 - Copia2_I LTR Copia -3464 698 567 1 770 3043 44 3 0 chrUextra 24372014 24372398 -4632258 - DIVER2_LTR LTR Pao 0 385 1 1 770 1584 29 5 5 chrUextra 24372398 24372603 -4632053 - DIVER2_I LTR Pao 0 4147 3943 1 770 28 48 0 0 chrUextra 24372735 24372777 -4631879 + AT_rich Low_complexity Low_complexity 1 42 0 1 770 488 119 36 0 chrUextra 24373050 24373134 -4631522 - NTS_DM Other Other -150 90 4 1 770 680 10 0 30 chrUextra 24373244 24373344 -4631312 - NTS_DM Other Other -78 162 66 1 770 2984 166 9 9 chrUextra 24374185 24374824 -4629832 + SAR_DM Satellite Satellite 404 1042 -430 1 770 5261 17 0 3 chrUextra 24374926 24375566 -4629090 - DMRT1A LINE R1 -4215 968 331 1 770 3796 37 2 2 chrUextra 24375667 24376151 -4628505 + R1_DM LINE R1 907 1390 -3966 1 770 1031 32 6 0 chrUextra 24376152 24376308 -4628348 - FW_DM LINE Jockey -1 4691 4535 1 770 476 18 0 0 chrUextra 24376408 24376464 -4628192 - NTS_DM Other Other -184 56 1 1 770 1723 25 17 17 chrUextra 24376464 24376704 -4627952 - NTS_DM Other Other 0 240 1 1 770 1704 21 17 21 chrUextra 24376704 24376945 -4627711 - NTS_DM Other Other 0 240 1 1 770 552 31 39 58 chrUextra 24376945 24377049 -4627607 - NTS_DM Other Other 0 240 139 1 770 5398 11 0 0 chrUextra 24377149 24377790 -4626866 + DMRT1B LINE R1 2040 2680 -2503 1 770 2431 151 41 0 chrUextra 24377892 24378328 -4626328 + FW_DM LINE Jockey 2369 2822 -1870 1 770 831 129 0 0 chrUextra 24378320 24378460 -4626196 + FW_DM LINE Jockey 3166 3305 -1387 1 770 552 42 0 0 chrUextra 24378460 24378531 -4626125 + (AATAG)n Simple_repeat Simple_repeat 4 74 0 1 770 3377 72 49 24 chrUextra 24378631 24379272 -4625384 + PROTOP_A DNA P 532 1134 -19 1 96 5280 25 2 0 chrUextra 24379372 24380013 -4624643 - R1_DM LINE R1 -419 4937 4296 1 771 1524 59 0 2 chrUextra 24380113 24380608 -4624048 + (TTCTC)n Simple_repeat Simple_repeat 1 494 0 1 771 915 56 0 0 chrUextra 24380617 24380743 -4623913 + (GAGAA)n Simple_repeat Simple_repeat 1 126 0 1 771 5451 0 0 2 chrUextra 24380854 24381495 -4623161 + LSU-rRNA_Dme rRNA rRNA 477 1116 -2784 1 771 2594 185 32 6 chrUextra 24381595 24382226 -4622430 - SAR_DM Satellite Satellite -450 1022 376 1 771 2767 177 8 11 chrUextra 24382336 24382971 -4621685 - SAR_DM Satellite Satellite -645 827 195 1 771 5610 0 0 2 chrUextra 24383077 24383718 -4620938 - SSU-rRNA_Dme rRNA rRNA -1114 881 242 1 771 2905 164 9 11 chrUextra 24383818 24384459 -4620197 + SAR_DM Satellite Satellite 333 972 -500 1 771 1763 39 172 0 chrUextra 24384884 24385139 -4619517 + PROTOP DNA P 1 298 -4182 1 771 403 44 44 0 chrUextra 24385126 24385194 -4619462 + PROTOP DNA P 522 592 -3888 1 771 5244 27 0 3 chrUextra 24385302 24385941 -4618715 - MAX_I LTR Pao -3713 4201 3565 1 771 5445 2 3 3 chrUextra 24386041 24386682 -4617974 - LSU-rRNA_Dme rRNA rRNA -2477 1423 783 1 771 4975 5 2 39 chrUextra 24386782 24387423 -4617233 + LSU-rRNA_Dme rRNA rRNA 32 648 -3252 1 771 2532 98 23 9 chrUextra 24387523 24388164 -4616492 + DMSAT6 Satellite Satellite 1 649 -267 1 771 5452 16 0 0 chrUextra 24388264 24388905 -4615751 - LSU-rRNA_Dme rRNA rRNA -1460 2440 1800 1 771 1620 0 0 0 chrUextra 24389005 24389221 -4615435 + (CACAA)n Simple_repeat Simple_repeat 1 216 0 1 771 1859 43 8 45 chrUextra 24389331 24389597 -4615059 - BLOOD_LTR LTR Gypsy -143 256 1 1 771 346 21 0 20 chrUextra 24389597 24389646 -4615010 - BLOOD_I LTR Gypsy 0 6613 6566 1 771 5459 2 3 3 chrUextra 24389746 24390387 -4614269 + LSU-rRNA_Dme rRNA rRNA 752 1392 -2508 1 771 5222 33 0 0 chrUextra 24390487 24391128 -4613528 + R1_DM LINE R1 4184 4824 -532 1 771 5373 2 2 5 chrUextra 24391228 24391869 -4612787 + R1_DM LINE R1 3260 3898 -1458 1 771 1740 0 14 14 chrUextra 24391969 24392190 -4612466 - NTS_DM Other Other -19 221 1 1 771 1861 0 17 13 chrUextra 24392190 24392429 -4612227 - NTS_DM Other Other 0 240 1 1 771 1280 6 22 17 chrUextra 24392429 24392610 -4612046 - NTS_DM Other Other 0 240 59 1 771 2720 168 18 11 chrUextra 24392710 24393338 -4611318 - SAR_DM Satellite Satellite -515 957 326 1 771 2623 191 9 11 chrUextra 24393451 24394090 -4610566 + SAR_DM Satellite Satellite 419 1056 -416 1 771 3040 95 77 42 chrUextra 24394196 24394833 -4609823 + STALKER4_I LTR Gypsy 681 1339 -5191 1 771 2496 74 11 24 chrUextra 24394933 24395574 -4609082 - DMSAT6 Satellite Satellite -67 632 1 1 771 4944 38 3 2 chrUextra 24395674 24396315 -4608341 + R1_DM LINE R1 698 1339 -4017 1 771 1521 178 39 12 chrUextra 24396415 24396745 -4607911 - STALKER4_I LTR Gypsy -5957 573 235 1 771 27 0 0 0 chrUextra 24396773 24396800 -4607856 + AT_rich Low_complexity Low_complexity 1 27 0 1 771 849 117 3 40 chrUextra 24396886 24397056 -4607600 - STALKER4_LTR LTR Gypsy -3 399 249 1 771 31 26 0 0 chrUextra 24397699 24397737 -4606919 + AT_rich Low_complexity Low_complexity 1 38 0 1 771 1153 26 117 0 chrUextra 24398383 24398537 -4606119 + PROTOP_B DNA P 1 172 -981 1 771 488 119 36 0 chrUextra 24399524 24399608 -4605048 + NTS_DM Other Other 4 90 -150 1 771 28 48 0 0 chrUextra 24399881 24399923 -4604733 + AT_rich Low_complexity Low_complexity 1 42 0 1 771 1953 20 0 4 chrUextra 24400120 24400369 -4604287 - PROTOP DNA P -431 4049 3802 1 771 2730 43 43 0 chrUextra 24400364 24400761 -4603895 - PROTOP DNA P -3657 823 410 1 771 5343 11 16 0 chrUextra 24400861 24401501 -4603155 - R1_DM LINE R1 -4630 726 77 1 771 1242 19 0 0 chrUextra 24401602 24401761 -4602895 - PROTOP DNA P -520 3960 3802 1 771 2977 50 38 0 chrUextra 24401756 24402199 -4602457 - PROTOP DNA P -3657 823 364 1 771 389 0 0 0 chrUextra 24402191 24402239 -4602417 - PROTOP DNA P -4197 283 236 1 771 5028 10 0 0 chrUextra 24402343 24402946 -4601710 + IDEFIX_I LTR Gypsy 2083 2685 -2943 1 771 273 51 0 0 chrUextra 24402945 24402984 -4601672 + IDEFIX_I LTR Gypsy 2818 2856 -2772 1 771 2916 167 17 11 chrUextra 24403830 24404466 -4600190 - SAR_DM Satellite Satellite -577 895 256 1 771 5099 2 2 0 chrUextra 24404566 24405153 -4599503 + LSU-rRNA_Dme rRNA rRNA 2045 2632 -1268 1 771 455 0 0 0 chrUextra 24405153 24405207 -4599449 + R1_DM LINE R1 1 54 -5302 1 771 5272 23 2 0 chrUextra 24405307 24405948 -4598708 + R1_DM LINE R1 2114 2755 -2601 1 771 197 182 18 0 chrUextra 24406052 24406107 -4598549 + (CATAA)n Simple_repeat Simple_repeat 2 57 0 1 771 5213 2 0 5 chrUextra 24406789 24407395 -4597261 - LSU-rRNA_Dme rRNA rRNA -1510 2390 1788 1 771 1524 11 0 0 chrUextra 24407530 24407718 -4596938 + NTS_DM Other Other 11 198 -42 1 771 3705 14 0 0 chrUextra 24407727 24408171 -4596485 - G2_DM LINE Jockey 0 3102 2659 1 771 4783 35 2 16 chrUextra 24408276 24408912 -4595744 - BATUMI_I LTR Pao -4666 3297 2671 1 771 2868 174 9 8 chrUextra 24409017 24409653 -4595003 + SAR_DM Satellite Satellite 282 918 -554 1 771 558 144 0 0 chrUextra 24410496 24410600 -4594056 - ARS406_DM Unknown Unknown -249 104 1 1 771 2717 174 18 8 chrUextra 24410507 24411134 -4593522 + SAR_DM Satellite Satellite 195 827 -645 1 771 1976 187 59 27 chrUextra 24411235 24411873 -4592783 - SAR_DM Satellite Satellite -515 657 1 1 771 1136 72 6 0 chrUextra 24412723 24412889 -4591767 - PROTOP_B DNA P -793 360 194 1 771 537 151 92 8 chrUextra 24412886 24413006 -4591650 - PROTOP DNA P -4350 130 1 1 771 1045 135 69 171 chrUextra 24413006 24413306 -4591350 - HOBO DNA hAT -2704 312 44 1 771 2584 181 11 13 chrUextra 24413459 24414093 -4590563 - SAR_DM Satellite Satellite -645 827 195 1 771 2499 179 15 15 chrUextra 24414222 24414840 -4589816 - SAR_DM Satellite Satellite -396 1076 459 1 771 5420 2 2 2 chrUextra 24414940 24415581 -4589075 + R1_DM LINE R1 839 1479 -3877 1 771 417 66 0 0 chrUextra 24415684 24415745 -4588911 + (TTCTC)n Simple_repeat Simple_repeat 2 62 0 1 771 998 149 20 10 chrUextra 24416423 24416626 -4588030 + HOBO DNA hAT 2812 3016 0 1 771 734 181 19 19 chrUextra 24416633 24416791 -4587865 - HETRP_DM Satellite Satellite -197 1675 1518 1 771 483 205 79 0 chrUextra 24416936 24417063 -4587593 - HETRP_DM Satellite Satellite -203 1669 1533 1 771 5553 0 2 2 chrUextra 24417163 24417804 -4586852 + LSU-rRNA_Dme rRNA rRNA 2431 3071 -829 1 771 5119 30 3 2 chrUextra 24417904 24418545 -4586111 - R1_DM LINE R1 -513 4843 4202 1 771 2431 179 16 29 chrUextra 24418646 24419278 -4585378 + SAR_DM Satellite Satellite 496 1119 -353 1 771 235 222 0 0 chrUextra 24419223 24419286 -4585370 - XDMR Unknown Unknown 0 361 299 1 771 1252 18 0 6 chrUextra 24419472 24419637 -4585019 - NTS_DM Other Other -39 201 38 1 771 870 9 0 27 chrUextra 24419637 24419749 -4584907 - NTS_DM Other Other -107 133 25 1 771 22 56 0 0 chrUextra 24419775 24419811 -4584845 + AT_rich Low_complexity Low_complexity 1 36 0 1 771 255 125 0 0 chrUextra 24419824 24419864 -4584792 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 771 246 150 0 0 chrUextra 24419907 24419947 -4584709 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 771 2748 175 8 11 chrUextra 24420144 24420768 -4583888 + SAR_DM Satellite Satellite 406 1027 -445 1 771 2245 65 0 75 chrUextra 24420874 24421221 -4583435 + CIRCE LINE Composite 972 1292 -5064 1 771 543 335 22 22 chrUextra 24421133 24421444 -4583212 + Gypsy12_I LTR Gypsy 3059 3369 -2177 1 771 1452 25 0 95 chrUextra 24421287 24421509 -4583147 + CIRCE LINE Composite 1305 1505 -4851 1 771 3031 165 9 9 chrUextra 24422350 24422991 -4581665 - SAR_DM Satellite Satellite -450 1022 382 1 771 2928 0 3 0 chrUextra 24423091 24423429 -4581227 + LSU-rRNA_Dme rRNA rRNA 3562 3900 0 1 771 22 56 0 0 chrUextra 24423501 24423537 -4581119 + AT_rich Low_complexity Low_complexity 1 36 0 1 771 246 150 0 0 chrUextra 24423542 24423582 -4581074 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 771 246 150 0 0 chrUextra 24423634 24423674 -4580982 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 771 1770 38 77 0 chrUextra 24423832 24424067 -4580589 - R1_DM LINE R1 -2827 2529 2277 1 771 436 0 0 0 chrUextra 24424067 24424117 -4580539 + CIRCE LINE Composite 4931 4980 -1376 1 771 368 170 40 10 chrUextra 24424585 24424686 -4579970 + SAR_DM Satellite Satellite 326 429 -1043 1 771 1070 173 31 10 chrUextra 24424697 24425201 -4579455 + SAR_DM Satellite Satellite 1 514 -680 1 771 2914 161 14 9 chrUextra 24425314 24425952 -4578704 + SAR_DM Satellite Satellite 332 972 -500 1 771 2946 171 9 6 chrUextra 24426055 24426695 -4577961 - SAR_DM Satellite Satellite -549 923 282 1 771 2480 193 6 20 chrUextra 24426799 24427435 -4577221 + SAR_DM Satellite Satellite 481 1107 -365 1 771 5390 3 8 5 chrUextra 24427537 24428178 -4576478 + MAX_I LTR Pao 1263 1905 -6009 1 771 362 0 0 0 chrUextra 24428278 24428319 -4576337 - NTS_DM Other Other -162 78 38 1 771 840 9 0 35 chrUextra 24428319 24428432 -4576224 - NTS_DM Other Other -107 133 25 1 771 22 56 0 0 chrUextra 24428458 24428494 -4576162 + AT_rich Low_complexity Low_complexity 1 36 0 1 771 255 125 0 0 chrUextra 24428507 24428547 -4576109 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 771 246 150 0 0 chrUextra 24428590 24428630 -4576026 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 771 246 150 0 0 chrUextra 24428682 24428722 -4575934 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 771 246 150 0 0 chrUextra 24428774 24428814 -4575842 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 771 22 56 0 0 chrUextra 24428819 24428855 -4575801 + AT_rich Low_complexity Low_complexity 1 36 0 1 771 34 24 0 0 chrUextra 24429259 24429300 -4575356 + AT_rich Low_complexity Low_complexity 1 41 0 1 771 240 68 136 0 chrUextra 24429760 24429804 -4574852 + ARS406_DM Unknown Unknown 140 189 -164 1 771 2571 187 42 24 chrUextra 24429766 24430396 -4574260 - SAR_DM Satellite Satellite -615 641 1 1 771 575 158 350 46 chrUextra 24430605 24430845 -4573811 - ROVER-LTR_DM LTR Gypsy 0 367 55 1 771 2201 50 0 0 chrUextra 24430841 24431142 -4573514 - I_DM LINE I -5045 1186 886 1 771 241 30 30 0 chrUextra 24431269 24431302 -4573354 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2599 1 771 5127 2 0 0 chrUextra 24431297 24431883 -4572773 - LSU-rRNA_Dme rRNA rRNA -1247 2653 2068 1 771 3032 25 77 2 chrUextra 24431983 24432624 -4572032 - R1_DM LINE R1 -1295 4061 3373 1 771 2135 8 0 0 chrUextra 24432724 24432970 -4571686 - DMLTR5 LTR Gypsy -20 246 1 1 771 3404 0 2 0 chrUextra 24432970 24433365 -4571291 + SSU-rRNA_Dme rRNA rRNA 700 1095 -900 1 771 1273 16 21 21 chrUextra 24433465 24433652 -4571004 + NTS_DM Other Other 54 240 0 1 771 1744 21 17 17 chrUextra 24433652 24433892 -4570764 + NTS_DM Other Other 1 240 0 1 771 1627 19 14 5 chrUextra 24433892 24434105 -4570551 + NTS_DM Other Other 1 215 -25 1 771 450 0 0 0 chrUextra 24434206 24434256 -4570400 + (CAAGA)n Simple_repeat Simple_repeat 3 52 0 1 771 751 32 0 0 chrUextra 24434947 24435040 -4569616 + Invader2_I LTR Gypsy 548 640 -3952 1 771 603 24 0 24 chrUextra 24435037 24435122 -4569534 + Invader2_I LTR Gypsy 1173 1255 -3337 1 771 794 112 56 6 chrUextra 24435124 24435304 -4569352 + HMSBEAGLE_I LTR Gypsy 522 710 -5819 1 771 1140 84 5 38 chrUextra 24435402 24435588 -4569068 + HMSBEAGLE_I LTR Gypsy 1123 1302 -5227 1 771 1778 13 21 13 chrUextra 24435696 24435934 -4568722 + NTS_DM Other Other 1 240 0 1 771 1850 4 17 13 chrUextra 24435934 24436173 -4568483 + NTS_DM Other Other 1 240 0 1 771 1276 13 0 0 chrUextra 24436173 24436329 -4568327 + NTS_DM Other Other 1 156 -84 1 771 5503 3 0 0 chrUextra 24436429 24437070 -4567586 + Invader3_I LTR Gypsy 1925 2565 -2323 1 771 485 73 0 0 chrUextra 24437178 24437246 -4567410 - R1_DM LINE R1 -5288 68 1 1 771 4448 19 2 0 chrUextra 24437279 24437811 -4566845 - R1_DM LINE R1 0 5356 4824 1 771 5400 6 6 2 chrUextra 24437911 24438552 -4566104 + PROTOP DNA P 2396 3039 -1441 1 771 34 24 0 0 chrUextra 24438769 24438810 -4565846 + AT_rich Low_complexity Low_complexity 1 41 0 1 771 4511 57 14 5 chrUextra 24439400 24440034 -4564622 + TART LINE telomeric 295 934 -13543 1 771 5502 0 2 0 chrUextra 24440134 24440775 -4563881 + R1_DM LINE R1 1566 2207 -3149 1 771 1156 7 0 0 chrUextra 24440935 24441070 -4563586 + 5S_DM RNA RNA 1 135 0 1 771 1157 7 0 0 chrUextra 24441311 24441446 -4563210 + 5S_DM RNA RNA 1 135 0 1 771 467 14 29 0 chrUextra 24441616 24441686 -4562970 + NTS_DM Other Other 62 133 -107 1 771 817 0 0 0 chrUextra 24441686 24441782 -4562874 + NTS_DM Other Other 38 133 -107 1 771 1408 20 20 20 chrUextra 24441782 24441985 -4562671 + NTS_DM Other Other 38 240 0 1 771 1713 25 17 17 chrUextra 24441985 24442225 -4562431 + NTS_DM Other Other 1 240 0 1 771 262 31 0 0 chrUextra 24442225 24442257 -4562399 + NTS_DM Other Other 1 32 -208 1 771 246 150 0 0 chrUextra 24442434 24442474 -4562182 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 771 246 150 0 0 chrUextra 24442526 24442566 -4562090 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 771 255 125 0 0 chrUextra 24442609 24442649 -4562007 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 771 870 9 0 27 chrUextra 24442724 24442836 -4561820 + NTS_DM Other Other 25 133 -107 1 771 1202 19 6 6 chrUextra 24442836 24442998 -4561658 + NTS_DM Other Other 38 199 -41 1 771 239 54 0 51 chrUextra 24443098 24443128 -4561528 - DMTOM1_LTR LTR Gypsy -34 376 349 1 771 552 148 40 16 chrUextra 24443128 24443252 -4561404 - DMTOM1_LTR LTR Gypsy 0 410 284 1 771 235 190 17 17 chrUextra 24443269 24443328 -4561328 - DM176_LTR LTR Gypsy -141 366 308 1 771 781 126 0 83 chrUextra 24443562 24443718 -4560938 - DM176_I LTR Gypsy 0 6420 6278 1 771 1209 96 0 0 chrUextra 24444588 24444766 -4559890 + (TTCTC)n Simple_repeat Simple_repeat 1 178 0 1 771 1802 182 57 25 chrUextra 24445321 24445962 -4558694 + SAR_DM Satellite Satellite 1 660 -208 1 771 5496 0 0 2 chrUextra 24446803 24447444 -4557212 - R1_DM LINE R1 -3366 1990 1351 1 771 4820 4 4 0 chrUextra 24447544 24448106 -4556550 - DM1731_I LTR Copia -3412 564 1 1 771 660 0 0 0 chrUextra 24448109 24448185 -4556471 - DM1731_LTR LTR Copia -252 84 9 1 771 2032 163 8 9 chrUextra 24448288 24448926 -4555730 + SAR_DM Satellite Satellite 1 636 -921 1 771 320 105 18 0 chrUextra 24449026 24449083 -4555573 - ARS406_DM Unknown Unknown -295 58 1 1 771 2967 174 5 3 chrUextra 24449043 24449667 -4554989 + SAR_DM Satellite Satellite 246 870 -602 1 771 3627 37 153 3 chrUextra 24449767 24450408 -4554248 + R1_DM LINE R1 1000 1736 -3620 1 771 28 48 0 0 chrUextra 24450529 24450571 -4554085 + AT_rich Low_complexity Low_complexity 1 42 0 1 771 488 119 36 0 chrUextra 24450845 24450929 -4553727 - NTS_DM Other Other -150 90 4 1 771 771 9 0 27 chrUextra 24451039 24451149 -4553507 - NTS_DM Other Other -78 162 56 1 771 495 46 0 0 chrUextra 24451251 24451316 -4553340 - R1_DM LINE R1 -5291 65 1 1 771 4255 31 2 0 chrUextra 24451349 24451872 -4552784 - R1_DM LINE R1 0 5356 4833 1 771 1532 202 49 75 chrUextra 24452731 24453372 -4551284 + TAHRE LINE telomeric 6944 7501 -2962 1 771 3795 8 150 0 chrUextra 24454212 24454844 -4549812 - Gypsy4_I LTR Gypsy -486 5802 5076 1 771 2528 89 20 3 chrUextra 24454952 24455592 -4549064 + DMSAT6 Satellite Satellite 1 651 -108 1 771 1605 66 0 0 chrUextra 24455692 24455935 -4548721 + S_DM DNA Tc1 1494 1736 0 1 771 507 81 50 0 chrUextra 24455935 24456034 -4548622 - PROTOP_B DNA P -399 754 651 1 771 414 84 0 35 chrUextra 24456040 24456126 -4548530 + PROTOP_B DNA P 647 729 -424 1 771 716 49 266 0 chrUextra 24456138 24456329 -4548327 - PROTOP_B DNA P -518 635 394 1 771 1910 90 9 9 chrUextra 24456432 24456769 -4547887 + S_DM DNA Tc1 84 420 -1316 1 771 1466 74 0 0 chrUextra 24456768 24456998 -4547658 + S_DM DNA Tc1 1507 1736 0 1 771 549 73 12 0 chrUextra 24456998 24457072 -4547584 + CIRCE LINE Composite 4493 4567 -1789 1 771 4496 83 31 0 chrUextra 24457172 24457808 -4546848 - Gypsy12_I LTR Gypsy -269 5277 4622 1 771 5393 9 0 0 chrUextra 24457912 24458552 -4546104 + Gypsy4_I LTR Gypsy 4875 5514 -774 1 771 5139 17 34 3 chrUextra 24458652 24459292 -4545364 - R1_DM LINE R1 -1787 3569 2910 1 771 2329 98 19 38 chrUextra 24459392 24460032 -4544624 + DMSAT6 Satellite Satellite 1 628 -97 1 771 2689 178 11 9 chrUextra 24460132 24460761 -4543895 + SAR_DM Satellite Satellite 447 1076 -396 1 771 2655 165 19 18 chrUextra 24461612 24462241 -4542415 - SAR_DM Satellite Satellite -663 809 180 1 771 5434 3 0 5 chrUextra 24462354 24462992 -4541664 + G2_DM LINE Jockey 1105 1739 -1363 1 771 5376 0 3 0 chrUextra 24463092 24463732 -4540924 - ROO_I LTR Pao -4122 4134 3493 1 771 5575 3 0 0 chrUextra 24463832 24464472 -4540184 + MICROPIA_I LTR Gypsy 2332 2971 -1505 1 771 5110 23 0 2 chrUextra 24464572 24465212 -4539444 + STALKER4_I LTR Gypsy 2393 3031 -3499 1 771 280 143 18 0 chrUextra 24465312 24465368 -4539288 - ARS406_DM Unknown Unknown -296 57 1 1 771 2836 178 6 6 chrUextra 24465319 24465952 -4538704 + SAR_DM Satellite Satellite 237 869 -603 1 771 21 95 0 0 chrUextra 24466129 24466192 -4538464 + AT_rich Low_complexity Low_complexity 1 63 0 1 771 3781 2 2 51 chrUextra 24466204 24466692 -4537964 + LSU-rRNA_Dme rRNA rRNA 1 464 -3436 1 771 2437 0 0 0 chrUextra 24466792 24467073 -4537583 - STALKER4_LTR LTR Gypsy -121 281 1 1 771 2781 3 0 0 chrUextra 24467073 24467432 -4537224 - STALKER4_I LTR Gypsy 0 6530 6172 1 771 3620 76 75 12 chrUextra 24467532 24468172 -4536484 - Gypsy12_I LTR Gypsy -258 5288 4609 1 771 2425 28 0 0 chrUextra 24468272 24468560 -4536096 - Baggins1 LINE LOA -149 5304 5017 1 771 2944 26 0 0 chrUextra 24468564 24468912 -4535744 - Baggins1 LINE LOA -97 5356 5009 1 771 5423 5 0 5 chrUextra 24469012 24469652 -4535004 - G2_DM LINE Jockey -1423 1679 1043 1 771 2175 112 5 45 chrUextra 24469752 24470348 -4534308 + DMSAT6 Satellite Satellite 1 571 -69 1 771 4657 5 5 73 chrUextra 24471232 24471872 -4532784 - LSU-rRNA_Dme rRNA rRNA -2040 1860 1265 1 771 21 89 0 0 chrUextra 24472419 24472475 -4532181 + AT_rich Low_complexity Low_complexity 1 56 0 1 771 5452 2 3 0 chrUextra 24472712 24473352 -4531304 + ROO_I LTR Pao 4958 5599 -2657 1 771 5175 25 2 0 chrUextra 24473452 24474092 -4530564 + ROO_I LTR Pao 1930 2570 -5686 1 771 5468 3 0 2 chrUextra 24474192 24474832 -4529824 - R1_DM LINE R1 -879 4477 3839 1 771 4679 59 3 3 chrUextra 24475682 24476312 -4528344 + R1_DM LINE R1 1 630 -4726 1 771 5242 28 0 0 chrUextra 24476412 24477052 -4527604 - R1_DM LINE R1 -547 4809 4170 1 771 2543 182 8 21 chrUextra 24477152 24477774 -4526882 + SAR_DM Satellite Satellite 498 1111 -361 1 771 289 191 11 22 chrUextra 24477697 24477788 -4526868 - XDMR_DM Unknown Unknown 0 360 271 1 771 2810 169 17 12 chrUextra 24477892 24478532 -4526124 + SAR_DM Satellite Satellite 228 870 -602 1 771 2152 15 30 0 chrUextra 24478632 24478901 -4525755 - PROTOP_A DNA P -699 406 130 1 771 26 30 0 0 chrUextra 24479059 24479092 -4525564 + AT_rich Low_complexity Low_complexity 1 33 0 1 771 3735 22 0 0 chrUextra 24479372 24479826 -4524830 - PROTOP_A DNA P -651 454 1 1 771 699 109 75 71 chrUextra 24479826 24479977 -4524679 + TART LINE telomeric 3884 4029 -10448 1 771 4097 90 82 0 chrUextra 24480139 24480752 -4523904 + Gypsy_I LTR Gypsy 511 1173 -5334 1 771 5519 5 2 2 chrUextra 24480852 24481492 -4523164 - LSU-rRNA_Dme rRNA rRNA -268 3632 2993 1 771 3509 27 0 7 chrUextra 24481787 24482232 -4522424 + PROTOP_A DNA P 1 442 -663 1 771 1843 194 19 5 chrUextra 24483079 24483712 -4520944 - SAR_DM Satellite Satellite -651 641 1 1 771 1167 7 0 0 chrUextra 24483934 24484069 -4520587 + 5S_DM RNA RNA 1 135 0 1 771 1167 7 0 0 chrUextra 24484300 24484435 -4520221 + 5S_DM RNA RNA 1 135 0 1 771 2718 169 32 8 chrUextra 24484553 24485186 -4519470 - SAR_DM Satellite Satellite -645 827 180 1 771 3156 0 5 3 chrUextra 24485292 24485666 -4518990 + LSU-rRNA_Dme rRNA rRNA 1414 1788 -2112 1 771 1914 0 0 5 chrUextra 24485710 24485932 -4518724 + LSU-rRNA_Dme rRNA rRNA 1788 2008 -1892 1 771 3074 122 21 43 chrUextra 24486037 24486612 -4518044 + Gypsy12_LTR LTR Gypsy 1775 2336 0 1 771 409 34 0 33 chrUextra 24486612 24486672 -4517984 + Gypsy12_I LTR Gypsy 1 58 -5488 1 771 5149 27 2 0 chrUextra 24486772 24487411 -4517245 + R1_DM LINE R1 2490 3129 -2227 1 771 590 95 0 0 chrUextra 24487512 24487596 -4517060 - TAHRE LINE telomeric -8117 2346 2263 1 771 1813 66 7 39 chrUextra 24487594 24487876 -4516780 - HETA LINE telomeric -3915 2166 1894 1 771 1870 79 25 0 chrUextra 24487875 24488152 -4516504 - HETA LINE telomeric -4524 1557 1274 1 771 5192 20 6 2 chrUextra 24488254 24488892 -4515764 + R1_DM LINE R1 1498 2138 -3218 1 771 1138 165 4 8 chrUextra 24488994 24489232 -4515424 + SAR_DM Satellite Satellite 667 903 -569 1 771 1740 181 5 3 chrUextra 24489247 24489630 -4515026 + SAR_DM Satellite Satellite 496 879 -593 1 771 1161 0 0 0 chrUextra 24489732 24489870 -4514786 + QUASIMODO_LTR LTR Gypsy 521 658 0 1 771 3831 11 34 2 chrUextra 24489870 24490205 -4514451 + QUASIMODO_I LTR Gypsy 1 334 -5726 1 771 195 0 86 0 chrUextra 24490205 24490240 -4514416 + (TAAAA)n Simple_repeat Simple_repeat 3 40 0 1 771 3831 11 34 2 chrUextra 24490240 24490372 -4514284 + QUASIMODO_I LTR Gypsy 335 481 -5579 1 771 34 24 0 0 chrUextra 24490616 24490657 -4513999 + AT_rich Low_complexity Low_complexity 1 41 0 1 771 21 95 0 0 chrUextra 24490870 24490933 -4513723 + AT_rich Low_complexity Low_complexity 1 63 0 1 771 1450 0 0 0 chrUextra 24490945 24491112 -4513544 + LSU-rRNA_Dme rRNA rRNA 1 167 -3733 1 771 3505 79 64 28 chrUextra 24491213 24491852 -4512804 + STALKER4_I LTR Gypsy 773 1434 -5096 1 771 2370 176 30 13 chrUextra 24491955 24492592 -4512064 + SAR_DM Satellite Satellite 1 647 -396 1 771 5149 2 0 2 chrUextra 24492692 24493286 -4511370 + LSU-rRNA_Dme rRNA rRNA 2040 2632 -1268 1 771 392 0 0 0 chrUextra 24493286 24493332 -4511324 + R1_DM LINE R1 1 46 -5310 1 771 4735 39 3 2 chrUextra 24493433 24494072 -4510584 + ZAM_I LTR Gypsy 5370 6009 -1481 1 771 2803 176 7 5 chrUextra 24494189 24494800 -4509856 + SAR_DM Satellite Satellite 326 937 -535 1 771 2106 48 0 0 chrUextra 24494912 24495184 -4509472 + DM1731_LTR LTR Copia 65 336 0 1 771 3177 0 3 0 chrUextra 24495184 24495552 -4509104 + DM1731_I LTR Copia 1 369 -3607 1 771 2908 172 8 9 chrUextra 24495657 24496292 -4508364 - SAR_DM Satellite Satellite -425 1047 414 1 771 2941 166 11 9 chrUextra 24497132 24497770 -4506886 - SAR_DM Satellite Satellite -488 984 346 1 771 5241 0 3 3 chrUextra 24497872 24498512 -4506144 - MAX_I LTR Pao -6772 1142 503 1 771 368 23 0 0 chrUextra 24498612 24498656 -4506000 - NTS_DM Other Other -196 44 1 1 771 1756 17 17 17 chrUextra 24498656 24498896 -4505760 - NTS_DM Other Other 0 240 1 1 771 1737 21 17 17 chrUextra 24498896 24499136 -4505520 - NTS_DM Other Other 0 240 1 1 771 650 36 35 35 chrUextra 24499136 24499252 -4505404 - NTS_DM Other Other 0 240 125 1 771 4412 42 0 77 chrUextra 24499352 24499992 -4504664 + R1_DM LINE R1 1278 1868 -3488 1 771 32 0 0 0 chrUextra 24500330 24500362 -4504294 + AT_rich Low_complexity Low_complexity 1 32 0 1 771 2132 8 0 0 chrUextra 24500494 24500732 -4503924 + SSU-rRNA_Dme rRNA rRNA 1 238 -1757 1 771 3194 165 9 8 chrUextra 24500832 24501472 -4503184 + SAR_DM Satellite Satellite 376 1016 -456 1 771 5520 27 0 0 chrUextra 24501572 24502212 -4502444 + DIVER_I LTR Pao 1454 2093 -3550 1 771 5701 0 3 5 chrUextra 24502312 24502952 -4501704 - SSU-rRNA_Dme rRNA rRNA -593 1402 764 1 771 4411 102 36 6 chrUextra 24503052 24503692 -4500964 - Gypsy12_I LTR Gypsy -3436 2110 1452 1 771 5837 0 0 2 chrUextra 24503792 24504432 -4500224 + SSU-rRNA_Dme rRNA rRNA 392 1030 -965 1 771 5411 31 0 2 chrUextra 24504532 24505172 -4499484 - R1_DM LINE R1 -2448 2908 2270 1 771 5560 16 0 0 chrUextra 24505272 24505912 -4498744 + DMRT1B LINE R1 2697 3336 -1847 1 771 368 303 14 43 chrUextra 24506314 24506521 -4498135 - BLASTOPIA_I LTR Gypsy -740 3741 3541 1 771 2716 191 22 23 chrUextra 24506752 24507392 -4497264 - SAR_DM Satellite Satellite -1091 639 1 1 771 5579 2 0 2 chrUextra 24508232 24508872 -4495784 + ROO_I LTR Pao 3096 3734 -4522 1 771 3187 211 41 24 chrUextra 24508977 24510352 -4494304 - SAR_DM Satellite Satellite -478 1398 1 1 96 4440 6 0 2 chrUextra 24510452 24510962 -4493694 + DOC LINE Jockey 4215 4723 -2 1 772 235 0 0 0 chrUextra 24510962 24510988 -4493668 - ROO_I LTR Pao -4037 4219 4194 1 772 805 21 0 0 chrUextra 24510998 24511092 -4493564 + FW_DM LINE Jockey 1750 1843 -2849 1 772 2859 175 21 8 chrUextra 24511202 24511831 -4492825 + SAR_DM Satellite Satellite 195 831 -641 1 772 2864 175 29 8 chrUextra 24511932 24512554 -4492102 + SAR_DM Satellite Satellite 442 1076 -396 1 772 5622 2 0 2 chrUextra 24512696 24513312 -4491344 + SSU-rRNA_Dme rRNA rRNA 1 615 -1380 1 772 861 94 0 0 chrUextra 24513412 24513539 -4491117 - ARS406_DM Unknown Unknown -226 127 1 1 772 2674 179 10 11 chrUextra 24513443 24514052 -4490604 + SAR_DM Satellite Satellite 192 799 -673 1 772 2364 116 15 20 chrUextra 24514892 24515498 -4489158 - DMSAT6 Satellite Satellite -71 603 1 1 772 2576 175 6 6 chrUextra 24515634 24516272 -4488384 + SAR_DM Satellite Satellite 1 638 -416 1 772 633 129 17 0 chrUextra 24516372 24516488 -4488168 - ARS406_DM Unknown Unknown -235 118 1 1 772 2647 179 18 13 chrUextra 24516398 24517008 -4487648 + SAR_DM Satellite Satellite 198 810 -662 1 772 643 20 39 39 chrUextra 24517112 24517215 -4487441 + NTS_DM Other Other 138 240 0 1 772 1813 21 17 17 chrUextra 24517215 24517455 -4487201 + NTS_DM Other Other 1 240 0 1 772 1835 17 17 17 chrUextra 24517455 24517695 -4486961 + NTS_DM Other Other 1 240 0 1 772 478 18 18 0 chrUextra 24517695 24517752 -4486904 + NTS_DM Other Other 1 58 -182 1 772 3953 137 5 0 chrUextra 24517887 24518492 -4486164 - HMSBEAGLE_I LTR Gypsy -4075 2454 1847 1 772 2994 168 13 11 chrUextra 24518598 24519230 -4485426 - SAR_DM Satellite Satellite -514 958 326 1 772 3217 163 9 8 chrUextra 24519332 24519970 -4484686 - SAR_DM Satellite Satellite -457 1015 377 1 772 2986 170 11 11 chrUextra 24520073 24520709 -4483947 - SAR_DM Satellite Satellite -645 827 192 1 772 5319 27 5 0 chrUextra 24520812 24521451 -4483205 + IDEFIX_I LTR Gypsy 2221 2862 -2766 1 772 2855 181 25 8 chrUextra 24521553 24522192 -4482464 + SAR_DM Satellite Satellite 212 861 -611 1 772 441 0 0 0 chrUextra 24522292 24522342 -4482314 - R1_DM LINE R1 -5306 50 1 1 772 5114 3 0 5 chrUextra 24522359 24522932 -4481724 - LSU-rRNA_Dme rRNA rRNA -1237 2663 2094 1 772 2927 180 11 8 chrUextra 24523032 24523669 -4480987 - SAR_DM Satellite Satellite -488 984 346 1 772 684 0 0 0 chrUextra 24523772 24523848 -4480808 + (GAGAA)n Simple_repeat Simple_repeat 2 77 0 1 772 5630 0 3 0 chrUextra 24524512 24525152 -4479504 + ROO_I LTR Pao 921 1562 -6694 1 772 1422 95 13 4 chrUextra 24525252 24525485 -4479171 + S_DM DNA Tc1 186 420 -1316 1 772 1538 74 0 0 chrUextra 24525484 24525714 -4478942 + S_DM DNA Tc1 1507 1736 0 1 772 976 52 7 0 chrUextra 24525714 24525842 -4478814 + CIRCE LINE Composite 4493 4621 -1735 1 772 417 74 0 0 chrUextra 24525838 24525892 -4478764 + CIRCE LINE Composite 4838 4891 -1465 1 772 2488 100 16 27 chrUextra 24525992 24526632 -4478024 + DMSAT6 Satellite Satellite 1 633 -64 1 772 1497 26 0 26 chrUextra 24526732 24526926 -4477730 + R1_DM LINE R1 3898 4086 -1270 1 772 3760 29 5 0 chrUextra 24526924 24527372 -4477284 + R1_DM LINE R1 4559 5008 -348 1 772 335 114 31 20 chrUextra 24527473 24527571 -4477085 + MDG1_I LTR Gypsy 6433 6531 -65 1 772 360 82 0 103 chrUextra 24527603 24527711 -4476945 + MDG1_I LTR Gypsy 6530 6596 0 1 772 1515 37 0 0 chrUextra 24527726 24528112 -4476544 + (TAA)n Simple_repeat Simple_repeat 1 386 0 1 772 5807 2 2 0 chrUextra 24528212 24528852 -4475804 + LSU-rRNA_Dme rRNA rRNA 1972 2612 -1288 1 772 32 0 0 0 chrUextra 24529077 24529109 -4475547 + AT_rich Low_complexity Low_complexity 1 32 0 1 772 3154 3 0 3 chrUextra 24529241 24529592 -4475064 + SSU-rRNA_Dme rRNA rRNA 1 350 -1645 1 772 3127 163 13 9 chrUextra 24529695 24530331 -4474325 + SAR_DM Satellite Satellite 369 1006 -466 1 772 2982 171 8 7 chrUextra 24530452 24531059 -4473597 + SAR_DM Satellite Satellite 326 933 -539 1 772 5359 28 0 0 chrUextra 24531170 24531809 -4472847 + HETA LINE telomeric 2582 3220 -2861 1 772 2978 172 11 11 chrUextra 24531909 24532545 -4472111 - SAR_DM Satellite Satellite -570 902 267 1 772 3171 156 9 16 chrUextra 24532649 24533287 -4471369 + SAR_DM Satellite Satellite 400 1033 -439 1 772 340 70 0 0 chrUextra 24533387 24533430 -4471226 - IDEFIX_I LTR Gypsy -3920 1708 1666 1 772 33 0 0 0 chrUextra 24533861 24533894 -4470762 + AT_rich Low_complexity Low_complexity 1 33 0 1 772 854 10 0 10 chrUextra 24534126 24534227 -4470429 - 5S_DM RNA RNA -35 100 1 1 772 1222 7 0 0 chrUextra 24534454 24534589 -4470067 - 5S_DM RNA RNA 0 135 1 1 772 3298 153 11 9 chrUextra 24534865 24535503 -4469153 + SAR_DM Satellite Satellite 382 1020 -452 1 772 5522 0 0 2 chrUextra 24535604 24536229 -4468427 + ROO_I LTR Pao 5596 6219 -2037 1 772 5629 9 0 2 chrUextra 24536343 24536982 -4467674 - R1_DM LINE R1 -868 4488 3851 1 772 5002 45 27 2 chrUextra 24537082 24537721 -4466935 - R1_DM LINE R1 -4079 1277 623 1 772 1154 15 0 0 chrUextra 24537821 24537953 -4466703 - Gypsy6_LTR LTR Gypsy -275 132 1 1 772 2494 161 12 8 chrUextra 24537956 24538456 -4466200 + SAR_DM Satellite Satellite 536 1037 -435 1 772 3419 46 53 0 chrUextra 24538744 24539198 -4465458 - PROTOP_A DNA P 0 1105 628 1 772 907 9 0 27 chrUextra 24539311 24539423 -4465233 - NTS_DM Other Other -107 133 25 1 772 1304 18 0 6 chrUextra 24539475 24539640 -4465016 - NTS_DM Other Other -39 201 38 1 772 877 9 0 35 chrUextra 24539640 24539753 -4464903 - NTS_DM Other Other -107 133 25 1 772 22 56 0 0 chrUextra 24539779 24539815 -4464841 + AT_rich Low_complexity Low_complexity 1 36 0 1 772 269 125 0 0 chrUextra 24539828 24539868 -4464788 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 772 5443 22 3 0 chrUextra 24540038 24540677 -4463979 + FW_DM LINE Jockey 3900 4540 -152 1 772 1771 174 14 8 chrUextra 24540777 24541415 -4463241 - SAR_DM Satellite Satellite -828 641 1 1 772 2752 183 12 24 chrUextra 24541516 24542154 -4462502 + SAR_DM Satellite Satellite 473 1103 -369 1 772 2440 104 8 39 chrUextra 24542255 24542890 -4461766 + DMSAT6 Satellite Satellite 1 615 -97 1 772 5169 19 3 5 chrUextra 24542994 24543633 -4461023 + PROTOP_A DNA P 286 923 -182 1 772 1560 0 25 15 chrUextra 24543734 24543935 -4460721 + NTS_DM Other Other 38 240 0 1 772 1940 0 17 13 chrUextra 24543935 24544174 -4460482 + NTS_DM Other Other 1 240 0 1 772 1656 20 0 0 chrUextra 24544174 24544372 -4460284 + NTS_DM Other Other 1 198 -42 1 772 5609 3 0 0 chrUextra 24544472 24545111 -4459545 + LSU-rRNA_Dme rRNA rRNA 268 906 -2994 1 772 2536 118 9 9 chrUextra 24545211 24545850 -4458806 + DMSAT6 Satellite Satellite 1 639 -119 1 772 3303 0 0 0 chrUextra 24545950 24546308 -4458348 - ROO_LTR LTR Pao -70 358 1 1 772 5398 27 0 2 chrUextra 24546689 24547328 -4457328 + NINJA_I LTR Pao 2198 2835 -3176 1 772 2812 191 3 20 chrUextra 24547430 24548067 -4456589 - SAR_DM Satellite Satellite -382 1090 465 1 772 3182 160 12 9 chrUextra 24548167 24548806 -4455850 + SAR_DM Satellite Satellite 379 1019 -453 1 772 256 59 0 0 chrUextra 24548907 24548941 -4455715 + HETA LINE telomeric 6045 6078 -3 1 772 1463 171 14 78 chrUextra 24548987 24549425 -4455231 + TAHRE LINE telomeric 20 429 -10034 1 772 654 168 8 0 chrUextra 24549425 24549544 -4455112 + TAHRE LINE telomeric 843 962 -9501 1 772 695 11 23 0 chrUextra 24549645 24549732 -4454924 + (TTATA)n Simple_repeat Simple_repeat 2 90 0 1 772 1547 8 0 4 chrUextra 24549743 24549983 -4454673 + (TTATA)n Simple_repeat Simple_repeat 1 239 0 1 772 2617 20 0 0 chrUextra 24549983 24550284 -4454372 - BEL_LTR LTR Pao 0 361 61 1 772 777 11 0 0 chrUextra 24550384 24550474 -4454182 + (GAGAA)n Simple_repeat Simple_repeat 4 93 0 1 772 591 14 0 40 chrUextra 24551123 24551197 -4453459 - NTS_DM Other Other -145 95 25 1 772 1304 18 0 6 chrUextra 24551249 24551414 -4453242 - NTS_DM Other Other -39 201 38 1 772 907 9 0 27 chrUextra 24551414 24551526 -4453130 - NTS_DM Other Other -107 133 25 1 772 22 56 0 0 chrUextra 24551552 24551588 -4453068 + AT_rich Low_complexity Low_complexity 1 36 0 1 772 269 125 0 0 chrUextra 24551601 24551641 -4453015 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 772 262 150 0 0 chrUextra 24551684 24551724 -4452932 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 772 1738 183 8 39 chrUextra 24551877 24552240 -4452416 - TART LINE telomeric -4022 10455 10104 1 772 333 268 24 2 chrUextra 24552275 24552380 -4452276 - TAHRE LINE telomeric -3256 7207 7118 1 772 3075 168 11 9 chrUextra 24552601 24553240 -4451416 + SAR_DM Satellite Satellite 387 1026 -446 1 772 5453 20 24 0 chrUextra 24553340 24553979 -4450677 + R1_DM LINE R1 2886 3539 -1817 1 772 28 48 0 0 chrUextra 24554382 24554424 -4450232 + AT_rich Low_complexity Low_complexity 1 42 0 1 772 466 0 0 18 chrUextra 24554818 24554873 -4449783 - NTS_DM Other Other -186 54 1 1 772 1930 4 17 13 chrUextra 24554873 24555112 -4449544 - NTS_DM Other Other 0 240 1 1 772 1813 21 17 17 chrUextra 24555112 24555352 -4449304 - NTS_DM Other Other 0 240 1 1 772 636 30 38 38 chrUextra 24555352 24555457 -4449199 - NTS_DM Other Other 0 240 136 1 772 5714 14 0 0 chrUextra 24555557 24556196 -4448460 + BATUMI_I LTR Pao 5062 5700 -2263 1 772 2236 185 9 6 chrUextra 24556296 24556933 -4447723 - SAR_DM Satellite Satellite -736 638 1 1 772 2699 181 13 11 chrUextra 24557037 24557673 -4446983 + SAR_DM Satellite Satellite 224 860 -612 1 772 2339 95 37 18 chrUextra 24557774 24558394 -4446262 + DMSAT6 Satellite Satellite 1 631 -281 1 772 692 60 0 0 chrUextra 24558514 24558614 -4446042 + ARS406_DM Unknown Unknown 59 158 -195 1 772 2638 155 6 6 chrUextra 24558621 24559152 -4445504 - SAR_DM Satellite Satellite -569 903 373 1 772 1130 61 12 41 chrUextra 24559255 24559427 -4445229 + Baggins1 LINE LOA 5025 5191 -262 1 772 606 157 0 0 chrUextra 24559993 24560152 -4444504 + (CA)n Simple_repeat Simple_repeat 2 160 0 1 772 3128 18 0 2 chrUextra 24560155 24560630 -4444026 + DMRT1B LINE R1 1108 1687 -3496 1 772 4732 53 14 3 chrUextra 24560730 24561369 -4443287 + R1_DM LINE R1 237 882 -4474 1 772 5099 19 20 0 chrUextra 24561471 24562108 -4442548 + DOC2_DM LINE Jockey 1065 1714 -3079 1 772 5434 2 2 5 chrUextra 24562208 24562847 -4441809 - LSU-rRNA_Dme rRNA rRNA -2262 1638 1002 1 772 5239 14 3 0 chrUextra 24562947 24563575 -4441081 + Gypsy4_I LTR Gypsy 4138 4767 -1521 1 772 2460 29 3 0 chrUextra 24563686 24563997 -4440659 + R1_DM LINE R1 4755 5066 -290 1 772 954 26 0 0 chrUextra 24563994 24564108 -4440548 + R1_DM LINE R1 5243 5356 0 1 772 1208 60 6 0 chrUextra 24564141 24564308 -4440348 + R1_DM LINE R1 1 168 -5188 1 772 5265 0 2 3 chrUextra 24564425 24565064 -4439592 + ROO_I LTR Pao 621 1258 -6998 1 772 263 114 0 22 chrUextra 24565164 24565209 -4439447 - HETRP_DM Satellite Satellite -300 1572 1529 1 772 652 186 7 14 chrUextra 24565373 24565515 -4439141 - HETRP_DM Satellite Satellite -203 1669 1529 1 772 655 186 7 14 chrUextra 24565655 24565797 -4438859 - HETRP_DM Satellite Satellite -203 1669 1529 1 772 1580 0 0 6 chrUextra 24565906 24566087 -4438569 + (CAAGA)n Simple_repeat Simple_repeat 1 180 0 1 772 457 0 0 0 chrUextra 24566642 24566695 -4437961 - ROO_LTR LTR Pao -375 53 1 1 772 1131 122 6 0 chrUextra 24567060 24567240 -4437416 + DMRT1C LINE R1 475 655 -4788 1 772 251 122 0 0 chrUextra 24567240 24567281 -4437375 + DMRT1B LINE R1 65 105 -5078 1 772 292 306 48 48 chrUextra 24568550 24568756 -4435900 + Copia2_I LTR Copia 1392 1684 -2478 1 772 5134 22 0 9 chrUextra 24568859 24569498 -4435158 - R1_DM LINE R1 -2162 3194 2562 1 772 468 0 0 0 chrUextra 24569598 24569650 -4435006 + (TTGTG)n Simple_repeat Simple_repeat 4 55 0 1 772 504 0 0 0 chrUextra 24570345 24570401 -4434255 + (TTCTC)n Simple_repeat Simple_repeat 3 58 0 1 772 792 0 0 0 chrUextra 24571076 24571164 -4433492 + (GAGAA)n Simple_repeat Simple_repeat 2 89 0 1 772 30 45 0 0 chrUextra 24571972 24572016 -4432640 + AT_rich Low_complexity Low_complexity 1 44 0 1 772 703 40 60 0 chrUextra 24572162 24572262 -4432394 - DNAREP1_DM LINE Penelope -488 106 1 1 772 41 72 0 0 chrUextra 24572360 24572443 -4432213 + AT_rich Low_complexity Low_complexity 1 83 0 1 772 1893 87 141 17 chrUextra 24572554 24573193 -4431463 + Gypsy12_I LTR Gypsy 4674 5391 -155 1 772 30 45 0 0 chrUextra 24573821 24573865 -4430791 + AT_rich Low_complexity Low_complexity 1 44 0 1 772 3563 2 2 0 chrUextra 24574032 24574452 -4430204 + Stalker2_LTR LTR Gypsy 4 424 0 1 772 1849 5 5 0 chrUextra 24574452 24574671 -4429985 + Stalker2_I LTR Gypsy 1 220 -7182 1 772 5028 34 9 0 chrUextra 24574771 24575410 -4429246 - R1_DM LINE R1 -2148 3208 2564 1 772 3669 16 2 0 chrUextra 24575512 24575955 -4428701 + FW_DM LINE Jockey 1750 2193 -2499 1 772 1549 20 0 0 chrUextra 24575954 24576149 -4428507 + FW_DM LINE Jockey 2600 2794 -1898 1 772 4121 41 45 9 chrUextra 24576249 24576888 -4427768 + PROTOP DNA P 133 750 -3730 1 772 4549 4 2 0 chrUextra 24576988 24577527 -4427129 + IDEFIX_LTR LTR Gypsy 55 594 0 1 772 5329 0 0 3 chrUextra 24577727 24578366 -4426290 + ROO_I LTR Pao 3056 3692 -4564 1 772 28 71 0 0 chrUextra 24578580 24578636 -4426020 + AT_rich Low_complexity Low_complexity 1 56 0 1 772 29 47 0 0 chrUextra 24578674 24578717 -4425939 + AT_rich Low_complexity Low_complexity 1 43 0 1 772 28 71 0 0 chrUextra 24578761 24578817 -4425839 + AT_rich Low_complexity Low_complexity 1 56 0 1 772 703 67 235 0 chrUextra 24578956 24579105 -4425551 - PROTOP_A DNA P -592 513 330 1 772 4961 46 2 5 chrUextra 24579205 24579844 -4424812 + BATUMI_I LTR Pao 3493 4129 -3834 1 772 2396 196 20 11 chrUextra 24579945 24580581 -4424075 - SAR_DM Satellite Satellite -1067 641 1 1 772 732 8 273 16 chrUextra 24580683 24580804 -4423852 + DIVER2_I LTR Pao 669 820 -3327 1 772 3759 35 19 52 chrUextra 24580784 24581322 -4423334 + DIVER2_I LTR Pao 1220 1739 -2408 1 772 22 70 0 0 chrUextra 24581473 24581516 -4423140 + AT_rich Low_complexity Low_complexity 1 43 0 1 772 1003 100 251 0 chrUextra 24581606 24581865 -4422791 + DNAREP1_DM LINE Penelope 271 594 0 1 772 34 24 0 0 chrUextra 24582411 24582452 -4422204 + AT_rich Low_complexity Low_complexity 1 41 0 1 772 2327 101 55 12 chrUextra 24582900 24583539 -4421117 - DMSAT6 Satellite Satellite -284 665 1 1 772 2283 96 12 33 chrUextra 24583639 24584278 -4420378 + DMSAT6 Satellite Satellite 1 625 -51 1 772 2166 108 6 52 chrUextra 24584378 24585017 -4419639 - DMSAT6 Satellite Satellite 0 609 1 1 772 3370 78 11 6 chrUextra 24585119 24585711 -4418945 - G2_DM LINE Jockey -2702 400 4 1 772 344 21 0 0 chrUextra 24585709 24585756 -4418900 + STALKER4_I LTR Gypsy 6458 6504 -26 1 772 5059 25 3 2 chrUextra 24585856 24586488 -4418168 - FW_DM LINE Jockey -1804 2888 2256 1 772 2920 156 10 10 chrUextra 24586596 24587213 -4417443 - SAR_DM Satellite Satellite -478 994 378 1 772 2679 183 25 8 chrUextra 24587334 24587967 -4416689 + SAR_DM Satellite Satellite 294 937 -535 1 772 2484 189 8 22 chrUextra 24588073 24588702 -4415954 + SAR_DM Satellite Satellite 499 1118 -354 1 772 314 202 0 21 chrUextra 24588616 24588712 -4415944 - XDMR_DM Unknown Unknown 0 360 267 1 772 3156 0 0 0 chrUextra 24588858 24589218 -4415438 - DMRT1B LINE R1 0 5183 4824 1 772 224 205 0 0 chrUextra 24589227 24589266 -4415390 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 772 192 77 0 0 chrUextra 24589425 24589451 -4415205 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 772 4527 6 0 0 chrUextra 24589551 24590077 -4414579 + R1_DM LINE R1 4831 5356 0 1 772 1000 9 0 0 chrUextra 24590075 24590190 -4414466 + LSU-rRNA_Dme rRNA rRNA 2640 2754 -1146 1 772 28 48 0 0 chrUextra 24590574 24590616 -4414040 + AT_rich Low_complexity Low_complexity 1 42 0 1 772 934 27 0 0 chrUextra 24591029 24591141 -4413515 + R1_DM LINE R1 5243 5354 -2 1 772 3565 71 4 4 chrUextra 24591176 24591668 -4412988 + R1_DM LINE R1 1 492 -4864 1 772 4741 38 2 16 chrUextra 24591768 24592407 -4412249 - BATUMI_I LTR Pao -4629 3334 2705 1 772 631 314 46 35 chrUextra 24592621 24593037 -4411619 + GTWIN_I LTR Gypsy 2969 3538 -2883 1 772 2918 165 10 10 chrUextra 24593246 24593871 -4410785 - SAR_DM Satellite Satellite -479 993 369 1 772 3480 37 0 0 chrUextra 24593985 24594415 -4410241 - R1_DM LINE R1 -3530 1826 1397 1 772 1622 35 0 0 chrUextra 24594422 24594624 -4410032 + FW_DM LINE Jockey 1 202 -4490 1 772 5318 8 0 0 chrUextra 24594724 24595363 -4409293 - NINJA_I LTR Pao -4742 1269 631 1 772 1649 169 22 6 chrUextra 24595471 24595833 -4408823 + SAR_DM Satellite Satellite 536 903 -569 1 772 657 53 53 0 chrUextra 24595748 24595843 -4408813 - ARS406_DM Unknown Unknown -164 189 90 1 772 1075 194 4 8 chrUextra 24595848 24596102 -4408554 + SAR_DM Satellite Satellite 496 748 -724 1 772 4792 46 28 5 chrUextra 24596202 24596841 -4407815 + TART LINE telomeric 9724 10377 -4100 1 772 3450 237 11 35 chrUextra 24596942 24598316 -4406340 + SAR_DM Satellite Satellite 1 1340 -404 1 772 2525 161 34 45 chrUextra 24598419 24599058 -4405598 - SAR_DM Satellite Satellite -641 831 200 1 772 977 7 28 21 chrUextra 24599158 24599302 -4405354 + NTS_DM Other Other 96 240 0 1 772 1301 6 0 18 chrUextra 24599302 24599467 -4405189 + NTS_DM Other Other 1 162 -78 1 772 488 119 36 0 chrUextra 24599577 24599661 -4404995 + NTS_DM Other Other 4 90 -150 1 772 2526 174 21 25 chrUextra 24599906 24600533 -4404123 + SAR_DM Satellite Satellite 191 814 -658 1 772 2450 183 5 30 chrUextra 24600640 24601236 -4403420 + SAR_DM Satellite Satellite 496 1076 -396 1 772 2752 179 11 9 chrUextra 24601375 24602014 -4402642 + SAR_DM Satellite Satellite 415 1054 -418 1 772 2921 160 14 14 chrUextra 24602114 24602748 -4401908 - SAR_DM Satellite Satellite -593 879 246 1 772 225 156 0 0 chrUextra 24602708 24602753 -4401903 + ARS406_DM Unknown Unknown 1 45 -308 1 772 2670 179 33 9 chrUextra 24602856 24603492 -4401164 - SAR_DM Satellite Satellite -549 923 273 1 772 2902 174 5 9 chrUextra 24603592 24604231 -4400425 + SAR_DM Satellite Satellite 380 1015 -457 1 772 5297 0 0 27 chrUextra 24604331 24604970 -4399686 - QUASIMODO_I LTR Gypsy -5204 856 235 1 772 5337 9 2 2 chrUextra 24605070 24605709 -4398947 - R1_DM LINE R1 -1102 4254 3616 1 772 1123 57 27 49 chrUextra 24605809 24605993 -4398663 - Gypsy12_I LTR Gypsy -5366 180 1 1 772 328 211 34 34 chrUextra 24606007 24606154 -4398502 - Gypsy12A_LTR LTR Gypsy -553 1727 1581 1 772 852 169 102 31 chrUextra 24606212 24606438 -4398218 - Gypsy12_LTR LTR Gypsy -828 1508 1267 1 772 960 168 33 22 chrUextra 24606568 24606975 -4397681 - SAR_DM Satellite Satellite -680 625 120 1 772 478 197 8 0 chrUextra 24606975 24607092 -4397564 + ARS406_DM Unknown Unknown 1 118 -235 1 772 960 168 33 22 chrUextra 24607092 24607186 -4397470 - SAR_DM Satellite Satellite -680 119 1 1 772 2934 174 6 8 chrUextra 24607287 24607926 -4396730 + SAR_DM Satellite Satellite 407 1044 -428 1 772 5088 28 28 2 chrUextra 24608026 24608665 -4395991 - DMCR1A LINE CR1 -874 3596 2941 1 772 1597 20 93 0 chrUextra 24608765 24608969 -4395687 - PROTOP_B DNA P -930 223 1 1 772 1301 6 0 18 chrUextra 24610295 24610460 -4394196 - NTS_DM Other Other -78 162 1 1 772 1825 8 17 13 chrUextra 24610460 24610699 -4393957 - NTS_DM Other Other 0 240 1 1 772 1328 0 22 16 chrUextra 24610699 24610882 -4393774 - NTS_DM Other Other 0 240 57 1 772 656 0 0 0 chrUextra 24611721 24611792 -4392864 - NTS_DM Other Other -132 108 38 1 772 936 9 0 27 chrUextra 24611792 24611904 -4392752 - NTS_DM Other Other -107 133 25 1 772 22 56 0 0 chrUextra 24611931 24611967 -4392689 + AT_rich Low_complexity Low_complexity 1 36 0 1 772 278 176 0 19 chrUextra 24611980 24612032 -4392624 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 772 268 196 0 19 chrUextra 24612063 24612115 -4392541 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 772 268 196 0 19 chrUextra 24612155 24612207 -4392449 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 772 268 196 0 19 chrUextra 24612247 24612299 -4392357 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 772 5897 2 2 2 chrUextra 24612460 24613099 -4391557 + LSU-rRNA_Dme rRNA rRNA 1980 2618 -1282 1 772 2475 105 9 19 chrUextra 24613199 24613838 -4390818 - DMSAT6 Satellite Satellite -68 632 1 1 772 3066 179 8 6 chrUextra 24613954 24614577 -4390079 + SAR_DM Satellite Satellite 326 949 -523 1 772 5639 5 3 3 chrUextra 24614677 24615316 -4389340 + R1_DM LINE R1 3467 4105 -1251 1 772 202 265 0 0 chrUextra 24616002 24616051 -4388605 + (CAG)n Simple_repeat Simple_repeat 2 50 0 1 772 5763 0 2 5 chrUextra 24616166 24616793 -4387863 - SSU-rRNA_Dme rRNA rRNA 0 1995 1371 1 772 2442 94 6 50 chrUextra 24616895 24617531 -4387125 + DMSAT6 Satellite Satellite 1 607 -85 1 772 5476 27 0 0 chrUextra 24617631 24618267 -4386389 - R1_DM LINE R1 -2259 3097 2462 1 772 5558 22 16 0 chrUextra 24618369 24619007 -4385649 - DMCR1A LINE CR1 -1262 3208 2561 1 772 3944 151 14 0 chrUextra 24619107 24619745 -4384911 + Gypsy5_I LTR Gypsy 5754 6400 -109 1 772 2370 108 44 8 chrUextra 24619845 24620483 -4384173 + DMSAT6 Satellite Satellite 1 661 -46 1 772 318 0 0 0 chrUextra 24620583 24620627 -4384029 + Copia_LTR LTR Copia 233 276 0 1 772 5506 7 0 0 chrUextra 24620627 24621221 -4383435 - MDG3_I LTR Gypsy -4196 790 197 1 772 3401 254 36 33 chrUextra 24621323 24622693 -4381963 + SAR_DM Satellite Satellite 1 1374 -208 1 772 853 0 35 26 chrUextra 24622797 24622913 -4381743 + NTS_DM Other Other 124 240 0 1 772 1967 13 17 13 chrUextra 24622913 24623152 -4381504 + NTS_DM Other Other 1 240 0 1 772 1369 12 0 18 chrUextra 24623152 24623317 -4381339 + NTS_DM Other Other 1 162 -78 1 772 2970 173 14 11 chrUextra 24623536 24624167 -4380489 - SAR_DM Satellite Satellite -645 827 195 1 772 2564 40 3 0 chrUextra 24624273 24624594 -4380062 - TRANSIB2 DNA Transib -2522 322 1 1 772 2681 43 0 9 chrUextra 24624594 24624911 -4379745 - PROTOP_A DNA P -40 1065 752 1 772 415 287 43 16 chrUextra 24625018 24625202 -4379454 - XDMR Unknown Unknown -172 189 1 1 772 1297 276 29 39 chrUextra 24625054 24625615 -4379041 + SAR_DM Satellite Satellite 566 1120 -352 1 772 5294 46 2 2 chrUextra 24625750 24626387 -4378269 + R1_DM LINE R1 991 1627 -3729 1 772 501 129 23 12 chrUextra 24626491 24626577 -4378079 - NTS_DM Other Other -150 90 4 1 772 1401 6 0 18 chrUextra 24626688 24626853 -4377803 - NTS_DM Other Other -78 162 1 1 772 1992 4 17 13 chrUextra 24626853 24627092 -4377564 - NTS_DM Other Other 0 240 1 1 772 5635 14 0 14 chrUextra 24627225 24627863 -4376793 - Gypsy12_I LTR Gypsy -148 5398 4770 1 772 3016 174 8 25 chrUextra 24627963 24628600 -4376056 + SAR_DM Satellite Satellite 465 1090 -382 1 772 5392 30 28 3 chrUextra 24628701 24629339 -4375317 + DMCR1A LINE CR1 3029 3682 -788 1 772 3257 164 14 9 chrUextra 24629439 24630077 -4374579 - SAR_DM Satellite Satellite -456 1016 376 1 772 2398 123 8 32 chrUextra 24630180 24630815 -4373841 - DMSAT6 Satellite Satellite -28 619 1 1 772 5797 8 0 0 chrUextra 24630915 24631553 -4373103 + R1_DM LINE R1 4184 4821 -535 1 772 5469 30 2 0 chrUextra 24631653 24632291 -4372365 + R1_DM LINE R1 2728 3366 -1990 1 772 21 89 0 0 chrUextra 24632629 24632685 -4371971 + AT_rich Low_complexity Low_complexity 1 56 0 1 772 2988 0 3 3 chrUextra 24632704 24633029 -4371627 - SSU-rRNA_Dme rRNA rRNA 0 1995 1671 1 772 1620 0 0 0 chrUextra 24633587 24633767 -4370889 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 1 772 5872 3 2 2 chrUextra 24633867 24634505 -4370151 + LSU-rRNA_Dme rRNA rRNA 3005 3642 -258 1 772 4463 8 0 0 chrUextra 24634605 24635095 -4369561 + R1_DM LINE R1 4867 5356 0 1 772 1354 13 0 0 chrUextra 24635093 24635243 -4369413 + LSU-rRNA_Dme rRNA rRNA 2640 2789 -1111 1 772 570 12 0 0 chrUextra 24635343 24635423 -4369233 + FW_DM LINE Jockey 4613 4692 0 1 772 3340 13 3 0 chrUextra 24635419 24635797 -4368859 - POGO DNA Pogo -229 1892 1514 1 772 1749 0 0 0 chrUextra 24635788 24635981 -4368675 - POGO DNA Pogo -1574 547 355 1 772 2810 76 11 19 chrUextra 24636081 24636715 -4367941 - DMSAT6 Satellite Satellite -57 629 1 1 772 227 282 0 0 chrUextra 24636843 24636914 -4367742 + C-rich Low_complexity Low_complexity 1 71 0 1 772 658 25 57 16 chrUextra 24637557 24637679 -4366977 + (TAA)n Simple_repeat Simple_repeat 2 128 0 1 772 4070 19 0 6 chrUextra 24637679 24638195 -4366461 - HMSBEAGLE_I LTR Gypsy -5733 796 284 1 772 3180 166 19 9 chrUextra 24638295 24638929 -4365727 - SAR_DM Satellite Satellite -587 885 246 1 772 21 89 0 0 chrUextra 24639187 24639243 -4365413 + AT_rich Low_complexity Low_complexity 1 56 0 1 772 3792 2 2 0 chrUextra 24639262 24639671 -4364985 - SSU-rRNA_Dme rRNA rRNA 0 1995 1586 1 772 5537 22 5 0 chrUextra 24639771 24640407 -4364249 + Gypsy4_I LTR Gypsy 4129 4767 -1521 1 772 3139 159 14 16 chrUextra 24640509 24641147 -4363509 - SAR_DM Satellite Satellite -539 933 297 1 96 2638 82 27 22 chrUextra 24641251 24641873 -4362783 + DMSAT6 Satellite Satellite 1 624 -29 1 773 681 123 0 0 chrUextra 24641985 24642091 -4362565 + (TA)n Simple_repeat Simple_repeat 1 106 0 1 773 4609 6 0 0 chrUextra 24642093 24642600 -4362056 - DM176_LTR LTR Gypsy 0 507 1 1 773 5687 5 2 2 chrUextra 24642726 24643361 -4361295 - R1_DM LINE R1 -1157 4199 3565 1 773 784 89 16 8 chrUextra 24643461 24643585 -4361071 - ARS406_DM Unknown Unknown -228 125 1 1 773 2866 182 16 7 chrUextra 24643491 24644099 -4360557 + SAR_DM Satellite Satellite 195 808 -664 1 773 988 81 6 17 chrUextra 24644199 24644828 -4359828 + RSP Satellite Satellite 1 622 0 1 773 4390 59 64 47 chrUextra 24644937 24645575 -4359081 + ROOA_I LTR Pao 2116 2764 -4085 1 773 3095 172 8 8 chrUextra 24645675 24646295 -4358361 + SAR_DM Satellite Satellite 457 1076 -396 1 773 331 50 0 144 chrUextra 24647153 24647341 -4357315 + (CAAGA)n Simple_repeat Simple_repeat 2 162 0 1 773 376 0 0 167 chrUextra 24647320 24647535 -4357121 + (ACATG)n Simple_repeat Simple_repeat 2 180 0 1 773 5842 2 0 5 chrUextra 24647889 24648527 -4356129 - LSU-rRNA_Dme rRNA rRNA -773 3127 2493 1 773 2096 25 0 0 chrUextra 24648627 24648865 -4355791 - PROTOP_A DNA P -867 238 1 1 773 1362 214 177 50 chrUextra 24649401 24649982 -4354674 - Gypsy12_LTR LTR Gypsy -827 1509 855 1 773 3098 178 12 14 chrUextra 24650103 24650741 -4353915 + SAR_DM Satellite Satellite 284 920 -552 1 773 1890 251 54 17 chrUextra 24650903 24651479 -4353177 + DM297_I LTR Gypsy 3650 4246 -1921 1 773 5767 8 2 0 chrUextra 24651579 24652217 -4352439 + DOC2_DM LINE Jockey 2267 2905 -1888 1 773 787 0 105 0 chrUextra 24652341 24652645 -4352011 + (CAGAC)n Simple_repeat Simple_repeat 1 336 0 1 773 2659 23 0 3 chrUextra 24652646 24652955 -4351701 + DMRT1B LINE R1 1903 2210 -2973 1 773 5723 0 2 3 chrUextra 24653055 24653693 -4350963 - R1_DM LINE R1 -3624 1732 1096 1 773 2761 185 13 25 chrUextra 24654535 24655167 -4349489 + SAR_DM Satellite Satellite 496 1119 -353 1 773 5695 12 0 0 chrUextra 24655269 24655907 -4348749 - FW_DM LINE Jockey -1674 3018 2381 1 773 4117 2 0 0 chrUextra 24656007 24656451 -4348205 - LSU-rRNA_Dme rRNA rRNA -817 3083 2640 1 773 942 10 0 0 chrUextra 24656449 24656551 -4348105 - R1_DM LINE R1 0 5356 5255 1 773 703 26 0 0 chrUextra 24656551 24656629 -4348027 - LSU-rRNA_Dme rRNA rRNA -1245 2655 2578 1 773 4644 2 2 0 chrUextra 24656745 24657245 -4347411 + SSU-rRNA_Dme rRNA rRNA 1495 1995 0 1 773 22 88 0 0 chrUextra 24657264 24657321 -4347335 + AT_rich Low_complexity Low_complexity 1 57 0 1 773 1721 75 50 3 chrUextra 24657483 24657765 -4346891 + TART_B1 LINE telomeric 2111 2405 -8249 1 773 243 32 0 0 chrUextra 24657765 24657796 -4346860 + PROTOP_A DNA P 1 31 -1074 1 773 2648 19 0 46 chrUextra 24657794 24658121 -4346535 + PROTOP_A DNA P 728 1039 -66 1 773 5641 22 0 0 chrUextra 24658221 24658859 -4345797 - FW_DM LINE Jockey -3799 893 256 1 773 600 14 0 0 chrUextra 24658959 24659032 -4345624 + NTS_DM Other Other 61 133 -107 1 773 1350 18 0 6 chrUextra 24659032 24659197 -4345459 + NTS_DM Other Other 38 201 -39 1 773 936 9 0 27 chrUextra 24659249 24659361 -4345295 + NTS_DM Other Other 25 133 -107 1 773 1521 15 25 20 chrUextra 24659361 24659563 -4345093 + NTS_DM Other Other 38 240 0 1 773 274 59 0 0 chrUextra 24659563 24659597 -4345059 + NTS_DM Other Other 1 34 -206 1 773 22 70 0 0 chrUextra 24659707 24659750 -4344906 + AT_rich Low_complexity Low_complexity 1 43 0 1 773 1094 101 252 0 chrUextra 24659843 24660100 -4344556 + DNAREP1_DM LINE Penelope 273 594 0 1 773 447 19 0 0 chrUextra 24660437 24660489 -4344167 + (TTCTC)n Simple_repeat Simple_repeat 1 52 0 1 773 2715 190 18 8 chrUextra 24661173 24661772 -4342884 - SAR_DM Satellite Satellite -676 796 192 1 773 957 89 0 0 chrUextra 24661676 24661811 -4342845 + ARS406_DM Unknown Unknown 1 135 -218 1 773 979 96 47 123 chrUextra 24661911 24662140 -4342516 - Gypsy3_LTR LTR Gypsy -178 242 1 1 773 2428 82 4 8 chrUextra 24662140 24662494 -4342162 - Gypsy3_I LTR Gypsy 0 6177 5892 1 773 2801 182 11 24 chrUextra 24662649 24663285 -4341371 + SAR_DM Satellite Satellite 486 1113 -359 1 773 1431 6 0 0 chrUextra 24663387 24663547 -4341109 - NTS_DM Other Other -80 160 1 1 773 1856 25 17 17 chrUextra 24663547 24663787 -4340869 - NTS_DM Other Other 0 240 1 1 773 1478 35 20 20 chrUextra 24663787 24663990 -4340666 - NTS_DM Other Other 0 240 38 1 773 266 0 0 0 chrUextra 24663990 24664025 -4340631 - NTS_DM Other Other -107 133 99 1 773 2241 0 0 0 chrUextra 24664125 24664375 -4340281 + DM176_I LTR Gypsy 6171 6420 0 1 773 2373 7 0 78 chrUextra 24664375 24664682 -4339974 + DM176_LTR LTR Gypsy 1 283 -224 1 773 638 25 50 0 chrUextra 24664683 24664763 -4339893 + DM176_LTR LTR Gypsy 251 334 -173 1 773 5496 28 0 0 chrUextra 24664863 24665501 -4339155 + R1_DM LINE R1 2080 2717 -2639 1 773 2697 7 3 0 chrUextra 24665601 24665900 -4338756 + DOC2_DM LINE Jockey 3261 3560 -1233 1 773 5315 0 3 42 chrUextra 24666339 24666977 -4337679 + LSU-rRNA_Dme rRNA rRNA 32 644 -3256 1 773 5340 5 2 3 chrUextra 24667077 24667715 -4336941 + R1_DM LINE R1 3350 3986 -1370 1 773 5386 17 3 0 chrUextra 24667815 24668453 -4336203 - Gypsy12_I LTR Gypsy -1052 4494 3855 1 773 4931 31 55 2 chrUextra 24668553 24669191 -4335465 - R1_DM LINE R1 -1886 3470 2799 1 773 3817 0 0 0 chrUextra 24669495 24669929 -4334727 - LSU-rRNA_Dme rRNA rRNA -978 2922 2489 1 773 2700 181 9 9 chrUextra 24670029 24670660 -4333996 + SAR_DM Satellite Satellite 446 1076 -396 1 773 4936 21 52 14 chrUextra 24670767 24671403 -4333253 + FW_DM LINE Jockey 1838 2497 -2195 1 773 1013 175 30 13 chrUextra 24671539 24672137 -4332519 - SAR_DM Satellite Satellite -680 607 1 1 773 508 13 49 37 chrUextra 24672243 24672324 -4332332 + NTS_DM Other Other 159 240 0 1 773 1756 17 17 17 chrUextra 24672324 24672564 -4332092 + NTS_DM Other Other 1 240 0 1 773 1759 17 17 17 chrUextra 24672564 24672804 -4331852 + NTS_DM Other Other 1 240 0 1 773 638 26 0 0 chrUextra 24672804 24672881 -4331775 + NTS_DM Other Other 1 77 -163 1 773 2945 162 16 16 chrUextra 24672981 24673619 -4331037 + SAR_DM Satellite Satellite 378 1015 -457 1 773 4794 41 27 8 chrUextra 24673719 24674357 -4330299 - IVK_DM LINE I -1193 4209 3560 1 773 5134 16 14 0 chrUextra 24674457 24675092 -4329564 + PROTOP_A DNA P 54 697 -408 1 773 2094 170 67 24 chrUextra 24675937 24676558 -4328098 - SAR_DM Satellite Satellite -435 647 1 1 773 2851 220 14 29 chrUextra 24676671 24678032 -4326624 + SAR_DM Satellite Satellite 1 1341 -539 1 773 956 65 0 0 chrUextra 24677909 24678047 -4326609 - ARS406_DM Unknown Unknown -164 189 52 1 773 5076 11 0 0 chrUextra 24678147 24678785 -4325871 - QUASIMODO_I LTR Gypsy -523 5537 4900 1 773 5487 8 2 0 chrUextra 24678885 24679523 -4325133 + Invader1_I LTR Gypsy 1423 2061 -1125 1 773 2296 197 17 22 chrUextra 24679623 24680261 -4324395 + SAR_DM Satellite Satellite 484 1118 -354 1 773 1040 209 27 11 chrUextra 24680362 24680624 -4324032 + TOM_I LTR Gypsy 3759 4024 -2088 1 773 345 229 90 60 chrUextra 24680639 24680839 -4323817 - Gypsy_LTR LTR Gypsy -20 462 257 1 773 4985 14 20 0 chrUextra 24681099 24681737 -4322919 - Invader2_I LTR Gypsy -3919 673 23 1 773 5129 20 2 0 chrUextra 24681837 24682475 -4322181 + STALKER4_I LTR Gypsy 2276 2914 -3616 1 773 2409 158 19 72 chrUextra 24682577 24683171 -4321485 + HETA LINE telomeric 542 1103 -4978 1 773 5415 14 0 0 chrUextra 24684051 24684689 -4319967 - Gypsy6_I LTR Gypsy -29 6983 6346 1 773 2620 188 27 6 chrUextra 24684789 24685427 -4319229 - SAR_DM Satellite Satellite -549 923 273 1 773 5125 33 0 5 chrUextra 24685527 24686165 -4318491 - BATUMI_I LTR Pao -2760 5203 4569 1 773 2530 178 43 19 chrUextra 24686266 24686903 -4317753 + SAR_DM Satellite Satellite 1 652 -270 1 773 5515 0 2 2 chrUextra 24687003 24687638 -4317018 + SSU-rRNA_Dme rRNA rRNA 1334 1968 -27 1 773 2503 180 11 22 chrUextra 24687741 24688366 -4316290 + SAR_DM Satellite Satellite 501 1118 -354 1 773 265 159 32 0 chrUextra 24688312 24688375 -4316281 - XDMR Unknown Unknown 0 361 297 1 773 2732 169 18 11 chrUextra 24688484 24689107 -4315549 + SAR_DM Satellite Satellite 332 958 -514 1 773 5376 2 0 0 chrUextra 24689217 24689855 -4314801 - ROO_I LTR Pao -4669 3587 2950 1 773 5220 31 0 0 chrUextra 24689955 24690593 -4314063 + DIVER_I LTR Pao 1431 2068 -3575 1 773 783 0 11 0 chrUextra 24690693 24690786 -4313870 - SSU-rRNA_Dme rRNA rRNA -1901 94 1 1 773 32 0 0 0 chrUextra 24690918 24690950 -4313706 + AT_rich Low_complexity Low_complexity 1 32 0 1 773 28 48 0 0 chrUextra 24691278 24691320 -4313336 + AT_rich Low_complexity Low_complexity 1 42 0 1 773 2227 4 0 0 chrUextra 24692169 24692425 -4312231 - HOBO DNA hAT -2760 256 1 1 773 1305 0 0 0 chrUextra 24694383 24694528 -4310128 + (GAGAA)n Simple_repeat Simple_repeat 4 148 0 1 773 3859 113 43 0 chrUextra 24695125 24695726 -4308930 - TART_B1 LINE telomeric -5709 4945 4319 1 773 316 51 0 0 chrUextra 24695720 24695759 -4308897 - TART_B1 LINE telomeric -7129 3525 3487 1 773 2904 14 89 0 chrUextra 24695859 24696497 -4308159 + NINJA_I LTR Pao 3332 4026 -1985 1 773 5075 16 5 3 chrUextra 24696597 24697233 -4307423 + ACCORD2_I LTR Gypsy 2903 3539 -3673 1 773 336 0 0 0 chrUextra 24697335 24697380 -4307276 + NTS_DM Other Other 89 133 -107 1 773 1252 18 0 6 chrUextra 24697380 24697545 -4307111 + NTS_DM Other Other 38 201 -39 1 773 848 18 0 27 chrUextra 24697597 24697709 -4306947 + NTS_DM Other Other 25 133 -107 1 773 1417 20 20 20 chrUextra 24697709 24697912 -4306744 + NTS_DM Other Other 38 240 0 1 773 521 16 0 0 chrUextra 24697912 24697973 -4306683 + NTS_DM Other Other 1 61 -179 1 773 1620 13 0 0 chrUextra 24698076 24698388 -4306268 + (CATCT)n Simple_repeat Simple_repeat 1 312 0 1 773 2834 166 21 10 chrUextra 24698818 24699438 -4305218 + SAR_DM Satellite Satellite 332 958 -514 1 773 4123 45 45 0 chrUextra 24700285 24700839 -4303817 + CIRCE LINE Composite 5728 6356 0 1 773 632 36 0 12 chrUextra 24700839 24700922 -4303734 + CIRCE LINE Composite 1 82 -6274 1 773 733 307 92 26 chrUextra 24701039 24701658 -4302998 + Gypsy4_I LTR Gypsy 5021 5680 -608 1 773 5158 22 24 2 chrUextra 24701759 24702396 -4302260 + R1_DM LINE R1 3151 3801 -1555 1 773 1150 7 0 0 chrUextra 24703412 24703547 -4301109 + 5S_DM RNA RNA 1 135 0 1 773 773 31 0 0 chrUextra 24703774 24703870 -4300786 + 5S_DM RNA RNA 1 96 -39 1 773 3620 0 2 0 chrUextra 24703970 24704383 -4300273 + SSU-rRNA_Dme rRNA rRNA 1582 1995 0 1 773 21 89 0 0 chrUextra 24704402 24704458 -4300198 + AT_rich Low_complexity Low_complexity 1 56 0 1 773 5304 0 0 2 chrUextra 24704707 24705344 -4299312 - ROO_I LTR Pao -4722 3534 2899 1 773 2837 179 6 8 chrUextra 24705444 24706081 -4298575 - SAR_DM Satellite Satellite -570 902 267 1 773 323 291 39 8 chrUextra 24706183 24706311 -4298345 - Copia2_I LTR Copia -3464 698 567 1 773 1593 0 5 0 chrUextra 24706918 24707102 -4297554 + LSU-rRNA_Dme rRNA rRNA 2460 2644 -1256 1 773 3956 2 0 0 chrUextra 24707099 24707555 -4297101 + R1_DM LINE R1 4810 5265 -91 1 773 2600 174 33 20 chrUextra 24707656 24708291 -4296365 - SAR_DM Satellite Satellite -563 909 267 1 773 2985 166 9 8 chrUextra 24708392 24709029 -4295627 + SAR_DM Satellite Satellite 348 985 -487 1 773 5277 6 3 3 chrUextra 24709866 24710503 -4294153 - R1_DM LINE R1 -1402 3954 3318 1 773 2798 180 8 5 chrUextra 24710607 24711239 -4293417 + SAR_DM Satellite Satellite 246 879 -593 1 773 3482 258 13 37 chrUextra 24711340 24712711 -4291945 + SAR_DM Satellite Satellite 1 1337 -208 1 773 2423 96 11 31 chrUextra 24712814 24713450 -4291206 + DMSAT6 Satellite Satellite 1 622 -142 1 773 5275 27 0 0 chrUextra 24713551 24714188 -4290468 + DIVER_I LTR Pao 1416 2052 -3591 1 773 4856 16 0 36 chrUextra 24714288 24714925 -4289731 + G_DM LINE Jockey 3438 4051 -295 1 773 435 0 19 0 chrUextra 24715025 24715078 -4289578 - NTS_DM Other Other -186 54 1 1 773 1861 0 17 13 chrUextra 24715078 24715317 -4289339 - NTS_DM Other Other 0 240 1 1 773 1843 4 17 13 chrUextra 24715317 24715556 -4289100 - NTS_DM Other Other 0 240 1 1 773 632 20 38 38 chrUextra 24715556 24715661 -4288995 - NTS_DM Other Other 0 240 136 1 773 2704 175 13 9 chrUextra 24715762 24716397 -4288259 + SAR_DM Satellite Satellite 391 1027 -445 1 773 5347 2 2 2 chrUextra 24716499 24717136 -4287520 - FW_DM LINE Jockey -1423 3269 2633 1 773 2505 184 11 24 chrUextra 24717246 24717870 -4286786 + SAR_DM Satellite Satellite 496 1111 -361 1 773 2418 162 14 9 chrUextra 24717973 24718608 -4286048 - SAR_DM Satellite Satellite -1027 638 1 1 773 5148 19 11 2 chrUextra 24718712 24719347 -4285309 - DOC3_DM LINE Jockey -1397 3343 2703 1 773 5526 0 0 0 chrUextra 24719455 24720084 -4284572 - DIVER_I LTR Pao -4071 1572 944 1 773 4452 16 66 3 chrUextra 24720184 24720821 -4283835 - R1_DM LINE R1 -1359 3997 3321 1 773 2851 170 11 9 chrUextra 24720923 24721558 -4283098 - SAR_DM Satellite Satellite -577 895 260 1 773 212 167 61 0 chrUextra 24721664 24721730 -4282926 + CT-rich Low_complexity Low_complexity 5 74 0 1 773 5393 0 0 3 chrUextra 24722395 24723032 -4281624 + ROO_I LTR Pao 2453 3087 -5169 1 773 2268 101 19 21 chrUextra 24723139 24723769 -4280887 + DMSAT6 Satellite Satellite 1 628 -3 1 773 2890 157 11 16 chrUextra 24723869 24724491 -4280165 - SAR_DM Satellite Satellite -485 987 369 1 773 1649 13 4 9 chrUextra 24724608 24724838 -4279818 + STALKER4_I LTR Gypsy 6302 6530 0 1 773 3206 35 0 2 chrUextra 24724838 24725238 -4279418 + STALKER4_LTR LTR Gypsy 1 399 -3 1 773 2037 12 0 19 chrUextra 24725343 24725604 -4279052 + DOC2_DM LINE Jockey 4538 4793 0 1 773 1716 159 16 8 chrUextra 24725612 24725980 -4278676 - SAR_DM Satellite Satellite -722 750 380 1 773 2439 97 25 16 chrUextra 24726080 24726717 -4277939 - DMSAT6 Satellite Satellite -100 643 1 1 773 3220 101 96 22 chrUextra 24726817 24727454 -4277202 - PROTOP_B DNA P -73 1080 397 1 773 897 173 102 15 chrUextra 24727822 24728027 -4276629 + DMLTR5 LTR Gypsy 44 266 0 1 773 334 66 65 16 chrUextra 24728026 24728088 -4276568 + HMSBEAGLE_I LTR Gypsy 1 65 -6464 1 773 289 107 70 18 chrUextra 24728110 24728167 -4276489 + HMSBEAGLE_I LTR Gypsy 175 234 -6295 1 773 4851 22 3 5 chrUextra 24728291 24728928 -4275728 - TART LINE telomeric -4831 9646 9011 1 773 3569 114 35 5 chrUextra 24729028 24729594 -4275062 - Gypsy12_I LTR Gypsy -3185 2361 1779 1 773 31 26 0 0 chrUextra 24729949 24729987 -4274669 + AT_rich Low_complexity Low_complexity 1 38 0 1 773 1037 51 0 0 chrUextra 24730502 24730639 -4274017 + PROTOP_A DNA P 163 299 -806 1 773 2194 56 91 0 chrUextra 24730626 24731139 -4273517 + PROTOP_A DNA P 520 945 -160 1 773 1611 0 0 0 chrUextra 24731697 24731876 -4272780 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 1 773 1770 138 55 13 chrUextra 24732174 24732571 -4272085 + ROVER-I_DM LTR Gypsy 6153 6566 -18 1 773 2232 124 27 11 chrUextra 24732713 24733349 -4271307 + DMSAT6 Satellite Satellite 1 645 -40 1 773 5300 9 0 0 chrUextra 24734187 24734824 -4269832 - IDEFIX_I LTR Gypsy -3001 2627 1991 1 773 621 193 7 14 chrUextra 24734977 24735119 -4269537 - HETRP_DM Satellite Satellite -203 1669 1529 1 773 681 179 7 14 chrUextra 24735256 24735398 -4269258 - HETRP_DM Satellite Satellite -203 1669 1529 1 773 252 179 36 0 chrUextra 24735675 24735731 -4268925 - TART_B1 LINE telomeric -10155 499 442 1 773 1303 13 0 0 chrUextra 24735765 24735918 -4268738 - TART LINE telomeric -9789 4688 4536 1 773 2980 37 0 0 chrUextra 24735918 24736298 -4268358 - HETA LINE telomeric -1 6080 5701 1 773 2892 0 3 0 chrUextra 24737135 24737479 -4267177 + FW_DM LINE Jockey 4348 4692 0 1 773 2339 31 0 0 chrUextra 24737479 24737772 -4266884 - DOC2_DM LINE Jockey -4037 756 464 1 773 2766 175 11 11 chrUextra 24737872 24738509 -4266147 + SAR_DM Satellite Satellite 432 1068 -404 1 773 2618 178 6 24 chrUextra 24739349 24739983 -4264673 + SAR_DM Satellite Satellite 496 1118 -354 1 773 2953 173 6 8 chrUextra 24740086 24740720 -4263936 - SAR_DM Satellite Satellite -411 1061 429 1 773 2064 0 0 4 chrUextra 24740820 24741074 -4263582 - HMSBEAGLE_I LTR Gypsy -5301 1228 976 1 773 633 51 42 17 chrUextra 24741074 24741194 -4263462 + (TAA)n Simple_repeat Simple_repeat 3 125 0 1 773 1819 23 0 11 chrUextra 24741194 24741457 -4263199 - HMSBEAGLE_I LTR Gypsy -5733 796 537 1 773 2856 176 13 3 chrUextra 24741560 24742194 -4262462 + SAR_DM Satellite Satellite 230 869 -603 1 773 21 89 0 0 chrUextra 24742526 24742582 -4262074 + AT_rich Low_complexity Low_complexity 1 56 0 1 773 23 68 0 0 chrUextra 24742620 24742664 -4261992 + AT_rich Low_complexity Low_complexity 1 44 0 1 773 26 30 0 0 chrUextra 24742710 24742743 -4261913 + AT_rich Low_complexity Low_complexity 1 33 0 1 773 2800 32 60 5 chrUextra 24743031 24743666 -4260990 + PROTOP_A DNA P 435 1104 -1 1 773 5203 25 5 2 chrUextra 24743768 24744405 -4260251 + R1_DM LINE R1 4167 4805 -551 1 773 4971 14 16 0 chrUextra 24744505 24745142 -4259514 - Invader2_I LTR Gypsy -2583 2009 1363 1 773 2331 181 40 27 chrUextra 24745253 24745879 -4258777 - SAR_DM Satellite Satellite -355 1117 484 1 773 28 48 0 0 chrUextra 24746065 24746107 -4258549 + AT_rich Low_complexity Low_complexity 1 42 0 1 773 488 119 36 0 chrUextra 24746382 24746466 -4258190 - NTS_DM Other Other -150 90 4 1 773 2968 171 8 6 chrUextra 24746716 24747353 -4257303 + SAR_DM Satellite Satellite 388 1025 -447 1 773 2970 166 8 8 chrUextra 24747453 24748090 -4256566 - SAR_DM Satellite Satellite -494 978 342 1 773 5109 35 0 5 chrUextra 24748190 24748827 -4255829 - BATUMI_I LTR Pao -2556 5407 4774 1 773 2711 167 36 11 chrUextra 24748927 24749564 -4255092 - SAR_DM Satellite Satellite -451 1021 369 1 773 1270 0 0 0 chrUextra 24750401 24750547 -4254109 + Copia_I LTR Copia 4448 4593 0 1 773 2297 0 0 0 chrUextra 24750547 24750823 -4253833 + Copia_LTR LTR Copia 1 276 0 1 773 905 68 6 17 chrUextra 24751138 24751479 -4253177 - RSP Satellite Satellite -5 337 1 1 773 1620 0 3 0 chrUextra 24751479 24751772 -4252884 + (GAGAA)n Simple_repeat Simple_repeat 1 293 0 1 773 2788 176 9 8 chrUextra 24751876 24752512 -4252144 + SAR_DM Satellite Satellite 282 918 -554 1 773 5515 0 0 3 chrUextra 24752612 24753249 -4251407 + LSU-rRNA_Dme rRNA rRNA 2717 3351 -549 1 773 2870 173 11 8 chrUextra 24753349 24753983 -4250673 - SAR_DM Satellite Satellite -555 917 282 1 773 2871 171 9 9 chrUextra 24754086 24754723 -4249933 - SAR_DM Satellite Satellite -417 1055 419 1 773 5415 5 2 0 chrUextra 24754823 24755460 -4249196 - DOC LINE Jockey -3285 1440 803 1 773 2430 181 70 27 chrUextra 24755563 24756193 -4248463 - SAR_DM Satellite Satellite -610 656 1 1 773 246 150 0 0 chrUextra 24756303 24756343 -4248313 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 773 246 150 0 0 chrUextra 24756395 24756435 -4248221 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 773 22 56 0 0 chrUextra 24756440 24756476 -4248180 + AT_rich Low_complexity Low_complexity 1 36 0 1 773 3366 3 0 0 chrUextra 24756548 24756934 -4247722 - LSU-rRNA_Dme rRNA rRNA 0 3900 3515 1 773 901 272 24 83 chrUextra 24757039 24757532 -4247124 - Gypsy12_LTR LTR Gypsy -1348 988 525 1 773 229 268 0 0 chrUextra 24757544 24757600 -4247056 - Gypsy12_LTR LTR Gypsy -1816 464 409 1 773 2854 169 17 8 chrUextra 24757771 24758408 -4246248 + SAR_DM Satellite Satellite 383 1025 -447 1 773 2502 235 18 25 chrUextra 24758508 24759882 -4244774 + SAR_DM Satellite Satellite 1 1363 -539 1 773 5428 5 2 3 chrUextra 24759982 24760619 -4244037 - SSU-rRNA_Dme rRNA rRNA -444 1551 916 1 773 3025 114 126 33 chrUextra 24760719 24761356 -4243300 + BATUMI_I LTR Pao 850 1545 -6418 1 773 1294 0 0 0 chrUextra 24761456 24761610 -4243046 - NTS_DM Other Other -86 154 1 1 773 1781 13 17 17 chrUextra 24761610 24761850 -4242806 - NTS_DM Other Other 0 240 1 1 773 1705 25 17 17 chrUextra 24761850 24762089 -4242567 - NTS_DM Other Other 0 240 2 1 773 1222 18 0 12 chrUextra 24762193 24762359 -4242297 - NTS_DM Other Other -39 201 38 1 773 870 9 0 27 chrUextra 24762359 24762471 -4242185 - NTS_DM Other Other -107 133 25 1 773 22 56 0 0 chrUextra 24762497 24762533 -4242123 + AT_rich Low_complexity Low_complexity 1 36 0 1 773 255 125 0 0 chrUextra 24762546 24762586 -4242070 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 773 246 150 0 0 chrUextra 24762629 24762669 -4241987 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 773 246 150 0 0 chrUextra 24762721 24762761 -4241895 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 773 2210 89 35 24 chrUextra 24762932 24763567 -4241089 - DMSAT6 Satellite Satellite -48 642 1 1 773 5549 3 0 2 chrUextra 24763667 24764304 -4240352 - Invader4_I LTR Gypsy -1641 772 137 1 773 488 119 36 0 chrUextra 24764404 24764488 -4240168 - NTS_DM Other Other -150 90 4 1 773 1290 6 0 18 chrUextra 24764598 24764763 -4239893 - NTS_DM Other Other -78 162 1 1 773 1829 8 17 13 chrUextra 24764763 24765002 -4239654 - NTS_DM Other Other 0 240 1 1 773 4397 17 0 0 chrUextra 24765141 24765660 -4238996 + Gypsy6_I LTR Gypsy 6494 7012 0 1 773 966 9 0 0 chrUextra 24765662 24765777 -4238879 + Gypsy6_LTR LTR Gypsy 1 115 -292 1 773 5127 27 6 0 chrUextra 24765878 24766515 -4238141 - R1_DM LINE R1 -2070 3286 2646 1 773 2050 191 11 85 chrUextra 24766615 24767249 -4237407 - HETA LINE telomeric -2281 3800 3214 1 773 558 0 0 0 chrUextra 24767357 24767419 -4237237 + (TTCTC)n Simple_repeat Simple_repeat 5 66 0 1 773 4122 4 3 1 chrUextra 24768826 24769462 -4235194 - ROVER-I_DM LTR Gypsy -5778 806 246 1 773 615 200 7 14 chrUextra 24771213 24771355 -4233301 + HETRP_DM Satellite Satellite 1529 1669 -203 1 773 652 179 7 21 chrUextra 24771494 24771637 -4233019 + HETRP_DM Satellite Satellite 1529 1669 -203 1 773 5406 9 2 0 chrUextra 24771770 24772406 -4232250 - DOC2_DM LINE Jockey -793 4000 3364 1 96 2691 162 66 9 chrUextra 24772507 24773142 -4231514 + SAR_DM Satellite Satellite 352 1022 -450 1 774 3320 20 0 33 chrUextra 24773242 24773661 -4230995 + Baggins1 LINE LOA 5049 5453 0 1 774 1906 122 26 0 chrUextra 24774146 24774530 -4230126 - TART_B1 LINE telomeric -8410 2244 1851 1 774 676 24 12 0 chrUextra 24774530 24774614 -4230042 + PROTOP_A DNA P 1 85 -1020 1 774 3177 16 0 0 chrUextra 24774714 24775093 -4229563 + R1_DM LINE R1 1880 2258 -3098 1 774 1905 81 0 0 chrUextra 24775089 24775350 -4229306 + R1_DM LINE R1 1312 1572 -3784 1 774 5436 13 0 0 chrUextra 24775450 24776086 -4228570 - Gypsy4_I LTR Gypsy -3106 3182 2547 1 774 26 74 0 0 chrUextra 24776347 24776401 -4228255 + AT_rich Low_complexity Low_complexity 1 54 0 1 774 359 236 70 85 chrUextra 24776434 24776633 -4228023 - HMSBEAGLE_I LTR Gypsy -6110 419 224 1 774 4951 27 6 14 chrUextra 24776923 24777558 -4227098 - TAHRE LINE telomeric -9597 866 237 1 774 5448 19 2 2 chrUextra 24777658 24778294 -4226362 + STALKER4_I LTR Gypsy 4795 5430 -1100 1 774 2463 108 11 33 chrUextra 24778396 24779030 -4225626 + DMSAT6 Satellite Satellite 1 619 -64 1 774 4925 28 2 0 chrUextra 24779200 24779766 -4224890 + PROTOP DNA P 1 567 -3913 1 774 2373 97 32 22 chrUextra 24780603 24781238 -4223418 + DMSAT6 Satellite Satellite 1 640 -64 1 774 5589 20 0 0 chrUextra 24781341 24781974 -4222682 - FW_DM LINE Jockey -1027 3665 3033 1 774 878 67 0 0 chrUextra 24782074 24782193 -4222463 + ARS406_DM Unknown Unknown 40 158 -195 1 774 2623 174 6 8 chrUextra 24782190 24782710 -4221946 - SAR_DM Satellite Satellite -558 914 396 1 774 393 142 58 80 chrUextra 24782812 24782950 -4221706 + BATUMI_I LTR Pao 635 769 -7194 1 774 2257 117 22 59 chrUextra 24782991 24783446 -4221210 + BATUMI_I LTR Pao 749 1186 -6777 1 774 2709 166 15 31 chrUextra 24783546 24784918 -4219738 - DMSAT6 Satellite Satellite -3 1349 1 1 774 1028 38 0 8 chrUextra 24785018 24785152 -4219504 + (CTTAT)n Simple_repeat Simple_repeat 1 133 0 1 774 3639 97 0 8 chrUextra 24785754 24786245 -4218411 - Gypsy12_I LTR Gypsy -3696 1850 1364 1 774 1011 125 0 0 chrUextra 24786246 24786390 -4218266 - Gypsy12_I LTR Gypsy -2590 2956 2813 1 774 2730 234 14 5 chrUextra 24786490 24787126 -4217530 - TABOR_I LTR Gypsy -1696 4640 3999 1 774 4035 2 4 7 chrUextra 24787226 24787682 -4216974 + LSU-rRNA_Dme rRNA rRNA 1337 1791 -2109 1 774 1306 0 0 0 chrUextra 24787723 24787862 -4216794 + LSU-rRNA_Dme rRNA rRNA 1788 1926 -1974 1 774 3285 63 12 8 chrUextra 24788698 24789179 -4215477 + STALKER4_I LTR Gypsy 6048 6530 0 1 774 1172 42 0 0 chrUextra 24789190 24789334 -4215322 + STALKER4_LTR LTR Gypsy 9 152 -250 1 774 2889 36 0 9 chrUextra 24789434 24789773 -4214883 + DMCR1A LINE CR1 1310 1645 -2825 1 774 2616 24 3 0 chrUextra 24789773 24790070 -4214586 - PROTOP DNA P 0 4480 4183 1 774 919 97 0 0 chrUextra 24790170 24790294 -4214362 - Gypsy12_I LTR Gypsy -766 4780 4657 1 774 1142 29 107 0 chrUextra 24790292 24790432 -4214224 - PROTOP DNA P -4325 155 1 1 774 4093 19 8 0 chrUextra 24790907 24791376 -4213280 + R1_DM LINE R1 4884 5356 0 1 774 1002 75 8 0 chrUextra 24791409 24791542 -4213114 + R1_DM LINE R1 1 134 -5222 1 774 3705 17 94 2 chrUextra 24791642 24792278 -4212378 - R1_DM LINE R1 -42 5314 4620 1 774 5002 8 0 65 chrUextra 24792378 24793013 -4211643 - DM176_I LTR Gypsy -5363 1057 464 1 774 3059 167 11 11 chrUextra 24793863 24794486 -4210170 + SAR_DM Satellite Satellite 366 988 -484 1 774 2951 179 9 11 chrUextra 24794587 24795218 -4209438 - SAR_DM Satellite Satellite -625 847 218 1 774 5365 21 0 0 chrUextra 24795322 24795931 -4208725 - R1_DM LINE R1 -2790 2566 1958 1 774 5876 0 2 3 chrUextra 24796058 24796694 -4207962 + LSU-rRNA_Dme rRNA rRNA 3155 3789 -111 1 774 3045 172 28 8 chrUextra 24796794 24797428 -4207228 - SAR_DM Satellite Satellite -500 972 326 1 774 5173 41 2 3 chrUextra 24797530 24798166 -4206490 + R1_DM LINE R1 710 1344 -4012 1 774 5574 11 3 0 chrUextra 24798266 24798902 -4205754 - DM176_I LTR Gypsy -3869 2551 1914 1 774 5501 27 0 0 chrUextra 24799002 24799638 -4205018 - R1_DM LINE R1 -2171 3185 2550 1 774 5777 3 0 2 chrUextra 24799738 24800374 -4204282 + R1_DM LINE R1 3157 3791 -1565 1 774 5511 14 0 2 chrUextra 24800474 24801110 -4203546 + STALKER4_I LTR Gypsy 2685 3319 -3211 1 774 2939 179 33 10 chrUextra 24801210 24801838 -4202818 - SAR_DM Satellite Satellite -583 889 247 1 774 250 170 0 0 chrUextra 24801799 24801846 -4202810 + ARS406_DM Unknown Unknown 1 47 -306 1 774 782 317 64 28 chrUextra 24801954 24802582 -4202074 + Gypsy5_I LTR Gypsy 3946 5066 -1222 1 774 757 11 0 33 chrUextra 24802682 24802773 -4201883 - NTS_DM Other Other -128 112 25 1 774 1350 18 0 6 chrUextra 24802825 24802990 -4201666 - NTS_DM Other Other -39 201 38 1 774 908 18 0 27 chrUextra 24802990 24803102 -4201554 - NTS_DM Other Other -107 133 25 1 774 1343 18 0 6 chrUextra 24803154 24803318 -4201338 - NTS_DM Other Other -39 201 39 1 774 5713 3 11 0 chrUextra 24803418 24804054 -4200602 + DM176_I LTR Gypsy 2937 3579 -2841 1 774 865 102 0 0 chrUextra 24804154 24804281 -4200375 - ARS406_DM Unknown Unknown -226 127 1 1 774 2843 185 10 8 chrUextra 24804185 24804790 -4199866 + SAR_DM Satellite Satellite 192 797 -675 1 774 5801 3 2 3 chrUextra 24804890 24805526 -4199130 + LSU-rRNA_Dme rRNA rRNA 1014 1648 -2252 1 774 1840 26 13 0 chrUextra 24805627 24805854 -4198802 - BATUMI_I LTR Pao -1307 6656 6427 1 774 3232 18 0 3 chrUextra 24805877 24806262 -4198394 + BATUMI_I LTR Pao 7303 7686 -277 1 774 395 250 118 100 chrUextra 24806451 24806731 -4197925 - Invader1_LTR LTR Gypsy -55 368 84 1 774 321 140 0 34 chrUextra 24806939 24806998 -4197658 + DMLTR5 LTR Gypsy 44 100 -166 1 774 4882 27 2 7 chrUextra 24807142 24807734 -4196922 - R1_DM LINE R1 -957 4399 3811 1 774 1119 88 0 0 chrUextra 24807837 24808145 -4196511 + (CATGT)n Simple_repeat Simple_repeat 1 308 0 1 774 1422 47 0 0 chrUextra 24808145 24808470 -4196186 + (TCTTG)n Simple_repeat Simple_repeat 1 325 0 1 774 1175 21 0 7 chrUextra 24809306 24809451 -4195205 - NTS_DM Other Other -59 181 38 1 774 936 9 0 27 chrUextra 24809451 24809563 -4195093 - NTS_DM Other Other -107 133 25 1 774 278 176 0 19 chrUextra 24809638 24809690 -4194966 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 774 1860 15 0 0 chrUextra 24809736 24809942 -4194714 - R2_DM LINE R2 -1319 2288 2083 1 774 339 230 10 10 chrUextra 24810042 24810143 -4194513 + XDMR_DM Unknown Unknown 260 360 0 1 774 2714 187 7 24 chrUextra 24810058 24810678 -4193978 - SAR_DM Satellite Satellite -354 1118 510 1 774 3645 57 3 124 chrUextra 24810778 24811398 -4193258 + MDG1_I LTR Gypsy 878 1422 -5174 1 774 4527 6 0 0 chrUextra 24811647 24812150 -4192506 + QUASIMODO_LTR LTR Gypsy 1 503 -155 1 774 1158 122 0 0 chrUextra 24812997 24813177 -4191479 + (TA)n Simple_repeat Simple_repeat 1 180 0 1 774 3979 7 0 2 chrUextra 24813179 24813622 -4191034 - DM176_LTR LTR Gypsy 0 507 66 1 774 1620 13 0 0 chrUextra 24813722 24814186 -4190470 + (AGATG)n Simple_repeat Simple_repeat 1 464 0 1 774 232 30 9 116 chrUextra 24814182 24814294 -4190362 + GA-rich Low_complexity Low_complexity 1 100 0 1 774 2885 0 0 73 chrUextra 24814458 24814816 -4189840 - LSU-rRNA_Dme rRNA rRNA -3568 332 1 1 774 21 95 0 0 chrUextra 24814828 24814891 -4189765 + AT_rich Low_complexity Low_complexity 1 63 0 1 774 825 41 0 0 chrUextra 24815194 24815292 -4189364 - DM176_LTR LTR Gypsy -27 480 383 1 774 21 89 0 0 chrUextra 24815323 24815379 -4189277 + AT_rich Low_complexity Low_complexity 1 56 0 1 774 23 68 0 0 chrUextra 24815417 24815461 -4189195 + AT_rich Low_complexity Low_complexity 1 44 0 1 774 26 30 0 0 chrUextra 24815507 24815540 -4189116 + AT_rich Low_complexity Low_complexity 1 33 0 1 774 2528 181 21 22 chrUextra 24815931 24816558 -4188098 + SAR_DM Satellite Satellite 1 626 -378 1 774 3010 185 11 6 chrUextra 24816668 24817299 -4187357 - SAR_DM Satellite Satellite -593 879 246 1 774 3089 179 8 9 chrUextra 24817402 24818038 -4186618 + SAR_DM Satellite Satellite 284 918 -554 1 774 1967 254 6 14 chrUextra 24818138 24818772 -4185884 + Gypsy11_I LTR Gypsy 2757 3385 -139 1 774 1209 22 0 0 chrUextra 24818874 24819011 -4185645 + NINJA_I LTR Pao 5875 6011 0 1 774 2609 32 0 28 chrUextra 24819011 24819334 -4185322 + NINJA_LTR LTR Pao 1 314 -3 1 774 367 0 23 0 chrUextra 24819610 24819654 -4185002 - QUASIMODO_LTR LTR Gypsy -613 45 1 1 774 4901 5 10 0 chrUextra 24819654 24820246 -4184410 - QUASIMODO_I LTR Gypsy 0 6060 5463 1 774 3041 187 6 8 chrUextra 24820351 24820982 -4183674 - SAR_DM Satellite Satellite -425 1047 418 1 774 5556 25 0 0 chrUextra 24821082 24821718 -4182938 - R1_DM LINE R1 -3122 2234 1599 1 774 5449 19 8 0 chrUextra 24821833 24822454 -4182202 - DIVER2_I LTR Pao 0 4147 3522 1 774 453 19 0 0 chrUextra 24822554 24822608 -4182048 + (TTCTC)n Simple_repeat Simple_repeat 4 57 0 1 774 180 0 0 0 chrUextra 24822611 24822631 -4182025 + (AGTTG)n Simple_repeat Simple_repeat 4 23 0 1 774 1578 6 0 0 chrUextra 24822633 24822812 -4181844 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 774 1172 49 0 6 chrUextra 24822839 24823004 -4181652 + (GAGAA)n Simple_repeat Simple_repeat 5 168 0 1 774 1563 11 0 11 chrUextra 24823290 24823470 -4181186 - R2_DM LINE R2 -3427 180 3 1 774 2392 4 0 25 chrUextra 24823468 24823747 -4180909 - LSU-rRNA_Dme rRNA rRNA -1319 2581 2310 1 774 1182 50 25 19 chrUextra 24824026 24824188 -4180468 - DMCR1A LINE CR1 -4307 163 1 1 774 2002 107 36 3 chrUextra 24824176 24824477 -4180179 - MDG1_LTR LTR Gypsy -9 433 123 1 774 383 68 17 0 chrUextra 24824489 24824548 -4180108 + (TTA)n Simple_repeat Simple_repeat 3 62 0 1 774 483 23 14 68 chrUextra 24824565 24824655 -4180001 - MDG1_I LTR Gypsy 0 6596 6523 1 774 5891 0 2 2 chrUextra 24824762 24825398 -4179258 + LSU-rRNA_Dme rRNA rRNA 2431 3066 -834 1 774 5612 6 2 5 chrUextra 24826234 24826870 -4177786 - R1_DM LINE R1 -1522 3834 3201 1 774 1032 40 0 0 chrUextra 24826971 24827096 -4177560 + ARS406_DM Unknown Unknown 65 189 -164 1 774 2175 205 92 25 chrUextra 24827005 24827604 -4177052 - SAR_DM Satellite Satellite -216 1256 618 1 774 3166 164 11 10 chrUextra 24828446 24829072 -4175584 + SAR_DM Satellite Satellite 332 958 -514 1 774 5085 19 0 0 chrUextra 24829183 24829756 -4174900 + PROTOP DNA P 1 571 -3909 1 774 464 33 0 16 chrUextra 24829752 24829814 -4174842 + PROTOP DNA P 3892 3952 -528 1 774 5871 2 0 0 chrUextra 24829914 24830550 -4174106 + FW_DM LINE Jockey 3145 3780 -912 1 774 31 0 0 0 chrUextra 24830658 24830689 -4173967 + AT_rich Low_complexity Low_complexity 1 31 0 1 774 28 48 0 0 chrUextra 24831017 24831059 -4173597 + AT_rich Low_complexity Low_complexity 1 42 0 1 774 5787 3 2 0 chrUextra 24831386 24832022 -4172634 + R1_DM LINE R1 1456 2092 -3264 1 774 1555 0 17 0 chrUextra 24832122 24832294 -4172362 + LSU-rRNA_Dme rRNA rRNA 2480 2654 -1246 1 774 3094 6 0 0 chrUextra 24832291 24832628 -4172028 + R1_DM LINE R1 5020 5356 0 1 774 1213 8 0 0 chrUextra 24832626 24832758 -4171898 + LSU-rRNA_Dme rRNA rRNA 2640 2771 -1129 1 774 5571 16 0 6 chrUextra 24832858 24833494 -4171162 - STALKER4_I LTR Gypsy -1509 5021 4390 1 774 774 0 0 0 chrUextra 24834144 24834230 -4170426 + (TTCTC)n Simple_repeat Simple_repeat 2 87 0 1 774 5430 2 0 0 chrUextra 24834330 24834966 -4169690 + LSU-rRNA_Dme rRNA rRNA 481 1116 -2784 1 774 2791 174 16 11 chrUextra 24835068 24835702 -4168954 - SAR_DM Satellite Satellite -417 1055 419 1 774 1620 0 0 0 chrUextra 24836109 24836438 -4168218 + (TTCTC)n Simple_repeat Simple_repeat 1 329 0 1 774 1559 39 77 0 chrUextra 24836538 24836745 -4167911 - PROTOP_B DNA P -930 223 1 1 774 234 291 12 29 chrUextra 24838168 24838338 -4166318 + (TAAA)n Simple_repeat Simple_repeat 2 168 0 1 774 262 191 43 43 chrUextra 24838488 24838603 -4166053 + A-rich Low_complexity Low_complexity 3 117 0 1 774 5066 11 3 0 chrUextra 24839482 24840118 -4164538 + DM176_I LTR Gypsy 1185 1822 -4598 1 774 1666 15 10 0 chrUextra 24840218 24840424 -4164232 + R1_DM LINE R1 3452 3659 -1697 1 774 3493 30 2 0 chrUextra 24840422 24840854 -4163802 + R1_DM LINE R1 4833 5265 -91 1 774 774 0 0 0 chrUextra 24840954 24841040 -4163616 + (TCTTG)n Simple_repeat Simple_repeat 4 89 0 1 774 208 200 31 0 chrUextra 24842016 24842081 -4162575 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 774 375 0 0 0 chrUextra 24842425 24842468 -4162188 - NTS_DM Other Other -197 43 1 1 774 1861 0 17 13 chrUextra 24842468 24842707 -4161949 - NTS_DM Other Other 0 240 1 1 774 1822 8 17 13 chrUextra 24842707 24842946 -4161710 - NTS_DM Other Other 0 240 1 1 774 761 0 35 26 chrUextra 24842946 24843060 -4161596 - NTS_DM Other Other 0 240 126 1 774 5378 2 0 5 chrUextra 24843160 24843795 -4160861 + R1_DM LINE R1 1653 2284 -3072 1 774 5470 2 2 0 chrUextra 24843895 24844530 -4160126 + FW_DM LINE Jockey 685 1320 -3372 1 774 4414 92 27 3 chrUextra 24844630 24845265 -4159391 + Gypsy12_I LTR Gypsy 3245 3894 -1652 1 774 652 186 7 14 chrUextra 24845559 24845701 -4158955 + HETRP_DM Satellite Satellite 1529 1669 -203 1 774 210 37 0 0 chrUextra 24845859 24845886 -4158770 + (GA)n Simple_repeat Simple_repeat 2 28 0 1 774 491 214 0 9 chrUextra 24845886 24845999 -4158657 + HETRP_DM Satellite Satellite 1549 1660 -212 1 774 5396 13 0 0 chrUextra 24846100 24846735 -4157921 + Gypsy4_I LTR Gypsy 2618 3252 -3036 1 774 2649 182 8 8 chrUextra 24846835 24847450 -4157206 - SAR_DM Satellite Satellite -663 809 195 1 774 675 115 0 0 chrUextra 24847357 24847470 -4157186 + ARS406_DM Unknown Unknown 1 113 -240 1 774 827 0 0 0 chrUextra 24847571 24847665 -4156991 + R1_DM LINE R1 4820 4913 -443 1 774 4725 2 0 0 chrUextra 24847663 24848205 -4156451 - LSU-rRNA_Dme rRNA rRNA -1245 2655 2114 1 774 279 54 0 0 chrUextra 24848895 24848932 -4155724 + (GGAGA)n Simple_repeat Simple_repeat 1 37 0 1 774 2891 170 8 9 chrUextra 24849040 24849675 -4154981 - SAR_DM Satellite Satellite -426 1046 413 1 774 5224 25 2 0 chrUextra 24849775 24850410 -4154246 - R1_DM LINE R1 -360 4996 4361 1 774 3273 84 9 39 chrUextra 24850511 24851044 -4153612 - Gypsy12_I LTR Gypsy -5029 517 1 1 774 509 150 10 10 chrUextra 24851044 24851145 -4153511 - Gypsy12A_LTR LTR Gypsy 0 2280 2180 1 774 621 151 28 141 chrUextra 24851245 24851422 -4153234 + TART LINE telomeric 3206 3362 -11115 1 774 2723 83 18 22 chrUextra 24851429 24851874 -4152782 + TART LINE telomeric 2777 3219 -11258 1 774 2810 160 13 7 chrUextra 24851980 24852577 -4152079 - SAR_DM Satellite Satellite -546 926 326 1 774 2883 177 6 8 chrUextra 24852719 24853350 -4151306 - SAR_DM Satellite Satellite -425 1047 418 1 774 290 276 36 77 chrUextra 24853450 24854011 -4150645 - ROVER-I_DM LTR Gypsy -5539 1045 508 1 774 2844 160 13 13 chrUextra 24854185 24854819 -4149837 - SAR_DM Satellite Satellite -507 965 332 1 774 483 0 0 0 chrUextra 24854920 24854975 -4149681 - BLOOD_LTR LTR Gypsy -344 55 1 1 774 3809 26 143 7 chrUextra 24854975 24855555 -4149101 - BLOOD_I LTR Gypsy 0 6613 5955 1 774 4527 2 0 2 chrUextra 24855658 24856181 -4148475 - LSU-rRNA_Dme rRNA rRNA -1591 2309 1788 1 774 525 0 0 15 chrUextra 24856225 24856290 -4148366 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1725 1 774 2963 157 13 10 chrUextra 24856398 24857022 -4147634 + SAR_DM Satellite Satellite 369 994 -478 1 774 4942 40 2 6 chrUextra 24857125 24857760 -4146896 - IDEFIX_I LTR Gypsy -3336 2292 1661 1 774 1488 47 0 2 chrUextra 24857863 24858485 -4146171 + (CATCT)n Simple_repeat Simple_repeat 1 621 0 1 774 2901 171 8 9 chrUextra 24858597 24859228 -4145428 + SAR_DM Satellite Satellite 293 922 -550 1 774 1365 0 21 16 chrUextra 24859330 24859516 -4145140 + NTS_DM Other Other 54 240 0 1 774 1847 4 17 13 chrUextra 24859516 24859755 -4144901 + NTS_DM Other Other 1 240 0 1 774 1271 6 0 24 chrUextra 24859755 24859921 -4144735 + NTS_DM Other Other 1 162 -78 1 774 5432 2 0 2 chrUextra 24860065 24860700 -4143956 + R1_DM LINE R1 1526 2159 -3197 1 774 5435 3 8 2 chrUextra 24860802 24861435 -4143221 - Gypsy4_I LTR Gypsy -3035 3253 2617 1 774 1147 146 39 96 chrUextra 24861553 24861834 -4142822 + TART LINE telomeric 3098 3362 -11115 1 774 2066 59 15 9 chrUextra 24861841 24862168 -4142488 + TART LINE telomeric 2777 3105 -11372 1 774 819 0 0 0 chrUextra 24862814 24862905 -4141751 + (CACAA)n Simple_repeat Simple_repeat 5 95 0 1 774 5093 5 17 9 chrUextra 24863005 24863640 -4141016 - MDG1_I LTR Gypsy -5656 940 301 1 774 2924 217 34 14 chrUextra 24863740 24865105 -4139551 + SAR_DM Satellite Satellite 1 1391 -501 1 774 2289 61 5 205 chrUextra 24865210 24865845 -4138811 - BATUMI_I LTR Pao -7159 804 297 1 774 1502 201 67 13 chrUextra 24865949 24866370 -4138286 - SAR_DM Satellite Satellite -721 665 38 1 774 1250 80 0 0 chrUextra 24866370 24866557 -4138099 + ARS406_DM Unknown Unknown 1 187 -166 1 774 1502 201 67 13 chrUextra 24866557 24866580 -4138076 - SAR_DM Satellite Satellite -721 37 1 1 774 2572 183 8 21 chrUextra 24867419 24868050 -4136606 + SAR_DM Satellite Satellite 496 1118 -354 1 774 4739 2 3 73 chrUextra 24868151 24868785 -4135871 + LSU-rRNA_Dme rRNA rRNA 1461 2050 -1850 1 774 2702 181 11 8 chrUextra 24868887 24869511 -4135145 + SAR_DM Satellite Satellite 278 903 -569 1 774 5494 0 2 3 chrUextra 24869620 24870255 -4134401 - LSU-rRNA_Dme rRNA rRNA -268 3632 2999 1 774 4087 101 71 6 chrUextra 24870355 24870990 -4133666 - Gypsy12_I LTR Gypsy -3531 2015 1340 1 774 47 0 0 0 chrUextra 24871485 24871532 -4133124 + AT_rich Low_complexity Low_complexity 1 47 0 1 774 4966 41 2 2 chrUextra 24871825 24872460 -4132196 + R1_DM LINE R1 1010 1644 -3712 1 774 4744 38 2 14 chrUextra 24872560 24873195 -4131461 + BATUMI_I LTR Pao 2707 3333 -4630 1 774 2745 179 7 5 chrUextra 24873299 24873905 -4130751 - SAR_DM Satellite Satellite -620 852 246 1 774 362 123 0 0 chrUextra 24873865 24873930 -4130726 + ARS406_DM Unknown Unknown 1 65 -288 1 774 1116 8 0 0 chrUextra 24874030 24874159 -4130497 + LSU-rRNA_Dme rRNA rRNA 2450 2578 -1322 1 774 4330 0 0 0 chrUextra 24874162 24874665 -4129991 + R2_DM LINE R2 382 884 -2723 1 774 399 0 62 47 chrUextra 24874765 24874829 -4129827 + NTS_DM Other Other 176 240 0 1 774 1734 21 17 17 chrUextra 24874829 24875069 -4129587 + NTS_DM Other Other 1 240 0 1 774 1828 8 17 13 chrUextra 24875069 24875308 -4129348 + NTS_DM Other Other 1 240 0 1 774 804 0 0 0 chrUextra 24875308 24875400 -4129256 + NTS_DM Other Other 1 92 -148 1 774 1437 81 3 0 chrUextra 24875517 24875876 -4128780 + (CTATT)n Simple_repeat Simple_repeat 1 360 0 1 774 240 130 0 0 chrUextra 24875907 24875953 -4128703 + (TTATA)n Simple_repeat Simple_repeat 3 48 0 1 774 1118 51 17 22 chrUextra 24875953 24876133 -4128523 + (CTATT)n Simple_repeat Simple_repeat 2 180 0 1 774 1091 116 0 17 chrUextra 24876293 24876527 -4128129 + (CTATT)n Simple_repeat Simple_repeat 1 229 0 1 774 1437 21 0 6 chrUextra 24876529 24876870 -4127786 + (TTCTC)n Simple_repeat Simple_repeat 1 338 0 1 774 402 224 0 30 chrUextra 24876970 24877071 -4127585 + TIRANT_I LTR Gypsy 7595 7692 0 1 774 770 11 0 0 chrUextra 24877514 24877605 -4127051 + Copia2_I LTR Copia 1871 1961 -2201 1 774 2072 91 168 34 chrUextra 24879212 24879599 -4125057 - TAHRE LINE telomeric -12 10451 10013 1 774 1090 105 209 0 chrUextra 24879599 24879809 -4124847 - TART LINE telomeric -6638 7839 7586 1 774 1550 10 19 14 chrUextra 24879910 24880118 -4124538 + NTS_DM Other Other 32 240 0 1 774 1831 8 17 13 chrUextra 24880118 24880357 -4124299 + NTS_DM Other Other 1 240 0 1 774 1290 6 0 18 chrUextra 24880357 24880522 -4124134 + NTS_DM Other Other 1 162 -78 1 774 522 0 0 0 chrUextra 24880645 24880703 -4123953 + (TAGA)n Simple_repeat Simple_repeat 1 58 0 1 774 4066 0 0 0 chrUextra 24881380 24881843 -4122813 + R2_DM LINE R2 3145 3607 0 1 774 651 26 0 0 chrUextra 24881842 24881919 -4122737 + LSU-rRNA_Dme rRNA rRNA 2578 2654 -1246 1 774 572 0 0 0 chrUextra 24881948 24882015 -4122641 + R1_DM LINE R1 1 67 -5289 1 774 2065 0 0 0 chrUextra 24882115 24882349 -4122307 + SSU-rRNA_Dme rRNA rRNA 1762 1995 0 1 774 21 89 0 0 chrUextra 24882368 24882424 -4122232 + AT_rich Low_complexity Low_complexity 1 56 0 1 774 5538 2 0 0 chrUextra 24882852 24883485 -4121171 - LSU-rRNA_Dme rRNA rRNA -1181 2719 2087 1 774 5139 28 0 0 chrUextra 24883585 24884220 -4120436 - R1_DM LINE R1 -2458 2898 2264 1 774 2284 86 19 55 chrUextra 24884320 24884941 -4119715 - DMSAT6 Satellite Satellite -79 598 1 1 774 5472 2 0 0 chrUextra 24885055 24885690 -4118966 - ROO_I LTR Pao -2616 5640 5006 1 774 5441 9 2 0 chrUextra 24885790 24886425 -4118231 + Gypsy6_I LTR Gypsy 2386 3021 -3991 1 774 850 52 0 0 chrUextra 24886525 24886640 -4118016 + ARS406_DM Unknown Unknown 75 189 -164 1 774 2101 184 99 29 chrUextra 24886543 24887160 -4117496 - SAR_DM Satellite Satellite -208 1264 605 1 774 1543 96 4 7 chrUextra 24887271 24887545 -4117111 - S_DM DNA Tc1 -1463 273 1 1 774 1034 15 0 8 chrUextra 24887545 24887672 -4116984 - CIRCE LINE Composite -1861 4495 4370 1 774 1022 100 49 58 chrUextra 24887672 24887895 -4116761 - ROVER-LTR_DM LTR Gypsy 0 367 147 1 774 2251 112 20 28 chrUextra 24887995 24888608 -4116048 - DMSAT6 Satellite Satellite -73 607 1 1 774 433 216 9 0 chrUextra 24888735 24888846 -4115810 - SAR_DM Satellite Satellite -729 743 632 1 774 4387 4 0 0 chrUextra 24888853 24889365 -4115291 + FW_DM LINE Jockey 1 512 -4180 1 774 5001 2 0 0 chrUextra 24889531 24890100 -4114556 + SSU-rRNA_Dme rRNA rRNA 1 569 -1426 1 774 3743 244 17 43 chrUextra 24890941 24892171 -4112485 + SAR_DM Satellite Satellite 1 1197 -203 1 774 541 145 77 0 chrUextra 24892186 24892303 -4112353 + SAR_DM Satellite Satellite 547 672 -800 1 774 5452 2 0 2 chrUextra 24892405 24893040 -4111616 + R1_DM LINE R1 1431 2064 -3292 1 774 5197 24 2 0 chrUextra 24893875 24894510 -4110146 + R1_DM LINE R1 2312 2947 -2409 1 774 5524 5 0 0 chrUextra 24894610 24895245 -4109411 - Gypsy4_I LTR Gypsy -5025 1263 629 1 774 21 89 0 0 chrUextra 24895746 24895802 -4108854 + AT_rich Low_complexity Low_complexity 1 56 0 1 774 1395 0 0 0 chrUextra 24895821 24895980 -4108676 - SSU-rRNA_Dme rRNA rRNA 0 1995 1837 1 774 5198 18 2 14 chrUextra 24896080 24896715 -4107941 - Gypsy12_I LTR Gypsy -400 5146 4520 1 774 2491 95 18 13 chrUextra 24896841 24897450 -4107206 - DMSAT6 Satellite Satellite -4 611 1 1 774 938 216 110 56 chrUextra 24897593 24897985 -4106671 + HETA LINE telomeric 5311 5723 -358 1 774 303 81 113 0 chrUextra 24898009 24898071 -4106585 + TART LINE telomeric 10421 10489 -3988 1 774 34 24 0 0 chrUextra 24898084 24898125 -4106531 + AT_rich Low_complexity Low_complexity 1 41 0 1 774 3941 15 0 4 chrUextra 24898295 24898775 -4105881 - DMRT1B LINE R1 -2803 2380 1903 1 774 678 0 106 0 chrUextra 24898776 24898918 -4105738 + (GTCTG)n Simple_repeat Simple_repeat 1 157 0 1 774 217 262 15 15 chrUextra 24899020 24899086 -4105570 + T-rich Low_complexity Low_complexity 2 67 0 1 774 301 160 49 25 chrUextra 24899089 24899211 -4105445 + CT-rich Low_complexity Low_complexity 4 128 0 1 774 477 142 64 0 chrUextra 24899242 24899383 -4105273 + CT-rich Low_complexity Low_complexity 5 154 0 1 774 540 138 54 8 chrUextra 24899412 24899655 -4105001 + GA-rich Low_complexity Low_complexity 1 254 0 1 774 1234 67 28 16 chrUextra 24900208 24900390 -4104266 + Invader1_I LTR Gypsy 2718 2901 -285 1 774 1566 0 0 0 chrUextra 24900490 24900664 -4103992 + (CACAA)n Simple_repeat Simple_repeat 3 176 0 1 774 34 24 0 0 chrUextra 24901348 24901389 -4103267 + AT_rich Low_complexity Low_complexity 1 41 0 1 774 21 95 0 0 chrUextra 24901602 24901665 -4102991 + AT_rich Low_complexity Low_complexity 1 63 0 1 774 1515 0 0 11 chrUextra 24901677 24901860 -4102796 + LSU-rRNA_Dme rRNA rRNA 1 181 -3719 1 774 1121 21 7 0 chrUextra 24901960 24902101 -4102555 - TRANSIB1 DNA Transib -64 2950 2809 1 774 3906 20 42 0 chrUextra 24902099 24902595 -4102061 - TRANSIB1 DNA Transib -1347 1667 1151 1 774 3563 0 0 12 chrUextra 24902695 24903109 -4101547 + HOBO DNA hAT 2608 3016 0 1 96 5529 2 2 0 chrUextra 24903430 24904065 -4100591 + SSU-rRNA_Dme rRNA rRNA 1335 1970 -25 1 775 551 12 0 0 chrUextra 24904165 24904247 -4100409 + DOC LINE Jockey 4644 4725 0 1 775 375 130 0 0 chrUextra 24904251 24904320 -4100336 - ARS406_DM Unknown Unknown -284 69 1 1 775 2257 197 6 4 chrUextra 24904258 24904798 -4099858 + SAR_DM Satellite Satellite 224 764 -708 1 775 315 43 22 0 chrUextra 24904900 24904946 -4099710 + ARS406_DM Unknown Unknown 140 186 -167 1 775 2658 170 36 7 chrUextra 24904906 24905522 -4099134 - SAR_DM Satellite Satellite -615 857 224 1 775 505 80 0 0 chrUextra 24905460 24905535 -4099121 + ARS406_DM Unknown Unknown 1 75 -278 1 775 1923 28 28 0 chrUextra 24905635 24905884 -4098772 + PROTOP DNA P 831 1086 -3394 1 775 2743 12 0 0 chrUextra 24905895 24906217 -4098439 + PROTOP DNA P 4159 4480 0 1 775 231 0 0 0 chrUextra 24906370 24906397 -4098259 - NTS_DM Other Other -207 33 7 1 775 1850 4 17 13 chrUextra 24906403 24906642 -4098014 - NTS_DM Other Other 0 240 1 1 775 1734 21 17 17 chrUextra 24906642 24906882 -4097774 - NTS_DM Other Other 0 240 1 1 775 692 25 32 41 chrUextra 24906882 24907005 -4097651 - NTS_DM Other Other 0 240 119 1 775 4704 19 5 3 chrUextra 24907105 24907730 -4096926 + MDG1_I LTR Gypsy 5699 6324 -272 1 775 1629 55 37 25 chrUextra 24909702 24909943 -4094713 + BATUMI_LTR LTR Pao 1 244 -28 1 775 1461 12 0 0 chrUextra 24910045 24910212 -4094444 + (GAGAA)n Simple_repeat Simple_repeat 4 170 0 1 775 4624 43 30 2 chrUextra 24911541 24912150 -4092506 + R1_DM LINE R1 1103 1728 -3628 1 775 5082 2 11 3 chrUextra 24912250 24912885 -4091771 + MAX_I LTR Pao 614 1253 -6661 1 775 5311 2 17 3 chrUextra 24912985 24913620 -4091036 - MAX_I LTR Pao -6222 1692 1049 1 775 5363 3 2 0 chrUextra 24913720 24914354 -4090302 + R1_DM LINE R1 2517 3151 -2205 1 775 5181 28 0 0 chrUextra 24914454 24915088 -4089568 + R1_DM LINE R1 2918 3551 -1805 1 775 1302 71 5 5 chrUextra 24915188 24915373 -4089283 - R1_DM LINE R1 -5171 185 1 1 775 954 26 0 0 chrUextra 24915406 24915520 -4089136 - R1_DM LINE R1 0 5356 5243 1 775 1653 19 5 0 chrUextra 24915517 24915722 -4088934 - R1_DM LINE R1 -290 5066 4861 1 775 661 64 11 0 chrUextra 24915724 24915818 -4088838 - R1_DM LINE R1 -5114 242 148 1 775 21 89 0 0 chrUextra 24915999 24916055 -4088601 + AT_rich Low_complexity Low_complexity 1 56 0 1 775 4157 0 4 2 chrUextra 24916074 24916556 -4088100 - SSU-rRNA_Dme rRNA rRNA 0 1995 1513 1 775 2447 89 23 16 chrUextra 24916682 24917289 -4087367 + DMSAT6 Satellite Satellite 1 611 -3 1 775 3311 66 4 4 chrUextra 24917393 24917851 -4086805 - R1_DM LINE R1 -4898 458 1 1 775 883 53 0 9 chrUextra 24917884 24917999 -4086657 - R1_DM LINE R1 0 5356 5243 1 775 933 9 0 0 chrUextra 24918858 24918964 -4085692 + (GAGAA)n Simple_repeat Simple_repeat 2 107 0 1 775 2625 158 60 25 chrUextra 24919627 24920226 -4084430 - HETA LINE telomeric -694 5387 4768 1 775 2977 173 6 6 chrUextra 24920326 24920960 -4083696 - SAR_DM Satellite Satellite -435 1037 404 1 775 5079 11 19 2 chrUextra 24921060 24921694 -4082962 + Invader2_I LTR Gypsy 130 774 -3818 1 775 2734 182 8 8 chrUextra 24922528 24923160 -4081496 - SAR_DM Satellite Satellite -629 843 212 1 775 4589 74 13 13 chrUextra 24923262 24923892 -4080764 + Gypsy12_I LTR Gypsy 4289 4918 -628 1 775 4910 38 2 11 chrUextra 24923996 24924630 -4080026 - BATUMI_I LTR Pao -2526 5437 4810 1 775 775 103 0 0 chrUextra 24924730 24924856 -4079800 - ARS406_DM Unknown Unknown -227 126 1 1 775 2552 186 10 10 chrUextra 24924760 24925364 -4079292 + SAR_DM Satellite Satellite 192 795 -677 1 775 2740 177 13 8 chrUextra 24926201 24926832 -4077824 - SAR_DM Satellite Satellite -615 857 224 1 775 717 105 9 0 chrUextra 24926934 24927048 -4077608 + ARS406_DM Unknown Unknown 73 187 -166 1 775 2903 245 15 36 chrUextra 24926954 24928241 -4076415 - SAR_DM Satellite Satellite -208 1260 1 1 775 250 100 0 0 chrUextra 24928260 24928300 -4076356 + ARS406_DM Unknown Unknown 75 114 -239 1 775 1133 31 56 0 chrUextra 24928400 24928561 -4076095 + Invader3_I LTR Gypsy 4718 4887 -1 1 775 1750 38 38 4 chrUextra 24928584 24928821 -4075835 + Invader3_LTR LTR Gypsy 54 298 0 1 775 2663 181 15 5 chrUextra 24929154 24929755 -4074901 - SAR_DM Satellite Satellite -642 830 224 1 775 427 133 0 0 chrUextra 24929693 24929768 -4074888 + ARS406_DM Unknown Unknown 1 75 -278 1 775 4044 43 99 0 chrUextra 24929879 24930463 -4074193 + DOC2_DM LINE Jockey 261 902 -3891 1 775 1816 176 8 6 chrUextra 24930602 24931236 -4073420 + SAR_DM Satellite Satellite 1 634 -542 1 775 5302 6 2 2 chrUextra 24931336 24931970 -4072686 + DMRT1B LINE R1 3849 4482 -701 1 775 2150 211 46 11 chrUextra 24932076 24932704 -4071952 - SAR_DM Satellite Satellite -416 1056 407 1 775 5520 2 2 0 chrUextra 24932804 24933438 -4071218 + SSU-rRNA_Dme rRNA rRNA 1325 1959 -36 1 775 1886 9 0 0 chrUextra 24933538 24933771 -4070885 + BARI_DM DNA Tc1 1257 1489 -239 1 775 3570 0 0 0 chrUextra 24933759 24934172 -4070484 + BARI_DM DNA Tc1 94 506 -1222 1 775 767 0 0 0 chrUextra 24934272 24934367 -4070289 + PROTOP_A DNA P 372 466 -639 1 775 4415 19 0 2 chrUextra 24934367 24934906 -4069750 - PROTOP DNA P 0 4480 3943 1 775 4757 2 5 7 chrUextra 24935006 24935578 -4069078 + LSU-rRNA_Dme rRNA rRNA 1218 1788 -2112 1 775 3420 52 8 2 chrUextra 24935742 24936243 -4068413 + MDG1_I LTR Gypsy 5794 6297 -299 1 775 278 148 30 69 chrUextra 24936243 24936374 -4068282 + MDG1_I LTR Gypsy 6440 6565 -31 1 775 3918 23 0 0 chrUextra 24936474 24936947 -4067709 + R1_DM LINE R1 4884 5356 0 1 775 861 86 8 0 chrUextra 24936980 24937108 -4067548 + R1_DM LINE R1 1 129 -5227 1 775 2392 192 19 7 chrUextra 24937228 24937842 -4066814 + SAR_DM Satellite Satellite 326 947 -525 1 775 1301 6 0 18 chrUextra 24938007 24938172 -4066484 - NTS_DM Other Other -78 162 1 1 775 1829 8 17 13 chrUextra 24938172 24938411 -4066245 - NTS_DM Other Other 0 240 1 1 775 1148 6 24 18 chrUextra 24938411 24938576 -4066080 - NTS_DM Other Other 0 240 75 1 775 40 21 0 0 chrUextra 24938703 24938750 -4065906 + AT_rich Low_complexity Low_complexity 1 47 0 1 775 2759 180 11 9 chrUextra 24939410 24940044 -4064612 + SAR_DM Satellite Satellite 410 1044 -428 1 775 1241 24 0 6 chrUextra 24940144 24940309 -4064347 - NTS_DM Other Other -39 201 38 1 775 870 9 0 27 chrUextra 24940309 24940421 -4064235 - NTS_DM Other Other -107 133 25 1 775 22 56 0 0 chrUextra 24940447 24940483 -4064173 + AT_rich Low_complexity Low_complexity 1 36 0 1 775 255 125 0 0 chrUextra 24940496 24940536 -4064120 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 775 246 150 0 0 chrUextra 24940579 24940619 -4064037 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 775 246 150 0 0 chrUextra 24940671 24940711 -4063945 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 775 3338 141 49 3 chrUextra 24940878 24941511 -4063145 + IDEFIX_I LTR Gypsy 3144 3805 -1823 1 775 2716 173 11 11 chrUextra 24941612 24942242 -4062414 + SAR_DM Satellite Satellite 447 1076 -396 1 775 4272 107 8 0 chrUextra 24942346 24942980 -4061676 + Gypsy12_I LTR Gypsy 3614 4252 -1294 1 775 339 224 106 0 chrUextra 24943081 24943242 -4061414 + (CAAGA)n Simple_repeat Simple_repeat 3 180 0 1 775 333 208 107 0 chrUextra 24943204 24943363 -4061293 + (AATAG)n Simple_repeat Simple_repeat 5 180 0 1 775 2792 155 29 21 chrUextra 24943814 24944394 -4060262 + TAHRE LINE telomeric 9868 10452 -11 1 775 363 74 0 18 chrUextra 24944393 24944448 -4060208 + HETA LINE telomeric 190 243 -5838 1 775 2888 166 9 11 chrUextra 24944553 24945182 -4059474 - SAR_DM Satellite Satellite -425 1047 420 1 775 1029 32 0 0 chrUextra 24945282 24945407 -4059249 + (TATAA)n Simple_repeat Simple_repeat 1 125 0 1 775 3693 0 0 2 chrUextra 24945407 24945831 -4058825 - ROO_LTR LTR Pao -5 423 1 1 775 698 0 12 0 chrUextra 24945831 24945916 -4058740 - ROO_I LTR Pao 0 8256 8171 1 775 624 39 0 19 chrUextra 24946016 24946120 -4058536 + NTS_DM Other Other 100 201 -39 1 775 815 37 0 27 chrUextra 24946173 24946285 -4058371 + NTS_DM Other Other 25 133 -107 1 775 1252 18 0 6 chrUextra 24946285 24946450 -4058206 + NTS_DM Other Other 38 201 -39 1 775 870 9 0 27 chrUextra 24946502 24946614 -4058042 + NTS_DM Other Other 25 133 -107 1 775 318 0 0 0 chrUextra 24946614 24946650 -4058006 + NTS_DM Other Other 38 73 -167 1 775 5542 2 0 0 chrUextra 24946750 24947384 -4057272 - LSU-rRNA_Dme rRNA rRNA -1053 2847 2214 1 775 1411 22 0 6 chrUextra 24947484 24947666 -4056990 - NTS_DM Other Other -59 181 1 1 775 1762 17 17 17 chrUextra 24947666 24947906 -4056750 - NTS_DM Other Other 0 240 1 1 775 1444 34 19 19 chrUextra 24947906 24948118 -4056538 - NTS_DM Other Other 0 240 29 1 775 5256 10 0 9 chrUextra 24948218 24948852 -4055804 + FW_DM LINE Jockey 1720 2347 -2345 1 775 1257 52 6 4 chrUextra 24948952 24949141 -4055515 + TART LINE telomeric 10293 10663 -3814 1 775 751 162 151 26 chrUextra 24949131 24949161 -4055495 + HETA LINE telomeric 275 306 -5775 1 775 220 27 54 0 chrUextra 24949161 24949198 -4055458 + (TAAAA)n Simple_repeat Simple_repeat 1 39 0 1 775 1009 158 41 79 chrUextra 24949198 24949581 -4055075 + HETA LINE telomeric 19 615 -5466 1 775 2586 170 55 14 chrUextra 24949686 24950320 -4054336 + SAR_DM Satellite Satellite 346 1005 -467 1 775 870 9 0 27 chrUextra 24950423 24950535 -4054121 - NTS_DM Other Other -107 133 25 1 775 22 56 0 0 chrUextra 24950561 24950597 -4054059 + AT_rich Low_complexity Low_complexity 1 36 0 1 775 225 125 0 24 chrUextra 24950610 24950651 -4054005 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 775 246 150 0 0 chrUextra 24950694 24950734 -4053922 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 775 246 150 0 0 chrUextra 24950786 24950826 -4053830 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 775 246 150 0 0 chrUextra 24950878 24950918 -4053738 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 775 22 56 0 0 chrUextra 24950923 24950959 -4053697 + AT_rich Low_complexity Low_complexity 1 36 0 1 775 1882 167 76 25 chrUextra 24951157 24951786 -4052870 - SAR_DM Satellite Satellite -658 660 1 1 775 5406 2 0 0 chrUextra 24951888 24952522 -4052134 - ROO_I LTR Pao -2800 5456 4823 1 775 5322 5 0 0 chrUextra 24952639 24953253 -4051403 - STALKER4_I LTR Gypsy -2112 4418 3805 1 775 5384 14 0 0 chrUextra 24953356 24953990 -4050666 - DMRT1A LINE R1 -1098 4085 3452 1 775 4988 24 3 16 chrUextra 24954090 24954724 -4049932 + BATUMI_I LTR Pao 1166 1791 -6172 1 775 5154 13 0 2 chrUextra 24954824 24955441 -4049215 + R1_DM LINE R1 4741 5356 0 1 775 1422 172 19 8 chrUextra 24955558 24956191 -4048465 + SAR_DM Satellite Satellite 1 640 -569 1 775 5064 20 19 0 chrUextra 24956292 24956926 -4047730 + R1_DM LINE R1 134 779 -4577 1 775 2166 127 46 15 chrUextra 24957050 24957660 -4046996 - DMSAT6 Satellite Satellite 0 628 1 1 775 375 0 0 0 chrUextra 24957760 24957803 -4046853 - NTS_DM Other Other -197 43 1 1 775 1831 0 17 17 chrUextra 24957803 24958043 -4046613 - NTS_DM Other Other 0 240 1 1 775 1843 4 17 13 chrUextra 24958043 24958282 -4046374 - NTS_DM Other Other 0 240 1 1 775 748 0 36 27 chrUextra 24958282 24958394 -4046262 - NTS_DM Other Other 0 240 128 1 775 4389 9 55 0 chrUextra 24958494 24959128 -4045528 + STALKER4_I LTR Gypsy 1274 1942 -4588 1 775 3156 0 3 3 chrUextra 24959228 24959593 -4045063 + SSU-rRNA_Dme rRNA rRNA 1631 1995 0 1 775 21 89 0 0 chrUextra 24959612 24959668 -4044988 + AT_rich Low_complexity Low_complexity 1 56 0 1 775 2806 169 13 14 chrUextra 24959962 24960593 -4044063 + SAR_DM Satellite Satellite 241 870 -602 1 775 5395 2 2 5 chrUextra 24960696 24961330 -4043326 + SSU-rRNA_Dme rRNA rRNA 828 1459 -536 1 775 3434 7 238 0 chrUextra 24961430 24961980 -4042676 + MDG1_I LTR Gypsy 5929 6799 -98 1 775 423 100 0 0 chrUextra 24961984 24962054 -4042602 + (TAA)n Simple_repeat Simple_repeat 3 72 0 1 775 2672 0 6 3 chrUextra 24962164 24962483 -4042173 + LSU-rRNA_Dme rRNA rRNA 1469 1788 -2112 1 775 2342 0 0 4 chrUextra 24962527 24962798 -4041858 + LSU-rRNA_Dme rRNA rRNA 1788 2057 -1843 1 775 2800 172 11 9 chrUextra 24962898 24963532 -4041124 + SAR_DM Satellite Satellite 347 981 -491 1 775 5434 0 3 5 chrUextra 24963632 24964266 -4040390 - LSU-rRNA_Dme rRNA rRNA -864 3036 2404 1 775 5268 17 3 0 chrUextra 24964366 24965000 -4039656 + R1_DM LINE R1 4361 4996 -360 1 775 1576 180 44 6 chrUextra 24965100 24965463 -4039193 - HETA LINE telomeric -1214 4867 4491 1 775 860 149 59 43 chrUextra 24965481 24965734 -4038922 - TART LINE telomeric -4887 9590 9334 1 775 2405 80 22 69 chrUextra 24965834 24966468 -4038188 + DMSAT6 Satellite Satellite 1 604 -97 1 775 389 21 0 0 chrUextra 24966569 24966616 -4038040 + FW_DM LINE Jockey 2781 2827 -1865 1 775 396 20 0 0 chrUextra 24966615 24966664 -4037992 + FW_DM LINE Jockey 2992 3040 -1652 1 775 955 9 0 0 chrUextra 24966660 24966772 -4037884 + FW_DM LINE Jockey 3226 3337 -1355 1 775 3500 25 0 0 chrUextra 24966770 24967202 -4037454 + FW_DM LINE Jockey 142 573 -4119 1 775 3210 53 25 35 chrUextra 24967302 24967936 -4036720 - DM176_I LTR Gypsy -5533 887 221 1 775 2483 196 7 7 chrUextra 24968036 24968643 -4036013 + SAR_DM Satellite Satellite 469 1075 -397 1 775 5426 2 0 0 chrUextra 24968770 24969404 -4035252 + LSU-rRNA_Dme rRNA rRNA 498 1131 -2769 1 775 2983 161 11 9 chrUextra 24970238 24970872 -4033784 - SAR_DM Satellite Satellite -436 1036 402 1 775 3898 48 2 2 chrUextra 24970972 24971473 -4033183 - Baggins1 LINE LOA -162 5291 4791 1 775 5109 16 2 8 chrUextra 24971706 24972340 -4032316 + R1_DM LINE R1 3250 3879 -1477 1 775 2911 172 8 6 chrUextra 24973174 24973807 -4030849 - SAR_DM Satellite Satellite -487 985 352 1 775 34 24 0 0 chrUextra 24974098 24974139 -4030517 + AT_rich Low_complexity Low_complexity 1 41 0 1 775 5351 11 0 0 chrUextra 24974642 24975276 -4029380 - FW_DM LINE Jockey -104 4588 3955 1 775 1369 0 0 6 chrUextra 24975376 24975538 -4029118 - LSU-rRNA_Dme rRNA rRNA -3739 161 1 1 775 21 95 0 0 chrUextra 24975550 24975613 -4029043 + AT_rich Low_complexity Low_complexity 1 63 0 1 775 34 24 0 0 chrUextra 24975826 24975867 -4028789 + AT_rich Low_complexity Low_complexity 1 41 0 1 775 3835 38 68 0 chrUextra 24976139 24976737 -4027919 + DMCR1A LINE CR1 1722 2360 -2110 1 775 1469 121 57 3 chrUextra 24977104 24977386 -4027270 - DNAREP1_DM LINE Penelope -297 297 1 1 775 300 118 108 81 chrUextra 24978312 24978386 -4026270 - Gypsy12_LTR LTR Gypsy -2260 76 1 1 775 3936 71 86 2 chrUextra 24978385 24978946 -4025710 - Gypsy12_I LTR Gypsy 0 5546 4939 1 775 2344 206 40 5 chrUextra 24979046 24979669 -4024987 + SAR_DM Satellite Satellite 412 1056 -416 1 775 51 31 0 0 chrUextra 24980883 24980948 -4023708 + AT_rich Low_complexity Low_complexity 1 65 0 1 775 5538 2 0 2 chrUextra 24981248 24981882 -4022774 + SSU-rRNA_Dme rRNA rRNA 105 737 -1258 1 775 5326 14 0 0 chrUextra 24981982 24982616 -4022040 + FW_DM LINE Jockey 506 1139 -3553 1 775 1389 39 0 3 chrUextra 24982716 24983109 -4021547 + (AATAG)n Simple_repeat Simple_repeat 1 391 0 1 775 1488 18 0 0 chrUextra 24983120 24983350 -4021306 + (AATAG)n Simple_repeat Simple_repeat 1 230 0 1 775 5298 13 2 0 chrUextra 24983450 24984084 -4020572 + Invader2_I LTR Gypsy 937 1571 -3021 1 775 527 49 25 0 chrUextra 24984184 24984265 -4020391 - Copia2_I LTR Copia -1693 2469 2387 1 775 4817 9 0 0 chrUextra 24984259 24984818 -4019838 - Copia2_I LTR Copia -1902 2260 1702 1 775 1620 0 0 0 chrUextra 24985145 24985552 -4019104 + (TTCTC)n Simple_repeat Simple_repeat 1 407 0 1 775 3546 27 5 0 chrUextra 24986386 24986828 -4017828 + R1_DM LINE R1 4623 5066 -290 1 775 897 53 0 0 chrUextra 24986825 24986939 -4017717 + R1_DM LINE R1 5243 5356 0 1 775 342 83 0 0 chrUextra 24986972 24987020 -4017636 + R1_DM LINE R1 1 48 -5308 1 775 4855 20 109 0 chrUextra 24987121 24987754 -4016902 - R1_DM LINE R1 -2133 3223 2522 1 775 5016 28 41 2 chrUextra 24987854 24988488 -4016168 + R1_DM LINE R1 4089 4747 -609 1 775 2864 171 11 6 chrUextra 24988588 24989219 -4015437 - SAR_DM Satellite Satellite -487 985 352 1 775 2887 163 11 9 chrUextra 24989322 24989955 -4014701 + SAR_DM Satellite Satellite 346 979 -493 1 775 396 0 0 0 chrUextra 24990056 24990100 -4014556 + (TCTA)n Simple_repeat Simple_repeat 3 46 0 1 775 4010 95 8 5 chrUextra 24990790 24991423 -4013233 + S_DM DNA Tc1 1024 1658 -78 1 775 5449 2 0 0 chrUextra 24991524 24992157 -4012499 - DOC LINE Jockey -1680 3045 2413 1 775 2247 183 58 15 chrUextra 24992257 24992861 -4011795 - SAR_DM Satellite Satellite -663 809 180 1 775 877 82 0 0 chrUextra 24992755 24992890 -4011766 + ARS406_DM Unknown Unknown 1 135 -218 1 775 2432 142 27 111 chrUextra 24992991 24993623 -4011033 - Gypsy12A_LTR LTR Gypsy -40 2240 1662 1 775 5009 16 2 6 chrUextra 24993723 24994355 -4010301 + IDEFIX_I LTR Gypsy 2739 3367 -2261 1 775 648 36 0 0 chrUextra 24994456 24994539 -4010117 + (TTCTC)n Simple_repeat Simple_repeat 4 86 0 1 775 2528 0 10 0 chrUextra 24995189 24995489 -4009167 - R1_DM LINE R1 -5053 303 1 1 775 2647 3 0 0 chrUextra 24995519 24995822 -4008834 - LSU-rRNA_Dme rRNA rRNA -1246 2654 2352 1 775 5386 3 0 0 chrUextra 24995922 24996555 -4008101 - ROO_I LTR Pao -928 7328 6696 1 775 3111 16 0 0 chrUextra 24996919 24997288 -4007368 + PROTOP_A DNA P 1 369 -736 1 775 456 71 200 12 chrUextra 24997388 24997470 -4007186 - BATUMI_I LTR Pao -864 7099 7002 1 775 3970 64 0 6 chrUextra 24997470 24998019 -4006637 - BATUMI_I LTR Pao 0 7963 7418 1 775 429 168 1 1 chrUextra 24998126 24998232 -4006424 - TART LINE telomeric -5435 9042 8952 1 775 591 298 39 28 chrUextra 24998979 24999471 -4005185 + Gypsy5_I LTR Gypsy 3946 4388 -2121 1 775 3602 0 0 0 chrUextra 24999587 25000000 -4004656 + LSU-rRNA_Dme rRNA rRNA 2592 3004 -896 1 775 1912 5 0 0 chrUextra 25000000 25000220 -4004436 + LSU-rRNA_Dme rRNA rRNA 3005 3224 -676 1 775 2423 193 13 10 chrUextra 25000347 25000953 -4003703 - SAR_DM Satellite Satellite -396 1076 469 1 775 1620 0 0 0 chrUextra 25001053 25001325 -4003331 + (GAGAA)n Simple_repeat Simple_repeat 1 272 0 1 775 2682 179 11 10 chrUextra 25001786 25002407 -4002249 - SAR_DM Satellite Satellite -627 845 224 1 775 470 81 14 0 chrUextra 25002345 25002419 -4002237 + ARS406_DM Unknown Unknown 1 75 -278 1 775 4796 13 9 0 chrUextra 25002519 25003152 -4001504 + STALKER4_I LTR Gypsy 5846 6484 -46 1 775 2904 166 11 9 chrUextra 25003252 25003884 -4000772 - SAR_DM Satellite Satellite -488 984 352 1 775 4722 33 0 0 chrUextra 25003985 25004567 -4000089 - R1_DM LINE R1 -3398 1958 1377 1 775 348 23 0 0 chrUextra 25004575 25004618 -4000038 + FW_DM LINE Jockey 1 43 -4649 1 775 1241 7 0 7 chrUextra 25004718 25004865 -3999791 + (GAGAA)n Simple_repeat Simple_repeat 2 147 0 1 775 735 147 0 0 chrUextra 25004923 25005100 -3999556 + (CACCAT)n Simple_repeat Simple_repeat 4 180 0 1 775 208 0 0 160 chrUextra 25005143 25005324 -3999332 + (CATTC)n Simple_repeat Simple_repeat 4 155 0 1 775 21 89 0 0 chrUextra 25005767 25005823 -3998833 + AT_rich Low_complexity Low_complexity 1 56 0 1 775 2041 0 0 8 chrUextra 25005842 25006082 -3998574 - SSU-rRNA_Dme rRNA rRNA 0 1995 1758 1 775 1126 277 65 27 chrUextra 25006923 25007475 -3997181 - G6_DM LINE Jockey -1227 815 243 1 775 2599 185 8 8 chrUextra 25007650 25008265 -3996391 + SAR_DM Satellite Satellite 462 1076 -396 1 775 5070 9 81 0 chrUextra 25008383 25009016 -3995640 - DMRT1B LINE R1 -492 4691 4008 1 775 2668 47 9 13 chrUextra 25009116 25009749 -3994907 - DOC2_DM LINE Jockey -3760 1033 352 1 775 2461 76 16 36 chrUextra 25009851 25010482 -3994174 - DMSAT6 Satellite Satellite -92 618 1 1 775 2075 183 6 13 chrUextra 25010582 25011057 -3993599 + SAR_DM Satellite Satellite 443 914 -558 1 775 968 108 0 0 chrUextra 25011054 25011212 -3993444 - ARS406_DM Unknown Unknown -195 158 1 1 775 364 0 0 0 chrUextra 25011315 25011358 -3993298 + R1_DM LINE R1 5314 5356 0 1 775 5165 3 0 0 chrUextra 25011356 25011948 -3992708 + LSU-rRNA_Dme rRNA rRNA 2640 3231 -669 1 775 5488 0 3 0 chrUextra 25012052 25012681 -3991975 - LSU-rRNA_Dme rRNA rRNA -238 3662 3032 1 775 1326 23 0 11 chrUextra 25012781 25012957 -3991699 - NTS_DM Other Other -66 174 1 1 775 1734 21 17 17 chrUextra 25012957 25013197 -3991459 - NTS_DM Other Other 0 240 1 1 775 626 20 38 38 chrUextra 25013197 25013302 -3991354 - NTS_DM Other Other 0 240 136 1 775 3872 46 107 6 chrUextra 25013514 25014147 -3990509 - PROTOP DNA P -3625 855 159 1 775 2036 133 11 11 chrUextra 25014247 25014880 -3989776 - DMSAT6 Satellite Satellite -87 633 1 1 775 920 84 9 23 chrUextra 25014981 25015613 -3989043 - RSP Satellite Satellite -34 623 1 1 775 4446 25 95 0 chrUextra 25015713 25016346 -3988310 - R1_DM LINE R1 -363 4993 4301 1 775 2669 157 16 42 chrUextra 25016446 25017066 -3987590 - SAR_DM Satellite Satellite -543 929 326 1 775 542 0 0 0 chrUextra 25017179 25017251 -3987405 + TABOR_I LTR Gypsy 6265 6336 0 1 775 4418 2 0 0 chrUextra 25017249 25017755 -3986901 + TABOR_LTR LTR Gypsy 1 506 0 1 775 513 0 0 0 chrUextra 25017755 25017812 -3986844 + (CAAGA)n Simple_repeat Simple_repeat 5 61 0 1 775 1024 22 117 0 chrUextra 25017915 25018052 -3986604 + PROTOP_B DNA P 3 155 -998 1 775 3533 78 4 16 chrUextra 25018050 25018545 -3986111 + Gypsy12_I LTR Gypsy 4657 5145 -401 1 775 4079 38 2 51 chrUextra 25018645 25019278 -3985378 - DM176_I LTR Gypsy -5623 797 196 1 775 908 60 3 17 chrUextra 25019379 25020005 -3984651 + RSP Satellite Satellite 1 617 0 1 775 1073 69 0 0 chrUextra 25020111 25020255 -3984401 + R1_DM LINE R1 1650 1793 -3563 1 775 2316 128 0 98 chrUextra 25020256 25020725 -3983931 + R1_DM LINE R1 310 732 -4624 1 775 2728 177 8 16 chrUextra 25020846 25021477 -3983179 - SAR_DM Satellite Satellite -549 923 298 1 775 1032 25 25 25 chrUextra 25021578 25021741 -3982915 + NTS_DM Other Other 78 240 0 1 775 1756 17 17 17 chrUextra 25021741 25021981 -3982675 + NTS_DM Other Other 1 240 0 1 775 1720 13 22 13 chrUextra 25021981 25022210 -3982446 + NTS_DM Other Other 1 231 -9 1 775 1689 5 14 5 chrUextra 25022310 25022523 -3982133 - NTS_DM Other Other -25 215 1 1 775 1861 0 17 13 chrUextra 25022523 25022762 -3981894 - NTS_DM Other Other 0 240 1 1 775 1280 6 22 17 chrUextra 25022762 25022943 -3981713 - NTS_DM Other Other 0 240 59 1 775 826 52 0 29 chrUextra 25023538 25023676 -3980980 + DMSAT6 Satellite Satellite 254 387 -83 1 775 29 0 0 0 chrUextra 25023870 25023899 -3980757 + AT_rich Low_complexity Low_complexity 1 29 0 1 775 21 0 0 0 chrUextra 25023920 25023941 -3980715 + AT_rich Low_complexity Low_complexity 1 21 0 1 775 37 23 0 0 chrUextra 25024032 25024076 -3980580 + AT_rich Low_complexity Low_complexity 1 44 0 1 775 21 0 0 0 chrUextra 25024097 25024118 -3980538 + AT_rich Low_complexity Low_complexity 1 21 0 1 775 4226 31 65 2 chrUextra 25024509 25025142 -3979514 - R1_DM LINE R1 -1790 3566 2894 1 775 780 21 0 0 chrUextra 25025242 25025336 -3979320 + (CAATA)n Simple_repeat Simple_repeat 3 96 0 1 775 2640 184 28 6 chrUextra 25025975 25026608 -3978048 + SAR_DM Satellite Satellite 357 1003 -469 1 775 2950 157 9 13 chrUextra 25026708 25027341 -3977315 - SAR_DM Satellite Satellite -436 1036 406 1 775 865 91 8 8 chrUextra 25027441 25027574 -3977082 + DNAREP1_DM LINE Penelope 245 377 -217 1 775 263 171 289 0 chrUextra 25027572 25027648 -3977008 + DM176_I LTR Gypsy 4527 4624 -1796 1 775 1387 130 3 99 chrUextra 25027747 25028071 -3976585 + Gypsy8_LTR LTR Gypsy 1 293 -11 1 775 951 80 8 17 chrUextra 25028176 25028800 -3975856 - RSP Satellite Satellite -54 618 1 1 775 2590 173 16 13 chrUextra 25029653 25030263 -3974393 + SAR_DM Satellite Satellite 326 937 -535 1 775 1578 11 0 0 chrUextra 25030384 25030564 -3974092 + (CAATA)n Simple_repeat Simple_repeat 1 180 0 1 775 1900 35 3 90 chrUextra 25030579 25030889 -3973767 + BATUMI_I LTR Pao 7002 7284 -679 1 775 792 70 0 17 chrUextra 25030889 25031005 -3973651 + BATUMI_I LTR Pao 1 114 -7849 1 775 3127 101 51 30 chrUextra 25031106 25031731 -3972925 - STALKER4_I LTR Gypsy -5215 1315 678 1 775 2873 168 11 8 chrUextra 25031839 25032469 -3972187 + SAR_DM Satellite Satellite 406 1037 -435 1 775 308 312 35 52 chrUextra 25032748 25033146 -3971510 - BURDOCK_I LTR Gypsy -4643 1492 850 1 775 2252 177 16 5 chrUextra 25033305 25033937 -3970719 - SAR_DM Satellite Satellite -673 639 1 1 775 22 0 0 0 chrUextra 25034303 25034325 -3970331 + AT_rich Low_complexity Low_complexity 1 22 0 1 775 269 246 0 0 chrUextra 25034584 25034653 -3970003 + BS2 LINE Jockey 4146 4214 -507 1 776 2212 96 25 38 chrUextra 25034773 25035404 -3969252 - DMSAT6 Satellite Satellite -64 622 1 1 776 34 24 0 0 chrUextra 25036744 25036785 -3967871 + AT_rich Low_complexity Low_complexity 1 41 0 1 776 5456 2 0 2 chrUextra 25036970 25037603 -3967053 - DOC LINE Jockey -954 3771 3140 1 776 4588 55 5 10 chrUextra 25037703 25038329 -3966327 - R1_DM LINE R1 -4663 693 71 1 776 4942 33 8 5 chrUextra 25038436 25039069 -3965587 + CIRCE LINE Composite 3167 3801 -2555 1 776 255 31 0 0 chrUextra 25039169 25039201 -3965455 + (TCTTG)n Simple_repeat Simple_repeat 3 34 0 1 776 5092 32 2 2 chrUextra 25039903 25040535 -3964121 + DOC3_DM LINE Jockey 2274 2905 -1835 1 776 5354 6 11 0 chrUextra 25040635 25041268 -3963388 + R1_DM LINE R1 1584 2223 -3133 1 776 899 58 0 0 chrUextra 25041368 25041488 -3963168 + IDEFIX_I LTR Gypsy 2292 2411 -3217 1 776 768 193 37 19 chrUextra 25041503 25041719 -3962937 - T412LTR LTR LTR -17 464 245 1 776 1043 124 226 34 chrUextra 25042500 25042734 -3961922 + DMRT1B LINE R1 4815 5093 -90 1 776 5101 18 2 6 chrUextra 25042845 25043467 -3961189 + FW_DM LINE Jockey 3600 4218 -474 1 776 2713 178 29 8 chrUextra 25044304 25044932 -3959724 - SAR_DM Satellite Satellite -620 852 212 1 776 22 35 0 0 chrUextra 25045033 25045062 -3959594 + AT_rich Low_complexity Low_complexity 1 29 0 1 776 21 95 0 0 chrUextra 25045275 25045338 -3959318 + AT_rich Low_complexity Low_complexity 1 63 0 1 776 2321 0 0 82 chrUextra 25045350 25045666 -3958990 + LSU-rRNA_Dme rRNA rRNA 1 290 -3610 1 776 5355 2 6 0 chrUextra 25045766 25046399 -3958257 - DMRT1A LINE R1 -3611 1572 936 1 776 28 48 0 0 chrUextra 25046778 25046820 -3957836 + AT_rich Low_complexity Low_complexity 1 42 0 1 776 5446 0 0 2 chrUextra 25047232 25047865 -3956791 + BS LINE Jockey 642 1273 -3853 1 776 738 0 0 0 chrUextra 25047965 25048047 -3956609 + (CTTAT)n Simple_repeat Simple_repeat 2 83 0 1 776 21 0 0 0 chrUextra 25049259 25049280 -3955376 + AT_rich Low_complexity Low_complexity 1 21 0 1 776 5082 14 2 3 chrUextra 25049431 25050064 -3954592 + DMRT1B LINE R1 519 1150 -4033 1 776 540 168 17 0 chrUextra 25050164 25050283 -3954373 - ARS406_DM Unknown Unknown -232 121 1 1 776 2539 177 16 21 chrUextra 25050181 25050797 -3953859 + SAR_DM Satellite Satellite 185 797 -675 1 776 1063 57 6 59 chrUextra 25050898 25051067 -3953589 + Gypsy6A_LTR LTR Gypsy 191 350 -70 1 776 1446 100 29 0 chrUextra 25051066 25051307 -3953349 - STALKER4_I LTR Gypsy -3666 2864 2617 1 776 280 28 0 0 chrUextra 25051309 25051345 -3953311 - STALKER4_I LTR Gypsy -4180 2350 2315 1 776 876 67 0 8 chrUextra 25051354 25051475 -3953181 - STALKER4_I LTR Gypsy -4336 2194 2075 1 776 1260 6 0 24 chrUextra 25051676 25051842 -3952814 - NTS_DM Other Other -78 162 1 1 776 1861 0 17 13 chrUextra 25051842 25052081 -3952575 - NTS_DM Other Other 0 240 1 1 776 1300 6 22 16 chrUextra 25052081 25052263 -3952393 - NTS_DM Other Other 0 240 58 1 776 1882 194 14 14 chrUextra 25053099 25053590 -3951066 + SAR_DM Satellite Satellite 586 1076 -396 1 776 585 146 73 8 chrUextra 25053605 25053729 -3950927 + SAR_DM Satellite Satellite 906 1037 -435 1 776 387 0 0 0 chrUextra 25053829 25053878 -3950778 - HMSBEAGLE_I LTR Gypsy -6480 49 1 1 776 2316 8 0 0 chrUextra 25053877 25054143 -3950513 - DMLTR5 LTR Gypsy 0 266 1 1 776 657 119 0 0 chrUextra 25054143 25054244 -3950412 + (TATG)n Simple_repeat Simple_repeat 2 102 0 1 776 1158 122 0 0 chrUextra 25054243 25054423 -3950233 + (TA)n Simple_repeat Simple_repeat 1 180 0 1 776 1885 46 32 41 chrUextra 25054566 25054906 -3949750 + BATUMI_I LTR Pao 603 922 -7041 1 776 2260 35 0 10 chrUextra 25054906 25055195 -3949461 + BATUMI_I LTR Pao 1630 1915 -6048 1 776 930 66 7 20 chrUextra 25055350 25055928 -3948728 - RSP Satellite Satellite 0 570 1 1 776 5051 40 2 0 chrUextra 25056028 25056659 -3947997 + DMCR1A LINE CR1 438 1069 -3401 1 776 2571 185 7 8 chrUextra 25056761 25057366 -3947290 + SAR_DM Satellite Satellite 473 1076 -396 1 776 1222 18 0 12 chrUextra 25057515 25057681 -3946975 - NTS_DM Other Other -39 201 38 1 776 870 9 0 27 chrUextra 25057681 25057793 -3946863 - NTS_DM Other Other -107 133 25 1 776 1252 18 0 6 chrUextra 25057845 25058010 -3946646 - NTS_DM Other Other -39 201 38 1 776 848 18 0 27 chrUextra 25058010 25058122 -3946534 - NTS_DM Other Other -107 133 25 1 776 4502 35 33 3 chrUextra 25058227 25058860 -3945796 - PROTOP DNA P -3506 974 323 1 776 1274 0 0 0 chrUextra 25059446 25059593 -3945063 - ROO_LTR LTR Pao 0 428 282 1 776 1893 104 30 23 chrUextra 25059921 25060315 -3944341 + DMSAT6 Satellite Satellite 17 413 -57 1 776 1723 25 17 17 chrUextra 25060450 25060690 -3943966 - NTS_DM Other Other 0 240 1 1 776 1737 21 17 17 chrUextra 25060690 25060930 -3943726 - NTS_DM Other Other 0 240 1 1 776 777 24 31 31 chrUextra 25060930 25061059 -3943597 - NTS_DM Other Other 0 240 112 1 776 410 21 0 0 chrUextra 25061159 25061207 -3943449 + DM176_I LTR Gypsy 6373 6420 0 1 776 2198 11 0 78 chrUextra 25061207 25061514 -3943142 + DM176_LTR LTR Gypsy 1 283 -224 1 776 2002 24 16 0 chrUextra 25061515 25061768 -3942888 + DM176_LTR LTR Gypsy 251 507 0 1 776 5135 28 0 2 chrUextra 25061892 25062525 -3942131 + R1_DM LINE R1 2106 2737 -2619 1 776 279 29 0 0 chrUextra 25062625 25062659 -3941997 - NTS_DM Other Other -206 34 1 1 776 1370 30 20 20 chrUextra 25062659 25062862 -3941794 - NTS_DM Other Other 0 240 38 1 776 817 0 0 0 chrUextra 25062862 25062958 -3941698 - NTS_DM Other Other -107 133 38 1 776 832 9 9 27 chrUextra 25062958 25063069 -3941587 - NTS_DM Other Other -107 133 25 1 776 21 57 0 0 chrUextra 25063095 25063130 -3941526 + AT_rich Low_complexity Low_complexity 1 35 0 1 776 876 24 0 8 chrUextra 25063130 25063258 -3941398 - NTS_DM Other Other -39 201 75 1 776 4778 32 27 0 chrUextra 25063358 25063983 -3940673 + PROTOP DNA P 66 707 -3773 1 776 366 23 0 0 chrUextra 25064091 25064135 -3940521 + DMCR1A LINE CR1 2795 2838 -1632 1 776 2196 60 22 39 chrUextra 25064132 25064723 -3939933 - DMSAT6 Satellite Satellite -149 580 1 1 776 5188 11 2 0 chrUextra 25064824 25065457 -3939199 - Invader2_I LTR Gypsy -418 4174 3541 1 776 954 20 26 26 chrUextra 25065557 25065709 -3938947 + NTS_DM Other Other 89 240 0 1 776 1734 21 17 17 chrUextra 25065709 25065949 -3938707 + NTS_DM Other Other 1 240 0 1 776 1756 17 17 17 chrUextra 25065949 25066189 -3938467 + NTS_DM Other Other 1 240 0 1 776 5343 3 2 0 chrUextra 25066290 25066913 -3937743 - R1_DM LINE R1 -25 5331 4708 1 776 5034 21 9 8 chrUextra 25067023 25067655 -3937001 + FW_DM LINE Jockey 3891 4523 -169 1 776 304 100 20 0 chrUextra 25067755 25067805 -3936851 + ARS406_DM Unknown Unknown 139 189 -164 1 776 2616 181 20 7 chrUextra 25067768 25068376 -3936280 - SAR_DM Satellite Satellite -620 852 237 1 776 324 117 17 0 chrUextra 25068327 25068387 -3936269 + ARS406_DM Unknown Unknown 1 61 -292 1 776 2429 78 25 22 chrUextra 25068487 25069119 -3935537 - DMSAT6 Satellite Satellite -122 634 1 1 776 2134 208 55 34 chrUextra 25069221 25069844 -3934812 - Gypsy12_LTR LTR Gypsy -198 2138 1503 1 776 5342 5 5 0 chrUextra 25069951 25070574 -3934082 - LSU-rRNA_Dme rRNA rRNA -635 3265 2640 1 776 2552 180 9 22 chrUextra 25070683 25071313 -3933343 + SAR_DM Satellite Satellite 498 1119 -353 1 776 406 0 37 0 chrUextra 25071490 25071544 -3933112 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 776 3516 5 0 0 chrUextra 25071641 25072045 -3932611 + SSU-rRNA_Dme rRNA rRNA 1 404 -1591 1 776 497 91 0 0 chrUextra 25072149 25072257 -3932399 - RSP Satellite Satellite -54 108 1 1 776 836 82 0 14 chrUextra 25072296 25072577 -3932079 - RSP Satellite Satellite 0 277 1 1 776 814 86 0 12 chrUextra 25072616 25072777 -3931879 - RSP Satellite Satellite 0 159 1 1 776 5378 0 2 0 chrUextra 25072879 25073510 -3931146 + ROO_I LTR Pao 3684 4315 -3941 1 776 2366 174 14 11 chrUextra 25073612 25074243 -3930413 - SAR_DM Satellite Satellite -416 633 1 1 776 5277 6 3 5 chrUextra 25074343 25074975 -3929681 - LSU-rRNA_Dme rRNA rRNA -2216 1684 1054 1 776 2846 176 6 6 chrUextra 25075078 25075705 -3928951 + SAR_DM Satellite Satellite 382 1008 -464 1 776 332 25 0 0 chrUextra 25075807 25075847 -3928809 - NTS_DM Other Other -200 40 1 1 776 1674 21 16 25 chrUextra 25075847 25076089 -3928567 - NTS_DM Other Other 0 240 1 1 776 1408 20 20 20 chrUextra 25076089 25076292 -3928364 - NTS_DM Other Other 0 240 38 1 776 817 0 0 0 chrUextra 25076292 25076388 -3928268 - NTS_DM Other Other -107 133 38 1 776 391 0 0 0 chrUextra 25076388 25076439 -3928217 - NTS_DM Other Other -107 133 83 1 776 1075 144 64 5 chrUextra 25076755 25076958 -3927698 + DNAREP1_DM LINE Penelope 22 236 -358 1 776 212 0 0 35 chrUextra 25077009 25077038 -3927618 + (TAA)n Simple_repeat Simple_repeat 2 29 0 1 776 1198 36 499 80 chrUextra 25077271 25077634 -3927022 + MDG1_I LTR Gypsy 6082 6596 0 1 776 383 68 17 0 chrUextra 25077650 25077709 -3926947 + (TAA)n Simple_repeat Simple_repeat 3 62 0 1 776 1239 83 115 0 chrUextra 25077711 25077903 -3926753 + MDG1_LTR LTR Gypsy 94 307 -135 1 776 1828 206 32 65 chrUextra 25078008 25078635 -3926021 + TART LINE telomeric 3729 4029 -10448 1 776 662 200 6 19 chrUextra 25078902 25079060 -3925596 + HETRP_DM Satellite Satellite 1529 1684 -188 1 776 593 207 7 14 chrUextra 25079184 25079326 -3925330 + HETRP_DM Satellite Satellite 1529 1669 -203 1 776 5510 5 0 0 chrUextra 25079467 25080099 -3924557 + BS2 LINE Jockey 3045 3676 -1045 1 776 2851 170 8 9 chrUextra 25080199 25080830 -3923826 - SAR_DM Satellite Satellite -418 1054 425 1 776 1496 170 25 8 chrUextra 25080945 25081558 -3923098 + SAR_DM Satellite Satellite 1 623 -858 1 776 5545 3 0 0 chrUextra 25081663 25082295 -3922361 - BS LINE Jockey -44 5082 4451 1 776 1507 35 0 0 chrUextra 25082395 25082592 -3922064 + R1_DM LINE R1 895 1091 -4265 1 776 3556 14 0 0 chrUextra 25082606 25083027 -3921629 + R1_DM LINE R1 1763 2183 -3173 1 776 2571 67 29 8 chrUextra 25083127 25083759 -3920897 - DMSAT6 Satellite Satellite -61 645 1 1 776 2414 105 6 32 chrUextra 25084591 25085217 -3919439 - DMSAT6 Satellite Satellite -52 609 1 1 776 2565 176 21 21 chrUextra 25085323 25085955 -3918701 - SAR_DM Satellite Satellite -582 890 259 1 776 2644 183 13 8 chrUextra 25086057 25086685 -3917971 - SAR_DM Satellite Satellite -549 923 293 1 776 5271 14 0 0 chrUextra 25086787 25087419 -3917237 - DOC2_DM LINE Jockey -1555 3238 2607 1 776 251 61 0 0 chrUextra 25087519 25087552 -3917104 - LSU-rRNA_Dme rRNA rRNA -1228 2672 2640 1 776 4478 0 0 2 chrUextra 25087550 25088068 -3916588 - R1_DM LINE R1 0 5356 4840 1 776 730 0 12 0 chrUextra 25088065 25088151 -3916505 - LSU-rRNA_Dme rRNA rRNA -1262 2638 2552 1 776 1621 224 43 44 chrUextra 25088251 25088883 -3915773 - SAR_DM Satellite Satellite -500 972 342 1 776 2242 89 57 24 chrUextra 25088983 25089615 -3915041 + DMSAT6 Satellite Satellite 1 653 -3 1 776 5312 3 5 0 chrUextra 25090447 25091079 -3913577 + Gypsy_I LTR Gypsy 5 639 -5868 1 776 5027 9 73 0 chrUextra 25091181 25091811 -3912845 - FW_DM LINE Jockey -2633 2059 1384 1 776 2629 173 47 8 chrUextra 25091921 25092540 -3912116 - SAR_DM Satellite Satellite -590 882 240 1 776 2679 167 45 11 chrUextra 25092651 25093275 -3911381 - SAR_DM Satellite Satellite -416 1056 412 1 776 4905 35 2 2 chrUextra 25093375 25094007 -3910649 - PROTOP DNA P -3801 679 48 1 776 1620 7 0 0 chrUextra 25094111 25094531 -3910125 + (GAGAA)n Simple_repeat Simple_repeat 1 420 0 1 776 5159 8 5 2 chrUextra 25095571 25096203 -3908453 + HETA LINE telomeric 2899 3532 -2549 1 776 5084 9 0 2 chrUextra 25096303 25096935 -3907721 + DM297_I LTR Gypsy 4405 5035 -1132 1 776 887 70 14 7 chrUextra 25097035 25097180 -3907476 - DMSAT6 Satellite Satellite -61 409 264 1 776 2428 88 26 15 chrUextra 25097193 25097655 -3907001 - DMSAT6 Satellite Satellite -3 467 1 1 776 220 252 26 26 chrUextra 25098049 25098163 -3906493 + (CTAAA)n Simple_repeat Simple_repeat 3 116 0 1 776 2527 175 10 24 chrUextra 25098499 25099119 -3905537 + SAR_DM Satellite Satellite 508 1118 -354 1 776 314 202 0 21 chrUextra 25099033 25099129 -3905527 - XDMR_DM Unknown Unknown 0 360 267 1 776 2669 173 30 13 chrUextra 25099231 25099863 -3904793 + SAR_DM Satellite Satellite 228 870 -602 1 776 704 174 173 20 chrUextra 25099963 25100217 -3904439 - Gypsy12A_LTR LTR Gypsy -1106 1230 826 1 776 552 251 27 38 chrUextra 25100270 25100595 -3904061 - Gypsy12A_LTR LTR Gypsy -1786 550 238 1 776 2076 208 59 6 chrUextra 25100698 25101324 -3903332 + SAR_DM Satellite Satellite 1 658 -396 1 776 399 0 62 47 chrUextra 25101427 25101491 -3903165 + NTS_DM Other Other 176 240 0 1 776 1241 6 0 30 chrUextra 25101491 25101658 -3902998 + NTS_DM Other Other 1 162 -78 1 776 488 119 36 0 chrUextra 25101768 25101852 -3902804 + NTS_DM Other Other 4 90 -150 1 776 3442 118 9 11 chrUextra 25102159 25102788 -3901868 - BATUMI_I LTR Pao -2927 4987 4315 1 776 2770 164 15 7 chrUextra 25102899 25103506 -3901150 - SAR_DM Satellite Satellite -535 937 326 1 776 24 32 0 0 chrUextra 25103925 25103956 -3900700 + AT_rich Low_complexity Low_complexity 1 31 0 1 776 2662 172 13 15 chrUextra 25104359 25104962 -3899694 - SAR_DM Satellite Satellite -625 847 246 1 776 313 138 0 15 chrUextra 25104921 25104987 -3899669 + ARS406_DM Unknown Unknown 1 65 -288 1 776 5047 9 13 3 chrUextra 25105087 25105719 -3898937 + Invader2_I LTR Gypsy 1865 2502 -2090 1 776 5198 3 2 3 chrUextra 25105819 25106451 -3898205 - R1_DM LINE R1 -4136 1220 590 1 776 2624 181 7 8 chrUextra 25107283 25107889 -3896767 - SAR_DM Satellite Satellite -676 796 192 1 776 846 66 0 0 chrUextra 25107793 25107915 -3896741 + ARS406_DM Unknown Unknown 1 122 -231 1 776 2957 160 8 8 chrUextra 25108015 25108632 -3896024 - SAR_DM Satellite Satellite -487 985 369 1 776 5329 2 2 5 chrUextra 25108751 25109379 -3895277 - LSU-rRNA_Dme rRNA rRNA -2540 1360 735 1 776 1893 0 9 4 chrUextra 25109479 25109712 -3894944 + LSU-rRNA_Dme rRNA rRNA 1555 1788 -2112 1 776 3130 0 0 0 chrUextra 25109756 25110111 -3894545 + LSU-rRNA_Dme rRNA rRNA 1788 2142 -1758 1 776 2727 178 13 6 chrUextra 25110214 25110843 -3893813 + SAR_DM Satellite Satellite 230 862 -610 1 776 1620 2 0 2 chrUextra 25110943 25111355 -3893301 + (CACAA)n Simple_repeat Simple_repeat 1 411 0 1 776 1359 0 0 0 chrUextra 25111675 25111833 -3892823 - HMSBEAGLE_I LTR Gypsy -6371 158 1 1 776 2316 8 0 0 chrUextra 25111832 25112098 -3892558 - DMLTR5 LTR Gypsy 0 266 1 1 776 1158 122 0 0 chrUextra 25112118 25112298 -3892358 + (TA)n Simple_repeat Simple_repeat 1 180 0 1 776 2434 182 24 15 chrUextra 25112425 25113039 -3891617 - SAR_DM Satellite Satellite -396 1076 457 1 776 3428 260 21 42 chrUextra 25113139 25114497 -3890159 + SAR_DM Satellite Satellite 1 1329 -216 1 776 2306 89 25 17 chrUextra 25114603 25115235 -3889421 + DMSAT6 Satellite Satellite 1 636 -32 1 776 2725 179 11 9 chrUextra 25115335 25115966 -3888690 + SAR_DM Satellite Satellite 302 933 -539 1 776 1017 268 13 24 chrUextra 25116067 25116519 -3888137 + Gypsy11_I LTR Gypsy 2941 3387 -137 1 776 261 306 0 0 chrUextra 25117303 25117388 -3887268 - ROO_I LTR Pao -2946 5310 5226 1 776 1608 184 91 29 chrUextra 25117543 25117642 -3887014 - SAR_DM Satellite Satellite -416 657 535 1 776 640 74 0 10 chrUextra 25117642 25117738 -3886918 + ARS406_DM Unknown Unknown 95 189 -164 1 776 1608 184 91 29 chrUextra 25117738 25118162 -3886494 - SAR_DM Satellite Satellite -416 534 1 1 776 5435 0 0 2 chrUextra 25118263 25118893 -3885763 + LSU-rRNA_Dme rRNA rRNA 647 1275 -2625 1 776 2858 161 22 10 chrUextra 25118999 25119627 -3885029 - SAR_DM Satellite Satellite -416 1056 421 1 776 2824 254 27 20 chrUextra 25119728 25121018 -3883638 - SAR_DM Satellite Satellite -718 1298 1 1 776 534 55 0 0 chrUextra 25121018 25121091 -3883565 + ARS406_DM Unknown Unknown 73 145 -208 1 776 449 93 0 13 chrUextra 25121191 25121267 -3883389 - ARS406_DM Unknown Unknown -278 75 1 1 776 2599 182 7 10 chrUextra 25121204 25121820 -3882836 + SAR_DM Satellite Satellite 224 837 -635 1 776 2491 93 13 26 chrUextra 25121930 25122540 -3882116 + DMSAT6 Satellite Satellite 1 602 -1 1 776 2146 12 0 0 chrUextra 25122655 25122907 -3881749 + Invader1_LTR LTR Gypsy 172 423 0 1 776 487 240 0 16 chrUextra 25122924 25123047 -3881609 - HETRP_DM Satellite Satellite -203 1669 1549 1 776 390 21 0 0 chrUextra 25123047 25123094 -3881562 + (TC)n Simple_repeat Simple_repeat 2 48 0 1 776 257 194 29 15 chrUextra 25123219 25123287 -3881369 - HETRP_DM Satellite Satellite -197 1675 1607 1 776 1620 5 0 0 chrUextra 25123387 25124019 -3880637 + (CATCT)n Simple_repeat Simple_repeat 1 632 0 1 776 826 0 0 0 chrUextra 25124119 25124213 -3880443 - ROO_I LTR Pao -8162 94 1 1 776 3736 0 0 2 chrUextra 25124213 25124642 -3880014 - ROO_LTR LTR Pao 0 428 1 1 776 354 204 0 0 chrUextra 25124648 25124746 -3879910 + (CTATT)n Simple_repeat Simple_repeat 2 99 0 1 776 5410 5 0 0 chrUextra 25124851 25125483 -3879173 + R1_DM LINE R1 3055 3686 -1670 1 776 2273 221 27 17 chrUextra 25125583 25126215 -3878441 + G_DM LINE Jockey 900 1537 -2809 1 776 1486 112 8 4 chrUextra 25126458 25126701 -3877955 + BS2 LINE Jockey 14 257 -4464 1 776 1723 49 12 8 chrUextra 25126700 25126947 -3877709 - G5_DM LINE Jockey 0 4856 4609 1 776 5035 35 2 0 chrUextra 25127047 25127679 -3876977 - NINJA_I LTR Pao -1022 4989 4357 1 776 880 73 3 20 chrUextra 25127779 25128411 -3876245 - RSP Satellite Satellite -27 621 1 1 776 21 95 0 0 chrUextra 25129481 25129544 -3875112 + AT_rich Low_complexity Low_complexity 1 63 0 1 776 2365 3 0 78 chrUextra 25129556 25129875 -3874781 + LSU-rRNA_Dme rRNA rRNA 1 294 -3606 1 776 2538 177 10 12 chrUextra 25129975 25130581 -3874075 + SAR_DM Satellite Satellite 472 1076 -396 1 776 236 121 16 49 chrUextra 25130546 25130607 -3874049 - XDMR_DM Unknown Unknown 0 360 302 1 776 5464 3 0 0 chrUextra 25130710 25131339 -3873317 + LSU-rRNA_Dme rRNA rRNA 1826 2454 -1446 1 776 1182 58 0 0 chrUextra 25131439 25131610 -3873046 - QUASIMODO_I LTR Gypsy -1430 4630 4460 1 776 22 56 0 0 chrUextra 25131610 25131646 -3873010 + AT_rich Low_complexity Low_complexity 1 36 0 1 776 2631 9 84 0 chrUextra 25131726 25132071 -3872585 - QUASIMODO_I LTR Gypsy -1068 4992 4619 1 776 1393 192 9 25 chrUextra 25132178 25132493 -3872163 - Gypsy12_LTR LTR Gypsy -2014 322 13 1 776 2096 88 0 10 chrUextra 25132505 25132803 -3871853 - Gypsy12_I LTR Gypsy 0 5546 5252 1 776 5098 18 8 8 chrUextra 25132903 25133535 -3871121 + FW_DM LINE Jockey 3863 4494 -198 1 776 21 57 0 0 chrUextra 25133703 25133738 -3870918 + AT_rich Low_complexity Low_complexity 1 35 0 1 776 600 41 0 0 chrUextra 25134194 25134267 -3870389 - PROTOP_A DNA P -1 1104 1031 1 776 5453 2 0 0 chrUextra 25134367 25134999 -3869657 - LSU-rRNA_Dme rRNA rRNA -2668 1232 601 1 776 672 108 0 0 chrUextra 25135100 25135200 -3869456 - S_DM DNA Tc1 -654 1082 983 1 776 4415 13 0 0 chrUextra 25135200 25135731 -3868925 - PROTOP_A DNA P 0 1105 575 1 776 2530 179 8 8 chrUextra 25135831 25136428 -3868228 - SAR_DM Satellite Satellite -684 788 192 1 776 859 92 0 0 chrUextra 25136332 25136463 -3868193 + ARS406_DM Unknown Unknown 1 131 -222 1 776 468 0 0 0 chrUextra 25137295 25137347 -3867309 + (CAAGA)n Simple_repeat Simple_repeat 5 56 0 1 776 1085 20 0 7 chrUextra 25138027 25138177 -3866479 + NTS_DM Other Other 53 201 -39 1 776 21 57 0 0 chrUextra 25138177 25138212 -3866444 + AT_rich Low_complexity Low_complexity 1 35 0 1 776 806 19 9 27 chrUextra 25138238 25138349 -3866307 + NTS_DM Other Other 25 133 -107 1 776 1438 15 20 20 chrUextra 25138349 25138552 -3866104 + NTS_DM Other Other 38 240 0 1 776 870 28 0 0 chrUextra 25138552 25138659 -3865997 + NTS_DM Other Other 1 107 -133 1 776 5430 2 0 2 chrUextra 25138759 25139391 -3865265 + R1_DM LINE R1 1703 2333 -3023 1 776 1727 186 60 28 chrUextra 25139494 25140122 -3864534 - SAR_DM Satellite Satellite -514 648 1 1 776 2250 117 14 29 chrUextra 25140222 25140853 -3863803 - DMSAT6 Satellite Satellite -17 622 1 1 776 2634 182 10 11 chrUextra 25140953 25141580 -3863076 - SAR_DM Satellite Satellite -652 820 195 1 776 802 23 38 23 chrUextra 25141684 25141817 -3862839 + NTS_DM Other Other 106 240 0 1 776 1850 4 17 13 chrUextra 25141817 25142056 -3862600 + NTS_DM Other Other 1 240 0 1 776 1861 0 17 13 chrUextra 25142056 25142295 -3862361 + NTS_DM Other Other 1 240 0 1 776 5373 16 0 0 chrUextra 25142415 25143046 -3861610 + R2_DM LINE R2 2935 3565 -42 1 776 5167 24 5 0 chrUextra 25143146 25143777 -3860879 + R1_DM LINE R1 2925 3558 -1798 1 776 3183 81 61 5 chrUextra 25143989 25144508 -3860148 + TRANSIB2 DNA Transib 1810 2745 -99 1 776 2448 176 17 21 chrUextra 25144608 25145239 -3859417 + SAR_DM Satellite Satellite 180 808 -664 1 776 2999 240 32 15 chrUextra 25145339 25146684 -3857972 - SAR_DM Satellite Satellite -621 1368 1 1 776 770 62 9 0 chrUextra 25146589 25146701 -3857955 + ARS406_DM Unknown Unknown 1 113 -240 1 776 2605 166 33 12 chrUextra 25146819 25147418 -3857238 + SAR_DM Satellite Satellite 326 937 -535 1 776 1008 44 0 0 chrUextra 25147295 25147432 -3857224 - ARS406_DM Unknown Unknown -164 189 53 1 776 5372 14 0 0 chrUextra 25147532 25148163 -3856493 - DMRT1A LINE R1 -1363 3820 3190 1 776 2782 178 11 5 chrUextra 25148267 25148893 -3855763 + SAR_DM Satellite Satellite 224 853 -619 1 776 536 310 18 4 chrUextra 25149381 25149608 -3855048 + Invader4_I LTR Gypsy 1 230 -2183 1 776 1625 19 0 5 chrUextra 25149727 25149934 -3854722 - NTS_DM Other Other -34 206 1 1 776 1408 20 20 20 chrUextra 25149934 25150137 -3854519 - NTS_DM Other Other 0 240 38 1 776 817 0 0 0 chrUextra 25150137 25150233 -3854423 - NTS_DM Other Other -107 133 38 1 776 779 19 9 36 chrUextra 25150233 25150345 -3854311 - NTS_DM Other Other -107 133 25 1 776 1116 139 0 0 chrUextra 25150469 25150818 -3853838 + (TA)n Simple_repeat Simple_repeat 1 349 0 1 776 2291 11 0 0 chrUextra 25150821 25151087 -3853569 + DMLTR5 LTR Gypsy 1 266 0 1 776 4326 27 2 46 chrUextra 25151187 25151818 -3852838 - DM176_I LTR Gypsy -5465 955 353 1 776 2401 97 22 23 chrUextra 25151942 25152547 -3852109 - DMSAT6 Satellite Satellite 0 604 1 1 776 3277 67 4 13 chrUextra 25152649 25153115 -3851541 - R1_DM LINE R1 -4872 484 23 1 776 1216 21 0 0 chrUextra 25153136 25153280 -3851376 - R1_DM LINE R1 0 5356 5213 1 776 2294 116 32 3 chrUextra 25153380 25154011 -3850645 - DMSAT6 Satellite Satellite -250 649 1 1 776 5384 3 5 3 chrUextra 25154842 25155473 -3849183 + SSU-rRNA_Dme rRNA rRNA 1046 1677 -318 1 776 4937 11 9 2 chrUextra 25155574 25156204 -3848452 + PROTOP_A DNA P 308 942 -163 1 776 2682 180 10 8 chrUextra 25156304 25156919 -3847737 + SAR_DM Satellite Satellite 461 1076 -396 1 776 3092 85 151 39 chrUextra 25157035 25157625 -3847031 + TART_B1 LINE telomeric 3528 4183 -6471 1 776 293 26 0 0 chrUextra 25157628 25157666 -3846990 + TART LINE telomeric 1452 1489 -12988 1 776 908 83 5 17 chrUextra 25157766 25158382 -3846274 - RSP Satellite Satellite -85 608 1 1 776 2759 181 6 8 chrUextra 25158497 25159128 -3845528 - SAR_DM Satellite Satellite -645 827 198 1 776 4210 4 0 0 chrUextra 25159368 25159859 -3844797 + FW_DM LINE Jockey 887 1377 -3315 1 776 25 48 0 46 chrUextra 25160209 25160274 -3844382 + AT_rich Low_complexity Low_complexity 1 62 0 1 776 478 112 0 48 chrUextra 25160358 25160442 -3844214 + Baggins1 LINE LOA 5036 5115 -338 1 776 508 83 36 0 chrUextra 25160407 25160491 -3844165 - FB4_DM DNA Tc1 -3676 413 327 1 776 771 42 0 0 chrUextra 25160494 25160590 -3844066 + Jockey2 LINE Jockey 2530 2625 -803 1 776 2645 3 0 3 chrUextra 25160690 25160999 -3843657 + R2_DM LINE R2 3300 3607 0 1 776 455 36 0 0 chrUextra 25160996 25161051 -3843605 + LSU-rRNA_Dme rRNA rRNA 2578 2632 -1268 1 776 2288 0 7 0 chrUextra 25161051 25161321 -3843335 + R1_DM LINE R1 1 272 -5084 1 776 2640 178 11 11 chrUextra 25161422 25162052 -3842604 - SAR_DM Satellite Satellite -396 1076 447 1 776 1116 0 0 0 chrUextra 25162152 25162276 -3842380 + (GAGAA)n Simple_repeat Simple_repeat 2 125 0 1 776 3725 40 18 0 chrUextra 25162280 25162781 -3841875 - ZAM_I LTR Gypsy -861 6629 6120 1 776 5263 8 0 0 chrUextra 25162883 25163514 -3841142 - STALKER4_I LTR Gypsy -4539 1991 1361 1 776 2396 163 17 9 chrUextra 25163614 25164245 -3840411 - SAR_DM Satellite Satellite -1000 635 1 1 776 5136 24 3 0 chrUextra 25164345 25164976 -3839680 - R1_DM LINE R1 -2111 3245 2613 1 776 5360 2 0 0 chrUextra 25165076 25165707 -3838949 + NOMAD_I LTR Gypsy 5077 5707 -865 1 1 2753 169 10 11 chrUextra 25165807 25166423 -3838233 - SAR_DM Satellite Satellite -489 983 369 1 777 5486 2 2 2 chrUextra 25166538 25167169 -3837487 + LSU-rRNA_Dme rRNA rRNA 3195 3825 -75 1 777 204 40 0 0 chrUextra 25168000 25168025 -3836631 + (TTCTC)n Simple_repeat Simple_repeat 5 29 0 1 777 857 217 26 22 chrUextra 25168748 25168979 -3835677 + HOBO DNA hAT 2785 3016 0 1 777 26 0 0 0 chrUextra 25169003 25169029 -3835627 + AT_rich Low_complexity Low_complexity 1 26 0 1 777 1152 100 31 19 chrUextra 25169094 25169362 -3835294 + DNAREP1_DM LINE Penelope 4 320 -274 1 777 4299 98 32 0 chrUextra 25169462 25170093 -3834563 + Gypsy12_I LTR Gypsy 1643 2293 -3253 1 777 2817 162 22 11 chrUextra 25170194 25170824 -3833832 + SAR_DM Satellite Satellite 352 988 -484 1 777 2577 184 8 10 chrUextra 25170946 25171555 -3833101 - SAR_DM Satellite Satellite -396 1076 469 1 777 2145 116 22 23 chrUextra 25171657 25172258 -3832398 + DMSAT6 Satellite Satellite 1 599 -71 1 777 1643 172 12 8 chrUextra 25172394 25173017 -3831639 + SAR_DM Satellite Satellite 1 625 -677 1 777 211 161 36 0 chrUextra 25173692 25173748 -3830908 + GA-rich Low_complexity Low_complexity 2 59 0 1 777 1044 8 0 8 chrUextra 25173848 25173973 -3830683 + MICROPIA_I LTR Gypsy 512 635 -3841 1 777 4370 12 0 0 chrUextra 25173964 25174479 -3830177 + MICROPIA_I LTR Gypsy 744 1258 -3218 1 777 4315 2 0 46 chrUextra 25174580 25175128 -3829528 - LSU-rRNA_Dme rRNA rRNA -3377 523 1 1 777 21 95 0 0 chrUextra 25175140 25175203 -3829453 + AT_rich Low_complexity Low_complexity 1 63 0 1 777 2594 170 19 27 chrUextra 25175312 25175941 -3828715 + SAR_DM Satellite Satellite 185 808 -664 1 777 2723 160 46 13 chrUextra 25176043 25176671 -3827985 + SAR_DM Satellite Satellite 346 994 -478 1 777 5104 27 0 2 chrUextra 25176772 25177402 -3827254 - R1_DM LINE R1 -2115 3241 2613 1 777 844 35 0 9 chrUextra 25177503 25177618 -3827038 - NTS_DM Other Other -89 151 38 1 777 870 9 0 27 chrUextra 25177618 25177730 -3826926 - NTS_DM Other Other -107 133 25 1 777 22 56 0 0 chrUextra 25177756 25177792 -3826864 + AT_rich Low_complexity Low_complexity 1 36 0 1 777 255 125 0 0 chrUextra 25177805 25177845 -3826811 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 777 246 150 0 0 chrUextra 25177888 25177928 -3826728 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 777 246 150 0 0 chrUextra 25177980 25178020 -3826636 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 777 234 150 0 0 chrUextra 25178072 25178112 -3826544 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 777 756 93 0 0 chrUextra 25178234 25178352 -3826304 - ARS406_DM Unknown Unknown -235 118 1 1 777 2582 188 5 7 chrUextra 25178256 25178865 -3825791 + SAR_DM Satellite Satellite 192 799 -673 1 777 1222 18 0 12 chrUextra 25178985 25179151 -3825505 - NTS_DM Other Other -39 201 38 1 777 870 9 0 27 chrUextra 25179151 25179263 -3825393 - NTS_DM Other Other -107 133 25 1 777 1252 18 0 6 chrUextra 25179315 25179480 -3825176 - NTS_DM Other Other -39 201 38 1 777 870 9 0 27 chrUextra 25179480 25179592 -3825064 - NTS_DM Other Other -107 133 25 1 777 1093 31 0 6 chrUextra 25179696 25179858 -3824798 + FW_DM LINE Jockey 4532 4692 0 1 777 254 29 0 0 chrUextra 25179865 25179899 -3824757 - R1_DM LINE R1 -3966 1390 1357 1 777 3208 35 49 2 chrUextra 25179899 25180327 -3824329 - R1_DM LINE R1 -4150 1206 759 1 777 4926 16 33 2 chrUextra 25181158 25181789 -3822867 - STALKER4_I LTR Gypsy -2716 3814 3164 1 777 4681 41 51 2 chrUextra 25181889 25182520 -3822136 - MDG1_I LTR Gypsy -3438 3158 2497 1 777 5382 2 0 0 chrUextra 25182620 25183251 -3821405 + ROO_I LTR Pao 6685 7315 -941 1 777 1620 51 0 2 chrUextra 25184086 25184689 -3819967 + (CAAGA)n Simple_repeat Simple_repeat 1 601 0 1 777 1513 0 25 15 chrUextra 25184813 25185016 -3819640 + NTS_DM Other Other 36 240 0 1 777 1679 0 0 0 chrUextra 25185016 25185217 -3819439 + NTS_DM Other Other 1 201 -39 1 777 840 9 0 35 chrUextra 25185269 25185382 -3819274 + NTS_DM Other Other 25 133 -107 1 777 492 32 0 0 chrUextra 25185382 25185444 -3819212 + NTS_DM Other Other 38 99 -141 1 777 2826 144 14 37 chrUextra 25185544 25186166 -3818490 - SAR_DM Satellite Satellite -539 933 326 1 777 5193 3 0 0 chrUextra 25186275 25186877 -3817779 + R1_DM LINE R1 4755 5356 0 1 777 247 32 0 0 chrUextra 25186875 25186906 -3817750 + LSU-rRNA_Dme rRNA rRNA 2640 2670 -1230 1 777 2527 189 5 21 chrUextra 25187009 25187631 -3817025 + SAR_DM Satellite Satellite 507 1118 -354 1 777 46 83 0 0 chrUextra 25188201 25188310 -3816346 + AT_rich Low_complexity Low_complexity 1 109 0 1 777 21 57 0 0 chrUextra 25188505 25188540 -3816116 + AT_rich Low_complexity Low_complexity 1 35 0 1 777 1252 18 0 6 chrUextra 25188540 25188705 -3815951 - NTS_DM Other Other -39 201 38 1 777 870 9 0 27 chrUextra 25188705 25188817 -3815839 - NTS_DM Other Other -107 133 25 1 777 1252 18 0 6 chrUextra 25188869 25189034 -3815622 - NTS_DM Other Other -39 201 38 1 777 488 15 0 0 chrUextra 25189034 25189099 -3815557 - NTS_DM Other Other -107 133 69 1 777 587 0 0 0 chrUextra 25189930 25189997 -3814659 + R1_DM LINE R1 5290 5356 0 1 777 4930 3 0 0 chrUextra 25189995 25190561 -3814095 + LSU-rRNA_Dme rRNA rRNA 2640 3205 -695 1 777 3001 157 13 9 chrUextra 25191392 25192023 -3812633 - SAR_DM Satellite Satellite -450 1022 390 1 777 638 28 36 36 chrUextra 25192123 25192234 -3812422 + NTS_DM Other Other 130 240 0 1 777 1756 17 17 17 chrUextra 25192234 25192474 -3812182 + NTS_DM Other Other 1 240 0 1 777 1690 30 17 17 chrUextra 25192474 25192714 -3811942 + NTS_DM Other Other 1 240 0 1 777 332 25 0 0 chrUextra 25192714 25192754 -3811902 + NTS_DM Other Other 1 40 -200 1 777 1150 7 0 0 chrUextra 25192926 25193061 -3811595 + 5S_DM RNA RNA 1 135 0 1 777 1176 0 0 0 chrUextra 25193285 25193420 -3811236 + 5S_DM RNA RNA 1 135 0 1 777 2753 174 24 11 chrUextra 25193588 25194216 -3810440 - SAR_DM Satellite Satellite -411 1061 426 1 777 1578 24 0 0 chrUextra 25194554 25194806 -3809850 + (TTCTC)n Simple_repeat Simple_repeat 1 252 0 1 777 1059 37 0 0 chrUextra 25194811 25194947 -3809709 + (GAGAA)n Simple_repeat Simple_repeat 2 137 0 1 777 28 48 0 0 chrUextra 25195333 25195375 -3809281 + AT_rich Low_complexity Low_complexity 1 42 0 1 777 5286 2 2 0 chrUextra 25195778 25196409 -3808247 - ROO_I LTR Pao -4143 4113 3482 1 777 2907 164 17 8 chrUextra 25196509 25197140 -3807516 + SAR_DM Satellite Satellite 392 1028 -444 1 777 5255 0 0 0 chrUextra 25197240 25197870 -3806786 + STALKER4_I LTR Gypsy 5595 6224 -306 1 777 962 184 24 11 chrUextra 25197970 25198591 -3806065 - SAR_DM Satellite Satellite -839 628 1 1 777 5273 11 16 0 chrUextra 25198700 25199330 -3805326 + DMRT1B LINE R1 2936 3575 -1608 1 777 2701 181 11 8 chrUextra 25199430 25200060 -3804596 + SAR_DM Satellite Satellite 284 915 -557 1 777 244 0 0 132 chrUextra 25200161 25200237 -3804419 + (CAAAAA)n Simple_repeat Simple_repeat 3 68 0 1 777 5124 24 5 0 chrUextra 25200890 25201520 -3803136 + R1_DM LINE R1 2323 2955 -2401 1 777 5257 2 2 0 chrUextra 25201649 25202250 -3802406 - LSU-rRNA_Dme rRNA rRNA 0 3900 3299 1 777 2694 0 0 0 chrUextra 25202350 25202665 -3801991 - NOMAD_LTR LTR Gypsy -203 315 1 1 777 551 7 130 7 chrUextra 25202684 25202978 -3801678 + (TA)n Simple_repeat Simple_repeat 1 330 0 1 777 379 105 0 0 chrUextra 25203082 25203139 -3801517 - Gypsy12_I LTR Gypsy -1529 4017 3961 1 777 3742 100 2 2 chrUextra 25203167 25203710 -3800946 - Gypsy12_I LTR Gypsy -2430 3116 2574 1 777 2658 156 24 13 chrUextra 25203843 25204440 -3800216 + SAR_DM Satellite Satellite 369 971 -501 1 777 1428 21 0 11 chrUextra 25204540 25204728 -3799928 - NTS_DM Other Other -54 186 1 1 777 1683 34 17 17 chrUextra 25204728 25204968 -3799688 - NTS_DM Other Other 0 240 1 1 777 1417 20 20 20 chrUextra 25204968 25205170 -3799486 - NTS_DM Other Other 0 240 39 1 777 5119 8 2 19 chrUextra 25206000 25206630 -3798026 - DOC LINE Jockey -3934 791 173 1 777 5392 2 0 2 chrUextra 25206739 25207360 -3797296 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2013 1 777 22 56 0 0 chrUextra 25207481 25207517 -3797139 + AT_rich Low_complexity Low_complexity 1 36 0 1 777 255 125 0 0 chrUextra 25207530 25207570 -3797086 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 777 246 150 0 0 chrUextra 25207613 25207653 -3797003 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 777 246 150 0 0 chrUextra 25207705 25207745 -3796911 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 777 22 56 0 0 chrUextra 25207750 25207786 -3796870 + AT_rich Low_complexity Low_complexity 1 36 0 1 777 2029 0 0 0 chrUextra 25207858 25208090 -3796566 - LSU-rRNA_Dme rRNA rRNA 0 3900 3669 1 777 2742 178 11 9 chrUextra 25208190 25208820 -3795836 - SAR_DM Satellite Satellite -539 933 303 1 777 2932 175 6 5 chrUextra 25208920 25209550 -3795106 + SAR_DM Satellite Satellite 248 878 -594 1 777 2936 35 51 2 chrUextra 25209650 25210045 -3794611 - PROTOP DNA P -4066 414 1 1 777 5294 14 0 0 chrUextra 25210381 25211010 -3793646 - FW_DM LINE Jockey -3461 1231 603 1 777 2057 188 110 32 chrUextra 25211112 25211739 -3792917 - TAHRE LINE telomeric -597 9866 9191 1 777 5503 2 2 0 chrUextra 25211840 25212470 -3792186 + LSU-rRNA_Dme rRNA rRNA 3066 3696 -204 1 777 3659 68 11 26 chrUextra 25213300 25213921 -3790735 + FB4_DM DNA Tc1 2835 3446 -643 1 777 3698 50 9 9 chrUextra 25213363 25213930 -3790726 - FB4_DM DNA Tc1 -3079 1010 444 1 777 313 314 7 7 chrUextra 25214305 25214446 -3790210 - Invader3_I LTR Gypsy -1859 3029 2889 1 777 2506 188 5 24 chrUextra 25214760 25215388 -3789268 + SAR_DM Satellite Satellite 498 1113 -359 1 777 539 49 74 0 chrUextra 25215490 25215571 -3789085 - TART LINE telomeric -10708 3769 3683 1 777 2954 101 22 54 chrUextra 25215566 25216120 -3788536 - TART LINE telomeric -11115 3362 2827 1 777 5185 9 3 3 chrUextra 25216220 25216850 -3787806 - R1_DM LINE R1 -1106 4250 3621 1 777 976 110 11 11 chrUextra 25216954 25217129 -3787527 + SAR_DM Satellite Satellite 729 903 -569 1 777 1930 178 7 9 chrUextra 25217144 25217580 -3787076 + SAR_DM Satellite Satellite 496 930 -542 1 777 300 279 107 89 chrUextra 25217878 25218158 -3786498 - Invader1_LTR LTR Gypsy -55 368 84 1 777 630 0 0 0 chrUextra 25218970 25219040 -3785616 + (TTCTC)n Simple_repeat Simple_repeat 2 71 0 1 777 1505 0 6 0 chrUextra 25219140 25219314 -3785342 + LSU-rRNA_Dme rRNA rRNA 2467 2641 -1259 1 777 3663 0 5 0 chrUextra 25219345 25219770 -3784886 + R1_DM LINE R1 1 427 -4929 1 777 2615 188 8 7 chrUextra 25219870 25220481 -3784175 + SAR_DM Satellite Satellite 465 1076 -396 1 777 1931 189 19 5 chrUextra 25220616 25221197 -3783459 + SAR_DM Satellite Satellite 1 588 -645 1 777 3027 169 8 5 chrUextra 25221330 25221960 -3782696 - SAR_DM Satellite Satellite -584 888 257 1 777 5172 22 0 2 chrUextra 25222060 25222690 -3781966 - R1_DM LINE R1 -2615 2741 2113 1 777 5374 2 2 0 chrUextra 25222790 25223420 -3781236 - FW_DM LINE Jockey -2606 2086 1456 1 777 2486 184 22 10 chrUextra 25224980 25225583 -3779073 + SAR_DM Satellite Satellite 467 1076 -396 1 777 5125 36 0 0 chrUextra 25225710 25226340 -3778316 + R1_DM LINE R1 3100 3729 -1627 1 777 5397 0 0 2 chrUextra 25226440 25227070 -3777586 - LSU-rRNA_Dme rRNA rRNA -2751 1149 521 1 777 5115 27 0 2 chrUextra 25227170 25227800 -3776856 + STALKER4_I LTR Gypsy 4169 4797 -1733 1 777 602 129 0 38 chrUextra 25227900 25228005 -3776651 - Gypsy12_I LTR Gypsy -3943 1603 1503 1 777 3254 91 44 25 chrUextra 25228012 25228530 -3776126 - Gypsy12_I LTR Gypsy -3992 1554 1027 1 777 2382 90 48 6 chrUextra 25228631 25229260 -3775396 - DMSAT6 Satellite Satellite -82 654 1 1 777 4541 3 5 78 chrUextra 25229360 25229990 -3774666 + LSU-rRNA_Dme rRNA rRNA 1260 1843 -2057 1 777 360 94 62 0 chrUextra 25230090 25230154 -3774502 - TART LINE telomeric -4186 10291 10224 1 777 3036 101 172 13 chrUextra 25230157 25230709 -3773947 - TART LINE telomeric -6638 7839 7200 1 777 5251 18 0 2 chrUextra 25230820 25231450 -3773206 - R1_DM LINE R1 -676 4680 4052 1 777 1426 176 13 9 chrUextra 25231550 25231866 -3772790 + SAR_DM Satellite Satellite 434 750 -722 1 777 2350 13 0 23 chrUextra 25231874 25232180 -3772476 - DOC2_DM LINE Jockey 0 4793 4495 1 777 2618 179 11 22 chrUextra 25232285 25232910 -3771746 + SAR_DM Satellite Satellite 1 618 -396 1 777 3942 141 0 0 chrUextra 25233016 25233640 -3771016 - Gypsy_I LTR Gypsy -3459 3048 2425 1 777 401 0 0 57 chrUextra 25234470 25234523 -3770133 - NTS_DM Other Other -166 74 25 1 777 1252 18 0 6 chrUextra 25234575 25234740 -3769916 - NTS_DM Other Other -39 201 38 1 777 870 9 0 27 chrUextra 25234740 25234852 -3769804 - NTS_DM Other Other -107 133 25 1 777 22 56 0 0 chrUextra 25234878 25234914 -3769742 + AT_rich Low_complexity Low_complexity 1 36 0 1 777 255 125 0 0 chrUextra 25234927 25234967 -3769689 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 777 246 150 0 0 chrUextra 25235010 25235050 -3769606 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 777 3217 61 46 0 chrUextra 25235200 25235657 -3768999 + PROTOP_A DNA P 628 1105 0 1 777 2569 182 8 10 chrUextra 25235930 25236539 -3768117 - SAR_DM Satellite Satellite -673 799 192 1 777 720 103 0 0 chrUextra 25236443 25236560 -3768096 + ARS406_DM Unknown Unknown 1 117 -236 1 777 2510 190 11 11 chrUextra 25236660 25237272 -3767384 + SAR_DM Satellite Satellite 465 1076 -396 1 777 2612 176 14 18 chrUextra 25237390 25238020 -3766636 - SAR_DM Satellite Satellite -550 922 295 1 777 2780 173 9 9 chrUextra 25238120 25238749 -3765907 + SAR_DM Satellite Satellite 267 895 -577 1 777 1133 7 0 14 chrUextra 25238850 25238996 -3765660 - QUASIMODO_LTR LTR Gypsy -514 144 1 1 777 3797 2 0 0 chrUextra 25238996 25239480 -3765176 - QUASIMODO_I LTR Gypsy 0 6060 5577 1 777 5130 19 35 0 chrUextra 25240310 25240940 -3763716 + R1_DM LINE R1 3144 3795 -1561 1 777 5424 0 0 2 chrUextra 25241040 25241670 -3762986 - R1_DM LINE R1 -3320 2036 1408 1 777 2480 146 27 23 chrUextra 25241770 25242293 -3762363 + DMRT1B LINE R1 4633 5183 0 1 777 3889 121 3 2 chrUextra 25242500 25243130 -3761526 + S_DM DNA Tc1 918 1548 -188 1 777 1992 43 75 0 chrUextra 25243960 25244242 -3760414 + PROTOP_A DNA P 699 1001 -104 1 777 21 57 0 0 chrUextra 25244460 25244495 -3760161 + AT_rich Low_complexity Low_complexity 1 35 0 1 777 21 89 0 0 chrUextra 25244533 25244589 -3760067 + AT_rich Low_complexity Low_complexity 1 56 0 1 777 5411 2 0 0 chrUextra 25244692 25245320 -3759336 + R1_DM LINE R1 2799 3426 -1930 1 777 1744 179 17 13 chrUextra 25245420 25245466 -3759190 + SAR_DM Satellite Satellite 1 61 -1067 1 777 1086 75 0 0 chrUextra 25245466 25245627 -3759029 - ARS406_DM Unknown Unknown -164 189 29 1 777 1744 179 17 13 chrUextra 25245627 25246047 -3758609 + SAR_DM Satellite Satellite 62 630 -498 1 777 312 165 119 12 chrUextra 25246899 25247059 -3757597 + (TCTG)n Simple_repeat Simple_repeat 2 178 0 1 777 2720 168 14 11 chrUextra 25247612 25248239 -3756417 + SAR_DM Satellite Satellite 346 974 -498 1 777 34 24 0 0 chrUextra 25248367 25248408 -3756248 + AT_rich Low_complexity Low_complexity 1 41 0 1 777 21 95 0 0 chrUextra 25248621 25248684 -3755972 + AT_rich Low_complexity Low_complexity 1 63 0 1 777 1961 4 0 91 chrUextra 25248696 25248970 -3755686 + LSU-rRNA_Dme rRNA rRNA 1 249 -3651 1 777 3091 143 4 9 chrUextra 25249070 25249626 -3755030 + TAHRE LINE telomeric 9897 10449 -14 1 777 213 109 0 52 chrUextra 25249629 25249687 -3754969 + (TAAA)n Simple_repeat Simple_repeat 3 57 0 1 777 4545 2 0 0 chrUextra 25249800 25250321 -3754335 + LSU-rRNA_Dme rRNA rRNA 2061 2581 -1319 1 777 974 0 0 0 chrUextra 25250319 25250430 -3754226 + R2_DM LINE R2 2558 2668 -939 1 777 942 15 0 0 chrUextra 25250532 25250663 -3753993 + FW_DM LINE Jockey 4559 4689 -3 1 777 3584 31 58 22 chrUextra 25250659 25251159 -3753497 - ROO_I LTR Pao -4051 4205 3688 1 777 3256 87 73 32 chrUextra 25251260 25251890 -3752766 + STALKER4_I LTR Gypsy 673 1328 -5202 1 777 2767 168 32 9 chrUextra 25251990 25252620 -3752036 - SAR_DM Satellite Satellite -446 1026 383 1 777 745 170 32 19 chrUextra 25252882 25253038 -3751618 + HETRP_DM Satellite Satellite 1518 1675 -197 1 777 1363 142 107 10 chrUextra 25253045 25253343 -3751313 - HOBO DNA hAT 0 3016 2690 1 777 766 21 10 0 chrUextra 25253450 25253546 -3751110 - SSU-rRNA_Dme rRNA rRNA -1898 97 1 1 777 30 0 0 0 chrUextra 25253680 25253710 -3750946 + AT_rich Low_complexity Low_complexity 1 30 0 1 777 28 48 0 0 chrUextra 25254038 25254080 -3750576 + AT_rich Low_complexity Low_complexity 1 42 0 1 777 4978 16 5 0 chrUextra 25254180 25254810 -3749846 + ACCORD2_I LTR Gypsy 6550 7182 -30 1 777 338 229 10 20 chrUextra 25255640 25255738 -3748918 + HETRP_DM Satellite Satellite 1568 1664 -208 1 777 192 40 0 0 chrUextra 25255901 25255926 -3748730 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 777 511 193 16 16 chrUextra 25255926 25256047 -3748609 + HETRP_DM Satellite Satellite 1549 1669 -203 1 777 323 159 0 104 chrUextra 25256191 25256268 -3748388 + HETRP_DM Satellite Satellite 1518 1586 -286 1 777 823 18 0 35 chrUextra 25256371 25256484 -3748172 - NTS_DM Other Other -107 133 25 1 777 1252 18 0 6 chrUextra 25256537 25256702 -3747954 - NTS_DM Other Other -39 201 38 1 777 840 9 0 35 chrUextra 25256702 25256815 -3747841 - NTS_DM Other Other -107 133 25 1 777 22 56 0 0 chrUextra 25256841 25256877 -3747779 + AT_rich Low_complexity Low_complexity 1 36 0 1 777 255 125 0 0 chrUextra 25256890 25256930 -3747726 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 777 2705 168 16 7 chrUextra 25257103 25257709 -3746947 + SAR_DM Satellite Satellite 326 937 -535 1 777 952 71 7 0 chrUextra 25257589 25257730 -3746926 - ARS406_DM Unknown Unknown -166 187 46 1 777 1620 8 0 0 chrUextra 25257830 25258201 -3746455 + (CACAA)n Simple_repeat Simple_repeat 1 371 0 1 777 1089 86 0 0 chrUextra 25258220 25258383 -3746273 + (CACAA)n Simple_repeat Simple_repeat 2 164 0 1 777 271 243 0 0 chrUextra 25258383 25258453 -3746203 + (CACAT)n Simple_repeat Simple_repeat 5 74 0 1 777 5452 2 2 2 chrUextra 25258560 25259190 -3745466 - SSU-rRNA_Dme rRNA rRNA -686 1309 680 1 777 4984 3 0 0 chrUextra 25259290 25259874 -3744782 + ROO_I LTR Pao 6066 6649 -1607 1 777 492 17 0 0 chrUextra 25259861 25259920 -3744736 + ROO_I LTR Pao 7444 7502 -754 1 777 2900 166 11 8 chrUextra 25260020 25260650 -3744006 + SAR_DM Satellite Satellite 371 1002 -470 1 777 1064 19 24 24 chrUextra 25261480 25261645 -3743011 + NTS_DM Other Other 76 240 0 1 777 1734 21 17 17 chrUextra 25261645 25261885 -3742771 + NTS_DM Other Other 1 240 0 1 777 1680 14 13 18 chrUextra 25261885 25262110 -3742546 + NTS_DM Other Other 1 224 -16 1 777 5304 9 0 2 chrUextra 25262210 25262839 -3741817 + R1_DM LINE R1 1887 2514 -2842 1 777 4994 30 0 0 chrUextra 25262939 25263567 -3741089 + MDG1_I LTR Gypsy 2278 2905 -3691 1 777 2404 196 6 24 chrUextra 25263668 25264295 -3740361 + SAR_DM Satellite Satellite 498 1113 -359 1 777 2321 102 11 25 chrUextra 25264408 25265026 -3739630 - DMSAT6 Satellite Satellite 0 609 1 1 777 5249 2 2 0 chrUextra 25265154 25265755 -3738901 - LSU-rRNA_Dme rRNA rRNA 0 3900 3299 1 777 5136 24 2 0 chrUextra 25266584 25267213 -3737443 - ROO_I LTR Pao -5520 2736 2107 1 777 2671 170 14 13 chrUextra 25267313 25267940 -3736716 - SAR_DM Satellite Satellite -503 969 342 1 777 5248 5 2 3 chrUextra 25268042 25268671 -3735985 + R1_DM LINE R1 3512 4139 -1217 1 777 2603 179 12 8 chrUextra 25268771 25269372 -3735284 - SAR_DM Satellite Satellite -675 797 195 1 777 691 124 0 0 chrUextra 25269279 25269400 -3735256 + ARS406_DM Unknown Unknown 1 121 -232 1 777 3940 32 12 0 chrUextra 25269500 25270002 -3734654 + FW_DM LINE Jockey 4185 4692 0 1 777 951 71 0 0 chrUextra 25270003 25270129 -3734527 - R1_DM LINE R1 -3963 1393 1268 1 777 4400 2 2 0 chrUextra 25270958 25271465 -3733191 - LSU-rRNA_Dme rRNA rRNA -1605 2295 1788 1 777 620 13 0 13 chrUextra 25271509 25271587 -3733069 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1712 1 777 2799 175 13 8 chrUextra 25271687 25272315 -3732341 + SAR_DM Satellite Satellite 299 929 -543 1 777 26 30 0 0 chrUextra 25272734 25272767 -3731889 + AT_rich Low_complexity Low_complexity 1 33 0 1 777 23 68 0 0 chrUextra 25272813 25272857 -3731799 + AT_rich Low_complexity Low_complexity 1 44 0 1 777 21 89 0 0 chrUextra 25272892 25272948 -3731708 + AT_rich Low_complexity Low_complexity 1 56 0 1 777 5051 32 13 0 chrUextra 25273145 25273774 -3730882 - R1_DM LINE R1 -3343 2013 1377 1 777 2723 185 8 5 chrUextra 25273874 25274503 -3730153 + SAR_DM Satellite Satellite 220 850 -622 1 777 1760 9 17 17 chrUextra 25275332 25275564 -3729092 - NTS_DM Other Other -8 232 1 1 777 1734 21 17 17 chrUextra 25275564 25275804 -3728852 - NTS_DM Other Other 0 240 1 1 777 991 20 25 25 chrUextra 25275804 25275961 -3728695 - NTS_DM Other Other 0 240 84 1 777 4962 13 2 0 chrUextra 25276061 25276690 -3727966 - PROTOP_A DNA P -240 865 236 1 777 291 216 135 91 chrUextra 25276803 25277120 -3727536 + Gypsy12A_LTR LTR Gypsy 1395 1727 -553 1 777 1859 55 18 35 chrUextra 25277134 25277419 -3727237 + Gypsy12_I LTR Gypsy 1 280 -5266 1 777 3011 158 11 11 chrUextra 25277520 25278148 -3726508 - SAR_DM Satellite Satellite -428 1044 417 1 777 5395 2 2 3 chrUextra 25278248 25278877 -3725779 - SSU-rRNA_Dme rRNA rRNA -635 1360 733 1 777 488 119 36 0 chrUextra 25279029 25279113 -3725543 - NTS_DM Other Other -150 90 4 1 777 1264 19 0 18 chrUextra 25279223 25279388 -3725268 - NTS_DM Other Other -78 162 1 1 777 1632 9 18 14 chrUextra 25279388 25279606 -3725050 - NTS_DM Other Other 0 240 22 1 777 5120 16 2 0 chrUextra 25279706 25280334 -3724322 + STALKER4_I LTR Gypsy 2499 3127 -3403 1 777 5374 0 3 2 chrUextra 25280438 25281060 -3723596 - SSU-rRNA_Dme rRNA rRNA -70 1925 1303 1 777 5147 9 3 0 chrUextra 25281164 25281793 -3722863 + STALKER4_I LTR Gypsy 1303 1933 -4597 1 777 2791 181 10 6 chrUextra 25281898 25282522 -3722134 - SAR_DM Satellite Satellite -543 929 304 1 777 2288 89 29 46 chrUextra 25282659 25283251 -3721405 - DMSAT6 Satellite Satellite -3 581 1 1 777 2939 35 3 0 chrUextra 25283351 25283724 -3720932 - R1_DM LINE R1 -424 4932 4559 1 777 2076 23 0 0 chrUextra 25283722 25283980 -3720676 - R1_DM LINE R1 -1270 4086 3829 1 777 4165 88 3 0 chrUextra 25284080 25284708 -3719948 + STALKER4_I LTR Gypsy 5596 6225 -305 1 777 5414 2 0 0 chrUextra 25284809 25285438 -3719218 - ROO_I LTR Pao -2662 5594 4966 1 777 4027 4 0 0 chrUextra 25285538 25286007 -3718649 + DMRT1B LINE R1 4414 4882 -301 1 777 1440 0 0 0 chrUextra 25286007 25286167 -3718489 + (CACAA)n Simple_repeat Simple_repeat 1 160 0 1 777 2367 118 21 6 chrUextra 25286996 25287625 -3717031 - DMSAT6 Satellite Satellite -71 638 1 1 777 2279 106 14 9 chrUextra 25287725 25288354 -3716302 - DMSAT6 Satellite Satellite -112 632 1 1 777 246 150 0 0 chrUextra 25288525 25288565 -3716091 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 777 246 150 0 0 chrUextra 25288711 25288751 -3715905 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 777 22 56 0 0 chrUextra 25288756 25288792 -3715864 + AT_rich Low_complexity Low_complexity 1 36 0 1 777 1920 0 0 0 chrUextra 25288864 25289083 -3715573 - LSU-rRNA_Dme rRNA rRNA 0 3900 3682 1 777 259 161 18 18 chrUextra 25289278 25289335 -3715321 - Gypsy8_LTR LTR Gypsy -1 303 247 1 777 23 0 0 0 chrUextra 25289787 25289810 -3714846 + AT_rich Low_complexity Low_complexity 1 23 0 1 777 2712 176 10 11 chrUextra 25289920 25290541 -3714115 - SAR_DM Satellite Satellite -569 903 284 1 777 246 150 0 0 chrUextra 25290660 25290700 -3713956 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 777 246 150 0 0 chrUextra 25290752 25290792 -3713864 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 777 246 150 0 0 chrUextra 25290844 25290884 -3713772 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 777 255 125 0 0 chrUextra 25290927 25290967 -3713689 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 777 22 56 0 0 chrUextra 25290980 25291016 -3713640 + AT_rich Low_complexity Low_complexity 1 36 0 1 777 857 18 0 27 chrUextra 25291042 25291154 -3713502 + NTS_DM Other Other 25 133 -107 1 777 912 17 0 0 chrUextra 25291154 25291270 -3713386 + NTS_DM Other Other 38 153 -87 1 777 636 14 0 0 chrUextra 25291370 25291443 -3713213 + (TTGTG)n Simple_repeat Simple_repeat 3 75 0 1 777 999 98 6 0 chrUextra 25292099 25292263 -3712393 - ARS406_DM Unknown Unknown -188 165 1 1 777 798 184 15 19 chrUextra 25292100 25292305 -3712351 + SAR_DM Satellite Satellite 841 1044 -428 1 777 1825 167 12 12 chrUextra 25292321 25292727 -3711929 + SAR_DM Satellite Satellite 603 1008 -464 1 777 2148 118 11 35 chrUextra 25292830 25293457 -3711199 - DMSAT6 Satellite Satellite -28 612 1 1 777 2755 181 8 6 chrUextra 25293557 25294180 -3710476 - SAR_DM Satellite Satellite -603 869 246 1 777 287 87 0 0 chrUextra 25294140 25294186 -3710470 + ARS406_DM Unknown Unknown 1 46 -307 1 777 1103 89 40 13 chrUextra 25294286 25294541 -3710115 - Invader2_I LTR Gypsy -846 3746 3419 1 777 2860 32 8 3 chrUextra 25294541 25294915 -3709741 + IDEFIX_LTR LTR Gypsy 1 376 -218 1 777 3397 0 0 3 chrUextra 25295015 25295406 -3709250 + LSU-rRNA_Dme rRNA rRNA 3511 3900 0 1 777 22 56 0 0 chrUextra 25295478 25295514 -3709142 + AT_rich Low_complexity Low_complexity 1 36 0 1 777 246 150 0 0 chrUextra 25295519 25295559 -3709097 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 777 5383 6 0 0 chrUextra 25295744 25296373 -3708283 - R1_DM LINE R1 -302 5054 4426 1 777 784 0 10 0 chrUextra 25296474 25296570 -3708086 + QUASIMODO_LTR LTR Gypsy 562 658 0 1 97 1136 250 33 26 chrUextra 25296649 25297076 -3707580 - FROGGER_I LTR Copia -86 1991 1562 1 778 5015 16 27 21 chrUextra 25297202 25297831 -3706825 - Gypsy6_I LTR Gypsy -1078 5934 5302 1 778 5355 8 3 0 chrUextra 25297931 25298560 -3706096 - Invader4_I LTR Gypsy -1304 1109 479 1 778 869 0 0 9 chrUextra 25298660 25298765 -3705891 + 5S_DM RNA RNA 32 135 0 1 778 1112 8 8 0 chrUextra 25299006 25299140 -3705516 + 5S_DM RNA RNA 1 135 0 1 778 3509 10 0 0 chrUextra 25299389 25299806 -3704850 + DM176_LTR LTR Gypsy 91 507 0 1 778 1660 5 0 5 chrUextra 25299817 25300018 -3704638 + DM176_LTR LTR Gypsy 1 200 -307 1 778 695 0 11 11 chrUextra 25300118 25300207 -3704449 + LSU-rRNA_Dme rRNA rRNA 1700 1788 -2112 1 778 4326 2 0 0 chrUextra 25300251 25300747 -3703909 + LSU-rRNA_Dme rRNA rRNA 1788 2283 -1617 1 778 2547 211 9 7 chrUextra 25300847 25301409 -3703247 - Gypsy_I LTR Gypsy -5493 1014 452 1 778 300 0 0 0 chrUextra 25301441 25301476 -3703180 - BS2 LINE Jockey -1105 3616 3582 1 778 4967 2 5 7 chrUextra 25301576 25302175 -3702481 + LSU-rRNA_Dme rRNA rRNA 1191 1788 -2112 1 778 4680 11 145 0 chrUextra 25302305 25302934 -3701722 - DOC2_DM LINE Jockey -873 3920 3201 1 778 1173 44 6 12 chrUextra 25303320 25303480 -3701176 - DIVER2_LTR LTR Pao 0 385 227 1 778 1620 0 0 3 chrUextra 25303763 25304145 -3700511 + (TATAA)n Simple_repeat Simple_repeat 1 381 0 1 778 2077 0 0 0 chrUextra 25304147 25304392 -3700264 - FW_DM LINE Jockey -2 4690 4446 1 778 996 123 0 0 chrUextra 25304492 25304647 -3700009 + (TA)n Simple_repeat Simple_repeat 1 155 0 1 778 3330 5 7 10 chrUextra 25304647 25305061 -3699595 + DM297_LTR LTR Gypsy 2 414 0 1 778 472 17 0 0 chrUextra 25305061 25305121 -3699535 + DM297_I LTR Gypsy 1 60 -6107 1 778 371 21 0 0 chrUextra 25305221 25305268 -3699388 + R1_DM LINE R1 5310 5356 0 1 778 3797 66 9 4 chrUextra 25305300 25305850 -3698806 + R1_DM LINE R1 1 602 -4754 1 778 4300 37 32 0 chrUextra 25305950 25306579 -3698077 - DOC2_DM LINE Jockey -3983 810 124 1 778 930 83 0 18 chrUextra 25306679 25306850 -3697806 + (CAAGA)n Simple_repeat Simple_repeat 5 172 0 1 778 1620 12 0 53 chrUextra 25306852 25307308 -3697348 + (CACGA)n Simple_repeat Simple_repeat 1 431 0 1 778 2314 92 21 36 chrUextra 25307416 25308037 -3696619 - DMSAT6 Satellite Satellite -3 611 1 1 778 21 0 0 0 chrUextra 25308357 25308378 -3696278 + AT_rich Low_complexity Low_complexity 1 21 0 1 778 42 57 0 0 chrUextra 25308552 25308622 -3696034 + AT_rich Low_complexity Low_complexity 1 70 0 1 778 513 81 0 11 chrUextra 25310324 25310411 -3694245 + MDG1_I LTR Gypsy 6119 6204 -392 1 778 588 81 28 183 chrUextra 25310404 25310657 -3693999 + MDG1_I LTR Gypsy 6395 6799 -98 1 778 1461 38 3 0 chrUextra 25310661 25310953 -3693703 + (TAA)n Simple_repeat Simple_repeat 1 292 0 1 778 264 330 0 16 chrUextra 25312150 25312332 -3692324 + (CTG)n Simple_repeat Simple_repeat 2 180 0 1 778 2890 168 8 3 chrUextra 25312516 25313130 -3691526 + SAR_DM Satellite Satellite 321 937 -535 1 778 880 83 6 22 chrUextra 25314698 25315326 -3689330 + RSP Satellite Satellite 1 618 0 1 778 1620 5 0 2 chrUextra 25315431 25315842 -3688814 + (GAGAA)n Simple_repeat Simple_repeat 1 410 0 1 778 661 185 6 50 chrUextra 25316307 25316466 -3688190 + HETRP_DM Satellite Satellite 1518 1669 -203 1 778 668 179 7 14 chrUextra 25316610 25316752 -3687904 + HETRP_DM Satellite Satellite 1529 1669 -203 1 778 2827 178 10 5 chrUextra 25316887 25317514 -3687142 - SAR_DM Satellite Satellite -593 879 250 1 778 2680 181 7 8 chrUextra 25317633 25318242 -3686414 - SAR_DM Satellite Satellite -396 1076 469 1 778 5283 0 3 2 chrUextra 25318344 25318972 -3685684 - ROO_I LTR Pao -3885 4371 3743 1 778 549 0 0 0 chrUextra 25319073 25319134 -3685522 + (TAA)n Simple_repeat Simple_repeat 2 62 0 1 778 1672 5 0 0 chrUextra 25319134 25319332 -3685324 - Copia2_LTR_DM LTR Copia 0 198 1 1 778 3053 8 0 0 chrUextra 25319332 25319701 -3684955 - Copia2_I LTR Copia 0 4162 3794 1 778 1756 17 17 17 chrUextra 25319801 25320041 -3684615 + NTS_DM Other Other 1 240 0 1 778 1734 21 17 17 chrUextra 25320041 25320281 -3684375 + NTS_DM Other Other 1 240 0 1 778 1204 14 0 0 chrUextra 25320281 25320428 -3684228 + NTS_DM Other Other 1 147 -93 1 778 1179 7 0 0 chrUextra 25320530 25320670 -3683986 - NTS_DM Other Other -100 140 1 1 778 1710 25 17 17 chrUextra 25320670 25320910 -3683746 - NTS_DM Other Other 0 240 1 1 778 1731 21 17 17 chrUextra 25320910 25321150 -3683506 - NTS_DM Other Other 0 240 1 1 778 690 0 0 0 chrUextra 25321258 25321337 -3683319 - DM297_LTR LTR Gypsy -335 79 1 1 778 4087 2 0 2 chrUextra 25321417 25321886 -3682770 + SSU-rRNA_Dme rRNA rRNA 1 468 -1527 1 778 4022 2 10 0 chrUextra 25321986 25322468 -3682188 - QUASIMODO_LTR LTR Gypsy -171 487 1 1 778 4025 30 0 0 chrUextra 25322839 25323342 -3681314 - PROTOP_A DNA P 0 1105 603 1 778 2433 169 40 32 chrUextra 25323442 25324066 -3680590 + SAR_DM Satellite Satellite 267 895 -577 1 778 2756 178 10 8 chrUextra 25324171 25324794 -3679862 + SAR_DM Satellite Satellite 424 1047 -425 1 778 22 70 0 0 chrUextra 25325011 25325054 -3679602 + AT_rich Low_complexity Low_complexity 1 43 0 1 778 1003 101 252 0 chrUextra 25325146 25325403 -3679253 + DNAREP1_DM LINE Penelope 273 594 0 1 778 459 0 0 0 chrUextra 25326931 25326982 -3677674 + (TTCTC)n Simple_repeat Simple_repeat 2 52 0 1 778 3714 7 2 2 chrUextra 25327082 25327518 -3677138 - R2_DM LINE R2 -3169 438 3 1 778 1253 0 0 0 chrUextra 25327568 25327710 -3676946 - LSU-rRNA_Dme rRNA rRNA -1323 2577 2436 1 778 331 291 28 21 chrUextra 25327810 25327954 -3676702 + Invader3_I LTR Gypsy 3066 3210 -1678 1 778 635 295 10 29 chrUextra 25328119 25328433 -3676223 + MDG3_I LTR Gypsy 3332 3639 -1347 1 778 880 74 3 20 chrUextra 25328545 25329166 -3675490 + RSP Satellite Satellite 1 610 0 1 778 280 29 0 0 chrUextra 25329994 25330029 -3674627 + SSU-rRNA_Dme rRNA rRNA 1961 1995 0 1 778 5486 2 0 0 chrUextra 25331450 25332078 -3672578 - SSU-rRNA_Dme rRNA rRNA -814 1181 554 1 778 4817 0 0 45 chrUextra 25332178 25332806 -3671850 + LSU-rRNA_Dme rRNA rRNA 175 774 -3126 1 778 5192 24 0 0 chrUextra 25332906 25333534 -3671122 - FW_DM LINE Jockey -774 3918 3291 1 778 2300 175 4 4 chrUextra 25333634 25334248 -3670408 + BATUMI_I LTR Pao 4043 4732 -3182 1 778 3154 7 0 9 chrUextra 25334362 25334787 -3669869 + HMSBEAGLE_I LTR Gypsy 376 796 -5733 1 778 974 29 52 12 chrUextra 25334787 25334959 -3669697 + (TTA)n Simple_repeat Simple_repeat 1 179 0 1 778 260 0 0 0 chrUextra 25334959 25334990 -3669666 + HMSBEAGLE_I LTR Gypsy 969 999 -5530 1 778 35 71 0 0 chrUextra 25335200 25335270 -3669386 + AT_rich Low_complexity Low_complexity 1 70 0 1 778 280 178 203 79 chrUextra 25335388 25335565 -3669091 + DNAREP1_DM LINE Penelope 16 214 -380 1 778 644 168 27 14 chrUextra 25335549 25335713 -3668943 - DNAREP1_DM LINE Penelope -262 332 117 1 778 476 240 0 8 chrUextra 25335957 25336079 -3668577 - HETRP_DM Satellite Satellite -203 1669 1549 1 778 210 37 0 0 chrUextra 25336079 25336106 -3668550 + (TC)n Simple_repeat Simple_repeat 2 28 0 1 778 1895 5 5 0 chrUextra 25336224 25336446 -3668210 + Invader1_LTR LTR Gypsy 1 223 -200 1 778 4533 39 44 5 chrUextra 25336577 25337174 -3667482 + DMCR1A LINE CR1 1082 1701 -2769 1 778 3928 14 0 2 chrUextra 25337274 25337759 -3666897 - BATUMI_I LTR Pao -177 7786 7303 1 778 877 50 8 0 chrUextra 25337782 25337902 -3666754 + BATUMI_I LTR Pao 6427 6547 -1416 1 778 1479 0 6 0 chrUextra 25338002 25338182 -3666474 - NTS_DM Other Other -59 181 1 1 778 1815 8 17 13 chrUextra 25338182 25338421 -3666235 - NTS_DM Other Other 0 240 1 1 778 1429 20 19 24 chrUextra 25338421 25338630 -3666026 - NTS_DM Other Other 0 240 33 1 778 3291 12 52 2 chrUextra 25338730 25339156 -3665500 - IDEFIX_LTR LTR Gypsy -147 447 1 1 778 1635 5 0 5 chrUextra 25339156 25339358 -3665298 - IDEFIX_I LTR Gypsy 0 5628 5428 1 778 2766 161 19 10 chrUextra 25339465 25340084 -3664572 - SAR_DM Satellite Satellite -502 970 346 1 778 5086 25 13 0 chrUextra 25340186 25340814 -3663842 + R1_DM LINE R1 1724 2359 -2997 1 778 1026 69 0 0 chrUextra 25340914 25341058 -3663598 - R1_DM LINE R1 -4575 781 638 1 778 1208 60 6 0 chrUextra 25341056 25341223 -3663433 - R1_DM LINE R1 -5188 168 1 1 778 934 35 0 0 chrUextra 25341256 25341370 -3663286 - R1_DM LINE R1 0 5356 5243 1 778 1393 6 0 0 chrUextra 25341367 25341534 -3663122 - R1_DM LINE R1 -290 5066 4900 1 778 788 149 50 46 chrUextra 25341642 25341860 -3662796 + Stalker2_I LTR Gypsy 675 893 -6509 1 778 221 0 0 33 chrUextra 25342370 25342400 -3662256 + (CAAGA)n Simple_repeat Simple_repeat 1 29 0 1 778 1587 3 0 0 chrUextra 25342412 25342735 -3661921 + (CAAGA)n Simple_repeat Simple_repeat 1 323 0 1 778 254 136 0 22 chrUextra 25343124 25343169 -3661487 + LSU-rRNA_Dme rRNA rRNA 2581 2624 -1276 1 778 246 150 0 0 chrUextra 25343216 25343256 -3661400 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 778 255 125 0 0 chrUextra 25343299 25343339 -3661317 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 778 22 56 0 0 chrUextra 25343352 25343388 -3661268 + AT_rich Low_complexity Low_complexity 1 36 0 1 778 870 9 0 27 chrUextra 25343414 25343526 -3661130 + NTS_DM Other Other 25 133 -107 1 778 1252 18 0 6 chrUextra 25343526 25343691 -3660965 + NTS_DM Other Other 38 201 -39 1 778 4998 21 64 2 chrUextra 25344554 25345182 -3659474 + R1_DM LINE R1 1528 2194 -3162 1 778 1015 7 27 20 chrUextra 25345282 25345430 -3659226 + NTS_DM Other Other 92 240 0 1 778 1260 6 0 24 chrUextra 25345430 25345596 -3659060 + NTS_DM Other Other 1 162 -78 1 778 450 121 48 0 chrUextra 25345706 25345789 -3658867 + NTS_DM Other Other 4 90 -150 1 778 4962 30 3 2 chrUextra 25346010 25346638 -3658018 + NINJA_I LTR Pao 4012 4640 -1371 1 778 2470 86 11 29 chrUextra 25346738 25347366 -3657290 + DMSAT6 Satellite Satellite 1 617 -280 1 778 2617 184 10 11 chrUextra 25347466 25348088 -3656568 - SAR_DM Satellite Satellite -657 815 195 1 778 2374 171 60 13 chrUextra 25348201 25348822 -3655834 - SAR_DM Satellite Satellite -524 948 299 1 778 2504 177 16 18 chrUextra 25348922 25349533 -3655123 + SAR_DM Satellite Satellite 467 1076 -396 1 778 689 12 0 34 chrUextra 25349651 25349740 -3654916 - NTS_DM Other Other -130 110 25 1 778 1252 18 0 6 chrUextra 25349792 25349957 -3654699 - NTS_DM Other Other -39 201 38 1 778 870 9 0 27 chrUextra 25349957 25350069 -3654587 - NTS_DM Other Other -107 133 25 1 778 22 56 0 0 chrUextra 25350095 25350131 -3654525 + AT_rich Low_complexity Low_complexity 1 36 0 1 778 225 125 0 24 chrUextra 25350144 25350185 -3654471 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 778 2928 170 6 8 chrUextra 25350378 25351006 -3653650 + SAR_DM Satellite Satellite 411 1037 -435 1 778 4869 29 37 3 chrUextra 25351834 25352462 -3652194 + NINJA_I LTR Pao 1085 1733 -4278 1 778 992 32 0 146 chrUextra 25352563 25352745 -3651911 - BATUMI_I LTR Pao -807 7156 7002 1 778 3768 0 0 5 chrUextra 25352745 25353190 -3651466 - BATUMI_I LTR Pao 0 7963 7521 1 778 2780 183 8 6 chrUextra 25353290 25353918 -3650738 + SAR_DM Satellite Satellite 401 1029 -443 1 778 2264 85 3 41 chrUextra 25354018 25354646 -3650010 - DMSAT6 Satellite Satellite -84 604 1 1 778 1645 72 8 0 chrUextra 25354746 25354982 -3649674 - R1_DM LINE R1 -5118 238 1 1 778 3022 17 0 0 chrUextra 25355015 25355374 -3649282 - R1_DM LINE R1 0 5356 4998 1 778 2717 214 23 14 chrUextra 25355474 25356828 -3647828 + SAR_DM Satellite Satellite 1 1366 -514 1 778 1315 198 14 0 chrUextra 25357658 25357946 -3646710 - STALKER4_I LTR Gypsy -6004 526 235 1 778 31 58 0 0 chrUextra 25357947 25357999 -3646657 + AT_rich Low_complexity Low_complexity 1 52 0 1 778 1101 97 3 34 chrUextra 25358087 25358286 -3646370 - STALKER4_LTR LTR Gypsy -3 399 241 1 778 1620 0 0 0 chrUextra 25358805 25359011 -3645645 + (TAGA)n Simple_repeat Simple_repeat 1 206 0 1 778 2681 181 6 8 chrUextra 25359114 25359742 -3644914 - SAR_DM Satellite Satellite -641 831 205 1 778 192 40 0 0 chrUextra 25359909 25359934 -3644722 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 778 477 217 8 16 chrUextra 25359934 25360056 -3644600 + HETRP_DM Satellite Satellite 1549 1669 -203 1 778 659 180 13 51 chrUextra 25360200 25360358 -3644298 + HETRP_DM Satellite Satellite 1518 1669 -203 1 778 2735 178 27 8 chrUextra 25360570 25361198 -3643458 - SAR_DM Satellite Satellite -442 1030 391 1 778 2906 225 16 39 chrUextra 25361298 25362654 -3642002 + SAR_DM Satellite Satellite 1 1325 -569 1 778 25 0 0 0 chrUextra 25362781 25362806 -3641850 + AT_rich Low_complexity Low_complexity 1 25 0 1 778 21 0 0 0 chrUextra 25363178 25363199 -3641457 + AT_rich Low_complexity Low_complexity 1 21 0 1 778 4422 58 32 10 chrUextra 25363482 25364110 -3640546 + MDG1_I LTR Gypsy 90 731 -5865 1 778 2884 175 5 10 chrUextra 25364210 25364838 -3639818 + SAR_DM Satellite Satellite 409 1033 -439 1 778 1088 6 25 19 chrUextra 25364938 25365097 -3639559 + NTS_DM Other Other 81 240 0 1 778 1847 4 17 13 chrUextra 25365097 25365336 -3639320 + NTS_DM Other Other 1 240 0 1 778 1713 9 17 17 chrUextra 25365336 25365566 -3639090 + NTS_DM Other Other 1 230 -10 1 778 4927 38 5 3 chrUextra 25365667 25366294 -3638362 + R1_DM LINE R1 1305 1932 -3424 1 778 3581 7 0 54 chrUextra 25366394 25366858 -3637798 - LSU-rRNA_Dme rRNA rRNA -3461 439 1 1 778 21 95 0 0 chrUextra 25366870 25366933 -3637723 + AT_rich Low_complexity Low_complexity 1 63 0 1 778 2366 86 22 38 chrUextra 25367122 25367750 -3636906 + DMSAT6 Satellite Satellite 1 617 -97 1 778 2139 174 41 8 chrUextra 25367850 25368461 -3636195 - SAR_DM Satellite Satellite -837 630 1 1 778 2857 171 7 5 chrUextra 25369317 25369928 -3634728 + SAR_DM Satellite Satellite 326 937 -535 1 778 555 66 0 0 chrUextra 25370034 25370110 -3634546 + (TTCTC)n Simple_repeat Simple_repeat 5 80 0 1 778 4337 60 37 13 chrUextra 25370762 25371390 -3633266 - R1_DM LINE R1 -4562 794 152 1 778 5449 3 0 0 chrUextra 25371490 25372118 -3632538 - HETA LINE telomeric -4100 1981 1354 1 778 5504 2 0 0 chrUextra 25372218 25372846 -3631810 + LSU-rRNA_Dme rRNA rRNA 2786 3413 -487 1 778 2449 192 8 8 chrUextra 25372946 25373551 -3631105 - SAR_DM Satellite Satellite -673 799 195 1 778 727 103 0 0 chrUextra 25373458 25373574 -3631082 + ARS406_DM Unknown Unknown 1 116 -237 1 778 5200 24 2 0 chrUextra 25373674 25374302 -3630354 - R2_DM LINE R2 -632 2975 2347 1 778 4386 2 6 8 chrUextra 25374402 25374935 -3629721 + LSU-rRNA_Dme rRNA rRNA 1257 1788 -2112 1 778 444 0 0 0 chrUextra 25374979 25375030 -3629626 + LSU-rRNA_Dme rRNA rRNA 1788 1838 -2062 1 778 4718 2 6 0 chrUextra 25375858 25376405 -3628251 - SSU-rRNA_Dme rRNA rRNA -1445 550 1 1 778 3508 208 16 30 chrUextra 25377314 25378668 -3625988 - SAR_DM Satellite Satellite -852 1336 1 1 778 5200 6 8 0 chrUextra 25378770 25379398 -3625258 + DM176_I LTR Gypsy 740 1372 -5048 1 778 210 114 0 43 chrUextra 25379755 25379801 -3624855 + (AGTAG)n Simple_repeat Simple_repeat 4 47 0 1 778 1356 68 0 3 chrUextra 25379808 25380120 -3624536 + (GAGAA)n Simple_repeat Simple_repeat 1 311 0 1 778 2438 189 34 21 chrUextra 25380225 25380851 -3623805 + SAR_DM Satellite Satellite 262 895 -577 1 778 5302 10 0 0 chrUextra 25380952 25381579 -3623077 - STALKER4_I LTR Gypsy -4200 2330 1704 1 778 2837 125 50 26 chrUextra 25381679 25382303 -3622353 - TART LINE telomeric -4690 9787 9149 1 778 5062 22 3 2 chrUextra 25382406 25383033 -3621623 - R1_DM LINE R1 -1137 4219 3592 1 778 5208 14 0 0 chrUextra 25383133 25383760 -3620896 - DMRT1B LINE R1 -1994 3189 2563 1 778 5254 5 0 0 chrUextra 25383861 25384487 -3620169 + G6_DM LINE Jockey 33 658 -1384 1 778 368 0 0 0 chrUextra 25384587 25384636 -3620020 + NTS_DM Other Other 85 133 -107 1 778 1222 18 0 12 chrUextra 25384636 25384802 -3619854 + NTS_DM Other Other 38 201 -39 1 778 870 9 0 27 chrUextra 25384854 25384966 -3619690 + NTS_DM Other Other 25 133 -107 1 778 1252 18 0 6 chrUextra 25384966 25385131 -3619525 + NTS_DM Other Other 38 201 -39 1 778 21 57 0 0 chrUextra 25385131 25385166 -3619490 + AT_rich Low_complexity Low_complexity 1 35 0 1 778 3956 42 98 42 chrUextra 25385327 25385941 -3618715 - TRANSIB2 DNA Transib -624 2220 1573 1 778 1721 5 14 0 chrUextra 25386047 25386259 -3618397 - NTS_DM Other Other -25 215 1 1 778 1850 4 17 13 chrUextra 25386259 25386498 -3618158 - NTS_DM Other Other 0 240 1 1 778 1056 24 24 29 chrUextra 25386498 25386668 -3617988 - NTS_DM Other Other 0 240 72 1 778 1284 31 0 0 chrUextra 25386768 25386929 -3617727 + (GAGAA)n Simple_repeat Simple_repeat 4 164 0 1 778 453 16 0 15 chrUextra 25387495 25387560 -3617096 + NTS_DM Other Other 70 133 -107 1 778 1197 24 0 12 chrUextra 25387560 25387726 -3616930 + NTS_DM Other Other 38 201 -39 1 778 870 9 0 27 chrUextra 25387778 25387890 -3616766 + NTS_DM Other Other 25 133 -107 1 778 1252 18 0 6 chrUextra 25387890 25388055 -3616601 + NTS_DM Other Other 38 201 -39 1 778 21 57 0 0 chrUextra 25388055 25388090 -3616566 + AT_rich Low_complexity Low_complexity 1 35 0 1 778 632 155 0 8 chrUextra 25388222 25388339 -3616317 - ARS406_DM Unknown Unknown -237 116 1 1 778 2455 209 13 10 chrUextra 25388241 25388849 -3615807 + SAR_DM Satellite Satellite 191 800 -672 1 778 5400 24 2 3 chrUextra 25388949 25389576 -3615080 + R1_DM LINE R1 4333 4958 -398 1 778 1149 65 0 0 chrUextra 25390132 25390300 -3614356 + (TTCTC)n Simple_repeat Simple_repeat 4 171 0 1 778 5559 8 0 0 chrUextra 25390403 25391030 -3613626 + NINJA_I LTR Pao 746 1372 -4639 1 778 742 111 8 16 chrUextra 25391130 25391258 -3613398 - ARS406_DM Unknown Unknown -226 127 1 1 778 2729 182 15 11 chrUextra 25391150 25391757 -3612899 + SAR_DM Satellite Satellite 180 788 -684 1 778 2598 181 53 13 chrUextra 25391862 25392484 -3612172 - SAR_DM Satellite Satellite -354 1118 472 1 778 1799 187 6 6 chrUextra 25392585 25393210 -3611446 + SAR_DM Satellite Satellite 1 625 -545 1 778 5566 27 0 0 chrUextra 25393311 25393938 -3610718 + DIVER_I LTR Pao 2139 2765 -2878 1 778 3088 170 13 10 chrUextra 25394041 25394665 -3609991 + SAR_DM Satellite Satellite 332 957 -515 1 778 4137 4 0 0 chrUextra 25394765 25395218 -3609438 - R1_DM LINE R1 -104 5252 4800 1 778 1699 11 0 0 chrUextra 25395207 25395392 -3609264 - LSU-rRNA_Dme rRNA rRNA -1256 2644 2460 1 778 384 191 0 21 chrUextra 25395492 25395588 -3609068 + XDMR_DM Unknown Unknown 267 360 0 1 778 2726 177 15 23 chrUextra 25395502 25396119 -3608537 - SAR_DM Satellite Satellite -353 1119 508 1 778 28 79 0 0 chrUextra 25396595 25396658 -3607998 + AT_rich Low_complexity Low_complexity 1 63 0 1 778 23 68 0 0 chrUextra 25396689 25396733 -3607923 + AT_rich Low_complexity Low_complexity 1 44 0 1 778 26 30 0 0 chrUextra 25396779 25396812 -3607844 + AT_rich Low_complexity Low_complexity 1 33 0 1 778 2028 188 73 37 chrUextra 25396946 25397573 -3607083 - SAR_DM Satellite Satellite -558 649 1 1 778 222 151 13 27 chrUextra 25398754 25398829 -3605827 + (TAAA)n Simple_repeat Simple_repeat 4 77 0 1 778 22 94 0 0 chrUextra 25399262 25399326 -3605330 + AT_rich Low_complexity Low_complexity 1 64 0 1 778 3446 0 0 60 chrUextra 25399338 25399754 -3604902 + LSU-rRNA_Dme rRNA rRNA 1 391 -3509 1 778 2518 201 89 14 chrUextra 25400581 25401208 -3603448 + TAHRE LINE telomeric 391 1064 -9399 1 778 5503 18 0 2 chrUextra 25402035 25402662 -3601994 - R1_DM LINE R1 -3041 2315 1690 1 778 5084 23 5 19 chrUextra 25402762 25403389 -3601267 + IVK_DM LINE I 1387 2004 -3398 1 778 82 104 0 0 chrUextra 25403491 25403790 -3600866 + AT_rich Low_complexity Low_complexity 1 299 0 1 778 2112 222 12 8 chrUextra 25404219 25404843 -3599813 + G6_DM LINE Jockey 829 1426 -616 1 778 5535 2 2 0 chrUextra 25404944 25405570 -3599086 + G_DM LINE Jockey 1995 2621 -1725 1 778 406 311 49 20 chrUextra 25405707 25405953 -3598703 - Copia2_I LTR Copia -1458 2704 2452 1 778 522 0 0 0 chrUextra 25406397 25406455 -3598201 + (TCTA)n Simple_repeat Simple_repeat 1 58 0 1 778 5671 2 0 2 chrUextra 25407124 25407751 -3596905 - R1_DM LINE R1 -3126 2230 1605 1 778 1620 29 0 0 chrUextra 25407852 25408477 -3596179 + (TCTTG)n Simple_repeat Simple_repeat 1 625 0 1 778 2572 100 27 19 chrUextra 25408613 25409205 -3595451 + DMSAT6 Satellite Satellite 1 596 0 1 778 2410 62 0 78 chrUextra 25409322 25409669 -3594987 - CIRCE LINE Composite -5064 1292 973 1 778 1085 16 0 0 chrUextra 25409811 25409932 -3594724 - CIRCE LINE Composite -5386 970 850 1 778 4430 2 4 0 chrUextra 25410032 25410511 -3594145 - SSU-rRNA_Dme rRNA rRNA -1514 481 1 1 778 349 158 56 112 chrUextra 25411278 25411385 -3593271 - Copia_I LTR Copia -80 4513 4413 1 778 5446 2 3 3 chrUextra 25411486 25412113 -3592543 + R1_DM LINE R1 606 1232 -4124 1 778 2608 193 42 8 chrUextra 25412213 25412840 -3591816 + SAR_DM Satellite Satellite 256 903 -569 1 778 2822 183 8 21 chrUextra 25412943 25413563 -3591093 - SAR_DM Satellite Satellite -361 1111 500 1 778 5102 4 4 2 chrUextra 25413736 25414294 -3590362 - LSU-rRNA_Dme rRNA rRNA 0 3900 3342 1 778 25 0 0 0 chrUextra 25414455 25414480 -3590176 + AT_rich Low_complexity Low_complexity 1 25 0 1 778 2108 68 24 29 chrUextra 25414700 25415020 -3589636 + IDEFIX_I LTR Gypsy 1 269 -5359 1 778 2821 187 8 21 chrUextra 25415121 25415748 -3588908 + SAR_DM Satellite Satellite 483 1101 -371 1 778 2462 36 63 0 chrUextra 25415854 25416157 -3588499 + DMCR1A LINE CR1 4149 4470 0 1 778 2775 28 0 0 chrUextra 25416156 25416475 -3588181 + DOC3_DM LINE Jockey 811 1129 -3611 1 778 960 83 5 19 chrUextra 25416575 25417202 -3587454 - RSP Satellite Satellite -36 618 1 1 778 279 206 0 0 chrUextra 25417302 25417365 -3587291 + XDMR Unknown Unknown 299 361 0 1 778 2698 177 11 31 chrUextra 25417310 25417927 -3586729 - SAR_DM Satellite Satellite -354 1118 514 1 778 5769 2 2 2 chrUextra 25418029 25418656 -3586000 - DOC LINE Jockey -828 3897 3271 1 778 5275 34 14 0 chrUextra 25418756 25419383 -3585273 + MAX_I LTR Pao 2723 3358 -4556 1 778 3103 25 0 8 chrUextra 25419483 25419848 -3584808 + PROTOP_A DNA P 744 1105 0 1 778 2301 8 0 0 chrUextra 25419848 25420110 -3584546 - ACCORD_I LTR Gypsy -328 5960 5699 1 778 2502 107 5 30 chrUextra 25420210 25420819 -3583837 - DMSAT6 Satellite Satellite -65 594 1 1 778 2991 176 10 10 chrUextra 25420939 25421559 -3583097 - SAR_DM Satellite Satellite -532 940 321 1 778 3849 0 0 0 chrUextra 25421666 25422076 -3582580 - LSU-rRNA_Dme rRNA rRNA -1703 2197 1788 1 778 1427 6 12 12 chrUextra 25422118 25422291 -3582365 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1619 1 778 2947 182 10 10 chrUextra 25422391 25423018 -3581638 - SAR_DM Satellite Satellite -645 827 201 1 778 1964 186 8 19 chrUextra 25423118 25423528 -3581128 + SAR_DM Satellite Satellite 1 540 -637 1 778 1116 82 0 0 chrUextra 25423528 25423686 -3580970 - ARS406_DM Unknown Unknown -195 158 1 1 778 1964 186 8 19 chrUextra 25423686 25423744 -3580912 + SAR_DM Satellite Satellite 541 619 -558 1 778 878 101 104 32 chrUextra 25423845 25423999 -3580657 - R1_DM LINE R1 -5191 165 1 1 778 2080 65 3 35 chrUextra 25424017 25424306 -3580350 + Gypsy6A_LTR LTR Gypsy 71 350 -70 1 778 1123 79 54 12 chrUextra 25424305 25424472 -3580184 - STALKER4_I LTR Gypsy -3666 2864 2691 1 778 2818 190 11 7 chrUextra 25424580 25425195 -3579461 + SAR_DM Satellite Satellite 180 797 -675 1 778 5829 3 0 0 chrUextra 25425299 25425926 -3578730 + LSU-rRNA_Dme rRNA rRNA 2195 2821 -1079 1 778 4747 62 13 8 chrUextra 25426033 25426653 -3578003 - R1_DM LINE R1 -3234 2122 1500 1 778 516 16 0 0 chrUextra 25426753 25426814 -3577842 + (TTCTC)n Simple_repeat Simple_repeat 5 65 0 1 97 2438 107 14 40 chrUextra 25427480 25428106 -3576550 + DMSAT6 Satellite Satellite 1 609 -64 1 779 3980 97 77 1 chrUextra 25428207 25428833 -3575823 + FW2_DM LINE Jockey 1434 1980 -1981 1 779 4807 92 2 0 chrUextra 25428934 25429561 -3575095 - Gypsy12_I LTR Gypsy -939 4607 3980 1 779 572 0 0 14 chrUextra 25429661 25429730 -3574926 + (CAAGA)n Simple_repeat Simple_repeat 5 72 0 1 779 1830 0 0 0 chrUextra 25430388 25430592 -3574064 - NTS_DM Other Other -36 204 1 1 779 1934 17 17 13 chrUextra 25430592 25430831 -3573825 - NTS_DM Other Other 0 240 1 1 779 1308 28 22 22 chrUextra 25430831 25431015 -3573641 - NTS_DM Other Other 0 240 57 1 779 31 0 0 0 chrUextra 25431115 25431146 -3573510 + AT_rich Low_complexity Low_complexity 1 31 0 1 779 4354 2 0 0 chrUextra 25431278 25431742 -3572914 + SSU-rRNA_Dme rRNA rRNA 1 464 -1531 1 779 5490 10 0 0 chrUextra 25431842 25432469 -3572187 + STALKER4_I LTR Gypsy 5630 6256 -274 1 779 3823 27 5 0 chrUextra 25432569 25433014 -3571642 - ROO_I LTR Pao -337 7919 7473 1 779 1430 18 0 0 chrUextra 25433025 25433196 -3571460 - ROO_I LTR Pao -1354 6902 6732 1 779 5634 6 2 2 chrUextra 25433296 25433923 -3570733 + R1_DM LINE R1 4585 5211 -145 1 779 5510 22 0 0 chrUextra 25434023 25434650 -3570006 - FW_DM LINE Jockey -3721 971 345 1 779 721 195 13 25 chrUextra 25434809 25434967 -3569689 - HETRP_DM Satellite Satellite -188 1684 1529 1 779 528 220 15 29 chrUextra 25435086 25435222 -3569434 - HETRP_DM Satellite Satellite -190 1682 1549 1 779 192 40 0 0 chrUextra 25435222 25435247 -3569409 + (TC)n Simple_repeat Simple_repeat 2 26 0 1 779 5683 2 0 2 chrUextra 25436204 25436831 -3567825 + R1_DM LINE R1 3038 3663 -1693 1 779 2503 156 17 32 chrUextra 25436934 25437459 -3567197 + SAR_DM Satellite Satellite 293 809 -663 1 779 2661 83 15 21 chrUextra 25437658 25438274 -3566382 + DMSAT6 Satellite Satellite 1 611 -51 1 779 2683 187 13 11 chrUextra 25439112 25439729 -3564927 - SAR_DM Satellite Satellite -675 797 180 1 779 5063 14 2 6 chrUextra 25439839 25440466 -3564190 - FB4_DM DNA Tc1 -520 3569 2946 1 779 3126 169 16 8 chrUextra 25440566 25441188 -3563468 - SAR_DM Satellite Satellite -473 999 373 1 779 883 10 0 10 chrUextra 25442022 25442125 -3562531 + NTS_DM Other Other 32 133 -107 1 779 1528 15 20 25 chrUextra 25442125 25442329 -3562327 + NTS_DM Other Other 38 240 0 1 779 1873 21 17 17 chrUextra 25442329 25442569 -3562087 + NTS_DM Other Other 1 240 0 1 779 691 26 0 0 chrUextra 25442569 25442647 -3562009 + NTS_DM Other Other 1 78 -162 1 779 5626 11 0 0 chrUextra 25442747 25443374 -3561282 - FW_DM LINE Jockey -1691 3001 2375 1 779 3123 163 10 10 chrUextra 25443474 25444092 -3560564 - SAR_DM Satellite Satellite -486 986 369 1 779 4915 21 18 5 chrUextra 25444201 25444827 -3559829 - R1_DM LINE R1 -1040 4316 3683 1 779 32 0 0 0 chrUextra 25444955 25444987 -3559669 + AT_rich Low_complexity Low_complexity 1 32 0 1 779 3748 5 0 2 chrUextra 25445119 25445553 -3559103 + SSU-rRNA_Dme rRNA rRNA 1 433 -1562 1 779 5072 19 0 0 chrUextra 25446379 25447005 -3557651 - DM412 LTR Gypsy -481 6416 5791 1 779 2196 111 16 16 chrUextra 25447105 25447730 -3556926 - DMSAT6 Satellite Satellite -163 625 1 1 779 809 101 0 0 chrUextra 25447831 25447960 -3556696 - ARS406_DM Unknown Unknown -224 129 1 1 779 2465 182 14 15 chrUextra 25447867 25448457 -3556199 + SAR_DM Satellite Satellite 195 783 -689 1 779 2635 161 14 8 chrUextra 25448558 25449182 -3555474 + SAR_DM Satellite Satellite 371 1264 -208 1 779 313 250 118 100 chrUextra 25449587 25449867 -3554789 - Invader1_LTR LTR Gypsy -55 368 84 1 779 31 0 0 0 chrUextra 25450013 25450044 -3554612 + AT_rich Low_complexity Low_complexity 1 31 0 1 779 4009 2 2 0 chrUextra 25450176 25450635 -3554021 + SSU-rRNA_Dme rRNA rRNA 1 460 -1535 1 779 413 0 62 46 chrUextra 25450735 25450800 -3553856 + NTS_DM Other Other 175 240 0 1 779 1301 6 0 18 chrUextra 25450800 25450965 -3553691 + NTS_DM Other Other 1 162 -78 1 779 488 119 36 0 chrUextra 25451075 25451159 -3553497 + NTS_DM Other Other 4 90 -150 1 779 5475 2 2 0 chrUextra 25451461 25452087 -3552569 + SSU-rRNA_Dme rRNA rRNA 294 920 -1075 1 779 5244 0 2 2 chrUextra 25452211 25452813 -3551843 - LSU-rRNA_Dme rRNA rRNA 0 3900 3299 1 779 1150 7 0 0 chrUextra 25453095 25453230 -3551426 - 5S_DM RNA RNA 0 135 1 1 779 693 12 0 0 chrUextra 25453457 25453539 -3551117 - 5S_DM RNA RNA 0 135 54 1 779 2823 161 23 11 chrUextra 25453642 25454257 -3550399 + SAR_DM Satellite Satellite 282 903 -569 1 779 5352 0 2 5 chrUextra 25454365 25454991 -3549665 + SSU-rRNA_Dme rRNA rRNA 877 1500 -495 1 779 2845 172 6 6 chrUextra 25455094 25455715 -3548941 - SAR_DM Satellite Satellite -615 857 237 1 779 410 0 20 0 chrUextra 25456392 25456443 -3548213 - PROTOP_A DNA P -1 1104 1052 1 779 2827 168 11 10 chrUextra 25456545 25457169 -3547487 - SAR_DM Satellite Satellite -435 1037 413 1 779 180 0 0 0 chrUextra 25457269 25457289 -3547367 + (GAGAA)n Simple_repeat Simple_repeat 4 23 0 1 779 5127 19 2 0 chrUextra 25458721 25459347 -3545309 - STALKER4_I LTR Gypsy -4086 2444 1818 1 779 1548 0 0 0 chrUextra 25459447 25459619 -3545037 + (GAGAA)n Simple_repeat Simple_repeat 4 175 0 1 779 5430 0 3 0 chrUextra 25460175 25460799 -3543857 - LSU-rRNA_Dme rRNA rRNA -459 3441 2816 1 779 202 265 0 0 chrUextra 25460917 25460966 -3543690 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 779 2768 174 14 11 chrUextra 25461625 25462246 -3542410 + SAR_DM Satellite Satellite 267 889 -583 1 779 337 313 50 54 chrUextra 25462354 25462911 -3541745 - BLASTOPIA_I LTR Gypsy -2302 2586 2180 1 779 586 138 0 0 chrUextra 25463077 25463186 -3541470 - ARS406_DM Unknown Unknown -244 109 1 1 779 2719 178 7 8 chrUextra 25463093 25463700 -3540956 + SAR_DM Satellite Satellite 195 800 -672 1 779 2172 121 8 24 chrUextra 25463805 25464428 -3540228 - DMSAT6 Satellite Satellite -30 612 1 1 779 2633 154 13 44 chrUextra 25464550 25465146 -3539510 + SAR_DM Satellite Satellite 326 903 -569 1 779 3516 0 2 0 chrUextra 25465255 25465659 -3538997 + LSU-rRNA_Dme rRNA rRNA 2248 2652 -1248 1 779 1605 0 5 5 chrUextra 25465686 25465878 -3538778 + R1_DM LINE R1 1 192 -5164 1 779 5050 14 8 0 chrUextra 25465981 25466607 -3538049 - G_DM LINE Jockey -1553 2793 2163 1 779 5113 11 0 2 chrUextra 25466707 25467333 -3537323 - DM176_I LTR Gypsy -1139 5281 4657 1 779 2274 136 25 28 chrUextra 25467434 25468049 -3536607 - DMSAT6 Satellite Satellite -28 613 1 1 779 4898 30 0 2 chrUextra 25468159 25468785 -3535871 - PROTOP_A DNA P -90 1015 391 1 779 1744 21 17 17 chrUextra 25468888 25469128 -3535528 + NTS_DM Other Other 1 240 0 1 779 1756 17 17 17 chrUextra 25469128 25469368 -3535288 + NTS_DM Other Other 1 240 0 1 779 1155 21 0 0 chrUextra 25469368 25469511 -3535145 + NTS_DM Other Other 1 143 -97 1 779 2341 98 45 34 chrUextra 25469611 25470237 -3534419 + DMSAT6 Satellite Satellite 1 633 -267 1 779 1364 20 20 25 chrUextra 25470337 25470539 -3534117 + NTS_DM Other Other 40 240 0 1 779 1850 4 17 13 chrUextra 25470539 25470778 -3533878 + NTS_DM Other Other 1 240 0 1 779 1543 5 0 0 chrUextra 25470778 25470963 -3533693 + NTS_DM Other Other 1 185 -55 1 779 569 190 42 7 chrUextra 25471070 25471213 -3533443 + Gypsy5_I LTR Gypsy 4409 4556 -1953 1 779 215 279 0 0 chrUextra 25471216 25471259 -3533397 + polypurine Low_complexity Low_complexity 4 46 0 1 779 766 201 11 43 chrUextra 25471274 25471645 -3533011 + GA-rich Low_complexity Low_complexity 1 358 0 1 779 2606 188 8 8 chrUextra 25471789 25472411 -3532245 + SAR_DM Satellite Satellite 274 895 -577 1 779 2706 44 57 3 chrUextra 25473499 25473867 -3530789 - PROTOP_A DNA P 0 1105 718 1 779 21 89 0 0 chrUextra 25474317 25474373 -3530283 + AT_rich Low_complexity Low_complexity 1 56 0 1 779 26 30 0 0 chrUextra 25474492 25474525 -3530131 + AT_rich Low_complexity Low_complexity 1 33 0 1 779 3337 44 48 0 chrUextra 25474695 25475149 -3529507 + PROTOP_A DNA P 630 1105 0 1 779 2805 157 46 11 chrUextra 25475420 25476045 -3528611 - SAR_DM Satellite Satellite -448 1024 378 1 779 2418 95 5 34 chrUextra 25476145 25476767 -3527889 + DMSAT6 Satellite Satellite 1 604 -69 1 779 4832 46 6 2 chrUextra 25476871 25477497 -3527159 - R1_DM LINE R1 -3657 1699 1071 1 779 2381 3 0 3 chrUextra 25477599 25477916 -3526740 + HMSBEAGLE_I LTR Gypsy 472 787 -5742 1 779 953 35 52 12 chrUextra 25477928 25478100 -3526556 + (TTA)n Simple_repeat Simple_repeat 1 179 0 1 779 1035 8 0 0 chrUextra 25478100 25478223 -3526433 + HMSBEAGLE_I LTR Gypsy 969 1091 -5438 1 779 2711 166 12 8 chrUextra 25478326 25478926 -3525730 - SAR_DM Satellite Satellite -625 847 246 1 779 391 95 0 0 chrUextra 25478886 25478949 -3525707 + ARS406_DM Unknown Unknown 1 63 -290 1 779 1620 0 0 0 chrUextra 25479049 25479286 -3525370 + (GAGAA)n Simple_repeat Simple_repeat 1 237 0 1 779 435 188 103 103 chrUextra 25479784 25480271 -3524385 - ROVER-I_DM LTR Gypsy -5967 617 131 1 779 192 77 0 0 chrUextra 25480300 25480326 -3524330 + (T)n Simple_repeat Simple_repeat 1 26 0 1 779 726 269 28 14 chrUextra 25481227 25481513 -3523143 - XDMR_DM Unknown Unknown -53 307 18 1 779 3369 251 35 28 chrUextra 25481261 25482537 -3522119 + SAR_DM Satellite Satellite 1 1284 -216 1 779 2705 3 0 0 chrUextra 25482679 25483000 -3521656 - Copia_I LTR Copia -527 4066 3746 1 779 2538 10 0 0 chrUextra 25482993 25483305 -3521351 - Copia_I LTR Copia -1031 3562 3251 1 779 3639 0 0 0 chrUextra 25483407 25483821 -3520835 + R2_DM LINE R2 3185 3598 -9 1 779 1851 9 0 0 chrUextra 25483817 25484031 -3520625 + LSU-rRNA_Dme rRNA rRNA 2578 2791 -1109 1 779 2622 172 13 13 chrUextra 25484150 25484757 -3519899 + SAR_DM Satellite Satellite 399 1005 -467 1 779 2793 159 15 8 chrUextra 25484869 25485477 -3519179 + SAR_DM Satellite Satellite 326 937 -535 1 779 2307 96 8 20 chrUextra 25485583 25486191 -3518465 - DMSAT6 Satellite Satellite -34 601 1 1 779 513 6 0 138 chrUextra 25486314 25486495 -3518161 + (TAAAAA)n Simple_repeat Simple_repeat 3 158 0 1 779 1146 279 15 22 chrUextra 25487845 25488384 -3516272 - SAR_DM Satellite Satellite -721 751 217 1 779 21 0 0 0 chrUextra 25488699 25488720 -3515936 + AT_rich Low_complexity Low_complexity 1 21 0 1 779 247 62 0 0 chrUextra 25488736 25488768 -3515888 - NTS_DM Other Other -207 33 2 1 779 34 24 0 0 chrUextra 25489568 25489609 -3515047 + AT_rich Low_complexity Low_complexity 1 41 0 1 779 4384 24 2 0 chrUextra 25489939 25490479 -3514177 - R1_DM LINE R1 -2394 2962 2422 1 779 689 24 0 0 chrUextra 25490480 25490565 -3514091 - ACCORD2_LTR LTR Gypsy -1 214 130 1 779 5472 5 0 0 chrUextra 25490665 25491291 -3513365 - SSU-rRNA_Dme rRNA rRNA -1203 792 167 1 779 5118 18 5 0 chrUextra 25491391 25492017 -3512639 + STALKER4_I LTR Gypsy 1763 2391 -4139 1 779 289 113 19 0 chrUextra 25492117 25492170 -3512486 - ARS406_DM Unknown Unknown -299 54 1 1 779 2294 188 10 6 chrUextra 25492130 25492743 -3511913 + SAR_DM Satellite Satellite 1 614 -677 1 779 5031 11 22 13 chrUextra 25492843 25493469 -3511187 - CIRCE LINE Composite -2223 4133 3502 1 779 49 0 0 0 chrUextra 25494110 25494159 -3510497 + AT_rich Low_complexity Low_complexity 1 49 0 1 779 4777 2 0 0 chrUextra 25494295 25494842 -3509814 - LSU-rRNA_Dme rRNA rRNA -1566 2334 1788 1 779 248 0 0 29 chrUextra 25494886 25494921 -3509735 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1755 1 779 1955 17 4 0 chrUextra 25495021 25495262 -3509394 + DIVER2_I LTR Pao 3906 4147 0 1 779 3099 34 3 0 chrUextra 25495262 25495646 -3509010 + DIVER2_LTR LTR Pao 1 385 0 1 779 3408 82 9 29 chrUextra 25496476 25497028 -3507628 + CIRCE LINE Composite 4440 4980 -1376 1 779 401 0 0 57 chrUextra 25497199 25497252 -3507404 - NTS_DM Other Other -166 74 25 1 779 22 56 0 0 chrUextra 25497278 25497314 -3507342 + AT_rich Low_complexity Low_complexity 1 36 0 1 779 225 125 0 24 chrUextra 25497327 25497368 -3507288 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 779 246 150 0 0 chrUextra 25497411 25497451 -3507205 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 779 246 150 0 0 chrUextra 25497503 25497543 -3507113 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 779 22 56 0 0 chrUextra 25497548 25497584 -3507072 + AT_rich Low_complexity Low_complexity 1 36 0 1 779 1464 6 0 0 chrUextra 25497656 25497825 -3506831 - LSU-rRNA_Dme rRNA rRNA 0 3900 3732 1 779 2418 67 18 31 chrUextra 25497925 25498308 -3506348 - Gypsy12_I LTR Gypsy -5168 378 1 1 779 314 211 34 34 chrUextra 25498322 25498469 -3506187 - Gypsy12A_LTR LTR Gypsy -553 1727 1581 1 779 2706 181 10 5 chrUextra 25499382 25500000 -3504656 + SAR_DM Satellite Satellite 230 850 -622 1 779 378 171 40 0 chrUextra 25500266 25500342 -3504314 + NTS_DM Other Other 12 90 -150 1 779 28 48 0 0 chrUextra 25500616 25500658 -3503998 + AT_rich Low_complexity Low_complexity 1 42 0 1 779 2685 185 11 6 chrUextra 25500832 25501453 -3503203 - SAR_DM Satellite Satellite -593 879 256 1 779 2696 179 10 8 chrUextra 25501553 25502178 -3502478 - SAR_DM Satellite Satellite -554 918 293 1 779 2830 166 13 10 chrUextra 25503003 25503628 -3501028 + SAR_DM Satellite Satellite 379 1005 -467 1 779 2452 53 104 6 chrUextra 25503730 25504353 -3500303 + IDEFIX_I LTR Gypsy 1218 1901 -3727 1 779 2721 181 6 13 chrUextra 25504453 25505078 -3499578 + SAR_DM Satellite Satellite 297 917 -555 1 779 2833 30 0 0 chrUextra 25505178 25505517 -3499139 - TABOR_LTR LTR Gypsy -167 339 1 1 779 1554 21 0 0 chrUextra 25505521 25505803 -3498853 + (TTGTG)n Simple_repeat Simple_repeat 1 282 0 1 779 2824 144 25 17 chrUextra 25505936 25506528 -3498128 + SAR_DM Satellite Satellite 369 965 -507 1 779 3533 0 9 2 chrUextra 25507353 25507776 -3496880 + LSU-rRNA_Dme rRNA rRNA 1363 1788 -2112 1 779 1353 0 0 6 chrUextra 25507820 25507978 -3496678 + LSU-rRNA_Dme rRNA rRNA 1788 1944 -1956 1 779 4589 47 0 13 chrUextra 25508078 25508702 -3495954 + ACCORD2_I LTR Gypsy 2648 3263 -3949 1 779 4531 54 0 0 chrUextra 25509528 25510139 -3494517 - IDEFIX_I LTR Gypsy -4403 1225 615 1 779 5438 2 2 0 chrUextra 25510253 25510878 -3493778 + LSU-rRNA_Dme rRNA rRNA 2740 3365 -535 1 779 1247 19 0 7 chrUextra 25511377 25511532 -3493124 + (TTCTC)n Simple_repeat Simple_repeat 1 154 0 1 779 402 39 0 0 chrUextra 25511551 25511603 -3493053 + (GAGAA)n Simple_repeat Simple_repeat 1 52 0 1 779 28 48 0 0 chrUextra 25511974 25512016 -3492640 + AT_rich Low_complexity Low_complexity 1 42 0 1 779 2589 182 8 10 chrUextra 25512428 25513034 -3491622 - SAR_DM Satellite Satellite -673 799 195 1 779 618 134 0 9 chrUextra 25512940 25513053 -3491603 + ARS406_DM Unknown Unknown 1 112 -241 1 779 5376 3 0 0 chrUextra 25513153 25513778 -3490878 - R1_DM LINE R1 -1800 3556 2932 1 779 819 83 3 18 chrUextra 25513897 25514484 -3490172 + RSP Satellite Satellite 1 578 0 1 779 519 92 0 0 chrUextra 25514603 25514690 -3489966 + (ACATG)n Simple_repeat Simple_repeat 4 90 0 1 779 2563 176 34 8 chrUextra 25515329 25515946 -3488710 - SAR_DM Satellite Satellite -645 827 195 1 779 755 97 8 0 chrUextra 25516779 25516903 -3487753 - ARS406_DM Unknown Unknown -228 125 1 1 779 2553 175 14 8 chrUextra 25516810 25517403 -3487253 + SAR_DM Satellite Satellite 195 790 -682 1 779 3766 0 0 0 chrUextra 25517648 25518076 -3486580 + ROO_LTR LTR Pao 1 428 0 1 779 2149 219 13 14 chrUextra 25518954 25519578 -3485078 - SAR_DM Satellite Satellite -1089 623 1 1 779 2943 184 5 8 chrUextra 25519678 25520271 -3484385 + Gypsy5_I LTR Gypsy 3170 3760 -2749 1 779 1705 174 3 6 chrUextra 25520413 25520772 -3483884 + SAR_DM Satellite Satellite 546 903 -569 1 779 1006 95 0 0 chrUextra 25520779 25520937 -3483719 - ARS406_DM Unknown Unknown -195 158 1 1 779 923 221 0 4 chrUextra 25520787 25521028 -3483628 + SAR_DM Satellite Satellite 496 735 -737 1 779 5010 21 29 0 chrUextra 25521128 25521751 -3482905 - FW_DM LINE Jockey -1796 2896 2256 1 779 1005 20 26 20 chrUextra 25521853 25522004 -3482652 + NTS_DM Other Other 89 240 0 1 779 1847 4 17 13 chrUextra 25522004 25522243 -3482413 + NTS_DM Other Other 1 240 0 1 779 1279 12 0 18 chrUextra 25522243 25522408 -3482248 + NTS_DM Other Other 1 162 -78 1 779 1587 18 0 0 chrUextra 25522595 25522879 -3481777 + (GAGAA)n Simple_repeat Simple_repeat 1 284 0 1 779 5431 3 2 0 chrUextra 25523303 25523928 -3480728 + LSU-rRNA_Dme rRNA rRNA 2859 3484 -416 1 779 2872 166 10 10 chrUextra 25524028 25524653 -3480003 - SAR_DM Satellite Satellite -515 957 333 1 779 5390 8 0 0 chrUextra 25524753 25525378 -3479278 + Gypsy4_I LTR Gypsy 2813 3437 -2851 1 779 4854 31 13 8 chrUextra 25525478 25526103 -3478553 - CIRCE LINE Composite -3688 2668 2041 1 779 2952 0 0 0 chrUextra 25526203 25526547 -3478109 - LSU-rRNA_Dme rRNA rRNA -2896 1004 661 1 779 2448 3 3 0 chrUextra 25526543 25526828 -3477828 - SSU-rRNA_Dme rRNA rRNA -1669 326 41 1 779 4685 6 9 0 chrUextra 25526928 25527478 -3477178 - DMRT1B LINE R1 -1093 4090 3536 1 779 675 0 0 0 chrUextra 25527478 25527553 -3477103 + (CACAA)n Simple_repeat Simple_repeat 1 75 0 1 779 2081 108 48 42 chrUextra 25527653 25528092 -3476564 + Gypsy12_I LTR Gypsy 461 976 -4570 1 779 287 264 0 0 chrUextra 25528099 25528186 -3476470 + TOM_I LTR Gypsy 3276 3362 -2750 1 779 350 125 13 77 chrUextra 25528199 25528277 -3476379 + Gypsy12_LTR LTR Gypsy 1 73 -2263 1 779 49 0 0 0 chrUextra 25528698 25528747 -3475909 + AT_rich Low_complexity Low_complexity 1 49 0 1 779 870 9 0 27 chrUextra 25529115 25529227 -3475429 + NTS_DM Other Other 25 133 -107 1 779 1222 18 0 12 chrUextra 25529227 25529393 -3475263 + NTS_DM Other Other 38 201 -39 1 779 870 9 0 27 chrUextra 25529445 25529557 -3475099 + NTS_DM Other Other 25 133 -107 1 779 1252 18 0 6 chrUextra 25529557 25529722 -3474934 + NTS_DM Other Other 38 201 -39 1 779 820 92 0 37 chrUextra 25529828 25529964 -3474692 - DIVER_LTR LTR Pao -93 131 1 1 779 3888 41 2 0 chrUextra 25529964 25530453 -3474203 - DIVER_I LTR Pao 0 5643 5154 1 779 2158 110 50 17 chrUextra 25530569 25531173 -3473483 + DMSAT6 Satellite Satellite 1 624 -3 1 779 1524 22 0 0 chrUextra 25531516 25531696 -3472960 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 779 1104 89 0 0 chrUextra 25531720 25531900 -3472756 + (CATCT)n Simple_repeat Simple_repeat 1 180 0 1 779 891 10 0 0 chrUextra 25532003 25532107 -3472549 - NTS_DM Other Other -136 104 1 1 779 1710 25 17 17 chrUextra 25532107 25532347 -3472309 - NTS_DM Other Other 0 240 1 1 779 1302 40 20 20 chrUextra 25532348 25532550 -3472106 - NTS_DM Other Other -1 239 38 1 779 626 0 0 0 chrUextra 25532550 25532628 -3472028 - NTS_DM Other Other -107 133 56 1 779 5478 0 0 2 chrUextra 25532728 25533353 -3471303 + Gypsy12_I LTR Gypsy 3953 4576 -970 1 779 5317 13 0 0 chrUextra 25533453 25534078 -3470578 - Gypsy4_I LTR Gypsy -3119 3169 2545 1 779 4851 5 5 0 chrUextra 25534178 25534803 -3469853 + ROVER-I_DM LTR Gypsy 5873 6500 -84 1 779 5434 3 0 0 chrUextra 25534903 25535528 -3469128 - LSU-rRNA_Dme rRNA rRNA -1098 2802 2178 1 779 2026 217 25 45 chrUextra 25536367 25536974 -3467682 + TAHRE LINE telomeric 7213 7807 -2656 1 779 320 91 18 0 chrUextra 25537078 25537133 -3467523 - ARS406_DM Unknown Unknown -297 56 1 1 779 2800 173 15 5 chrUextra 25537093 25537703 -3466953 + SAR_DM Satellite Satellite 246 861 -611 1 779 1317 6 27 16 chrUextra 25537805 25537990 -3466666 + NTS_DM Other Other 54 240 0 1 779 1821 8 17 13 chrUextra 25537990 25538229 -3466427 + NTS_DM Other Other 1 240 0 1 779 1264 12 0 18 chrUextra 25538229 25538394 -3466262 + NTS_DM Other Other 1 162 -78 1 779 2848 176 3 8 chrUextra 25538528 25539151 -3465505 + SAR_DM Satellite Satellite 251 870 -602 1 779 5166 2 0 2 chrUextra 25539282 25539878 -3464778 - LSU-rRNA_Dme rRNA rRNA -1267 2633 2039 1 779 3401 29 7 24 chrUextra 25539978 25540436 -3464220 + ROO_I LTR Pao 3756 4205 -4051 1 779 1256 24 0 0 chrUextra 25540433 25540603 -3464053 - FW_DM LINE Jockey 0 4692 4523 1 779 2266 54 28 22 chrUextra 25540703 25541025 -3463631 + R1_DM LINE R1 1920 2243 -3113 1 779 1005 69 7 0 chrUextra 25541181 25541326 -3463330 + Baggins1 LINE LOA 4791 4936 -517 1 779 2865 166 6 10 chrUextra 25541428 25542049 -3462607 + SAR_DM Satellite Satellite 438 1056 -416 1 779 3236 57 20 7 chrUextra 25542153 25542594 -3462062 - DMCR1A LINE CR1 -369 4101 3655 1 779 1346 94 0 0 chrUextra 25542587 25542778 -3461878 - DMCR1A LINE CR1 -950 3520 3330 1 779 4923 32 0 2 chrUextra 25542878 25543503 -3461153 - NINJA_I LTR Pao -129 5882 5259 1 779 5446 2 0 0 chrUextra 25543603 25544228 -3460428 + DOC LINE Jockey 3370 3994 -731 1 779 2758 183 8 5 chrUextra 25544328 25544950 -3459706 + SAR_DM Satellite Satellite 256 879 -593 1 779 5463 2 0 2 chrUextra 25545053 25545678 -3458978 + SSU-rRNA_Dme rRNA rRNA 182 805 -1190 1 779 2279 112 18 10 chrUextra 25545778 25546392 -3458264 - DMSAT6 Satellite Satellite -66 618 1 1 779 5415 2 2 0 chrUextra 25546504 25547128 -3457528 - LSU-rRNA_Dme rRNA rRNA -1319 2581 1957 1 779 363 105 18 0 chrUextra 25547232 25547289 -3457367 - HETRP_DM Satellite Satellite -286 1586 1529 1 779 612 199 6 50 chrUextra 25547423 25547582 -3457074 - HETRP_DM Satellite Satellite -203 1669 1518 1 779 674 186 7 7 chrUextra 25547698 25547839 -3456817 - HETRP_DM Satellite Satellite -203 1669 1529 1 779 1101 286 84 26 chrUextra 25547954 25548572 -3456084 + Invader2_I LTR Gypsy 3243 3896 -696 1 779 2575 78 14 10 chrUextra 25548678 25549303 -3455353 + DMSAT6 Satellite Satellite 1 628 -85 1 779 745 10 21 0 chrUextra 25549403 25549499 -3455157 + NTS_DM Other Other 36 133 -107 1 779 817 0 0 0 chrUextra 25549499 25549595 -3455061 + NTS_DM Other Other 38 133 -107 1 779 1408 20 20 20 chrUextra 25549595 25549798 -3454858 + NTS_DM Other Other 38 240 0 1 779 1657 18 18 18 chrUextra 25549798 25550027 -3454629 + NTS_DM Other Other 1 229 -11 1 779 5396 0 2 3 chrUextra 25550128 25550753 -3453903 + SSU-rRNA_Dme rRNA rRNA 1074 1697 -298 1 779 5104 24 0 0 chrUextra 25550853 25551478 -3453178 - R1_DM LINE R1 -3124 2232 1608 1 779 5082 29 0 0 chrUextra 25551578 25552203 -3452453 + R1_DM LINE R1 2702 3326 -2030 1 779 5400 0 3 2 chrUextra 25552303 25552927 -3451729 - SSU-rRNA_Dme rRNA rRNA -122 1873 1249 1 779 5349 0 0 2 chrUextra 25553028 25553653 -3451003 - MAX_I LTR Pao -6377 1537 914 1 779 2656 16 175 0 chrUextra 25553753 25554124 -3450532 + MDG3_I LTR Gypsy 4551 4986 0 1 779 2016 20 8 0 chrUextra 25554124 25554378 -3450278 + MDG3_LTR LTR Gypsy 1 256 -11 1 779 4660 33 66 0 chrUextra 25554478 25555103 -3449553 - R1_DM LINE R1 -2440 2916 2251 1 779 1532 160 8 13 chrUextra 25555226 25555822 -3448834 - SAR_DM Satellite Satellite -396 593 1 1 779 256 128 0 0 chrUextra 25555781 25555828 -3448828 + ARS406_DM Unknown Unknown 1 47 -306 1 779 802 9 9 36 chrUextra 25555945 25556057 -3448599 - NTS_DM Other Other -107 133 25 1 779 21 57 0 0 chrUextra 25556084 25556119 -3448537 + AT_rich Low_complexity Low_complexity 1 35 0 1 779 1252 18 0 6 chrUextra 25556119 25556284 -3448372 - NTS_DM Other Other -39 201 38 1 779 907 9 0 27 chrUextra 25556284 25556396 -3448260 - NTS_DM Other Other -107 133 25 1 779 652 39 0 19 chrUextra 25556448 25556553 -3448103 - NTS_DM Other Other -39 201 99 1 779 2755 233 3 3 chrUextra 25556655 25557278 -3447378 - TABOR_I LTR Gypsy -1822 4514 3892 1 779 877 90 26 6 chrUextra 25557765 25557921 -3446735 + (TTCTC)n Simple_repeat Simple_repeat 2 160 0 1 779 537 30 0 0 chrUextra 25557936 25558003 -3446653 + (GAGAA)n Simple_repeat Simple_repeat 3 69 0 1 779 2951 176 10 6 chrUextra 25558104 25558727 -3445929 - SAR_DM Satellite Satellite -561 911 287 1 97 2762 12 0 0 chrUextra 25558828 25559151 -3445505 + QUASIMODO_I LTR Gypsy 2631 2953 -3107 1 780 2466 3 7 0 chrUextra 25559163 25559453 -3445203 + QUASIMODO_I LTR Gypsy 3730 4021 -2039 1 780 5435 0 2 3 chrUextra 25559553 25560178 -3444478 + R1_DM LINE R1 608 1231 -4125 1 780 2868 178 10 10 chrUextra 25560279 25560902 -3443754 + SAR_DM Satellite Satellite 301 923 -549 1 780 243 0 0 0 chrUextra 25561003 25561030 -3443626 + (TTCTC)n Simple_repeat Simple_repeat 2 28 0 1 780 2401 120 13 28 chrUextra 25561730 25562353 -3442303 + DMSAT6 Satellite Satellite 1 613 -3 1 780 4926 24 0 45 chrUextra 25562453 25563078 -3441578 - CIRCE LINE Composite -5689 667 71 1 780 5331 10 6 3 chrUextra 25563178 25563803 -3440853 + QUASIMODO_I LTR Gypsy 1928 2554 -3506 1 780 4110 44 6 0 chrUextra 25563903 25564423 -3440233 - PROTOP_A DNA P -509 596 74 1 780 1233 133 121 44 chrUextra 25564629 25564968 -3439688 + STALKER4_I LTR Gypsy 799 1163 -5367 1 780 2327 7 0 7 chrUextra 25564969 25565253 -3439403 + STALKER4_I LTR Gypsy 1273 1554 -4976 1 780 2742 0 0 3 chrUextra 25565353 25565655 -3439001 - LSU-rRNA_Dme rRNA rRNA -1812 2088 1788 1 780 2386 4 7 4 chrUextra 25565699 25565978 -3438678 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1509 1 780 5685 0 2 2 chrUextra 25566802 25567426 -3437230 + LSU-rRNA_Dme rRNA rRNA 3177 3800 -100 1 780 28 48 0 0 chrUextra 25568533 25568575 -3436081 + AT_rich Low_complexity Low_complexity 1 42 0 1 780 1377 217 28 18 chrUextra 25568974 25569584 -3435072 + SAR_DM Satellite Satellite 1 616 -749 1 780 5341 22 0 0 chrUextra 25569698 25570322 -3434334 + NINJA_I LTR Pao 1885 2508 -3503 1 780 5590 2 2 3 chrUextra 25570422 25571046 -3433610 - SSU-rRNA_Dme rRNA rRNA -533 1462 840 1 780 3040 162 13 11 chrUextra 25571146 25571770 -3432886 + SAR_DM Satellite Satellite 390 1014 -458 1 780 1569 201 15 80 chrUextra 25571871 25572493 -3432163 + HETA LINE telomeric 3426 3946 -2135 1 780 26 30 0 0 chrUextra 25572964 25572997 -3431659 + AT_rich Low_complexity Low_complexity 1 33 0 1 780 2734 184 7 10 chrUextra 25573318 25573918 -3430738 - SAR_DM Satellite Satellite -680 792 195 1 780 733 111 0 0 chrUextra 25573825 25573942 -3430714 + ARS406_DM Unknown Unknown 1 117 -236 1 780 2660 185 7 23 chrUextra 25574042 25574655 -3430001 + SAR_DM Satellite Satellite 516 1118 -354 1 780 293 172 16 0 chrUextra 25574600 25574664 -3429992 - XDMR Unknown Unknown 0 361 297 1 780 2655 178 8 26 chrUextra 25574766 25575390 -3429266 - SAR_DM Satellite Satellite -359 1113 501 1 780 2163 104 110 0 chrUextra 25575490 25575836 -3428820 - DMCR1A LINE CR1 -500 3970 3587 1 780 792 52 326 0 chrUextra 25575833 25575968 -3428688 - DMCR1A LINE CR1 -1255 3215 3037 1 780 1181 29 7 0 chrUextra 25575974 25576114 -3428542 - DMCR1A LINE CR1 -1555 2915 2775 1 780 2788 3 0 0 chrUextra 25576938 25577259 -3427397 + ROO_I LTR Pao 3434 3754 -4502 1 780 2728 3 0 3 chrUextra 25577253 25577562 -3427094 + ROO_I LTR Pao 4134 4441 -3815 1 780 2783 181 13 11 chrUextra 25577663 25578285 -3426371 - SAR_DM Satellite Satellite -645 827 205 1 780 24 96 0 0 chrUextra 25579177 25579250 -3425406 + AT_rich Low_complexity Low_complexity 1 73 0 1 780 2913 179 8 8 chrUextra 25579837 25580458 -3424198 + SAR_DM Satellite Satellite 293 913 -559 1 780 372 306 66 64 chrUextra 25580655 25581171 -3423485 - BLASTOPIA_I LTR Gypsy -1885 2596 2080 1 780 5430 19 2 0 chrUextra 25581282 25581906 -3422750 - FW_DM LINE Jockey -491 4201 3577 1 780 2831 164 40 15 chrUextra 25582012 25582629 -3422027 - SAR_DM Satellite Satellite -514 958 326 1 780 1023 0 0 8 chrUextra 25582730 25582848 -3421808 - NTS_DM Other Other -123 117 1 1 780 1930 4 17 13 chrUextra 25582848 25583087 -3421569 - NTS_DM Other Other 0 240 1 1 780 1813 21 17 17 chrUextra 25583087 25583327 -3421329 - NTS_DM Other Other 0 240 1 1 780 568 40 0 0 chrUextra 25583454 25583528 -3421128 + R2_DM LINE R2 3534 3607 0 1 780 655 14 0 0 chrUextra 25583529 25583602 -3421054 + LSU-rRNA_Dme rRNA rRNA 2583 2655 -1245 1 780 3734 36 41 2 chrUextra 25583600 25584068 -3420588 + R1_DM LINE R1 4802 5287 -69 1 780 849 10 10 0 chrUextra 25584181 25584282 -3420374 + NTS_DM Other Other 32 133 -107 1 780 1304 18 0 6 chrUextra 25584282 25584447 -3420209 + NTS_DM Other Other 38 201 -39 1 780 907 9 0 27 chrUextra 25584499 25584611 -3420045 + NTS_DM Other Other 25 133 -107 1 780 1304 18 0 6 chrUextra 25584611 25584776 -3419880 + NTS_DM Other Other 38 201 -39 1 780 3218 204 0 5 chrUextra 25584902 25585526 -3419130 - ROVER-I_DM LTR Gypsy -3376 3208 2588 1 780 2429 91 27 10 chrUextra 25585626 25586250 -3418406 + DMSAT6 Satellite Satellite 1 635 -3 1 780 5576 0 0 2 chrUextra 25586350 25586974 -3417682 + ROO_I LTR Pao 3992 4614 -3642 1 780 2495 174 56 16 chrUextra 25587076 25587682 -3416974 - SAR_DM Satellite Satellite -645 827 198 1 780 444 140 58 29 chrUextra 25587595 25587698 -3416958 + ARS406_DM Unknown Unknown 1 106 -247 1 780 1902 0 0 0 chrUextra 25587798 25588008 -3416648 - R1_DM LINE R1 -316 5040 4831 1 780 3793 2 0 2 chrUextra 25588002 25588422 -3416234 - LSU-rRNA_Dme rRNA rRNA -1244 2656 2238 1 780 962 58 3 18 chrUextra 25588532 25589119 -3415537 + RSP Satellite Satellite 1 578 0 1 780 5067 7 43 18 chrUextra 25589247 25589870 -3414786 + MAX_I LTR Pao 856 1494 -6420 1 780 2851 186 8 6 chrUextra 25589970 25590594 -3414062 + SAR_DM Satellite Satellite 293 917 -555 1 780 907 84 6 22 chrUextra 25590697 25591318 -3413338 - RSP Satellite Satellite -28 611 1 1 780 5636 0 2 2 chrUextra 25591418 25592042 -3412614 - LSU-rRNA_Dme rRNA rRNA -599 3301 2678 1 780 274 205 505 0 chrUextra 25592144 25592249 -3412407 - DM412 LTR Gypsy -5171 1726 1569 1 780 24 0 0 0 chrUextra 25592360 25592384 -3412272 + AT_rich Low_complexity Low_complexity 1 24 0 1 780 1358 107 22 41 chrUextra 25592448 25592763 -3411893 - DM412B_LTR LTR Gypsy -316 255 1 1 780 1112 181 45 8 chrUextra 25592866 25593490 -3411166 - SAR_DM Satellite Satellite -777 646 1 1 780 1428 0 21 16 chrUextra 25593590 25593777 -3410879 + NTS_DM Other Other 53 240 0 1 780 1940 0 17 13 chrUextra 25593777 25594016 -3410640 + NTS_DM Other Other 1 240 0 1 780 1690 10 0 0 chrUextra 25594016 25594214 -3410442 + NTS_DM Other Other 1 198 -42 1 780 3404 18 0 2 chrUextra 25594314 25594713 -3409943 + R1_DM LINE R1 3885 4282 -1074 1 780 1803 20 0 0 chrUextra 25594733 25594937 -3409719 + R1_DM LINE R1 4407 4610 -746 1 780 4450 93 0 0 chrUextra 25595038 25595662 -3408994 + TART_B1 LINE telomeric 965 1588 -9066 1 780 919 48 0 23 chrUextra 25595763 25595891 -3408765 + BATUMI_I LTR Pao 6627 6751 -1212 1 780 4073 32 2 10 chrUextra 25595884 25596386 -3408270 - BATUMI_I LTR Pao -4489 3474 2977 1 780 514 119 36 0 chrUextra 25596611 25596695 -3407961 + NTS_DM Other Other 4 90 -150 1 780 28 48 0 0 chrUextra 25596969 25597011 -3407645 + AT_rich Low_complexity Low_complexity 1 42 0 1 780 2295 179 51 8 chrUextra 25597299 25597829 -3406827 - SAR_DM Satellite Satellite -674 798 246 1 780 259 133 0 0 chrUextra 25597789 25597834 -3406822 + ARS406_DM Unknown Unknown 1 45 -308 1 780 5248 0 0 2 chrUextra 25597934 25598530 -3406126 - LSU-rRNA_Dme rRNA rRNA -3088 812 218 1 780 1888 0 9 13 chrUextra 25598658 25598889 -3405767 + LSU-rRNA_Dme rRNA rRNA 1559 1788 -2112 1 780 3216 0 0 0 chrUextra 25598933 25599282 -3405374 + LSU-rRNA_Dme rRNA rRNA 1788 2136 -1764 1 780 2840 180 11 10 chrUextra 25599382 25600006 -3404650 + SAR_DM Satellite Satellite 304 928 -544 1 780 22 0 0 0 chrUextra 25600414 25600436 -3404220 + AT_rich Low_complexity Low_complexity 1 22 0 1 780 4719 53 78 0 chrUextra 25600830 25601454 -3403202 - R1_DM LINE R1 -4455 901 229 1 780 930 8 30 23 chrUextra 25601558 25601691 -3402965 + NTS_DM Other Other 107 240 0 1 780 1820 17 17 17 chrUextra 25601691 25601931 -3402725 + NTS_DM Other Other 1 240 0 1 780 1811 21 17 17 chrUextra 25601931 25602171 -3402485 + NTS_DM Other Other 1 240 0 1 780 2509 116 8 22 chrUextra 25602278 25602902 -3401754 - DMSAT6 Satellite Satellite -24 615 1 1 780 406 350 25 45 chrUextra 25603279 25603593 -3401063 - Gypsy6_I LTR Gypsy -5228 1784 1477 1 780 672 200 14 14 chrUextra 25603815 25603962 -3400694 + HETRP_DM Satellite Satellite 1529 1675 -197 1 780 650 207 7 14 chrUextra 25604126 25604268 -3400388 + HETRP_DM Satellite Satellite 1529 1669 -203 1 780 5577 18 0 2 chrUextra 25604450 25605074 -3399582 + R2_DM LINE R2 1131 1753 -1854 1 780 5605 3 0 0 chrUextra 25605174 25605798 -3398858 + R1_DM LINE R1 2843 3466 -1890 1 780 794 11 0 0 chrUextra 25605900 25605992 -3398664 - BLASTOPIA_I LTR Gypsy -4389 92 1 1 780 2115 15 26 15 chrUextra 25605992 25606264 -3398392 - BLASTOPIA_LTR LTR Gypsy 0 275 1 1 780 1158 133 0 0 chrUextra 25606276 25606521 -3398135 + (TA)n Simple_repeat Simple_repeat 1 245 0 1 780 5663 0 5 0 chrUextra 25606622 25607246 -3397410 + LSU-rRNA_Dme rRNA rRNA 3180 3806 -94 1 780 5537 2 2 5 chrUextra 25607346 25607970 -3396686 + LSU-rRNA_Dme rRNA rRNA 997 1618 -2282 1 780 2638 89 15 30 chrUextra 25608070 25608671 -3395985 - DMSAT6 Satellite Satellite -82 592 1 1 780 2555 193 7 21 chrUextra 25608798 25609418 -3395238 + SAR_DM Satellite Satellite 496 1106 -366 1 780 418 328 30 30 chrUextra 25609623 25609868 -3394788 - Gypsy3_I LTR Gypsy -4812 1365 939 1 780 5059 35 8 5 chrUextra 25610242 25610866 -3393790 - CIRCE LINE Composite -2653 3703 3078 1 780 3519 81 71 28 chrUextra 25610971 25611590 -3393066 + STALKER4_I LTR Gypsy 782 1427 -5103 1 780 22 0 0 0 chrUextra 25611933 25611955 -3392701 + AT_rich Low_complexity Low_complexity 1 22 0 1 780 321 232 0 0 chrUextra 25612228 25612297 -3392359 + BS2 LINE Jockey 4146 4214 -507 1 780 2074 203 45 59 chrUextra 25612414 25613038 -3391618 - TAHRE LINE telomeric -2888 7575 6961 1 780 5598 3 2 2 chrUextra 25613138 25613762 -3390894 - R1_DM LINE R1 -1100 4256 3633 1 780 5785 3 0 0 chrUextra 25613862 25614486 -3390170 + LSU-rRNA_Dme rRNA rRNA 1921 2544 -1356 1 780 5360 29 0 0 chrUextra 25614586 25615210 -3389446 - R1_DM LINE R1 -2244 3112 2489 1 780 2936 75 88 122 chrUextra 25615310 25615934 -3388722 + PROTOP_B DNA P 502 1104 -49 1 780 3085 171 10 6 chrUextra 25616034 25616658 -3387998 + SAR_DM Satellite Satellite 346 971 -501 1 780 5417 30 0 2 chrUextra 25616758 25617382 -3387274 + DMCR1A LINE CR1 1899 2521 -1949 1 780 1079 210 20 4 chrUextra 25617482 25617731 -3386925 - Stalker2_I LTR Gypsy -6859 543 291 1 780 28 48 0 0 chrUextra 25617738 25617780 -3386876 + AT_rich Low_complexity Low_complexity 1 42 0 1 780 1604 78 3 34 chrUextra 25617868 25618106 -3386550 - STALKER4_LTR LTR Gypsy -3 399 173 1 780 1341 6 0 30 chrUextra 25618331 25618498 -3386158 - NTS_DM Other Other -78 162 1 1 780 1907 17 21 13 chrUextra 25618498 25618736 -3385920 - NTS_DM Other Other 0 240 1 1 780 684 0 43 32 chrUextra 25618736 25618830 -3385826 - NTS_DM Other Other 0 240 146 1 780 291 203 0 0 chrUextra 25618930 25618994 -3385662 + XDMR Unknown Unknown 298 361 0 1 780 2592 198 5 23 chrUextra 25618939 25619554 -3385102 - SAR_DM Satellite Satellite -354 1118 515 1 780 717 13 0 0 chrUextra 25619654 25619732 -3384924 - NTS_DM Other Other -162 78 1 1 780 1899 17 17 17 chrUextra 25619732 25619972 -3384684 - NTS_DM Other Other 0 240 1 1 780 1869 17 17 21 chrUextra 25619972 25620213 -3384443 - NTS_DM Other Other 0 240 1 1 780 451 0 62 46 chrUextra 25620213 25620278 -3384378 - NTS_DM Other Other 0 240 175 1 780 5168 24 42 3 chrUextra 25620378 25621002 -3383654 + R1_DM LINE R1 3334 3981 -1375 1 780 5778 0 2 2 chrUextra 25621102 25621726 -3382930 + SSU-rRNA_Dme rRNA rRNA 558 1181 -814 1 780 3203 170 10 5 chrUextra 25621828 25622450 -3382206 + SAR_DM Satellite Satellite 246 870 -602 1 780 1664 221 15 37 chrUextra 25622550 25623150 -3381506 - Invader4_I LTR Gypsy -2785 1691 1025 1 780 5643 13 0 2 chrUextra 25623274 25623898 -3380758 + Copia2_I LTR Copia 3245 3867 -295 1 780 4663 60 71 0 chrUextra 25623998 25624620 -3380036 - DM297_I LTR Gypsy -2556 3611 2946 1 780 1292 37 0 6 chrUextra 25624739 25624904 -3379752 - NTS_DM Other Other -39 201 38 1 780 906 9 0 35 chrUextra 25624904 25625017 -3379639 - NTS_DM Other Other -107 133 25 1 780 21 57 0 0 chrUextra 25625043 25625078 -3379578 + AT_rich Low_complexity Low_complexity 1 35 0 1 780 1350 18 0 6 chrUextra 25625078 25625243 -3379413 - NTS_DM Other Other -39 201 38 1 780 875 10 10 0 chrUextra 25625243 25625344 -3379312 - NTS_DM Other Other -107 133 32 1 780 3074 169 10 14 chrUextra 25625447 25626066 -3378590 - SAR_DM Satellite Satellite -645 827 212 1 780 693 0 0 0 chrUextra 25626170 25626247 -3378409 + (TCTA)n Simple_repeat Simple_repeat 2 78 0 1 780 376 49 65 16 chrUextra 25626948 25627010 -3377646 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 780 990 173 102 15 chrUextra 25627009 25627214 -3377442 - DMLTR5 LTR Gypsy 0 266 44 1 780 2848 167 16 8 chrUextra 25628343 25628964 -3375692 + SAR_DM Satellite Satellite 1 625 -539 1 780 268 196 0 19 chrUextra 25629859 25629911 -3374745 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 780 278 176 0 19 chrUextra 25629942 25629994 -3374662 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 780 22 56 0 0 chrUextra 25630007 25630043 -3374613 + AT_rich Low_complexity Low_complexity 1 36 0 1 780 909 18 0 27 chrUextra 25630069 25630181 -3374475 + NTS_DM Other Other 25 133 -107 1 780 1330 24 0 6 chrUextra 25630181 25630346 -3374310 + NTS_DM Other Other 38 201 -39 1 780 2642 180 19 26 chrUextra 25630515 25631131 -3373525 + SAR_DM Satellite Satellite 507 1118 -354 1 780 5369 26 0 0 chrUextra 25631238 25631862 -3372794 - NINJA_I LTR Pao -4511 1500 877 1 780 5402 29 0 0 chrUextra 25631962 25632586 -3372070 - R1_DM LINE R1 -2021 3335 2712 1 780 4490 21 2 2 chrUextra 25632686 25633203 -3371453 + R1_DM LINE R1 4838 5354 -2 1 780 470 69 83 0 chrUextra 25633238 25633310 -3371346 + R1_DM LINE R1 1 78 -5278 1 780 2872 167 19 23 chrUextra 25633410 25634028 -3370628 - SAR_DM Satellite Satellite -611 861 246 1 780 2488 188 18 39 chrUextra 25634139 25634758 -3369898 - SAR_DM Satellite Satellite -353 1119 514 1 780 257 335 0 16 chrUextra 25634872 25635054 -3369602 + (CTG)n Simple_repeat Simple_repeat 2 180 0 1 780 242 342 0 0 chrUextra 25635100 25635252 -3369404 + (CTG)n Simple_repeat Simple_repeat 2 153 0 1 780 246 346 0 0 chrUextra 25635268 25635424 -3369232 + (CTG)n Simple_repeat Simple_repeat 1 156 0 1 780 5226 24 3 8 chrUextra 25636306 25636930 -3367726 - BATUMI_I LTR Pao -4532 3431 2811 1 780 1154 89 0 19 chrUextra 25637030 25637191 -3367465 + Gypsy7_I LTR Gypsy 2763 2920 -2064 1 780 4119 0 0 0 chrUextra 25637197 25637654 -3367002 + DOC LINE Jockey 625 1081 -3644 1 780 5613 22 0 0 chrUextra 25639202 25639826 -3364830 + Gypsy3_I LTR Gypsy 2591 3214 -2963 1 780 5666 8 5 0 chrUextra 25639926 25640550 -3364106 - MDG3_I LTR Gypsy -4051 935 309 1 780 1596 15 19 19 chrUextra 25640650 25640857 -3363799 + NTS_DM Other Other 34 240 0 1 780 1571 21 0 5 chrUextra 25640857 25641044 -3363612 + NTS_DM Other Other 1 186 -54 1 780 3505 42 29 7 chrUextra 25641374 25641825 -3362831 - HETA LINE telomeric -2292 3789 3329 1 780 1259 65 0 6 chrUextra 25641827 25641998 -3362658 + NINJA_I LTR Pao 5579 5748 -263 1 780 2917 181 24 10 chrUextra 25642822 25643442 -3361214 + SAR_DM Satellite Satellite 419 1047 -425 1 780 2800 186 11 22 chrUextra 25643547 25644170 -3360486 + SAR_DM Satellite Satellite 496 1111 -361 1 780 1488 22 0 0 chrUextra 25644270 25644450 -3360206 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 780 1455 67 3 3 chrUextra 25644453 25644754 -3359902 + (CTTAT)n Simple_repeat Simple_repeat 1 301 0 1 780 796 57 0 16 chrUextra 25644766 25644891 -3359765 + (CTTAT)n Simple_repeat Simple_repeat 1 123 0 1 780 553 0 0 0 chrUextra 25644993 25645052 -3359604 - LSU-rRNA_Dme rRNA rRNA -2055 1845 1787 1 780 4594 6 6 6 chrUextra 25645092 25645616 -3359040 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1268 1 780 5429 2 0 0 chrUextra 25645760 25646339 -3358317 + SSU-rRNA_Dme rRNA rRNA 1 579 -1416 1 780 2697 184 17 12 chrUextra 25646439 25647038 -3357618 - SAR_DM Satellite Satellite -676 796 195 1 780 749 95 8 8 chrUextra 25646945 25647062 -3357594 + ARS406_DM Unknown Unknown 1 117 -236 1 780 461 0 0 0 chrUextra 25647171 25647221 -3357435 - ROO_LTR LTR Pao -378 50 1 1 780 866 113 9 17 chrUextra 25647221 25647785 -3356871 - RSP Satellite Satellite -2 559 1 1 780 2920 175 8 21 chrUextra 25648612 25649231 -3355425 + SAR_DM Satellite Satellite 496 1106 -366 1 780 3768 77 10 8 chrUextra 25649337 25649954 -3354702 + G2_DM LINE Jockey 4 422 -2680 1 780 2478 104 23 23 chrUextra 25650056 25650677 -3353979 - DMSAT6 Satellite Satellite -158 621 1 1 780 2213 96 28 60 chrUextra 25650777 25651321 -3353335 + DMSAT6 Satellite Satellite 1 526 -82 1 780 2009 184 16 10 chrUextra 25651514 25651933 -3352723 + SAR_DM Satellite Satellite 1 568 -602 1 780 1084 101 0 0 chrUextra 25651933 25652091 -3352565 - ARS406_DM Unknown Unknown -195 158 1 1 780 2009 184 16 10 chrUextra 25652091 25652122 -3352534 + SAR_DM Satellite Satellite 569 612 -558 1 780 4718 62 0 5 chrUextra 25652949 25653569 -3351087 - BATUMI_I LTR Pao -6 7957 7341 1 780 2967 162 45 11 chrUextra 25653673 25654291 -3350365 + SAR_DM Satellite Satellite 378 1016 -456 1 780 5511 8 2 0 chrUextra 25654392 25655015 -3349641 + STALKER4_I LTR Gypsy 3218 3841 -2689 1 780 1522 0 0 11 chrUextra 25656281 25656461 -3348195 + (TTGTG)n Simple_repeat Simple_repeat 3 180 0 1 780 2432 102 11 31 chrUextra 25656564 25657184 -3347472 - DMSAT6 Satellite Satellite -94 607 1 1 780 2532 95 16 35 chrUextra 25657284 25657906 -3346750 + DMSAT6 Satellite Satellite 1 610 -285 1 780 3434 0 0 0 chrUextra 25658007 25658378 -3346278 + NOMAD_LTR LTR Gypsy 148 518 0 1 780 1533 16 0 0 chrUextra 25658387 25658630 -3346026 + (TTATA)n Simple_repeat Simple_repeat 1 243 0 1 780 5745 0 2 2 chrUextra 25658730 25659353 -3345303 - ROO_I LTR Pao -5490 2766 2144 1 780 2303 0 3 82 chrUextra 25659453 25659746 -3344910 - LSU-rRNA_Dme rRNA rRNA -3630 270 1 1 780 21 95 0 0 chrUextra 25659758 25659821 -3344835 + AT_rich Low_complexity Low_complexity 1 63 0 1 780 34 24 0 0 chrUextra 25660034 25660075 -3344581 + AT_rich Low_complexity Low_complexity 1 41 0 1 780 4562 35 18 0 chrUextra 25660178 25660723 -3343933 + MAX_I LTR Pao 2690 3244 -4670 1 780 592 29 0 0 chrUextra 25660724 25660792 -3343864 + MAX_I LTR Pao 3433 3500 -4414 1 780 3119 169 14 5 chrUextra 25660899 25661522 -3343134 + SAR_DM Satellite Satellite 409 1037 -435 1 780 198 71 0 0 chrUextra 25661622 25661650 -3343006 + (TTCTC)n Simple_repeat Simple_repeat 3 30 0 1 780 5226 16 3 23 chrUextra 25663068 25663688 -3340968 - BATUMI_I LTR Pao -5980 1983 1376 1 780 1691 0 0 0 chrUextra 25663791 25663972 -3340684 - TABOR_LTR LTR Gypsy -325 181 1 1 780 2594 56 2 42 chrUextra 25663970 25664414 -3340242 - TABOR_I LTR Gypsy 0 6336 5789 1 780 195 139 0 0 chrUextra 25664604 25664640 -3340016 + (GA)n Simple_repeat Simple_repeat 2 37 0 1 780 186 71 0 0 chrUextra 25665064 25665092 -3339564 + (TTGG)n Simple_repeat Simple_repeat 4 31 0 1 780 5570 10 0 2 chrUextra 25665237 25665860 -3338796 + R1_DM LINE R1 2229 2850 -2506 1 780 5213 24 0 0 chrUextra 25665960 25666583 -3338073 + ACCORD2_I LTR Gypsy 6318 6940 -272 1 780 1055 24 0 0 chrUextra 25666683 25666806 -3337850 - HETA LINE telomeric -3320 2761 2639 1 780 4218 29 2 0 chrUextra 25666818 25667306 -3337350 - HETA LINE telomeric -4052 2029 1541 1 780 2502 173 14 31 chrUextra 25667406 25668026 -3336630 + SAR_DM Satellite Satellite 509 1118 -354 1 780 1539 0 0 0 chrUextra 25668129 25668300 -3336356 + (GAGAA)n Simple_repeat Simple_repeat 4 174 0 1 780 5145 13 0 2 chrUextra 25670298 25670921 -3333735 + R1_DM LINE R1 2482 3103 -2253 1 780 5164 13 10 0 chrUextra 25671021 25671644 -3333012 + FW_DM LINE Jockey 2451 3079 -1613 1 780 1746 195 93 51 chrUextra 25671750 25672355 -3332301 + TAHRE LINE telomeric 9352 9957 -506 1 780 796 0 0 0 chrUextra 25672467 25672559 -3332097 + MDG3_I LTR Gypsy 4895 4986 0 1 780 2020 26 4 50 chrUextra 25672559 25672839 -3331817 + MDG3_LTR LTR Gypsy 1 267 0 1 780 2039 12 0 0 chrUextra 25672839 25673088 -3331568 - FW_DM LINE Jockey -2929 1763 1515 1 780 5122 29 0 0 chrUextra 25673190 25673813 -3330843 + MAX_I LTR Pao 4143 4765 -3149 1 780 3266 22 22 0 chrUextra 25673913 25674320 -3330336 + R1_DM LINE R1 4651 5066 -290 1 780 943 35 0 0 chrUextra 25674317 25674431 -3330225 + R1_DM LINE R1 5243 5356 0 1 780 385 83 167 0 chrUextra 25674464 25674536 -3330120 + R1_DM LINE R1 1 84 -5272 1 780 948 87 96 77 chrUextra 25674636 25674912 -3329744 - TAHRE LINE telomeric -120 10343 10186 1 780 2142 78 134 0 chrUextra 25674915 25675259 -3329397 - TART LINE telomeric -6638 7839 7450 1 780 1193 72 0 6 chrUextra 25675359 25675526 -3329130 - HMSBEAGLE_I LTR Gypsy -4856 1673 1508 1 780 791 189 0 0 chrUextra 25675528 25675671 -3328985 - HMSBEAGLE_I LTR Gypsy -5175 1354 1212 1 780 371 68 17 0 chrUextra 25675783 25675842 -3328814 + (TA)n Simple_repeat Simple_repeat 2 61 0 1 780 488 119 36 0 chrUextra 25676164 25676248 -3328408 - NTS_DM Other Other -150 90 4 1 780 1301 6 0 18 chrUextra 25676358 25676523 -3328133 - NTS_DM Other Other -78 162 1 1 780 1271 11 22 16 chrUextra 25676523 25676705 -3327951 - NTS_DM Other Other 0 240 58 1 780 3652 149 0 3 chrUextra 25676807 25677428 -3327228 - Gypsy5_I LTR Gypsy -2754 3755 3137 1 780 1365 300 16 18 chrUextra 25677528 25678142 -3326514 - G6_DM LINE Jockey -1068 974 362 1 780 2792 152 15 13 chrUextra 25678251 25678858 -3325798 - SAR_DM Satellite Satellite -539 933 326 1 780 3515 46 44 3 chrUextra 25678974 25679597 -3325059 + PROTOP DNA P 201 753 -3727 1 780 3060 156 8 10 chrUextra 25679697 25680320 -3324336 + SAR_DM Satellite Satellite 410 1031 -441 1 780 2331 101 10 8 chrUextra 25680420 25681043 -3323613 - DMSAT6 Satellite Satellite -254 623 1 1 780 3303 6 173 0 chrUextra 25681143 25681657 -3322999 + MDG1_I LTR Gypsy 6007 6799 -98 1 780 423 100 0 0 chrUextra 25681661 25681731 -3322925 + (TAA)n Simple_repeat Simple_repeat 3 72 0 1 780 294 0 0 0 chrUextra 25681731 25681766 -3322890 + MDG1_LTR LTR Gypsy 87 121 -321 1 780 2813 166 13 10 chrUextra 25681868 25682489 -3322167 - SAR_DM Satellite Satellite -549 923 301 1 780 4956 35 2 2 chrUextra 25682589 25683210 -3321446 - R1_DM LINE R1 -3349 2007 1387 1 780 2956 0 3 0 chrUextra 25683312 25683652 -3321004 - Invader1_LTR LTR Gypsy -82 341 1 1 780 2214 11 7 3 chrUextra 25683652 25683935 -3320721 - Invader1_I LTR Gypsy 0 3186 2903 1 780 5273 6 0 0 chrUextra 25684035 25684658 -3319998 - MDG3_I LTR Gypsy -1310 3676 3054 1 780 3922 87 2 42 chrUextra 25684758 25685381 -3319275 + Gypsy12_I LTR Gypsy 646 1243 -4303 1 780 245 136 0 22 chrUextra 25685481 25685526 -3319130 - DMLTR5 LTR Gypsy -179 87 44 1 780 321 274 107 89 chrUextra 25685735 25686015 -3318641 + Invader1_LTR LTR Gypsy 84 368 -55 1 780 5041 10 21 3 chrUextra 25686204 25686827 -3317829 + Invader2_I LTR Gypsy 422 1055 -3537 1 780 624 143 250 7 chrUextra 25687243 25687391 -3317265 - DNAREP1_DM LINE Penelope -388 206 23 1 780 213 39 0 0 chrUextra 25687391 25687417 -3317239 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 1 780 2174 104 13 34 chrUextra 25687650 25688273 -3316383 - DMSAT6 Satellite Satellite -181 609 1 1 780 647 73 0 0 chrUextra 25688373 25688469 -3316187 + ARS406_DM Unknown Unknown 63 158 -195 1 780 2567 159 6 6 chrUextra 25688476 25688996 -3315660 - SAR_DM Satellite Satellite -569 903 384 1 780 2565 178 8 10 chrUextra 25689097 25689694 -3314962 - SAR_DM Satellite Satellite -682 790 195 1 780 680 120 0 0 chrUextra 25689601 25689718 -3314938 + ARS406_DM Unknown Unknown 1 117 -236 1 97 1615 169 25 8 chrUextra 25689841 25690442 -3314214 + SAR_DM Satellite Satellite 1 611 -569 1 781 1355 71 0 0 chrUextra 25690542 25690725 -3313931 + CIRCE LINE Composite 1700 1882 -4474 1 781 596 304 34 55 chrUextra 25690721 25691139 -3313517 + Gypsy12_I LTR Gypsy 3822 4230 -1316 1 781 2783 31 6 19 chrUextra 25690804 25691164 -3313492 + CIRCE LINE Composite 1888 2242 -4114 1 781 2530 182 8 10 chrUextra 25691265 25691863 -3312793 - SAR_DM Satellite Satellite -684 788 192 1 781 790 91 0 0 chrUextra 25691767 25691888 -3312768 + ARS406_DM Unknown Unknown 1 121 -232 1 781 2847 179 7 3 chrUextra 25691989 25692607 -3312049 + SAR_DM Satellite Satellite 272 891 -581 1 781 2651 189 11 5 chrUextra 25692711 25693334 -3311322 - SAR_DM Satellite Satellite -593 879 253 1 781 684 0 0 0 chrUextra 25693434 25693510 -3311146 + (CTAG)n Simple_repeat Simple_repeat 1 76 0 1 781 864 0 0 0 chrUextra 25693510 25693605 -3311051 + (CTATG)n Simple_repeat Simple_repeat 1 96 0 1 781 1587 22 0 0 chrUextra 25693605 25693964 -3310692 + (CTAG)n Simple_repeat Simple_repeat 1 359 0 1 781 401 33 0 11 chrUextra 25693964 25694057 -3310599 + (TCTA)n Simple_repeat Simple_repeat 1 91 0 1 781 2832 37 0 0 chrUextra 25694157 25694507 -3310149 - R1_DM LINE R1 -3605 1751 1402 1 781 2151 57 3 0 chrUextra 25694498 25694780 -3309876 - R1_DM LINE R1 -3897 1459 1177 1 781 680 113 0 0 chrUextra 25694882 25694997 -3309659 - ARS406_DM Unknown Unknown -224 129 15 1 781 1705 120 70 0 chrUextra 25694997 25695297 -3309359 + MAX_LTR LTR Pao 1 321 0 1 781 1238 22 5 131 chrUextra 25695297 25695503 -3309153 + MAX_I LTR Pao 1 180 -7734 1 781 402 0 19 0 chrUextra 25695603 25695655 -3309001 + Invader4_I LTR Gypsy 2361 2413 0 1 781 3004 6 0 0 chrUextra 25695655 25696001 -3308655 + Invader4_LTR LTR Gypsy 1 346 0 1 781 4192 69 8 2 chrUextra 25696326 25696949 -3307707 - I_DM LINE I -1685 4546 3920 1 781 24 53 0 0 chrUextra 25697049 25697087 -3307569 + AT_rich Low_complexity Low_complexity 1 38 0 1 781 488 119 36 0 chrUextra 25697360 25697444 -3307212 - NTS_DM Other Other -150 90 4 1 781 806 9 8 34 chrUextra 25697554 25697672 -3306984 - NTS_DM Other Other -78 162 48 1 781 5438 3 0 0 chrUextra 25697772 25698395 -3306261 + LSU-rRNA_Dme rRNA rRNA 2593 3215 -685 1 781 5329 2 2 0 chrUextra 25698495 25699118 -3305538 - R1_DM LINE R1 -1806 3550 2927 1 781 2453 190 8 10 chrUextra 25699219 25699815 -3304841 + SAR_DM Satellite Satellite 473 1067 -405 1 781 5099 2 2 0 chrUextra 25699941 25700529 -3304127 - LSU-rRNA_Dme rRNA rRNA -1524 2376 1788 1 781 2857 170 8 5 chrUextra 25700668 25701278 -3303378 - SAR_DM Satellite Satellite -535 937 326 1 781 5173 0 0 2 chrUextra 25701387 25702010 -3302646 + ROO_I LTR Pao 2868 3489 -4767 1 781 4678 35 2 23 chrUextra 25702125 25702732 -3301924 - Baggins1 LINE LOA 0 5453 4860 1 781 2950 109 12 8 chrUextra 25702832 25703454 -3301202 + G2_DM LINE Jockey 4 371 -2731 1 781 427 248 111 38 chrUextra 25703852 25704167 -3300489 + G6_DM LINE Jockey 243 580 -1462 1 781 5052 18 0 3 chrUextra 25704998 25705620 -3299036 + NINJA_I LTR Pao 352 971 -5040 1 781 548 16 0 0 chrUextra 25705720 25705784 -3298872 - NTS_DM Other Other -176 64 1 1 781 1408 20 20 20 chrUextra 25705784 25705987 -3298669 - NTS_DM Other Other 0 240 38 1 781 795 10 0 0 chrUextra 25705987 25706083 -3298573 - NTS_DM Other Other -107 133 38 1 781 811 19 9 27 chrUextra 25706083 25706194 -3298462 - NTS_DM Other Other -107 133 25 1 781 21 57 0 0 chrUextra 25706220 25706255 -3298401 + AT_rich Low_complexity Low_complexity 1 35 0 1 781 553 35 0 11 chrUextra 25706255 25706342 -3298314 - NTS_DM Other Other -39 201 116 1 781 2918 169 8 8 chrUextra 25706442 25707064 -3297592 - SAR_DM Satellite Satellite -430 1042 421 1 781 4653 2 0 2 chrUextra 25707164 25707703 -3296953 + LSU-rRNA_Dme rRNA rRNA 2095 2632 -1268 1 781 686 0 12 0 chrUextra 25707703 25707786 -3296870 + R1_DM LINE R1 1 84 -5272 1 781 2724 174 10 8 chrUextra 25707886 25708499 -3296157 + SAR_DM Satellite Satellite 288 901 -571 1 781 5031 24 0 0 chrUextra 25708608 25709230 -3295426 - G2_DM LINE Jockey -447 2655 2034 1 781 4664 27 6 0 chrUextra 25709330 25709952 -3294704 + PROTOP_A DNA P 231 856 -249 1 781 5288 0 0 3 chrUextra 25710052 25710674 -3293982 - R1_DM LINE R1 -2030 3326 2707 1 781 4969 26 0 5 chrUextra 25712218 25712840 -3291816 + DMRT1B LINE R1 4161 4779 -404 1 781 2614 213 12 5 chrUextra 25712941 25713507 -3291149 - HMSBEAGLE_I LTR Gypsy -3538 2991 2422 1 781 2762 178 13 5 chrUextra 25713662 25714284 -3290372 + SAR_DM Satellite Satellite 224 850 -622 1 781 2858 165 11 10 chrUextra 25714384 25715002 -3289654 + SAR_DM Satellite Satellite 419 1037 -435 1 781 850 105 86 6 chrUextra 25715565 25715728 -3288928 - DMSAT6 Satellite Satellite -251 219 44 1 781 2740 172 8 11 chrUextra 25715828 25716444 -3288212 + SAR_DM Satellite Satellite 416 1029 -443 1 781 230 59 0 0 chrUextra 25716550 25716584 -3288072 + ARS406_DM Unknown Unknown 126 159 -194 1 781 2604 169 16 7 chrUextra 25716590 25717163 -3287493 - SAR_DM Satellite Satellite -569 903 326 1 781 2778 169 24 10 chrUextra 25717272 25717894 -3286762 - SAR_DM Satellite Satellite -457 1015 385 1 781 2874 216 2 2 chrUextra 25718716 25719338 -3285318 + Gypsy6_I LTR Gypsy 4362 4983 -2029 1 781 5267 6 10 0 chrUextra 25719438 25720060 -3284596 - DOC2_DM LINE Jockey -2421 2372 1745 1 781 2286 18 4 0 chrUextra 25720163 25720440 -3284216 + R1_DM LINE R1 4789 5066 -290 1 781 917 44 0 0 chrUextra 25720437 25720551 -3284105 + R1_DM LINE R1 5243 5356 0 1 781 1396 71 10 0 chrUextra 25720584 25720782 -3283874 + R1_DM LINE R1 1 200 -5156 1 781 2810 65 7 17 chrUextra 25721664 25722069 -3282587 - Baggins1 LINE LOA -262 5191 4791 1 781 366 318 24 24 chrUextra 25722606 25722945 -3281711 + TIRANT_I LTR Gypsy 3586 3735 -3957 1 781 1013 77 8 20 chrUextra 25723048 25723670 -3280986 + RSP Satellite Satellite 1 614 0 1 781 5283 20 11 21 chrUextra 25723770 25724392 -3280264 + FW_DM LINE Jockey 1916 2531 -2161 1 781 4658 44 2 2 chrUextra 25724492 25725061 -3279595 - R1_DM LINE R1 -4150 1206 638 1 781 395 73 0 0 chrUextra 25725059 25725114 -3279542 - R1_DM LINE R1 -5188 168 114 1 781 3001 165 20 8 chrUextra 25725219 25725829 -3278827 + SAR_DM Satellite Satellite 321 937 -535 1 781 5296 32 0 2 chrUextra 25725939 25726557 -3278099 - R1_DM LINE R1 -2630 2726 2110 1 781 952 0 0 0 chrUextra 25726658 25726761 -3277895 - MICROPIA_LTR LTR Gypsy -373 103 1 1 781 3586 13 0 4 chrUextra 25726761 25727280 -3277376 - MICROPIA_I LTR Gypsy 0 4476 3896 1 781 5618 8 11 0 chrUextra 25727380 25728002 -3276654 + R1_DM LINE R1 1369 1997 -3359 1 781 5556 14 0 0 chrUextra 25728102 25728724 -3275932 + TRANSIB2 DNA Transib 839 1460 -1384 1 781 5471 0 0 2 chrUextra 25728824 25729446 -3275210 + ROO_I LTR Pao 4622 5242 -3014 1 781 2670 92 23 13 chrUextra 25729547 25730167 -3274489 - DMSAT6 Satellite Satellite -414 626 1 1 781 292 149 70 60 chrUextra 25730268 25730368 -3274288 + XDMR_DM Unknown Unknown 260 360 0 1 781 2643 174 16 23 chrUextra 25730283 25730890 -3273766 - SAR_DM Satellite Satellite -354 1118 516 1 781 626 21 41 41 chrUextra 25730992 25731090 -3273566 + NTS_DM Other Other 143 240 0 1 781 1858 21 17 17 chrUextra 25731090 25731330 -3273326 + NTS_DM Other Other 1 240 0 1 781 1954 8 17 13 chrUextra 25731330 25731569 -3273087 + NTS_DM Other Other 1 240 0 1 781 400 0 0 0 chrUextra 25731569 25731612 -3273044 + NTS_DM Other Other 1 43 -197 1 781 2634 58 3 0 chrUextra 25732005 25732332 -3272324 + Baggins1 LINE LOA 4791 5118 -335 1 781 1121 92 0 7 chrUextra 25732434 25732587 -3272069 + Gypsy12_I LTR Gypsy 825 976 -4570 1 781 455 273 0 0 chrUextra 25732594 25732716 -3271940 + DM297_I LTR Gypsy 3337 3458 -2709 1 781 1545 194 18 29 chrUextra 25732716 25733056 -3271600 + Gypsy12_LTR LTR Gypsy 1 336 -2000 1 781 996 239 26 35 chrUextra 25733240 25733778 -3270878 - Gypsy11_I LTR Gypsy -140 3384 3074 1 781 1735 19 0 5 chrUextra 25733886 25734093 -3270563 - NTS_DM Other Other -34 206 1 1 781 1854 21 17 17 chrUextra 25734093 25734333 -3270323 - NTS_DM Other Other 0 240 1 1 781 1121 31 24 24 chrUextra 25734333 25734500 -3270156 - NTS_DM Other Other 0 240 74 1 781 5515 8 3 8 chrUextra 25735322 25735944 -3268712 - BATUMI_I LTR Pao -5356 2607 1989 1 781 2882 184 14 8 chrUextra 25736046 25736666 -3267990 + SAR_DM Satellite Satellite 369 992 -480 1 781 5263 2 3 5 chrUextra 25736766 25737388 -3267268 + TABOR_I LTR Gypsy 5472 6092 -244 1 781 2980 179 7 8 chrUextra 25737488 25738107 -3266549 + SAR_DM Satellite Satellite 305 922 -550 1 781 4039 30 0 2 chrUextra 25738210 25738687 -3265969 - NINJA_I LTR Pao -67 5944 5469 1 781 1276 14 0 7 chrUextra 25738687 25738832 -3265824 + PROTOP_A DNA P 1 144 -961 1 781 2622 111 131 6 chrUextra 25738936 25739554 -3265102 - TART LINE telomeric -6799 7678 7191 1 781 532 119 36 0 chrUextra 25739690 25739774 -3264882 - NTS_DM Other Other -150 90 4 1 781 1375 6 0 18 chrUextra 25739884 25740049 -3264607 - NTS_DM Other Other -78 162 1 1 781 1829 13 18 13 chrUextra 25740049 25740276 -3264380 - NTS_DM Other Other 0 240 13 1 781 5553 16 0 2 chrUextra 25740376 25740998 -3263658 - R1_DM LINE R1 -2964 2392 1772 1 781 2577 88 34 40 chrUextra 25741098 25741720 -3262936 - DMSAT6 Satellite Satellite -94 617 1 1 781 2177 159 25 21 chrUextra 25741821 25742442 -3262214 - SAR_DM Satellite Satellite -800 623 1 1 781 405 273 0 22 chrUextra 25742637 25743156 -3261500 + (CAA)n Simple_repeat Simple_repeat 1 507 0 1 781 3101 174 5 8 chrUextra 25743264 25743883 -3260773 + SAR_DM Satellite Satellite 440 1056 -416 1 781 2379 4 0 0 chrUextra 25744352 25744608 -3260048 + ROO_LTR LTR Pao 1 256 -172 1 781 3813 12 2 0 chrUextra 25744708 25745131 -3259525 + R1_DM LINE R1 4933 5356 0 1 781 1172 84 18 0 chrUextra 25745164 25745330 -3259326 + R1_DM LINE R1 1 169 -5187 1 781 956 102 8 22 chrUextra 25745434 25746052 -3258604 - RSP Satellite Satellite -11 609 1 1 781 2673 188 13 7 chrUextra 25746152 25746758 -3257898 - SAR_DM Satellite Satellite -683 789 180 1 781 824 98 0 0 chrUextra 25746652 25746774 -3257882 + ARS406_DM Unknown Unknown 1 122 -231 1 781 1524 42 0 3 chrUextra 25746874 25747449 -3257207 + (CTTAT)n Simple_repeat Simple_repeat 1 573 0 1 781 294 106 0 0 chrUextra 25747449 25747496 -3257160 + (CATCT)n Simple_repeat Simple_repeat 3 49 0 1 781 639 0 0 0 chrUextra 25747604 25747675 -3256981 + (TTCTC)n Simple_repeat Simple_repeat 2 72 0 1 781 828 320 22 24 chrUextra 25748334 25748792 -3255864 + MICROPIA_I LTR Gypsy 257 710 -3389 1 781 5790 2 0 0 chrUextra 25749040 25749661 -3254995 + Gypsy4_I LTR Gypsy 2447 3067 -3221 1 781 3057 176 10 3 chrUextra 25749762 25750382 -3254274 + SAR_DM Satellite Satellite 256 879 -593 1 781 5178 15 20 3 chrUextra 25750484 25751084 -3253572 - R1_DM LINE R1 -1032 4324 3715 1 781 810 0 0 0 chrUextra 25751206 25751296 -3253360 + (TCTTG)n Simple_repeat Simple_repeat 1 90 0 1 781 1443 18 6 0 chrUextra 25751928 25752091 -3252565 - DIVER_I LTR Pao -2197 3446 3283 1 781 3403 38 0 2 chrUextra 25752121 25752521 -3252135 - STALKER4_LTR LTR Gypsy -3 399 1 1 781 259 0 0 0 chrUextra 25752521 25752550 -3252106 - STALKER4_I LTR Gypsy 0 6530 6502 1 781 2988 97 42 119 chrUextra 25752652 25753181 -3251475 + Gypsy12_I LTR Gypsy 1334 1821 -3725 1 781 522 96 277 0 chrUextra 25753178 25753272 -3251384 + Gypsy12_I LTR Gypsy 4465 4584 -962 1 781 1220 61 0 6 chrUextra 25753372 25753552 -3251104 + (ATAAG)n Simple_repeat Simple_repeat 1 179 0 1 781 960 111 0 0 chrUextra 25753552 25753731 -3250925 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 781 287 152 0 12 chrUextra 25753735 25753772 -3250884 + polypurine Low_complexity Low_complexity 5 41 0 1 781 1071 94 0 0 chrUextra 25753772 25753952 -3250704 + (ATAAG)n Simple_repeat Simple_repeat 1 180 0 1 781 287 152 0 12 chrUextra 25753952 25753994 -3250662 + polypurine Low_complexity Low_complexity 42 83 0 1 781 5422 26 0 0 chrUextra 25754094 25754716 -3249940 - R1_DM LINE R1 -2069 3287 2666 1 781 3158 0 0 0 chrUextra 25754816 25755201 -3249455 + HMSBEAGLE_I LTR Gypsy 403 787 -5742 1 781 764 38 45 15 chrUextra 25755217 25755351 -3249305 + (TTA)n Simple_repeat Simple_repeat 3 140 0 1 781 790 0 0 0 chrUextra 25755351 25755438 -3249218 + HMSBEAGLE_I LTR Gypsy 976 1062 -5467 1 781 5216 16 0 10 chrUextra 25756260 25756882 -3247774 + IDEFIX_I LTR Gypsy 2760 3375 -2253 1 781 5674 6 2 0 chrUextra 25756982 25757604 -3247052 - R1_DM LINE R1 -371 4985 4363 1 781 3003 171 10 11 chrUextra 25759148 25759770 -3244886 + SAR_DM Satellite Satellite 402 1022 -450 1 781 519 150 10 20 chrUextra 25759874 25759976 -3244680 + DMTOM1_LTR LTR Gypsy 310 410 0 1 781 398 114 14 28 chrUextra 25759976 25760039 -3244617 + DMTOM1_LTR LTR Gypsy 349 410 0 1 781 232 256 46 15 chrUextra 25760288 25760419 -3244237 + A-rich Low_complexity Low_complexity 2 136 0 1 781 1552 55 35 0 chrUextra 25760592 25760792 -3243864 + R1_DM LINE R1 406 612 -4744 1 781 2870 32 3 11 chrUextra 25760777 25761128 -3243528 + R1_DM LINE R1 830 1177 -4179 1 781 725 67 0 0 chrUextra 25761125 25761214 -3243442 + R1_DM LINE R1 1328 1416 -3940 1 781 1852 195 65 13 chrUextra 25761314 25761919 -3242737 - SAR_DM Satellite Satellite -854 636 1 1 781 3914 0 0 0 chrUextra 25762238 25762658 -3241998 + NOMAD_LTR LTR Gypsy 1 420 -98 1 781 3603 15 2 25 chrUextra 25762758 25763379 -3241277 + HETRP_DM Satellite Satellite 1 606 -1284 1 781 729 0 0 0 chrUextra 25763479 25763560 -3241096 + (GAGAA)n Simple_repeat Simple_repeat 2 82 0 1 781 2303 169 6 5 chrUextra 25764200 25764821 -3239835 - SAR_DM Satellite Satellite -614 621 1 1 781 998 52 0 0 chrUextra 25764934 25765050 -3239606 + R1_DM LINE R1 5241 5356 0 1 781 3586 64 4 4 chrUextra 25765083 25765541 -3239115 + R1_DM LINE R1 1 458 -4898 1 781 5686 2 2 3 chrUextra 25765642 25766263 -3238393 + SSU-rRNA_Dme rRNA rRNA 878 1497 -498 1 781 2606 92 10 31 chrUextra 25766363 25766984 -3237672 - DMSAT6 Satellite Satellite -88 608 1 1 781 3647 265 26 31 chrUextra 25767084 25768426 -3236230 + SAR_DM Satellite Satellite 1 1335 -203 1 781 2946 172 11 8 chrUextra 25768529 25769139 -3235517 - SAR_DM Satellite Satellite -615 857 246 1 781 291 125 0 0 chrUextra 25769099 25769147 -3235509 + ARS406_DM Unknown Unknown 1 48 -305 1 781 673 0 0 0 chrUextra 25769247 25769320 -3235336 - NTS_DM Other Other -130 110 38 1 781 890 9 9 27 chrUextra 25769320 25769431 -3235225 - NTS_DM Other Other -107 133 25 1 781 21 57 0 0 chrUextra 25769458 25769493 -3235163 + AT_rich Low_complexity Low_complexity 1 35 0 1 781 1332 18 0 6 chrUextra 25769493 25769658 -3234998 - NTS_DM Other Other -39 201 38 1 781 928 9 0 27 chrUextra 25769658 25769770 -3234886 - NTS_DM Other Other -107 133 25 1 781 365 22 0 0 chrUextra 25769822 25769867 -3234789 - NTS_DM Other Other -39 201 157 1 781 5576 10 0 0 chrUextra 25769968 25770589 -3234067 + DMRT1B LINE R1 342 962 -4221 1 781 4770 29 5 52 chrUextra 25771410 25772027 -3232629 - BATUMI_I LTR Pao -5311 2652 2065 1 781 5135 23 2 11 chrUextra 25772131 25772752 -3231904 - R1_DM LINE R1 -1220 4136 3522 1 781 5146 21 2 16 chrUextra 25772852 25773473 -3231183 + BATUMI_I LTR Pao 2725 3336 -4627 1 781 5556 2 7 3 chrUextra 25773573 25774193 -3230463 + LSU-rRNA_Dme rRNA rRNA 1147 1768 -2132 1 781 3665 5 0 2 chrUextra 25774323 25774726 -3229930 - STALKER4_LTR LTR Gypsy 0 402 1 1 781 1266 93 0 0 chrUextra 25774726 25774909 -3229747 + ARS406_DM Unknown Unknown 7 189 -164 1 781 3093 123 40 21 chrUextra 25775015 25775636 -3229020 - TART_B1 LINE telomeric -8216 2438 1806 1 781 356 0 0 0 chrUextra 25775736 25775781 -3228875 + NTS_DM Other Other 89 133 -107 1 781 1507 20 20 20 chrUextra 25775781 25775984 -3228672 + NTS_DM Other Other 38 240 0 1 781 1837 25 17 17 chrUextra 25775984 25776224 -3228432 + NTS_DM Other Other 1 240 0 1 781 1203 8 0 0 chrUextra 25776224 25776357 -3228299 + NTS_DM Other Other 1 133 -107 1 781 2519 109 8 41 chrUextra 25776457 25777063 -3227593 - DMSAT6 Satellite Satellite -17 585 1 1 781 618 267 199 13 chrUextra 25777406 25777789 -3226867 + TV1I LTR Gypsy 378 828 -5232 1 781 21 0 0 0 chrUextra 25777986 25778007 -3226649 + AT_rich Low_complexity Low_complexity 1 21 0 1 781 866 84 113 0 chrUextra 25778378 25778520 -3226136 + DNAREP1_DM LINE Penelope 3 160 -434 1 781 2665 177 11 8 chrUextra 25778620 25779240 -3225416 + SAR_DM Satellite Satellite 206 827 -645 1 781 2549 186 11 14 chrUextra 25779345 25779962 -3224694 + SAR_DM Satellite Satellite 1 615 -396 1 781 4647 27 0 5 chrUextra 25780089 25780683 -3223973 - CIRCE LINE Composite -1376 4980 4390 1 781 714 288 44 44 chrUextra 25780783 25781402 -3223254 - SAR_DM Satellite Satellite -856 619 1 1 781 933 84 6 18 chrUextra 25781507 25782115 -3222541 - RSP Satellite Satellite -71 601 1 1 781 492 174 0 0 chrUextra 25782946 25783038 -3221618 - BS2 LINE Jockey -1909 2812 2721 1 781 1432 156 90 17 chrUextra 25783039 25783385 -3221271 - MDG1_LTR LTR Gypsy -30 412 42 1 781 1479 28 0 0 chrUextra 25783385 25783565 -3221091 + (TTA)n Simple_repeat Simple_repeat 1 180 0 1 781 2452 4 0 0 chrUextra 25783667 25783948 -3220708 + R1_DM LINE R1 5076 5356 0 1 781 2816 3 0 0 chrUextra 25783960 25784288 -3220368 + R1_DM LINE R1 3231 3558 -1798 1 781 2686 182 10 8 chrUextra 25784388 25785008 -3219648 + SAR_DM Satellite Satellite 388 1008 -464 1 781 2385 108 0 0 chrUextra 25785110 25785454 -3219202 + NOMAD_I LTR Gypsy 4126 4469 -2103 1 781 2342 21 0 0 chrUextra 25785451 25785730 -3218926 - Baggins1 LINE LOA -1 5452 5174 1 781 5312 0 2 5 chrUextra 25785830 25786451 -3218205 - SSU-rRNA_Dme rRNA rRNA -682 1313 695 1 781 4162 55 161 3 chrUextra 25786551 25787172 -3217484 + TART_B1 LINE telomeric 2669 3387 -7267 1 781 2785 163 18 8 chrUextra 25787275 25787893 -3216763 - SAR_DM Satellite Satellite -581 891 268 1 781 4947 3 5 5 chrUextra 25788019 25788614 -3216042 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1194 1 781 5028 5 0 2 chrUextra 25788714 25789299 -3215357 - LSU-rRNA_Dme rRNA rRNA -1529 2371 1788 1 781 1358 88 0 15 chrUextra 25790177 25790374 -3214282 - PROTOP_B DNA P 0 1153 960 1 781 342 222 11 109 chrUextra 25790538 25790769 -3213887 + Gypsy_LTR LTR Gypsy 29 215 -267 1 781 2411 65 32 20 chrUextra 25791598 25792219 -3212437 + PROTOP_A DNA P 527 1020 -85 1 781 1454 258 52 45 chrUextra 25792339 25792916 -3211740 - Gypsy12_LTR LTR Gypsy -1564 772 192 1 781 561 138 0 18 chrUextra 25793040 25793151 -3211505 - ARS406_DM Unknown Unknown -244 109 1 1 781 2450 186 10 15 chrUextra 25793056 25793661 -3210995 + SAR_DM Satellite Satellite 195 796 -676 1 781 837 173 74 48 chrUextra 25793765 25794074 -3210582 - TAHRE LINE telomeric -10127 336 20 1 781 976 119 0 6 chrUextra 25794110 25794271 -3210385 - TART LINE telomeric -3814 10663 10504 1 781 455 189 82 0 chrUextra 25794260 25794382 -3210274 - TART LINE telomeric -4205 10272 10141 1 781 2745 184 15 19 chrUextra 25794482 25795103 -3209553 - SAR_DM Satellite Satellite -545 618 1 1 781 5382 0 2 2 chrUextra 25795203 25795822 -3208834 + SSU-rRNA_Dme rRNA rRNA 1377 1995 0 1 781 5308 0 2 5 chrUextra 25795924 25796545 -3208111 - SSU-rRNA_Dme rRNA rRNA -499 1496 878 1 781 5187 14 2 0 chrUextra 25796645 25797266 -3207390 + R1_DM LINE R1 2055 2676 -2680 1 781 1626 31 66 0 chrUextra 25797366 25797592 -3207064 + IDEFIX_I LTR Gypsy 5232 5472 -156 1 781 3180 25 8 0 chrUextra 25797591 25797987 -3206669 + DIVER2_I LTR Pao 544 942 -3205 1 781 40 59 0 0 chrUextra 25798142 25798210 -3206446 + AT_rich Low_complexity Low_complexity 1 68 0 1 781 1116 0 0 0 chrUextra 25798584 25798708 -3205948 + (TA)n Simple_repeat Simple_repeat 2 125 0 1 781 28 48 0 0 chrUextra 25798927 25798969 -3205687 + AT_rich Low_complexity Low_complexity 1 42 0 1 781 32 0 0 0 chrUextra 25799300 25799332 -3205324 + AT_rich Low_complexity Low_complexity 1 32 0 1 781 2815 161 13 8 chrUextra 25799541 25800150 -3204506 + SAR_DM Satellite Satellite 326 937 -535 1 781 2990 184 47 0 chrUextra 25800253 25800871 -3203785 - IDEFIX_I LTR Gypsy -4480 1148 502 1 781 2697 182 10 5 chrUextra 25800974 25801592 -3203064 - SAR_DM Satellite Satellite -549 923 303 1 781 2757 158 18 15 chrUextra 25801692 25802300 -3202356 - SAR_DM Satellite Satellite -494 978 369 1 781 5168 11 0 0 chrUextra 25802413 25803034 -3201622 + DMRT1B LINE R1 854 1474 -3709 1 781 2959 0 6 6 chrUextra 25803134 25803490 -3201166 + LSU-rRNA_Dme rRNA rRNA 1433 1788 -2112 1 781 1944 0 0 0 chrUextra 25803534 25803755 -3200901 + LSU-rRNA_Dme rRNA rRNA 1788 2008 -1892 1 781 601 28 0 0 chrUextra 25803855 25803927 -3200729 + R1_DM LINE R1 5285 5356 0 1 781 3629 70 48 0 chrUextra 25803960 25804476 -3200180 + R1_DM LINE R1 1 541 -4815 1 781 2463 185 6 24 chrUextra 25804576 25805197 -3199459 + SAR_DM Satellite Satellite 509 1118 -354 1 781 1837 5 0 0 chrUextra 25806019 25806230 -3198426 - TABOR_LTR LTR Gypsy -295 211 1 1 781 2395 18 7 7 chrUextra 25806228 25806639 -3198017 - TABOR_I LTR Gypsy 0 6336 5805 1 781 4169 45 96 0 chrUextra 25806739 25807342 -3197314 + TRANSIB2 DNA Transib 1309 1969 -875 1 781 2750 169 15 7 chrUextra 25807460 25808060 -3196596 - SAR_DM Satellite Satellite -542 930 326 1 781 1224 0 0 0 chrUextra 25808181 25808321 -3196335 - SSU-rRNA_Dme rRNA rRNA -1855 140 1 1 781 32 0 0 0 chrUextra 25808453 25808485 -3196171 + AT_rich Low_complexity Low_complexity 1 32 0 1 781 454 157 0 0 chrUextra 25809623 25809693 -3194963 + A-rich Low_complexity Low_complexity 108 177 0 1 781 234 0 0 162 chrUextra 25809693 25810235 -3194421 + (CAAGA)n Simple_repeat Simple_repeat 1 454 0 1 781 5125 19 0 0 chrUextra 25810344 25810965 -3193691 - R1_DM LINE R1 -860 4496 3876 1 781 5365 3 0 0 chrUextra 25811066 25811686 -3192970 - R1_DM LINE R1 -3296 2060 1441 1 781 1571 206 96 30 chrUextra 25811787 25812402 -3192254 - Gypsy12_LTR LTR Gypsy -488 1792 1154 1 781 2762 178 11 5 chrUextra 25812507 25813128 -3191528 + SAR_DM Satellite Satellite 267 891 -581 1 781 2594 180 10 7 chrUextra 25813228 25813826 -3190830 - SAR_DM Satellite Satellite -627 845 246 1 781 354 127 0 0 chrUextra 25813786 25813849 -3190807 + ARS406_DM Unknown Unknown 1 63 -290 1 781 5219 5 0 0 chrUextra 25813949 25814570 -3190086 + MDG1_I LTR Gypsy 5406 6026 -570 1 781 2770 173 15 7 chrUextra 25814675 25815291 -3189365 + SAR_DM Satellite Satellite 399 1019 -453 1 781 2302 94 10 26 chrUextra 25815391 25816008 -3188648 - DMSAT6 Satellite Satellite -70 606 1 1 781 2730 171 10 5 chrUextra 25816136 25816731 -3187925 + SAR_DM Satellite Satellite 326 923 -549 1 781 1191 30 118 6 chrUextra 25816833 25817002 -3187654 - R1_DM LINE R1 -1974 3382 3195 1 781 3680 24 0 2 chrUextra 25817000 25817452 -3187204 - R1_DM LINE R1 -2484 2872 2422 1 781 2180 207 20 9 chrUextra 25817560 25818170 -3186486 + SAR_DM Satellite Satellite 1 617 -396 1 781 2897 160 14 11 chrUextra 25818275 25818896 -3185760 + SAR_DM Satellite Satellite 408 1030 -442 1 781 4042 81 89 0 chrUextra 25818996 25819613 -3185043 + TART LINE telomeric 1030 1701 -12776 1 781 2485 100 29 5 chrUextra 25819717 25820330 -3184326 + DMSAT6 Satellite Satellite 1 628 -97 1 781 27 0 0 0 chrUextra 25820560 25820587 -3184069 + AT_rich Low_complexity Low_complexity 1 27 0 1 97 2667 158 23 16 chrUextra 25821159 25821770 -3182886 - SAR_DM Satellite Satellite -505 967 353 1 782 2496 207 24 24 chrUextra 25821890 25822501 -3182155 - SAR_DM Satellite Satellite -1100 611 1 1 782 2850 164 10 10 chrUextra 25822602 25823222 -3181434 - SAR_DM Satellite Satellite -521 951 332 1 782 3874 62 23 19 chrUextra 25823322 25823941 -3180715 - R1_DM LINE R1 -4659 697 1 1 782 4849 7 13 8 chrUextra 25824044 25824662 -3179994 - Invader3_I LTR Gypsy -71 4817 4197 1 782 5075 24 2 0 chrUextra 25824762 25825382 -3179274 + R1_DM LINE R1 4583 5203 -153 1 782 2670 191 7 5 chrUextra 25825486 25826101 -3178555 - SAR_DM Satellite Satellite -620 852 237 1 782 5036 8 0 3 chrUextra 25826202 25826822 -3177834 + STALKER4_I LTR Gypsy 1147 1764 -4766 1 782 2484 170 21 20 chrUextra 25827642 25828249 -3176407 - SAR_DM Satellite Satellite -539 933 326 1 782 1452 5 25 15 chrUextra 25828362 25828560 -3176096 + NTS_DM Other Other 41 240 0 1 782 1290 6 0 18 chrUextra 25828560 25828725 -3175931 + NTS_DM Other Other 1 162 -78 1 782 488 119 36 0 chrUextra 25828835 25828919 -3175737 + NTS_DM Other Other 4 90 -150 1 782 5254 18 2 0 chrUextra 25829082 25829702 -3174954 + Gypsy6_I LTR Gypsy 4756 5376 -1636 1 782 2545 73 15 15 chrUextra 25829813 25830422 -3174234 - DMSAT6 Satellite Satellite -4 609 1 1 782 682 173 31 10 chrUextra 25830522 25830734 -3173922 - DNAREP1_DM LINE Penelope -262 332 128 1 782 502 143 0 11 chrUextra 25830819 25830911 -3173745 - DNAREP1_DM LINE Penelope -503 91 1 1 782 679 114 65 138 chrUextra 25830953 25831142 -3173514 - DNAREP1_DM LINE Penelope -287 307 5 1 782 2661 181 15 7 chrUextra 25831242 25831854 -3172802 + SAR_DM Satellite Satellite 287 903 -569 1 782 2147 115 10 57 chrUextra 25831963 25832582 -3172074 + DMSAT6 Satellite Satellite 1 589 -67 1 782 4448 55 0 0 chrUextra 25832715 25833302 -3171354 + FW_DM LINE Jockey 111 697 -3995 1 782 5026 24 23 0 chrUextra 25833402 25834022 -3170634 - R1_DM LINE R1 -3280 2076 1443 1 782 2796 171 11 10 chrUextra 25834122 25834741 -3169915 - SAR_DM Satellite Satellite -428 1044 425 1 782 2488 37 339 49 chrUextra 25834842 25835376 -3169280 + MDG1_I LTR Gypsy 5908 6596 0 1 782 383 68 17 0 chrUextra 25835395 25835454 -3169202 + (TAA)n Simple_repeat Simple_repeat 3 62 0 1 782 4963 16 0 0 chrUextra 25835562 25836182 -3168474 + Invader2_I LTR Gypsy 2974 3593 -999 1 782 2781 165 15 7 chrUextra 25836291 25836896 -3167760 + SAR_DM Satellite Satellite 282 891 -581 1 782 2731 175 28 7 chrUextra 25837002 25837618 -3167038 + SAR_DM Satellite Satellite 409 1037 -435 1 782 1747 27 0 59 chrUextra 25838103 25838342 -3166314 - Baggins1 LINE LOA 0 5453 5229 1 782 5061 11 0 0 chrUextra 25838442 25839062 -3165594 - Invader2_I LTR Gypsy -1099 3493 2874 1 782 1833 47 0 8 chrUextra 25839544 25839780 -3164876 - PROTOP_B DNA P 0 1153 920 1 782 2209 163 13 8 chrUextra 25839882 25840500 -3164156 + SAR_DM Satellite Satellite 1 621 -425 1 782 2827 166 8 10 chrUextra 25840607 25841221 -3163435 + SAR_DM Satellite Satellite 425 1037 -435 1 782 2557 167 24 26 chrUextra 25841326 25841942 -3162714 - SAR_DM Satellite Satellite -620 852 238 1 782 3588 273 11 19 chrUextra 25842049 25843382 -3161274 + SAR_DM Satellite Satellite 1 1323 -208 1 782 1345 6 0 0 chrUextra 25843482 25843644 -3161012 - NTS_DM Other Other -78 162 1 1 782 1756 17 17 17 chrUextra 25843644 25843884 -3160772 - NTS_DM Other Other 0 240 1 1 782 1538 19 18 18 chrUextra 25843884 25844102 -3160554 - NTS_DM Other Other 0 240 23 1 782 2558 179 8 8 chrUextra 25844203 25844799 -3159857 - SAR_DM Satellite Satellite -682 790 195 1 782 640 121 0 8 chrUextra 25844705 25844822 -3159834 + ARS406_DM Unknown Unknown 1 116 -237 1 782 1388 6 0 0 chrUextra 25844922 25845089 -3159567 - NTS_DM Other Other -73 167 1 1 782 1710 25 17 17 chrUextra 25845089 25845329 -3159327 - NTS_DM Other Other 0 240 1 1 782 1522 14 19 19 chrUextra 25845329 25845542 -3159114 - NTS_DM Other Other 0 240 28 1 782 1356 196 29 7 chrUextra 25845642 25846257 -3158399 + SAR_DM Satellite Satellite 1 628 -668 1 782 1209 27 0 0 chrUextra 25846362 25846510 -3158146 + Gypsy4_I LTR Gypsy 6141 6288 0 1 782 2405 14 3 0 chrUextra 25846510 25846796 -3157860 + Gypsy4_LTR LTR Gypsy 1 287 0 1 782 306 73 0 0 chrUextra 25846799 25846840 -3157816 + (CATATA)n Simple_repeat Simple_repeat 2 42 0 1 782 1130 42 0 0 chrUextra 25846840 25846982 -3157674 + DM1731_LTR LTR Copia 118 259 -77 1 782 1047 82 0 0 chrUextra 25847089 25847247 -3157409 + ARS406_DM Unknown Unknown 1 158 -195 1 782 1982 191 9 4 chrUextra 25847244 25847701 -3156955 - SAR_DM Satellite Satellite -558 914 456 1 782 3910 2 4 2 chrUextra 25847802 25848255 -3156401 - SSU-rRNA_Dme rRNA rRNA -1541 454 1 1 782 32 0 0 0 chrUextra 25848387 25848419 -3156237 + AT_rich Low_complexity Low_complexity 1 32 0 1 782 813 30 0 0 chrUextra 25848522 25848622 -3156034 + (CAAGA)n Simple_repeat Simple_repeat 1 100 0 1 782 1389 39 0 0 chrUextra 25848622 25848801 -3155855 + (ACATG)n Simple_repeat Simple_repeat 1 180 0 1 782 1439 42 36 42 chrUextra 25848810 25849142 -3155514 + (CAAGA)n Simple_repeat Simple_repeat 1 329 0 1 782 2322 26 159 0 chrUextra 25849242 25849862 -3154794 + R1_DM LINE R1 2947 3665 -1691 1 782 5422 3 0 0 chrUextra 25849963 25850582 -3154074 - SSU-rRNA_Dme rRNA rRNA -1288 707 89 1 782 251 130 0 0 chrUextra 25850682 25850728 -3153928 - ARS406_DM Unknown Unknown -307 46 1 1 782 2878 169 5 8 chrUextra 25850688 25851302 -3153354 + SAR_DM Satellite Satellite 246 857 -615 1 782 5423 0 2 0 chrUextra 25851402 25852022 -3152634 - LSU-rRNA_Dme rRNA rRNA -460 3440 2820 1 782 2571 188 10 5 chrUextra 25852122 25852731 -3151925 - SAR_DM Satellite Satellite -637 835 224 1 782 430 113 0 0 chrUextra 25852669 25852740 -3151916 + ARS406_DM Unknown Unknown 1 71 -282 1 782 790 11 0 0 chrUextra 25853562 25853654 -3151002 - NTS_DM Other Other -148 92 1 1 782 1491 19 18 32 chrUextra 25853654 25853873 -3150783 - NTS_DM Other Other 0 240 25 1 782 334 44 0 0 chrUextra 25853925 25853970 -3150686 - NTS_DM Other Other -39 201 157 1 782 2855 163 11 8 chrUextra 25854282 25854899 -3149757 + SAR_DM Satellite Satellite 419 1037 -435 1 782 924 41 0 0 chrUextra 25855002 25855123 -3149533 + (TCTTG)n Simple_repeat Simple_repeat 4 124 0 1 782 2323 96 10 26 chrUextra 25855722 25856342 -3148314 + DMSAT6 Satellite Satellite 1 609 -399 1 782 1872 0 8 8 chrUextra 25856442 25856677 -3147979 + LSU-rRNA_Dme rRNA rRNA 1554 1788 -2112 1 782 3010 0 0 0 chrUextra 25856721 25857062 -3147594 + LSU-rRNA_Dme rRNA rRNA 1788 2128 -1772 1 782 3730 9 2 0 chrUextra 25857162 25857627 -3147029 + STALKER4_I LTR Gypsy 3155 3620 -2910 1 782 1270 18 6 6 chrUextra 25857614 25857782 -3146874 + STALKER4_I LTR Gypsy 4662 4829 -1701 1 782 2290 111 11 13 chrUextra 25857882 25858502 -3146154 - DMSAT6 Satellite Satellite -18 619 1 1 782 3199 92 73 32 chrUextra 25858603 25859222 -3145434 + STALKER4_I LTR Gypsy 643 1286 -5244 1 782 1701 21 17 21 chrUextra 25859346 25859587 -3145069 - NTS_DM Other Other 0 240 1 1 782 1756 17 17 17 chrUextra 25859587 25859827 -3144829 - NTS_DM Other Other 0 240 1 1 782 650 36 35 35 chrUextra 25859827 25859942 -3144714 - NTS_DM Other Other 0 240 126 1 782 5368 2 2 2 chrUextra 25860042 25860662 -3143994 + LSU-rRNA_Dme rRNA rRNA 3224 3843 -57 1 782 23 54 0 0 chrUextra 25860778 25860815 -3143841 + AT_rich Low_complexity Low_complexity 1 37 0 1 782 832 9 9 27 chrUextra 25860841 25860952 -3143704 + NTS_DM Other Other 25 133 -107 1 782 817 0 0 0 chrUextra 25860952 25861048 -3143608 + NTS_DM Other Other 38 133 -107 1 782 1408 20 20 20 chrUextra 25861048 25861251 -3143405 + NTS_DM Other Other 38 240 0 1 782 1016 16 0 15 chrUextra 25861251 25861382 -3143274 + NTS_DM Other Other 1 129 -111 1 782 2794 183 7 3 chrUextra 25861486 25862101 -3142555 + SAR_DM Satellite Satellite 246 862 -610 1 782 1305 51 0 0 chrUextra 25862217 25862395 -3142261 + (TCTTG)n Simple_repeat Simple_repeat 1 178 0 1 782 393 75 0 0 chrUextra 25862395 25862448 -3142208 + (ACTTG)n Simple_repeat Simple_repeat 3 55 0 1 782 1620 0 0 0 chrUextra 25862463 25862821 -3141835 + (CACAA)n Simple_repeat Simple_repeat 1 358 0 1 782 5078 24 0 2 chrUextra 25862922 25863542 -3141114 - R1_DM LINE R1 -3196 2160 1542 1 782 1562 20 5 5 chrUextra 25863642 25863846 -3140810 - NTS_DM Other Other -36 204 1 1 782 1408 20 20 20 chrUextra 25863846 25864049 -3140607 - NTS_DM Other Other 0 240 38 1 782 817 0 0 0 chrUextra 25864049 25864145 -3140511 - NTS_DM Other Other -107 133 38 1 782 809 19 9 27 chrUextra 25864145 25864256 -3140400 - NTS_DM Other Other -107 133 25 1 782 2288 206 10 13 chrUextra 25864368 25864982 -3139674 - SAR_DM Satellite Satellite -416 1056 445 1 782 2927 138 6 4 chrUextra 25865082 25865702 -3138954 + BATUMI_I LTR Pao 3956 4652 -3262 1 782 3460 90 40 24 chrUextra 25865802 25866346 -3138310 + Gypsy12_I LTR Gypsy 1002 1554 -3992 1 782 516 43 14 0 chrUextra 25866353 25866422 -3138234 + Gypsy12_I LTR Gypsy 1503 1572 -3974 1 782 5390 0 2 2 chrUextra 25866522 25867142 -3137514 + LSU-rRNA_Dme rRNA rRNA 2839 3458 -442 1 782 878 18 106 0 chrUextra 25867242 25867355 -3137301 - PROTOP_A DNA P -980 125 1 1 782 2244 11 0 0 chrUextra 25867355 25867617 -3137039 + PROTOP_A DNA P 844 1105 0 1 782 2020 4 8 4 chrUextra 25867617 25867862 -3136794 - TART LINE telomeric -3953 10524 10279 1 782 2279 106 15 13 chrUextra 25867962 25868582 -3136074 + DMSAT6 Satellite Satellite 1 621 -264 1 782 4982 15 0 5 chrUextra 25868682 25869302 -3135354 - CIRCE LINE Composite -1558 4798 4182 1 782 2793 20 73 0 chrUextra 25869665 25870022 -3134634 + PROTOP_A DNA P 1 383 -722 1 782 4843 15 2 19 chrUextra 25870122 25870742 -3133914 - STALKER4_I LTR Gypsy -1212 5318 4710 1 782 680 0 115 0 chrUextra 25870846 25871054 -3133602 + (TTA)n Simple_repeat Simple_repeat 1 232 0 1 782 3557 0 0 0 chrUextra 25871058 25871462 -3133194 - ROO_LTR LTR Pao 0 428 25 1 782 1620 4 0 0 chrUextra 25871915 25872182 -3132474 + (TTCTC)n Simple_repeat Simple_repeat 1 267 0 1 782 587 21 40 40 chrUextra 25872282 25872381 -3132275 + NTS_DM Other Other 142 240 0 1 782 1726 17 17 21 chrUextra 25872381 25872622 -3132034 + NTS_DM Other Other 1 240 0 1 782 1756 17 17 17 chrUextra 25872622 25872862 -3131794 + NTS_DM Other Other 1 240 0 1 782 332 25 0 0 chrUextra 25872862 25872902 -3131754 + NTS_DM Other Other 1 40 -200 1 782 5144 8 3 3 chrUextra 25873002 25873622 -3131034 - R1_DM LINE R1 -1278 4078 3459 1 782 2641 188 10 8 chrUextra 25873725 25874342 -3130314 + SAR_DM Satellite Satellite 244 861 -611 1 782 2299 97 23 14 chrUextra 25874443 25875062 -3129594 + DMSAT6 Satellite Satellite 1 624 0 1 782 1167 7 0 0 chrUextra 25875330 25875465 -3129191 - 5S_DM RNA RNA 0 135 1 1 782 650 13 0 0 chrUextra 25875703 25875782 -3128874 - 5S_DM RNA RNA 0 135 57 1 782 1040 167 33 8 chrUextra 25875882 25876124 -3128532 + SAR_DM Satellite Satellite 656 903 -569 1 782 657 53 53 0 chrUextra 25876039 25876134 -3128522 - ARS406_DM Unknown Unknown -164 189 90 1 782 1725 167 6 8 chrUextra 25876139 25876502 -3128154 + SAR_DM Satellite Satellite 496 857 -615 1 782 2285 92 18 26 chrUextra 25876616 25877222 -3127434 + DMSAT6 Satellite Satellite 1 600 -3 1 782 949 179 35 17 chrUextra 25877323 25877707 -3126949 + SAR_DM Satellite Satellite 1 391 -680 1 782 907 171 36 9 chrUextra 25877718 25877942 -3126714 + SAR_DM Satellite Satellite 539 768 -704 1 782 2544 229 3 3 chrUextra 25878762 25879372 -3125284 + ROVER-I_DM LTR Gypsy 1992 2601 -3983 1 782 2790 164 13 11 chrUextra 25879488 25880100 -3124556 + SAR_DM Satellite Satellite 425 1037 -435 1 782 920 69 3 17 chrUextra 25880202 25880822 -3123834 + RSP Satellite Satellite 1 611 0 1 782 2992 22 0 29 chrUextra 25880922 25881301 -3123355 + CIRCE LINE Composite 1515 1882 -4474 1 782 404 332 18 18 chrUextra 25881310 25881537 -3123119 + Gypsy12_I LTR Gypsy 3835 4061 -1485 1 782 1218 38 0 36 chrUextra 25881377 25881542 -3123114 + CIRCE LINE Composite 1888 2046 -4310 1 782 2018 13 0 0 chrUextra 25881642 25881877 -3122779 + PROTOP_A DNA P 871 1105 0 1 782 241 176 0 19 chrUextra 25881915 25881967 -3122689 - HMSBEAGLE_I LTR Gypsy -6308 221 171 1 782 351 49 65 16 chrUextra 25881981 25882043 -3122613 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 782 922 168 102 15 chrUextra 25882042 25882247 -3122409 - DMLTR5 LTR Gypsy 0 266 44 1 782 5345 2 2 2 chrUextra 25883082 25883702 -3120954 - LSU-rRNA_Dme rRNA rRNA -1173 2727 2108 1 782 5050 16 2 3 chrUextra 25883802 25884422 -3120234 - R1_DM LINE R1 -1336 4020 3402 1 782 2312 191 42 7 chrUextra 25884522 25885138 -3119518 - SAR_DM Satellite Satellite -611 861 224 1 782 3396 167 28 0 chrUextra 25885242 25885860 -3118796 + Gypsy5_I LTR Gypsy 2510 3144 -3365 1 782 4997 14 0 2 chrUextra 25885962 25886582 -3118074 - QUASIMODO_I LTR Gypsy -4537 1523 905 1 782 4856 15 18 24 chrUextra 25886682 25887302 -3117354 + ACCORD2_I LTR Gypsy 2 617 -6595 1 782 2239 112 16 41 chrUextra 25887407 25888017 -3116639 + DMSAT6 Satellite Satellite 1 594 0 1 782 5481 2 3 3 chrUextra 25888126 25888742 -3115914 - LSU-rRNA_Dme rRNA rRNA -2324 1576 961 1 782 1368 66 3 0 chrUextra 25888846 25889447 -3115209 + (ATAAG)n Simple_repeat Simple_repeat 1 603 0 1 782 3160 163 7 8 chrUextra 25889562 25890182 -3114474 - SAR_DM Satellite Satellite -441 1031 413 1 782 2751 181 21 10 chrUextra 25890282 25890902 -3113754 + SAR_DM Satellite Satellite 274 900 -572 1 782 3632 277 17 24 chrUextra 25891004 25892342 -3112314 - SAR_DM Satellite Satellite -425 1329 1 1 782 2958 174 8 8 chrUextra 25892448 25893061 -3111595 - SAR_DM Satellite Satellite -514 958 346 1 782 5038 8 40 2 chrUextra 25893162 25893782 -3110874 + QUASIMODO_I LTR Gypsy 3842 4485 -1575 1 782 5271 31 0 0 chrUextra 25893882 25894502 -3110154 + R1_DM LINE R1 1376 1995 -3361 1 782 5281 8 50 0 chrUextra 25894602 25895221 -3109435 - DOC2_DM LINE Jockey -1456 3337 2688 1 782 2824 173 16 21 chrUextra 25895321 25895940 -3108716 - SAR_DM Satellite Satellite -445 1027 412 1 782 4591 47 31 5 chrUextra 25896040 25896659 -3107997 + IDEFIX_I LTR Gypsy 3182 3816 -1812 1 782 262 146 0 0 chrUextra 25896761 25896809 -3107847 - ARS406_DM Unknown Unknown -305 48 1 1 782 2895 179 8 5 chrUextra 25896769 25897374 -3107282 + SAR_DM Satellite Satellite 246 852 -620 1 782 3036 162 10 11 chrUextra 25897479 25898097 -3106559 - SAR_DM Satellite Satellite -435 1037 421 1 782 5184 19 23 7 chrUextra 25898197 25898816 -3105840 + FW_DM LINE Jockey 3906 4534 -158 1 782 2401 173 31 58 chrUextra 25898963 25899535 -3105121 + TART_B1 LINE telomeric 798 1354 -9300 1 782 5560 0 2 0 chrUextra 25899635 25900254 -3104402 + DOC LINE Jockey 2418 3037 -1688 1 782 2249 234 8 5 chrUextra 25900356 25900969 -3103687 - Stalker2_I LTR Gypsy -3256 4146 3532 1 782 5668 0 2 0 chrUextra 25901073 25901692 -3102964 + SSU-rRNA_Dme rRNA rRNA 275 894 -1101 1 782 5590 2 2 0 chrUextra 25901792 25902410 -3102246 - LSU-rRNA_Dme rRNA rRNA -1494 2406 1788 1 782 2778 185 8 10 chrUextra 25902511 25903129 -3101527 - SAR_DM Satellite Satellite -399 1073 457 1 782 4605 26 6 0 chrUextra 25903949 25904493 -3100163 - R1_DM LINE R1 -251 5105 4559 1 782 616 26 0 0 chrUextra 25904491 25904568 -3100088 - R1_DM LINE R1 -1270 4086 4010 1 782 3009 168 8 10 chrUextra 25904668 25905287 -3099369 - SAR_DM Satellite Satellite -443 1029 412 1 782 2892 171 14 10 chrUextra 25905387 25906006 -3098650 + SAR_DM Satellite Satellite 333 954 -518 1 782 2316 187 4 6 chrUextra 25906106 25906600 -3098056 + SAR_DM Satellite Satellite 584 1076 -396 1 782 379 211 9 37 chrUextra 25906617 25906725 -3097931 + SAR_DM Satellite Satellite 667 771 -701 1 782 2893 174 10 10 chrUextra 25906825 25907436 -3097220 - SAR_DM Satellite Satellite -615 857 247 1 782 285 106 0 0 chrUextra 25907397 25907444 -3097212 + ARS406_DM Unknown Unknown 1 47 -306 1 782 2652 194 10 8 chrUextra 25907545 25908159 -3096497 + SAR_DM Satellite Satellite 287 901 -571 1 782 1777 201 18 93 chrUextra 25908276 25908880 -3095776 - HETA LINE telomeric -2135 3946 3388 1 782 1599 5 0 0 chrUextra 25908982 25909204 -3095452 + (GAGAA)n Simple_repeat Simple_repeat 1 222 0 1 782 450 0 0 51 chrUextra 25909701 25909760 -3094896 - NTS_DM Other Other -184 56 1 1 782 1915 8 17 13 chrUextra 25909760 25909999 -3094657 - NTS_DM Other Other 0 240 1 1 782 1561 10 20 15 chrUextra 25909999 25910201 -3094455 - NTS_DM Other Other 0 240 38 1 782 907 9 0 27 chrUextra 25910201 25910313 -3094343 - NTS_DM Other Other -107 133 25 1 782 2586 86 15 14 chrUextra 25910420 25911011 -3093645 - DMSAT6 Satellite Satellite -82 592 1 1 782 2941 174 8 5 chrUextra 25911139 25911741 -3092915 + SAR_DM Satellite Satellite 334 937 -535 1 782 1004 71 0 0 chrUextra 25911618 25911758 -3092898 - ARS406_DM Unknown Unknown -164 189 50 1 782 977 185 62 45 chrUextra 25913624 25913913 -3090743 + STALKER4_I LTR Gypsy 885 1178 -5352 1 782 2442 190 30 10 chrUextra 25914031 25914632 -3090024 - SAR_DM Satellite Satellite -396 1076 464 1 782 2592 78 21 42 chrUextra 25914734 25915353 -3089303 - DMSAT6 Satellite Satellite -50 606 1 1 782 434 0 19 0 chrUextra 25915453 25915506 -3089150 + 5S_DM RNA RNA 82 135 0 1 782 1222 7 0 0 chrUextra 25915737 25915872 -3088784 + 5S_DM RNA RNA 1 135 0 1 782 2551 91 5 65 chrUextra 25916172 25916790 -3087866 - DMSAT6 Satellite Satellite -103 580 1 1 782 1917 281 11 7 chrUextra 25916891 25917462 -3087194 + HMSBEAGLE_I LTR Gypsy 3419 3933 -2596 1 782 2332 111 15 42 chrUextra 25917614 25918229 -3086427 - DMSAT6 Satellite Satellite 0 597 1 1 782 5636 0 2 0 chrUextra 25918329 25918948 -3085708 + SSU-rRNA_Dme rRNA rRNA 546 1165 -830 1 782 3785 10 2 2 chrUextra 25919048 25919520 -3085136 - Copia2_I LTR Copia -3640 522 1 1 782 1305 0 7 0 chrUextra 25919520 25919667 -3084989 - Copia2_LTR_DM LTR Copia 0 198 51 1 782 5419 8 2 3 chrUextra 25919767 25920386 -3084270 + DOC2_DM LINE Jockey 1724 2341 -2452 1 782 21 0 0 0 chrUextra 25920770 25920791 -3083865 + AT_rich Low_complexity Low_complexity 1 21 0 1 782 2648 187 10 12 chrUextra 25921205 25921811 -3082845 - SAR_DM Satellite Satellite -673 799 195 1 782 606 132 0 9 chrUextra 25921717 25921824 -3082832 + ARS406_DM Unknown Unknown 1 106 -247 1 782 5355 26 0 0 chrUextra 25921924 25922543 -3082113 + R1_DM LINE R1 1619 2237 -3119 1 782 3081 169 8 8 chrUextra 25923362 25923981 -3080675 - SAR_DM Satellite Satellite -435 1037 419 1 782 1556 0 6 0 chrUextra 25924081 25924256 -3080400 - R1_DM LINE R1 -5180 176 1 1 782 476 36 0 0 chrUextra 25924256 25924311 -3080345 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2578 1 782 3597 0 0 0 chrUextra 25924307 25924700 -3079956 - R2_DM LINE R2 -6 3601 3209 1 782 2985 150 10 21 chrUextra 25924807 25925419 -3079237 + SAR_DM Satellite Satellite 332 936 -536 1 782 5374 18 0 2 chrUextra 25925519 25926138 -3078518 - FW_DM LINE Jockey -3474 1218 601 1 782 5592 5 0 2 chrUextra 25926238 25926857 -3077799 + LSU-rRNA_Dme rRNA rRNA 2815 3432 -468 1 782 2557 95 10 26 chrUextra 25926957 25927576 -3077080 - DMSAT6 Satellite Satellite -127 608 1 1 782 1333 18 0 12 chrUextra 25927676 25927844 -3076812 + IDEFIX_LTR LTR Gypsy 151 316 -278 1 782 21 0 0 0 chrUextra 25927844 25927865 -3076791 + AT_rich Low_complexity Low_complexity 1 21 0 1 782 2773 35 6 9 chrUextra 25927867 25928217 -3076439 - CIRCE LINE Composite -1027 5329 4981 1 782 2977 173 8 7 chrUextra 25928396 25929014 -3075642 - SAR_DM Satellite Satellite -478 994 376 1 782 5500 10 0 2 chrUextra 25929115 25929733 -3074923 - Gypsy4_I LTR Gypsy -3263 3025 2409 1 782 34 24 0 0 chrUextra 25930300 25930341 -3074315 + AT_rich Low_complexity Low_complexity 1 41 0 1 782 2697 35 47 0 chrUextra 25931271 25931609 -3073047 + TRANSIB2 DNA Transib 1496 1849 -995 1 782 1693 88 0 4 chrUextra 25931634 25931873 -3072783 + MICROPIA_I LTR Gypsy 3882 4119 -357 1 782 2865 178 11 8 chrUextra 25931990 25932608 -3072048 + SAR_DM Satellite Satellite 284 903 -569 1 782 5380 2 0 2 chrUextra 25932709 25933328 -3071328 - ROO_I LTR Pao -4241 4015 3398 1 782 5538 2 0 0 chrUextra 25933428 25934047 -3070609 - LSU-rRNA_Dme rRNA rRNA -2733 1167 549 1 782 5585 0 0 3 chrUextra 25934147 25934766 -3069890 + SSU-rRNA_Dme rRNA rRNA 548 1164 -831 1 782 476 204 17 17 chrUextra 25934866 25934981 -3069675 + HETRP_DM Satellite Satellite 1561 1675 -197 1 782 709 181 18 49 chrUextra 25935121 25935284 -3069372 + HETRP_DM Satellite Satellite 1518 1675 -197 1 782 279 139 0 0 chrUextra 25935442 25935485 -3069171 + HETRP_DM Satellite Satellite 1529 1571 -301 1 782 3029 174 7 7 chrUextra 25935585 25936204 -3068452 - SAR_DM Satellite Satellite -435 1037 419 1 782 2933 174 10 7 chrUextra 25936309 25936923 -3067733 + SAR_DM Satellite Satellite 246 861 -611 1 782 5326 14 0 0 chrUextra 25937023 25937642 -3067014 + STALKER4_I LTR Gypsy 1436 2054 -4476 1 782 5649 3 0 0 chrUextra 25937742 25938361 -3066295 + Invader6_I LTR Gypsy 327 945 -3154 1 782 5399 11 0 3 chrUextra 25938461 25939080 -3065576 - FW_DM LINE Jockey -2392 2300 1684 1 782 514 119 36 0 chrUextra 25939229 25939313 -3065343 - NTS_DM Other Other -150 90 4 1 782 1288 6 6 24 chrUextra 25939423 25939588 -3065068 - NTS_DM Other Other -78 162 1 1 782 1647 0 24 14 chrUextra 25939588 25939799 -3064857 - NTS_DM Other Other 0 240 28 1 782 1665 30 8 25 chrUextra 25939899 25940137 -3064519 + ROO_I LTR Pao 396 629 -7627 1 782 327 136 0 0 chrUextra 25940143 25940202 -3064454 + (CAG)n Simple_repeat Simple_repeat 1 59 0 1 782 495 45 0 0 chrUextra 25940202 25940269 -3064387 + ROO_I LTR Pao 730 796 -7460 1 782 1329 6 22 17 chrUextra 25940618 25940798 -3063858 + NTS_DM Other Other 60 240 0 1 782 1355 6 0 18 chrUextra 25940798 25940963 -3063693 + NTS_DM Other Other 1 162 -78 1 782 514 119 36 0 chrUextra 25941073 25941157 -3063499 + NTS_DM Other Other 4 90 -150 1 782 2615 181 10 26 chrUextra 25941337 25941956 -3062700 - SAR_DM Satellite Satellite -355 1117 509 1 782 730 124 0 0 chrUextra 25942056 25942177 -3062479 - ARS406_DM Unknown Unknown -232 121 1 1 782 2711 174 12 10 chrUextra 25942084 25942675 -3061981 + SAR_DM Satellite Satellite 195 786 -686 1 782 5628 0 0 2 chrUextra 25942775 25943394 -3061262 - LSU-rRNA_Dme rRNA rRNA -566 3334 2717 1 782 1940 99 0 39 chrUextra 25943494 25943799 -3060857 + Gypsy12_I LTR Gypsy 684 976 -4570 1 782 279 276 0 0 chrUextra 25943806 25943893 -3060763 + TOM_I LTR Gypsy 3276 3362 -2750 1 782 1075 159 10 29 chrUextra 25943906 25944113 -3060543 + Gypsy12_LTR LTR Gypsy 1 203 -2133 1 782 1861 108 362 6 chrUextra 25944213 25944697 -3059959 + FB4_DM DNA Tc1 414 1069 -3020 1 782 447 93 23 34 chrUextra 25944722 25944832 -3059824 - FB4_DM DNA Tc1 -3071 1018 932 1 782 2984 164 10 11 chrUextra 25944932 25945549 -3059107 - SAR_DM Satellite Satellite -620 852 237 1 782 731 119 0 0 chrUextra 25945651 25945769 -3058887 - ARS406_DM Unknown Unknown -235 118 1 1 782 2634 182 12 8 chrUextra 25945676 25946268 -3058388 + SAR_DM Satellite Satellite 195 788 -684 1 782 2522 83 23 16 chrUextra 25946370 25946983 -3057673 + DMSAT6 Satellite Satellite 1 616 -48 1 782 2792 181 8 8 chrUextra 25947094 25947705 -3056951 - SAR_DM Satellite Satellite -569 903 293 1 782 3566 242 52 28 chrUextra 25947809 25949060 -3055596 + SAR_DM Satellite Satellite 1 1282 -202 1 782 621 38 0 0 chrUextra 25949066 25949146 -3055510 - ARS406_DM Unknown Unknown -195 158 79 1 782 3760 15 3 103 chrUextra 25949246 25949858 -3054798 - DM176_I LTR Gypsy -5768 652 102 1 782 2982 181 10 5 chrUextra 25949968 25950584 -3054072 + SAR_DM Satellite Satellite 252 870 -602 1 782 1795 188 7 10 chrUextra 25950696 25951074 -3053582 + SAR_DM Satellite Satellite 1 507 -655 1 782 1115 76 0 0 chrUextra 25951074 25951232 -3053424 - ARS406_DM Unknown Unknown -195 158 1 1 782 1795 188 7 10 chrUextra 25951232 25951303 -3053353 + SAR_DM Satellite Satellite 508 604 -558 1 782 5523 0 0 2 chrUextra 25951403 25952022 -3052634 + R1_DM LINE R1 2610 3227 -2129 1 783 5117 13 11 2 chrUextra 25952840 25953458 -3051198 - ROO_I LTR Pao -4873 3383 2760 1 783 4919 34 45 10 chrUextra 25953558 25954174 -3050482 - FW_DM LINE Jockey -1965 2727 2090 1 783 3859 2 0 0 chrUextra 25954276 25954729 -3049927 + STALKER4_I LTR Gypsy 3222 3674 -2856 1 783 1378 19 0 18 chrUextra 25954729 25954894 -3049762 - BATUMI_I LTR Pao -679 7284 7123 1 783 5450 3 5 3 chrUextra 25954994 25955612 -3049044 + LSU-rRNA_Dme rRNA rRNA 1102 1720 -2180 1 783 5543 2 0 2 chrUextra 25955712 25956330 -3048326 + R1_DM LINE R1 1130 1746 -3610 1 783 1304 18 0 6 chrUextra 25956493 25956658 -3047998 - NTS_DM Other Other -39 201 38 1 783 907 9 0 27 chrUextra 25956658 25956770 -3047886 - NTS_DM Other Other -107 133 25 1 783 1304 18 0 6 chrUextra 25956822 25956987 -3047669 - NTS_DM Other Other -39 201 38 1 783 484 16 0 0 chrUextra 25956987 25957048 -3047608 - NTS_DM Other Other -107 133 73 1 783 299 130 19 0 chrUextra 25957148 25957202 -3047454 - ARS406_DM Unknown Unknown -298 55 1 1 783 3057 174 5 3 chrUextra 25957162 25957766 -3046890 + SAR_DM Satellite Satellite 246 850 -622 1 783 2435 107 27 42 chrUextra 25957886 25958483 -3046173 - DMSAT6 Satellite Satellite -3 587 1 1 783 5038 2 2 42 chrUextra 25958584 25959202 -3045454 - LSU-rRNA_Dme rRNA rRNA -3296 604 12 1 783 2772 171 15 15 chrUextra 25959308 25959914 -3044742 + SAR_DM Satellite Satellite 332 937 -535 1 783 4878 10 2 5 chrUextra 25960020 25960636 -3044020 + FB4_DM DNA Tc1 2858 3471 -618 1 783 2820 176 10 16 chrUextra 25960738 25961356 -3043300 + SAR_DM Satellite Satellite 379 992 -480 1 783 5519 10 0 0 chrUextra 25961456 25962071 -3042585 + MDG3_I LTR Gypsy 931 1545 -3441 1 783 1512 0 16 0 chrUextra 25962177 25962360 -3042296 + Invader4_I LTR Gypsy 2228 2413 0 1 783 3141 6 0 0 chrUextra 25962360 25962706 -3041950 + Invader4_LTR LTR Gypsy 1 346 0 1 783 39 0 0 0 chrUextra 25963258 25963297 -3041359 + AT_rich Low_complexity Low_complexity 1 39 0 1 783 514 119 36 0 chrUextra 25963685 25963769 -3040887 - NTS_DM Other Other -150 90 4 1 783 1307 12 0 24 chrUextra 25963879 25964045 -3040611 - NTS_DM Other Other -78 162 1 1 783 1358 6 22 16 chrUextra 25964045 25964228 -3040428 - NTS_DM Other Other 0 240 57 1 783 5395 3 3 5 chrUextra 25964331 25964946 -3039710 + LSU-rRNA_Dme rRNA rRNA 817 1430 -2470 1 783 2763 183 10 7 chrUextra 25965054 25965664 -3038992 + SAR_DM Satellite Satellite 195 806 -666 1 783 2963 169 11 13 chrUextra 25965764 25966376 -3038280 + SAR_DM Satellite Satellite 428 1038 -434 1 783 1970 97 190 17 chrUextra 25966501 25966908 -3037748 + PROTOP_B DNA P 1 478 -675 1 783 1534 88 0 0 chrUextra 25966885 25967100 -3037556 + HOBO DNA hAT 330 544 -2472 1 783 2746 179 11 13 chrUextra 25967200 25967810 -3036846 + SAR_DM Satellite Satellite 295 903 -569 1 783 5330 19 0 0 chrUextra 25967919 25968536 -3036120 - R1_DM LINE R1 -866 4490 3874 1 783 2401 97 21 24 chrUextra 25968640 25969253 -3035403 - DMSAT6 Satellite Satellite -3 611 1 1 783 5317 19 0 7 chrUextra 25969354 25969972 -3034684 - Gypsy12_I LTR Gypsy -3140 2406 1793 1 783 5310 23 0 3 chrUextra 25970072 25970690 -3033966 - R1_DM LINE R1 -2933 2423 1808 1 783 2900 174 11 15 chrUextra 25971510 25972122 -3032534 - SAR_DM Satellite Satellite -464 1008 399 1 783 5577 3 2 0 chrUextra 25972226 25972844 -3031812 + LSU-rRNA_Dme rRNA rRNA 1814 2432 -1468 1 783 5584 5 0 0 chrUextra 25972944 25973562 -3031094 - LSU-rRNA_Dme rRNA rRNA -1351 2549 1932 1 783 2774 177 31 11 chrUextra 25973662 25974280 -3030376 + SAR_DM Satellite Satellite 439 1068 -404 1 783 383 56 0 0 chrUextra 25974380 25974434 -3030222 + ARS406_DM Unknown Unknown 105 158 -195 1 783 2781 170 18 5 chrUextra 25974431 25974998 -3029658 - SAR_DM Satellite Satellite -558 914 341 1 783 3019 175 8 5 chrUextra 25975098 25975714 -3028942 + SAR_DM Satellite Satellite 268 885 -587 1 783 303 330 182 0 chrUextra 25976250 25976426 -3028230 + Invader6_I LTR Gypsy 1982 2189 -1910 1 783 5456 13 0 0 chrUextra 25976534 25977152 -3027504 + STALKER4_I LTR Gypsy 3647 4264 -2266 1 783 3079 167 8 5 chrUextra 25977252 25977859 -3026797 - SAR_DM Satellite Satellite -539 933 325 1 783 353 102 17 0 chrUextra 25978688 25978747 -3025909 - ARS406_DM Unknown Unknown -293 60 1 1 783 3718 270 30 22 chrUextra 25978707 25980024 -3024632 + SAR_DM Satellite Satellite 1 1327 -242 1 783 4935 4 0 0 chrUextra 25980124 25980668 -3023988 + LSU-rRNA_Dme rRNA rRNA 2113 2656 -1244 1 783 736 0 0 0 chrUextra 25980662 25980742 -3023914 + R1_DM LINE R1 4831 4910 -446 1 783 3276 16 2 29 chrUextra 25980846 25981301 -3023355 - PROTOP DNA P -3650 830 388 1 783 1347 38 0 0 chrUextra 25981300 25981460 -3023196 - PROTOP DNA P -4200 280 121 1 783 2741 240 28 12 chrUextra 25981561 25982888 -3021768 - SAR_DM Satellite Satellite -645 1348 1 1 783 225 191 0 0 chrUextra 25982849 25982896 -3021760 + ARS406_DM Unknown Unknown 1 47 -306 1 783 2507 108 140 5 chrUextra 25982996 25983614 -3021042 + BATUMI_I LTR Pao 4157 4934 -3029 1 783 1681 45 22 0 chrUextra 25983715 25983938 -3020718 + QUASIMODO_I LTR Gypsy 4947 5174 -886 1 783 1685 62 16 0 chrUextra 25983928 25984185 -3020471 + QUASIMODO_I LTR Gypsy 5467 5727 -333 1 783 5248 18 3 3 chrUextra 25984432 25985050 -3019606 - R1_DM LINE R1 -1463 3893 3276 1 783 893 19 0 0 chrUextra 25985150 25985257 -3019399 - NTS_DM Other Other -96 144 38 1 783 907 9 0 27 chrUextra 25985257 25985369 -3019287 - NTS_DM Other Other -107 133 25 1 783 1304 18 0 6 chrUextra 25985421 25985586 -3019070 - NTS_DM Other Other -39 201 38 1 783 907 9 0 27 chrUextra 25985586 25985698 -3018958 - NTS_DM Other Other -107 133 25 1 783 22 56 0 0 chrUextra 25985724 25985760 -3018896 + AT_rich Low_complexity Low_complexity 1 36 0 1 783 25 0 0 0 chrUextra 25986346 25986371 -3018285 + AT_rich Low_complexity Low_complexity 1 25 0 1 783 2935 176 15 8 chrUextra 25986586 25987204 -3017452 - SAR_DM Satellite Satellite -425 1047 426 1 783 5624 0 0 2 chrUextra 25987304 25987922 -3016734 - LSU-rRNA_Dme rRNA rRNA -690 3210 2594 1 783 4426 42 0 0 chrUextra 25988114 25988640 -3016016 - BATUMI_I LTR Pao -3642 4321 3796 1 783 2780 172 57 10 chrUextra 25988741 25989358 -3015298 - SAR_DM Satellite Satellite -478 994 349 1 783 351 113 0 0 chrUextra 25989460 25989513 -3015143 + (TCTG)n Simple_repeat Simple_repeat 2 54 0 1 783 4569 24 0 2 chrUextra 25990176 25990715 -3013941 + DOC2_DM LINE Jockey 4256 4793 0 1 783 3643 81 172 5 chrUextra 25990942 25991501 -3013155 - Gypsy12_I LTR Gypsy 0 5546 4895 1 783 5083 18 3 5 chrUextra 25991612 25992230 -3012426 + Invader3_I LTR Gypsy 4097 4713 -175 1 783 1047 0 0 8 chrUextra 25992330 25992448 -3012208 + LSU-rRNA_Dme rRNA rRNA 3784 3900 0 1 783 22 56 0 0 chrUextra 25992520 25992556 -3012100 + AT_rich Low_complexity Low_complexity 1 36 0 1 783 262 150 0 0 chrUextra 25992561 25992601 -3012055 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 783 262 150 0 0 chrUextra 25992653 25992693 -3011963 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 783 262 150 0 0 chrUextra 25992745 25992785 -3011871 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 783 269 125 0 0 chrUextra 25992828 25992868 -3011788 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 783 22 56 0 0 chrUextra 25992881 25992917 -3011739 + AT_rich Low_complexity Low_complexity 1 36 0 1 783 892 88 0 0 chrUextra 25993051 25993188 -3011468 + ARS406_DM Unknown Unknown 22 158 -195 1 783 2348 176 8 8 chrUextra 25993185 25993666 -3010990 - SAR_DM Satellite Satellite -558 914 434 1 783 5055 31 2 8 chrUextra 25993766 25994384 -3010272 + BATUMI_I LTR Pao 2797 3410 -4553 1 783 5241 28 0 0 chrUextra 25994484 25995102 -3009554 + NINJA_I LTR Pao 2009 2626 -3385 1 783 5198 36 0 2 chrUextra 25995203 25995817 -3008839 + R1_DM LINE R1 1307 1919 -3437 1 783 2315 91 5 37 chrUextra 25995920 25996537 -3008119 - DMSAT6 Satellite Satellite -163 596 1 1 783 2590 188 17 10 chrUextra 25996637 25997233 -3007423 + SAR_DM Satellite Satellite 477 1076 -396 1 783 1161 0 0 0 chrUextra 25997483 25997612 -3007044 + (TAGA)n Simple_repeat Simple_repeat 2 130 0 1 783 1554 65 0 0 chrUextra 25997626 25997969 -3006687 + (TAGA)n Simple_repeat Simple_repeat 1 343 0 1 783 2485 97 9 66 chrUextra 25998076 25998652 -3006004 - DMSAT6 Satellite Satellite -37 542 1 1 783 4708 56 2 13 chrUextra 25998788 25999405 -3005251 - R1_DM LINE R1 -4592 764 155 1 783 2371 171 6 8 chrUextra 25999506 25999984 -3004672 - SAR_DM Satellite Satellite -416 1056 580 1 783 803 78 0 0 chrUextra 26000000 26000115 -3004541 + ARS406_DM Unknown Unknown 75 189 -164 1 783 5167 11 2 0 chrUextra 26000225 26000839 -3003817 - FW_DM LINE Jockey -3420 1272 658 1 783 2687 179 10 8 chrUextra 26001656 26002270 -3002386 + SAR_DM Satellite Satellite 380 994 -478 1 783 5015 10 2 2 chrUextra 26002373 26002990 -3001666 - QUASIMODO_I LTR Gypsy -868 5192 4576 1 783 4900 26 2 3 chrUextra 26003090 26003707 -3000949 + R1_DM LINE R1 2395 3010 -2346 1 783 1174 24 0 18 chrUextra 26003871 26004038 -3000618 - NTS_DM Other Other -39 201 38 1 783 850 18 0 27 chrUextra 26004038 26004150 -3000506 - NTS_DM Other Other -107 133 25 1 783 22 56 0 0 chrUextra 26004176 26004212 -3000444 + AT_rich Low_complexity Low_complexity 1 36 0 1 783 243 125 0 0 chrUextra 26004225 26004265 -3000391 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 783 4430 31 28 7 chrUextra 26004524 26005141 -2999515 - PROTOP DNA P -3335 1145 516 1 783 3044 103 70 34 chrUextra 26005244 26005858 -2998798 + STALKER4_I LTR Gypsy 629 1264 -5266 1 783 2927 53 0 10 chrUextra 26005958 26006360 -2998296 + PROTOP_A DNA P 708 1105 0 1 783 759 126 154 0 chrUextra 26006360 26006503 -2998153 - DNAREP1_DM LINE Penelope -20 574 410 1 783 479 100 0 0 chrUextra 26006497 26006567 -2998089 - DNAREP1_DM LINE Penelope -490 104 35 1 783 975 74 20 0 chrUextra 26006675 26006823 -2997833 + ARS406_DM Unknown Unknown 39 189 -164 1 783 2731 162 17 8 chrUextra 26006700 26007292 -2997364 - SAR_DM Satellite Satellite -535 937 341 1 783 2507 175 53 10 chrUextra 26008109 26008716 -2995940 - SAR_DM Satellite Satellite -471 1001 369 1 783 4596 23 68 5 chrUextra 26008826 26009443 -2995213 + DMRT1B LINE R1 1078 1733 -3450 1 783 4512 18 8 2 chrUextra 26009554 26010160 -2994496 + TART LINE telomeric 9212 9821 -4656 1 783 886 87 6 37 chrUextra 26010260 26010450 -2994206 + Gypsy8_LTR LTR Gypsy 54 304 0 1 783 1238 128 8 45 chrUextra 26010424 26010669 -2993987 + Gypsy8_I LTR Gypsy 1 236 -4111 1 783 360 107 0 0 chrUextra 26011063 26011119 -2993537 + DNAREP1_DM LINE Penelope 386 441 -153 1 783 870 9 0 27 chrUextra 26011733 26011845 -2992811 + NTS_DM Other Other 25 133 -107 1 783 1192 18 0 18 chrUextra 26011845 26012012 -2992644 + NTS_DM Other Other 38 201 -39 1 783 22 35 0 0 chrUextra 26012012 26012041 -2992615 + AT_rich Low_complexity Low_complexity 1 29 0 1 783 378 35 0 17 chrUextra 26012056 26012114 -2992542 + NTS_DM Other Other 145 201 -39 1 783 870 9 0 27 chrUextra 26012166 26012278 -2992378 + NTS_DM Other Other 25 133 -107 1 783 264 30 0 0 chrUextra 26012278 26012311 -2992345 + NTS_DM Other Other 38 70 -170 1 783 488 119 36 0 chrUextra 26012485 26012569 -2992087 - NTS_DM Other Other -150 90 4 1 783 1301 6 0 18 chrUextra 26012679 26012844 -2991812 - NTS_DM Other Other -78 162 1 1 783 1307 11 22 16 chrUextra 26012844 26013028 -2991628 - NTS_DM Other Other 0 240 56 1 783 5208 2 0 0 chrUextra 26013128 26013722 -2990934 - LSU-rRNA_Dme rRNA rRNA -667 3233 2640 1 783 2653 174 13 8 chrUextra 26013845 26014447 -2990209 - SAR_DM Satellite Satellite -542 930 326 1 783 1192 25 0 18 chrUextra 26014562 26014727 -2989929 - NTS_DM Other Other -78 162 1 1 783 1756 17 17 17 chrUextra 26014727 26014967 -2989689 - NTS_DM Other Other 0 240 1 1 783 1504 19 19 19 chrUextra 26014967 26015179 -2989477 - NTS_DM Other Other 0 240 29 1 783 246 150 0 0 chrUextra 26015358 26015398 -2989258 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 783 22 56 0 0 chrUextra 26015403 26015439 -2989217 + AT_rich Low_complexity Low_complexity 1 36 0 1 783 3381 0 0 0 chrUextra 26015511 26015896 -2988760 - LSU-rRNA_Dme rRNA rRNA 0 3900 3516 1 783 4308 6 4 0 chrUextra 26015996 26016501 -2988155 - R1_DM LINE R1 -4849 507 1 1 783 455 36 0 0 chrUextra 26016501 26016556 -2988100 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2578 1 783 480 0 0 0 chrUextra 26016552 26016613 -2988043 - R2_DM LINE R2 -2 3605 3545 1 783 369 0 0 0 chrUextra 26016713 26016754 -2987902 + (TTCTC)n Simple_repeat Simple_repeat 5 45 0 1 783 1020 39 0 0 chrUextra 26017919 26018047 -2986609 + PROTOP_B DNA P 74 201 -952 1 783 32 0 0 0 chrUextra 26018208 26018240 -2986416 + AT_rich Low_complexity Low_complexity 1 32 0 1 783 3433 3 0 0 chrUextra 26018372 26018764 -2985892 + SSU-rRNA_Dme rRNA rRNA 1 392 -1603 1 783 369 66 234 13 chrUextra 26018864 26018938 -2985718 - BATUMI_I LTR Pao -871 7092 7002 1 783 4190 37 0 6 chrUextra 26018938 26019481 -2985175 - BATUMI_I LTR Pao 0 7963 7424 1 783 2348 115 7 21 chrUextra 26019615 26020198 -2984458 - DMSAT6 Satellite Satellite 0 574 1 1 783 798 189 0 0 chrUextra 26020309 26020484 -2984172 + (TATG)n Simple_repeat Simple_repeat 2 176 0 1 783 234 203 125 0 chrUextra 26020486 26020550 -2984106 + OSVALDO_LTR LTR Gypsy 12 83 -1113 1 783 865 192 0 6 chrUextra 26020559 26020915 -2983741 + (TATG)n Simple_repeat Simple_repeat 1 354 0 1 783 3554 54 42 2 chrUextra 26021088 26021632 -2983024 - PROTOP_A DNA P 0 1105 570 1 783 2318 95 24 26 chrUextra 26021732 26022349 -2982307 + DMSAT6 Satellite Satellite 1 616 -51 1 783 2518 188 8 10 chrUextra 26022449 26023060 -2981596 + SAR_DM Satellite Satellite 467 1076 -396 1 783 1931 263 15 15 chrUextra 26023167 26023781 -2980875 - G6_DM LINE Jockey -879 1163 550 1 783 5142 2 2 2 chrUextra 26023883 26024500 -2980156 + R1_DM LINE R1 617 1233 -4123 1 783 5263 2 0 0 chrUextra 26024600 26025217 -2979439 + ROO_I LTR Pao 4827 5443 -2813 1 783 2073 38 0 4 chrUextra 26026034 26026298 -2978358 + MAX_I LTR Pao 2562 2824 -5090 1 783 2996 22 0 0 chrUextra 26026290 26026651 -2978005 + MAX_I LTR Pao 3152 3512 -4402 1 783 3683 0 0 2 chrUextra 26027662 26028085 -2976571 - ROO_LTR LTR Pao 0 428 7 1 783 1124 24 23 23 chrUextra 26028902 26029076 -2975580 + NTS_DM Other Other 67 240 0 1 783 1704 21 17 21 chrUextra 26029076 26029317 -2975339 + NTS_DM Other Other 1 240 0 1 783 1128 8 0 0 chrUextra 26029317 26029450 -2975206 + NTS_DM Other Other 1 133 -107 1 783 598 0 0 0 chrUextra 26029450 26029519 -2975137 + NTS_DM Other Other 38 106 -134 1 783 304 302 0 0 chrUextra 26029621 26029727 -2974929 - Invader2_I LTR Gypsy -1863 2729 2624 1 783 269 305 65 65 chrUextra 26029740 26030157 -2974499 - BLASTOPIA_I LTR Gypsy -1885 2596 2180 1 783 2751 166 11 11 chrUextra 26030336 26030953 -2973703 - SAR_DM Satellite Satellite -480 992 376 1 783 2442 192 8 11 chrUextra 26031770 26032387 -2972269 - SAR_DM Satellite Satellite -1078 614 1 1 783 2257 8 0 0 chrUextra 26032487 26032752 -2971904 - FW_DM LINE Jockey -2030 2662 2398 1 783 413 79 0 0 chrUextra 26032748 26032811 -2971845 + PROTOP_B DNA P 238 300 -853 1 783 1191 52 87 0 chrUextra 26032798 26033104 -2971552 + PROTOP_B DNA P 520 754 -399 1 783 702 22 11 0 chrUextra 26033204 26033294 -2971362 + DOC2_DM LINE Jockey 3833 3923 -870 1 783 4486 9 2 0 chrUextra 26033292 26033821 -2970835 + DOC2_DM LINE Jockey 1852 2381 -2412 1 783 4914 8 29 0 chrUextra 26033950 26034538 -2970118 + G2_DM LINE Jockey 4 608 -2494 1 783 1620 0 0 0 chrUextra 26034638 26035027 -2969629 + (GAGAA)n Simple_repeat Simple_repeat 1 389 0 1 783 1074 262 34 34 chrUextra 26035355 26035861 -2968795 + SAR_DM Satellite Satellite 246 751 -721 1 783 245 210 16 16 chrUextra 26036072 26036135 -2968521 + HETRP_DM Satellite Satellite 1607 1669 -203 1 783 192 40 0 0 chrUextra 26036266 26036291 -2968365 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 783 491 208 8 16 chrUextra 26036291 26036413 -2968243 + HETRP_DM Satellite Satellite 1549 1669 -203 1 783 507 196 0 9 chrUextra 26036580 26036688 -2967968 + HETRP_DM Satellite Satellite 1529 1635 -237 1 783 28 48 0 0 chrUextra 26037014 26037056 -2967600 + AT_rich Low_complexity Low_complexity 1 42 0 1 783 21 0 0 0 chrUextra 26037385 26037406 -2967250 + AT_rich Low_complexity Low_complexity 1 21 0 1 783 2969 11 3 24 chrUextra 26037518 26037893 -2966763 + ROVER-LTR_DM LTR Gypsy 1 367 0 1 783 1048 16 0 0 chrUextra 26037893 26038016 -2966640 + ROVER-I_DM LTR Gypsy 1 123 -6461 1 783 459 18 0 0 chrUextra 26038067 26038123 -2966533 + ROVER-I_DM LTR Gypsy 103 158 -6426 1 783 823 18 0 35 chrUextra 26038225 26038338 -2966318 - NTS_DM Other Other -107 133 25 1 783 1252 18 0 6 chrUextra 26038390 26038555 -2966101 - NTS_DM Other Other -39 201 38 1 783 870 9 0 27 chrUextra 26038555 26038667 -2965989 - NTS_DM Other Other -107 133 25 1 783 818 25 0 8 chrUextra 26038719 26038840 -2965816 - NTS_DM Other Other -39 201 82 1 783 965 27 26 20 chrUextra 26038940 26039091 -2965565 + NTS_DM Other Other 89 240 0 1 783 1128 8 0 0 chrUextra 26039091 26039224 -2965432 + NTS_DM Other Other 1 133 -107 1 783 1252 18 0 6 chrUextra 26039224 26039389 -2965267 + NTS_DM Other Other 38 201 -39 1 783 21 57 0 0 chrUextra 26039389 26039424 -2965232 + AT_rich Low_complexity Low_complexity 1 35 0 1 783 774 10 19 28 chrUextra 26039450 26039557 -2965099 + NTS_DM Other Other 25 130 -110 1 783 5230 0 0 0 chrUextra 26039657 26040274 -2964382 - Invader3_I LTR Gypsy -236 4652 4036 1 783 260 277 115 93 chrUextra 26040559 26040838 -2963818 + Invader1_LTR LTR Gypsy 84 368 -55 1 783 5266 2 3 3 chrUextra 26041091 26041708 -2962948 + LSU-rRNA_Dme rRNA rRNA 932 1548 -2352 1 783 2190 193 78 16 chrUextra 26041809 26042424 -2962232 + SAR_DM Satellite Satellite 604 1256 -216 1 783 5161 7 0 3 chrUextra 26042525 26043141 -2961515 - DOC LINE Jockey -1663 3062 2449 1 783 3943 43 34 62 chrUextra 26043242 26043857 -2960799 - BATUMI_I LTR Pao -4838 3125 2528 1 783 2520 170 32 7 chrUextra 26043973 26044570 -2960086 + SAR_DM Satellite Satellite 349 960 -512 1 783 2422 97 21 21 chrUextra 26044673 26045287 -2959369 + DMSAT6 Satellite Satellite 1 614 -74 1 783 1362 56 0 0 chrUextra 26045814 26045994 -2958662 + (ATAAG)n Simple_repeat Simple_repeat 1 180 0 1 783 2555 188 5 7 chrUextra 26046105 26046701 -2957955 - SAR_DM Satellite Satellite -683 789 195 1 783 718 97 0 0 chrUextra 26046608 26046721 -2957935 + ARS406_DM Unknown Unknown 1 113 -240 1 783 1186 110 5 5 chrUextra 26046821 26047013 -2957643 + BS2 LINE Jockey 66 257 -4464 1 783 1797 44 12 8 chrUextra 26047012 26047266 -2957390 - G5_DM LINE Jockey 0 4856 4602 1 783 1298 58 12 0 chrUextra 26047263 26047436 -2957220 - G5_DM LINE Jockey -489 4367 4193 1 783 1598 301 10 16 chrUextra 26047537 26048148 -2956508 - MICROPIA_I LTR Gypsy -1073 3403 2797 1 783 4941 29 0 2 chrUextra 26048253 26048869 -2955787 - DMCR1A LINE CR1 -1691 2779 2165 1 783 5164 2 0 2 chrUextra 26048970 26049567 -2955089 - LSU-rRNA_Dme rRNA rRNA -1517 2383 1788 1 783 1267 7 0 0 chrUextra 26049685 26049835 -2954821 + MDG1_I LTR Gypsy 5718 5867 -729 1 783 714 54 222 45 chrUextra 26049841 26050023 -2954633 + MDG1_I LTR Gypsy 6393 6596 0 1 783 372 88 0 0 chrUextra 26050029 26050086 -2954570 + (TAA)n Simple_repeat Simple_repeat 3 59 0 1 783 1419 75 103 0 chrUextra 26050088 26050301 -2954355 + MDG1_LTR LTR Gypsy 94 328 -114 1 783 5227 3 2 3 chrUextra 26050404 26051017 -2953639 + LSU-rRNA_Dme rRNA rRNA 954 1565 -2335 1 783 2596 181 32 11 chrUextra 26051117 26051733 -2952923 + SAR_DM Satellite Satellite 257 885 -587 1 783 4920 2 0 0 chrUextra 26051833 26052407 -2952249 + FW_DM LINE Jockey 4119 4692 0 1 783 331 24 0 0 chrUextra 26052407 26052449 -2952207 - DOC2_DM LINE Jockey -4037 756 715 1 783 5119 0 2 3 chrUextra 26052549 26053165 -2951491 - LSU-rRNA_Dme rRNA rRNA -3061 839 225 1 783 4624 47 2 2 chrUextra 26053265 26053881 -2950775 + MDG3_I LTR Gypsy 1194 1809 -3177 1 783 2776 172 10 10 chrUextra 26053981 26054597 -2950059 + SAR_DM Satellite Satellite 422 1037 -435 1 783 5191 11 3 0 chrUextra 26054700 26055313 -2949343 - MDG3_I LTR Gypsy -3396 1590 976 1 783 2199 111 28 40 chrUextra 26055422 26056004 -2948652 - DMSAT6 Satellite Satellite -89 574 1 1 783 357 129 14 14 chrUextra 26056129 26056200 -2948456 + ARS406_DM Unknown Unknown 119 189 -164 1 783 3039 276 53 29 chrUextra 26056156 26057461 -2947195 - SAR_DM Satellite Satellite -261 1336 1 1 783 2335 104 26 21 chrUextra 26057564 26058176 -2946480 - DMSAT6 Satellite Satellite -268 614 1 1 783 219 33 0 116 chrUextra 26058277 26058346 -2946310 + (TTTTTA)n Simple_repeat Simple_repeat 4 64 0 1 783 2302 50 96 65 chrUextra 26058993 26059608 -2945048 + ROO_I LTR Pao 536 1592 -6664 1 783 2688 184 10 5 chrUextra 26059709 26060325 -2944331 + SAR_DM Satellite Satellite 256 874 -598 1 783 5049 28 0 0 chrUextra 26060425 26061041 -2943615 - R1_DM LINE R1 -1963 3393 2778 1 783 27 29 0 0 chrUextra 26061550 26061584 -2943072 + AT_rich Low_complexity Low_complexity 1 34 0 1 783 4869 3 0 26 chrUextra 26061857 26062473 -2942183 - ROO_I LTR Pao -7477 779 180 1 783 1813 273 13 23 chrUextra 26062573 26063188 -2941468 + Invader4_I LTR Gypsy 240 848 -1565 1 783 1286 65 59 0 chrUextra 26063290 26063476 -2941180 - MAX_LTR LTR Pao -124 197 1 1 783 2680 40 0 0 chrUextra 26063479 26063827 -2940829 - MAX_I LTR Pao -1 7913 7566 1 783 767 22 0 0 chrUextra 26063813 26063905 -2940751 - MAX_I LTR Pao -2848 5066 4975 1 783 1339 0 0 24 chrUextra 26064005 26064173 -2940483 - Gypsy_I LTR Gypsy -6343 164 1 1 783 3643 29 4 2 chrUextra 26064171 26064621 -2940035 - Gypsy_LTR LTR Gypsy 0 482 32 1 783 519 44 0 0 chrUextra 26064726 26064794 -2939862 - R1_DM LINE R1 -5288 68 1 1 783 4253 16 2 0 chrUextra 26064827 26065337 -2939319 - R1_DM LINE R1 0 5356 4846 1 783 21 95 0 0 chrUextra 26065495 26065558 -2939098 + AT_rich Low_complexity Low_complexity 1 63 0 1 783 3760 0 0 54 chrUextra 26065570 26066053 -2938603 + LSU-rRNA_Dme rRNA rRNA 1 457 -3443 1 783 5107 0 2 3 chrUextra 26066153 26066769 -2937887 + R1_DM LINE R1 617 1231 -4125 1 783 2673 182 8 5 chrUextra 26066869 26067483 -2937173 - SAR_DM Satellite Satellite -620 852 237 1 783 764 11 11 0 chrUextra 26067585 26067680 -2936976 + NTS_DM Other Other 38 133 -107 1 783 1252 18 0 6 chrUextra 26067680 26067845 -2936811 + NTS_DM Other Other 38 201 -39 1 783 870 9 0 27 chrUextra 26067897 26068009 -2936647 + NTS_DM Other Other 25 133 -107 1 783 1252 18 0 6 chrUextra 26068009 26068174 -2936482 + NTS_DM Other Other 38 201 -39 1 783 2360 99 13 34 chrUextra 26068301 26068917 -2935739 + DMSAT6 Satellite Satellite 1 602 -85 1 783 2832 168 10 10 chrUextra 26069018 26069633 -2935023 - SAR_DM Satellite Satellite -439 1033 419 1 783 2807 159 12 12 chrUextra 26069733 26070339 -2934317 + SAR_DM Satellite Satellite 389 994 -478 1 783 726 0 0 0 chrUextra 26070449 26070536 -2934120 + NTS_DM Other Other 47 133 -107 1 783 1361 25 20 25 chrUextra 26070536 26070740 -2933916 + NTS_DM Other Other 38 240 0 1 783 1734 21 17 17 chrUextra 26070740 26070980 -2933676 + NTS_DM Other Other 1 240 0 1 783 732 12 0 0 chrUextra 26070980 26071065 -2933591 + NTS_DM Other Other 1 85 -155 1 783 3060 104 68 34 chrUextra 26071165 26071781 -2932875 - STALKER4_I LTR Gypsy -5260 1270 634 1 783 5133 24 0 0 chrUextra 26071881 26072497 -2932159 - MAX_I LTR Pao -5466 2448 1833 1 783 478 0 0 0 chrUextra 26072599 26072654 -2932002 - NTS_DM Other Other -148 92 38 1 783 870 9 0 27 chrUextra 26072654 26072766 -2931890 - NTS_DM Other Other -107 133 25 1 783 1252 18 0 6 chrUextra 26072819 26072984 -2931672 - NTS_DM Other Other -39 201 38 1 783 870 9 0 27 chrUextra 26072984 26073096 -2931560 - NTS_DM Other Other -107 133 25 1 783 22 56 0 0 chrUextra 26073122 26073158 -2931498 + AT_rich Low_complexity Low_complexity 1 36 0 1 783 255 125 0 0 chrUextra 26073171 26073211 -2931445 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 783 1494 74 8 2 chrUextra 26073313 26073929 -2930727 + (CTATT)n Simple_repeat Simple_repeat 1 619 0 1 783 4784 26 18 0 chrUextra 26074029 26074645 -2930011 + ROO_I LTR Pao 686 1312 -6944 1 783 5144 8 2 3 chrUextra 26074745 26075361 -2929295 - R1_DM LINE R1 -1339 4017 3403 1 783 5239 2 5 3 chrUextra 26076893 26077509 -2927147 - SSU-rRNA_Dme rRNA rRNA -268 1727 1111 1 783 34 24 0 0 chrUextra 26077860 26077901 -2926755 + AT_rich Low_complexity Low_complexity 1 41 0 1 783 24 91 0 0 chrUextra 26078111 26078177 -2926479 + AT_rich Low_complexity Low_complexity 1 66 0 1 783 296 0 0 0 chrUextra 26078189 26078225 -2926431 + LSU-rRNA_Dme rRNA rRNA 1 36 -3864 1 783 2753 179 10 8 chrUextra 26078325 26078938 -2925718 + SAR_DM Satellite Satellite 434 1047 -425 1 783 5221 3 3 3 chrUextra 26079041 26079657 -2924999 - LSU-rRNA_Dme rRNA rRNA -2257 1643 1028 1 783 920 73 9 22 chrUextra 26079757 26080324 -2924332 + RSP Satellite Satellite 1 559 0 1 783 5157 3 0 0 chrUextra 26080473 26081089 -2923567 - ROO_I LTR Pao -4190 4066 3451 1 783 2771 170 10 8 chrUextra 26081194 26081804 -2922852 + SAR_DM Satellite Satellite 369 979 -493 1 783 886 54 15 0 chrUextra 26081905 26082023 -2922633 - NINJA_I LTR Pao -5227 784 665 1 783 4319 2 0 0 chrUextra 26082023 26082521 -2922135 - ACCORD_LTR LTR Gypsy 0 558 61 1 783 1620 16 0 12 chrUextra 26082621 26083222 -2921434 + (AGATG)n Simple_repeat Simple_repeat 1 594 0 1 784 28 48 0 0 chrUextra 26083622 26083664 -2920992 + AT_rich Low_complexity Low_complexity 1 42 0 1 784 424 0 36 0 chrUextra 26083883 26083939 -2920717 + (TA)n Simple_repeat Simple_repeat 2 59 0 1 784 2224 146 178 43 chrUextra 26084065 26084667 -2919989 + TART LINE telomeric 9549 10231 -4246 1 784 1509 0 0 0 chrUextra 26085485 26085665 -2918991 - NTS_DM Other Other -60 180 1 1 784 1868 4 12 12 chrUextra 26085665 26085905 -2918751 - NTS_DM Other Other 0 240 1 1 784 1331 26 20 20 chrUextra 26085905 26086101 -2918555 - NTS_DM Other Other 0 240 45 1 784 4597 54 0 2 chrUextra 26086202 26086817 -2917839 + TAHRE LINE telomeric 5752 6365 -4098 1 784 2947 119 28 39 chrUextra 26086917 26087527 -2917129 + TART LINE telomeric 9547 10149 -4328 1 784 1158 7 0 0 chrUextra 26087633 26087772 -2916884 + R1_DM LINE R1 4928 5066 -290 1 784 936 27 0 0 chrUextra 26087771 26087883 -2916773 + R1_DM LINE R1 5245 5356 0 1 784 2388 54 15 6 chrUextra 26087916 26088249 -2916407 + R1_DM LINE R1 1 336 -5020 1 784 21 0 0 0 chrUextra 26088376 26088397 -2916259 + AT_rich Low_complexity Low_complexity 1 21 0 1 784 2608 69 8 3 chrUextra 26088428 26088790 -2915866 + Gypsy10_LTR LTR Gypsy 1 364 0 1 784 1154 109 0 0 chrUextra 26088790 26088965 -2915691 + Gypsy10_I LTR Gypsy 1 175 -5103 1 784 4841 28 55 0 chrUextra 26089065 26089681 -2914975 - R1_DM LINE R1 -2175 3181 2532 1 784 4645 18 9 0 chrUextra 26090547 26091110 -2913546 - R1_DM LINE R1 0 5356 4789 1 784 4707 31 45 2 chrUextra 26091213 26091820 -2912836 - R1_DM LINE R1 -1808 3548 2916 1 784 2619 173 12 10 chrUextra 26091950 26092545 -2912111 - SAR_DM Satellite Satellite -396 1076 481 1 784 2513 161 20 46 chrUextra 26092646 26093259 -2911397 + SAR_DM Satellite Satellite 274 870 -602 1 784 3329 241 17 42 chrUextra 26093366 26094693 -2909963 - SAR_DM Satellite Satellite -872 1293 1 1 784 2866 169 7 8 chrUextra 26094799 26095409 -2909247 + SAR_DM Satellite Satellite 425 1033 -439 1 784 345 0 0 22 chrUextra 26095509 26095554 -2909102 + LSU-rRNA_Dme rRNA rRNA 1745 1788 -2112 1 784 4552 2 0 2 chrUextra 26095598 26096124 -2908532 + LSU-rRNA_Dme rRNA rRNA 1788 2312 -1588 1 784 2538 171 13 18 chrUextra 26096224 26096839 -2907817 - SAR_DM Satellite Satellite -486 986 375 1 784 5253 0 2 5 chrUextra 26096939 26097554 -2907102 + SSU-rRNA_Dme rRNA rRNA 786 1398 -597 1 784 2796 180 8 5 chrUextra 26097654 26098267 -2906389 + SAR_DM Satellite Satellite 256 870 -602 1 784 567 0 0 0 chrUextra 26098369 26098432 -2906224 + (GAGAA)n Simple_repeat Simple_repeat 4 66 0 1 784 2052 183 10 10 chrUextra 26099084 26099685 -2904971 + SAR_DM Satellite Satellite 1 601 -677 1 784 5048 24 2 0 chrUextra 26099799 26100414 -2904242 - R1_DM LINE R1 -693 4663 4048 1 784 5299 2 2 2 chrUextra 26100514 26101129 -2903527 - LSU-rRNA_Dme rRNA rRNA -1339 2561 1947 1 784 3254 57 283 2 chrUextra 26101944 26102559 -2902097 + DOC4_DM LINE Jockey 771 1558 -1233 1 784 1921 187 9 11 chrUextra 26102666 26103130 -2901526 - SAR_DM Satellite Satellite -514 958 496 1 784 644 63 53 0 chrUextra 26103135 26103230 -2901426 + ARS406_DM Unknown Unknown 90 189 -164 1 784 612 150 39 16 chrUextra 26103145 26103274 -2901382 - SAR_DM Satellite Satellite -569 903 772 1 784 5263 0 3 3 chrUextra 26104089 26104704 -2899952 - SSU-rRNA_Dme rRNA rRNA -578 1417 803 1 784 5335 0 0 2 chrUextra 26105519 26106134 -2898522 - SSU-rRNA_Dme rRNA rRNA -923 1072 459 1 784 2664 174 8 8 chrUextra 26106238 26106846 -2897810 + SAR_DM Satellite Satellite 288 895 -577 1 784 4152 79 78 13 chrUextra 26106949 26107564 -2897092 + Gypsy12_I LTR Gypsy 4640 5294 -252 1 784 5220 3 2 3 chrUextra 26107664 26108279 -2896377 + LSU-rRNA_Dme rRNA rRNA 785 1398 -2502 1 784 1225 13 7 0 chrUextra 26108379 26108531 -2896125 - Stalker3_LTR LTR Gypsy -219 153 1 1 784 281 59 0 44 chrUextra 26108531 26108601 -2896055 - STALKER4_I LTR Gypsy 0 6530 6491 1 784 183 114 0 0 chrUextra 26108611 26108646 -2896010 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 1 784 3159 68 27 2 chrUextra 26109094 26109536 -2895120 + R1_DM LINE R1 938 1390 -3966 1 784 1231 35 0 0 chrUextra 26109537 26109709 -2894947 - FW_DM LINE Jockey -4 4688 4517 1 784 2195 195 29 10 chrUextra 26109809 26110405 -2894251 - SAR_DM Satellite Satellite -676 796 190 1 784 492 188 0 8 chrUextra 26110306 26110424 -2894232 + ARS406_DM Unknown Unknown 1 117 -236 1 784 2878 25 22 3 chrUextra 26110524 26110883 -2893773 + DMCR1A LINE CR1 1038 1403 -3067 1 784 1946 21 4 0 chrUextra 26110903 26111139 -2893517 + DMCR1A LINE CR1 2915 3151 -1319 1 784 1188 33 21 27 chrUextra 26111239 26111426 -2893230 + NTS_DM Other Other 55 240 0 1 784 1866 25 12 21 chrUextra 26111426 26111668 -2892988 + NTS_DM Other Other 1 240 0 1 784 1563 22 0 5 chrUextra 26111668 26111854 -2892802 + NTS_DM Other Other 1 185 -55 1 784 1629 170 10 5 chrUextra 26112670 26113284 -2891372 + SAR_DM Satellite Satellite 1 616 -836 1 784 4337 116 0 0 chrUextra 26113388 26113999 -2890657 - Gypsy_I LTR Gypsy -205 6302 5692 1 784 2842 158 32 22 chrUextra 26114100 26114695 -2889961 - SAR_DM Satellite Satellite -645 827 227 1 784 936 169 17 0 chrUextra 26114814 26114992 -2889664 + SAR_DM Satellite Satellite 623 803 -669 1 784 3725 11 0 9 chrUextra 26114992 26115429 -2889227 - DOC LINE Jockey 0 4725 4293 1 784 1611 174 10 5 chrUextra 26115529 26116143 -2888513 - SAR_DM Satellite Satellite -659 616 1 1 784 1028 92 10 20 chrUextra 26116255 26116839 -2887817 + RSP Satellite Satellite 1 578 0 1 784 5628 5 0 0 chrUextra 26116959 26117574 -2887082 + LSU-rRNA_Dme rRNA rRNA 536 1150 -2750 1 784 3148 14 0 0 chrUextra 26117674 26118020 -2886636 + BATUMI_I LTR Pao 5343 5688 -2275 1 784 2310 40 0 0 chrUextra 26118016 26118289 -2886367 - BATUMI_I LTR Pao -3024 4939 4667 1 784 2323 70 3 78 chrUextra 26118389 26118993 -2885663 - DMSAT6 Satellite Satellite -116 558 1 1 784 5423 11 2 0 chrUextra 26119104 26119719 -2884937 + Invader2_I LTR Gypsy 3551 4166 -426 1 784 240 172 46 15 chrUextra 26119822 26119887 -2884769 - HMSBEAGLE_I LTR Gypsy -6308 221 155 1 784 240 172 46 15 chrUextra 26120096 26120161 -2884495 - HMSBEAGLE_I LTR Gypsy -6308 221 155 1 784 266 128 0 21 chrUextra 26120370 26120418 -2884238 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 784 3012 179 23 3 chrUextra 26121252 26121864 -2882792 + SAR_DM Satellite Satellite 246 869 -603 1 784 5246 29 5 0 chrUextra 26121964 26122579 -2882077 + R1_DM LINE R1 2482 3099 -2257 1 784 274 50 24 24 chrUextra 26122679 26122720 -2881936 + ARS406_DM Unknown Unknown 149 189 -164 1 784 3028 176 5 5 chrUextra 26122687 26123276 -2881380 - SAR_DM Satellite Satellite -625 847 259 1 784 3042 275 41 53 chrUextra 26123394 26124342 -2880314 + SAR_DM Satellite Satellite 260 1196 -276 1 784 463 82 0 0 chrUextra 26124362 26124423 -2880233 + FB4_DM DNA Tc1 2 62 -4027 1 784 1456 128 112 31 chrUextra 26124402 26124724 -2879932 - FB4_DM DNA Tc1 -3357 732 385 1 784 2672 89 11 31 chrUextra 26124824 26125439 -2879217 - DMSAT6 Satellite Satellite -80 603 1 1 784 3359 40 8 0 chrUextra 26125539 26125938 -2878718 - R1_DM LINE R1 -3638 1718 1317 1 784 1925 23 0 0 chrUextra 26125936 26126154 -2878502 - R1_DM LINE R1 -3528 1828 1611 1 784 3085 171 10 10 chrUextra 26126254 26126869 -2877787 - SAR_DM Satellite Satellite -515 957 343 1 784 3389 129 10 13 chrUextra 26126969 26127580 -2877076 + SAR_DM Satellite Satellite 287 895 -577 1 784 2543 88 7 65 chrUextra 26127707 26128297 -2876359 - DMSAT6 Satellite Satellite 0 555 1 1 784 5587 3 0 0 chrUextra 26128399 26129014 -2875642 + R1_DM LINE R1 2383 2997 -2359 1 784 5436 11 0 0 chrUextra 26129115 26129729 -2874927 - STALKER4_I LTR Gypsy -466 6064 5451 1 784 2866 189 10 7 chrUextra 26129829 26130441 -2874215 + SAR_DM Satellite Satellite 278 891 -581 1 784 2050 5 0 0 chrUextra 26130854 26131078 -2873578 + DIVER_LTR LTR Pao 1 224 0 1 784 530 0 17 0 chrUextra 26131099 26131159 -2873497 + DIVER_I LTR Pao 1 61 -5582 1 784 5482 11 2 0 chrUextra 26131259 26131874 -2872782 + R1_DM LINE R1 1594 2209 -3147 1 784 269 133 0 0 chrUextra 26131974 26132019 -2872637 - ARS406_DM Unknown Unknown -308 45 1 1 784 2970 173 10 10 chrUextra 26131979 26132581 -2872075 + SAR_DM Satellite Satellite 246 847 -625 1 784 256 100 25 0 chrUextra 26132549 26132589 -2872067 - ARS406_DM Unknown Unknown -164 189 149 1 784 2704 186 13 19 chrUextra 26132689 26133304 -2871352 + SAR_DM Satellite Satellite 394 1004 -468 1 784 5446 13 0 2 chrUextra 26133404 26134019 -2870637 - G2_DM LINE Jockey -760 2342 1729 1 784 2258 59 0 34 chrUextra 26134205 26134502 -2870154 - Gypsy4_LTR LTR Gypsy 0 287 1 1 784 2082 9 0 4 chrUextra 26134502 26134734 -2869922 - Gypsy4_I LTR Gypsy 0 6288 6058 1 784 268 196 0 19 chrUextra 26134942 26134994 -2869662 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 784 268 196 0 19 chrUextra 26135034 26135086 -2869570 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 784 268 196 0 19 chrUextra 26135126 26135178 -2869478 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 784 278 176 0 19 chrUextra 26135209 26135261 -2869395 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 784 22 56 0 0 chrUextra 26135274 26135310 -2869346 + AT_rich Low_complexity Low_complexity 1 36 0 1 784 915 18 0 27 chrUextra 26135337 26135449 -2869207 + NTS_DM Other Other 25 133 -107 1 784 1554 149 57 158 chrUextra 26136264 26136878 -2867778 + BATUMI_I LTR Pao 482 1033 -6930 1 784 1386 0 0 0 chrUextra 26137694 26137848 -2866808 + (GAGAA)n Simple_repeat Simple_repeat 2 155 0 1 784 414 189 0 0 chrUextra 26138412 26138518 -2866138 + (AATAG)n Simple_repeat Simple_repeat 4 109 0 1 784 5567 5 0 0 chrUextra 26139124 26139739 -2864917 + R1_DM LINE R1 1621 2235 -3121 1 784 1678 239 25 33 chrUextra 26139848 26139938 -2864718 - SAR_DM Satellite Satellite -667 805 587 1 784 2342 117 3 6 chrUextra 26139938 26140300 -2864356 + XDMR Unknown Unknown 1 361 0 1 784 1678 239 25 33 chrUextra 26140300 26140453 -2864203 - SAR_DM Satellite Satellite -667 586 206 1 784 5607 2 2 3 chrUextra 26140555 26141169 -2863487 + LSU-rRNA_Dme rRNA rRNA 807 1419 -2481 1 784 3963 14 30 8 chrUextra 26142711 26143212 -2861444 + DM176_I LTR Gypsy 1 512 -5908 1 784 65 25 0 0 chrUextra 26143222 26143301 -2861355 + AT_rich Low_complexity Low_complexity 1 79 0 1 784 694 11 41 31 chrUextra 26144129 26144227 -2860429 + NTS_DM Other Other 142 240 0 1 784 1995 4 17 13 chrUextra 26144227 26144466 -2860190 + NTS_DM Other Other 1 240 0 1 784 2006 0 17 13 chrUextra 26144466 26144705 -2859951 + NTS_DM Other Other 1 240 0 1 784 330 0 0 0 chrUextra 26144708 26144744 -2859912 + NTS_DM Other Other 5 40 -200 1 784 2488 87 43 27 chrUextra 26144855 26145459 -2859197 - DMSAT6 Satellite Satellite 0 614 1 1 784 1620 0 0 0 chrUextra 26145990 26146170 -2858486 + (CTTAT)n Simple_repeat Simple_repeat 1 180 0 1 784 2607 93 34 7 chrUextra 26146274 26146889 -2857767 - DMSAT6 Satellite Satellite -64 631 1 1 784 5703 2 0 2 chrUextra 26146989 26147604 -2857052 + SSU-rRNA_Dme rRNA rRNA 515 1128 -867 1 784 1848 0 0 0 chrUextra 26148419 26148628 -2856028 - NOMAD_LTR LTR Gypsy -309 209 1 1 784 1605 21 0 5 chrUextra 26149134 26149325 -2855331 - NTS_DM Other Other -50 190 1 1 784 1878 21 17 17 chrUextra 26149325 26149565 -2855091 - NTS_DM Other Other 0 240 1 1 784 1279 33 22 22 chrUextra 26149565 26149749 -2854907 - NTS_DM Other Other 0 240 57 1 784 5257 23 0 2 chrUextra 26149849 26150463 -2854193 - R1_DM LINE R1 -2206 3150 2538 1 784 3125 169 18 7 chrUextra 26150564 26151179 -2853477 - SAR_DM Satellite Satellite -518 954 333 1 784 943 18 0 17 chrUextra 26151994 26152109 -2852547 - DOC2_DM LINE Jockey -4674 119 7 1 784 2619 160 10 4 chrUextra 26152118 26152609 -2852047 + SAR_DM Satellite Satellite 380 873 -599 1 784 4559 18 0 0 chrUextra 26152709 26153220 -2851436 + ACCORD2_I LTR Gypsy 2358 2868 -4344 1 784 966 9 0 0 chrUextra 26153212 26153324 -2851332 + ACCORD2_I LTR Gypsy 5527 5638 -1574 1 784 3117 176 8 5 chrUextra 26153425 26154036 -2850620 + SAR_DM Satellite Satellite 267 879 -593 1 784 26 30 0 0 chrUextra 26154186 26154219 -2850437 + AT_rich Low_complexity Low_complexity 1 33 0 1 784 21 89 0 0 chrUextra 26154338 26154394 -2850262 + AT_rich Low_complexity Low_complexity 1 56 0 1 784 2489 191 19 14 chrUextra 26154852 26155440 -2849216 - SAR_DM Satellite Satellite -684 788 198 1 784 545 127 53 26 chrUextra 26155353 26155466 -2849190 + ARS406_DM Unknown Unknown 1 116 -237 1 784 1557 20 19 19 chrUextra 26155566 26155771 -2848885 + NTS_DM Other Other 36 240 0 1 784 1823 17 21 33 chrUextra 26155771 26156014 -2848642 + NTS_DM Other Other 1 240 0 1 784 1338 24 0 12 chrUextra 26156014 26156180 -2848476 + NTS_DM Other Other 1 164 -76 1 784 5150 31 0 0 chrUextra 26156280 26156886 -2847770 + R1_DM LINE R1 2531 3136 -2220 1 784 2707 194 8 10 chrUextra 26156994 26157604 -2847052 + SAR_DM Satellite Satellite 250 858 -614 1 784 2983 181 7 7 chrUextra 26157708 26158320 -2846336 - SAR_DM Satellite Satellite -515 957 346 1 784 2631 186 7 25 chrUextra 26158426 26159033 -2845623 + SAR_DM Satellite Satellite 523 1118 -354 1 784 2361 118 17 28 chrUextra 26159136 26159719 -2844937 - DMSAT6 Satellite Satellite -85 576 1 1 784 1620 4 0 0 chrUextra 26159850 26160317 -2844339 + (GAGAA)n Simple_repeat Simple_repeat 1 467 0 1 784 2750 3 0 3 chrUextra 26160564 26160865 -2843791 + STALKER4_LTR LTR Gypsy 103 402 0 1 784 284 93 47 0 chrUextra 26160881 26160924 -2843732 - PROTOP_B DNA P -1108 45 1 1 784 694 12 11 35 chrUextra 26161278 26161365 -2843291 - NTS_DM Other Other -131 109 25 1 784 1350 18 0 6 chrUextra 26161417 26161582 -2843074 - NTS_DM Other Other -39 201 38 1 784 936 9 0 27 chrUextra 26161582 26161694 -2842962 - NTS_DM Other Other -107 133 25 1 784 1112 28 0 7 chrUextra 26161746 26161892 -2842764 - NTS_DM Other Other -39 201 57 1 784 2936 178 12 5 chrUextra 26161996 26162599 -2842057 - SAR_DM Satellite Satellite -620 852 246 1 784 282 128 0 0 chrUextra 26162559 26162606 -2842050 + ARS406_DM Unknown Unknown 1 47 -306 1 784 2576 95 20 21 chrUextra 26162707 26163320 -2841336 - DMSAT6 Satellite Satellite -86 612 1 1 784 4574 60 68 2 chrUextra 26163421 26164034 -2840622 - R1_DM LINE R1 -4573 783 130 1 784 2819 181 13 13 chrUextra 26164135 26164744 -2839912 + SAR_DM Satellite Satellite 293 901 -571 1 784 979 65 5 18 chrUextra 26164848 26165462 -2839194 - RSP Satellite Satellite -83 606 1 1 784 2210 123 15 20 chrUextra 26165562 26166176 -2838480 + DMSAT6 Satellite Satellite 1 610 -108 1 784 1542 177 9 3 chrUextra 26166287 26166610 -2838046 - ROVER-I_DM LTR Gypsy -270 6314 5990 1 784 1479 155 0 0 chrUextra 26166645 26166890 -2837766 - ROVER-I_DM LTR Gypsy -1276 5308 5064 1 784 667 101 0 0 chrUextra 26166990 26167099 -2837557 - ARS406_DM Unknown Unknown -241 112 4 1 784 2341 179 64 26 chrUextra 26166994 26167604 -2837052 + SAR_DM Satellite Satellite 1 633 -203 1 784 2298 99 15 66 chrUextra 26167704 26168308 -2836348 + DMSAT6 Satellite Satellite 1 573 -74 1 784 2515 126 134 53 chrUextra 26168424 26169028 -2835628 + TART LINE telomeric 9624 10276 -4201 1 784 2861 162 11 8 chrUextra 26169135 26169746 -2834910 + SAR_DM Satellite Satellite 246 858 -614 1 784 639 0 0 0 chrUextra 26169846 26169917 -2834739 + (TTCTC)n Simple_repeat Simple_repeat 2 72 0 1 784 2622 201 16 19 chrUextra 26170560 26171174 -2833482 - SAR_DM Satellite Satellite -549 611 1 1 784 442 99 0 0 chrUextra 26171274 26171345 -2833311 - ARS406_DM Unknown Unknown -282 71 1 1 784 2296 174 32 11 chrUextra 26171283 26171888 -2832768 + SAR_DM Satellite Satellite 1 617 -677 1 784 5081 21 0 0 chrUextra 26171988 26172602 -2832054 - R1_DM LINE R1 -2839 2517 1904 1 784 2926 277 27 29 chrUextra 26172704 26174030 -2830626 - SAR_DM Satellite Satellite -449 1323 1 1 784 1575 194 45 6 chrUextra 26174132 26174744 -2829912 + SAR_DM Satellite Satellite 1 635 -869 1 784 2675 198 23 2 chrUextra 26174851 26175458 -2829198 - DM412 LTR Gypsy -404 6493 5874 1 784 5032 0 0 2 chrUextra 26175558 26176153 -2828503 - LSU-rRNA_Dme rRNA rRNA -3089 811 218 1 784 4808 39 0 5 chrUextra 26176272 26176886 -2827770 + R1_DM LINE R1 1376 1986 -3370 1 784 4626 47 2 2 chrUextra 26177006 26177600 -2827056 - R1_DM LINE R1 -3667 1689 1096 1 784 2804 134 19 42 chrUextra 26177700 26178314 -2826342 - SAR_DM Satellite Satellite -500 972 373 1 784 4428 15 72 2 chrUextra 26178433 26179028 -2825628 - R1_DM LINE R1 -1368 3988 3352 1 784 2124 74 0 55 chrUextra 26179179 26179740 -2824916 + DMSAT6 Satellite Satellite 1 529 -3 1 784 4346 88 0 0 chrUextra 26179842 26180454 -2824202 - STALKER4_I LTR Gypsy -4224 2306 1695 1 784 5116 2 0 3 chrUextra 26181270 26181884 -2822772 - ROO_I LTR Pao -3997 4259 3648 1 784 4990 21 2 2 chrUextra 26181984 26182598 -2822058 + R1_DM LINE R1 3641 4254 -1102 1 784 2485 3 0 77 chrUextra 26182698 26183034 -2821622 - LSU-rRNA_Dme rRNA rRNA -3590 310 1 1 784 21 95 0 0 chrUextra 26183046 26183109 -2821547 + AT_rich Low_complexity Low_complexity 1 63 0 1 784 4929 39 2 0 chrUextra 26183412 26184026 -2820630 - R1_DM LINE R1 -1944 3412 2798 1 784 5364 0 2 0 chrUextra 26184126 26184740 -2819916 + SSU-rRNA_Dme rRNA rRNA 416 1030 -965 1 784 1687 5 0 0 chrUextra 26184840 26185044 -2819612 - NTS_DM Other Other -36 204 1 1 784 1850 4 17 13 chrUextra 26185044 26185283 -2819373 - NTS_DM Other Other 0 240 1 1 784 1203 6 23 18 chrUextra 26185283 26185454 -2819202 - NTS_DM Other Other 0 240 69 1 784 414 0 0 0 chrUextra 26185554 26185600 -2819056 + (TTCTC)n Simple_repeat Simple_repeat 3 48 0 1 784 1578 8 0 0 chrUextra 26185608 26185845 -2818811 + (GAGAA)n Simple_repeat Simple_repeat 1 237 0 1 784 279 79 0 0 chrUextra 26185845 26185883 -2818773 + (GGAGA)n Simple_repeat Simple_repeat 4 41 0 1 784 1524 22 0 0 chrUextra 26185885 26186065 -2818591 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 784 696 68 0 0 chrUextra 26186065 26186168 -2818488 + (CAGAA)n Simple_repeat Simple_repeat 1 103 0 1 784 1915 222 28 33 chrUextra 26186277 26186882 -2817774 - TAHRE LINE telomeric -473 9990 9389 1 784 482 0 0 0 chrUextra 26186982 26187038 -2817618 - ROO_LTR LTR Pao -372 56 1 1 784 3098 169 2 2 chrUextra 26187038 26187596 -2817060 + Gypsy3_I LTR Gypsy 4940 5497 -680 1 784 255 125 0 0 chrUextra 26187743 26187783 -2816873 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 784 22 56 0 0 chrUextra 26187796 26187832 -2816824 + AT_rich Low_complexity Low_complexity 1 36 0 1 784 455 17 0 49 chrUextra 26187858 26187919 -2816737 + NTS_DM Other Other 25 82 -158 1 784 2297 0 0 0 chrUextra 26187919 26188195 -2816461 + Copia_LTR LTR Copia 1 276 0 1 784 927 0 0 9 chrUextra 26188195 26188310 -2816346 + Copia_I LTR Copia 1 114 -4479 1 784 2761 159 10 18 chrUextra 26188411 26189024 -2815632 + SAR_DM Satellite Satellite 267 874 -598 1 784 5173 8 2 2 chrUextra 26189838 26190452 -2814204 - R1_DM LINE R1 -330 5026 4413 1 784 1288 295 11 11 chrUextra 26190578 26191147 -2813509 - MICROPIA_I LTR Gypsy -2183 1916 1336 1 784 44 0 0 0 chrUextra 26191836 26191880 -2812776 + AT_rich Low_complexity Low_complexity 1 44 0 1 784 5362 2 2 0 chrUextra 26191980 26192594 -2812062 + LSU-rRNA_Dme rRNA rRNA 3038 3652 -248 1 784 5227 0 0 0 chrUextra 26192694 26193308 -2811348 - ROO_I LTR Pao -1849 6407 5794 1 784 4939 12 2 15 chrUextra 26193408 26194022 -2810634 - R1_DM LINE R1 -4557 799 194 1 784 1616 55 9 0 chrUextra 26194126 26194346 -2810310 - R1_DM LINE R1 -5134 222 1 1 784 2240 19 151 0 chrUextra 26194379 26194736 -2809920 - R1_DM LINE R1 0 5356 4946 1 784 22 35 0 0 chrUextra 26194836 26194865 -2809791 + AT_rich Low_complexity Low_complexity 1 29 0 1 784 58 15 0 0 chrUextra 26195342 26195407 -2809249 + AT_rich Low_complexity Low_complexity 1 65 0 1 784 2487 202 3 5 chrUextra 26195550 26196156 -2808500 + SAR_DM Satellite Satellite 472 1076 -396 1 784 818 10 0 10 chrUextra 26196264 26196364 -2808292 + (GAGAA)n Simple_repeat Simple_repeat 4 102 0 1 784 198 91 0 0 chrUextra 26196366 26196399 -2808257 + (ATAAG)n Simple_repeat Simple_repeat 1 33 0 1 784 1553 0 0 6 chrUextra 26196399 26196576 -2808080 + (GAGAA)n Simple_repeat Simple_repeat 1 177 0 1 784 3056 95 56 66 chrUextra 26196981 26197589 -2807067 + Gypsy9_I LTR Gypsy 151 752 -3925 1 784 5248 0 3 3 chrUextra 26197692 26198305 -2806351 + SSU-rRNA_Dme rRNA rRNA 1040 1652 -343 1 784 534 120 50 0 chrUextra 26198405 26198505 -2806151 - ARS406_DM Unknown Unknown -248 105 1 1 784 2245 197 22 12 chrUextra 26198417 26199017 -2805639 + SAR_DM Satellite Satellite 195 800 -672 1 784 2380 81 21 13 chrUextra 26199118 26199731 -2804925 + DMSAT6 Satellite Satellite 1 618 -64 1 784 720 11 0 0 chrUextra 26199831 26199919 -2804737 + NTS_DM Other Other 46 133 -107 1 784 1252 18 0 6 chrUextra 26199919 26200084 -2804572 + NTS_DM Other Other 38 201 -39 1 784 870 9 0 27 chrUextra 26200136 26200248 -2804408 + NTS_DM Other Other 25 133 -107 1 784 1187 30 0 12 chrUextra 26200248 26200414 -2804242 + NTS_DM Other Other 38 201 -39 1 784 31 58 0 0 chrUextra 26200573 26200625 -2804031 + AT_rich Low_complexity Low_complexity 1 52 0 1 784 3098 55 4 14 chrUextra 26200713 26201151 -2803505 - STALKER4_LTR LTR Gypsy -3 399 1 1 784 774 11 0 0 chrUextra 26201257 26201347 -2803309 - NTS_DM Other Other -150 90 1 1 784 1301 21 21 21 chrUextra 26201380 26201572 -2803084 - NTS_DM Other Other -11 229 38 1 784 870 9 0 27 chrUextra 26201572 26201684 -2802972 - NTS_DM Other Other -107 133 25 1 784 239 54 0 26 chrUextra 26201741 26201779 -2802877 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 784 738 22 0 0 chrUextra 26201779 26201870 -2802786 - NTS_DM Other Other -122 118 28 1 784 255 125 0 0 chrUextra 26202766 26202806 -2801850 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 784 22 56 0 0 chrUextra 26202819 26202855 -2801801 + AT_rich Low_complexity Low_complexity 1 36 0 1 784 870 9 0 27 chrUextra 26202881 26202993 -2801663 + NTS_DM Other Other 25 133 -107 1 784 1252 18 0 6 chrUextra 26202993 26203158 -2801498 + NTS_DM Other Other 38 201 -39 1 784 666 12 0 35 chrUextra 26203210 26203296 -2801360 + NTS_DM Other Other 25 107 -133 1 784 1265 33 0 6 chrUextra 26204109 26204291 -2800365 + FW_DM LINE Jockey 4512 4692 0 1 784 254 29 0 0 chrUextra 26204296 26204330 -2800326 - R1_DM LINE R1 -3966 1390 1357 1 784 2960 31 54 3 chrUextra 26204330 26204722 -2799934 - R1_DM LINE R1 -4150 1206 795 1 784 2022 144 63 22 chrUextra 26204851 26205431 -2799225 - STALKER4_I LTR Gypsy -5531 999 348 1 784 2281 98 2 31 chrUextra 26205535 26206145 -2798511 + DMSAT6 Satellite Satellite 1 591 -3 1 784 1980 183 7 9 chrUextra 26206248 26206690 -2797966 - SAR_DM Satellite Satellite -536 936 496 1 784 657 53 53 0 chrUextra 26206695 26206790 -2797866 + ARS406_DM Unknown Unknown 90 189 -164 1 784 766 136 39 13 chrUextra 26206705 26206861 -2797795 - SAR_DM Satellite Satellite -569 903 744 1 784 302 87 0 0 chrUextra 26206961 26207007 -2797649 - ARS406_DM Unknown Unknown -307 46 1 1 784 2640 177 15 8 chrUextra 26206967 26207570 -2797086 + SAR_DM Satellite Satellite 246 852 -620 1 784 1620 0 0 0 chrUextra 26207676 26208036 -2796620 + (GAGAA)n Simple_repeat Simple_repeat 1 360 0 1 784 2326 0 4 0 chrUextra 26209100 26209372 -2795284 - R1_DM LINE R1 -253 5103 4831 1 784 2995 0 0 3 chrUextra 26209368 26209713 -2794943 - LSU-rRNA_Dme rRNA rRNA -1246 2654 2311 1 784 5274 3 0 0 chrUextra 26209813 26210426 -2794230 - R1_DM LINE R1 -1655 3701 3089 1 784 3159 35 25 3 chrUextra 26210526 26211135 -2793521 + PROTOP DNA P 134 827 -3653 1 784 2828 146 10 36 chrUextra 26211241 26211852 -2792804 + SAR_DM Satellite Satellite 462 1056 -416 1 784 5136 13 2 0 chrUextra 26211954 26212565 -2792091 + DMRT1B LINE R1 1868 2479 -2704 1 784 5332 0 0 2 chrUextra 26212665 26213278 -2791378 + SSU-rRNA_Dme rRNA rRNA 556 1167 -828 1 784 474 153 24 0 chrUextra 26214173 26214258 -2790398 - NTS_DM Other Other -150 90 4 1 12 1301 6 0 18 chrUextra 26214368 26214533 -2790123 - NTS_DM Other Other -78 162 1 1 785 1203 6 23 18 chrUextra 26214533 26214704 -2789952 - NTS_DM Other Other 0 240 69 1 785 2641 172 10 11 chrUextra 26214805 26215416 -2789240 + SAR_DM Satellite Satellite 244 853 -619 1 785 2738 231 5 3 chrUextra 26215517 26216130 -2788526 - Gypsy_I LTR Gypsy -5346 1161 548 1 785 1599 6 0 0 chrUextra 26216243 26216423 -2788233 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 1 785 1447 18 0 33 chrUextra 26216437 26216842 -2787814 + (TAGA)n Simple_repeat Simple_repeat 1 391 0 1 785 611 0 0 0 chrUextra 26216943 26217015 -2787641 + DM176_LTR LTR Gypsy 436 507 0 1 785 4283 8 0 0 chrUextra 26217026 26217533 -2787123 + DM176_LTR LTR Gypsy 1 507 0 1 785 2610 184 13 13 chrUextra 26217656 26218266 -2786390 + SAR_DM Satellite Satellite 438 1047 -425 1 785 1937 181 11 5 chrUextra 26219082 26219690 -2784966 - SAR_DM Satellite Satellite -716 611 1 1 785 5075 7 10 0 chrUextra 26219795 26220408 -2784248 - DMRT1B LINE R1 -3612 1571 953 1 785 5103 0 2 2 chrUextra 26220512 26221121 -2783535 - LSU-rRNA_Dme rRNA rRNA -2826 1074 466 1 785 2775 173 8 10 chrUextra 26221221 26221834 -2782822 + SAR_DM Satellite Satellite 403 1014 -458 1 785 1626 43 0 0 chrUextra 26221936 26222144 -2782512 + DM1731_LTR LTR Copia 128 335 -1 1 785 1620 8 0 0 chrUextra 26222144 26222547 -2782109 + (TTATA)n Simple_repeat Simple_repeat 1 403 0 1 785 2983 107 64 35 chrUextra 26222647 26223260 -2781396 - STALKER4_I LTR Gypsy -5342 1188 430 1 785 523 33 0 0 chrUextra 26224503 26224564 -2780092 + DNAREP1_DM LINE Penelope 2 62 -532 1 785 5491 2 0 2 chrUextra 26224786 26225380 -2779276 - LSU-rRNA_Dme rRNA rRNA -1520 2380 1788 1 785 2991 169 10 8 chrUextra 26225499 26226101 -2778555 - SAR_DM Satellite Satellite -549 923 321 1 785 951 81 3 18 chrUextra 26226212 26226825 -2777831 + RSP Satellite Satellite 1 604 0 1 785 981 283 54 47 chrUextra 26226925 26227538 -2777118 - SAR_DM Satellite Satellite -485 987 371 1 785 23 0 0 0 chrUextra 26228437 26228460 -2776196 + AT_rich Low_complexity Low_complexity 1 23 0 1 785 5298 13 2 3 chrUextra 26229064 26229677 -2774979 - ROO_I LTR Pao -4394 3862 3251 1 785 5279 11 29 0 chrUextra 26229777 26230390 -2774266 - STALKER4_I LTR Gypsy -3275 3255 2625 1 785 4954 38 0 2 chrUextra 26230490 26231103 -2773553 - Gypsy2_I LTR Gypsy -1694 5318 4097 1 785 246 62 0 0 chrUextra 26231203 26231235 -2773421 + (GAAAA)n Simple_repeat Simple_repeat 4 35 0 1 785 5593 3 2 3 chrUextra 26231916 26232529 -2772127 + LSU-rRNA_Dme rRNA rRNA 861 1472 -2428 1 785 3083 171 11 8 chrUextra 26232629 26233242 -2771414 + SAR_DM Satellite Satellite 411 1025 -447 1 785 1223 0 0 0 chrUextra 26233342 26233472 -2771184 - LSU-rRNA_Dme rRNA rRNA -1983 1917 1788 1 785 3886 5 5 7 chrUextra 26233513 26233955 -2770701 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1351 1 785 3114 172 8 7 chrUextra 26234055 26234668 -2769988 + SAR_DM Satellite Satellite 256 869 -603 1 785 5443 7 11 3 chrUextra 26234768 26235381 -2769275 - Copia2_I LTR Copia -2849 1313 696 1 785 3081 174 8 8 chrUextra 26235482 26236089 -2768567 + SAR_DM Satellite Satellite 352 958 -514 1 785 774 91 0 0 chrUextra 26236194 26236315 -2768341 + (TAA)n Simple_repeat Simple_repeat 1 121 0 1 785 186 0 98 39 chrUextra 26236344 26236395 -2768261 + (TATAA)n Simple_repeat Simple_repeat 2 55 0 1 785 24 67 0 0 chrUextra 26236400 26236445 -2768211 + AT_rich Low_complexity Low_complexity 1 45 0 1 785 1239 82 0 0 chrUextra 26236499 26236796 -2767860 + (TAA)n Simple_repeat Simple_repeat 1 297 0 1 785 5301 31 3 0 chrUextra 26236907 26237520 -2767136 + IDEFIX_I LTR Gypsy 1314 1928 -3700 1 785 2814 64 13 26 chrUextra 26237620 26238232 -2766424 + DMSAT6 Satellite Satellite 1 604 -48 1 785 5558 5 0 0 chrUextra 26238333 26238946 -2765710 + DOC LINE Jockey 1272 1884 -2841 1 785 1760 183 19 5 chrUextra 26239046 26239659 -2764997 + SAR_DM Satellite Satellite 1 621 -558 1 785 2360 102 15 65 chrUextra 26239785 26240372 -2764284 + DMSAT6 Satellite Satellite 1 557 0 1 785 2457 104 48 20 chrUextra 26240472 26241083 -2763573 - DMSAT6 Satellite Satellite -43 628 1 1 785 3081 172 7 8 chrUextra 26241187 26241798 -2762858 - SAR_DM Satellite Satellite -435 1037 428 1 785 1871 0 18 18 chrUextra 26241898 26242127 -2762529 + NTS_DM Other Other 12 240 0 1 785 1992 4 17 13 chrUextra 26242127 26242366 -2762290 + NTS_DM Other Other 1 240 0 1 785 1303 7 0 0 chrUextra 26242366 26242511 -2762145 + NTS_DM Other Other 1 145 -95 1 785 5676 3 0 0 chrUextra 26242611 26243224 -2761432 - FW_DM LINE Jockey -749 3943 3331 1 785 724 157 148 14 chrUextra 26243330 26243472 -2761184 - DMLTR5 LTR Gypsy -62 204 44 1 785 323 274 120 64 chrUextra 26243679 26243929 -2760727 + Invader1_LTR LTR Gypsy 84 347 -76 1 785 990 0 0 0 chrUextra 26244037 26244147 -2760509 + (GAGAA)n Simple_repeat Simple_repeat 2 111 0 1 785 5592 0 2 5 chrUextra 26244750 26245363 -2759293 - SSU-rRNA_Dme rRNA rRNA -601 1394 784 1 785 1117 176 24 10 chrUextra 26245463 26246073 -2758583 + SAR_DM Satellite Satellite 1 618 -680 1 785 3584 5 7 10 chrUextra 26246266 26246681 -2757975 + DM297_LTR LTR Gypsy 1 414 0 1 785 919 19 9 0 chrUextra 26246681 26246789 -2757867 + DM297_I LTR Gypsy 1 109 -6058 1 785 5455 2 8 3 chrUextra 26246892 26247502 -2757154 + LSU-rRNA_Dme rRNA rRNA 1096 1708 -2192 1 785 1728 175 25 8 chrUextra 26247604 26248215 -2756441 + SAR_DM Satellite Satellite 1 621 -569 1 785 2605 164 8 29 chrUextra 26249037 26250335 -2754321 + DMSAT6 Satellite Satellite 1 1270 -3 1 785 530 41 0 14 chrUextra 26250454 26250528 -2754128 + (TTCTC)n Simple_repeat Simple_repeat 2 74 0 1 785 2401 194 11 11 chrUextra 26250528 26251066 -2753590 - SAR_DM Satellite Satellite -689 783 246 1 785 2914 185 8 8 chrUextra 26251167 26251773 -2752883 - SAR_DM Satellite Satellite -468 1004 399 1 785 5635 8 0 0 chrUextra 26251880 26252493 -2752163 + LSU-rRNA_Dme rRNA rRNA 2189 2801 -1099 1 785 2405 108 21 11 chrUextra 26252593 26253205 -2751451 - DMSAT6 Satellite Satellite -1 617 1 1 785 1048 69 7 19 chrUextra 26253336 26253917 -2750739 - RSP Satellite Satellite 0 574 1 1 785 2468 86 10 83 chrUextra 26254036 26254629 -2750027 + DMSAT6 Satellite Satellite 1 549 0 1 785 2405 102 20 36 chrUextra 26254729 26255341 -2749315 - DMSAT6 Satellite Satellite -408 602 1 1 785 5086 33 25 2 chrUextra 26255441 26256053 -2748603 - DMRT1B LINE R1 -2953 2230 1605 1 785 423 100 0 0 chrUextra 26256205 26256275 -2748381 + (TAA)n Simple_repeat Simple_repeat 3 72 0 1 785 3132 22 0 0 chrUextra 26256275 26256631 -2748025 + MDG1_LTR LTR Gypsy 87 442 0 1 785 1215 8 0 0 chrUextra 26256631 26256765 -2747891 + MDG1_I LTR Gypsy 1 134 -6462 1 785 5148 26 29 0 chrUextra 26256865 26257477 -2747179 - ROO_I LTR Pao -3787 4469 3840 1 785 2810 181 10 10 chrUextra 26257577 26258170 -2746486 + SAR_DM Satellite Satellite 484 1076 -396 1 785 537 301 58 58 chrUextra 26259001 26259534 -2745122 - BLASTOPIA_I LTR Gypsy -1868 2724 2178 1 785 2677 191 10 8 chrUextra 26259713 26260308 -2744348 - SAR_DM Satellite Satellite -685 787 192 1 785 733 115 0 0 chrUextra 26260212 26260325 -2744331 + ARS406_DM Unknown Unknown 1 113 -240 1 785 4758 30 31 3 chrUextra 26260425 26260998 -2743658 - R1_DM LINE R1 -2497 2859 2271 1 785 378 23 0 0 chrUextra 26260991 26261034 -2743622 + CIRCE LINE Composite 4931 4973 -1383 1 785 239 86 0 0 chrUextra 26261137 26261172 -2743484 + ARS406_DM Unknown Unknown 64 98 -255 1 785 2727 169 7 13 chrUextra 26261192 26261749 -2742907 - SAR_DM Satellite Satellite -396 1076 523 1 785 4070 42 99 0 chrUextra 26261914 26262457 -2742199 + PROTOP DNA P 1 597 -3883 1 785 1091 85 19 7 chrUextra 26262562 26262716 -2741940 + DM297_LTR LTR Gypsy 155 310 -104 1 785 28 0 0 0 chrUextra 26262817 26262845 -2741811 + AT_rich Low_complexity Low_complexity 1 28 0 1 785 975 110 0 0 chrUextra 26262847 26263166 -2741490 + (TTA)n Simple_repeat Simple_repeat 1 319 0 1 785 2730 190 7 20 chrUextra 26263273 26263885 -2740771 + SAR_DM Satellite Satellite 498 1101 -371 1 785 3558 84 137 13 chrUextra 26263985 26264597 -2740059 + Gypsy12_I LTR Gypsy 4580 5267 -279 1 785 5561 2 0 0 chrUextra 26264697 26265309 -2739347 - ROO_I LTR Pao -2854 5402 4791 1 785 5459 0 2 2 chrUextra 26265409 26266021 -2738635 - R1_DM LINE R1 -3950 1406 795 1 785 5719 0 0 2 chrUextra 26266121 26266733 -2737923 + SSU-rRNA_Dme rRNA rRNA 268 878 -1117 1 785 224 185 31 0 chrUextra 26266877 26266942 -2737714 + (TTA)n Simple_repeat Simple_repeat 2 68 0 1 785 22 35 0 0 chrUextra 26267229 26267258 -2737398 + AT_rich Low_complexity Low_complexity 1 29 0 1 785 237 246 0 14 chrUextra 26267555 26267629 -2737027 - Transib5 DNA Transib -1538 1463 1391 1 785 207 0 0 0 chrUextra 26267689 26267712 -2736944 + (TA)n Simple_repeat Simple_repeat 1 23 0 1 785 4825 44 18 2 chrUextra 26268257 26268868 -2735788 - R1_DM LINE R1 -4122 1234 614 1 785 3149 270 45 21 chrUextra 26268969 26270285 -2734371 + SAR_DM Satellite Satellite 1 1346 -217 1 785 5496 2 2 5 chrUextra 26270393 26271005 -2733651 + G2_DM LINE Jockey 1181 1790 -1312 1 785 5660 3 0 0 chrUextra 26271105 26271717 -2732939 - FW_DM LINE Jockey -855 3837 3226 1 785 4615 49 23 3 chrUextra 26272529 26273141 -2731515 - R1_DM LINE R1 -4302 1054 431 1 785 1236 7 0 0 chrUextra 26273276 26273411 -2731245 - 5S_DM RNA RNA 0 135 1 1 785 1236 7 0 0 chrUextra 26273649 26273784 -2730872 - 5S_DM RNA RNA 0 135 1 1 785 1149 363 10 10 chrUextra 26275377 26275983 -2728673 + GTWIN_I LTR Gypsy 3495 4100 -2321 1 785 2780 195 5 11 chrUextra 26276094 26276701 -2727955 - SAR_DM Satellite Satellite -668 804 202 1 785 5508 0 2 8 chrUextra 26276801 26277413 -2727243 - SSU-rRNA_Dme rRNA rRNA -54 1941 1334 1 785 5494 5 5 3 chrUextra 26277514 26278125 -2726531 - LSU-rRNA_Dme rRNA rRNA -2240 1660 1049 1 785 5180 20 2 0 chrUextra 26278225 26278837 -2725819 - MAX_I LTR Pao -3627 4287 3675 1 785 2394 183 15 28 chrUextra 26278940 26279548 -2725108 - SAR_DM Satellite Satellite -359 1113 514 1 785 5108 0 2 2 chrUextra 26279649 26280261 -2724395 - R1_DM LINE R1 -4129 1227 616 1 785 1823 179 1 13 chrUextra 26280363 26280776 -2723880 - STALKER4_I LTR Gypsy -6705 697 235 1 785 25 0 0 0 chrUextra 26280800 26280825 -2723831 + AT_rich Low_complexity Low_complexity 1 25 0 1 785 244 128 0 21 chrUextra 26281514 26281562 -2723094 - HMSBEAGLE_I LTR Gypsy -6308 221 175 1 785 351 49 65 16 chrUextra 26281583 26281645 -2723011 - HMSBEAGLE_I LTR Gypsy -6464 65 1 1 785 2792 168 7 8 chrUextra 26281804 26282397 -2722259 - SAR_DM Satellite Satellite -447 1025 434 1 785 2841 173 7 5 chrUextra 26282500 26283109 -2721547 - SAR_DM Satellite Satellite -581 891 282 1 785 748 0 11 0 chrUextra 26283921 26284010 -2720646 - Invader4_LTR LTR Gypsy -256 90 1 1 785 2905 16 24 3 chrUextra 26284010 26284274 -2720382 - Invader4_I LTR Gypsy 0 2413 2150 1 785 180 0 0 0 chrUextra 26284274 26284294 -2720362 + (C)n Simple_repeat Simple_repeat 1 20 0 1 785 2905 4 4 0 chrUextra 26284294 26284531 -2720125 - Invader4_I LTR Gypsy -264 2149 1777 1 785 4727 3 5 3 chrUextra 26284633 26285242 -2719414 + TABOR_I LTR Gypsy 5534 6143 -193 1 785 2378 97 15 25 chrUextra 26285345 26285940 -2718716 + DMSAT6 Satellite Satellite 1 588 -51 1 785 2413 78 22 44 chrUextra 26286079 26286667 -2717989 + DMSAT6 Satellite Satellite 1 575 -3 1 785 2547 174 12 10 chrUextra 26286789 26287381 -2717275 + SAR_DM Satellite Satellite 326 918 -554 1 785 1345 21 20 25 chrUextra 26287481 26287679 -2716977 - NTS_DM Other Other -6 234 38 1 785 817 0 0 0 chrUextra 26287679 26287775 -2716881 - NTS_DM Other Other -107 133 38 1 785 832 9 9 27 chrUextra 26287775 26287886 -2716770 - NTS_DM Other Other -107 133 25 1 785 21 57 0 0 chrUextra 26287912 26287947 -2716709 + AT_rich Low_complexity Low_complexity 1 35 0 1 785 1042 21 0 7 chrUextra 26287947 26288093 -2716563 - NTS_DM Other Other -39 201 57 1 785 5096 0 10 2 chrUextra 26288193 26288805 -2715851 - ROO_I LTR Pao -4638 3618 3002 1 785 976 0 0 0 chrUextra 26288905 26289018 -2715638 - HMSBEAGLE_I LTR Gypsy -5448 1081 969 1 785 953 35 52 12 chrUextra 26289018 26289190 -2715466 + (TAA)n Simple_repeat Simple_repeat 1 179 0 1 785 2504 0 0 3 chrUextra 26289190 26289516 -2715140 - HMSBEAGLE_I LTR Gypsy -5733 796 472 1 785 4792 23 0 0 chrUextra 26289617 26290229 -2714427 - QUASIMODO_I LTR Gypsy -1159 4901 4290 1 785 2737 162 13 18 chrUextra 26290330 26290940 -2713716 + SAR_DM Satellite Satellite 400 1006 -466 1 785 21 36 0 0 chrUextra 26291625 26291653 -2713003 + AT_rich Low_complexity Low_complexity 1 28 0 1 785 2621 173 21 13 chrUextra 26291756 26292365 -2712291 + SAR_DM Satellite Satellite 246 859 -613 1 785 1251 188 46 6 chrUextra 26292469 26293077 -2711579 - SAR_DM Satellite Satellite -824 632 1 1 785 2339 90 23 35 chrUextra 26293185 26293789 -2710867 + DMSAT6 Satellite Satellite 1 596 -13 1 785 825 11 0 0 chrUextra 26295119 26295213 -2709443 + (TTCTC)n Simple_repeat Simple_repeat 2 95 0 1 785 3279 0 0 0 chrUextra 26295313 26295692 -2708964 - R1_DM LINE R1 -57 5299 4921 1 785 1987 4 0 0 chrUextra 26295695 26295925 -2708731 - R1_DM LINE R1 0 5356 5127 1 785 2707 156 21 18 chrUextra 26296025 26296637 -2708019 - SAR_DM Satellite Satellite -485 987 374 1 785 4999 23 2 3 chrUextra 26296737 26297349 -2707307 - Gypsy6_I LTR Gypsy -4990 2022 1412 1 785 517 119 154 70 chrUextra 26297449 26297635 -2707021 + DM176_LTR LTR Gypsy 230 480 -27 1 785 3229 29 0 19 chrUextra 26297635 26298061 -2706595 + DM176_I LTR Gypsy 1 418 -6002 1 785 789 63 0 0 chrUextra 26298165 26298276 -2706380 + ARS406_DM Unknown Unknown 79 189 -164 1 785 2801 278 91 23 chrUextra 26298179 26299482 -2705174 - SAR_DM Satellite Satellite -208 1391 1 1 785 4436 37 16 16 chrUextra 26299584 26300195 -2704461 + R1_DM LINE R1 547 1157 -4199 1 785 5149 13 2 0 chrUextra 26300295 26300906 -2703750 - STALKER4_I LTR Gypsy -2236 4294 3683 1 785 2888 167 7 7 chrUextra 26301008 26301616 -2703040 + SAR_DM Satellite Satellite 251 858 -614 1 785 5080 15 0 0 chrUextra 26301717 26302328 -2702328 - G2_DM LINE Jockey -251 2851 2241 1 785 976 92 10 19 chrUextra 26302436 26303019 -2701637 + RSP Satellite Satellite 1 578 0 1 785 4953 20 3 2 chrUextra 26303139 26303750 -2700906 - R1_DM LINE R1 -1500 3856 3245 1 785 2716 163 10 10 chrUextra 26303856 26304444 -2700212 - SAR_DM Satellite Satellite -514 958 371 1 785 231 81 27 0 chrUextra 26304561 26304598 -2700058 + ARS406_DM Unknown Unknown 152 189 -164 1 785 2802 169 8 7 chrUextra 26304566 26305167 -2699489 - SAR_DM Satellite Satellite -625 847 246 1 785 225 156 0 0 chrUextra 26305127 26305172 -2699484 + ARS406_DM Unknown Unknown 1 45 -308 1 785 1404 41 0 4 chrUextra 26305279 26305511 -2699145 + (CAAGA)n Simple_repeat Simple_repeat 1 231 0 1 785 1050 100 0 0 chrUextra 26305511 26305691 -2698965 + (ACTAG)n Simple_repeat Simple_repeat 1 180 0 1 785 1008 100 0 1 chrUextra 26305691 26305877 -2698779 + (CAAGA)n Simple_repeat Simple_repeat 1 185 0 1 785 1463 6 0 0 chrUextra 26305983 26306164 -2698492 - QUASIMODO_LTR LTR Gypsy -476 182 2 1 785 212 0 36 0 chrUextra 26306164 26306192 -2698464 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 785 28 48 0 0 chrUextra 26306411 26306453 -2698203 + AT_rich Low_complexity Low_complexity 1 42 0 1 785 1485 25 111 0 chrUextra 26306694 26306744 -2697912 + Stalker3_LTR LTR Gypsy 152 201 -171 1 785 207 0 0 0 chrUextra 26306744 26306767 -2697889 + (ATAAG)n Simple_repeat Simple_repeat 2 24 0 1 785 1485 25 111 0 chrUextra 26306767 26306915 -2697741 + Stalker3_LTR LTR Gypsy 202 370 -2 1 785 3178 31 0 0 chrUextra 26306915 26307305 -2697351 - R1_DM LINE R1 -523 4833 4444 1 785 513 16 0 0 chrUextra 26307405 26307466 -2697190 - NTS_DM Other Other -179 61 1 1 785 1861 0 17 13 chrUextra 26307466 26307705 -2696951 - NTS_DM Other Other 0 240 1 1 785 1861 0 17 13 chrUextra 26307705 26307944 -2696712 - NTS_DM Other Other 0 240 1 1 785 460 0 56 42 chrUextra 26307944 26308016 -2696640 - NTS_DM Other Other 0 240 168 1 785 37 39 0 0 chrUextra 26308346 26308397 -2696259 + AT_rich Low_complexity Low_complexity 1 51 0 1 785 22 35 0 0 chrUextra 26308498 26308527 -2696129 + AT_rich Low_complexity Low_complexity 1 29 0 1 785 320 321 7 7 chrUextra 26308851 26308992 -2695664 + Invader2_I LTR Gypsy 2624 2749 -1843 1 785 291 306 19 19 chrUextra 26309278 26309438 -2695218 + MDG3_I LTR Gypsy 3263 3422 -1564 1 785 2384 195 21 7 chrUextra 26309539 26310149 -2694507 + SAR_DM Satellite Satellite 205 823 -649 1 785 4766 0 2 4 chrUextra 26310249 26310802 -2693854 + LSU-rRNA_Dme rRNA rRNA 3349 3900 0 1 785 221 85 98 33 chrUextra 26310963 26311024 -2693632 + (CTCTG)n Simple_repeat Simple_repeat 1 65 0 1 785 577 103 78 10 chrUextra 26311035 26311543 -2693113 + GA-rich Low_complexity Low_complexity 1 542 0 1 785 917 0 0 0 chrUextra 26311671 26311776 -2692880 - SSU-rRNA_Dme rRNA rRNA -1890 105 1 1 785 32 0 0 0 chrUextra 26311908 26311940 -2692716 + AT_rich Low_complexity Low_complexity 1 32 0 1 785 4966 16 3 0 chrUextra 26312385 26312993 -2691663 + BLOOD_I LTR Gypsy 2006 2615 -3998 1 785 4491 64 0 0 chrUextra 26313093 26313704 -2690952 - STALKER4_I LTR Gypsy -670 5860 5250 1 785 1207 50 56 0 chrUextra 26314515 26314694 -2689962 + PROTOP DNA P 3046 3234 -1246 1 785 5110 0 0 3 chrUextra 26315226 26315837 -2688819 + LSU-rRNA_Dme rRNA rRNA 461 1069 -2831 1 785 2811 172 8 10 chrUextra 26315937 26316548 -2688108 + SAR_DM Satellite Satellite 408 1017 -455 1 785 4126 22 4 45 chrUextra 26316648 26317207 -2687449 - LSU-rRNA_Dme rRNA rRNA -3363 537 2 1 785 25 51 0 0 chrUextra 26317220 26317259 -2687397 + AT_rich Low_complexity Low_complexity 1 39 0 1 785 2660 179 12 7 chrUextra 26317367 26317970 -2686686 - SAR_DM Satellite Satellite -593 879 274 1 785 2925 233 26 38 chrUextra 26318079 26319392 -2685264 + SAR_DM Satellite Satellite 1 1298 -208 1 785 996 8 8 0 chrUextra 26319492 26319617 -2685039 - Copia_LTR LTR Copia -150 126 1 1 785 3867 20 0 0 chrUextra 26319617 26320103 -2684553 - IDEFIX_I LTR Gypsy -2244 3384 2899 1 785 1493 17 0 6 chrUextra 26320203 26320384 -2684272 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 1 785 1580 0 0 8 chrUextra 26320405 26320801 -2683855 + (TAGA)n Simple_repeat Simple_repeat 1 392 0 1 785 1917 105 60 60 chrUextra 26320915 26321299 -2683357 - Gypsy6_LTR LTR Gypsy -23 384 1 1 785 1455 137 0 0 chrUextra 26321299 26321525 -2683131 - Gypsy3_I LTR Gypsy 0 6177 5952 1 785 2236 187 34 10 chrUextra 26321625 26322220 -2682436 - SAR_DM Satellite Satellite -684 788 180 1 785 830 74 0 0 chrUextra 26322114 26322236 -2682420 + ARS406_DM Unknown Unknown 1 122 -231 1 785 5079 8 3 2 chrUextra 26322336 26322947 -2681709 + R1_DM LINE R1 3363 3974 -1382 1 785 5139 12 0 5 chrUextra 26323047 26323658 -2680998 + QUASIMODO_I LTR Gypsy 254 861 -5199 1 785 1620 0 0 0 chrUextra 26324469 26324765 -2679891 + (CATCT)n Simple_repeat Simple_repeat 1 296 0 1 785 1620 22 0 0 chrUextra 26324765 26325080 -2679576 + (CATGT)n Simple_repeat Simple_repeat 1 315 0 1 785 5152 3 3 3 chrUextra 26325180 26325791 -2678865 + LSU-rRNA_Dme rRNA rRNA 785 1395 -2505 1 785 29 60 0 0 chrUextra 26325989 26326039 -2678617 + AT_rich Low_complexity Low_complexity 1 50 0 1 785 23 68 0 0 chrUextra 26326085 26326129 -2678527 + AT_rich Low_complexity Low_complexity 1 44 0 1 785 21 89 0 0 chrUextra 26326167 26326223 -2678433 + AT_rich Low_complexity Low_complexity 1 56 0 1 785 4574 39 56 2 chrUextra 26326602 26327213 -2677443 - R1_DM LINE R1 -1911 3445 2802 1 785 884 46 0 8 chrUextra 26327313 26327444 -2677212 + NTS_DM Other Other 72 201 -39 1 785 853 18 0 27 chrUextra 26327496 26327608 -2677048 + NTS_DM Other Other 25 133 -107 1 785 1252 18 0 6 chrUextra 26327608 26327773 -2676883 + NTS_DM Other Other 38 201 -39 1 785 21 57 0 0 chrUextra 26327773 26327808 -2676848 + AT_rich Low_complexity Low_complexity 1 35 0 1 785 667 11 11 33 chrUextra 26327834 26327924 -2676732 + NTS_DM Other Other 25 112 -128 1 785 2439 90 19 19 chrUextra 26328042 26328633 -2676023 - DMSAT6 Satellite Satellite 0 591 1 1 785 1620 0 0 0 chrUextra 26328735 26328947 -2675709 + (GAGAA)n Simple_repeat Simple_repeat 1 212 0 1 785 2797 161 11 11 chrUextra 26329446 26330055 -2674601 - SAR_DM Satellite Satellite -439 1033 425 1 785 378 0 0 0 chrUextra 26330725 26330768 -2673888 - SSU-rRNA_Dme rRNA rRNA 0 1995 1953 1 785 4956 20 0 3 chrUextra 26331579 26332190 -2672466 - G_DM LINE Jockey -1397 2949 2341 1 785 3980 6 0 51 chrUextra 26332292 26332808 -2671848 + DM176_I LTR Gypsy 29 536 -5884 1 785 208 28 26 53 chrUextra 26332808 26332846 -2671810 + (TAA)n Simple_repeat Simple_repeat 3 39 0 1 785 3980 6 0 51 chrUextra 26332846 26332901 -2671755 + DM176_I LTR Gypsy 537 571 -5849 1 785 3597 0 7 5 chrUextra 26333001 26333427 -2671229 + SSU-rRNA_Dme rRNA rRNA 1569 1995 0 1 785 21 89 0 0 chrUextra 26333446 26333502 -2671154 + AT_rich Low_complexity Low_complexity 1 56 0 1 785 2412 179 34 10 chrUextra 26333713 26334323 -2670333 + SAR_DM Satellite Satellite 278 902 -570 1 785 373 292 44 24 chrUextra 26334423 26334718 -2669938 - XDMR_DM Unknown Unknown -52 308 8 1 785 793 270 61 52 chrUextra 26334480 26335034 -2669622 + SAR_DM Satellite Satellite 435 993 -479 1 785 2339 112 13 28 chrUextra 26335135 26335736 -2668920 + DMSAT6 Satellite Satellite 1 591 -85 1 785 5227 2 0 2 chrUextra 26335845 26336456 -2668200 - R1_DM LINE R1 -3135 2221 1612 1 785 2164 187 69 24 chrUextra 26336556 26337167 -2667489 + SAR_DM Satellite Satellite 1 638 -216 1 785 5023 2 2 3 chrUextra 26337267 26337878 -2666778 - R1_DM LINE R1 -4158 1198 589 1 785 842 69 9 0 chrUextra 26338026 26338142 -2666514 - MAX_I LTR Pao -7241 673 557 1 785 390 152 91 71 chrUextra 26338388 26338586 -2666070 - MAX_I LTR Pao -7390 524 323 1 785 1748 19 5 0 chrUextra 26338689 26338901 -2665755 - MDG1_LTR LTR Gypsy -143 299 87 1 785 423 100 0 0 chrUextra 26338901 26338971 -2665685 + (TTA)n Simple_repeat Simple_repeat 3 72 0 1 785 1595 9 371 0 chrUextra 26338975 26339300 -2665356 - MDG1_I LTR Gypsy -98 6799 6164 1 785 1202 33 21 27 chrUextra 26339400 26339587 -2665069 + NTS_DM Other Other 55 240 0 1 785 1850 4 17 13 chrUextra 26339587 26339826 -2664830 + NTS_DM Other Other 1 240 0 1 785 1524 11 0 0 chrUextra 26339826 26340011 -2664645 + NTS_DM Other Other 1 185 -55 1 785 5107 23 0 0 chrUextra 26340111 26340722 -2663934 - MAX_I LTR Pao -1979 5935 5325 1 785 921 72 8 18 chrUextra 26340822 26341433 -2663223 - RSP Satellite Satellite -83 605 1 1 785 509 175 25 0 chrUextra 26342244 26342364 -2662292 - ARS406_DM Unknown Unknown -230 123 1 1 785 2282 180 27 24 chrUextra 26342262 26342855 -2661801 + SAR_DM Satellite Satellite 185 779 -693 1 785 5259 3 0 0 chrUextra 26342955 26343566 -2661090 + R1_DM LINE R1 2947 3557 -1799 1 785 202 265 0 0 chrUextra 26343671 26343720 -2660936 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 785 719 60 8 17 chrUextra 26344867 26344986 -2659670 + DMSAT6 Satellite Satellite 271 388 -82 1 98 3292 45 45 35 chrUextra 26345087 26345572 -2659084 + PROTOP_A DNA P 616 1105 0 1 786 2504 82 15 53 chrUextra 26345797 26346407 -2658249 - DMSAT6 Satellite Satellite -136 586 1 1 786 1620 0 0 0 chrUextra 26346510 26346797 -2657859 + (TCTTG)n Simple_repeat Simple_repeat 1 287 0 1 786 2133 44 3 64 chrUextra 26348021 26348335 -2656321 + MAX_I LTR Pao 1 295 -7619 1 786 1656 15 5 5 chrUextra 26348335 26348537 -2656119 + Gypsy_LTR LTR Gypsy 1 202 -280 1 786 5230 2 3 2 chrUextra 26349348 26349957 -2654699 + SSU-rRNA_Dme rRNA rRNA 1168 1777 -218 1 786 3435 124 24 29 chrUextra 26350057 26350646 -2654010 + TART LINE telomeric 4793 5378 -9099 1 786 2750 178 8 5 chrUextra 26350770 26351374 -2653282 - SAR_DM Satellite Satellite -620 852 247 1 786 1410 266 38 42 chrUextra 26351483 26352083 -2652573 + ROVER-I_DM LTR Gypsy 1434 2031 -4553 1 786 2490 185 7 10 chrUextra 26352197 26352780 -2651876 + SAR_DM Satellite Satellite 496 1076 -396 1 786 1491 38 0 6 chrUextra 26352897 26353257 -2651399 + (TAA)n Simple_repeat Simple_repeat 1 357 0 1 786 231 128 35 82 chrUextra 26353284 26353369 -2651287 + (TATAA)n Simple_repeat Simple_repeat 2 82 0 1 786 1293 55 6 0 chrUextra 26353607 26353788 -2650868 - ARS406_DM Unknown Unknown -171 182 1 1 786 1460 189 11 8 chrUextra 26353788 26354217 -2650439 + SAR_DM Satellite Satellite 1 612 -719 1 786 5134 0 0 2 chrUextra 26354317 26354927 -2649729 - LSU-rRNA_Dme rRNA rRNA -3066 834 226 1 786 4571 43 8 0 chrUextra 26355027 26355637 -2649019 - MDG1_I LTR Gypsy -4851 1745 1131 1 786 22 56 0 0 chrUextra 26355906 26355942 -2648714 + AT_rich Low_complexity Low_complexity 1 36 0 1 786 2762 161 15 10 chrUextra 26356447 26357056 -2647600 - SAR_DM Satellite Satellite -487 985 374 1 786 1856 196 47 24 chrUextra 26357157 26357767 -2646889 + SAR_DM Satellite Satellite 1 623 -354 1 786 4450 60 2 10 chrUextra 26357867 26358476 -2646180 - BATUMI_I LTR Pao -4032 3931 3328 1 786 2693 18 3 17 chrUextra 26358579 26358924 -2645732 + BATUMI_I LTR Pao 6662 7001 -962 1 786 843 306 3 3 chrUextra 26358762 26359051 -2645605 - MAX_I LTR Pao -1063 6851 6563 1 786 1230 7 0 0 chrUextra 26359042 26359186 -2645470 - BATUMI_I LTR Pao -2917 5046 4903 1 786 2855 164 8 7 chrUextra 26359288 26359896 -2644760 - SAR_DM Satellite Satellite -577 895 287 1 786 358 23 0 0 chrUextra 26359997 26360040 -2644616 - NTS_DM Other Other -197 43 1 1 786 1754 38 4 4 chrUextra 26360040 26360280 -2644376 - NTS_DM Other Other 0 240 1 1 786 1734 21 17 17 chrUextra 26360280 26360520 -2644136 - NTS_DM Other Other 0 240 1 1 786 517 0 51 38 chrUextra 26360520 26360599 -2644057 - NTS_DM Other Other 0 240 161 1 786 2739 165 15 15 chrUextra 26360713 26361317 -2643339 + SAR_DM Satellite Satellite 399 1002 -470 1 786 1158 141 0 7 chrUextra 26361417 26362024 -2642632 + (TA)n Simple_repeat Simple_repeat 1 602 0 1 786 2241 99 18 22 chrUextra 26362135 26362736 -2641920 - DMSAT6 Satellite Satellite -64 599 1 1 786 4859 44 0 2 chrUextra 26362837 26363447 -2641209 + TC1_DM DNA Tc1 779 1387 -279 1 786 662 67 0 0 chrUextra 26363547 26363651 -2641005 + DOC5_DM LINE Jockey 4162 4265 -417 1 786 3160 38 13 28 chrUextra 26363650 26364112 -2640544 + DOC5_DM LINE Jockey 4228 4682 0 1 786 2376 99 25 25 chrUextra 26364258 26364867 -2639789 + DMSAT6 Satellite Satellite 1 609 -63 1 786 4610 39 0 3 chrUextra 26364967 26365577 -2639079 + R1_DM LINE R1 499 1106 -4250 1 786 1067 23 0 0 chrUextra 26366387 26366519 -2638137 - R1_DM LINE R1 -3461 1895 1764 1 786 1705 169 43 68 chrUextra 26366514 26366997 -2637659 - R1_DM LINE R1 -3640 1716 1246 1 786 2329 98 2 56 chrUextra 26367097 26367706 -2636950 + DMSAT6 Satellite Satellite 1 575 -138 1 786 5131 7 0 5 chrUextra 26367807 26368417 -2636239 - Gypsy4_I LTR Gypsy -4454 1834 1228 1 786 2456 198 7 14 chrUextra 26368517 26369127 -2635529 + SAR_DM Satellite Satellite 1 605 -405 1 786 4688 26 41 3 chrUextra 26369227 26369837 -2634819 - NINJA_I LTR Pao -212 5799 5167 1 786 5105 2 7 3 chrUextra 26369937 26370547 -2634109 - LSU-rRNA_Dme rRNA rRNA -2153 1747 1136 1 786 1620 33 0 3 chrUextra 26370647 26371254 -2633402 + (CACAA)n Simple_repeat Simple_repeat 1 605 0 1 786 2748 171 16 8 chrUextra 26371357 26371965 -2632691 - SAR_DM Satellite Satellite -435 1037 425 1 786 5275 3 2 0 chrUextra 26372067 26372673 -2631983 + SSU-rRNA_Dme rRNA rRNA 8 614 -1381 1 786 4631 7 3 3 chrUextra 26372777 26373371 -2631285 + MAX_I LTR Pao 276 869 -7045 1 786 5019 26 2 0 chrUextra 26373487 26374097 -2630559 + R1_DM LINE R1 4364 4974 -382 1 786 2705 168 14 7 chrUextra 26374213 26374807 -2629849 + SAR_DM Satellite Satellite 326 923 -549 1 786 5243 2 0 3 chrUextra 26374907 26375517 -2629139 + LSU-rRNA_Dme rRNA rRNA 1972 2579 -1321 1 786 3364 35 2 21 chrUextra 26375752 26376227 -2628429 + STALKER4_I LTR Gypsy 831 1499 -5031 1 786 2418 189 19 5 chrUextra 26376327 26376912 -2627744 - SAR_DM Satellite Satellite -685 787 195 1 786 603 100 73 0 chrUextra 26376827 26376937 -2627719 + ARS406_DM Unknown Unknown 1 118 -235 1 786 21 89 0 0 chrUextra 26377052 26377108 -2627548 + AT_rich Low_complexity Low_complexity 1 56 0 1 786 2615 181 11 7 chrUextra 26377747 26378357 -2626299 + SAR_DM Satellite Satellite 257 869 -603 1 786 5116 13 0 0 chrUextra 26378457 26379067 -2625589 - ROO_I LTR Pao -2665 5591 4982 1 786 5138 3 2 2 chrUextra 26379167 26379777 -2624879 - R1_DM LINE R1 -2046 3310 2701 1 786 465 131 36 0 chrUextra 26380183 26380267 -2624389 - NTS_DM Other Other -150 90 4 1 786 771 9 0 27 chrUextra 26380377 26380487 -2624169 - NTS_DM Other Other -78 162 56 1 786 2950 35 47 5 chrUextra 26380587 26380988 -2623668 + PROTOP DNA P 6 423 -4057 1 786 1412 48 19 5 chrUextra 26380988 26381197 -2623459 + PROTOP DNA P 208 419 -4061 1 786 680 24 0 0 chrUextra 26381298 26381381 -2623275 - STALKER4_LTR LTR Gypsy -319 83 1 1 786 4065 2 6 4 chrUextra 26381381 26381907 -2622749 - STALKER4_I LTR Gypsy 0 6530 6004 1 786 213 227 0 0 chrUextra 26382128 26382172 -2622484 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 786 4901 30 5 2 chrUextra 26382717 26383327 -2621329 - DOC3_DM LINE Jockey -1817 2923 2312 1 786 5274 0 2 0 chrUextra 26383427 26384037 -2620619 - R1_DM LINE R1 -3290 2066 1456 1 786 2682 169 35 7 chrUextra 26384137 26384744 -2619912 + SAR_DM Satellite Satellite 256 879 -593 1 786 1620 0 0 0 chrUextra 26384847 26385229 -2619427 + (GAGAA)n Simple_repeat Simple_repeat 1 382 0 1 786 2515 187 3 7 chrUextra 26385557 26386139 -2618517 - SAR_DM Satellite Satellite -397 1075 496 1 786 5220 3 2 0 chrUextra 26386267 26386877 -2617779 - R1_DM LINE R1 -251 5105 4495 1 786 5254 0 2 2 chrUextra 26386984 26387587 -2617069 + LSU-rRNA_Dme rRNA rRNA 2980 3582 -318 1 786 666 12 0 35 chrUextra 26387695 26387781 -2616875 - NTS_DM Other Other -133 107 25 1 786 22 56 0 0 chrUextra 26387807 26387843 -2616813 + AT_rich Low_complexity Low_complexity 1 36 0 1 786 225 125 0 24 chrUextra 26387856 26387897 -2616759 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 786 246 150 0 0 chrUextra 26387940 26387980 -2616676 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 786 246 150 0 0 chrUextra 26388032 26388072 -2616584 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 786 22 56 0 0 chrUextra 26388077 26388113 -2616543 + AT_rich Low_complexity Low_complexity 1 36 0 1 786 948 0 0 9 chrUextra 26388185 26388297 -2616359 - LSU-rRNA_Dme rRNA rRNA 0 3900 3790 1 786 1494 187 3 3 chrUextra 26388398 26388730 -2615926 - SAR_DM Satellite Satellite -645 827 496 1 786 1291 161 4 8 chrUextra 26388745 26389007 -2615649 - SAR_DM Satellite Satellite -569 903 643 1 786 1039 269 46 41 chrUextra 26389111 26389717 -2614939 + SAR_DM Satellite Satellite 294 902 -570 1 786 2213 5 3 8 chrUextra 26389817 26390426 -2614230 - HETRP_DM Satellite Satellite -1280 606 1 1 786 4907 23 3 3 chrUextra 26390527 26391137 -2613519 + R1_DM LINE R1 4663 5272 -84 1 786 2786 154 32 10 chrUextra 26391245 26391847 -2612809 + SAR_DM Satellite Satellite 371 985 -487 1 786 4862 36 0 0 chrUextra 26391947 26392557 -2612099 - R1_DM LINE R1 -2216 3140 2531 1 786 914 9 0 0 chrUextra 26392657 26392767 -2611889 - ROO_I LTR Pao -939 7317 7208 1 786 4320 0 0 0 chrUextra 26392757 26393267 -2611389 - ROO_I LTR Pao -1183 7073 6564 1 786 1158 122 0 0 chrUextra 26393368 26393623 -2611033 + (TA)n Simple_repeat Simple_repeat 1 255 0 1 786 2262 15 0 0 chrUextra 26393623 26393889 -2610767 - DMLTR5 LTR Gypsy 0 266 1 1 786 681 11 0 11 chrUextra 26393889 26393977 -2610679 - HMSBEAGLE_I LTR Gypsy 0 6529 6443 1 786 2260 108 25 17 chrUextra 26394080 26394682 -2609974 + DMSAT6 Satellite Satellite 1 606 -108 1 786 5109 0 2 0 chrUextra 26394787 26395397 -2609259 - ROO_I LTR Pao -4578 3678 3068 1 786 2391 194 7 7 chrUextra 26395497 26396077 -2608579 + SAR_DM Satellite Satellite 497 1076 -396 1 786 1620 0 0 0 chrUextra 26396215 26396395 -2608261 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 786 2195 99 10 49 chrUextra 26396915 26397524 -2607132 - DMSAT6 Satellite Satellite -39 584 1 1 786 927 0 0 0 chrUextra 26397624 26397727 -2606929 + (GAGAA)n Simple_repeat Simple_repeat 2 104 0 1 786 3105 43 43 166 chrUextra 26398333 26398942 -2605714 + CIRCE LINE Composite 983 1516 -4840 1 786 590 0 0 0 chrUextra 26399042 26399109 -2605547 - NTS_DM Other Other -173 67 1 1 786 1861 0 17 13 chrUextra 26399109 26399348 -2605308 - NTS_DM Other Other 0 240 1 1 786 1806 13 17 13 chrUextra 26399348 26399587 -2605069 - NTS_DM Other Other 0 240 1 1 786 399 0 62 47 chrUextra 26399587 26399651 -2605005 - NTS_DM Other Other 0 240 176 1 786 5000 15 2 0 chrUextra 26399752 26400360 -2604296 + STALKER4_I LTR Gypsy 5233 5841 -689 1 786 2471 257 42 34 chrUextra 26400460 26401778 -2602878 + SAR_DM Satellite Satellite 1 1328 -227 1 786 3161 274 21 37 chrUextra 26401894 26403196 -2601460 - SAR_DM Satellite Satellite -398 1281 1 1 786 2512 180 7 23 chrUextra 26403298 26403901 -2600755 + SAR_DM Satellite Satellite 507 1099 -373 1 786 28 71 0 0 chrUextra 26404023 26404079 -2600577 + AT_rich Low_complexity Low_complexity 1 56 0 1 786 23 68 0 0 chrUextra 26404125 26404169 -2600487 + AT_rich Low_complexity Low_complexity 1 44 0 1 786 21 89 0 0 chrUextra 26404207 26404263 -2600393 + AT_rich Low_complexity Low_complexity 1 56 0 1 786 903 76 6 21 chrUextra 26404714 26405318 -2599338 - RSP Satellite Satellite -35 595 1 1 786 598 200 7 14 chrUextra 26405458 26405600 -2599056 - HETRP_DM Satellite Satellite -203 1669 1529 1 786 584 214 7 14 chrUextra 26405742 26405884 -2598772 - HETRP_DM Satellite Satellite -203 1669 1529 1 786 2654 4 141 0 chrUextra 26406179 26406741 -2597915 - FW_DM LINE Jockey -2 4690 4050 1 786 427 31 0 15 chrUextra 26406847 26406913 -2597743 + NTS_DM Other Other 137 201 -39 1 786 870 9 0 27 chrUextra 26406965 26407077 -2597579 + NTS_DM Other Other 25 133 -107 1 786 1252 18 0 6 chrUextra 26407077 26407242 -2597414 + NTS_DM Other Other 38 201 -39 1 786 21 57 0 0 chrUextra 26407242 26407277 -2597379 + AT_rich Low_complexity Low_complexity 1 35 0 1 786 832 9 9 27 chrUextra 26407303 26407414 -2597242 + NTS_DM Other Other 25 133 -107 1 786 293 28 0 0 chrUextra 26407414 26407450 -2597206 + NTS_DM Other Other 38 73 -167 1 786 2758 173 8 10 chrUextra 26407550 26408158 -2596498 - SAR_DM Satellite Satellite -441 1031 425 1 786 2607 185 20 10 chrUextra 26408968 26409575 -2595081 + SAR_DM Satellite Satellite 425 1037 -435 1 786 4107 60 44 10 chrUextra 26409677 26410286 -2594370 - MDG1_I LTR Gypsy -5588 1008 379 1 786 373 40 20 0 chrUextra 26410386 26410436 -2594220 + ARS406_DM Unknown Unknown 139 189 -164 1 786 2528 192 28 5 chrUextra 26410393 26410991 -2593665 - SAR_DM Satellite Satellite -615 857 246 1 786 2083 117 8 41 chrUextra 26411120 26411704 -2592952 - DMSAT6 Satellite Satellite -3 564 1 1 786 1656 18 17 21 chrUextra 26411804 26412037 -2592619 - NTS_DM Other Other -8 232 1 1 786 1408 20 20 20 chrUextra 26412037 26412240 -2592416 - NTS_DM Other Other 0 240 38 1 786 817 0 0 0 chrUextra 26412240 26412336 -2592320 - NTS_DM Other Other -107 133 38 1 786 570 13 13 0 chrUextra 26412336 26412413 -2592243 - NTS_DM Other Other -107 133 56 1 786 4232 50 44 15 chrUextra 26412513 26413122 -2591534 - R1_DM LINE R1 -4422 934 308 1 786 319 299 16 16 chrUextra 26415419 26415548 -2589108 - DIVER2_I LTR Pao -1779 2368 2240 1 786 431 299 60 14 chrUextra 26415675 26415892 -2588764 - DIVER2_I LTR Pao -2328 1819 1593 1 786 346 164 0 0 chrUextra 26415897 26415958 -2588698 - G3_DM LINE Jockey -4093 512 452 1 786 3263 10 2 0 chrUextra 26416058 26416452 -2588204 - DM176_LTR LTR Gypsy -112 395 1 1 786 1226 24 0 46 chrUextra 26416452 26416605 -2588051 + STALKER4_LTR LTR Gypsy 258 402 0 1 786 300 25 0 24 chrUextra 26416605 26416646 -2588010 + STALKER4_I LTR Gypsy 1 40 -6490 1 786 519 115 0 0 chrUextra 26416768 26416855 -2587801 - SAR_DM Satellite Satellite -843 629 543 1 786 2166 182 12 18 chrUextra 26416866 26417376 -2587280 - SAR_DM Satellite Satellite -396 1076 570 1 786 3403 0 0 57 chrUextra 26417476 26417914 -2586742 - LSU-rRNA_Dme rRNA rRNA -3487 413 1 1 786 21 95 0 0 chrUextra 26417926 26417989 -2586667 + AT_rich Low_complexity Low_complexity 1 63 0 1 786 2424 177 11 14 chrUextra 26418195 26418767 -2585889 + SAR_DM Satellite Satellite 507 1076 -396 1 786 242 119 16 48 chrUextra 26418732 26418794 -2585862 - XDMR_DM Unknown Unknown 0 360 301 1 786 1620 2 0 0 chrUextra 26418897 26419503 -2585153 + (AATAG)n Simple_repeat Simple_repeat 1 606 0 1 786 372 43 0 0 chrUextra 26419603 26419649 -2585007 + (TAA)n Simple_repeat Simple_repeat 3 48 0 1 786 420 121 239 11 chrUextra 26419651 26419743 -2584913 + MDG1_LTR LTR Gypsy 89 201 -241 1 786 1042 20 0 0 chrUextra 26419737 26419883 -2584773 + FW_DM LINE Jockey 4547 4692 0 1 786 733 70 102 0 chrUextra 26419890 26420018 -2584638 + MDG1_I LTR Gypsy 4735 4875 -1721 1 786 1272 7 0 0 chrUextra 26420018 26420163 -2584493 + (TAA)n Simple_repeat Simple_repeat 3 147 0 1 786 22 35 0 0 chrUextra 26420429 26420458 -2584198 + AT_rich Low_complexity Low_complexity 1 29 0 1 786 208 200 31 0 chrUextra 26420767 26420832 -2583824 + (TAA)n Simple_repeat Simple_repeat 2 68 0 1 786 693 0 0 0 chrUextra 26421026 26421103 -2583553 + (TTCTC)n Simple_repeat Simple_repeat 5 81 0 1 786 2319 194 33 8 chrUextra 26421730 26422339 -2582317 + SAR_DM Satellite Satellite 209 832 -640 1 786 192 77 0 0 chrUextra 26422532 26422558 -2582098 + (A)n Simple_repeat Simple_repeat 1 26 0 1 786 503 194 152 54 chrUextra 26422587 26423016 -2581640 + ROVER-I_DM LTR Gypsy 131 601 -5983 1 786 4874 17 2 18 chrUextra 26423148 26423757 -2580899 - BATUMI_I LTR Pao -6211 1752 1154 1 786 2290 97 26 40 chrUextra 26423857 26424461 -2580195 - DMSAT6 Satellite Satellite -63 595 1 1 786 2725 176 10 5 chrUextra 26424570 26425175 -2579481 - SAR_DM Satellite Satellite -593 879 272 1 786 2757 220 20 37 chrUextra 26426710 26427616 -2577040 + SAR_DM Satellite Satellite 1 890 -514 1 786 685 50 10 20 chrUextra 26427536 26427637 -2577019 - ARS406_DM Unknown Unknown -164 189 90 1 786 1515 188 3 14 chrUextra 26427642 26428008 -2576648 + SAR_DM Satellite Satellite 496 857 -615 1 786 2328 92 23 15 chrUextra 26428116 26428720 -2575936 - DMSAT6 Satellite Satellite 0 609 1 1 786 1064 120 0 18 chrUextra 26428820 26429042 -2575614 + (TA)n Simple_repeat Simple_repeat 1 217 0 1 786 1107 136 0 6 chrUextra 26429050 26429408 -2575248 + (CATA)n Simple_repeat Simple_repeat 1 355 0 1 786 1476 183 36 3 chrUextra 26429529 26430138 -2574518 - SAR_DM Satellite Satellite -611 628 1 1 786 5298 3 2 0 chrUextra 26430238 26430847 -2573809 + SSU-rRNA_Dme rRNA rRNA 41 650 -1345 1 786 2463 174 38 11 chrUextra 26430947 26431556 -2573100 - SAR_DM Satellite Satellite -470 1002 378 1 786 4779 43 0 3 chrUextra 26431656 26432265 -2572391 - R1_DM LINE R1 -2046 3310 2704 1 786 1674 5 0 0 chrUextra 26432365 26432559 -2572097 - BATUMI_I LTR Pao -7769 194 1 1 786 2178 11 0 25 chrUextra 26432559 26432838 -2571818 - BATUMI_LTR LTR Pao 0 272 1 1 786 1831 0 17 17 chrUextra 26433091 26433331 -2571325 - NTS_DM Other Other 0 240 1 1 786 1825 8 17 13 chrUextra 26433331 26433570 -2571086 - NTS_DM Other Other 0 240 1 1 786 754 0 35 26 chrUextra 26433570 26433683 -2570973 - NTS_DM Other Other 0 240 127 1 786 1312 0 22 16 chrUextra 26433783 26433965 -2570691 + NTS_DM Other Other 58 240 0 1 786 1847 4 17 13 chrUextra 26433965 26434204 -2570452 + NTS_DM Other Other 1 240 0 1 786 1257 19 0 18 chrUextra 26434204 26434369 -2570287 + NTS_DM Other Other 1 162 -78 1 786 21 82 0 0 chrUextra 26434745 26434794 -2569862 + AT_rich Low_complexity Low_complexity 1 49 0 1 786 22 35 0 0 chrUextra 26434917 26434946 -2569710 + AT_rich Low_complexity Low_complexity 1 29 0 1 786 4413 49 0 20 chrUextra 26435203 26435808 -2568848 + R1_DM LINE R1 257 849 -4507 1 786 22 35 0 0 chrUextra 26436094 26436123 -2568533 + AT_rich Low_complexity Low_complexity 1 29 0 1 786 224 185 31 0 chrUextra 26436409 26436474 -2568182 + (TAA)n Simple_repeat Simple_repeat 2 68 0 1 786 5311 3 0 0 chrUextra 26436619 26437228 -2567428 + LSU-rRNA_Dme rRNA rRNA 2073 2681 -1219 1 786 4495 37 33 2 chrUextra 26437334 26437937 -2566719 - R1_DM LINE R1 -4105 1251 630 1 786 2836 109 74 39 chrUextra 26438037 26438646 -2566010 + STALKER4_I LTR Gypsy 601 1230 -5300 1 786 4579 21 0 2 chrUextra 26438747 26439353 -2565303 + ACCORD2_I LTR Gypsy 6477 7081 -131 1 786 2705 21 0 0 chrUextra 26439455 26439787 -2564869 + G2_DM LINE Jockey 2771 3102 0 1 786 419 233 97 0 chrUextra 26439909 26440044 -2564612 + TIRANT_I LTR Gypsy 3777 3855 -3837 1 786 22 0 0 0 chrUextra 26440362 26440384 -2564272 + AT_rich Low_complexity Low_complexity 1 22 0 1 786 937 34 0 0 chrUextra 26441346 26441463 -2563193 + DIVER2_I LTR Pao 2417 2533 -1614 1 786 4781 10 0 3 chrUextra 26441582 26442191 -2562465 - STALKER4_I LTR Gypsy -171 6359 5753 1 786 2682 163 23 11 chrUextra 26442291 26442900 -2561756 - SAR_DM Satellite Satellite -515 957 342 1 786 5097 2 0 2 chrUextra 26443023 26443609 -2561047 + LSU-rRNA_Dme rRNA rRNA 2640 3224 -676 1 786 5307 13 35 0 chrUextra 26443709 26444318 -2560338 + FW_DM LINE Jockey 531 1160 -3532 1 786 3023 170 8 10 chrUextra 26444418 26445025 -2559631 + SAR_DM Satellite Satellite 414 1019 -453 1 786 1128 312 35 29 chrUextra 26445855 26446403 -2558253 + HMSBEAGLE_I LTR Gypsy 4040 4590 -1939 1 786 3015 168 12 10 chrUextra 26446545 26447148 -2557508 - SAR_DM Satellite Satellite -500 972 369 1 786 5570 0 0 0 chrUextra 26447254 26447862 -2556794 - ROO_I LTR Pao -3872 4384 3777 1 786 5003 33 0 5 chrUextra 26447962 26448570 -2556086 + NINJA_I LTR Pao 1538 2142 -3869 1 786 5614 0 5 0 chrUextra 26448670 26449278 -2555378 + LSU-rRNA_Dme rRNA rRNA 3045 3655 -245 1 786 2595 100 5 23 chrUextra 26450086 26450694 -2553962 - DMSAT6 Satellite Satellite -61 596 1 1 786 1400 13 0 0 chrUextra 26450794 26450946 -2553710 + DMLTR5 LTR Gypsy 115 266 0 1 786 4013 2 26 4 chrUextra 26450945 26451402 -2553254 + HMSBEAGLE_I LTR Gypsy 1 467 -6062 1 786 2452 88 10 42 chrUextra 26451502 26452084 -2552572 - DMSAT6 Satellite Satellite -38 563 1 1 786 3318 96 104 48 chrUextra 26452213 26452818 -2551838 - DM297_I LTR Gypsy -5344 823 185 1 786 363 82 5 110 chrUextra 26452924 26453026 -2551630 + MDG1_I LTR Gypsy 6524 6596 0 1 786 1566 11 0 0 chrUextra 26453026 26453206 -2551450 + (TAA)n Simple_repeat Simple_repeat 1 180 0 1 786 1693 142 81 12 chrUextra 26453206 26453526 -2551130 + MDG1_LTR LTR Gypsy 48 389 -53 1 786 5130 5 7 2 chrUextra 26453626 26454234 -2550422 + TART LINE telomeric 9247 9857 -4620 1 786 2959 169 16 10 chrUextra 26454334 26454942 -2549714 - SAR_DM Satellite Satellite -649 823 212 1 786 5575 0 2 3 chrUextra 26455042 26455650 -2549006 + SSU-rRNA_Dme rRNA rRNA 586 1192 -803 1 786 4056 0 0 0 chrUextra 26455750 26456192 -2548464 - ROO_I LTR Pao -1094 7162 6721 1 786 1416 6 0 0 chrUextra 26456192 26456358 -2548298 - ROO_I LTR Pao -2283 5973 5808 1 786 2996 178 5 8 chrUextra 26457874 26458482 -2546174 - SAR_DM Satellite Satellite -563 909 304 1 786 5440 0 0 2 chrUextra 26458584 26459190 -2545466 - LSU-rRNA_Dme rRNA rRNA -2927 973 369 1 786 21 0 0 0 chrUextra 26459450 26459471 -2545185 + AT_rich Low_complexity Low_complexity 1 21 0 1 786 2116 202 86 36 chrUextra 26461415 26462021 -2542635 + TAHRE LINE telomeric 9260 9895 -568 1 786 1687 21 0 0 chrUextra 26462122 26462313 -2542343 + FW_DM LINE Jockey 4430 4620 -72 1 786 938 155 77 6 chrUextra 26462561 26462730 -2541926 + DNAREP1_DM LINE Penelope 22 202 -392 1 786 309 350 0 0 chrUextra 26463720 26463863 -2540793 - Gypsy7_I LTR Gypsy -4060 924 782 1 786 2060 12 74 0 chrUextra 26463904 26464146 -2540510 - PROTOP DNA P 0 4480 4221 1 786 3346 61 42 1 chrUextra 26464246 26464854 -2539802 + PROTOP DNA P 239 753 -3727 1 786 5294 16 5 5 chrUextra 26464954 26465562 -2539094 - Gypsy4_I LTR Gypsy -1113 5175 4568 1 786 1004 82 7 18 chrUextra 26465665 26466250 -2538406 + RSP Satellite Satellite 1 578 0 1 786 2058 41 0 0 chrUextra 26466370 26466613 -2538043 + DM1731_LTR LTR Copia 94 336 0 1 786 3275 6 3 3 chrUextra 26466613 26466978 -2537678 + DM1731_I LTR Copia 1 365 -3611 1 786 5325 20 0 0 chrUextra 26467080 26467686 -2536970 - R1_DM LINE R1 -1853 3503 2898 1 786 2732 200 12 5 chrUextra 26467787 26468391 -2536265 + SAR_DM Satellite Satellite 272 879 -593 1 786 201 94 0 0 chrUextra 26468534 26468566 -2536090 + (A)n Simple_repeat Simple_repeat 1 32 0 1 786 823 19 0 0 chrUextra 26469910 26470017 -2534639 + FW_DM LINE Jockey 4586 4692 0 1 786 4398 4 0 2 chrUextra 26470030 26470518 -2534138 - R1_DM LINE R1 -310 5046 4560 1 786 2864 184 7 8 chrUextra 26470618 26471221 -2533435 + SAR_DM Satellite Satellite 475 1076 -396 1 786 2964 178 10 7 chrUextra 26471326 26471930 -2532726 + SAR_DM Satellite Satellite 298 903 -569 1 786 2767 173 35 21 chrUextra 26472034 26472642 -2532014 - SAR_DM Satellite Satellite -558 914 299 1 786 34 24 0 0 chrUextra 26472938 26472979 -2531677 + AT_rich Low_complexity Low_complexity 1 41 0 1 786 773 164 379 47 chrUextra 26472990 26473349 -2531307 - TART LINE telomeric -3986 10491 10014 1 786 1865 108 16 60 chrUextra 26473519 26473835 -2530821 + Gypsy6A_LTR LTR Gypsy 1 302 -118 1 786 3027 63 7 17 chrUextra 26474886 26475291 -2529365 - Baggins1 LINE LOA -262 5191 4791 1 786 5290 21 0 0 chrUextra 26475574 26476182 -2528474 - NINJA_I LTR Pao -3304 2707 2100 1 98 2416 120 12 31 chrUextra 26476285 26476890 -2527766 - DMSAT6 Satellite Satellite -94 593 1 1 787 291 54 0 0 chrUextra 26476990 26477027 -2527629 + (TTCTC)n Simple_repeat Simple_repeat 3 39 0 1 787 5464 8 2 5 chrUextra 26479114 26479722 -2524934 - SSU-rRNA_Dme rRNA rRNA -201 1794 1189 1 787 5170 15 2 13 chrUextra 26479822 26480430 -2524226 + NINJA_I LTR Pao 4928 5528 -483 1 787 5485 0 2 2 chrUextra 26480530 26481138 -2523518 - R1_DM LINE R1 -1941 3415 2808 1 787 936 9 0 27 chrUextra 26481272 26481384 -2523272 + NTS_DM Other Other 25 133 -107 1 787 1350 18 0 6 chrUextra 26481384 26481549 -2523107 + NTS_DM Other Other 38 201 -39 1 787 21 57 0 0 chrUextra 26481549 26481584 -2523072 + AT_rich Low_complexity Low_complexity 1 35 0 1 787 847 19 9 36 chrUextra 26481610 26481722 -2522934 + NTS_DM Other Other 25 133 -107 1 787 846 0 0 10 chrUextra 26481722 26481819 -2522837 + NTS_DM Other Other 38 133 -107 1 787 249 0 0 0 chrUextra 26481819 26481846 -2522810 + NTS_DM Other Other 38 64 -176 1 787 1660 168 71 186 chrUextra 26481946 26482554 -2522102 - TAHRE LINE telomeric -2877 7586 7168 1 787 5300 18 2 0 chrUextra 26482654 26483262 -2521394 + STALKER4_I LTR Gypsy 2219 2827 -3703 1 787 303 112 16 34 chrUextra 26483362 26483434 -2521222 - HETA LINE telomeric -5037 9440 9381 1 787 1916 140 119 22 chrUextra 26483434 26483836 -2520820 + GTWIN_LTR LTR Gypsy 1 441 -54 1 787 468 62 0 30 chrUextra 26483903 26483970 -2520686 - HETA LINE telomeric -1197 4884 4825 1 787 4005 14 22 12 chrUextra 26484070 26484559 -2520097 + BATUMI_I LTR Pao 6508 7001 -962 1 787 1641 271 47 48 chrUextra 26484077 26484678 -2519978 - MAX_I LTR Pao -744 7170 6571 1 787 1953 187 8 18 chrUextra 26484778 26484809 -2519847 - SAR_DM Satellite Satellite -439 602 562 1 787 1095 95 0 0 chrUextra 26484809 26484967 -2519689 + ARS406_DM Unknown Unknown 1 158 -195 1 787 1953 187 8 18 chrUextra 26484967 26485386 -2519270 - SAR_DM Satellite Satellite -439 561 1 1 787 2888 166 45 8 chrUextra 26485487 26486094 -2518562 + SAR_DM Satellite Satellite 246 874 -598 1 787 3440 166 8 0 chrUextra 26486194 26486802 -2517854 - Gypsy5_I LTR Gypsy -1604 4905 4293 1 787 1553 21 0 16 chrUextra 26486902 26487096 -2517560 - NTS_DM Other Other -49 191 1 1 787 1903 17 17 17 chrUextra 26487096 26487336 -2517320 - NTS_DM Other Other 0 240 1 1 787 1329 6 23 17 chrUextra 26487336 26487510 -2517146 - NTS_DM Other Other 0 240 66 1 787 1229 135 80 20 chrUextra 26487610 26487860 -2516796 + ROVER-I_DM LTR Gypsy 6320 6584 0 1 787 1766 132 42 42 chrUextra 26487860 26488216 -2516440 + ROVER-LTR_DM LTR Gypsy 1 356 -11 1 787 5168 36 0 0 chrUextra 26489026 26489634 -2515022 - MAX_I LTR Pao -2209 5705 5098 1 787 3045 178 10 3 chrUextra 26489734 26490342 -2514314 + SAR_DM Satellite Satellite 267 878 -594 1 787 289 0 0 0 chrUextra 26490442 26490474 -2514182 - LSU-rRNA_Dme rRNA rRNA -2081 1819 1788 1 787 4646 4 9 6 chrUextra 26490516 26491049 -2513607 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1257 1 787 5056 23 40 0 chrUextra 26491149 26491756 -2512900 - STALKER4_I LTR Gypsy -3117 3413 2783 1 787 3999 2 0 0 chrUextra 26491891 26492319 -2512337 + ROO_LTR LTR Pao 1 428 0 1 787 1350 0 0 0 chrUextra 26492319 26492463 -2512193 + ROO_I LTR Pao 1 144 -8112 1 787 2866 180 10 11 chrUextra 26492563 26493170 -2511486 - SAR_DM Satellite Satellite -489 983 378 1 787 5626 0 0 0 chrUextra 26493270 26493877 -2510779 + ROO_I LTR Pao 1978 2584 -5672 1 787 2077 43 0 12 chrUextra 26493977 26494234 -2510422 - G2_DM LINE Jockey -1438 1664 1411 1 787 264 0 109 0 chrUextra 26494356 26494402 -2510254 + (TTATA)n Simple_repeat Simple_repeat 2 52 0 1 787 3126 64 22 10 chrUextra 26494684 26495094 -2509562 - DMCR1A LINE CR1 -401 4069 3655 1 787 1491 98 0 5 chrUextra 26495087 26495291 -2509365 - DMCR1A LINE CR1 -950 3520 3318 1 787 2502 97 13 40 chrUextra 26495391 26495998 -2508658 - DMSAT6 Satellite Satellite -82 590 1 1 787 2991 162 15 12 chrUextra 26496107 26496705 -2507951 - SAR_DM Satellite Satellite -569 903 304 1 787 2861 32 0 0 chrUextra 26496806 26497153 -2507503 - I_DM LINE I -5269 962 616 1 787 1620 0 0 0 chrUextra 26497153 26497410 -2507246 + (GAGAA)n Simple_repeat Simple_repeat 1 257 0 1 787 21 89 0 0 chrUextra 26497997 26498053 -2506603 + AT_rich Low_complexity Low_complexity 1 56 0 1 787 374 22 0 21 chrUextra 26498072 26498119 -2506537 - SSU-rRNA_Dme rRNA rRNA 0 1995 1950 1 787 3309 0 0 0 chrUextra 26499633 26500000 -2504656 + LSU-rRNA_Dme rRNA rRNA 573 939 -2961 1 787 2181 4 0 0 chrUextra 26500000 26500240 -2504416 + LSU-rRNA_Dme rRNA rRNA 940 1179 -2721 1 787 1833 5 0 0 chrUextra 26500340 26500543 -2504113 - SSU-rRNA_Dme rRNA rRNA -1792 203 1 1 787 32 0 0 0 chrUextra 26500675 26500707 -2503949 + AT_rich Low_complexity Low_complexity 1 32 0 1 787 444 37 0 0 chrUextra 26501756 26501810 -2502846 + (TTCTC)n Simple_repeat Simple_repeat 5 58 0 1 787 4548 46 76 5 chrUextra 26502461 26503068 -2501588 - MDG1_I LTR Gypsy -2229 4367 3718 1 787 3915 2 0 54 chrUextra 26503291 26503775 -2500881 + LSU-rRNA_Dme rRNA rRNA 1 458 -3442 1 787 24 0 0 0 chrUextra 26504426 26504450 -2500206 + AT_rich Low_complexity Low_complexity 1 24 0 1 787 1620 0 0 0 chrUextra 26504582 26504971 -2499685 + (AATAG)n Simple_repeat Simple_repeat 1 389 0 1 787 1962 57 69 0 chrUextra 26505289 26505551 -2499105 + DM1731_LTR LTR Copia 57 336 0 1 787 3095 3 3 0 chrUextra 26505551 26505896 -2498760 + DM1731_I LTR Copia 1 346 -3630 1 787 4871 25 3 0 chrUextra 26505996 26506568 -2498088 + R1_DM LINE R1 4783 5356 0 1 787 2814 187 10 3 chrUextra 26506703 26507310 -2497346 + SAR_DM Satellite Satellite 240 850 -622 1 787 2860 176 8 8 chrUextra 26507410 26508013 -2496643 - SAR_DM Satellite Satellite -471 1001 399 1 787 2544 180 25 26 chrUextra 26508825 26509431 -2495225 - SAR_DM Satellite Satellite -361 1111 507 1 787 2788 175 8 13 chrUextra 26510242 26510845 -2493811 - SAR_DM Satellite Satellite -569 903 304 1 787 5359 7 0 5 chrUextra 26510945 26511552 -2493104 + G2_DM LINE Jockey 1177 1780 -1322 1 787 5519 0 2 0 chrUextra 26511652 26512259 -2492397 - SSU-rRNA_Dme rRNA rRNA -898 1097 490 1 787 2460 176 26 8 chrUextra 26512359 26512965 -2491691 - SAR_DM Satellite Satellite -243 1229 373 1 787 2517 184 30 21 chrUextra 26513067 26513673 -2490983 - SAR_DM Satellite Satellite -361 1111 501 1 787 628 115 10 0 chrUextra 26513773 26513877 -2490779 - ARS406_DM Unknown Unknown -248 105 1 1 787 2664 196 5 7 chrUextra 26513784 26514380 -2490276 + SAR_DM Satellite Satellite 195 789 -683 1 787 4698 13 2 2 chrUextra 26514480 26515016 -2489640 + R1_DM LINE R1 4821 5356 0 1 787 316 26 0 0 chrUextra 26515049 26515087 -2489569 + R1_DM LINE R1 1 38 -5318 1 787 2643 195 7 8 chrUextra 26515188 26515794 -2488862 + SAR_DM Satellite Satellite 205 809 -663 1 787 739 306 65 43 chrUextra 26515912 26516469 -2488187 - MDG1_I LTR Gypsy -3858 2738 2170 1 787 2761 176 15 8 chrUextra 26516601 26517208 -2487448 + SAR_DM Satellite Satellite 197 807 -665 1 787 2917 166 10 8 chrUextra 26517309 26517910 -2486746 - SAR_DM Satellite Satellite -502 970 369 1 787 25 0 0 0 chrUextra 26518418 26518443 -2486213 + AT_rich Low_complexity Low_complexity 1 25 0 1 787 2745 163 123 23 chrUextra 26518722 26519324 -2485332 - TAHRE LINE telomeric -102 10361 9700 1 787 1185 68 0 149 chrUextra 26519429 26519671 -2484985 - Invader3_LTR LTR Gypsy -92 206 1 1 787 3053 11 25 0 chrUextra 26519671 26520036 -2484620 - Invader3_I LTR Gypsy 0 4888 4515 1 787 5363 2 0 2 chrUextra 26520136 26520743 -2483913 - ROO_I LTR Pao -2774 5482 4877 1 787 2715 171 12 28 chrUextra 26520843 26521449 -2483207 + SAR_DM Satellite Satellite 523 1118 -354 1 787 4912 16 84 0 chrUextra 26521550 26522157 -2482499 - STALKER4_I LTR Gypsy -3337 3193 2536 1 787 2781 176 10 13 chrUextra 26522257 26522863 -2481793 - SAR_DM Satellite Satellite -500 972 369 1 787 2929 171 8 8 chrUextra 26522965 26523571 -2481085 - SAR_DM Satellite Satellite -610 862 257 1 787 2523 197 14 8 chrUextra 26523671 26524261 -2480395 - SAR_DM Satellite Satellite -693 779 187 1 787 668 120 0 8 chrUextra 26524160 26524278 -2480378 + ARS406_DM Unknown Unknown 1 117 -236 1 787 361 3 229 0 chrUextra 26525344 26525685 -2478971 + (ATATG)n Simple_repeat Simple_repeat 1 418 0 1 787 1580 12 0 8 chrUextra 26525792 26526043 -2478613 + (TTCTC)n Simple_repeat Simple_repeat 1 249 0 1 787 1133 78 6 0 chrUextra 26526043 26526222 -2478434 + (CTTAT)n Simple_repeat Simple_repeat 1 180 0 1 787 1358 18 0 6 chrUextra 26526233 26526399 -2478257 + (CTTAT)n Simple_repeat Simple_repeat 2 166 0 1 787 5330 5 5 3 chrUextra 26526499 26527106 -2477550 + LSU-rRNA_Dme rRNA rRNA 1098 1705 -2195 1 787 5532 0 2 2 chrUextra 26527206 26527813 -2476843 - LSU-rRNA_Dme rRNA rRNA -310 3590 2984 1 787 2803 178 10 10 chrUextra 26527913 26528520 -2476136 + SAR_DM Satellite Satellite 462 1068 -404 1 787 2855 161 12 10 chrUextra 26528639 26529227 -2475429 + SAR_DM Satellite Satellite 326 914 -558 1 787 2620 90 17 32 chrUextra 26529335 26529934 -2474722 + DMSAT6 Satellite Satellite 1 590 0 1 787 3725 5 0 0 chrUextra 26530741 26531155 -2473501 - R2_DM LINE R2 -2538 1069 656 1 787 1768 5 0 0 chrUextra 26531153 26531348 -2473308 - LSU-rRNA_Dme rRNA rRNA -1321 2579 2385 1 787 5432 0 2 5 chrUextra 26531448 26532055 -2472601 + SSU-rRNA_Dme rRNA rRNA 1125 1729 -266 1 787 3755 25 2 0 chrUextra 26532155 26532597 -2472059 - R1_DM LINE R1 -3358 1998 1556 1 787 1207 71 0 0 chrUextra 26532608 26532762 -2471894 - R1_DM LINE R1 -3897 1459 1306 1 787 2582 171 21 14 chrUextra 26532863 26533467 -2471189 - SAR_DM Satellite Satellite -711 607 1 1 787 2281 56 14 83 chrUextra 26534281 26534629 -2470027 - Baggins1 LINE LOA -4987 466 143 1 787 2765 186 18 5 chrUextra 26534983 26535589 -2469067 + SAR_DM Satellite Satellite 256 869 -603 1 787 4761 4 0 0 chrUextra 26535689 26536242 -2468414 + Invader2_I LTR Gypsy 3772 4324 -268 1 787 278 39 78 0 chrUextra 26536244 26536295 -2468361 + Invader2_I LTR Gypsy 4465 4519 -73 1 787 5521 0 2 2 chrUextra 26536395 26537001 -2467655 - LSU-rRNA_Dme rRNA rRNA -372 3528 2923 1 787 1036 41 0 7 chrUextra 26537101 26537247 -2467409 + NTS_DM Other Other 57 201 -39 1 787 907 9 0 27 chrUextra 26537299 26537411 -2467245 + NTS_DM Other Other 25 133 -107 1 787 1284 24 0 6 chrUextra 26537411 26537576 -2467080 + NTS_DM Other Other 38 201 -39 1 787 21 57 0 0 chrUextra 26537576 26537611 -2467045 + AT_rich Low_complexity Low_complexity 1 35 0 1 787 473 30 29 43 chrUextra 26537637 26537707 -2466949 + NTS_DM Other Other 25 93 -147 1 787 5043 21 10 2 chrUextra 26537807 26538413 -2466243 + DOC2_DM LINE Jockey 891 1501 -3292 1 787 1393 121 22 72 chrUextra 26538513 26538789 -2465867 - Gypsy6A_LTR LTR Gypsy -158 262 1 1 787 1850 61 59 67 chrUextra 26538789 26539119 -2465537 - MAX_I LTR Pao -7419 495 127 1 787 4835 2 0 48 chrUextra 26539219 26539825 -2464831 + LSU-rRNA_Dme rRNA rRNA 75 651 -3249 1 787 2478 194 9 10 chrUextra 26539925 26540503 -2464153 + SAR_DM Satellite Satellite 500 1076 -396 1 787 231 185 0 18 chrUextra 26540476 26540531 -2464125 - XDMR_DM Unknown Unknown -7 353 300 1 787 32 0 0 0 chrUextra 26540725 26540757 -2463899 + AT_rich Low_complexity Low_complexity 1 32 0 1 787 3168 3 0 0 chrUextra 26540889 26541237 -2463419 + SSU-rRNA_Dme rRNA rRNA 1 348 -1647 1 787 5151 12 2 3 chrUextra 26541339 26541943 -2462713 - DMRT1B LINE R1 -3887 1296 694 1 787 5488 0 2 2 chrUextra 26542045 26542649 -2462007 + SSU-rRNA_Dme rRNA rRNA 1224 1827 -168 1 787 2875 175 10 8 chrUextra 26543455 26544061 -2460595 + SAR_DM Satellite Satellite 267 873 -599 1 787 2888 174 8 7 chrUextra 26544162 26544764 -2459892 - SAR_DM Satellite Satellite -577 895 293 1 787 5312 0 0 2 chrUextra 26544867 26545473 -2459183 + LSU-rRNA_Dme rRNA rRNA 244 848 -3052 1 787 5059 10 5 0 chrUextra 26545573 26546179 -2458477 + Invader2_I LTR Gypsy 3758 4366 -226 1 787 3054 168 8 3 chrUextra 26546279 26546877 -2457779 - SAR_DM Satellite Satellite -626 846 246 1 787 282 125 0 0 chrUextra 26546837 26546885 -2457771 + ARS406_DM Unknown Unknown 1 48 -305 1 787 3754 5 0 0 chrUextra 26546985 26547404 -2457252 + LSU-rRNA_Dme rRNA rRNA 2113 2531 -1369 1 787 1578 26 5 5 chrUextra 26547401 26547591 -2457065 + R2_DM LINE R2 5 194 -3413 1 787 2676 179 15 10 chrUextra 26547691 26548283 -2456373 + SAR_DM Satellite Satellite 482 1076 -396 1 787 2588 92 20 17 chrUextra 26548397 26549003 -2455653 + DMSAT6 Satellite Satellite 1 607 -97 1 787 5105 2 2 0 chrUextra 26549149 26549709 -2454947 - LSU-rRNA_Dme rRNA rRNA 0 3900 3340 1 787 4496 25 0 0 chrUextra 26549809 26550415 -2454241 - TART_B1 LINE telomeric -8397 2257 1652 1 787 2353 73 0 6 chrUextra 26550805 26551121 -2453535 + G2_DM LINE Jockey 2448 2761 -341 1 787 5082 23 2 0 chrUextra 26551221 26551827 -2452829 - MDG1_I LTR Gypsy -1660 4936 4330 1 787 21 57 0 0 chrUextra 26551998 26552033 -2452623 + AT_rich Low_complexity Low_complexity 1 35 0 1 787 834 275 6 9 chrUextra 26552186 26552531 -2452125 - Gypsy11_I LTR Gypsy -137 3387 3044 1 787 1123 20 0 7 chrUextra 26552635 26552784 -2451872 + NTS_DM Other Other 54 201 -39 1 787 21 57 0 0 chrUextra 26552784 26552819 -2451837 + AT_rich Low_complexity Low_complexity 1 35 0 1 787 840 9 9 36 chrUextra 26552845 26552957 -2451699 + NTS_DM Other Other 25 133 -107 1 787 851 0 0 0 chrUextra 26552957 26553053 -2451603 + NTS_DM Other Other 38 133 -107 1 787 1352 22 16 21 chrUextra 26553053 26553239 -2451417 + NTS_DM Other Other 38 222 -18 1 787 5530 2 2 0 chrUextra 26553339 26553945 -2450711 + LSU-rRNA_Dme rRNA rRNA 2945 3551 -349 1 787 2685 177 8 25 chrUextra 26554046 26554647 -2450009 + SAR_DM Satellite Satellite 500 1090 -382 1 787 5161 33 0 0 chrUextra 26555457 26556063 -2448593 + R1_DM LINE R1 4202 4807 -549 1 787 2909 162 19 15 chrUextra 26556172 26556768 -2447888 + SAR_DM Satellite Satellite 191 788 -684 1 787 2646 164 33 35 chrUextra 26557575 26558181 -2446475 + SAR_DM Satellite Satellite 201 805 -667 1 787 1141 290 28 40 chrUextra 26558294 26558886 -2445770 - BLOOD_I LTR Gypsy -4148 2465 1828 1 787 2775 258 45 9 chrUextra 26558992 26560285 -2444371 - SAR_DM Satellite Satellite -514 1339 1 1 787 1620 0 0 0 chrUextra 26560416 26560776 -2443880 + (GAGAA)n Simple_repeat Simple_repeat 1 360 0 1 787 2834 179 15 7 chrUextra 26561113 26561709 -2442947 - SAR_DM Satellite Satellite -635 837 237 1 787 23 0 0 0 chrUextra 26561948 26561971 -2442685 + AT_rich Low_complexity Low_complexity 1 23 0 1 787 2399 130 17 19 chrUextra 26562545 26563123 -2441533 - DMSAT6 Satellite Satellite -3 576 1 1 787 5518 2 0 0 chrUextra 26563929 26564535 -2440121 + LSU-rRNA_Dme rRNA rRNA 477 1082 -2818 1 787 1559 12 0 4 chrUextra 26564635 26564884 -2439772 + (CACAA)n Simple_repeat Simple_repeat 1 248 0 1 787 1290 62 5 9 chrUextra 26565063 26565241 -2439415 + DMRT1B LINE R1 1 336 -4847 1 787 4901 7 38 55 chrUextra 26565341 26565947 -2438709 + MICROPIA_I LTR Gypsy 1486 2081 -2395 1 787 4304 4 0 0 chrUextra 26566047 26566522 -2438134 - DMRT1B LINE R1 -227 4956 4482 1 787 1179 0 0 0 chrUextra 26566522 26566653 -2438003 + (TTGTG)n Simple_repeat Simple_repeat 2 132 0 1 787 2422 105 22 12 chrUextra 26566761 26567359 -2437297 - DMSAT6 Satellite Satellite 0 603 1 1 787 5125 40 0 0 chrUextra 26567459 26568065 -2436591 - R1_DM LINE R1 -3433 1923 1318 1 787 1620 0 0 0 chrUextra 26568165 26568467 -2436189 + (GAGAA)n Simple_repeat Simple_repeat 1 302 0 1 787 815 0 0 0 chrUextra 26568871 26568958 -2435698 - SSU-rRNA_Dme rRNA rRNA -1908 87 1 1 787 32 0 0 0 chrUextra 26569091 26569123 -2435533 + AT_rich Low_complexity Low_complexity 1 32 0 1 787 25 0 0 0 chrUextra 26569452 26569477 -2435179 + AT_rich Low_complexity Low_complexity 1 25 0 1 787 2922 178 8 7 chrUextra 26569577 26570167 -2434489 - SAR_DM Satellite Satellite -556 916 326 1 787 5582 0 2 3 chrUextra 26570283 26570889 -2433767 - SSU-rRNA_Dme rRNA rRNA -180 1815 1211 1 787 2413 176 8 5 chrUextra 26571001 26571595 -2433061 - SAR_DM Satellite Satellite -396 596 1 1 787 2040 213 50 26 chrUextra 26571697 26572194 -2432462 - Gypsy12_LTR LTR Gypsy -1827 509 1 1 787 828 74 0 0 chrUextra 26572193 26572301 -2432355 - Gypsy12_I LTR Gypsy 0 5546 5439 1 787 659 50 0 29 chrUextra 26572403 26572506 -2432150 + NTS_DM Other Other 102 201 -39 1 787 901 28 0 27 chrUextra 26572558 26572670 -2431986 + NTS_DM Other Other 25 133 -107 1 787 1188 61 0 12 chrUextra 26572670 26572836 -2431820 + NTS_DM Other Other 38 201 -39 1 787 923 18 0 27 chrUextra 26572888 26573000 -2431656 + NTS_DM Other Other 25 133 -107 1 787 1826 25 17 21 chrUextra 26573142 26573383 -2431273 + NTS_DM Other Other 1 240 0 1 787 1899 17 17 17 chrUextra 26573383 26573623 -2431033 + NTS_DM Other Other 1 240 0 1 787 828 11 0 0 chrUextra 26573623 26573713 -2430943 + NTS_DM Other Other 1 90 -150 1 787 3019 173 12 5 chrUextra 26573826 26574419 -2430237 - SAR_DM Satellite Satellite -620 852 256 1 787 1673 0 20 15 chrUextra 26574519 26574723 -2429933 + NTS_DM Other Other 36 240 0 1 787 1992 4 17 13 chrUextra 26574723 26574962 -2429694 + NTS_DM Other Other 1 240 0 1 787 1362 19 0 0 chrUextra 26574962 26575119 -2429537 + NTS_DM Other Other 1 157 -83 1 787 23 68 0 0 chrUextra 26576441 26576485 -2428171 + AT_rich Low_complexity Low_complexity 1 44 0 1 787 713 0 0 0 chrUextra 26576635 26576712 -2427944 + LSU-rRNA_Dme rRNA rRNA 2506 2582 -1318 1 787 4830 6 0 0 chrUextra 26576716 26577240 -2427416 + R2_DM LINE R2 985 1508 -2099 1 787 2707 183 7 24 chrUextra 26577340 26577927 -2426729 + SAR_DM Satellite Satellite 500 1076 -396 1 787 917 72 3 18 chrUextra 26578045 26578650 -2426006 + RSP Satellite Satellite 1 596 0 1 787 1210 249 78 92 chrUextra 26578754 26579355 -2425301 + Gypsy12_LTR LTR Gypsy 401 993 -1343 1 787 5166 28 0 0 chrUextra 26579459 26580060 -2424596 - R1_DM LINE R1 -2146 3210 2610 1 787 2480 95 26 26 chrUextra 26580160 26580748 -2423908 + DMSAT6 Satellite Satellite 1 588 -37 1 787 483 133 100 0 chrUextra 26580887 26580977 -2423679 + DNAREP1_DM LINE Penelope 1 99 -495 1 787 2716 56 66 31 chrUextra 26581051 26581468 -2423188 + DM176_LTR LTR Gypsy 64 481 -26 1 787 2416 89 8 33 chrUextra 26581570 26582175 -2422481 - DMSAT6 Satellite Satellite -120 589 1 1 787 513 204 0 0 chrUextra 26582279 26582426 -2422230 + (CATAA)n Simple_repeat Simple_repeat 2 148 0 1 787 5458 0 2 0 chrUextra 26582980 26583585 -2421071 - LSU-rRNA_Dme rRNA rRNA -2877 1023 418 1 787 1275 7 0 0 chrUextra 26583685 26583823 -2420833 - ROO_I LTR Pao -8118 138 1 1 787 3879 14 0 2 chrUextra 26583823 26584252 -2420404 - ROO_LTR LTR Pao 0 428 1 1 787 354 0 0 0 chrUextra 26584252 26584290 -2420366 - ROO_I LTR Pao 0 8256 8219 1 787 1026 80 7 20 chrUextra 26584396 26584995 -2419661 + RSP Satellite Satellite 1 591 0 1 787 5508 5 0 0 chrUextra 26585095 26585700 -2418956 - R1_DM LINE R1 -1625 3731 3127 1 787 3026 171 30 5 chrUextra 26585804 26586405 -2418251 + SAR_DM Satellite Satellite 246 861 -611 1 787 1924 5 0 5 chrUextra 26586505 26586717 -2417939 + R1_DM LINE R1 5146 5356 0 1 787 3650 2 0 0 chrUextra 26586715 26587110 -2417546 + LSU-rRNA_Dme rRNA rRNA 2640 3034 -866 1 787 897 0 113 0 chrUextra 26587210 26587334 -2417322 + Invader2_I LTR Gypsy 4455 4592 0 1 787 2329 23 8 0 chrUextra 26587334 26587598 -2417058 + Invader2_LTR LTR Gypsy 1 266 0 1 787 719 231 84 24 chrUextra 26587602 26587815 -2416841 + Gypsy6_I LTR Gypsy 3447 3672 -3340 1 787 3030 167 13 10 chrUextra 26587915 26588520 -2416136 - SAR_DM Satellite Satellite -436 1036 430 1 787 21 89 0 0 chrUextra 26588965 26589021 -2415635 + AT_rich Low_complexity Low_complexity 1 56 0 1 787 1714 5 0 0 chrUextra 26589040 26589225 -2415431 - SSU-rRNA_Dme rRNA rRNA 0 1995 1811 1 787 5092 0 38 2 chrUextra 26589325 26589930 -2414726 - ROO_I LTR Pao -7094 1162 536 1 787 5209 17 0 3 chrUextra 26590030 26590635 -2414021 + NOMAD_I LTR Gypsy 5548 6150 -422 1 787 228 183 68 27 chrUextra 26590743 26590816 -2413840 + NTS_DM Other Other 145 220 -20 1 787 534 119 36 0 chrUextra 26590839 26590923 -2413733 + NTS_DM Other Other 4 90 -150 1 787 28 48 0 0 chrUextra 26591196 26591238 -2413418 + AT_rich Low_complexity Low_complexity 1 42 0 1 787 3634 0 3 0 chrUextra 26591440 26591830 -2412826 - LSU-rRNA_Dme rRNA rRNA -1722 2178 1788 1 787 1471 6 11 6 chrUextra 26591871 26592045 -2412611 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1617 1 787 5111 31 0 2 chrUextra 26592145 26592750 -2411906 + NINJA_I LTR Pao 1752 2355 -3656 1 787 5263 22 0 0 chrUextra 26592850 26593448 -2411208 + R1_DM LINE R1 3169 3766 -1590 1 787 5234 23 2 2 chrUextra 26593555 26594160 -2410496 - DMRT1B LINE R1 -337 4846 4242 1 787 5389 8 2 2 chrUextra 26594965 26595570 -2409086 + FW_DM LINE Jockey 1547 2151 -2541 1 787 1620 0 0 0 chrUextra 26595682 26595862 -2408794 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 787 499 325 54 47 chrUextra 26596389 26596924 -2407732 + Invader3_I LTR Gypsy 2491 3029 -1859 1 787 1913 43 6 5 chrUextra 26597080 26597428 -2407228 + TABOR_I LTR Gypsy 5878 6336 0 1 787 2435 0 0 0 chrUextra 26597426 26597685 -2406971 + TABOR_LTR LTR Gypsy 1 259 -247 1 787 2714 178 8 20 chrUextra 26597792 26598383 -2406273 + SAR_DM Satellite Satellite 536 1119 -353 1 787 240 0 0 0 chrUextra 26598490 26598516 -2406140 - NTS_DM Other Other -177 63 38 1 787 936 9 0 27 chrUextra 26598516 26598628 -2406028 - NTS_DM Other Other -107 133 25 1 787 21 57 0 0 chrUextra 26598654 26598689 -2405967 + AT_rich Low_complexity Low_complexity 1 35 0 1 787 1323 24 0 6 chrUextra 26598689 26598854 -2405802 - NTS_DM Other Other -39 201 38 1 787 936 9 0 27 chrUextra 26598854 26598966 -2405690 - NTS_DM Other Other -107 133 25 1 787 515 40 0 13 chrUextra 26599018 26599095 -2405561 - NTS_DM Other Other -39 201 126 1 787 2772 188 16 7 chrUextra 26599900 26600505 -2404151 + SAR_DM Satellite Satellite 198 808 -664 1 787 2460 98 8 21 chrUextra 26600605 26601210 -2403446 - DMSAT6 Satellite Satellite -89 596 1 1 787 3160 36 313 43 chrUextra 26601310 26601888 -2402768 + MDG1_I LTR Gypsy 5863 6596 0 1 787 4609 4 4 0 chrUextra 26602015 26602521 -2402135 - R1_DM LINE R1 -4848 508 1 1 787 241 36 0 0 chrUextra 26602521 26602549 -2402107 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2605 1 787 646 0 0 0 chrUextra 26602551 26602620 -2402036 - LSU-rRNA_Dme rRNA rRNA -1246 2654 2586 1 787 2633 184 7 28 chrUextra 26602720 26603325 -2401331 - SAR_DM Satellite Satellite -356 1116 525 1 787 1439 0 0 0 chrUextra 26604130 26604285 -2400371 - HOBO DNA hAT -2860 156 2 1 787 189 0 0 0 chrUextra 26604323 26604344 -2400312 + (AGGGGG)n Simple_repeat Simple_repeat 4 24 0 1 787 195 42 0 0 chrUextra 26604395 26604419 -2400237 + (TTTC)n Simple_repeat Simple_repeat 3 26 0 1 787 5073 20 93 2 chrUextra 26604835 26605440 -2399216 + MAX_I LTR Pao 3095 3754 -4160 1 787 4393 74 2 31 chrUextra 26605540 26606143 -2398513 + Gypsy10_I LTR Gypsy 2522 3106 -2172 1 787 727 216 6 19 chrUextra 26606397 26606553 -2398103 + HETRP_DM Satellite Satellite 1529 1682 -190 1 787 727 206 0 7 chrUextra 26606706 26606848 -2397808 + HETRP_DM Satellite Satellite 1529 1669 -203 1 787 2832 187 13 7 chrUextra 26606951 26607555 -2397101 + SAR_DM Satellite Satellite 192 799 -673 1 788 29 47 0 0 chrUextra 26607987 26608030 -2396626 + AT_rich Low_complexity Low_complexity 1 43 0 1 788 5454 3 0 0 chrUextra 26608360 26608965 -2395691 + ROO_I LTR Pao 3046 3650 -4606 1 788 5449 0 3 0 chrUextra 26609065 26609670 -2394986 + LSU-rRNA_Dme rRNA rRNA 227 833 -3067 1 788 963 68 8 0 chrUextra 26609770 26609902 -2394754 + ARS406_DM Unknown Unknown 57 189 -164 1 788 2880 178 8 8 chrUextra 26609786 26610375 -2394281 - SAR_DM Satellite Satellite -542 930 342 1 788 2504 98 8 42 chrUextra 26610475 26611072 -2393584 + DMSAT6 Satellite Satellite 1 577 -51 1 788 5046 11 0 5 chrUextra 26611182 26611785 -2392871 - Invader2_I LTR Gypsy -273 4319 3626 1 788 2718 171 10 12 chrUextra 26611885 26612490 -2392166 - SAR_DM Satellite Satellite -435 1037 434 1 788 4300 22 5 41 chrUextra 26612590 26613195 -2391461 - Gypsy12_LTR LTR Gypsy -800 1536 954 1 788 5242 0 0 0 chrUextra 26613295 26613900 -2390756 - HETA LINE telomeric -3283 2798 2194 1 788 5134 3 0 0 chrUextra 26614000 26614605 -2390051 + ROO_I LTR Pao 4845 5449 -2807 1 788 4802 45 0 0 chrUextra 26614705 26615310 -2389346 - R1_DM LINE R1 -3512 1844 1240 1 788 5145 2 0 0 chrUextra 26615410 26616015 -2388641 - ROO_I LTR Pao -3812 4444 3840 1 788 1702 0 14 5 chrUextra 26616117 26616330 -2388326 - NTS_DM Other Other -25 215 1 1 788 1850 4 17 13 chrUextra 26616330 26616569 -2388087 - NTS_DM Other Other 0 240 1 1 788 929 27 26 26 chrUextra 26616569 26616720 -2387936 - NTS_DM Other Other 0 240 90 1 788 3210 41 0 2 chrUextra 26617010 26617425 -2387231 - G2_DM LINE Jockey -46 3056 2643 1 788 1657 18 18 18 chrUextra 26617527 26617756 -2386900 - NTS_DM Other Other -11 229 1 1 788 1408 20 20 20 chrUextra 26617756 26617959 -2386697 - NTS_DM Other Other 0 240 38 1 788 802 10 0 0 chrUextra 26617959 26618055 -2386601 - NTS_DM Other Other -107 133 38 1 788 549 13 13 0 chrUextra 26618055 26618130 -2386526 - NTS_DM Other Other -107 133 58 1 788 4781 26 7 2 chrUextra 26618232 26618835 -2385821 - R1_DM LINE R1 -2161 3195 2590 1 788 2586 74 18 13 chrUextra 26618935 26619540 -2385116 - DMSAT6 Satellite Satellite -418 608 1 1 788 2446 33 184 11 chrUextra 26619642 26620245 -2384411 - PROTOP_B DNA P -407 746 39 1 788 1041 95 0 0 chrUextra 26620706 26620950 -2383706 + (ACATG)n Simple_repeat Simple_repeat 1 244 0 1 788 5140 2 2 5 chrUextra 26621754 26622358 -2382298 + LSU-rRNA_Dme rRNA rRNA 891 1492 -2408 1 788 4017 2 0 9 chrUextra 26622596 26623062 -2381594 + SSU-rRNA_Dme rRNA rRNA 1 462 -1533 1 788 2474 181 12 10 chrUextra 26623162 26623763 -2380893 - SAR_DM Satellite Satellite -502 970 369 1 788 2388 0 3 3 chrUextra 26623869 26624153 -2380503 + DM297_LTR LTR Gypsy 131 414 0 1 788 2580 156 8 8 chrUextra 26624570 26625094 -2379562 + SAR_DM Satellite Satellite 380 903 -569 1 788 532 41 0 0 chrUextra 26625101 26625174 -2379482 - ARS406_DM Unknown Unknown -195 158 86 1 788 32 0 0 0 chrUextra 26625312 26625344 -2379312 + AT_rich Low_complexity Low_complexity 1 32 0 1 788 3524 2 0 0 chrUextra 26625476 26625878 -2378778 + SSU-rRNA_Dme rRNA rRNA 1 402 -1593 1 788 3502 264 39 24 chrUextra 26625981 26627282 -2377374 - SAR_DM Satellite Satellite -262 1320 1 1 788 1547 255 77 50 chrUextra 26627387 26627986 -2376670 - Gypsy2_I LTR Gypsy -1178 4957 4343 1 788 2460 174 50 12 chrUextra 26628090 26628694 -2375962 + SAR_DM Satellite Satellite 224 850 -622 1 788 2194 104 15 32 chrUextra 26628802 26629397 -2375259 - DMSAT6 Satellite Satellite 0 585 1 1 788 4248 2 0 0 chrUextra 26629498 26629986 -2374670 + LSU-rRNA_Dme rRNA rRNA 2145 2632 -1268 1 788 932 0 9 9 chrUextra 26629986 26630102 -2374554 + R1_DM LINE R1 1 116 -5240 1 788 1260 6 22 17 chrUextra 26630202 26630381 -2374275 + NTS_DM Other Other 61 240 0 1 788 1847 4 17 13 chrUextra 26630381 26630620 -2374036 + NTS_DM Other Other 1 240 0 1 788 1279 12 0 18 chrUextra 26630620 26630785 -2373871 + NTS_DM Other Other 1 162 -78 1 788 5171 0 3 3 chrUextra 26630906 26631510 -2373146 + SSU-rRNA_Dme rRNA rRNA 1131 1734 -261 1 788 3497 21 2 0 chrUextra 26631610 26632035 -2372621 + R1_DM LINE R1 4641 5066 -290 1 788 904 53 0 0 chrUextra 26632032 26632146 -2372510 + R1_DM LINE R1 5243 5356 0 1 788 251 30 0 0 chrUextra 26632181 26632214 -2372442 + R1_DM LINE R1 3 35 -5321 1 788 1100 53 0 7 chrUextra 26632314 26632467 -2372189 + (GAGAA)n Simple_repeat Simple_repeat 2 153 0 1 788 3805 113 45 0 chrUextra 26633018 26633622 -2371034 - HETA LINE telomeric -3010 3071 2441 1 788 2333 93 12 21 chrUextra 26633744 26634326 -2370330 - DMSAT6 Satellite Satellite 0 576 1 1 788 5262 0 2 0 chrUextra 26634426 26635030 -2369626 + LSU-rRNA_Dme rRNA rRNA 2670 3274 -626 1 788 1997 19 11 8 chrUextra 26635130 26635394 -2369262 + ACCORD2_I LTR Gypsy 1103 1367 -5845 1 788 1001 42 235 23 chrUextra 26635475 26635696 -2368960 + ACCORD2_I LTR Gypsy 1507 1774 -5438 1 788 312 67 0 0 chrUextra 26635689 26635734 -2368922 + ACCORD2_I LTR Gypsy 7122 7166 -46 1 788 180 0 0 0 chrUextra 26636555 26636575 -2368081 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1 788 2118 111 5 102 chrUextra 26637946 26638535 -2366121 - DMSAT6 Satellite Satellite -28 531 1 1 788 23 0 0 0 chrUextra 26640150 26640173 -2364483 + AT_rich Low_complexity Low_complexity 1 23 0 1 788 208 281 10 0 chrUextra 26640335 26640431 -2364225 + T-rich Low_complexity Low_complexity 2 98 0 1 788 5274 0 2 0 chrUextra 26640762 26641366 -2363290 - LSU-rRNA_Dme rRNA rRNA -713 3187 2583 1 788 2780 131 93 51 chrUextra 26641500 26642070 -2362586 - STALKER4_I LTR Gypsy -4336 2194 1601 1 788 2024 174 80 33 chrUextra 26642170 26642772 -2361884 - SAR_DM Satellite Satellite -315 1157 528 1 788 1302 49 11 0 chrUextra 26642877 26643060 -2361596 + TART LINE telomeric 10478 10662 -3815 1 788 220 27 54 0 chrUextra 26643091 26643128 -2361528 + (TAAAA)n Simple_repeat Simple_repeat 1 39 0 1 788 962 159 42 54 chrUextra 26643139 26643472 -2361184 + HETA LINE telomeric 19 347 -5734 1 788 2337 107 15 61 chrUextra 26643579 26644182 -2360474 - DMSAT6 Satellite Satellite -4 575 1 1 788 2747 165 8 18 chrUextra 26644284 26644882 -2359774 + SAR_DM Satellite Satellite 346 937 -535 1 788 2551 82 21 16 chrUextra 26645693 26646270 -2358386 + DMSAT6 Satellite Satellite 1 580 -35 1 788 2564 157 27 17 chrUextra 26646408 26646992 -2357664 + SAR_DM Satellite Satellite 369 958 -514 1 788 5118 5 0 3 chrUextra 26647098 26647702 -2356954 - ROO_I LTR Pao -2489 5767 5166 1 788 4857 18 17 3 chrUextra 26647802 26648406 -2356250 + R1_DM LINE R1 1745 2356 -3000 1 788 1620 23 0 2 chrUextra 26648506 26649110 -2355546 + (CTATT)n Simple_repeat Simple_repeat 1 602 0 1 788 2848 159 8 7 chrUextra 26649210 26649799 -2354857 + SAR_DM Satellite Satellite 348 937 -535 1 788 1014 51 0 0 chrUextra 26649676 26649814 -2354842 - ARS406_DM Unknown Unknown -164 189 52 1 788 2509 188 8 5 chrUextra 26649914 26650509 -2354147 - SAR_DM Satellite Satellite -684 788 192 1 788 2336 89 10 45 chrUextra 26650618 26651222 -2353434 - DMSAT6 Satellite Satellite -96 582 1 1 788 799 325 40 35 chrUextra 26651322 26651867 -2352789 + HMSBEAGLE_I LTR Gypsy 4106 4653 -1876 1 788 2463 180 9 10 chrUextra 26652026 26652604 -2352052 + SAR_DM Satellite Satellite 500 1076 -396 1 788 238 183 0 16 chrUextra 26652569 26652630 -2352026 - XDMR_DM Unknown Unknown 0 360 301 1 788 691 81 0 0 chrUextra 26652732 26652831 -2351825 + ARS406_DM Unknown Unknown 91 189 -164 1 788 2604 158 12 9 chrUextra 26652750 26653318 -2351338 - SAR_DM Satellite Satellite -577 895 326 1 788 1089 37 0 0 chrUextra 26653434 26653569 -2351087 - R2_DM LINE R2 -379 3228 3094 1 788 2262 30 47 0 chrUextra 26653584 26653882 -2350774 + G2_DM LINE Jockey 2778 3089 -13 1 788 1093 76 6 0 chrUextra 26653881 26654038 -2350618 - R2_DM LINE R2 -1267 2340 2183 1 788 2274 174 15 32 chrUextra 26654143 26654742 -2349914 - SAR_DM Satellite Satellite -361 1111 523 1 788 2434 188 13 12 chrUextra 26654847 26655446 -2349210 - SAR_DM Satellite Satellite -577 895 296 1 788 2681 171 12 10 chrUextra 26655546 26656149 -2348507 + SAR_DM Satellite Satellite 430 1033 -439 1 788 953 118 6 0 chrUextra 26656250 26656428 -2348228 + (CTATT)n Simple_repeat Simple_repeat 1 179 0 1 788 1252 60 3 48 chrUextra 26656466 26656836 -2347820 + (CTATT)n Simple_repeat Simple_repeat 1 353 0 1 788 2471 180 48 5 chrUextra 26656972 26657552 -2347104 + SAR_DM Satellite Satellite 333 937 -535 1 788 1171 201 17 3 chrUextra 26657658 26657958 -2346698 - SAR_DM Satellite Satellite -684 788 485 1 788 2510 3 0 3 chrUextra 26657962 26658262 -2346394 - DM176_LTR LTR Gypsy 0 507 209 1 788 4128 30 75 2 chrUextra 26658362 26658958 -2345698 + R1_DM LINE R1 2367 3006 -2350 1 788 2629 182 8 8 chrUextra 26659070 26659668 -2344988 + SAR_DM Satellite Satellite 425 1022 -450 1 788 2068 182 13 8 chrUextra 26659773 26660371 -2344285 + SAR_DM Satellite Satellite 1 600 -1037 1 788 4902 28 3 0 chrUextra 26660472 26661074 -2343582 - R1_DM LINE R1 -3312 2044 1441 1 788 2022 4 0 0 chrUextra 26661174 26661418 -2343238 + ROVER-I_DM LTR Gypsy 6341 6584 0 1 788 2934 0 0 25 chrUextra 26661418 26661777 -2342879 + ROVER-LTR_DM LTR Gypsy 1 350 -17 1 788 2486 188 27 5 chrUextra 26661880 26662480 -2342176 - SAR_DM Satellite Satellite -582 890 278 1 788 2585 167 88 7 chrUextra 26663986 26664589 -2340067 - SAR_DM Satellite Satellite -444 1028 377 1 788 2714 179 13 3 chrUextra 26664692 26665290 -2339366 - SAR_DM Satellite Satellite -642 830 227 1 788 1224 0 0 0 chrUextra 26665396 26665532 -2339124 + (GAGAA)n Simple_repeat Simple_repeat 1 136 0 1 788 4432 20 7 5 chrUextra 26666095 26666698 -2337958 + STALKER4_I LTR Gypsy 5886 6489 -41 1 788 908 61 3 19 chrUextra 26666829 26667401 -2337255 + RSP Satellite Satellite 1 563 0 1 788 3230 77 70 27 chrUextra 26667505 26668104 -2336552 + STALKER4_I LTR Gypsy 824 1448 -5082 1 788 2549 176 40 7 chrUextra 26668204 26668806 -2335850 - SAR_DM Satellite Satellite -550 922 301 1 788 2201 113 23 48 chrUextra 26668907 26669510 -2335146 + DMSAT6 Satellite Satellite 1 587 -3 1 788 906 42 0 0 chrUextra 26669610 26669729 -2334927 + (TCTTG)n Simple_repeat Simple_repeat 2 120 0 1 788 2387 145 10 1 chrUextra 26670376 26670916 -2333740 + Gypsy2_I LTR Gypsy 1713 2709 -4303 1 788 1651 18 18 18 chrUextra 26671016 26671245 -2333411 + NTS_DM Other Other 12 240 0 1 788 1734 21 17 17 chrUextra 26671245 26671485 -2333171 + NTS_DM Other Other 1 240 0 1 788 1136 8 0 0 chrUextra 26671485 26671619 -2333037 + NTS_DM Other Other 1 134 -106 1 788 2445 71 28 40 chrUextra 26671721 26672321 -2332335 + DMSAT6 Satellite Satellite 1 592 -97 1 788 2632 171 17 10 chrUextra 26673125 26673723 -2330933 - SAR_DM Satellite Satellite -641 831 230 1 788 4418 20 7 11 chrUextra 26673856 26674421 -2330235 - BATUMI_I LTR Pao -962 7001 6439 1 788 4902 25 3 2 chrUextra 26674531 26675133 -2329523 + IDEFIX_I LTR Gypsy 1592 2194 -3434 1 788 2723 169 10 10 chrUextra 26675234 26675837 -2328819 - SAR_DM Satellite Satellite -470 1002 400 1 788 1684 68 416 5 chrUextra 26675937 26676367 -2328289 + PROTOP_B DNA P 249 856 -297 1 788 1211 68 0 0 chrUextra 26676375 26676538 -2328118 - Jockey2 LINE Jockey -1608 1820 1658 1 788 4798 20 0 0 chrUextra 26677343 26677946 -2326710 - QUASIMODO_I LTR Gypsy -4622 1438 836 1 788 1290 129 36 88 chrUextra 26678046 26678351 -2326305 + TART LINE telomeric 3074 3362 -11115 1 788 1672 136 20 30 chrUextra 26678346 26678649 -2326007 + TART LINE telomeric 3683 3982 -10495 1 788 662 178 34 39 chrUextra 26678758 26678963 -2325693 + DNAREP1_DM LINE Penelope 86 289 -305 1 788 754 154 34 16 chrUextra 26678963 26679191 -2325465 + DNAREP1_DM LINE Penelope 143 332 -262 1 788 370 204 38 19 chrUextra 26679247 26679352 -2325304 - DNAREP1_DM LINE Penelope -303 291 185 1 788 4960 22 0 0 chrUextra 26679452 26680055 -2324601 + R1_DM LINE R1 2492 3094 -2262 1 788 5097 15 0 0 chrUextra 26680155 26680758 -2323898 - STALKER4_I LTR Gypsy -2309 4221 3619 1 788 4085 48 81 5 chrUextra 26680858 26681461 -2323195 + PROTOP DNA P 9 657 -3823 1 788 1637 15 0 5 chrUextra 26681565 26681772 -2322884 - NTS_DM Other Other -34 206 1 1 788 1421 20 20 20 chrUextra 26681772 26681975 -2322681 - NTS_DM Other Other 0 240 38 1 788 870 9 0 27 chrUextra 26681975 26682087 -2322569 - NTS_DM Other Other -107 133 25 1 788 21 36 0 0 chrUextra 26682113 26682141 -2322515 + AT_rich Low_complexity Low_complexity 1 28 0 1 788 1640 5 16 0 chrUextra 26682264 26682458 -2322198 - Invader1_LTR LTR Gypsy -226 197 1 1 788 3366 5 5 2 chrUextra 26682458 26682867 -2321789 - Invader1_I LTR Gypsy 0 3186 2777 1 788 621 339 40 26 chrUextra 26683706 26684160 -2320496 + NINJA_I LTR Pao 4839 5298 -713 1 788 479 122 100 0 chrUextra 26684713 26684803 -2319853 + DNAREP1_DM LINE Penelope 496 594 0 1 788 34 24 0 0 chrUextra 26684859 26684900 -2319756 + AT_rich Low_complexity Low_complexity 1 41 0 1 788 355 0 62 62 chrUextra 26685779 26685843 -2318813 + NTS_DM Other Other 177 240 0 1 788 1861 0 17 13 chrUextra 26685843 26686082 -2318574 + NTS_DM Other Other 1 240 0 1 788 1750 13 21 17 chrUextra 26686082 26686321 -2318335 + NTS_DM Other Other 1 240 0 1 788 539 0 0 0 chrUextra 26686321 26686382 -2318274 + NTS_DM Other Other 1 61 -179 1 788 1342 23 0 6 chrUextra 26686482 26686657 -2317999 - NTS_DM Other Other -66 174 1 1 788 1710 25 17 17 chrUextra 26686657 26686897 -2317759 - NTS_DM Other Other 0 240 1 1 788 1280 16 21 21 chrUextra 26686897 26687085 -2317571 - NTS_DM Other Other 0 240 53 1 788 3845 25 0 128 chrUextra 26687185 26687788 -2316868 + CIRCE LINE Composite 1657 2182 -4174 1 788 303 0 0 71 chrUextra 26687888 26687930 -2316726 - NTS_DM Other Other -177 63 25 1 788 1252 18 0 6 chrUextra 26687982 26688147 -2316509 - NTS_DM Other Other -39 201 38 1 788 840 9 0 35 chrUextra 26688147 26688260 -2316396 - NTS_DM Other Other -107 133 25 1 788 1168 25 6 12 chrUextra 26688312 26688477 -2316179 - NTS_DM Other Other -39 201 38 1 788 3802 10 151 0 chrUextra 26688591 26689194 -2315462 - DMRT1B LINE R1 -866 4317 3624 1 788 445 31 0 0 chrUextra 26689997 26690061 -2314595 + NTS_DM Other Other 113 176 -64 1 788 4741 2 0 0 chrUextra 26690058 26690600 -2314056 + G2_DM LINE Jockey 144 685 -2417 1 788 2438 195 7 12 chrUextra 26690702 26691303 -2313353 - SAR_DM Satellite Satellite -1093 597 1 1 788 552 15 0 0 chrUextra 26691941 26692006 -2312650 + (TTCTC)n Simple_repeat Simple_repeat 2 66 0 1 788 1896 172 3 8 chrUextra 26692106 26692165 -2312491 + SAR_DM Satellite Satellite 1 71 -1068 1 788 854 36 0 0 chrUextra 26692165 26692277 -2312379 - ARS406_DM Unknown Unknown -164 189 78 1 788 1896 172 3 8 chrUextra 26692277 26692703 -2311953 + SAR_DM Satellite Satellite 72 594 -545 1 788 618 0 0 0 chrUextra 26693512 26693582 -2311074 - NTS_DM Other Other -170 70 1 1 788 1847 4 17 13 chrUextra 26693582 26693821 -2310835 - NTS_DM Other Other 0 240 1 1 788 1824 0 21 13 chrUextra 26693821 26694059 -2310597 - NTS_DM Other Other 0 240 1 1 788 318 0 71 54 chrUextra 26694059 26694115 -2310541 - NTS_DM Other Other 0 240 184 1 788 1749 192 70 22 chrUextra 26694216 26694818 -2309838 - SAR_DM Satellite Satellite -879 630 1 1 788 5202 0 0 3 chrUextra 26694918 26695521 -2309135 + SSU-rRNA_Dme rRNA rRNA 549 1149 -846 1 788 880 63 5 18 chrUextra 26695621 26696224 -2308432 + RSP Satellite Satellite 1 595 0 1 788 2340 167 10 10 chrUextra 26696327 26696913 -2307743 - SAR_DM Satellite Satellite -581 586 1 1 788 2431 0 3 0 chrUextra 26697026 26697309 -2307347 - DM1731_I LTR Copia -3692 284 1 1 788 2576 31 0 0 chrUextra 26697309 26697628 -2307028 - DM1731_LTR LTR Copia 0 336 18 1 788 2497 64 90 6 chrUextra 26697728 26698193 -2306463 - TRANSIB2 DNA Transib -2333 511 8 1 788 761 108 131 0 chrUextra 26698200 26698330 -2306326 - MICROPIA_I LTR Gypsy -1027 3449 3303 1 788 1322 12 0 0 chrUextra 26698430 26698591 -2306065 - NTS_DM Other Other -79 161 1 1 788 1861 0 17 13 chrUextra 26698591 26698830 -2305826 - NTS_DM Other Other 0 240 1 1 788 1502 0 25 15 chrUextra 26698830 26699032 -2305624 - NTS_DM Other Other 0 240 37 1 788 435 38 0 0 chrUextra 26699136 26699189 -2305467 + (TTCTC)n Simple_repeat Simple_repeat 3 55 0 1 788 3610 5 0 0 chrUextra 26699834 26700252 -2304404 + QUASIMODO_LTR LTR Gypsy 241 658 0 1 788 1539 11 22 0 chrUextra 26700252 26700436 -2304220 + QUASIMODO_I LTR Gypsy 1 188 -5872 1 788 4522 2 0 0 chrUextra 26700536 26701056 -2303600 + LSU-rRNA_Dme rRNA rRNA 2113 2632 -1268 1 788 649 0 24 0 chrUextra 26701056 26701138 -2303518 + R1_DM LINE R1 1 84 -5272 1 788 4503 6 108 5 chrUextra 26701238 26701840 -2302816 - SSU-rRNA_Dme rRNA rRNA -495 1500 837 1 788 2057 102 10 89 chrUextra 26701940 26702536 -2302120 + DMSAT6 Satellite Satellite 1 549 -74 1 788 2433 104 24 3 chrUextra 26703353 26703944 -2300712 + DMSAT6 Satellite Satellite 1 602 -3 1 788 2296 90 37 13 chrUextra 26704046 26704644 -2300012 - DMSAT6 Satellite Satellite -11 611 1 1 788 2760 0 6 0 chrUextra 26704748 26705075 -2299581 - Stalker2_LTR LTR Gypsy -95 329 1 1 788 1705 12 19 34 chrUextra 26705075 26705342 -2299314 - Stalker2_I LTR Gypsy 0 7402 7140 1 788 756 0 0 0 chrUextra 26705450 26705534 -2299122 + (TTGTG)n Simple_repeat Simple_repeat 2 85 0 1 788 1192 7 0 0 chrUextra 26706152 26706294 -2298362 - NTS_DM Other Other -98 142 1 1 788 1531 0 20 15 chrUextra 26706294 26706496 -2298160 - NTS_DM Other Other 0 240 38 1 788 1062 8 0 15 chrUextra 26706496 26706631 -2298025 - NTS_DM Other Other -107 133 1 1 788 712 42 32 32 chrUextra 26706631 26706754 -2297902 - NTS_DM Other Other 0 240 118 1 788 510 171 0 9 chrUextra 26706854 26706966 -2297690 - ARS406_DM Unknown Unknown -242 111 1 1 788 2287 186 29 10 chrUextra 26706868 26707456 -2297200 + SAR_DM Satellite Satellite 191 789 -683 1 788 2684 174 12 7 chrUextra 26707556 26708158 -2296498 + SAR_DM Satellite Satellite 256 860 -612 1 788 4415 18 75 0 chrUextra 26708258 26708860 -2295796 - DMRT1B LINE R1 -2011 3172 2526 1 788 4713 25 18 0 chrUextra 26708960 26709562 -2295094 + STALKER4_I LTR Gypsy 2330 2942 -3588 1 788 5050 2 2 7 chrUextra 26709662 26710264 -2294392 - LSU-rRNA_Dme rRNA rRNA -2519 1381 783 1 788 577 142 59 6 chrUextra 26710370 26710540 -2294116 + GA-rich Low_complexity Low_complexity 1 179 0 1 788 513 7 136 0 chrUextra 26710528 26710682 -2293974 + (GA)n Simple_repeat Simple_repeat 2 176 0 1 788 2722 176 10 5 chrUextra 26711067 26711668 -2292988 + SAR_DM Satellite Satellite 267 870 -602 1 788 336 48 0 0 chrUextra 26711768 26711810 -2292846 + (TTCTC)n Simple_repeat Simple_repeat 3 44 0 1 788 2562 179 15 13 chrUextra 26712470 26713072 -2291584 + SAR_DM Satellite Satellite 267 869 -603 1 788 870 9 0 27 chrUextra 26713197 26713309 -2291347 - NTS_DM Other Other -107 133 25 1 788 1252 18 0 6 chrUextra 26713362 26713527 -2291129 - NTS_DM Other Other -39 201 38 1 788 870 9 0 27 chrUextra 26713527 26713639 -2291017 - NTS_DM Other Other -107 133 25 1 788 519 36 0 12 chrUextra 26713691 26713774 -2290882 - NTS_DM Other Other -39 201 120 1 788 426 20 0 0 chrUextra 26713881 26713931 -2290725 - LSU-rRNA_Dme rRNA rRNA -1211 2689 2640 1 788 4729 0 0 2 chrUextra 26713929 26714476 -2290180 - R1_DM LINE R1 0 5356 4811 1 788 2696 165 18 10 chrUextra 26714576 26715177 -2289479 - SAR_DM Satellite Satellite -515 957 352 1 788 633 93 0 0 chrUextra 26715278 26715385 -2289271 + (TCTTG)n Simple_repeat Simple_repeat 4 110 0 1 788 1158 122 0 0 chrUextra 26715980 26716204 -2288452 + (TA)n Simple_repeat Simple_repeat 1 224 0 1 788 4882 30 3 2 chrUextra 26716682 26717284 -2287372 - DIVER_I LTR Pao -95 5548 4946 1 788 2153 102 18 22 chrUextra 26717385 26717986 -2286670 - DMSAT6 Satellite Satellite -110 598 1 1 788 1416 187 15 3 chrUextra 26718099 26718687 -2285969 - SAR_DM Satellite Satellite -750 594 1 1 788 214 0 0 157 chrUextra 26719493 26719595 -2285061 + (CAAGA)n Simple_repeat Simple_repeat 2 87 0 1 788 662 200 6 19 chrUextra 26720403 26720561 -2284095 + HETRP_DM Satellite Satellite 1529 1684 -188 1 788 505 204 0 9 chrUextra 26720685 26720794 -2283862 + HETRP_DM Satellite Satellite 1529 1636 -236 1 788 2352 30 0 10 chrUextra 26720894 26721194 -2283462 - DM1731_LTR LTR Copia -39 297 1 1 788 2301 20 10 20 chrUextra 26721194 26721496 -2283160 - DM1731_I LTR Copia 0 3976 3678 1 788 2426 182 9 11 chrUextra 26721600 26722171 -2282485 + SAR_DM Satellite Satellite 507 1076 -396 1 788 5078 2 0 2 chrUextra 26722298 26722900 -2281756 + ROO_I LTR Pao 4837 5437 -2819 1 788 4254 19 0 4 chrUextra 26723001 26723517 -2281139 - PROTOP_A DNA P -591 514 1 1 788 4304 4 0 0 chrUextra 26723702 26724199 -2280457 - ROO_I LTR Pao -683 7573 7077 1 788 986 0 0 0 chrUextra 26724185 26724304 -2280352 - ROO_I LTR Pao -3752 4504 4386 1 788 2750 178 7 3 chrUextra 26724408 26725006 -2279650 + SAR_DM Satellite Satellite 246 845 -627 1 788 746 25 32 32 chrUextra 26725106 26725230 -2279426 + NTS_DM Other Other 117 240 0 1 788 1734 21 17 17 chrUextra 26725230 26725470 -2279186 + NTS_DM Other Other 1 240 0 1 788 1765 4 17 21 chrUextra 26725470 26725708 -2278948 + NTS_DM Other Other 1 237 -3 1 788 5121 0 0 3 chrUextra 26725808 26726410 -2278246 - R1_DM LINE R1 -2029 3327 2728 1 788 2218 122 12 15 chrUextra 26726511 26727104 -2277552 + DMSAT6 Satellite Satellite 1 591 -74 1 788 4962 8 0 2 chrUextra 26727212 26727813 -2276843 - ROO_I LTR Pao -4630 3626 3027 1 788 2011 188 8 14 chrUextra 26727913 26728405 -2276251 + SAR_DM Satellite Satellite 588 1076 -396 1 788 525 122 61 0 chrUextra 26728416 26728514 -2276142 + SAR_DM Satellite Satellite 543 646 -826 1 788 2828 174 5 5 chrUextra 26728614 26729215 -2275441 - SAR_DM Satellite Satellite -616 856 256 1 788 892 65 3 18 chrUextra 26729315 26729916 -2274740 - RSP Satellite Satellite -59 592 1 1 788 912 26 0 0 chrUextra 26730021 26730138 -2274518 - NTS_DM Other Other -86 154 38 1 788 870 9 0 27 chrUextra 26730138 26730250 -2274406 - NTS_DM Other Other -107 133 25 1 788 22 56 0 0 chrUextra 26730276 26730312 -2274344 + AT_rich Low_complexity Low_complexity 1 36 0 1 788 255 125 0 0 chrUextra 26730325 26730365 -2274291 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 788 246 150 0 0 chrUextra 26730408 26730448 -2274208 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 788 246 150 0 0 chrUextra 26730500 26730540 -2274116 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2581 1 788 525 71 0 0 chrUextra 26731248 26731318 -2273338 + (GAGAA)n Simple_repeat Simple_repeat 5 74 0 1 788 3010 258 11 29 chrUextra 26731418 26732554 -2272102 - SAR_DM Satellite Satellite -357 1277 61 1 788 822 54 0 0 chrUextra 26732554 26732666 -2271990 + ARS406_DM Unknown Unknown 78 189 -164 1 788 3010 258 11 29 chrUextra 26732666 26732720 -2271936 - SAR_DM Satellite Satellite -357 60 1 1 788 583 136 0 18 chrUextra 26732820 26732932 -2271724 + SAR_DM Satellite Satellite 794 903 -569 1 788 796 30 0 0 chrUextra 26732842 26732942 -2271714 - ARS406_DM Unknown Unknown -164 189 90 1 788 1987 183 5 7 chrUextra 26732947 26733393 -2271263 + SAR_DM Satellite Satellite 496 940 -532 1 788 383 68 17 0 chrUextra 26733528 26733587 -2271069 + (TAA)n Simple_repeat Simple_repeat 3 62 0 1 788 1843 105 10 3 chrUextra 26733599 26733887 -2270769 + MDG1_LTR LTR Gypsy 123 412 -30 1 788 1635 43 17 13 chrUextra 26733888 26734122 -2270534 + DMCR1A LINE CR1 1 235 -4235 1 788 2714 160 17 13 chrUextra 26734223 26734823 -2269833 + SAR_DM Satellite Satellite 370 971 -501 1 788 2456 117 25 25 chrUextra 26734924 26735524 -2269132 - DMSAT6 Satellite Satellite -30 600 1 1 788 5015 20 0 0 chrUextra 26735624 26736225 -2268431 - DMRT1B LINE R1 -2718 2465 1865 1 788 4819 22 3 0 chrUextra 26736325 26736926 -2267730 + G_DM LINE Jockey 3295 3897 -449 1 788 2594 169 28 5 chrUextra 26737036 26737612 -2267044 - SAR_DM Satellite Satellite -535 937 349 1 788 2486 82 12 25 chrUextra 26737727 26738325 -2266331 + DMSAT6 Satellite Satellite 1 589 -74 1 98 1363 258 19 78 chrUextra 26738431 26739007 -2265649 + Gypsy12_LTR LTR Gypsy 355 896 -1440 1 789 2295 98 7 52 chrUextra 26739830 26740431 -2264225 + DMSAT6 Satellite Satellite 1 573 -100 1 789 2703 174 10 7 chrUextra 26740531 26741132 -2263524 + SAR_DM Satellite Satellite 415 1017 -455 1 789 4007 2 0 2 chrUextra 26742074 26742534 -2262122 + SSU-rRNA_Dme rRNA rRNA 1 459 -1536 1 789 4437 2 3 77 chrUextra 26742634 26743235 -2261421 - LSU-rRNA_Dme rRNA rRNA -1824 2076 1520 1 789 5245 0 3 0 chrUextra 26743335 26743936 -2260720 + LSU-rRNA_Dme rRNA rRNA 3070 3672 -228 1 789 3960 11 6 10 chrUextra 26744037 26744519 -2260137 + DM1731_I LTR Copia 3497 3976 0 1 789 841 44 0 34 chrUextra 26744519 26744637 -2260019 + DM1731_LTR LTR Copia 29 142 -194 1 789 972 0 0 0 chrUextra 26744737 26744845 -2259811 + (CATCT)n Simple_repeat Simple_repeat 1 108 0 1 789 1491 28 0 0 chrUextra 26744847 26745027 -2259629 + (CATGT)n Simple_repeat Simple_repeat 1 180 0 1 789 585 0 0 0 chrUextra 26745027 26745092 -2259564 + (CATCT)n Simple_repeat Simple_repeat 1 65 0 1 789 1224 53 0 0 chrUextra 26745092 26745338 -2259318 + (CATGT)n Simple_repeat Simple_repeat 1 246 0 1 789 2519 173 10 13 chrUextra 26745438 26746037 -2258619 - SAR_DM Satellite Satellite -671 801 205 1 789 5211 2 2 0 chrUextra 26746139 26746740 -2257916 - LSU-rRNA_Dme rRNA rRNA -1470 2430 1829 1 789 2637 168 15 10 chrUextra 26746840 26747441 -2257215 - SAR_DM Satellite Satellite -496 976 373 1 789 1116 0 0 0 chrUextra 26748242 26748366 -2256290 + (CACAA)n Simple_repeat Simple_repeat 3 126 0 1 789 3420 5 0 2 chrUextra 26748370 26748773 -2255883 - STALKER4_LTR LTR Gypsy 0 402 1 1 789 580 0 0 0 chrUextra 26748773 26748843 -2255813 - STALKER4_I LTR Gypsy 0 6530 6461 1 789 2773 166 7 7 chrUextra 26748946 26749536 -2255120 + SAR_DM Satellite Satellite 369 958 -514 1 789 246 150 0 0 chrUextra 26749727 26749767 -2254889 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 789 225 125 0 24 chrUextra 26749810 26749851 -2254805 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 789 22 56 0 0 chrUextra 26749864 26749900 -2254756 + AT_rich Low_complexity Low_complexity 1 36 0 1 789 848 18 0 27 chrUextra 26749926 26750038 -2254618 + NTS_DM Other Other 25 133 -107 1 789 1182 30 0 12 chrUextra 26750038 26750204 -2254452 + NTS_DM Other Other 38 201 -39 1 789 2514 174 12 14 chrUextra 26750348 26750938 -2253718 - SAR_DM Satellite Satellite -425 1047 459 1 789 1608 179 32 12 chrUextra 26751046 26751647 -2253009 + SAR_DM Satellite Satellite 1 613 -426 1 789 2675 175 8 10 chrUextra 26751747 26752348 -2252308 + SAR_DM Satellite Satellite 438 1037 -435 1 789 3207 48 24 0 chrUextra 26752449 26752869 -2251787 + TART_B1 LINE telomeric 3199 3628 -7026 1 789 1331 88 0 0 chrUextra 26752867 26753049 -2251607 + TART_B1 LINE telomeric 4415 4596 -6058 1 789 5029 2 0 0 chrUextra 26753149 26753750 -2250906 - LSU-rRNA_Dme rRNA rRNA -2956 944 344 1 789 2479 166 18 20 chrUextra 26753850 26754451 -2250205 - SAR_DM Satellite Satellite -673 799 200 1 789 2099 47 0 4 chrUextra 26755252 26755533 -2249123 - HETA LINE telomeric -2473 3608 3329 1 789 2433 28 6 3 chrUextra 26755535 26755853 -2248803 + NINJA_I LTR Pao 5579 5897 -114 1 789 1107 0 0 0 chrUextra 26755960 26756083 -2248573 + (CAGAT)n Simple_repeat Simple_repeat 5 127 0 1 789 1467 28 0 0 chrUextra 26756085 26756265 -2248391 + (ATAAG)n Simple_repeat Simple_repeat 1 180 0 1 789 555 148 0 0 chrUextra 26756265 26756400 -2248256 + (CTAAG)n Simple_repeat Simple_repeat 1 135 0 1 789 633 184 0 0 chrUextra 26756372 26756535 -2248121 + A-rich Low_complexity Low_complexity 4 166 0 1 789 1587 14 0 0 chrUextra 26756656 26756936 -2247720 + (GAGAA)n Simple_repeat Simple_repeat 1 280 0 1 789 5149 3 2 0 chrUextra 26758054 26758654 -2246002 - R1_DM LINE R1 -2973 2383 1783 1 789 32 0 0 0 chrUextra 26758888 26758920 -2245736 + AT_rich Low_complexity Low_complexity 1 32 0 1 789 2570 10 3 0 chrUextra 26759052 26759354 -2245302 + SSU-rRNA_Dme rRNA rRNA 1 303 -1692 1 789 5156 2 2 3 chrUextra 26759454 26760054 -2244602 + SSU-rRNA_Dme rRNA rRNA 750 1348 -647 1 789 2490 183 5 19 chrUextra 26760155 26760744 -2243912 + SAR_DM Satellite Satellite 539 1119 -353 1 789 1961 187 4 11 chrUextra 26760854 26761319 -2243337 - SAR_DM Satellite Satellite -515 957 496 1 789 657 53 53 0 chrUextra 26761324 26761419 -2243237 + ARS406_DM Unknown Unknown 90 189 -164 1 789 544 152 42 17 chrUextra 26761334 26761454 -2243202 - SAR_DM Satellite Satellite -569 903 781 1 789 5263 3 0 0 chrUextra 26761554 26762154 -2242502 - SSU-rRNA_Dme rRNA rRNA -1203 792 193 1 789 579 8 128 3 chrUextra 26762954 26763551 -2241105 + (TA)n Simple_repeat Simple_repeat 1 671 0 1 789 3400 76 17 24 chrUextra 26763654 26764254 -2240402 + PROTOP_A DNA P 481 1075 -78 1 789 5132 2 0 0 chrUextra 26764354 26764954 -2239702 - R1_DM LINE R1 -2192 3164 2565 1 789 2367 89 28 19 chrUextra 26765081 26765654 -2239002 - DMSAT6 Satellite Satellite 0 578 1 1 789 2650 170 12 8 chrUextra 26765754 26766341 -2238315 - SAR_DM Satellite Satellite -515 957 369 1 789 1149 13 0 0 chrUextra 26767154 26767313 -2237343 + DOC LINE Jockey 4567 4725 0 1 789 3759 2 0 0 chrUextra 26767314 26767754 -2236902 - Invader3_I LTR Gypsy -1798 3090 2651 1 789 2657 180 8 7 chrUextra 26767854 26768453 -2236203 + SAR_DM Satellite Satellite 253 852 -620 1 789 5149 3 0 0 chrUextra 26768554 26769154 -2235502 + R1_DM LINE R1 2918 3517 -1839 1 789 391 49 0 16 chrUextra 26769257 26769319 -2235337 + NTS_DM Other Other 141 201 -39 1 789 21 57 0 0 chrUextra 26769319 26769354 -2235302 + AT_rich Low_complexity Low_complexity 1 35 0 1 789 832 9 9 27 chrUextra 26769380 26769491 -2235165 + NTS_DM Other Other 25 133 -107 1 789 817 0 0 0 chrUextra 26769491 26769587 -2235069 + NTS_DM Other Other 38 133 -107 1 789 1408 20 20 20 chrUextra 26769587 26769790 -2234866 + NTS_DM Other Other 38 240 0 1 789 524 31 0 0 chrUextra 26769790 26769854 -2234802 + NTS_DM Other Other 1 64 -176 1 789 5096 5 0 2 chrUextra 26769954 26770554 -2234102 - R1_DM LINE R1 -2988 2368 1770 1 789 4262 11 2 2 chrUextra 26771354 26771874 -2232782 - R1_DM LINE R1 -4060 1296 777 1 789 626 25 0 0 chrUextra 26771873 26771953 -2232703 - R1_DM LINE R1 -4838 518 439 1 789 922 9 9 0 chrUextra 26772754 26772868 -2231788 - R1_DM LINE R1 -5240 116 2 1 789 455 36 0 0 chrUextra 26772870 26772925 -2231731 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2578 1 789 3761 0 0 2 chrUextra 26772921 26773354 -2231302 - R2_DM LINE R2 0 3607 3176 1 789 5138 5 0 0 chrUextra 26773454 26774054 -2230602 - R1_DM LINE R1 -251 5105 4506 1 789 2289 194 15 8 chrUextra 26774165 26774754 -2229902 - SAR_DM Satellite Satellite -416 1056 464 1 789 1118 149 9 39 chrUextra 26774855 26775086 -2229570 - Gypsy12_LTR LTR Gypsy -2112 224 1 1 789 2723 79 0 3 chrUextra 26775085 26775454 -2229202 - Gypsy12_I LTR Gypsy 0 5546 5179 1 789 1323 0 0 0 chrUextra 26775554 26775701 -2228955 + (GAGAA)n Simple_repeat Simple_repeat 4 150 0 1 789 180 0 0 0 chrUextra 26776254 26776274 -2228382 + (T)n Simple_repeat Simple_repeat 1 20 0 1 789 264 276 10 0 chrUextra 26776298 26776396 -2228260 + MAX_I LTR Pao 1066 1164 -6750 1 789 835 148 84 165 chrUextra 26776396 26776850 -2227806 + MAX_I LTR Pao 938 1354 -6560 1 789 1252 6 13 0 chrUextra 26776954 26777111 -2227545 - LSU-rRNA_Dme rRNA rRNA -2160 1740 1582 1 789 3800 2 2 5 chrUextra 26777107 26777554 -2227102 - LSU-rRNA_Dme rRNA rRNA -2420 1480 1035 1 789 4947 9 0 0 chrUextra 26777654 26778193 -2226463 - DOC LINE Jockey -4185 540 2 1 789 4516 58 2 20 chrUextra 26778354 26778954 -2225702 + R1_DM LINE R1 206 794 -4562 1 789 817 11 0 0 chrUextra 26779054 26779146 -2225510 - MAX_LTR LTR Pao -229 92 1 1 789 3988 48 0 0 chrUextra 26779155 26779654 -2225002 - MAX_I LTR Pao -2 7912 7414 1 789 5349 18 2 0 chrUextra 26779757 26780354 -2224302 + STALKER4_I LTR Gypsy 4048 4645 -1885 1 789 5337 13 0 2 chrUextra 26780454 26781054 -2223602 + STALKER4_I LTR Gypsy 4478 5076 -1454 1 789 471 35 0 0 chrUextra 26781697 26781754 -2222902 + (GAGAA)n Simple_repeat Simple_repeat 5 61 0 1 789 2701 77 10 27 chrUextra 26781860 26782450 -2222206 + DMSAT6 Satellite Satellite 1 579 -97 1 789 5560 2 2 2 chrUextra 26782554 26783154 -2221502 - SSU-rRNA_Dme rRNA rRNA -1241 754 155 1 789 698 304 52 49 chrUextra 26783254 26783846 -2220810 - SAR_DM Satellite Satellite -454 1018 425 1 789 590 328 18 8 chrUextra 26783957 26784284 -2220372 + Copia2_I LTR Copia 1746 2091 -2071 1 789 3880 103 68 0 chrUextra 26784654 26785254 -2219402 - TART_B1 LINE telomeric -7723 2931 2291 1 789 4417 64 7 13 chrUextra 26785354 26785954 -2218702 - BATUMI_I LTR Pao -4259 3704 3109 1 789 5451 5 0 0 chrUextra 26786054 26786654 -2218002 - R1_DM LINE R1 -78 5278 4679 1 789 3048 169 12 7 chrUextra 26787454 26788054 -2216602 + SAR_DM Satellite Satellite 260 862 -610 1 789 680 300 58 60 chrUextra 26788185 26788753 -2215903 - SAR_DM Satellite Satellite -449 1023 457 1 789 2500 110 17 24 chrUextra 26789555 26790132 -2214524 - DMSAT6 Satellite Satellite -67 573 1 1 789 430 182 46 35 chrUextra 26790254 26790452 -2214204 - HETA LINE telomeric -10285 178 1 1 789 658 58 23 0 chrUextra 26790465 26790541 -2214115 - HETA LINE telomeric -5 6076 5999 1 789 2626 32 35 0 chrUextra 26790541 26790854 -2213802 + DM1731_LTR LTR Copia 1 324 -12 1 789 5178 18 3 0 chrUextra 26790954 26791554 -2213102 - STALKER4_I LTR Gypsy -3396 3134 2533 1 789 2989 161 9 9 chrUextra 26791667 26792245 -2212411 + SAR_DM Satellite Satellite 326 903 -569 1 789 306 245 119 0 chrUextra 26792367 26792495 -2212161 + HETA LINE telomeric 4491 4567 -1514 1 789 1268 244 42 28 chrUextra 26792526 26792951 -2211705 + G_DM LINE Jockey 421 851 -3495 1 789 584 0 49 37 chrUextra 26793052 26793134 -2211522 + NTS_DM Other Other 158 240 0 1 789 1341 6 0 30 chrUextra 26793134 26793301 -2211355 + NTS_DM Other Other 1 162 -78 1 789 534 119 36 0 chrUextra 26793411 26793495 -2211161 + NTS_DM Other Other 4 90 -150 1 789 2162 135 20 14 chrUextra 26793751 26794348 -2210308 - DMSAT6 Satellite Satellite -365 601 1 1 789 2212 28 12 0 chrUextra 26794794 26795049 -2209607 - PROTOP DNA P 0 4480 4223 1 789 2015 38 188 7 chrUextra 26795149 26795441 -2209215 - DOC2_DM LINE Jockey -4442 351 7 1 789 1600 143 13 13 chrUextra 26795450 26795748 -2208908 + SAR_DM Satellite Satellite 740 1037 -435 1 789 1128 172 19 9 chrUextra 26795848 26796116 -2208540 - HETA LINE telomeric -1422 4659 4464 1 789 2544 70 3 3 chrUextra 26796074 26796447 -2208209 - G6_DM LINE Jockey 0 2042 1739 1 789 2529 192 10 22 chrUextra 26796555 26797146 -2207510 + SAR_DM Satellite Satellite 536 1119 -353 1 789 6255 242 56 65 chrUextra 26797246 26799243 -2205413 + STALKER4_I LTR Gypsy 392 2485 -4045 1 789 2458 191 55 5 chrUextra 26799363 26799941 -2204715 + SAR_DM Satellite Satellite 373 979 -493 1 789 534 119 36 0 chrUextra 26800132 26800216 -2204440 + NTS_DM Other Other 4 90 -150 1 789 28 48 0 0 chrUextra 26800490 26800532 -2204124 + AT_rich Low_complexity Low_complexity 1 42 0 1 789 5016 24 2 7 chrUextra 26800741 26801340 -2203316 + R1_DM LINE R1 3387 3982 -1374 1 789 2681 185 13 12 chrUextra 26802139 26802735 -2201921 - SAR_DM Satellite Satellite -684 788 192 1 789 3020 164 19 7 chrUextra 26802838 26803423 -2201233 - SAR_DM Satellite Satellite -549 923 332 1 789 21 36 0 0 chrUextra 26803539 26803567 -2201089 + AT_rich Low_complexity Low_complexity 1 28 0 1 789 876 9 0 44 chrUextra 26803593 26803707 -2200949 + NTS_DM Other Other 25 133 -107 1 789 1350 18 0 6 chrUextra 26803707 26803872 -2200784 + NTS_DM Other Other 38 201 -39 1 789 21 57 0 0 chrUextra 26803872 26803907 -2200749 + AT_rich Low_complexity Low_complexity 1 35 0 1 789 898 9 9 27 chrUextra 26803933 26804044 -2200612 + NTS_DM Other Other 25 133 -107 1 789 844 0 0 0 chrUextra 26804044 26804136 -2200520 + NTS_DM Other Other 38 129 -111 1 789 4966 37 5 3 chrUextra 26804236 26804835 -2199821 - R1_DM LINE R1 -182 5174 4575 1 789 4935 12 0 0 chrUextra 26804935 26805534 -2199122 + DM176_I LTR Gypsy 5642 6240 -180 1 789 3013 175 5 5 chrUextra 26806340 26806932 -2197724 + SAR_DM Satellite Satellite 278 869 -603 1 789 2489 91 19 35 chrUextra 26807032 26807623 -2197033 - DMSAT6 Satellite Satellite -71 581 1 1 789 4163 100 47 0 chrUextra 26807731 26808330 -2196326 - TART_B1 LINE telomeric -7618 3036 2410 1 789 1938 8 17 17 chrUextra 26808446 26808686 -2195970 - NTS_DM Other Other 0 240 1 1 789 1878 21 17 17 chrUextra 26808686 26808926 -2195730 - NTS_DM Other Other 0 240 1 1 789 672 20 39 39 chrUextra 26808926 26809029 -2195627 - NTS_DM Other Other 0 240 138 1 789 24 0 0 0 chrUextra 26809222 26809246 -2195410 + AT_rich Low_complexity Low_complexity 1 24 0 1 789 426 197 0 0 chrUextra 26809520 26809591 -2195065 - HETA LINE telomeric -1478 4603 4533 1 789 3864 43 60 54 chrUextra 26809831 26810427 -2194229 - PROTOP_A DNA P -329 776 177 1 789 2559 72 9 91 chrUextra 26810544 26811126 -2193530 - DMSAT6 Satellite Satellite 0 533 1 1 789 470 220 19 55 chrUextra 26811233 26811763 -2192893 + GA-rich Low_complexity Low_complexity 1 510 0 1 789 308 0 0 0 chrUextra 26811925 26811959 -2192697 - LSU-rRNA_Dme rRNA rRNA -2079 1821 1788 1 789 4624 4 6 6 chrUextra 26811999 26812524 -2192132 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1267 1 789 2329 105 52 19 chrUextra 26812636 26813223 -2191433 - DMSAT6 Satellite Satellite -3 606 1 1 789 443 36 0 0 chrUextra 26813323 26813379 -2191277 + ARS406_DM Unknown Unknown 104 159 -194 1 789 1867 180 25 9 chrUextra 26813388 26813800 -2190856 - SAR_DM Satellite Satellite -572 540 41 1 789 654 56 56 0 chrUextra 26813800 26813889 -2190767 + ARS406_DM Unknown Unknown 96 189 -164 1 789 1867 180 25 9 chrUextra 26813889 26813920 -2190736 - SAR_DM Satellite Satellite -572 40 1 1 789 4890 34 17 2 chrUextra 26814022 26814621 -2190035 + R1_DM LINE R1 656 1263 -4093 1 789 2451 103 7 43 chrUextra 26814743 26815320 -2189336 + DMSAT6 Satellite Satellite 1 555 0 1 789 3102 162 22 5 chrUextra 26815420 26816017 -2188639 - SAR_DM Satellite Satellite -594 878 272 1 789 28 48 0 0 chrUextra 26816275 26816317 -2188339 + AT_rich Low_complexity Low_complexity 1 42 0 1 789 3334 3 0 0 chrUextra 26816355 26816718 -2187938 - NOMAD_LTR LTR Gypsy 0 518 156 1 789 34 24 0 0 chrUextra 26816962 26817003 -2187653 + AT_rich Low_complexity Low_complexity 1 41 0 1 789 683 13 0 0 chrUextra 26817517 26817592 -2187064 + LSU-rRNA_Dme rRNA rRNA 2582 2656 -1244 1 789 4812 2 0 0 chrUextra 26817589 26818116 -2186540 + R1_DM LINE R1 3231 3757 -1599 1 789 3011 160 12 13 chrUextra 26818219 26818815 -2185841 + SAR_DM Satellite Satellite 332 926 -546 1 789 5293 5 2 3 chrUextra 26818915 26819514 -2185142 + R1_DM LINE R1 3358 3955 -1401 1 789 2390 90 7 35 chrUextra 26819615 26820213 -2184443 + DMSAT6 Satellite Satellite 1 581 -124 1 789 4832 2 0 0 chrUextra 26820313 26820833 -2183823 + LSU-rRNA_Dme rRNA rRNA 2113 2632 -1268 1 789 677 13 13 0 chrUextra 26820833 26820912 -2183744 + R1_DM LINE R1 1 80 -5276 1 789 644 312 27 23 chrUextra 26821012 26821485 -2183171 - Gypsy4_I LTR Gypsy -3804 3208 2320 1 789 2990 156 20 12 chrUextra 26821719 26822303 -2182353 + SAR_DM Satellite Satellite 370 958 -514 1 789 2581 193 8 20 chrUextra 26822411 26823009 -2181647 + SAR_DM Satellite Satellite 511 1101 -371 1 789 1188 270 40 32 chrUextra 26823115 26823708 -2180948 - SAR_DM Satellite Satellite -581 891 294 1 789 2958 171 10 12 chrUextra 26823808 26824407 -2180249 - SAR_DM Satellite Satellite -638 834 237 1 789 5572 0 0 2 chrUextra 26825206 26825805 -2178851 + LSU-rRNA_Dme rRNA rRNA 2712 3309 -591 1 789 2861 166 20 25 chrUextra 26825905 26826503 -2178153 + SAR_DM Satellite Satellite 256 850 -622 1 789 4004 63 12 12 chrUextra 26826603 26827201 -2177455 + FB4_DM DNA Tc1 2839 3436 -653 1 789 3691 5 0 0 chrUextra 26827301 26827698 -2176958 - SSU-rRNA_Dme rRNA rRNA -1598 397 1 1 789 32 0 0 0 chrUextra 26827830 26827862 -2176794 + AT_rich Low_complexity Low_complexity 1 32 0 1 789 1620 42 0 0 chrUextra 26828003 26828359 -2176297 + (CTTAT)n Simple_repeat Simple_repeat 1 356 0 1 789 1587 9 0 0 chrUextra 26828374 26828597 -2176059 + (CTTAT)n Simple_repeat Simple_repeat 1 223 0 1 789 688 327 33 10 chrUextra 26828849 26829249 -2175407 - GTWIN_I LTR Gypsy -2883 3538 3147 1 789 562 57 0 0 chrUextra 26829395 26829465 -2175191 - NTS_DM Other Other -170 70 1 1 789 1526 20 20 20 chrUextra 26829465 26829668 -2174988 - NTS_DM Other Other 0 240 38 1 789 898 9 9 27 chrUextra 26829668 26829779 -2174877 - NTS_DM Other Other -107 133 25 1 789 21 57 0 0 chrUextra 26829805 26829840 -2174816 + AT_rich Low_complexity Low_complexity 1 35 0 1 789 1200 26 0 7 chrUextra 26829840 26829993 -2174663 - NTS_DM Other Other -39 201 50 1 789 2969 188 7 3 chrUextra 26830093 26830691 -2173965 + SAR_DM Satellite Satellite 275 874 -598 1 789 1262 20 0 20 chrUextra 26831489 26831638 -2173018 - DOC2_DM LINE Jockey -4638 155 10 1 789 3008 12 0 0 chrUextra 26831750 26832087 -2172569 - DOC2_DM LINE Jockey 0 4793 4457 1 789 4410 4 2 0 chrUextra 26832187 26832663 -2171993 - SSU-rRNA_Dme rRNA rRNA -1518 477 1 1 789 5458 5 0 2 chrUextra 26832885 26833483 -2171173 + R1_DM LINE R1 4615 5211 -145 1 789 1777 0 0 0 chrUextra 26833583 26833772 -2170884 - LSU-rRNA_Dme rRNA rRNA -1924 1976 1788 1 789 3285 3 5 3 chrUextra 26833813 26834181 -2170475 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1423 1 789 325 207 24 35 chrUextra 26834288 26834373 -2170283 + HETRP_DM Satellite Satellite 1601 1684 -188 1 789 718 185 17 58 chrUextra 26834502 26834674 -2169982 + HETRP_DM Satellite Satellite 1518 1682 -190 1 789 414 107 0 0 chrUextra 26834823 26834879 -2169777 + HETRP_DM Satellite Satellite 1529 1584 -288 1 789 5480 2 2 3 chrUextra 26835677 26836275 -2168381 - SSU-rRNA_Dme rRNA rRNA -456 1539 943 1 789 2915 169 13 10 chrUextra 26836375 26836973 -2167683 - SAR_DM Satellite Satellite -443 1029 430 1 789 3484 5 3 0 chrUextra 26837073 26837451 -2167205 + SSU-rRNA_Dme rRNA rRNA 1617 1995 0 1 789 5331 17 0 0 chrUextra 26837778 26838369 -2166287 - Gypsy4_I LTR Gypsy -3355 2933 2343 1 789 773 0 12 0 chrUextra 26838469 26838555 -2166101 + LSU-rRNA_Dme rRNA rRNA 3814 3900 0 1 789 266 196 0 19 chrUextra 26838656 26838708 -2165948 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 789 266 196 0 19 chrUextra 26838748 26838800 -2165856 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 789 266 196 0 19 chrUextra 26838840 26838892 -2165764 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 789 1096 8 0 0 chrUextra 26838944 26839067 -2165589 + LSU-rRNA_Dme rRNA rRNA 2191 2313 -1587 1 789 1450 22 6 0 chrUextra 26839167 26839347 -2165309 - BATUMI_I LTR Pao -478 7485 7305 1 789 3170 29 8 8 chrUextra 26839372 26839760 -2164896 + BATUMI_I LTR Pao 6427 6814 -1149 1 789 25 0 0 0 chrUextra 26839888 26839913 -2164743 + AT_rich Low_complexity Low_complexity 1 25 0 1 789 266 196 0 19 chrUextra 26839915 26839967 -2164689 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 789 283 176 0 19 chrUextra 26840007 26840059 -2164597 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 789 22 56 0 0 chrUextra 26840072 26840108 -2164548 + AT_rich Low_complexity Low_complexity 1 36 0 1 789 928 9 0 27 chrUextra 26840134 26840246 -2164410 + NTS_DM Other Other 25 133 -107 1 789 559 13 0 62 chrUextra 26840249 26840329 -2164327 + NTS_DM Other Other 59 133 -107 1 789 737 52 0 10 chrUextra 26840329 26840410 -2164246 + NTS_DM Other Other 38 118 -122 1 789 239 54 0 26 chrUextra 26840410 26840448 -2164208 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 789 737 52 0 10 chrUextra 26840448 26840463 -2164193 + NTS_DM Other Other 119 133 -107 1 789 2920 168 5 7 chrUextra 26840563 26841140 -2163516 - SAR_DM Satellite Satellite -571 901 326 1 789 5092 25 2 5 chrUextra 26841261 26841859 -2162797 + R1_DM LINE R1 3387 3982 -1374 1 789 558 0 0 0 chrUextra 26842495 26842557 -2162099 + (TTCTC)n Simple_repeat Simple_repeat 2 63 0 1 789 335 89 0 18 chrUextra 26842678 26842687 -2161969 + (AATAG)n Simple_repeat Simple_repeat 2 10 0 1 789 1515 28 0 0 chrUextra 26842687 26842867 -2161789 + (CAATA)n Simple_repeat Simple_repeat 1 180 0 1 789 1611 32 0 2 chrUextra 26842867 26843255 -2161401 + (AATAG)n Simple_repeat Simple_repeat 1 387 0 1 789 558 0 0 0 chrUextra 26843355 26843417 -2161239 + (CAAAA)n Simple_repeat Simple_repeat 5 66 0 1 789 1620 6 0 0 chrUextra 26844317 26844651 -2160005 + (TTCTC)n Simple_repeat Simple_repeat 1 334 0 1 789 2428 155 22 84 chrUextra 26844751 26845349 -2159307 + SAR_DM Satellite Satellite 529 1089 -383 1 789 2504 103 14 24 chrUextra 26845453 26846047 -2158609 - DMSAT6 Satellite Satellite -3 588 1 1 789 5209 25 10 0 chrUextra 26846147 26846745 -2157911 - FW_DM LINE Jockey -1882 2810 2207 1 789 1545 5 5 0 chrUextra 26846845 26847031 -2157625 + TART_B1 LINE telomeric 10343 10529 -125 1 789 2366 163 2 2 chrUextra 26847032 26847443 -2157213 + HETA LINE telomeric 2890 3300 -2781 1 789 1041 96 0 0 chrUextra 26847547 26847905 -2156751 + (ACATG)n Simple_repeat Simple_repeat 1 358 0 1 789 1406 59 11 0 chrUextra 26848247 26848434 -2156222 + TART LINE telomeric 10476 10664 -3813 1 789 1117 165 57 70 chrUextra 26848453 26848837 -2155819 + HETA LINE telomeric 1 379 -5702 1 789 2506 118 12 14 chrUextra 26848940 26849535 -2155121 + DMSAT6 Satellite Satellite 1 593 -85 1 789 2800 184 12 8 chrUextra 26849637 26850234 -2154422 + SAR_DM Satellite Satellite 410 1008 -464 1 789 1012 76 0 0 chrUextra 26850335 26850479 -2154177 - ARS406_DM Unknown Unknown -206 147 4 1 789 2120 179 11 5 chrUextra 26850490 26850933 -2153723 + SAR_DM Satellite Satellite 326 771 -701 1 789 5304 12 5 2 chrUextra 26851033 26851631 -2153025 + R1_DM LINE R1 3647 4246 -1110 1 789 459 0 0 0 chrUextra 26851731 26851782 -2152874 + (TTCTC)n Simple_repeat Simple_repeat 5 55 0 1 789 207 0 0 0 chrUextra 26851784 26851807 -2152849 + (AGCTG)n Simple_repeat Simple_repeat 2 24 0 1 789 1620 6 0 0 chrUextra 26851807 26852327 -2152329 + (GAGAA)n Simple_repeat Simple_repeat 1 520 0 1 789 3987 23 37 4 chrUextra 26852435 26852921 -2151735 + IDEFIX_LTR LTR Gypsy 93 594 0 1 789 681 123 0 0 chrUextra 26853127 26853233 -2151423 + (TA)n Simple_repeat Simple_repeat 2 107 0 1 789 3605 5 7 7 chrUextra 26853233 26853647 -2151009 - DM297_LTR LTR Gypsy 0 414 1 1 789 708 13 0 0 chrUextra 26853647 26853725 -2150931 - DM297_I LTR Gypsy 0 6167 6090 1 789 225 0 95 71 chrUextra 26853825 26853867 -2150789 + NTS_DM Other Other 198 240 0 1 789 1972 4 17 13 chrUextra 26853867 26854106 -2150550 + NTS_DM Other Other 1 240 0 1 789 1367 12 0 18 chrUextra 26854106 26854271 -2150385 + NTS_DM Other Other 1 162 -78 1 789 310 71 0 0 chrUextra 26854381 26854423 -2150233 + NTS_DM Other Other 4 45 -195 1 789 687 0 13 0 chrUextra 26854523 26854601 -2150055 + ROO_I LTR Pao 8178 8256 0 1 789 4017 0 0 0 chrUextra 26854601 26855029 -2149627 + ROO_LTR LTR Pao 1 428 0 1 789 835 0 0 0 chrUextra 26855029 26855121 -2149535 + R1_DM LINE R1 4921 5012 -344 1 789 5364 0 2 5 chrUextra 26855221 26855819 -2148837 + R1_DM LINE R1 932 1527 -3829 1 789 347 26 0 0 chrUextra 26855919 26855958 -2148698 - NTS_DM Other Other -201 39 1 1 789 1520 25 20 20 chrUextra 26855958 26856161 -2148495 - NTS_DM Other Other 0 240 38 1 789 928 9 0 27 chrUextra 26856161 26856273 -2148383 - NTS_DM Other Other -107 133 25 1 789 21 57 0 0 chrUextra 26856299 26856334 -2148322 + AT_rich Low_complexity Low_complexity 1 35 0 1 789 1332 18 0 6 chrUextra 26856334 26856499 -2148157 - NTS_DM Other Other -39 201 38 1 789 2795 180 8 7 chrUextra 26856621 26857208 -2147448 - SAR_DM Satellite Satellite -514 958 371 1 789 3861 244 22 38 chrUextra 26857314 26858603 -2146053 + SAR_DM Satellite Satellite 1 1267 -225 1 789 384 22 0 0 chrUextra 26858707 26858752 -2145904 + (TTCTC)n Simple_repeat Simple_repeat 1 45 0 1 789 5532 0 0 3 chrUextra 26859404 26860001 -2144655 - LSU-rRNA_Dme rRNA rRNA -455 3445 2851 1 789 4776 62 17 2 chrUextra 26860101 26860698 -2143958 - TART_B1 LINE telomeric -7129 3525 2920 1 789 1918 194 9 13 chrUextra 26861495 26861558 -2143098 - SAR_DM Satellite Satellite -730 595 468 1 789 925 201 169 16 chrUextra 26861558 26861866 -2142790 + XDMR_DM Unknown Unknown 6 360 0 1 789 1918 194 9 13 chrUextra 26861866 26862092 -2142564 - SAR_DM Satellite Satellite -730 467 1 1 789 3013 164 10 7 chrUextra 26862890 26863486 -2141170 - SAR_DM Satellite Satellite -533 939 342 1 789 3565 0 0 0 chrUextra 26863586 26863967 -2140689 + DMRT1B LINE R1 4803 5183 0 1 789 986 76 7 20 chrUextra 26864286 26864877 -2139779 - RSP Satellite Satellite -54 583 1 1 789 1788 195 68 24 chrUextra 26865677 26866273 -2138383 + SAR_DM Satellite Satellite 1 622 -432 1 789 1541 6 0 0 chrUextra 26866374 26866549 -2138107 - NTS_DM Other Other -65 175 1 1 789 1947 8 17 13 chrUextra 26866549 26866788 -2137868 - NTS_DM Other Other 0 240 1 1 789 1416 0 22 16 chrUextra 26866788 26866971 -2137685 - NTS_DM Other Other 0 240 57 1 789 5558 2 0 2 chrUextra 26867071 26867668 -2136988 + SSU-rRNA_Dme rRNA rRNA 308 903 -1092 1 789 5420 10 0 0 chrUextra 26867768 26868365 -2136291 + FW_DM LINE Jockey 2131 2727 -1965 1 789 5554 2 0 0 chrUextra 26868465 26869062 -2135594 - LSU-rRNA_Dme rRNA rRNA -630 3270 2674 1 789 2681 178 8 22 chrUextra 26869162 26869759 -2134897 - SAR_DM Satellite Satellite -369 1103 515 1 790 2805 176 12 8 chrUextra 26869859 26870456 -2134200 + SAR_DM Satellite Satellite 198 796 -676 1 790 5097 25 2 0 chrUextra 26870556 26871153 -2133503 + NINJA_I LTR Pao 3839 4436 -1575 1 790 2761 179 15 8 chrUextra 26871253 26871845 -2132811 + SAR_DM Satellite Satellite 481 1076 -396 1 790 3894 45 0 4 chrUextra 26871950 26872416 -2132240 + R1_DM LINE R1 1380 1843 -3513 1 790 1207 15 0 0 chrUextra 26872410 26872547 -2132109 + R1_DM LINE R1 2087 2223 -3133 1 790 1569 14 0 0 chrUextra 26872648 26872867 -2131789 + (TATAA)n Simple_repeat Simple_repeat 1 219 0 1 790 3455 3 3 0 chrUextra 26872867 26873244 -2131412 - IVK_DM LINE I -4 5398 5021 1 790 2709 180 30 5 chrUextra 26873349 26873941 -2130715 - SAR_DM Satellite Satellite -610 862 256 1 790 5515 5 0 0 chrUextra 26874043 26874638 -2130018 + SSU-rRNA_Dme rRNA rRNA 382 976 -1019 1 790 1796 52 0 0 chrUextra 26874746 26874959 -2129697 + R1_DM LINE R1 1247 1459 -3897 1 790 3120 28 0 3 chrUextra 26874970 26875335 -2129321 + R1_DM LINE R1 1556 1919 -3437 1 790 2478 112 15 27 chrUextra 26875435 26876032 -2128624 + DMSAT6 Satellite Satellite 1 589 -97 1 790 4708 6 6 7 chrUextra 26876132 26876672 -2127984 + LSU-rRNA_Dme rRNA rRNA 1253 1791 -2109 1 790 2596 87 13 39 chrUextra 26876829 26877426 -2127230 + DMSAT6 Satellite Satellite 1 582 -29 1 790 1332 18 0 6 chrUextra 26877601 26877766 -2126890 - NTS_DM Other Other -39 201 38 1 790 928 9 0 27 chrUextra 26877766 26877878 -2126778 - NTS_DM Other Other -107 133 25 1 790 22 56 0 0 chrUextra 26877904 26877940 -2126716 + AT_rich Low_complexity Low_complexity 1 36 0 1 790 277 176 0 19 chrUextra 26877953 26878005 -2126651 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 790 252 216 0 19 chrUextra 26878036 26878088 -2126568 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 790 5372 7 0 3 chrUextra 26878223 26878820 -2125836 - R1_DM LINE R1 -93 5263 4669 1 790 2706 16 29 0 chrUextra 26878932 26879244 -2125412 - QUASIMODO_I LTR Gypsy -5739 321 1 1 790 2476 4 0 4 chrUextra 26879244 26879517 -2125139 - QUASIMODO_LTR LTR Gypsy 0 658 387 1 790 1665 271 35 49 chrUextra 26879617 26880214 -2124442 - MAX_I LTR Pao -801 7113 6525 1 790 2501 92 12 28 chrUextra 26880340 26880911 -2123745 + DMSAT6 Satellite Satellite 1 562 -4 1 790 428 0 0 0 chrUextra 26881012 26881065 -2123591 + NTS_DM Other Other 81 133 -107 1 790 1332 18 0 6 chrUextra 26881065 26881230 -2123426 + NTS_DM Other Other 38 201 -39 1 790 21 57 0 0 chrUextra 26881230 26881265 -2123391 + AT_rich Low_complexity Low_complexity 1 35 0 1 790 869 19 9 27 chrUextra 26881291 26881402 -2123254 + NTS_DM Other Other 25 133 -107 1 790 870 0 0 0 chrUextra 26881402 26881498 -2123158 + NTS_DM Other Other 38 133 -107 1 790 893 27 0 0 chrUextra 26881498 26881608 -2123048 + NTS_DM Other Other 38 147 -93 1 790 2651 189 15 7 chrUextra 26881708 26882305 -2122351 - SAR_DM Satellite Satellite -673 799 198 1 790 3440 148 5 14 chrUextra 26882405 26882999 -2121657 - TAHRE LINE telomeric -8 10455 9867 1 790 1854 21 17 17 chrUextra 26883126 26883366 -2121290 + NTS_DM Other Other 1 240 0 1 790 1864 21 17 17 chrUextra 26883366 26883606 -2121050 + NTS_DM Other Other 1 240 0 1 790 828 21 0 0 chrUextra 26883606 26883699 -2120957 + NTS_DM Other Other 1 93 -147 1 790 2443 92 19 44 chrUextra 26883799 26884368 -2120288 + DMSAT6 Satellite Satellite 1 555 -71 1 790 4387 52 34 5 chrUextra 26884496 26885093 -2119563 - R1_DM LINE R1 -1596 3760 3252 1 790 1387 47 5 54 chrUextra 26885194 26885397 -2119259 + BATUMI_LTR LTR Pao 80 272 0 1 790 3182 28 20 10 chrUextra 26885397 26885790 -2118866 + BATUMI_I LTR Pao 1 397 -7566 1 790 3046 156 12 10 chrUextra 26885890 26886487 -2118169 + SAR_DM Satellite Satellite 389 986 -486 1 790 2463 111 17 20 chrUextra 26886588 26887179 -2117477 - DMSAT6 Satellite Satellite -77 588 1 1 790 734 0 12 0 chrUextra 26887284 26887370 -2117286 + (TTATA)n Simple_repeat Simple_repeat 4 90 0 1 790 3333 6 0 0 chrUextra 26887370 26887731 -2116925 - BEL_LTR LTR Pao 0 361 1 1 790 1340 0 13 0 chrUextra 26887731 26887881 -2116775 - BEL_I LTR Pao 0 5404 5253 1 790 5216 27 3 0 chrUextra 26888677 26889273 -2115383 + R1_DM LINE R1 4679 5276 -80 1 790 522 0 0 0 chrUextra 26889373 26889431 -2115225 + (GAGAA)n Simple_repeat Simple_repeat 2 59 0 1 790 5502 2 0 0 chrUextra 26890069 26890665 -2113991 + DOC2_DM LINE Jockey 4126 4721 -72 1 790 404 0 0 0 chrUextra 26890765 26890810 -2113846 - G6_DM LINE Jockey -1997 45 1 1 790 1883 9 0 13 chrUextra 26890808 26891043 -2113613 + S_DM DNA Tc1 1505 1736 0 1 790 1860 85 3 28 chrUextra 26891071 26891361 -2113295 + TART LINE telomeric 2890 3172 -11305 1 790 1221 193 8 17 chrUextra 26891475 26892057 -2112599 - SAR_DM Satellite Satellite -749 577 1 1 790 2462 114 38 14 chrUextra 26892170 26892753 -2111903 + DMSAT6 Satellite Satellite 1 597 0 1 790 5504 0 3 0 chrUextra 26892853 26893449 -2111207 - LSU-rRNA_Dme rRNA rRNA -626 3274 2677 1 790 5479 0 0 0 chrUextra 26894245 26894841 -2109815 - ROO_I LTR Pao -3537 4719 4124 1 790 5414 5 10 0 chrUextra 26894941 26895537 -2109119 - IVK_DM LINE I -138 5264 4663 1 790 2653 87 37 10 chrUextra 26895637 26896233 -2108423 + DMSAT6 Satellite Satellite 1 612 -46 1 790 2664 181 15 12 chrUextra 26896335 26896929 -2107727 - SAR_DM Satellite Satellite -416 1056 461 1 790 5184 29 0 0 chrUextra 26897725 26898321 -2106335 + R1_DM LINE R1 2283 2878 -2478 1 790 596 218 7 22 chrUextra 26898424 26898560 -2106096 - HETRP_DM Satellite Satellite -190 1682 1549 1 790 210 37 0 0 chrUextra 26898560 26898587 -2106069 + (TC)n Simple_repeat Simple_repeat 2 28 0 1 790 706 191 13 26 chrUextra 26898731 26898887 -2105769 - HETRP_DM Satellite Satellite -190 1682 1529 1 790 4673 61 0 5 chrUextra 26899117 26899713 -2104943 - STALKER4_I LTR Gypsy -1361 5169 4577 1 790 5377 0 0 0 chrUextra 26899823 26900409 -2104247 - ROO_I LTR Pao -2320 5936 5351 1 790 5467 7 0 0 chrUextra 26900509 26901105 -2103551 + R1_DM LINE R1 4689 5284 -72 1 790 3203 8 3 0 chrUextra 26901205 26901589 -2103067 + Invader2_I LTR Gypsy 4208 4592 0 1 790 1865 19 0 5 chrUextra 26901589 26901801 -2102855 + Invader2_LTR LTR Gypsy 1 211 -55 1 790 2691 178 13 17 chrUextra 26901901 26902497 -2102159 + SAR_DM Satellite Satellite 483 1076 -396 1 790 2801 82 17 12 chrUextra 26902597 26903193 -2101463 - DMSAT6 Satellite Satellite -89 599 1 1 790 3288 12 81 2 chrUextra 26903293 26903889 -2100767 - SSU-rRNA_Dme rRNA rRNA -604 1391 749 1 790 2706 190 7 7 chrUextra 26903991 26904585 -2100071 - SAR_DM Satellite Satellite -670 802 209 1 790 4989 5 8 0 chrUextra 26904685 26905281 -2099375 + PROTOP_A DNA P 224 824 -281 1 790 4450 64 3 34 chrUextra 26905381 26905977 -2098679 + Gypsy12_LTR LTR Gypsy 313 890 -1446 1 790 1620 13 0 3 chrUextra 26906361 26906671 -2097985 + (TTGTG)n Simple_repeat Simple_repeat 1 309 0 1 790 5359 0 0 2 chrUextra 26908861 26909457 -2095199 + ROO_I LTR Pao 4790 5384 -2872 1 790 1606 11 5 0 chrUextra 26909557 26909744 -2094912 + DM176_LTR LTR Gypsy 320 507 0 1 790 3359 20 0 27 chrUextra 26909744 26910153 -2094503 + DM176_I LTR Gypsy 1 398 -6022 1 790 537 16 0 0 chrUextra 26910253 26910315 -2094341 + (TTCTC)n Simple_repeat Simple_repeat 3 64 0 1 790 2419 244 49 8 chrUextra 26910955 26911545 -2093111 - TABOR_I LTR Gypsy -1998 4338 3725 1 790 1984 169 8 8 chrUextra 26912341 26912930 -2091726 + SAR_DM Satellite Satellite 1 588 -558 1 790 1610 188 35 7 chrUextra 26913038 26913612 -2091044 - SAR_DM Satellite Satellite -749 590 1 1 790 4783 40 35 5 chrUextra 26913733 26914329 -2090327 + R1_DM LINE R1 802 1415 -3941 1 790 3481 0 0 3 chrUextra 26914429 26914814 -2089842 + Copia_I LTR Copia 436 819 -3774 1 790 2597 101 10 24 chrUextra 26915125 26915715 -2088941 - DMSAT6 Satellite Satellite -88 582 1 1 790 1798 77 3 29 chrUextra 26915820 26916082 -2088574 + STALKER4_LTR LTR Gypsy 149 399 -3 1 790 25 0 0 0 chrUextra 26916170 26916195 -2088461 + AT_rich Low_complexity Low_complexity 1 25 0 1 790 825 207 21 21 chrUextra 26916219 26916411 -2088245 + Stalker2_I LTR Gypsy 291 482 -6920 1 790 2677 100 19 27 chrUextra 26916525 26917110 -2087546 - DMSAT6 Satellite Satellite 0 580 1 1 790 2852 183 5 3 chrUextra 26917211 26917803 -2086853 + SAR_DM Satellite Satellite 287 879 -593 1 790 841 45 45 0 chrUextra 26917905 26918015 -2086641 + ARS406_DM Unknown Unknown 75 189 -164 1 790 3594 249 33 34 chrUextra 26917917 26919193 -2085463 - SAR_DM Satellite Satellite -203 1275 1 1 790 2752 172 9 11 chrUextra 26919296 26919867 -2084789 + SAR_DM Satellite Satellite 507 1076 -396 1 790 3001 167 8 10 chrUextra 26919991 26920585 -2084071 - SAR_DM Satellite Satellite -466 1006 414 1 790 1035 101 78 6 chrUextra 26921098 26921277 -2083379 - DMSAT6 Satellite Satellite -251 219 28 1 790 384 238 0 0 chrUextra 26921380 26921506 -2083150 + (CAAA)n Simple_repeat Simple_repeat 4 129 0 1 790 5011 12 20 2 chrUextra 26922075 26922670 -2081986 + Invader2_I LTR Gypsy 68 673 -3919 1 790 5052 35 0 2 chrUextra 26922770 26923365 -2081291 - DMRT1B LINE R1 -628 4555 3962 1 790 2618 83 25 5 chrUextra 26923465 26924060 -2080596 + DMSAT6 Satellite Satellite 1 607 -40 1 790 1726 171 24 16 chrUextra 26924169 26924543 -2080113 - SAR_DM Satellite Satellite -535 937 561 1 790 1079 16 0 0 chrUextra 26924557 26924686 -2079970 - BS LINE Jockey 0 5126 4998 1 790 408 121 0 0 chrUextra 26924687 26924745 -2079911 + ARS406_DM Unknown Unknown 132 189 -164 1 790 582 98 0 0 chrUextra 26924855 26924937 -2079719 - Stalker2_I LTR Gypsy -3945 3457 3376 1 790 3459 18 0 0 chrUextra 26924933 26925333 -2079323 - STALKER4_I LTR Gypsy -3510 3020 2621 1 790 1130 0 0 0 chrUextra 26925329 26925450 -2079206 - STALKER4_I LTR Gypsy -2239 4291 4171 1 790 4040 111 5 15 chrUextra 26925550 26926145 -2078511 - Gypsy12_I LTR Gypsy -3051 2495 1907 1 790 2666 190 14 12 chrUextra 26926246 26926838 -2077818 + SAR_DM Satellite Satellite 293 885 -587 1 790 2433 128 14 42 chrUextra 26926940 26927532 -2077124 - DMSAT6 Satellite Satellite -37 574 1 1 790 2526 114 7 24 chrUextra 26927635 26928229 -2076427 + DMSAT6 Satellite Satellite 1 583 -64 1 790 26 30 0 0 chrUextra 26928872 26928905 -2075751 + AT_rich Low_complexity Low_complexity 1 33 0 1 790 5375 7 2 3 chrUextra 26929025 26929620 -2075036 + LSU-rRNA_Dme rRNA rRNA 1047 1640 -2260 1 790 691 0 0 0 chrUextra 26930415 26930495 -2074161 + DM176_I LTR Gypsy 3109 3188 -3232 1 790 4637 2 27 0 chrUextra 26930491 26931009 -2073647 + DM176_I LTR Gypsy 3308 3839 -2581 1 790 2487 7 0 4 chrUextra 26931110 26931387 -2073269 + LSU-rRNA_Dme rRNA rRNA 3625 3900 0 1 790 266 196 0 19 chrUextra 26931488 26931540 -2073116 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 790 266 196 0 19 chrUextra 26931580 26931632 -2073024 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 790 5191 27 2 0 chrUextra 26931805 26932400 -2072256 - R1_DM LINE R1 -138 5218 4623 1 790 2451 99 3 61 chrUextra 26932523 26933095 -2071561 - DMSAT6 Satellite Satellite 0 538 1 1 790 3037 166 17 5 chrUextra 26933196 26933790 -2070866 - SAR_DM Satellite Satellite -535 937 337 1 790 1736 202 119 18 chrUextra 26933894 26934448 -2070208 - SAR_DM Satellite Satellite -683 789 180 1 790 751 133 22 15 chrUextra 26934348 26934485 -2070171 + ARS406_DM Unknown Unknown 8 145 -208 1 790 5308 0 25 0 chrUextra 26935280 26935875 -2068781 + ROO_I LTR Pao 6163 6772 -1484 1 790 297 0 0 0 chrUextra 26935975 26936008 -2068648 + (TTCTC)n Simple_repeat Simple_repeat 2 34 0 1 790 2992 158 20 7 chrUextra 26936678 26937265 -2067391 + SAR_DM Satellite Satellite 326 920 -552 1 790 2969 181 7 3 chrUextra 26937366 26937960 -2066696 - SAR_DM Satellite Satellite -620 852 257 1 790 4349 71 3 0 chrUextra 26938060 26938655 -2066001 - DM412 LTR Gypsy -3000 3897 3301 1 790 713 103 112 0 chrUextra 26938755 26938871 -2065785 - G2_DM LINE Jockey -447 2655 2527 1 790 1216 44 0 0 chrUextra 26938867 26939026 -2065630 + G2_DM LINE Jockey 2934 3092 -10 1 790 2468 53 6 6 chrUextra 26939026 26939350 -2065306 - G2_DM LINE Jockey -574 2528 2205 1 790 2080 178 18 10 chrUextra 26939451 26939907 -2064749 - SAR_DM Satellite Satellite -521 598 49 1 790 848 30 0 0 chrUextra 26939907 26940007 -2064649 + ARS406_DM Unknown Unknown 90 189 -164 1 790 2080 178 18 10 chrUextra 26940007 26940045 -2064611 - SAR_DM Satellite Satellite -521 48 1 1 790 5517 3 0 0 chrUextra 26940145 26940740 -2063916 - LSU-rRNA_Dme rRNA rRNA -847 3053 2459 1 790 5438 3 0 0 chrUextra 26940840 26941435 -2063221 - R1_DM LINE R1 -1908 3448 2854 1 790 1611 0 0 0 chrUextra 26941535 26941832 -2062824 + (CACAA)n Simple_repeat Simple_repeat 1 297 0 1 790 2841 21 3 0 chrUextra 26942230 26942555 -2062101 + R1_DM LINE R1 3924 4249 -1107 1 790 2053 29 156 0 chrUextra 26942550 26942825 -2061831 + R1_DM LINE R1 458 775 -4581 1 790 1462 212 82 42 chrUextra 26942967 26943520 -2061136 - TAHRE LINE telomeric -3805 10672 9888 1 790 1005 289 38 23 chrUextra 26943641 26944215 -2060441 + SAR_DM Satellite Satellite 205 787 -685 1 790 1071 0 0 0 chrUextra 26944321 26944440 -2060216 + (TG)n Simple_repeat Simple_repeat 1 119 0 1 790 2510 92 22 17 chrUextra 26945011 26945605 -2059051 + DMSAT6 Satellite Satellite 1 597 0 1 790 2486 111 12 16 chrUextra 26946425 26946995 -2057661 + DMSAT6 Satellite Satellite 1 568 -1 1 790 369 0 0 0 chrUextra 26947649 26947690 -2056966 + (CAAGA)n Simple_repeat Simple_repeat 5 45 0 1 790 3182 275 43 21 chrUextra 26947790 26949775 -2054881 - SAR_DM Satellite Satellite -454 2027 1 1 790 1158 122 0 0 chrUextra 26949875 26950319 -2054337 + (TA)n Simple_repeat Simple_repeat 1 444 0 1 790 1113 74 0 0 chrUextra 26950322 26950470 -2054186 - DOC3_DM LINE Jockey -4158 582 435 1 790 2995 157 15 10 chrUextra 26950573 26951160 -2053496 + SAR_DM Satellite Satellite 369 958 -514 1 790 1121 65 184 23 chrUextra 26951510 26951684 -2052972 - DMCR1A LINE CR1 0 4470 4269 1 790 1530 23 0 0 chrUextra 26951683 26951858 -2052798 - DMCR1A LINE CR1 -353 4117 3943 1 790 286 0 0 0 chrUextra 26951958 26951990 -2052666 + DM1731_I LTR Copia 3945 3976 0 1 790 2885 39 0 0 chrUextra 26951990 26952326 -2052330 + DM1731_LTR LTR Copia 1 336 0 1 790 1108 164 13 9 chrUextra 26952325 26952381 -2052275 + SAR_DM Satellite Satellite 399 623 -846 1 790 1198 83 0 0 chrUextra 26952381 26952549 -2052107 - ARS406_DM Unknown Unknown -164 189 22 1 790 1569 21 5 0 chrUextra 26952652 26952841 -2051815 + Invader4_I LTR Gypsy 2224 2413 0 1 790 3217 3 0 0 chrUextra 26952841 26953187 -2051469 + Invader4_LTR LTR Gypsy 1 346 0 1 790 233 29 0 0 chrUextra 26953187 26953219 -2051437 - Copia2_LTR_DM LTR Copia -166 32 1 1 790 3641 271 61 26 chrUextra 26953346 26955304 -2049352 + SAR_DM Satellite Satellite 1 2026 -203 1 790 683 47 0 0 chrUextra 26955242 26955328 -2049328 - ARS406_DM Unknown Unknown -164 189 104 1 790 1060 16 0 0 chrUextra 26955428 26955554 -2049102 - NTS_DM Other Other -77 163 38 1 790 906 9 0 35 chrUextra 26955554 26955667 -2048989 - NTS_DM Other Other -107 133 25 1 790 22 56 0 0 chrUextra 26955693 26955729 -2048927 + AT_rich Low_complexity Low_complexity 1 36 0 1 790 278 176 0 19 chrUextra 26955742 26955794 -2048862 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 790 268 196 0 19 chrUextra 26955825 26955877 -2048779 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 790 268 196 0 19 chrUextra 26955917 26955969 -2048687 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 790 4571 68 34 14 chrUextra 26956122 26956716 -2047940 + Gypsy12_I LTR Gypsy 4449 5054 -492 1 790 4104 23 2 0 chrUextra 26957510 26957985 -2046671 - R1_DM LINE R1 -2459 2897 2422 1 790 944 27 0 0 chrUextra 26957986 26958096 -2046560 - ACCORD2_LTR LTR Gypsy -1 214 105 1 790 1233 73 0 0 chrUextra 26958204 26958382 -2046274 + (GAGAA)n Simple_repeat Simple_repeat 2 179 0 1 790 717 157 0 0 chrUextra 26958382 26958535 -2046121 + (AGATG)n Simple_repeat Simple_repeat 5 157 0 1 790 598 6 0 135 chrUextra 26958898 26959269 -2045387 + (TAAAAA)n Simple_repeat Simple_repeat 1 320 0 1 790 5266 0 2 2 chrUextra 26959619 26960186 -2044470 - LSU-rRNA_Dme rRNA rRNA 0 3900 3334 1 790 209 179 0 0 chrUextra 26961426 26961465 -2043191 + (CTG)n Simple_repeat Simple_repeat 3 41 0 1 790 298 204 0 31 chrUextra 26961473 26961569 -2043087 - ROO_I LTR Pao -7523 733 641 1 790 2787 0 3 3 chrUextra 26961674 26961980 -2042676 + R2_DM LINE R2 3302 3607 0 1 790 674 38 25 0 chrUextra 26961981 26962061 -2042595 + LSU-rRNA_Dme rRNA rRNA 2578 2659 -1241 1 790 1881 9 0 0 chrUextra 26962058 26962268 -2042388 + R1_DM LINE R1 4803 5012 -344 1 790 2290 50 4 0 chrUextra 26962368 26962649 -2042007 - R1_DM LINE R1 -242 5114 4833 1 790 2727 22 0 0 chrUextra 26962647 26962962 -2041694 - R1_DM LINE R1 -1697 3659 3345 1 790 5424 2 2 3 chrUextra 26963062 26963656 -2041000 + LSU-rRNA_Dme rRNA rRNA 749 1341 -2559 1 790 639 0 0 0 chrUextra 26964450 26964521 -2040135 + (TTGTG)n Simple_repeat Simple_repeat 2 72 0 1 790 301 0 22 43 chrUextra 26965150 26965196 -2039460 + (TAA)n Simple_repeat Simple_repeat 3 47 0 1 790 4247 15 0 8 chrUextra 26965216 26965738 -2038918 - HMSBEAGLE_I LTR Gypsy -5742 787 270 1 790 2876 178 8 8 chrUextra 26965843 26966432 -2038224 - SAR_DM Satellite Satellite -425 1047 459 1 790 21 36 0 0 chrUextra 26966870 26966898 -2037758 + AT_rich Low_complexity Low_complexity 1 28 0 1 790 34 24 0 0 chrUextra 26967378 26967419 -2037237 + AT_rich Low_complexity Low_complexity 1 41 0 1 790 994 0 9 0 chrUextra 26967708 26967820 -2036836 + LSU-rRNA_Dme rRNA rRNA 1 113 -3787 1 790 1180 8 0 8 chrUextra 26967923 26968057 -2036599 - NTS_DM Other Other -107 133 1 1 790 1878 21 17 17 chrUextra 26968057 26968297 -2036359 - NTS_DM Other Other 0 240 1 1 790 1506 25 20 20 chrUextra 26968297 26968500 -2036156 - NTS_DM Other Other 0 240 38 1 790 2640 3 0 0 chrUextra 26969308 26969592 -2035064 - LSU-rRNA_Dme rRNA rRNA -977 2923 2640 1 790 2820 13 0 0 chrUextra 26969590 26969902 -2034754 - R1_DM LINE R1 0 5356 5045 1 790 2901 178 10 5 chrUextra 26970003 26970591 -2034065 + SAR_DM Satellite Satellite 272 862 -610 1 790 680 0 0 12 chrUextra 26970696 26970777 -2033879 + (CGAGA)n Simple_repeat Simple_repeat 1 80 0 1 790 1620 0 0 0 chrUextra 26970779 26971024 -2033632 + (GAGAA)n Simple_repeat Simple_repeat 1 245 0 1 790 2906 185 8 5 chrUextra 26971391 26971984 -2032672 + SAR_DM Satellite Satellite 224 818 -654 1 790 576 0 0 0 chrUextra 26972778 26972842 -2031814 + (GAGAA)n Simple_repeat Simple_repeat 5 68 0 1 790 5034 2 0 2 chrUextra 26973472 26974015 -2030641 + LSU-rRNA_Dme rRNA rRNA 2145 2686 -1214 1 790 483 0 0 0 chrUextra 26974012 26974066 -2030590 + R1_DM LINE R1 852 905 -4451 1 790 2965 48 6 0 chrUextra 26974166 26974522 -2030134 + G5_DM LINE Jockey 4010 4367 -489 1 790 1926 46 4 0 chrUextra 26974519 26974760 -2029896 + G5_DM LINE Jockey 4602 4843 -13 1 790 3826 0 0 0 chrUextra 26974860 26975279 -2029377 - R2_DM LINE R2 -2807 800 382 1 790 1593 6 0 0 chrUextra 26975282 26975454 -2029202 - LSU-rRNA_Dme rRNA rRNA -1322 2578 2407 1 790 2255 116 7 67 chrUextra 26976955 26977534 -2027122 + DMSAT6 Satellite Satellite 1 544 0 1 790 278 176 0 19 chrUextra 26977637 26977689 -2026967 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 790 22 56 0 0 chrUextra 26977702 26977738 -2026918 + AT_rich Low_complexity Low_complexity 1 36 0 1 790 917 18 0 27 chrUextra 26977764 26977876 -2026780 + NTS_DM Other Other 25 133 -107 1 790 1532 20 20 20 chrUextra 26977876 26978079 -2026577 + NTS_DM Other Other 38 240 0 1 790 1314 20 0 0 chrUextra 26978079 26978230 -2026426 + NTS_DM Other Other 1 151 -89 1 790 34 24 0 0 chrUextra 26978403 26978444 -2026212 + AT_rich Low_complexity Low_complexity 1 41 0 1 790 21 95 0 0 chrUextra 26978658 26978721 -2025935 + AT_rich Low_complexity Low_complexity 1 63 0 1 790 1770 0 0 0 chrUextra 26978733 26978924 -2025732 + LSU-rRNA_Dme rRNA rRNA 1 191 -3709 1 790 497 17 0 17 chrUextra 26979024 26979083 -2025573 - NTS_DM Other Other -182 58 1 1 790 1526 20 20 20 chrUextra 26979083 26979286 -2025370 - NTS_DM Other Other 0 240 38 1 790 876 0 0 0 chrUextra 26979286 26979382 -2025274 - NTS_DM Other Other -107 133 38 1 790 898 9 9 27 chrUextra 26979382 26979493 -2025163 - NTS_DM Other Other -107 133 25 1 790 21 57 0 0 chrUextra 26979519 26979554 -2025102 + AT_rich Low_complexity Low_complexity 1 35 0 1 790 451 32 0 16 chrUextra 26979554 26979618 -2025038 - NTS_DM Other Other -39 201 139 1 790 483 66 0 0 chrUextra 26979718 26979779 -2024877 - DIVER2_I LTR Pao -2003 2144 2084 1 790 917 45 0 0 chrUextra 26979789 26979900 -2024756 - DIVER2_I LTR Pao -4036 111 1 1 790 2753 28 91 30 chrUextra 26979900 26980263 -2024393 - DIVER2_LTR LTR Pao 0 385 1 1 790 376 75 19 0 chrUextra 26980263 26980312 -2024344 + G3_DM LINE Jockey 4283 4332 -273 1 790 2889 176 10 10 chrUextra 26980419 26981006 -2023650 - SAR_DM Satellite Satellite -433 1039 453 1 790 5152 24 0 0 chrUextra 26981106 26981698 -2022958 - R1_DM LINE R1 -2303 3053 2462 1 790 5331 2 0 0 chrUextra 26981800 26982394 -2022262 - LSU-rRNA_Dme rRNA rRNA -2956 944 351 1 790 1184 27 14 0 chrUextra 26982494 26982641 -2022015 - BATUMI_I LTR Pao -1388 6575 6427 1 790 3588 14 0 2 chrUextra 26982664 26983088 -2021568 + BATUMI_I LTR Pao 7303 7725 -238 1 790 3584 5 7 10 chrUextra 26983188 26983603 -2021053 - DM297_LTR LTR Gypsy 0 414 1 1 790 5138 2 0 34 chrUextra 26983882 26984470 -2020186 + BS2 LINE Jockey 4154 4721 0 1 790 5106 20 2 8 chrUextra 26984576 26985170 -2019486 - LSU-rRNA_Dme rRNA rRNA -2468 1432 843 1 790 5430 3 0 0 chrUextra 26985270 26985864 -2018792 - R1_DM LINE R1 -1640 3716 3123 1 790 5511 0 0 2 chrUextra 26985964 26986557 -2018099 - LSU-rRNA_Dme rRNA rRNA -603 3297 2706 1 790 517 61 207 0 chrUextra 26986657 26986739 -2017917 - BATUMI_I LTR Pao -858 7105 7007 1 790 3787 58 22 6 chrUextra 26986745 26987250 -2017406 - BATUMI_I LTR Pao 0 7963 7451 1 790 5012 25 0 2 chrUextra 26987350 26987943 -2016713 + QUASIMODO_I LTR Gypsy 4575 5166 -894 1 790 2966 138 17 46 chrUextra 26988049 26988636 -2016020 + SAR_DM Satellite Satellite 353 922 -550 1 790 1507 284 37 16 chrUextra 26988759 26989328 -2015328 + G6_DM LINE Jockey 322 902 -1140 1 790 5242 5 2 3 chrUextra 26989429 26990022 -2014634 - R1_DM LINE R1 -1073 4283 3692 1 790 2900 171 10 10 chrUextra 26990124 26990715 -2013941 - SAR_DM Satellite Satellite -417 1055 465 1 790 534 119 36 0 chrUextra 26990865 26990949 -2013707 - NTS_DM Other Other -150 90 4 1 790 1401 6 0 18 chrUextra 26991060 26991225 -2013431 - NTS_DM Other Other -78 162 1 1 790 1438 0 22 16 chrUextra 26991225 26991408 -2013248 - NTS_DM Other Other 0 240 57 1 790 5306 3 3 7 chrUextra 26991508 26992101 -2012555 + SSU-rRNA_Dme rRNA rRNA 905 1495 -500 1 790 462 226 35 0 chrUextra 26992201 26992316 -2012340 + Invader1_LTR LTR Gypsy 195 313 -110 1 790 21 0 0 0 chrUextra 26992558 26992579 -2012077 + AT_rich Low_complexity Low_complexity 1 21 0 1 790 1526 37 5 11 chrUextra 26992894 26993085 -2011571 - LSU-rRNA_Dme rRNA rRNA -3710 190 1 1 790 34 24 0 0 chrUextra 26993373 26993414 -2011242 + AT_rich Low_complexity Low_complexity 1 41 0 1 790 752 0 0 0 chrUextra 26993587 26993674 -2010982 + R2_DM LINE R2 3521 3607 0 1 790 4696 4 0 0 chrUextra 26993674 26994180 -2010476 + LSU-rRNA_Dme rRNA rRNA 2578 3083 -817 1 790 5116 2 19 0 chrUextra 26994280 26994873 -2009783 + ROO_I LTR Pao 285 888 -7368 1 790 1637 0 5 5 chrUextra 26994973 26995157 -2009499 - R1_DM LINE R1 -5171 185 2 1 790 3808 0 0 0 chrUextra 26995159 26995566 -2009090 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2226 1 790 1620 3 0 0 chrUextra 26995851 26996186 -2008470 + (TTCTC)n Simple_repeat Simple_repeat 1 335 0 1 790 516 16 0 0 chrUextra 26996198 26996259 -2008397 + (GAGAA)n Simple_repeat Simple_repeat 5 65 0 1 790 5387 0 0 2 chrUextra 26996359 26996952 -2007704 - ROO_I LTR Pao -2846 5410 4819 1 790 1763 87 4 0 chrUextra 26997052 26997283 -2007373 + DMCR1A LINE CR1 3289 3520 -950 1 790 2889 55 25 6 chrUextra 26997276 26997642 -2007014 + DMCR1A LINE CR1 3655 4027 -443 1 790 2064 196 29 66 chrUextra 26998440 26999031 -2005625 + TAHRE LINE telomeric 7053 7621 -2842 1 790 5111 27 0 2 chrUextra 26999132 26999724 -2004932 - DOC2_DM LINE Jockey -1236 3557 2967 1 790 1560 17 0 0 chrUextra 26999824 27000000 -2004656 - DMRT1B LINE R1 -833 4350 4175 1 790 3224 3 0 0 chrUextra 27000000 27000354 -2004302 - DMRT1B LINE R1 -1009 4174 3821 1 790 567 0 0 0 chrUextra 27000354 27000417 -2004239 + (CACAA)n Simple_repeat Simple_repeat 1 63 0 1 790 879 94 0 0 chrUextra 27000523 27000672 -2003984 + (CATGT)n Simple_repeat Simple_repeat 3 151 0 1 791 5464 2 0 0 chrUextra 27001210 27001803 -2002853 - R1_DM LINE R1 -1979 3377 2785 1 791 4805 29 72 0 chrUextra 27001903 27002484 -2002172 - R1_DM LINE R1 -1818 3538 2916 1 791 1201 0 7 0 chrUextra 27002597 27002738 -2001918 + Copia_LTR LTR Copia 135 276 0 1 791 2700 273 48 55 chrUextra 27002740 27003882 -2000774 - SAR_DM Satellite Satellite -411 1133 1 1 791 4671 6 6 6 chrUextra 27004043 27004575 -2000081 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1260 1 791 2255 217 8 14 chrUextra 27004676 27005268 -1999388 - SAR_DM Satellite Satellite -480 992 404 1 791 2541 176 22 6 chrUextra 27005368 27005912 -1998744 - SAR_DM Satellite Satellite -702 770 218 1 791 384 0 0 0 chrUextra 27005903 27005961 -1998695 - FW_DM LINE Jockey -2 4690 4633 1 791 456 170 69 10 chrUextra 27006211 27006312 -1998344 - Gypsy2_LTR LTR Gypsy -147 206 100 1 791 1230 116 152 67 chrUextra 27006336 27006651 -1998005 - DM297_LTR LTR Gypsy 0 414 73 1 791 2833 175 7 10 chrUextra 27006754 27007342 -1997314 + SAR_DM Satellite Satellite 462 1047 -425 1 791 1392 39 10 22 chrUextra 27007447 27008040 -1996616 + (TATAA)n Simple_repeat Simple_repeat 1 585 0 1 791 2967 15 84 0 chrUextra 27008140 27008648 -1996008 - DOC2_DM LINE Jockey -2809 1984 1434 1 791 612 25 12 0 chrUextra 27008652 27008733 -1995923 - DMRT1A LINE R1 0 5183 5102 1 791 5146 32 19 0 chrUextra 27008833 27009426 -1995230 - DIVER2_I LTR Pao -228 3919 3316 1 791 2723 94 30 12 chrUextra 27009526 27010118 -1994538 - DMSAT6 Satellite Satellite -130 603 1 1 791 2346 114 26 41 chrUextra 27010220 27010806 -1993850 + DMSAT6 Satellite Satellite 1 577 -97 1 791 2006 210 8 6 chrUextra 27010912 27011386 -1993270 + SAR_DM Satellite Satellite 541 1015 -457 1 791 964 35 0 0 chrUextra 27011389 27011505 -1993151 - ARS406_DM Unknown Unknown -189 164 49 1 791 2428 98 24 27 chrUextra 27011605 27012198 -1992458 + DMSAT6 Satellite Satellite 1 590 -108 1 791 28 48 0 0 chrUextra 27012305 27012347 -1992309 + AT_rich Low_complexity Low_complexity 1 42 0 1 791 532 119 36 0 chrUextra 27012621 27012705 -1991951 - NTS_DM Other Other -150 90 4 1 791 499 14 0 40 chrUextra 27012815 27012891 -1991765 - NTS_DM Other Other -78 162 90 1 791 2877 179 7 7 chrUextra 27012991 27013580 -1991076 - SAR_DM Satellite Satellite -602 870 282 1 791 2004 191 5 5 chrUextra 27013692 27014275 -1990381 - BATUMI_I LTR Pao -3165 4749 4091 1 791 2456 104 8 24 chrUextra 27014375 27014967 -1989689 + DMSAT6 Satellite Satellite 1 582 -79 1 791 533 85 37 0 chrUextra 27015071 27015153 -1989503 + FB4_DM DNA Tc1 329 413 -3676 1 791 514 112 0 48 chrUextra 27015118 27015202 -1989454 - Baggins1 LINE LOA -338 5115 5036 1 791 25 48 0 46 chrUextra 27015286 27015351 -1989305 + AT_rich Low_complexity Low_complexity 1 62 0 1 791 416 297 7 7 chrUextra 27016841 27016990 -1987666 + BURDOCK_I LTR Gypsy 850 998 -4862 1 791 2305 178 35 7 chrUextra 27017844 27018427 -1986229 + SAR_DM Satellite Satellite 1 599 -677 1 791 5130 14 0 2 chrUextra 27018527 27019119 -1985537 + MDG1_I LTR Gypsy 5457 6047 -549 1 791 430 41 0 0 chrUextra 27019249 27019298 -1985358 - Gypsy5_I LTR Gypsy -6460 49 1 1 791 3907 7 0 0 chrUextra 27019298 27019728 -1984928 - Gypsy5_LTR LTR Gypsy 0 430 1 1 791 741 12 0 0 chrUextra 27019728 27019811 -1984845 - Gypsy5_I LTR Gypsy 0 6509 6427 1 791 577 147 59 4 chrUextra 27019911 27020150 -1984506 + GA-rich Low_complexity Low_complexity 1 252 0 1 791 3023 0 0 6 chrUextra 27020168 27020503 -1984153 + Stalker2_LTR LTR Gypsy 1 333 -91 1 791 828 24 31 31 chrUextra 27020603 27020731 -1983925 + NTS_DM Other Other 113 240 0 1 791 1975 4 17 13 chrUextra 27020731 27020970 -1983686 + NTS_DM Other Other 1 240 0 1 791 1857 5 13 13 chrUextra 27020970 27021194 -1983462 + NTS_DM Other Other 1 224 -16 1 791 561 332 39 39 chrUextra 27021330 27021715 -1982941 + NOMAD_I LTR Gypsy 6178 6562 -10 1 791 2762 75 12 24 chrUextra 27021988 27022579 -1982077 + DMSAT6 Satellite Satellite 1 584 -29 1 791 1646 74 41 0 chrUextra 27022697 27022939 -1981717 - DM297_I LTR Gypsy -2234 3933 3682 1 791 2648 45 34 0 chrUextra 27022918 27023271 -1981385 - DM297_I LTR Gypsy -2023 4144 3780 1 791 2837 80 5 0 chrUextra 27023385 27023762 -1980894 + STALKER4_LTR LTR Gypsy 1 379 -23 1 791 2720 90 27 10 chrUextra 27024070 27024655 -1980001 - DMSAT6 Satellite Satellite -52 595 1 1 791 2396 95 7 93 chrUextra 27024755 27025347 -1979309 - DMSAT6 Satellite Satellite -78 540 1 1 791 3048 169 8 3 chrUextra 27025447 27026039 -1978617 + SAR_DM Satellite Satellite 267 861 -611 1 791 5350 7 0 0 chrUextra 27026139 27026731 -1977925 + DOC2_DM LINE Jockey 2604 3195 -1598 1 791 3478 153 6 2 chrUextra 27026831 27027380 -1977276 + IDEFIX_I LTR Gypsy 937 1487 -4141 1 791 305 75 0 0 chrUextra 27027382 27027422 -1977234 + IDEFIX_I LTR Gypsy 1726 1765 -3863 1 791 1574 39 0 0 chrUextra 27027523 27027705 -1976951 + R1_DM LINE R1 1662 1843 -3513 1 791 3658 22 0 0 chrUextra 27027699 27028115 -1976541 + R1_DM LINE R1 2087 2502 -2854 1 791 2536 190 14 17 chrUextra 27028215 27028799 -1975857 + SAR_DM Satellite Satellite 463 1044 -428 1 791 2520 98 2 31 chrUextra 27028907 27029499 -1975157 - DMSAT6 Satellite Satellite -141 574 1 1 791 2984 172 7 7 chrUextra 27029599 27030191 -1974465 + SAR_DM Satellite Satellite 256 847 -625 1 791 2563 117 91 116 chrUextra 27030291 27030862 -1973794 - TART LINE telomeric -6936 7541 6985 1 791 792 12 0 0 chrUextra 27031007 27031093 -1973563 - ROO_I LTR Pao -8170 86 1 1 791 4017 0 0 0 chrUextra 27031093 27031521 -1973135 - ROO_LTR LTR Pao 0 428 1 1 791 502 18 0 0 chrUextra 27031521 27031575 -1973081 - R1_DM LINE R1 -431 4925 4872 1 791 1697 238 27 34 chrUextra 27031675 27032262 -1972394 - SAR_DM Satellite Satellite -722 750 168 1 791 1517 6 0 0 chrUextra 27032367 27032531 -1972125 - R1_DM LINE R1 -390 4966 4803 1 791 3981 2 5 0 chrUextra 27032528 27032959 -1971697 - LSU-rRNA_Dme rRNA rRNA -1241 2659 2227 1 791 5181 8 2 2 chrUextra 27033059 27033651 -1971005 + STALKER4_I LTR Gypsy 4625 5216 -1314 1 791 2721 80 12 35 chrUextra 27033774 27034343 -1970313 - DMSAT6 Satellite Satellite 0 556 1 1 791 4927 15 69 5 chrUextra 27034443 27035035 -1969621 + STALKER4_I LTR Gypsy 4204 4833 -1697 1 791 242 160 39 20 chrUextra 27035135 27035186 -1969470 + G5_DM LINE Jockey 1819 1870 -2986 1 791 5000 16 12 0 chrUextra 27035165 27035727 -1968929 + G5_DM LINE Jockey 2604 3172 -1684 1 791 2714 185 8 8 chrUextra 27035831 27036419 -1968237 + SAR_DM Satellite Satellite 218 805 -667 1 791 5279 3 0 2 chrUextra 27036520 27037094 -1967562 - LSU-rRNA_Dme rRNA rRNA -1540 2360 1788 1 791 4938 8 40 2 chrUextra 27037211 27037803 -1966853 + QUASIMODO_I LTR Gypsy 3729 4343 -1717 1 791 2423 118 12 40 chrUextra 27037904 27038472 -1966184 + DMSAT6 Satellite Satellite 1 552 -84 1 791 1206 0 0 0 chrUextra 27038595 27038726 -1965930 - LSU-rRNA_Dme rRNA rRNA -3769 131 1 1 791 34 24 0 0 chrUextra 27039014 27039055 -1965601 + AT_rich Low_complexity Low_complexity 1 41 0 1 791 298 264 0 21 chrUextra 27039291 27039384 -1965272 - GTWIN_I LTR Gypsy -2997 3424 3334 1 791 282 196 0 0 chrUextra 27039376 27039432 -1965224 - DM297_I LTR Gypsy -3740 2427 2372 1 791 783 52 0 0 chrUextra 27039979 27040076 -1964580 - R1_DM LINE R1 -507 4849 4753 1 791 3879 48 0 18 chrUextra 27040077 27040571 -1964085 + R1_DM LINE R1 409 893 -4463 1 791 1011 26 0 0 chrUextra 27040678 27040794 -1963862 - CIRCE LINE Composite -4813 1543 1428 1 791 692 92 20 10 chrUextra 27040794 27040893 -1963763 + STALKER4_LTR LTR Gypsy 280 379 -23 1 791 25 0 0 0 chrUextra 27041007 27041032 -1963624 + AT_rich Low_complexity Low_complexity 1 25 0 1 791 901 218 5 5 chrUextra 27041056 27041263 -1963393 + Stalker2_I LTR Gypsy 291 497 -6905 1 791 2978 159 10 10 chrUextra 27041363 27041955 -1962701 + SAR_DM Satellite Satellite 267 858 -614 1 791 23 33 0 0 chrUextra 27042080 27042110 -1962546 + AT_rich Low_complexity Low_complexity 1 30 0 1 791 515 24 44 67 chrUextra 27042747 27042837 -1961819 + ROO_I LTR Pao 542 629 -7627 1 791 327 136 0 0 chrUextra 27042843 27042902 -1961754 + (CAG)n Simple_repeat Simple_repeat 1 59 0 1 791 506 45 0 0 chrUextra 27042902 27042969 -1961687 + ROO_I LTR Pao 730 796 -7460 1 791 3276 145 31 5 chrUextra 27043439 27044021 -1960635 - TART LINE telomeric -4931 9546 8950 1 791 929 97 16 44 chrUextra 27044131 27044497 -1960159 + GA-rich Low_complexity Low_complexity 1 356 0 1 791 5401 0 3 2 chrUextra 27044826 27045415 -1959241 + SSU-rRNA_Dme rRNA rRNA 638 1227 -768 1 791 2657 158 18 8 chrUextra 27045522 27046032 -1958624 + SAR_DM Satellite Satellite 400 914 -558 1 791 597 53 0 0 chrUextra 27046029 27046105 -1958551 - ARS406_DM Unknown Unknown -195 158 83 1 791 1538 34 0 6 chrUextra 27046206 27046688 -1957968 + (TATAA)n Simple_repeat Simple_repeat 1 478 0 1 791 734 41 10 0 chrUextra 27046699 27046797 -1957859 + (GAGAA)n Simple_repeat Simple_repeat 5 103 0 1 791 1668 178 16 28 chrUextra 27046898 27047488 -1957168 - SAR_DM Satellite Satellite -627 582 1 1 791 2637 196 7 7 chrUextra 27048279 27048870 -1955786 + SAR_DM Satellite Satellite 464 1054 -418 1 791 5419 2 0 2 chrUextra 27049661 27050252 -1954404 - R1_DM LINE R1 -1566 3790 3201 1 791 2807 171 12 12 chrUextra 27050352 27050943 -1953713 + SAR_DM Satellite Satellite 464 1054 -418 1 791 4848 37 2 24 chrUextra 27051734 27052321 -1952335 + Baggins1 LINE LOA 4880 5453 0 1 791 2644 101 16 9 chrUextra 27052438 27053016 -1951640 + DMSAT6 Satellite Satellite 1 581 0 1 791 5357 12 0 0 chrUextra 27053116 27053707 -1950949 + DMRT1B LINE R1 1709 2299 -2884 1 791 2596 180 27 14 chrUextra 27053807 27054393 -1950263 - SAR_DM Satellite Satellite -667 805 212 1 791 1258 0 0 0 chrUextra 27054510 27054645 -1950011 + 5S_DM RNA RNA 1 135 0 1 791 1258 0 0 0 chrUextra 27054876 27055011 -1949645 + 5S_DM RNA RNA 1 135 0 1 791 999 75 7 18 chrUextra 27055189 27055780 -1948876 + RSP Satellite Satellite 1 584 0 1 791 986 78 8 19 chrUextra 27055882 27056395 -1948261 + RSP Satellite Satellite 1 507 0 1 791 2725 182 10 9 chrUextra 27056571 27057152 -1947504 - SAR_DM Satellite Satellite -673 799 218 1 791 533 77 13 0 chrUextra 27057084 27057162 -1947494 + ARS406_DM Unknown Unknown 1 79 -274 1 791 1620 0 0 0 chrUextra 27057262 27057516 -1947140 + (GAGAA)n Simple_repeat Simple_repeat 1 254 0 1 791 5343 0 0 5 chrUextra 27058644 27059235 -1945421 + R1_DM LINE R1 2742 3329 -2027 1 791 2592 107 9 34 chrUextra 27059342 27059926 -1944730 + DMSAT6 Satellite Satellite 1 568 -3 1 791 2755 183 29 7 chrUextra 27060026 27060616 -1944040 - SAR_DM Satellite Satellite -544 928 326 1 791 1444 6 0 6 chrUextra 27060717 27060885 -1943771 - NTS_DM Other Other -73 167 1 1 791 1986 0 17 13 chrUextra 27060885 27061124 -1943532 - NTS_DM Other Other 0 240 1 1 791 1408 6 22 16 chrUextra 27061124 27061308 -1943348 - NTS_DM Other Other 0 240 56 1 791 34 24 0 0 chrUextra 27062434 27062475 -1942181 + AT_rich Low_complexity Low_complexity 1 41 0 1 791 5163 30 0 0 chrUextra 27063481 27064072 -1940584 + R1_DM LINE R1 2775 3365 -1991 1 791 2121 169 22 12 chrUextra 27064864 27065351 -1939305 + SAR_DM Satellite Satellite 1 596 -596 1 791 839 39 0 0 chrUextra 27065351 27065454 -1939202 - ARS406_DM Unknown Unknown -164 189 87 1 791 1041 93 0 0 chrUextra 27065555 27065884 -1938772 + (ACATG)n Simple_repeat Simple_repeat 1 329 0 1 791 2386 200 8 15 chrUextra 27066245 27066834 -1937822 - SAR_DM Satellite Satellite -683 789 205 1 791 742 19 36 27 chrUextra 27066936 27067046 -1937610 + NTS_DM Other Other 130 240 0 1 791 1388 6 0 18 chrUextra 27067046 27067211 -1937445 + NTS_DM Other Other 1 162 -78 1 791 532 119 36 0 chrUextra 27067321 27067405 -1937251 + NTS_DM Other Other 4 90 -150 1 791 1620 0 0 0 chrUextra 27068034 27068214 -1936442 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 1 791 5457 0 0 0 chrUextra 27068318 27068909 -1935747 + ROO_I LTR Pao 1999 2589 -5667 1 791 2731 84 12 14 chrUextra 27069009 27069600 -1935056 - DMSAT6 Satellite Satellite -90 590 1 1 791 5239 17 0 0 chrUextra 27069700 27070291 -1934365 - BARI_DM DNA Tc1 -818 910 320 1 791 5340 2 15 0 chrUextra 27071082 27071673 -1932983 + BARI_DM DNA Tc1 1033 1632 -96 1 791 2902 162 12 9 chrUextra 27071777 27072351 -1932305 - SAR_DM Satellite Satellite -526 946 371 1 791 3830 56 41 19 chrUextra 27072474 27073055 -1931601 - BATUMI_I LTR Pao -7270 693 100 1 791 1409 190 5 3 chrUextra 27073849 27074437 -1930219 + SAR_DM Satellite Satellite 1 588 -678 1 791 2851 74 69 0 chrUextra 27074540 27074917 -1929739 - Gypsy12_I LTR Gypsy -679 4867 4465 1 791 1572 117 0 0 chrUextra 27074914 27075128 -1929528 - Gypsy12_I LTR Gypsy -3725 1821 1608 1 791 2695 181 19 10 chrUextra 27075228 27075819 -1928837 + SAR_DM Satellite Satellite 427 1022 -450 1 791 2855 168 19 7 chrUextra 27075920 27076506 -1928150 - SAR_DM Satellite Satellite -587 885 293 1 791 450 0 0 0 chrUextra 27076609 27076659 -1927997 + (CAGCG)n Simple_repeat Simple_repeat 1 50 0 1 791 1620 37 0 0 chrUextra 27076659 27077197 -1927459 + (CACAA)n Simple_repeat Simple_repeat 1 538 0 1 791 1086 31 0 0 chrUextra 27077321 27077451 -1927205 + (GAGAA)n Simple_repeat Simple_repeat 2 131 0 1 791 973 70 3 19 chrUextra 27077999 27078579 -1926077 - RSP Satellite Satellite 0 571 1 1 791 2472 99 19 27 chrUextra 27078679 27079263 -1925393 + DMSAT6 Satellite Satellite 1 578 -74 1 791 805 11 0 0 chrUextra 27079369 27079458 -1925198 + BLASTOPIA_I LTR Gypsy 4393 4481 0 1 791 2281 18 7 11 chrUextra 27079458 27079734 -1924922 + BLASTOPIA_LTR LTR Gypsy 1 275 0 1 791 1158 122 0 0 chrUextra 27079736 27079958 -1924698 + (TA)n Simple_repeat Simple_repeat 1 222 0 1 791 2847 175 7 15 chrUextra 27080059 27080646 -1924010 + SAR_DM Satellite Satellite 298 879 -593 1 791 2393 179 20 17 chrUextra 27080749 27081338 -1923318 - SAR_DM Satellite Satellite -873 591 1 1 791 2624 101 10 24 chrUextra 27081449 27082026 -1922630 + DMSAT6 Satellite Satellite 1 568 -3 1 791 1289 33 22 22 chrUextra 27082819 27083004 -1921652 + NTS_DM Other Other 56 240 0 1 791 1838 25 17 17 chrUextra 27083004 27083244 -1921412 + NTS_DM Other Other 1 240 0 1 791 1334 30 0 6 chrUextra 27083244 27083409 -1921247 + NTS_DM Other Other 1 164 -76 1 791 1013 83 3 17 chrUextra 27083512 27084099 -1920557 - RSP Satellite Satellite -27 579 1 1 791 339 89 0 0 chrUextra 27084205 27084261 -1920395 + (CATGT)n Simple_repeat Simple_repeat 1 56 0 1 791 5433 0 2 0 chrUextra 27084889 27085479 -1919177 - R1_DM LINE R1 -3145 2211 1621 1 791 276 155 26 90 chrUextra 27085658 27085736 -1918920 - BS3_DM LINE Jockey -7 1783 1711 1 791 3654 3 0 0 chrUextra 27085777 27086169 -1918487 + LINEJ1_DM LINE Jockey 4432 4823 -197 1 791 2991 163 10 8 chrUextra 27086269 27086857 -1917799 - SAR_DM Satellite Satellite -515 957 369 1 791 5403 0 0 2 chrUextra 27086959 27087549 -1917107 + R1_DM LINE R1 1319 1907 -3449 1 791 2582 158 10 62 chrUextra 27087649 27088902 -1915754 - DMSAT6 Satellite Satellite -118 1188 1 1 791 2515 80 19 58 chrUextra 27089051 27089618 -1915038 + DMSAT6 Satellite Satellite 1 544 0 1 791 3687 0 2 0 chrUextra 27089719 27090113 -1914543 + SSU-rRNA_Dme rRNA rRNA 1601 1995 0 1 791 21 89 0 0 chrUextra 27090132 27090188 -1914468 + AT_rich Low_complexity Low_complexity 1 56 0 1 791 1619 6 6 0 chrUextra 27090409 27090587 -1914069 - LSU-rRNA_Dme rRNA rRNA -1082 2818 2640 1 791 3647 10 0 0 chrUextra 27090585 27090984 -1913672 - R1_DM LINE R1 0 5356 4958 1 791 2582 184 14 12 chrUextra 27091099 27091689 -1912967 + SAR_DM Satellite Satellite 209 799 -673 1 791 1620 0 0 0 chrUextra 27092479 27092763 -1911893 + (GAGAA)n Simple_repeat Simple_repeat 1 284 0 1 791 4527 95 0 0 chrUextra 27093169 27093759 -1910897 + Gypsy12_I LTR Gypsy 2696 3285 -2261 1 791 5188 22 0 0 chrUextra 27093859 27094449 -1910207 + NINJA_I LTR Pao 772 1361 -4650 1 791 1212 28 0 0 chrUextra 27094552 27094696 -1909960 + (CTTAT)n Simple_repeat Simple_repeat 4 147 0 1 791 2750 161 48 14 chrUextra 27095244 27095829 -1908827 - SAR_DM Satellite Satellite -514 958 354 1 791 5220 8 3 0 chrUextra 27095929 27096519 -1908137 + HETA LINE telomeric 3868 4459 -1622 1 791 300 0 100 0 chrUextra 27096619 27096679 -1907977 + (CATAG)n Simple_repeat Simple_repeat 5 70 0 1 791 1620 0 0 9 chrUextra 27096679 27097004 -1907652 + (TAGA)n Simple_repeat Simple_repeat 1 322 0 1 791 225 0 0 0 chrUextra 27097004 27097029 -1907627 + (CGATA)n Simple_repeat Simple_repeat 1 25 0 1 791 1571 0 0 6 chrUextra 27097029 27097209 -1907447 + (CGAT)n Simple_repeat Simple_repeat 1 179 0 1 791 2619 91 19 8 chrUextra 27097309 27097896 -1906760 - DMSAT6 Satellite Satellite -79 593 1 1 791 2966 49 58 44 chrUextra 27097999 27098449 -1906207 + DM176_LTR LTR Gypsy 24 479 -28 1 791 402 245 0 0 chrUextra 27098475 27098577 -1906079 - DM176_LTR LTR Gypsy 0 507 406 1 791 2533 172 11 10 chrUextra 27099378 27099901 -1904755 - SAR_DM Satellite Satellite -550 922 399 1 791 331 22 22 0 chrUextra 27099921 27099966 -1904690 + SAR_DM Satellite Satellite 371 416 -1056 1 791 1222 57 39 11 chrUextra 27100067 27100245 -1904411 + IDEFIX_LTR LTR Gypsy 412 594 0 1 791 25 0 0 0 chrUextra 27100436 27100461 -1904195 + AT_rich Low_complexity Low_complexity 1 25 0 1 791 5474 2 2 0 chrUextra 27100756 27101345 -1903311 + SSU-rRNA_Dme rRNA rRNA 1313 1902 -93 1 791 2638 176 14 24 chrUextra 27102826 27103408 -1901248 - SAR_DM Satellite Satellite -361 1111 536 1 791 279 125 236 0 chrUextra 27103694 27104101 -1900555 + (CTAAA)n Simple_repeat Simple_repeat 1 503 0 1 791 1164 45 0 0 chrUextra 27104890 27105045 -1899611 + (TAGA)n Simple_repeat Simple_repeat 2 156 0 1 791 1335 50 0 0 chrUextra 27105045 27105224 -1899432 + (ATCG)n Simple_repeat Simple_repeat 1 180 0 1 791 1281 72 0 0 chrUextra 27105227 27105477 -1899179 + (TAGA)n Simple_repeat Simple_repeat 1 250 0 1 791 1697 68 34 8 chrUextra 27105579 27105815 -1898841 + IDEFIX_I LTR Gypsy 2373 2614 -3014 1 791 1422 86 22 14 chrUextra 27105805 27106028 -1898628 + IDEFIX_I LTR Gypsy 3227 3451 -2177 1 791 1004 81 13 7 chrUextra 27106019 27106168 -1898488 + IDEFIX_I LTR Gypsy 3677 3826 -1802 1 791 2885 169 10 10 chrUextra 27106277 27106857 -1897799 + SAR_DM Satellite Satellite 427 1006 -466 1 791 2676 160 16 19 chrUextra 27107646 27108924 -1895732 - DMSAT6 Satellite Satellite -87 1274 1 1 791 558 0 0 0 chrUextra 27109024 27109086 -1895570 + (GAGAA)n Simple_repeat Simple_repeat 4 65 0 1 791 2616 91 20 28 chrUextra 27109756 27110300 -1894356 + DMSAT6 Satellite Satellite 1 539 0 1 791 2876 162 14 5 chrUextra 27110423 27110988 -1893668 + SAR_DM Satellite Satellite 326 895 -577 1 791 2856 174 8 10 chrUextra 27111092 27111680 -1892976 - SAR_DM Satellite Satellite -549 923 337 1 791 5085 34 0 0 chrUextra 27111780 27112369 -1892287 + R1_DM LINE R1 2754 3342 -2014 1 791 2756 82 7 33 chrUextra 27112474 27113058 -1891598 + DMSAT6 Satellite Satellite 1 568 -147 1 791 1649 167 14 7 chrUextra 27113159 27113747 -1890909 - SAR_DM Satellite Satellite -645 591 1 1 791 5319 2 5 3 chrUextra 27113847 27114436 -1890220 + LSU-rRNA_Dme rRNA rRNA 1085 1674 -2226 1 791 2641 90 25 15 chrUextra 27114536 27115125 -1889531 + DMSAT6 Satellite Satellite 1 595 -69 1 791 23 33 0 0 chrUextra 27116356 27116386 -1888270 + AT_rich Low_complexity Low_complexity 1 30 0 1 791 2510 175 39 29 chrUextra 27116604 27117192 -1887464 - SAR_DM Satellite Satellite -371 1101 508 1 791 1774 10 0 0 chrUextra 27117303 27117501 -1887155 - Copia2_LTR_DM LTR Copia 0 198 1 1 791 311 60 19 74 chrUextra 27117584 27117638 -1887018 + G4_DM LINE Jockey 1817 1867 -1989 1 791 2689 182 19 7 chrUextra 27117981 27118566 -1886090 + SAR_DM Satellite Satellite 304 895 -577 1 791 3744 50 45 3 chrUextra 27118670 27119259 -1885397 - PROTOP_A DNA P -10 1095 570 1 791 3339 20 3 0 chrUextra 27119359 27119749 -1884907 + FW_DM LINE Jockey 4300 4690 -2 1 791 1311 149 23 0 chrUextra 27119734 27119948 -1884708 + ROVER-I_DM LTR Gypsy 3757 3975 -2609 1 791 1949 0 5 0 chrUextra 27120737 27120947 -1883709 + SSU-rRNA_Dme rRNA rRNA 1785 1995 0 1 791 21 89 0 0 chrUextra 27120966 27121022 -1883634 + AT_rich Low_complexity Low_complexity 1 56 0 1 791 5464 0 0 2 chrUextra 27121426 27122015 -1882641 + LSU-rRNA_Dme rRNA rRNA 2673 3260 -640 1 791 2556 98 17 24 chrUextra 27122115 27122704 -1881952 - DMSAT6 Satellite Satellite -3 584 1 1 791 2202 143 8 8 chrUextra 27122804 27123157 -1881499 + Gypsy12_I LTR Gypsy 5194 5546 0 1 791 1464 131 5 0 chrUextra 27123157 27123379 -1881277 + Gypsy12A_LTR LTR Gypsy 1 223 -2057 1 791 5272 2 5 5 chrUextra 27123493 27124082 -1880574 + LSU-rRNA_Dme rRNA rRNA 1116 1704 -2196 1 791 2546 91 25 32 chrUextra 27124183 27124747 -1879909 - DMSAT6 Satellite Satellite -92 559 1 1 791 3597 2 0 2 chrUextra 27124871 27125279 -1879377 + POGO DNA Pogo 1706 2112 -9 1 791 1181 78 0 6 chrUextra 27125279 27125459 -1879197 + (TATTG)n Simple_repeat Simple_repeat 1 179 0 1 791 5275 2 0 0 chrUextra 27125562 27126149 -1878507 - ROO_I LTR Pao -3243 5013 4427 1 791 357 24 0 0 chrUextra 27126938 27126980 -1877676 + (TTCTC)n Simple_repeat Simple_repeat 3 44 0 1 791 963 0 0 0 chrUextra 27128314 27128421 -1876235 + (CAAGA)n Simple_repeat Simple_repeat 5 111 0 1 791 5258 8 0 5 chrUextra 27129002 27129590 -1875066 + LSU-rRNA_Dme rRNA rRNA 749 1333 -2567 1 791 2533 103 30 9 chrUextra 27129693 27130277 -1874379 + DMSAT6 Satellite Satellite 1 596 -15 1 791 5352 2 2 3 chrUextra 27130378 27130966 -1873690 + LSU-rRNA_Dme rRNA rRNA 754 1340 -2560 1 791 2909 168 10 10 chrUextra 27131066 27131654 -1873002 - SAR_DM Satellite Satellite -470 1002 415 1 98 2410 131 9 35 chrUextra 27131773 27132342 -1872314 + DMSAT6 Satellite Satellite 1 553 -3 1 792 2573 167 44 18 chrUextra 27133130 27133702 -1870954 - SAR_DM Satellite Satellite -565 907 321 1 792 1799 64 4 0 chrUextra 27133841 27134074 -1870582 + MDG3_LTR LTR Gypsy 34 267 0 1 792 2269 85 15 12 chrUextra 27134074 27134406 -1870250 + TART LINE telomeric 9689 10021 -4456 1 792 2831 176 10 7 chrUextra 27134510 27135094 -1869562 + SAR_DM Satellite Satellite 246 831 -641 1 792 1801 140 4 0 chrUextra 27135882 27136160 -1868496 - HMSBEAGLE_I LTR Gypsy -826 5703 5425 1 792 2259 108 0 0 chrUextra 27136164 27136470 -1868186 - HMSBEAGLE_I LTR Gypsy -1344 5185 4880 1 792 5015 34 39 0 chrUextra 27136570 27137158 -1867498 + CIRCE LINE Composite 5654 6264 -92 1 792 1013 65 7 22 chrUextra 27137258 27137793 -1866863 + RSP Satellite Satellite 1 527 0 1 792 2810 176 9 3 chrUextra 27137951 27138517 -1866139 - SAR_DM Satellite Satellite -578 894 326 1 792 25 0 0 0 chrUextra 27139154 27139179 -1865477 + AT_rich Low_complexity Low_complexity 1 25 0 1 792 2643 176 11 11 chrUextra 27139322 27139878 -1864778 + SAR_DM Satellite Satellite 434 989 -483 1 792 2514 202 22 5 chrUextra 27140011 27140594 -1864062 - SAR_DM Satellite Satellite -455 1017 425 1 792 5288 0 20 0 chrUextra 27140698 27141286 -1863370 + DOC LINE Jockey 884 1483 -3242 1 792 4977 26 2 0 chrUextra 27141386 27141960 -1862696 - NINJA_I LTR Pao -1402 4609 4035 1 792 1629 14 19 19 chrUextra 27142074 27142287 -1862369 + NTS_DM Other Other 28 240 0 1 792 1880 17 17 17 chrUextra 27142287 27142527 -1862129 + NTS_DM Other Other 1 240 0 1 792 1176 22 0 0 chrUextra 27142527 27142662 -1861994 + NTS_DM Other Other 1 135 -105 1 792 446 0 62 46 chrUextra 27142762 27142827 -1861829 + NTS_DM Other Other 175 240 0 1 792 1869 21 17 17 chrUextra 27142827 27143067 -1861589 + NTS_DM Other Other 1 240 0 1 792 1880 17 17 17 chrUextra 27143067 27143307 -1861349 + NTS_DM Other Other 1 240 0 1 792 384 23 0 0 chrUextra 27143307 27143350 -1861306 + NTS_DM Other Other 1 43 -197 1 792 2580 111 15 12 chrUextra 27143451 27144037 -1860619 + DMSAT6 Satellite Satellite 1 587 -155 1 792 2541 104 22 14 chrUextra 27144139 27144725 -1859931 - DMSAT6 Satellite Satellite -90 590 1 1 792 2609 81 12 62 chrUextra 27144826 27145411 -1859245 + DMSAT6 Satellite Satellite 1 555 -62 1 792 5386 0 3 3 chrUextra 27146202 27146790 -1857866 + SSU-rRNA_Dme rRNA rRNA 765 1352 -643 1 792 379 9 0 134 chrUextra 27146890 27147017 -1857639 + (TTTTTA)n Simple_repeat Simple_repeat 3 112 0 1 792 1624 244 44 65 chrUextra 27147596 27148166 -1856490 + Gypsy12_LTR LTR Gypsy 309 866 -1470 1 792 5241 19 0 0 chrUextra 27148266 27148854 -1855802 - R1_DM LINE R1 -2869 2487 1900 1 792 2490 181 10 29 chrUextra 27149642 27150228 -1854428 + SAR_DM Satellite Satellite 516 1090 -382 1 792 5449 2 3 0 chrUextra 27150330 27150918 -1853738 - LSU-rRNA_Dme rRNA rRNA -74 3826 3237 1 792 2677 184 12 7 chrUextra 27151023 27151599 -1853057 + SAR_DM Satellite Satellite 371 949 -523 1 792 4612 0 5 80 chrUextra 27151706 27152294 -1852362 + LSU-rRNA_Dme rRNA rRNA 1298 1841 -2059 1 792 5238 20 0 0 chrUextra 27153082 27153670 -1850986 + R1_DM LINE R1 1922 2509 -2847 1 792 968 39 0 0 chrUextra 27153912 27154039 -1850617 + G2_DM LINE Jockey 2972 3098 -4 1 792 5111 24 0 8 chrUextra 27154458 27155045 -1849611 + Gypsy3_I LTR Gypsy 3000 3581 -2596 1 792 2104 162 39 25 chrUextra 27155145 27155732 -1848924 + SAR_DM Satellite Satellite 1 594 -378 1 792 2563 185 27 14 chrUextra 27155832 27156419 -1848237 - SAR_DM Satellite Satellite -640 832 238 1 792 5338 12 2 0 chrUextra 27156519 27157106 -1847550 + DOC2_DM LINE Jockey 2242 2829 -1964 1 792 2731 182 14 5 chrUextra 27157212 27157793 -1846863 + SAR_DM Satellite Satellite 229 814 -658 1 792 2420 10 61 0 chrUextra 27157893 27158188 -1846468 - IDEFIX_LTR LTR Gypsy -281 313 1 1 792 1672 59 36 36 chrUextra 27158188 27158480 -1846176 - BATUMI_I LTR Pao -7291 672 381 1 792 520 139 55 18 chrUextra 27158612 27158838 -1845818 + CT-rich Low_complexity Low_complexity 1 234 0 1 792 568 156 60 3 chrUextra 27158858 27159166 -1845490 + CT-rich Low_complexity Low_complexity 1 325 0 1 792 2213 233 10 5 chrUextra 27159267 27159854 -1844802 - SAR_DM Satellite Satellite -684 788 199 1 792 5315 10 2 0 chrUextra 27159954 27160541 -1844115 - R1_DM LINE R1 -418 4938 4351 1 792 1307 68 0 5 chrUextra 27160644 27160867 -1843789 + (CAAGA)n Simple_repeat Simple_repeat 1 221 0 1 792 5363 2 0 2 chrUextra 27161328 27161915 -1842741 + R1_DM LINE R1 3055 3640 -1716 1 792 32 0 0 0 chrUextra 27162255 27162287 -1842369 + AT_rich Low_complexity Low_complexity 1 32 0 1 792 1635 11 6 0 chrUextra 27162419 27162602 -1842054 + SSU-rRNA_Dme rRNA rRNA 1 184 -1811 1 792 5375 0 0 2 chrUextra 27162702 27163289 -1841367 - R1_DM LINE R1 -3425 1931 1346 1 792 1924 0 0 0 chrUextra 27163389 27163593 -1841063 + SSU-rRNA_Dme rRNA rRNA 1792 1995 0 1 792 21 89 0 0 chrUextra 27163612 27163668 -1840988 + AT_rich Low_complexity Low_complexity 1 56 0 1 792 2311 189 30 26 chrUextra 27164076 27164647 -1840009 + SAR_DM Satellite Satellite 546 1118 -354 1 792 301 167 59 59 chrUextra 27164561 27164663 -1839993 - XDMR_DM Unknown Unknown 0 360 259 1 792 951 0 0 0 chrUextra 27164763 27164864 -1839792 - LSU-rRNA_Dme rRNA rRNA -2012 1888 1788 1 792 3952 5 5 5 chrUextra 27164905 27165350 -1839306 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1347 1 792 2784 162 30 14 chrUextra 27166142 27166718 -1837938 + SAR_DM Satellite Satellite 353 937 -535 1 792 999 90 7 17 chrUextra 27166824 27167411 -1837245 + RSP Satellite Satellite 1 581 0 1 792 2270 107 10 41 chrUextra 27167511 27168097 -1836559 + DMSAT6 Satellite Satellite 1 567 -130 1 792 1148 78 11 0 chrUextra 27168198 27168560 -1836096 + (CTATT)n Simple_repeat Simple_repeat 1 366 0 1 792 216 67 0 0 chrUextra 27168572 27168602 -1836054 + (TTATA)n Simple_repeat Simple_repeat 4 33 0 1 792 1277 56 6 0 chrUextra 27168602 27168781 -1835875 + (CTATT)n Simple_repeat Simple_repeat 1 180 0 1 792 2004 200 44 7 chrUextra 27168885 27169449 -1835207 - SAR_DM Satellite Satellite -555 917 333 1 792 2326 97 14 48 chrUextra 27170259 27170845 -1833811 + DMSAT6 Satellite Satellite 1 566 -97 1 792 4554 7 2 10 chrUextra 27170950 27171533 -1833123 - MAX_I LTR Pao -6871 1043 466 1 792 1212 17 27 22 chrUextra 27171633 27171818 -1832838 + NTS_DM Other Other 55 240 0 1 792 1850 4 17 13 chrUextra 27171818 27172057 -1832599 + NTS_DM Other Other 1 240 0 1 792 1350 6 0 0 chrUextra 27172057 27172220 -1832436 + NTS_DM Other Other 1 163 -77 1 792 4088 38 9 0 chrUextra 27172333 27172867 -1831789 + DOC2_DM LINE Jockey 364 902 -3891 1 792 2361 108 17 17 chrUextra 27173007 27173590 -1831066 - DMSAT6 Satellite Satellite -23 582 1 1 792 2496 164 14 12 chrUextra 27173694 27174256 -1830400 + SAR_DM Satellite Satellite 514 1076 -396 1 792 834 165 6 0 chrUextra 27174382 27174552 -1830104 + SAR_DM Satellite Satellite 616 786 -686 1 792 2395 92 24 15 chrUextra 27175071 27175655 -1829001 + DMSAT6 Satellite Satellite 1 588 -152 1 792 4876 12 0 0 chrUextra 27175755 27176330 -1828326 + DMRT1B LINE R1 1947 2521 -2662 1 792 4570 16 56 14 chrUextra 27176442 27177029 -1827627 + FW_DM LINE Jockey 1797 2408 -2284 1 792 2333 179 17 17 chrUextra 27177132 27177713 -1826943 + SAR_DM Satellite Satellite 481 1061 -411 1 792 2649 57 6 0 chrUextra 27177816 27178170 -1826486 + TART LINE telomeric 2119 2474 -12003 1 792 1352 85 10 0 chrUextra 27178169 27178370 -1826286 - TART LINE telomeric -6495 7982 7780 1 792 2427 171 14 27 chrUextra 27178503 27179087 -1825569 + SAR_DM Satellite Satellite 536 1111 -361 1 792 1559 6 0 0 chrUextra 27179877 27180056 -1824600 + LSU-rRNA_Dme rRNA rRNA 3722 3900 0 1 792 22 56 0 0 chrUextra 27180128 27180164 -1824492 + AT_rich Low_complexity Low_complexity 1 36 0 1 792 235 175 0 0 chrUextra 27180169 27180209 -1824447 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 792 246 150 0 0 chrUextra 27180261 27180301 -1824355 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 792 246 150 0 0 chrUextra 27180353 27180393 -1824263 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 792 4929 2 5 3 chrUextra 27180566 27181151 -1823505 + LSU-rRNA_Dme rRNA rRNA 1172 1757 -2143 1 792 4980 10 0 0 chrUextra 27181251 27181835 -1822821 - Gypsy4_I LTR Gypsy -3934 2354 1771 1 792 597 6 0 136 chrUextra 27181939 27182145 -1822511 + (TAAAAA)n Simple_repeat Simple_repeat 2 179 0 1 792 555 87 22 92 chrUextra 27182108 27182404 -1822252 + A-rich Low_complexity Low_complexity 1 275 0 1 792 4925 19 3 0 chrUextra 27182625 27183212 -1821444 - Copia2_I LTR Copia -1690 2472 1884 1 792 4480 14 0 2 chrUextra 27183312 27183899 -1820757 + DM176_I LTR Gypsy 5728 6313 -107 1 792 364 217 106 0 chrUextra 27184798 27185193 -1819463 + (CAAGA)n Simple_repeat Simple_repeat 1 436 0 1 792 326 214 107 0 chrUextra 27185083 27185242 -1819414 + (AATAG)n Simple_repeat Simple_repeat 5 180 0 1 792 2591 179 7 10 chrUextra 27185372 27185958 -1818698 - SAR_DM Satellite Satellite -467 1005 422 1 792 434 100 0 0 chrUextra 27186058 27186128 -1818528 - ARS406_DM Unknown Unknown -283 70 1 1 792 2504 185 9 7 chrUextra 27186066 27186644 -1818012 + SAR_DM Satellite Satellite 224 802 -670 1 792 3013 6 0 3 chrUextra 27186744 27187108 -1817548 + FW_DM LINE Jockey 4330 4692 0 1 792 895 104 97 0 chrUextra 27187145 27187289 -1817367 - DNAREP1_DM LINE Penelope -6 588 431 1 792 4704 7 12 17 chrUextra 27187430 27188016 -1816640 - QUASIMODO_I LTR Gypsy -5316 744 162 1 792 4985 3 0 2 chrUextra 27188116 27188702 -1815954 - R1_DM LINE R1 -3149 2207 1623 1 792 2231 207 14 5 chrUextra 27188802 27189385 -1815271 - SAR_DM Satellite Satellite -402 1070 483 1 792 211 184 0 0 chrUextra 27189562 27189600 -1815056 + (CGTG)n Simple_repeat Simple_repeat 4 41 0 1 792 29 28 0 0 chrUextra 27189791 27189827 -1814829 + AT_rich Low_complexity Low_complexity 1 36 0 1 792 4827 19 12 0 chrUextra 27190174 27190760 -1813896 - R1_DM LINE R1 -2842 2514 1922 1 792 2473 160 30 13 chrUextra 27190860 27192130 -1812526 - DMSAT6 Satellite Satellite -113 1291 1 1 792 1616 18 18 18 chrUextra 27192232 27192458 -1812198 + NTS_DM Other Other 15 240 0 1 792 1643 38 17 17 chrUextra 27192458 27192698 -1811958 + NTS_DM Other Other 1 240 0 1 792 895 58 0 0 chrUextra 27192698 27192818 -1811838 + NTS_DM Other Other 1 120 -120 1 792 4244 0 0 48 chrUextra 27192918 27193460 -1811196 - LSU-rRNA_Dme rRNA rRNA -3384 516 1 1 792 2234 162 25 10 chrUextra 27193604 27194120 -1810536 - ROVER-I_DM LTR Gypsy -72 6512 5989 1 792 33 56 0 0 chrUextra 27194322 27194376 -1810280 + AT_rich Low_complexity Low_complexity 1 54 0 1 792 1485 184 10 8 chrUextra 27194976 27195561 -1809095 - SAR_DM Satellite Satellite -539 585 1 1 792 2563 180 8 5 chrUextra 27195662 27196248 -1808408 + SAR_DM Satellite Satellite 385 972 -500 1 792 5006 0 2 5 chrUextra 27196348 27196934 -1807722 + SSU-rRNA_Dme rRNA rRNA 780 1363 -632 1 792 4822 5 19 0 chrUextra 27197034 27197620 -1807036 - QUASIMODO_I LTR Gypsy -3153 2907 2311 1 792 2953 0 3 0 chrUextra 27199092 27199433 -1805223 + R1_DM LINE R1 5015 5356 0 1 792 395 21 0 0 chrUextra 27199431 27199478 -1805178 + LSU-rRNA_Dme rRNA rRNA 2640 2686 -1214 1 792 1596 15 0 5 chrUextra 27199475 27199678 -1804978 + R1_DM LINE R1 852 1053 -4303 1 792 711 0 0 0 chrUextra 27199778 27199857 -1804799 + (GAGAA)n Simple_repeat Simple_repeat 4 82 0 1 792 468 0 0 0 chrUextra 27200998 27201050 -1803606 + (GAGAA)n Simple_repeat Simple_repeat 2 53 0 1 792 4788 15 0 0 chrUextra 27201150 27201736 -1802920 + ROO_I LTR Pao 3249 3834 -4422 1 792 21 57 0 0 chrUextra 27202344 27202379 -1802277 + AT_rich Low_complexity Low_complexity 1 35 0 1 792 1213 19 0 7 chrUextra 27202530 27202685 -1801971 - NTS_DM Other Other -86 154 1 1 792 1767 13 17 17 chrUextra 27202685 27202925 -1801731 - NTS_DM Other Other 0 240 1 1 792 1270 11 27 16 chrUextra 27202925 27203108 -1801548 - NTS_DM Other Other 0 240 56 1 792 2367 25 0 76 chrUextra 27203208 27203549 -1801107 - LSU-rRNA_Dme rRNA rRNA -3585 315 1 1 792 2091 172 9 4 chrUextra 27204590 27205045 -1799611 + SAR_DM Satellite Satellite 326 782 -690 1 792 716 68 0 0 chrUextra 27205063 27205166 -1799490 - ARS406_DM Unknown Unknown -181 172 70 1 792 2472 86 12 14 chrUextra 27205952 27206520 -1798136 + DMSAT6 Satellite Satellite 1 567 -64 1 792 870 9 0 27 chrUextra 27206680 27206792 -1797864 + NTS_DM Other Other 25 133 -107 1 792 1252 18 0 6 chrUextra 27206792 27206957 -1797699 + NTS_DM Other Other 38 201 -39 1 792 870 9 0 27 chrUextra 27207009 27207121 -1797535 + NTS_DM Other Other 25 133 -107 1 792 820 19 0 0 chrUextra 27207121 27207224 -1797432 + NTS_DM Other Other 38 140 -100 1 792 253 191 43 43 chrUextra 27208793 27208908 -1795748 + T-rich Low_complexity Low_complexity 3 117 0 1 792 208 273 47 8 chrUextra 27209078 27209207 -1795449 + T-rich Low_complexity Low_complexity 2 135 0 1 792 390 20 20 0 chrUextra 27209382 27209432 -1795224 + ARS406_DM Unknown Unknown 139 189 -164 1 792 1654 180 3 6 chrUextra 27209389 27209752 -1794904 - SAR_DM Satellite Satellite -615 857 496 1 792 1025 133 5 15 chrUextra 27209767 27209965 -1794691 - SAR_DM Satellite Satellite -569 903 708 1 792 5088 0 0 2 chrUextra 27210068 27210654 -1794002 + LSU-rRNA_Dme rRNA rRNA 2702 3286 -614 1 792 4447 38 19 10 chrUextra 27210754 27211340 -1793316 + DOC2_DM LINE Jockey 1441 2031 -2762 1 792 2015 77 3 53 chrUextra 27211440 27212003 -1792653 - DMSAT6 Satellite Satellite -65 534 1 1 792 4872 2 0 0 chrUextra 27212126 27212700 -1791956 - LSU-rRNA_Dme rRNA rRNA -3106 794 221 1 792 2311 186 24 10 chrUextra 27212812 27213398 -1791258 + SAR_DM Satellite Satellite 523 1116 -356 1 792 253 86 0 0 chrUextra 27213498 27213546 -1791110 + TAHRE LINE telomeric 10411 10443 -20 1 792 1884 162 31 39 chrUextra 27213548 27214068 -1790588 + HETA LINE telomeric 115 630 -5451 1 792 1356 32 0 0 chrUextra 27214184 27214436 -1790220 + (GAGAA)n Simple_repeat Simple_repeat 1 252 0 1 792 1222 17 27 22 chrUextra 27214870 27215055 -1789601 + NTS_DM Other Other 55 240 0 1 792 1734 21 17 17 chrUextra 27215055 27215295 -1789361 + NTS_DM Other Other 1 240 0 1 792 1263 19 0 6 chrUextra 27215295 27215456 -1789200 + NTS_DM Other Other 1 160 -80 1 792 2647 166 10 12 chrUextra 27215556 27216141 -1788515 - SAR_DM Satellite Satellite -471 1001 418 1 792 2204 117 2 45 chrUextra 27216243 27216827 -1787829 - DMSAT6 Satellite Satellite -117 559 1 1 792 2658 173 8 10 chrUextra 27216927 27217512 -1787144 + SAR_DM Satellite Satellite 433 1016 -456 1 792 3829 40 3 65 chrUextra 27217613 27218197 -1786459 - BATUMI_I LTR Pao -5020 2943 2396 1 792 246 150 0 0 chrUextra 27219029 27219069 -1785587 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 792 225 125 0 24 chrUextra 27219112 27219153 -1785503 + LSU-rRNA_Dme rRNA rRNA 2581 2620 -1280 1 792 22 56 0 0 chrUextra 27219166 27219202 -1785454 + AT_rich Low_complexity Low_complexity 1 36 0 1 792 870 9 0 27 chrUextra 27219228 27219340 -1785316 + NTS_DM Other Other 25 133 -107 1 792 1252 18 0 6 chrUextra 27219340 27219505 -1785151 + NTS_DM Other Other 38 201 -39 1 792 385 12 0 138 chrUextra 27220356 27220545 -1784111 + (TCTCTG)n Simple_repeat Simple_repeat 6 168 0 1 792 1498 36 0 7 chrUextra 27220629 27220937 -1783719 + (GAGAA)n Simple_repeat Simple_repeat 1 305 0 1 792 2293 175 9 24 chrUextra 27221037 27221617 -1783039 + SAR_DM Satellite Satellite 477 1047 -425 1 792 34 24 0 0 chrUextra 27222010 27222051 -1782605 + AT_rich Low_complexity Low_complexity 1 41 0 1 792 2615 172 8 8 chrUextra 27222407 27222992 -1781664 - SAR_DM Satellite Satellite -501 971 387 1 792 288 0 0 0 chrUextra 27223092 27223131 -1781525 + NTS_DM Other Other 95 133 -107 1 792 1252 18 0 6 chrUextra 27223131 27223296 -1781360 + NTS_DM Other Other 38 201 -39 1 792 870 9 0 27 chrUextra 27223348 27223460 -1781196 + NTS_DM Other Other 25 133 -107 1 792 1222 18 0 12 chrUextra 27223460 27223626 -1781030 + NTS_DM Other Other 38 201 -39 1 792 763 28 0 9 chrUextra 27223777 27223885 -1780771 + G2_DM LINE Jockey 2989 3095 -7 1 792 3512 58 0 0 chrUextra 27223885 27224351 -1780305 - G2_DM LINE Jockey -32 3070 2605 1 792 1056 164 0 3 chrUextra 27224462 27224757 -1779899 + (TATG)n Simple_repeat Simple_repeat 1 293 0 1 792 1158 169 0 0 chrUextra 27224756 27225047 -1779609 + (TA)n Simple_repeat Simple_repeat 1 291 0 1 792 1080 0 0 0 chrUextra 27225147 27225267 -1779389 + (CAAAA)n Simple_repeat Simple_repeat 1 120 0 1 792 1432 19 0 10 chrUextra 27225267 27225475 -1779181 + (CACAA)n Simple_repeat Simple_repeat 1 206 0 1 792 1481 36 0 13 chrUextra 27225495 27225732 -1778924 + (CACAA)n Simple_repeat Simple_repeat 1 233 0 1 792 1241 19 0 0 chrUextra 27225832 27225991 -1778665 + ACCORD2_I LTR Gypsy 4023 4181 -3031 1 792 3296 21 21 2 chrUextra 27225989 27226417 -1778239 + ACCORD2_I LTR Gypsy 3423 3858 -3354 1 792 2113 216 31 27 chrUextra 27226522 27227101 -1777555 + SAR_DM Satellite Satellite 1 581 -203 1 792 4804 2 0 2 chrUextra 27227202 27227756 -1776900 - LSU-rRNA_Dme rRNA rRNA -708 3192 2640 1 792 264 0 0 0 chrUextra 27227754 27227785 -1776871 - R1_DM LINE R1 0 5356 5326 1 792 1901 4 0 0 chrUextra 27227887 27228123 -1776533 + DOC LINE Jockey 4490 4725 0 1 792 180 0 0 0 chrUextra 27228123 27228143 -1776513 + (A)n Simple_repeat Simple_repeat 1 20 0 1 792 857 270 6 6 chrUextra 27228151 27228468 -1776188 + Copia_I LTR Copia 1533 1849 -2744 1 792 4942 15 0 0 chrUextra 27228572 27229157 -1775499 - STALKER4_I LTR Gypsy -2268 4262 3678 1 792 4960 5 0 3 chrUextra 27229942 27230524 -1774132 + STALKER4_I LTR Gypsy 3820 4399 -2131 1 792 4760 0 0 0 chrUextra 27231312 27231897 -1772759 - DM297_I LTR Gypsy -4647 1520 936 1 792 1192 81 0 0 chrUextra 27231997 27232170 -1772486 + BEL_LTR LTR Pao 189 361 0 1 792 3349 25 17 0 chrUextra 27232174 27232582 -1772074 + BEL_I LTR Pao 2 416 -4988 1 792 4816 32 0 0 chrUextra 27232682 27233267 -1771389 + BATUMI_I LTR Pao 3667 4251 -3712 1 792 2632 168 19 10 chrUextra 27233368 27233952 -1770704 - SAR_DM Satellite Satellite -478 994 406 1 792 4754 22 0 5 chrUextra 27234052 27234637 -1770019 + STALKER4_I LTR Gypsy 4358 4939 -1591 1 792 379 247 0 0 chrUextra 27235893 27235986 -1768670 + Copia2_I LTR Copia 140 232 -3930 1 792 21 95 0 0 chrUextra 27236261 27236324 -1768332 + AT_rich Low_complexity Low_complexity 1 63 0 1 792 2694 0 0 70 chrUextra 27236337 27236692 -1767964 + LSU-rRNA_Dme rRNA rRNA 2 331 -3569 1 792 2674 162 12 10 chrUextra 27236794 27237374 -1767282 - SAR_DM Satellite Satellite -514 958 378 1 792 4983 12 2 0 chrUextra 27237477 27238062 -1766594 + BS LINE Jockey 2145 2730 -2396 1 792 368 235 0 19 chrUextra 27238164 27238268 -1766388 - HETRP_DM Satellite Satellite -222 1650 1549 1 792 192 40 0 0 chrUextra 27238268 27238293 -1766363 + (TC)n Simple_repeat Simple_repeat 2 26 0 1 792 628 186 7 28 chrUextra 27238451 27238595 -1766061 - HETRP_DM Satellite Satellite -203 1669 1529 1 792 1578 16 0 0 chrUextra 27238847 27239210 -1765446 + (GAGAA)n Simple_repeat Simple_repeat 1 363 0 1 792 2607 154 28 12 chrUextra 27239550 27240117 -1764539 - SAR_DM Satellite Satellite -470 1002 427 1 792 5048 3 2 0 chrUextra 27240902 27241487 -1763169 - LSU-rRNA_Dme rRNA rRNA -1446 2454 1869 1 792 2479 173 17 12 chrUextra 27241588 27242172 -1762484 + SAR_DM Satellite Satellite 439 1025 -447 1 792 4760 29 2 0 chrUextra 27242272 27242857 -1761799 - R1_DM LINE R1 -3349 2007 1422 1 792 2193 98 26 33 chrUextra 27242957 27243542 -1761114 + DMSAT6 Satellite Satellite 1 581 -89 1 792 2129 200 12 21 chrUextra 27243644 27244220 -1760436 + SAR_DM Satellite Satellite 549 1119 -353 1 792 5025 5 0 0 chrUextra 27244327 27244912 -1759744 + R1_DM LINE R1 4299 4883 -473 1 792 2680 174 3 12 chrUextra 27245015 27245596 -1759060 + SAR_DM Satellite Satellite 481 1056 -416 1 792 2235 216 17 22 chrUextra 27245699 27246280 -1758376 + SAR_DM Satellite Satellite 1 578 -417 1 792 2357 187 7 19 chrUextra 27246380 27246964 -1757692 - SAR_DM Satellite Satellite -357 1115 539 1 792 3134 27 10 7 chrUextra 27247064 27247477 -1757179 - BATUMI_I LTR Pao -1123 6840 6427 1 792 1070 40 0 0 chrUextra 27247500 27247648 -1757008 + BATUMI_I LTR Pao 7303 7450 -513 1 792 4732 21 17 0 chrUextra 27247748 27248331 -1756325 + PROTOP DNA P 1010 1602 -2878 1 792 2416 76 19 7 chrUextra 27248432 27249016 -1755640 - DMSAT6 Satellite Satellite -82 591 1 1 792 3873 33 0 58 chrUextra 27249800 27250384 -1754272 + MAX_I LTR Pao 7165 7714 -200 1 792 32 0 0 0 chrUextra 27250484 27250516 -1754140 + AT_rich Low_complexity Low_complexity 1 32 0 1 792 3648 2 0 2 chrUextra 27250648 27251068 -1753588 + SSU-rRNA_Dme rRNA rRNA 1 419 -1576 1 792 415 0 0 137 chrUextra 27251169 27251308 -1753348 + (CAAAAA)n Simple_repeat Simple_repeat 4 123 0 1 792 1276 6 0 12 chrUextra 27252536 27252699 -1751957 - NTS_DM Other Other -79 161 1 1 792 1801 8 17 17 chrUextra 27252699 27252939 -1751717 - NTS_DM Other Other 0 240 1 1 792 1177 23 22 22 chrUextra 27252939 27253120 -1751536 - NTS_DM Other Other 0 240 60 1 792 4866 12 2 0 chrUextra 27253220 27253804 -1750852 - FW_DM LINE Jockey -2583 2109 1525 1 792 1533 23 0 0 chrUextra 27253904 27254214 -1750442 + (AATAG)n Simple_repeat Simple_repeat 1 310 0 1 792 1428 58 0 0 chrUextra 27254246 27254488 -1750168 + (AATAG)n Simple_repeat Simple_repeat 1 242 0 1 792 2557 75 25 11 chrUextra 27254588 27255153 -1749503 - DMSAT6 Satellite Satellite -113 572 1 1 792 2575 185 10 3 chrUextra 27255958 27256539 -1748117 + SAR_DM Satellite Satellite 278 862 -610 1 792 3754 104 57 0 chrUextra 27256640 27257224 -1747432 + Gypsy_I LTR Gypsy 4184 4800 -1707 1 792 34 24 0 0 chrUextra 27257383 27257424 -1747232 + AT_rich Low_complexity Low_complexity 1 41 0 1 792 2665 162 10 9 chrUextra 27258011 27258590 -1746066 - SAR_DM Satellite Satellite -615 857 278 1 792 2650 158 10 12 chrUextra 27258694 27259276 -1745380 - SAR_DM Satellite Satellite -499 973 393 1 792 32 0 0 0 chrUextra 27259712 27259744 -1744912 + AT_rich Low_complexity Low_complexity 1 32 0 1 792 696 0 0 12 chrUextra 27259876 27259960 -1744696 + SSU-rRNA_Dme rRNA rRNA 1 83 -1912 1 792 34 24 0 0 chrUextra 27260198 27260239 -1744417 + AT_rich Low_complexity Low_complexity 1 41 0 1 792 1269 94 0 6 chrUextra 27260744 27261252 -1743404 + (TAGA)n Simple_repeat Simple_repeat 1 505 0 1 792 528 65 0 0 chrUextra 27261252 27261328 -1743328 + (ATCG)n Simple_repeat Simple_repeat 4 80 0 1 792 4638 10 2 0 chrUextra 27261428 27262012 -1742644 + QUASIMODO_I LTR Gypsy 4480 5064 -996 1 792 4811 15 2 2 chrUextra 27262112 27262696 -1741960 - R1_DM LINE R1 -1163 4193 3610 1 12 2468 171 48 10 chrUextra 27262796 27263376 -1741280 - SAR_DM Satellite Satellite -444 1028 427 1 793 30 27 0 0 chrUextra 27263762 27263799 -1740857 + AT_rich Low_complexity Low_complexity 1 37 0 1 793 210 37 0 0 chrUextra 27263916 27263943 -1740713 + (TAA)n Simple_repeat Simple_repeat 1 27 0 1 793 1761 14 0 0 chrUextra 27264187 27264399 -1740257 - R2_DM LINE R2 0 3607 3396 1 793 3036 0 0 3 chrUextra 27264396 27264748 -1739908 - LSU-rRNA_Dme rRNA rRNA -1321 2579 2229 1 793 2452 174 24 35 chrUextra 27264850 27266116 -1738540 - DMSAT6 Satellite Satellite -104 1251 1 1 793 4400 2 0 0 chrUextra 27266216 27266720 -1737936 - LSU-rRNA_Dme rRNA rRNA -1609 2291 1788 1 793 258 0 0 28 chrUextra 27266764 27266800 -1737856 - LSU-rRNA_Dme rRNA rRNA -2112 1788 1754 1 793 2612 164 14 9 chrUextra 27266908 27267475 -1737181 + SAR_DM Satellite Satellite 334 903 -569 1 793 920 73 7 20 chrUextra 27267619 27268168 -1736488 - RSP Satellite Satellite 0 542 1 1 793 4913 14 0 0 chrUextra 27268268 27268852 -1735804 - R1_DM LINE R1 -2871 2485 1902 1 793 2570 74 10 57 chrUextra 27268952 27269536 -1735120 - DMSAT6 Satellite Satellite -4 557 1 1 793 4998 3 0 3 chrUextra 27269636 27270220 -1734436 + SSU-rRNA_Dme rRNA rRNA 598 1179 -816 1 793 2405 175 13 16 chrUextra 27270320 27270871 -1733785 + SAR_DM Satellite Satellite 508 1056 -416 1 793 297 0 0 0 chrUextra 27270871 27270904 -1733752 + (T)n Simple_repeat Simple_repeat 1 33 0 1 793 295 144 123 12 chrUextra 27271689 27271851 -1732805 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 1 793 341 153 108 0 chrUextra 27272161 27272272 -1732384 + (TCTG)n Simple_repeat Simple_repeat 2 124 0 1 793 4878 9 10 2 chrUextra 27272372 27272956 -1731700 + Copia2_I LTR Copia 677 1265 -2897 1 793 4895 9 0 3 chrUextra 27273056 27273640 -1731016 - R1_DM LINE R1 -8 5348 4767 1 793 1127 0 0 0 chrUextra 27273740 27273871 -1730785 - NTS_DM Other Other -109 131 1 1 793 1825 8 17 13 chrUextra 27273871 27274110 -1730546 - NTS_DM Other Other 0 240 1 1 793 1460 33 19 19 chrUextra 27274110 27274324 -1730332 - NTS_DM Other Other 0 240 27 1 793 268 82 20 0 chrUextra 27274424 27274473 -1730183 - HMSBEAGLE_I LTR Gypsy -4134 2395 2346 1 793 3741 103 0 2 chrUextra 27274463 27275005 -1729651 - HMSBEAGLE_I LTR Gypsy -4710 1819 1279 1 793 423 20 0 0 chrUextra 27275107 27275158 -1729498 - BATUMI_I LTR Pao -7912 51 1 1 793 1771 53 37 26 chrUextra 27275158 27275427 -1729229 - BATUMI_LTR LTR Pao 0 272 1 1 793 779 0 0 11 chrUextra 27275790 27275882 -1728774 + (ACATG)n Simple_repeat Simple_repeat 4 94 0 1 793 1620 0 0 2 chrUextra 27275942 27276373 -1728283 + (AGATG)n Simple_repeat Simple_repeat 1 429 0 1 793 4990 5 0 0 chrUextra 27276473 27277056 -1727600 + R1_DM LINE R1 3197 3779 -1577 1 793 5325 0 3 3 chrUextra 27277157 27277739 -1726917 - SSU-rRNA_Dme rRNA rRNA -668 1327 746 1 793 2448 166 29 35 chrUextra 27277842 27278421 -1726235 + SAR_DM Satellite Satellite 528 1103 -369 1 793 4951 31 10 0 chrUextra 27278522 27279105 -1725551 + R1_DM LINE R1 1878 2466 -2890 1 793 534 119 36 0 chrUextra 27279245 27279329 -1725327 - NTS_DM Other Other -150 90 4 1 793 1359 6 0 24 chrUextra 27279439 27279605 -1725051 - NTS_DM Other Other -78 162 1 1 793 1426 6 22 16 chrUextra 27279605 27279788 -1724868 - NTS_DM Other Other 0 240 57 1 793 5301 2 0 2 chrUextra 27279888 27280471 -1724185 - HETA LINE telomeric -3967 2114 1533 1 793 4466 6 0 2 chrUextra 27280662 27281154 -1723502 + DMRT1B LINE R1 1 491 -4692 1 793 2405 210 10 12 chrUextra 27281254 27281837 -1722819 + SAR_DM Satellite Satellite 446 1027 -445 1 793 915 260 26 19 chrUextra 27281942 27282252 -1722404 - XDMR_DM Unknown Unknown -43 317 6 1 793 3724 263 45 43 chrUextra 27281986 27283196 -1721460 + SAR_DM Satellite Satellite 57 1269 -203 1 793 5442 0 2 0 chrUextra 27283303 27283886 -1720770 + SSU-rRNA_Dme rRNA rRNA 368 951 -1044 1 793 5175 17 2 0 chrUextra 27283986 27284569 -1720087 + R1_DM LINE R1 4075 4658 -698 1 793 2831 163 64 3 chrUextra 27284673 27285252 -1719404 - SAR_DM Satellite Satellite -620 852 239 1 793 2393 178 20 27 chrUextra 27285353 27285935 -1718721 + SAR_DM Satellite Satellite 1 578 -378 1 793 225 154 0 0 chrUextra 27287063 27287102 -1717554 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 793 246 296 20 20 chrUextra 27287450 27287550 -1717106 - Copia_I LTR Copia -357 4236 4137 1 793 228 330 34 8 chrUextra 27287533 27287652 -1717004 - Copia2_I LTR Copia -283 3879 3758 1 793 23 68 0 0 chrUextra 27288796 27288840 -1715816 + AT_rich Low_complexity Low_complexity 1 44 0 1 793 2994 158 11 7 chrUextra 27289454 27290021 -1714635 - SAR_DM Satellite Satellite -535 937 369 1 793 202 265 0 0 chrUextra 27290152 27290201 -1714455 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 793 401 85 73 0 chrUextra 27290816 27290898 -1713758 + CT-rich Low_complexity Low_complexity 2 89 0 1 793 2818 180 10 5 chrUextra 27291499 27292081 -1712575 - SAR_DM Satellite Satellite -645 827 243 1 793 328 23 0 22 chrUextra 27292182 27292227 -1712429 + LSU-rRNA_Dme rRNA rRNA 1748 1791 -2109 1 793 4617 2 0 0 chrUextra 27292269 27292765 -1711891 + LSU-rRNA_Dme rRNA rRNA 1788 2283 -1617 1 793 1751 174 7 5 chrUextra 27292866 27293448 -1711208 + SAR_DM Satellite Satellite 1 582 -558 1 793 2790 166 17 24 chrUextra 27293548 27294129 -1710527 + SAR_DM Satellite Satellite 373 949 -523 1 793 1301 0 0 7 chrUextra 27294914 27295064 -1709592 + (ATAAG)n Simple_repeat Simple_repeat 1 149 0 1 793 577 6 0 144 chrUextra 27295731 27295939 -1708717 + (TAAAAA)n Simple_repeat Simple_repeat 2 179 0 1 793 5222 12 0 0 chrUextra 27296280 27296863 -1707793 - MDG3_I LTR Gypsy -2424 2562 1980 1 793 2672 76 3 71 chrUextra 27296965 27297545 -1707111 - DMSAT6 Satellite Satellite -82 541 1 1 793 23 54 0 0 chrUextra 27297647 27297684 -1706972 + AT_rich Low_complexity Low_complexity 1 37 0 1 793 936 9 0 27 chrUextra 27297710 27297822 -1706834 + NTS_DM Other Other 25 133 -107 1 793 1532 20 20 20 chrUextra 27297822 27298025 -1706631 + NTS_DM Other Other 38 240 0 1 793 1680 25 0 5 chrUextra 27298025 27298227 -1706429 + NTS_DM Other Other 1 201 -39 1 793 2813 174 9 12 chrUextra 27299009 27299589 -1705067 - SAR_DM Satellite Satellite -470 1002 425 1 793 371 24 0 0 chrUextra 27299691 27299733 -1704923 - NTS_DM Other Other -161 79 38 1 793 876 0 0 0 chrUextra 27299733 27299829 -1704827 - NTS_DM Other Other -107 133 38 1 793 868 9 9 36 chrUextra 27299829 27299941 -1704715 - NTS_DM Other Other -107 133 25 1 793 21 57 0 0 chrUextra 27299968 27300003 -1704653 + AT_rich Low_complexity Low_complexity 1 35 0 1 793 1350 18 0 6 chrUextra 27300003 27300168 -1704488 - NTS_DM Other Other -39 201 38 1 793 913 10 0 0 chrUextra 27300168 27300270 -1704386 - NTS_DM Other Other -107 133 32 1 793 1026 77 8 19 chrUextra 27300373 27300955 -1703701 - RSP Satellite Satellite -79 576 1 1 793 5090 29 0 0 chrUextra 27301055 27301637 -1703019 + SSU-rRNA_Dme rRNA rRNA 180 761 -1234 1 793 2663 172 9 19 chrUextra 27301737 27302313 -1702343 - SAR_DM Satellite Satellite -504 968 399 1 793 5323 5 0 0 chrUextra 27302419 27303001 -1701655 - DM1731_I LTR Copia -3279 697 116 1 793 1200 22 0 0 chrUextra 27303312 27303447 -1701209 - 5S_DM RNA RNA 0 135 1 1 793 1333 24 0 6 chrUextra 27303791 27303956 -1700700 + NTS_DM Other Other 38 201 -39 1 793 936 9 0 27 chrUextra 27304008 27304120 -1700536 + NTS_DM Other Other 25 133 -107 1 793 1558 15 20 20 chrUextra 27304120 27304323 -1700333 + NTS_DM Other Other 38 240 0 1 793 341 26 0 0 chrUextra 27304326 27304365 -1700291 + NTS_DM Other Other 5 43 -197 1 793 3035 32 0 16 chrUextra 27304467 27305047 -1699609 + Copia_I LTR Copia 2239 2652 -1941 1 793 1709 92 11 46 chrUextra 27305147 27305430 -1699226 + MDG1_I LTR Gypsy 6008 6280 -316 1 793 730 85 226 73 chrUextra 27305404 27305581 -1699075 + MDG1_I LTR Gypsy 6393 6596 0 1 793 383 68 17 0 chrUextra 27305600 27305659 -1698997 + (TAA)n Simple_repeat Simple_repeat 3 62 0 1 793 359 121 52 0 chrUextra 27305671 27305729 -1698927 + MDG1_LTR LTR Gypsy 123 183 -259 1 793 915 56 0 0 chrUextra 27306283 27306409 -1698247 + (TATTG)n Simple_repeat Simple_repeat 5 130 0 1 793 2806 174 26 3 chrUextra 27306514 27307086 -1697570 + SAR_DM Satellite Satellite 295 879 -593 1 793 489 45 76 0 chrUextra 27307027 27307093 -1697563 - ARS406_DM Unknown Unknown -164 189 119 1 793 5321 3 0 0 chrUextra 27307193 27307775 -1696881 + FW_DM LINE Jockey 3141 3722 -970 1 793 5401 0 2 2 chrUextra 27307875 27308457 -1696199 + SSU-rRNA_Dme rRNA rRNA 1413 1994 -1 1 793 2460 113 14 29 chrUextra 27308557 27309139 -1695517 + DMSAT6 Satellite Satellite 1 572 -85 1 793 4526 11 0 69 chrUextra 27309239 27309821 -1694835 - DM176_I LTR Gypsy -5412 1008 467 1 793 2499 184 12 8 chrUextra 27309921 27310503 -1694153 - SAR_DM Satellite Satellite -823 583 1 1 793 479 198 0 10 chrUextra 27310603 27310700 -1693956 - HETRP_DM Satellite Satellite -248 1624 1529 1 793 751 203 6 19 chrUextra 27310855 27311011 -1693645 - HETRP_DM Satellite Satellite -190 1682 1529 1 793 2624 177 24 24 chrUextra 27311287 27311867 -1692789 - SAR_DM Satellite Satellite -369 1103 524 1 793 5319 2 5 2 chrUextra 27311967 27312549 -1692107 - LSU-rRNA_Dme rRNA rRNA -150 3750 3167 1 793 4797 0 36 17 chrUextra 27312649 27313231 -1691425 + ROO_I LTR Pao 428 1020 -7236 1 793 5150 0 0 0 chrUextra 27313357 27313913 -1690743 - TIRANT_I LTR Gypsy 0 7692 7137 1 793 485 210 423 18 chrUextra 27314013 27314362 -1690294 + MAX_I LTR Pao 676 1164 -6750 1 793 920 89 211 18 chrUextra 27314362 27314580 -1690076 + MAX_I LTR Pao 938 1197 -6717 1 793 3821 106 126 5 chrUextra 27314696 27315277 -1689379 - Gypsy12_I LTR Gypsy -2813 2733 2083 1 793 372 197 0 0 chrUextra 27315586 27315662 -1688994 + BS LINE Jockey 2027 2102 -3024 1 793 308 200 97 65 chrUextra 27315787 27315942 -1688714 + BS LINE Jockey 2015 2174 -2952 1 793 252 188 0 0 chrUextra 27316059 27316123 -1688533 + (AATAG)n Simple_repeat Simple_repeat 5 68 0 1 793 3383 0 0 0 chrUextra 27316123 27316484 -1688172 - BEL_LTR LTR Pao 0 361 1 1 793 1455 0 0 0 chrUextra 27316484 27316641 -1688015 - BEL_I LTR Pao 0 5404 5248 1 793 2523 181 8 21 chrUextra 27316743 27318004 -1686652 - DMSAT6 Satellite Satellite -250 1244 1 1 793 5249 0 0 2 chrUextra 27318105 27318687 -1685969 + ROO_I LTR Pao 3120 3700 -4556 1 793 335 0 0 162 chrUextra 27319189 27319368 -1685288 + (CATAG)n Simple_repeat Simple_repeat 1 150 0 1 793 1328 14 0 14 chrUextra 27319473 27319756 -1684900 + (GAGAA)n Simple_repeat Simple_repeat 1 279 0 1 793 1041 94 0 0 chrUextra 27319760 27320048 -1684608 + (ACATG)n Simple_repeat Simple_repeat 1 288 0 1 793 1233 73 0 0 chrUextra 27320211 27320376 -1684280 + (TCCTG)n Simple_repeat Simple_repeat 4 168 0 1 793 5276 0 2 0 chrUextra 27320833 27321415 -1683241 - LSU-rRNA_Dme rRNA rRNA -3095 805 223 1 793 2550 91 16 17 chrUextra 27321515 27322097 -1682559 + DMSAT6 Satellite Satellite 1 581 -82 1 793 2846 172 17 7 chrUextra 27322198 27322777 -1681879 + SAR_DM Satellite Satellite 301 885 -587 1 793 2711 183 11 12 chrUextra 27322880 27323451 -1681205 + SAR_DM Satellite Satellite 507 1076 -396 1 793 5303 0 5 2 chrUextra 27323561 27324142 -1680514 + SSU-rRNA_Dme rRNA rRNA 616 1198 -797 1 793 32 0 0 0 chrUextra 27324304 27324336 -1680320 + AT_rich Low_complexity Low_complexity 1 32 0 1 793 3288 6 0 0 chrUextra 27324468 27324823 -1679833 + SSU-rRNA_Dme rRNA rRNA 1 355 -1640 1 793 2356 121 7 36 chrUextra 27324943 27325504 -1679152 - DMSAT6 Satellite Satellite -3 545 1 1 793 5431 2 0 0 chrUextra 27325604 27326185 -1678471 + LSU-rRNA_Dme rRNA rRNA 2363 2943 -957 1 793 2659 183 7 19 chrUextra 27326285 27326864 -1677792 + SAR_DM Satellite Satellite 540 1111 -361 1 793 3034 154 11 9 chrUextra 27326966 27327535 -1677121 - SAR_DM Satellite Satellite -534 938 369 1 793 1661 0 20 15 chrUextra 27327647 27327850 -1676806 + NTS_DM Other Other 37 240 0 1 793 1657 0 0 0 chrUextra 27327850 27328034 -1676622 + NTS_DM Other Other 1 184 -56 1 793 2436 100 13 25 chrUextra 27329690 27330246 -1674410 + DMSAT6 Satellite Satellite 1 548 -65 1 793 3710 43 20 14 chrUextra 27330371 27330863 -1673793 - BATUMI_I LTR Pao -1042 6921 6427 1 793 486 45 0 0 chrUextra 27330886 27330952 -1673704 + BATUMI_I LTR Pao 7303 7368 -595 1 793 1041 94 0 0 chrUextra 27331407 27331633 -1673023 + (ACATG)n Simple_repeat Simple_repeat 1 226 0 1 793 2109 121 12 39 chrUextra 27331745 27332314 -1672342 - DMSAT6 Satellite Satellite -1 553 1 1 793 5327 2 0 0 chrUextra 27332414 27332995 -1671661 + DOC LINE Jockey 2420 3000 -1725 1 793 5146 3 0 3 chrUextra 27333095 27333676 -1670980 - ROO_I LTR Pao -6089 2167 1589 1 793 1855 0 0 5 chrUextra 27333776 27333977 -1670679 + SSU-rRNA_Dme rRNA rRNA 1796 1995 0 1 793 21 89 0 0 chrUextra 27333996 27334052 -1670604 + AT_rich Low_complexity Low_complexity 1 56 0 1 793 4192 65 43 19 chrUextra 27334457 27335038 -1669618 + R1_DM LINE R1 196 790 -4566 1 793 1400 181 10 5 chrUextra 27335143 27335719 -1668937 + SAR_DM Satellite Satellite 1 578 -558 1 793 2413 191 66 7 chrUextra 27335825 27336400 -1668256 - SAR_DM Satellite Satellite -479 993 385 1 793 2338 181 72 14 chrUextra 27336508 27337075 -1667581 + TAHRE LINE telomeric 7309 7908 -2555 1 793 2697 151 17 25 chrUextra 27337205 27338442 -1666214 - DMSAT6 Satellite Satellite 0 1226 1 1 793 2873 166 10 10 chrUextra 27338545 27339124 -1665532 - SAR_DM Satellite Satellite -514 958 380 1 793 225 0 0 0 chrUextra 27339224 27339248 -1665408 - NTS_DM Other Other -216 24 1 1 793 1908 13 17 17 chrUextra 27339248 27339488 -1665168 - NTS_DM Other Other 0 240 1 1 793 1883 21 17 13 chrUextra 27339488 27339727 -1664929 - NTS_DM Other Other 0 240 1 1 793 540 13 39 39 chrUextra 27339727 27339805 -1664851 - NTS_DM Other Other 0 240 163 1 793 3341 10 1 8 chrUextra 27339906 27340486 -1664170 + HETRP_DM Satellite Satellite 1 575 -1284 1 793 5281 0 0 2 chrUextra 27340586 27341167 -1663489 - R1_DM LINE R1 -2152 3204 2625 1 793 5253 2 0 2 chrUextra 27341948 27342515 -1662141 - LSU-rRNA_Dme rRNA rRNA -695 3205 2640 1 793 1812 281 24 2 chrUextra 27342632 27343178 -1661478 - ROVER-I_DM LTR Gypsy -5084 1500 943 1 793 5212 3 2 3 chrUextra 27343310 27343891 -1660765 + R1_DM LINE R1 3585 4164 -1192 1 793 2925 157 14 10 chrUextra 27343991 27344571 -1660085 - SAR_DM Satellite Satellite -539 933 352 1 793 202 265 0 0 chrUextra 27344705 27344754 -1659902 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 793 2764 173 10 16 chrUextra 27345353 27345933 -1658723 + SAR_DM Satellite Satellite 430 1006 -466 1 793 21 95 0 0 chrUextra 27346236 27346299 -1658357 + AT_rich Low_complexity Low_complexity 1 63 0 1 793 2411 0 0 82 chrUextra 27346311 27346615 -1658041 + LSU-rRNA_Dme rRNA rRNA 1 279 -3621 1 793 2514 120 11 21 chrUextra 27347396 27347968 -1656688 + DMSAT6 Satellite Satellite 1 565 -74 1 793 2859 164 10 12 chrUextra 27348077 27348656 -1656000 + SAR_DM Satellite Satellite 381 958 -514 1 793 5326 3 0 2 chrUextra 27348758 27349339 -1655317 - LSU-rRNA_Dme rRNA rRNA -1430 2470 1891 1 793 2583 92 17 28 chrUextra 27349440 27350020 -1654636 - DMSAT6 Satellite Satellite -75 574 1 1 793 990 117 7 0 chrUextra 27350120 27350274 -1654382 + HETA LINE telomeric 3033 3187 -2894 1 793 1094 156 62 53 chrUextra 27350396 27350701 -1653955 + TART LINE telomeric 9364 9659 -4818 1 793 3851 18 0 0 chrUextra 27350801 27351252 -1653404 - TART LINE telomeric -5571 8906 8456 1 793 725 87 38 30 chrUextra 27351250 27351381 -1653275 - TART LINE telomeric -3809 10668 10537 1 793 4532 12 0 0 chrUextra 27351514 27352021 -1652635 - DM176_LTR LTR Gypsy 0 507 1 1 793 376 0 0 0 chrUextra 27352021 27352061 -1652595 - DM176_I LTR Gypsy 0 6420 6381 1 793 241 0 0 0 chrUextra 27352161 27352187 -1652469 - NTS_DM Other Other -214 26 1 1 793 1828 21 17 21 chrUextra 27352187 27352428 -1652228 - NTS_DM Other Other 0 240 1 1 793 1880 17 17 17 chrUextra 27352428 27352668 -1651988 - NTS_DM Other Other 0 240 1 1 793 486 14 55 41 chrUextra 27352668 27352741 -1651915 - NTS_DM Other Other 0 240 167 1 793 5273 5 2 2 chrUextra 27352841 27353421 -1651235 + LSU-rRNA_Dme rRNA rRNA 739 1318 -2582 1 793 5419 2 2 0 chrUextra 27353521 27354101 -1650555 - LSU-rRNA_Dme rRNA rRNA -13 3887 3307 1 793 5317 3 2 2 chrUextra 27354201 27354781 -1649875 + SSU-rRNA_Dme rRNA rRNA 690 1269 -726 1 793 4757 0 0 0 chrUextra 27354881 27355405 -1649251 + DOC LINE Jockey 4202 4725 0 1 793 485 0 0 0 chrUextra 27355408 27355461 -1649195 - CIRCE LINE Composite -4896 1460 1408 1 793 2672 73 14 45 chrUextra 27356241 27356799 -1647857 - DMSAT6 Satellite Satellite -99 540 1 1 793 4145 108 3 5 chrUextra 27356922 27357501 -1647155 + Gypsy12_I LTR Gypsy 2194 2771 -2775 1 793 5309 7 0 0 chrUextra 27357603 27358181 -1646475 + FW_DM LINE Jockey 3816 4393 -299 1 793 5179 3 0 2 chrUextra 27358281 27358861 -1645795 + ROO_I LTR Pao 3131 3709 -4547 1 793 2596 168 58 14 chrUextra 27358968 27359541 -1645115 + SAR_DM Satellite Satellite 326 923 -549 1 793 1358 6 0 24 chrUextra 27359689 27359855 -1644801 - NTS_DM Other Other -78 162 1 1 793 1972 4 17 13 chrUextra 27359855 27360094 -1644562 - NTS_DM Other Other 0 240 1 1 793 920 0 31 24 chrUextra 27360094 27360221 -1644435 - NTS_DM Other Other 0 240 113 1 793 4997 5 12 3 chrUextra 27360321 27360901 -1643755 - TAHRE LINE telomeric -2409 8054 7470 1 793 5365 5 0 0 chrUextra 27361681 27362261 -1642395 + R1_DM LINE R1 4185 4764 -592 1 793 2656 87 14 24 chrUextra 27362366 27362941 -1641715 + DMSAT6 Satellite Satellite 1 568 -119 1 793 2504 4 0 0 chrUextra 27363353 27363621 -1641035 - ROO_LTR LTR Pao 0 428 161 1 793 5293 12 0 0 chrUextra 27363721 27364301 -1640355 - LSU-rRNA_Dme rRNA rRNA -922 2978 2399 1 793 4507 8 3 79 chrUextra 27364401 27364981 -1639675 - LSU-rRNA_Dme rRNA rRNA -1987 1913 1378 1 793 2560 92 7 43 chrUextra 27365081 27365660 -1638996 + DMSAT6 Satellite Satellite 1 557 -74 1 793 1216 44 0 0 chrUextra 27365777 27365936 -1638720 - G2_DM LINE Jockey -10 3092 2934 1 793 3084 71 32 0 chrUextra 27365932 27366341 -1638315 + G2_DM LINE Jockey 2527 2948 -154 1 793 1461 23 0 0 chrUextra 27366654 27366831 -1637825 + (TTCTC)n Simple_repeat Simple_repeat 1 177 0 1 793 1296 51 0 0 chrUextra 27366835 27367012 -1637644 + (CACAT)n Simple_repeat Simple_repeat 3 179 0 1 793 5205 2 2 7 chrUextra 27367121 27367701 -1636955 - LSU-rRNA_Dme rRNA rRNA -2284 1616 1040 1 793 1620 0 0 0 chrUextra 27368142 27368381 -1636275 + (TTCTC)n Simple_repeat Simple_repeat 1 239 0 1 793 2706 177 12 7 chrUextra 27368481 27369060 -1635596 - SAR_DM Satellite Satellite -667 805 224 1 793 757 0 11 0 chrUextra 27369161 27369250 -1635406 + R2_DM LINE R2 3516 3605 -2 1 793 485 36 0 0 chrUextra 27369246 27369301 -1635355 + LSU-rRNA_Dme rRNA rRNA 2578 2632 -1268 1 793 3982 5 7 0 chrUextra 27369301 27369741 -1634915 + R1_DM LINE R1 1 443 -4913 1 793 1599 6 0 0 chrUextra 27370527 27370707 -1633949 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 793 2826 3 0 3 chrUextra 27371201 27371512 -1633144 + STALKER4_LTR LTR Gypsy 93 402 0 1 793 1620 0 0 0 chrUextra 27371536 27371780 -1632876 + (CACAA)n Simple_repeat Simple_repeat 1 244 0 1 793 2514 96 2 78 chrUextra 27371886 27372441 -1632215 - DMSAT6 Satellite Satellite -59 512 1 1 793 5337 5 0 0 chrUextra 27372561 27373141 -1631515 - R1_DM LINE R1 -2864 2492 1913 1 793 4920 33 2 2 chrUextra 27373921 27374501 -1630155 + R1_DM LINE R1 2478 3057 -2299 1 793 4687 30 14 3 chrUextra 27374601 27375180 -1629476 + DM176_I LTR Gypsy 1418 2002 -4418 1 793 1296 20 0 0 chrUextra 27375281 27375431 -1629225 - NTS_DM Other Other -90 150 1 1 793 1850 17 17 21 chrUextra 27375431 27375672 -1628984 - NTS_DM Other Other 0 240 1 1 793 1383 16 21 21 chrUextra 27375672 27375861 -1628795 - NTS_DM Other Other 0 240 52 1 793 2596 112 12 7 chrUextra 27375961 27376540 -1628116 + DMSAT6 Satellite Satellite 1 582 -59 1 793 1239 6 0 48 chrUextra 27377028 27377217 -1627439 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 793 4404 71 12 7 chrUextra 27377998 27378577 -1626079 + R1_DM LINE R1 1409 1990 -3366 1 793 4622 16 128 2 chrUextra 27380035 27380614 -1624042 + DOC2_DM LINE Jockey 3318 3969 -824 1 793 5393 2 0 0 chrUextra 27380714 27381293 -1623363 - LSU-rRNA_Dme rRNA rRNA -728 3172 2594 1 793 2757 173 13 12 chrUextra 27382072 27383330 -1621326 - DMSAT6 Satellite Satellite -118 1259 1 1 793 2610 100 14 30 chrUextra 27383430 27384007 -1620649 + DMSAT6 Satellite Satellite 1 567 -29 1 793 21 95 0 0 chrUextra 27384342 27384405 -1620251 + AT_rich Low_complexity Low_complexity 1 63 0 1 793 2077 4 0 92 chrUextra 27384417 27384688 -1619968 + LSU-rRNA_Dme rRNA rRNA 1 246 -3654 1 793 886 280 40 40 chrUextra 27384804 27385355 -1619301 + DM412 LTR Gypsy 3043 3593 -3304 1 793 5004 30 2 2 chrUextra 27385467 27386046 -1618610 + R1_DM LINE R1 4699 5277 -79 1 793 2736 174 9 14 chrUextra 27386146 27386724 -1617932 + SAR_DM Satellite Satellite 284 858 -614 1 793 2832 165 13 7 chrUextra 27386825 27387382 -1617274 - SAR_DM Satellite Satellite -587 885 326 1 793 3212 0 2 63 chrUextra 27387504 27387899 -1616757 - LSU-rRNA_Dme rRNA rRNA -3529 371 1 1 793 21 95 0 0 chrUextra 27387911 27387974 -1616682 + AT_rich Low_complexity Low_complexity 1 63 0 1 793 3358 30 2 5 chrUextra 27388183 27388583 -1616073 + BATUMI_I LTR Pao 7565 7963 0 1 793 1182 53 17 23 chrUextra 27388583 27388762 -1615894 + BATUMI_LTR LTR Pao 35 178 -94 1 793 2965 161 11 9 chrUextra 27388862 27389432 -1615224 + SAR_DM Satellite Satellite 333 903 -569 1 793 2845 165 21 10 chrUextra 27389544 27390119 -1614537 + SAR_DM Satellite Satellite 369 949 -523 1 793 2776 84 11 16 chrUextra 27390220 27390787 -1613869 - DMSAT6 Satellite Satellite -102 563 1 1 793 5207 12 7 0 chrUextra 27390899 27391478 -1613178 + DM1731_I LTR Copia 904 1486 -2490 1 793 666 12 0 47 chrUextra 27391578 27391663 -1612993 - NTS_DM Other Other -135 105 25 1 793 1350 18 0 6 chrUextra 27391715 27391880 -1612776 - NTS_DM Other Other -39 201 38 1 793 936 9 0 27 chrUextra 27391880 27391992 -1612664 - NTS_DM Other Other -107 133 25 1 793 22 56 0 0 chrUextra 27392018 27392054 -1612602 + AT_rich Low_complexity Low_complexity 1 36 0 1 793 278 176 0 19 chrUextra 27392067 27392119 -1612537 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 793 4626 9 3 7 chrUextra 27392258 27392836 -1611820 + Stalker2_I LTR Gypsy 861 1436 -5966 1 793 2586 180 19 9 chrUextra 27392943 27393509 -1611147 - SAR_DM Satellite Satellite -683 789 218 1 99 2486 86 7 66 chrUextra 27393615 27394194 -1610462 - DMSAT6 Satellite Satellite -109 544 1 1 794 1716 23 14 22 chrUextra 27394294 27394517 -1610139 - NTS_DM Other Other -19 221 1 1 794 1558 15 20 20 chrUextra 27394517 27394720 -1609936 - NTS_DM Other Other 0 240 38 1 794 1951 8 17 17 chrUextra 27395008 27395248 -1609408 + NTS_DM Other Other 1 240 0 1 794 1976 0 17 17 chrUextra 27395248 27395488 -1609168 + NTS_DM Other Other 1 240 0 1 794 603 0 0 0 chrUextra 27395488 27395552 -1609104 + NTS_DM Other Other 1 64 -176 1 794 4840 12 0 5 chrUextra 27395652 27396231 -1608425 - TABOR_I LTR Gypsy -283 6053 5478 1 794 527 0 0 0 chrUextra 27396331 27396388 -1608268 - NTS_DM Other Other -146 94 38 1 794 936 9 0 27 chrUextra 27396388 27396500 -1608156 - NTS_DM Other Other -107 133 25 1 794 1350 18 0 6 chrUextra 27396552 27396717 -1607939 - NTS_DM Other Other -39 201 38 1 794 936 9 0 27 chrUextra 27396717 27396829 -1607827 - NTS_DM Other Other -107 133 25 1 794 198 0 0 0 chrUextra 27396852 27396874 -1607782 + (T)n Simple_repeat Simple_repeat 1 22 0 1 794 267 56 0 0 chrUextra 27396874 27396910 -1607746 - G6_DM LINE Jockey 0 2042 2007 1 794 380 132 66 0 chrUextra 27397689 27397795 -1606861 + GA-rich Low_complexity Low_complexity 5 117 0 1 794 270 0 129 0 chrUextra 27397792 27397862 -1606794 + (CAGA)n Simple_repeat Simple_repeat 2 80 0 1 794 523 0 136 0 chrUextra 27397862 27398009 -1606647 + (GA)n Simple_repeat Simple_repeat 2 168 0 1 794 1720 179 15 7 chrUextra 27398368 27398947 -1605709 + SAR_DM Satellite Satellite 1 583 -645 1 794 2450 91 25 30 chrUextra 27399047 27399613 -1605043 - DMSAT6 Satellite Satellite -112 563 1 1 794 2977 168 9 7 chrUextra 27399726 27400303 -1604353 + SAR_DM Satellite Satellite 346 923 -549 1 794 5100 3 0 3 chrUextra 27400406 27400978 -1603678 - NOMAD_I LTR Gypsy -330 6242 5673 1 794 5084 24 3 0 chrUextra 27401081 27401659 -1602997 + Gypsy6_I LTR Gypsy 3638 4217 -2795 1 794 990 0 0 0 chrUextra 27402227 27402337 -1602319 + (TTCTC)n Simple_repeat Simple_repeat 4 113 0 1 794 4742 25 9 10 chrUextra 27402437 27403015 -1601641 + ROO_I LTR Pao 3468 4044 -4212 1 794 5204 0 0 2 chrUextra 27403115 27403689 -1600967 + ROO_I LTR Pao 3202 3774 -4482 1 794 5363 2 2 0 chrUextra 27403793 27404371 -1600285 + SSU-rRNA_Dme rRNA rRNA 1323 1901 -94 1 794 32 0 0 0 chrUextra 27404778 27404810 -1599846 + AT_rich Low_complexity Low_complexity 1 32 0 1 794 999 0 0 0 chrUextra 27404942 27405049 -1599607 + SSU-rRNA_Dme rRNA rRNA 1 107 -1888 1 794 2579 105 25 9 chrUextra 27405169 27405727 -1598929 + DMSAT6 Satellite Satellite 1 566 0 1 794 5240 3 3 3 chrUextra 27405827 27406405 -1598251 + LSU-rRNA_Dme rRNA rRNA 1076 1653 -2247 1 794 23 50 0 48 chrUextra 27406889 27406952 -1597704 + AT_rich Low_complexity Low_complexity 1 60 0 1 794 389 43 0 0 chrUextra 27407036 27407083 -1597573 + Baggins1 LINE LOA 5036 5082 -371 1 794 4474 4 3 81 chrUextra 27407183 27407761 -1596895 + LSU-rRNA_Dme rRNA rRNA 1537 2069 -1831 1 794 361 164 0 0 chrUextra 27407861 27407922 -1596734 - SAR_DM Satellite Satellite -804 668 608 1 794 2231 166 7 9 chrUextra 27407935 27408362 -1596294 - SAR_DM Satellite Satellite -439 1033 608 1 794 459 125 0 0 chrUextra 27408375 27408439 -1596217 - SAR_DM Satellite Satellite -439 1033 970 1 794 2336 42 0 2 chrUextra 27408539 27409117 -1595539 + PROTOP DNA P 520 1167 -3313 1 794 2259 188 82 26 chrUextra 27409222 27409795 -1594861 - TAHRE LINE telomeric -688 9775 9171 1 794 5089 4 2 0 chrUextra 27410599 27411151 -1593505 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2080 1 794 882 0 0 0 chrUextra 27411731 27411829 -1592827 + (TCTTG)n Simple_repeat Simple_repeat 5 102 0 1 794 3695 21 104 0 chrUextra 27412607 27413185 -1591471 - R1_DM LINE R1 -39 5317 4680 1 794 1578 44 0 0 chrUextra 27413289 27413839 -1590817 + (AATAG)n Simple_repeat Simple_repeat 1 550 0 1 794 5382 2 0 0 chrUextra 27413963 27414541 -1590115 + LSU-rRNA_Dme rRNA rRNA 2709 3286 -614 1 794 2824 176 11 9 chrUextra 27414641 27415215 -1589441 - SAR_DM Satellite Satellite -651 821 247 1 794 4823 12 0 5 chrUextra 27415319 27415897 -1588759 - MAX_I LTR Pao -6917 997 423 1 794 2877 171 16 5 chrUextra 27415997 27416573 -1588083 + SAR_DM Satellite Satellite 337 918 -554 1 794 2223 69 7 0 chrUextra 27416675 27416964 -1587692 - R1_DM LINE R1 -5065 291 1 1 794 1015 26 0 0 chrUextra 27416997 27417111 -1587545 - R1_DM LINE R1 0 5356 5243 1 794 1308 0 0 0 chrUextra 27417108 27417253 -1587403 - R1_DM LINE R1 -290 5066 4922 1 794 34 24 0 0 chrUextra 27417851 27417892 -1586764 + AT_rich Low_complexity Low_complexity 1 41 0 1 794 2505 96 30 19 chrUextra 27418709 27419285 -1585371 - DMSAT6 Satellite Satellite -102 581 1 1 794 4875 0 0 43 chrUextra 27419389 27419965 -1584691 - LSU-rRNA_Dme rRNA rRNA -3293 607 57 1 794 5363 0 3 0 chrUextra 27420065 27420642 -1584014 + SSU-rRNA_Dme rRNA rRNA 1392 1970 -25 1 794 2920 168 9 9 chrUextra 27420742 27421319 -1583337 + SAR_DM Satellite Satellite 452 1028 -444 1 794 2395 174 14 5 chrUextra 27421421 27421992 -1582664 - SAR_DM Satellite Satellite -593 575 1 1 794 463 35 0 50 chrUextra 27422096 27422156 -1582500 - NTS_DM Other Other -159 81 25 1 794 22 56 0 0 chrUextra 27422182 27422218 -1582438 + AT_rich Low_complexity Low_complexity 1 36 0 1 794 3594 0 0 0 chrUextra 27422290 27422673 -1581983 - LSU-rRNA_Dme rRNA rRNA 0 3900 3518 1 794 922 10 0 0 chrUextra 27422773 27422877 -1581779 - STALKER4_LTR LTR Gypsy -298 104 1 1 794 2793 177 9 11 chrUextra 27423455 27424027 -1580629 + SAR_DM Satellite Satellite 456 1026 -446 1 794 2483 106 14 14 chrUextra 27424127 27424704 -1579952 + DMSAT6 Satellite Satellite 1 577 -69 1 794 2148 117 9 51 chrUextra 27424828 27425381 -1579275 + DMSAT6 Satellite Satellite 1 529 -3 1 794 2776 173 9 5 chrUextra 27425502 27426054 -1578602 + SAR_DM Satellite Satellite 326 879 -593 1 794 4095 92 0 28 chrUextra 27426158 27426726 -1577930 + Gypsy12_I LTR Gypsy 3323 3874 -1672 1 794 3985 19 0 53 chrUextra 27426835 27427344 -1577312 - DM176_I LTR Gypsy -5486 934 453 1 794 673 25 12 0 chrUextra 27427332 27427412 -1577244 - DM176_I LTR Gypsy -6271 149 69 1 794 202 265 0 0 chrUextra 27427547 27427596 -1577060 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 794 1746 164 49 5 chrUextra 27428189 27428766 -1575890 + SAR_DM Satellite Satellite 1 602 -677 1 794 2640 182 7 11 chrUextra 27428888 27429443 -1575213 - SAR_DM Satellite Satellite -396 1076 524 1 794 2596 95 26 16 chrUextra 27429544 27430113 -1574543 + DMSAT6 Satellite Satellite 1 574 -119 1 794 5286 7 0 0 chrUextra 27430220 27430797 -1573859 - DOC LINE Jockey -1005 3720 3144 1 794 2477 190 17 23 chrUextra 27430898 27431474 -1573182 - SAR_DM Satellite Satellite -371 1101 529 1 794 1595 35 0 5 chrUextra 27431574 27431774 -1572882 + G6_DM LINE Jockey 1844 2042 0 1 794 1413 58 0 0 chrUextra 27431789 27431963 -1572693 + DM1731_LTR LTR Copia 163 336 0 1 794 1695 5 5 0 chrUextra 27431963 27432151 -1572505 + DM1731_I LTR Copia 1 189 -3787 1 794 2791 152 19 9 chrUextra 27432971 27433501 -1571155 - SAR_DM Satellite Satellite -569 903 369 1 794 4938 40 0 0 chrUextra 27433605 27434182 -1570474 - R1_DM LINE R1 -3489 1867 1291 1 794 1158 121 0 0 chrUextra 27434284 27434508 -1570148 + (TA)n Simple_repeat Simple_repeat 1 224 0 1 794 3007 9 8 8 chrUextra 27434508 27434859 -1569797 + DM297_LTR LTR Gypsy 2 352 -62 1 794 5092 0 2 2 chrUextra 27434959 27435536 -1569120 - R1_DM LINE R1 -4149 1207 631 1 794 958 169 0 69 chrUextra 27435638 27435842 -1568814 - TART LINE telomeric -5633 8844 8655 1 794 1216 190 37 48 chrUextra 27435842 27436210 -1568446 - TAHRE LINE telomeric -3220 7243 6944 1 794 2769 171 45 7 chrUextra 27436313 27436890 -1567766 - SAR_DM Satellite Satellite -611 861 263 1 794 5252 3 2 3 chrUextra 27436990 27437567 -1567089 - LSU-rRNA_Dme rRNA rRNA -2282 1618 1043 1 794 5384 0 0 2 chrUextra 27439021 27439598 -1565058 - LSU-rRNA_Dme rRNA rRNA -477 3423 2848 1 794 296 184 77 26 chrUextra 27439698 27439776 -1564880 + CT-rich Low_complexity Low_complexity 1 82 0 1 794 4392 72 5 3 chrUextra 27440374 27440948 -1563708 - R1_DM LINE R1 -4749 607 33 1 794 23 0 0 0 chrUextra 27441121 27441144 -1563512 + AT_rich Low_complexity Low_complexity 1 23 0 1 794 1512 18 0 0 chrUextra 27441726 27441895 -1562761 - LSU-rRNA_Dme rRNA rRNA -1092 2808 2640 1 794 3659 17 0 0 chrUextra 27441893 27442302 -1562354 - R1_DM LINE R1 0 5356 4948 1 794 28 48 0 0 chrUextra 27443416 27443458 -1561198 + AT_rich Low_complexity Low_complexity 1 42 0 1 794 5190 16 0 0 chrUextra 27443755 27444330 -1560326 - LSU-rRNA_Dme rRNA rRNA -1537 2363 1789 1 794 267 239 0 0 chrUextra 27444430 27444518 -1560138 + (TTTG)n Simple_repeat Simple_repeat 1 88 0 1 794 4517 4 0 0 chrUextra 27444518 27445006 -1559650 - DMRT1B LINE R1 -14 5169 4682 1 794 936 0 0 0 chrUextra 27445106 27445210 -1559446 + (TTGTG)n Simple_repeat Simple_repeat 2 105 0 1 794 3667 2 0 2 chrUextra 27445234 27445637 -1559019 - STALKER4_LTR LTR Gypsy 0 402 1 1 794 407 0 0 0 chrUextra 27445637 27445682 -1558974 - STALKER4_I LTR Gypsy 0 6530 6486 1 794 2308 13 16 7 chrUextra 27445782 27446087 -1558569 + STALKER4_I LTR Gypsy 6223 6530 0 1 794 688 48 0 0 chrUextra 27446087 27446170 -1558486 + STALKER4_LTR LTR Gypsy 1 83 -319 1 794 1702 16 0 0 chrUextra 27446165 27446358 -1558298 - STALKER4_I LTR Gypsy -1740 4790 4598 1 794 202 265 0 0 chrUextra 27446469 27446518 -1558138 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 794 1521 33 0 2 chrUextra 27447134 27447710 -1556946 + (CTATT)n Simple_repeat Simple_repeat 1 575 0 1 794 299 132 19 0 chrUextra 27447810 27447863 -1556793 - ARS406_DM Unknown Unknown -299 54 1 1 794 2796 173 9 5 chrUextra 27447823 27448386 -1556270 + SAR_DM Satellite Satellite 246 810 -662 1 794 574 0 0 0 chrUextra 27448486 27448553 -1556103 + R2_DM LINE R2 3541 3607 0 1 794 4599 4 0 4 chrUextra 27448556 27449062 -1555594 + LSU-rRNA_Dme rRNA rRNA 2578 3081 -819 1 794 4828 14 9 0 chrUextra 27449162 27449738 -1554918 + STALKER4_I LTR Gypsy 1138 1718 -4812 1 794 2725 183 7 5 chrUextra 27449838 27450414 -1554242 - SAR_DM Satellite Satellite -676 796 220 1 794 2880 170 9 7 chrUextra 27450515 27451089 -1553567 + SAR_DM Satellite Satellite 278 852 -620 1 794 2602 96 9 23 chrUextra 27451210 27451766 -1552890 - DMSAT6 Satellite Satellite -7 547 1 1 794 423 129 23 46 chrUextra 27452544 27452674 -1551982 + CT-rich Low_complexity Low_complexity 4 130 0 1 794 882 90 11 43 chrUextra 27452674 27452860 -1551796 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 794 268 132 0 50 chrUextra 27452860 27452892 -1551764 + polypyrimidine Low_complexity Low_complexity 48 77 0 1 794 860 117 0 12 chrUextra 27452892 27453065 -1551591 + (CATCT)n Simple_repeat Simple_repeat 3 173 0 1 794 268 132 0 50 chrUextra 27453065 27453112 -1551544 + polypyrimidine Low_complexity Low_complexity 2 47 0 1 794 5230 2 0 3 chrUextra 27453221 27453791 -1550865 - R1_DM LINE R1 0 5356 4789 1 794 2539 96 11 21 chrUextra 27453894 27454470 -1550186 - DMSAT6 Satellite Satellite -86 570 1 1 794 261 0 0 0 chrUextra 27455246 27455275 -1549381 + (TTCTC)n Simple_repeat Simple_repeat 4 32 0 1 794 2517 95 3 40 chrUextra 27456600 27457174 -1547482 - DMSAT6 Satellite Satellite -149 552 1 1 794 1989 0 0 0 chrUextra 27457274 27457486 -1547170 - TABOR_LTR LTR Gypsy -294 212 1 1 794 2152 104 0 6 chrUextra 27457484 27457850 -1546806 - TABOR_I LTR Gypsy 0 6336 5973 1 794 2681 182 11 7 chrUextra 27457952 27458526 -1546130 - SAR_DM Satellite Satellite -641 831 256 1 794 3668 58 32 18 chrUextra 27458626 27459119 -1545537 - R1_DM LINE R1 -4589 767 268 1 794 672 71 0 0 chrUextra 27459118 27459202 -1545454 - R1_DM LINE R1 -1442 3914 3831 1 794 2543 175 23 13 chrUextra 27459302 27459859 -1544797 + SAR_DM Satellite Satellite 514 1076 -396 1 794 504 174 87 0 chrUextra 27460001 27460116 -1544540 - NTS_DM Other Other -112 128 4 1 794 1358 6 0 24 chrUextra 27460226 27460392 -1544264 - NTS_DM Other Other -78 162 1 1 794 1209 6 25 19 chrUextra 27460392 27460554 -1544102 - NTS_DM Other Other 0 240 78 1 794 2764 179 12 5 chrUextra 27460655 27461229 -1543427 - SAR_DM Satellite Satellite -645 827 250 1 794 1249 293 177 14 chrUextra 27461337 27461896 -1542760 - FROGGER_I LTR Copia -793 1284 635 1 794 2509 89 17 19 chrUextra 27462004 27462579 -1542077 + DMSAT6 Satellite Satellite 1 573 -74 1 794 2752 169 12 14 chrUextra 27462679 27463254 -1541402 + SAR_DM Satellite Satellite 378 951 -521 1 794 2659 85 31 16 chrUextra 27463354 27463929 -1540727 - DMSAT6 Satellite Satellite -67 584 1 1 794 526 32 0 0 chrUextra 27464029 27464092 -1540564 - R1_DM LINE R1 -5293 63 1 1 794 4148 25 4 0 chrUextra 27464125 27464604 -1540052 - R1_DM LINE R1 0 5356 4876 1 794 2691 78 19 11 chrUextra 27464704 27465279 -1539377 + DMSAT6 Satellite Satellite 1 580 -74 1 794 32 0 0 0 chrUextra 27466142 27466174 -1538482 + AT_rich Low_complexity Low_complexity 1 32 0 1 794 2922 3 0 6 chrUextra 27466306 27466629 -1538027 + SSU-rRNA_Dme rRNA rRNA 1 321 -1674 1 794 322 235 99 0 chrUextra 27466788 27466950 -1537706 + (TCTTG)n Simple_repeat Simple_repeat 3 180 0 1 794 364 217 106 0 chrUextra 27466957 27467158 -1537498 + (TCTTG)n Simple_repeat Simple_repeat 1 222 0 1 794 279 219 92 18 chrUextra 27467056 27467219 -1537437 + (TTCTG)n Simple_repeat Simple_repeat 5 179 0 1 794 5275 3 0 0 chrUextra 27467405 27467979 -1536677 - DOC2_DM LINE Jockey -282 4511 3938 1 794 5287 2 0 0 chrUextra 27468079 27468654 -1536002 - R1_DM LINE R1 -3455 1901 1327 1 794 2624 105 5 35 chrUextra 27468757 27469329 -1535327 - DMSAT6 Satellite Satellite -3 555 1 1 794 5071 5 2 7 chrUextra 27469429 27470004 -1534652 + R1_DM LINE R1 3635 4206 -1150 1 794 313 147 0 21 chrUextra 27470104 27470175 -1534481 + GA-rich Low_complexity Low_complexity 2 71 0 1 794 1071 94 0 0 chrUextra 27470175 27470355 -1534301 + (ATAAG)n Simple_repeat Simple_repeat 1 180 0 1 794 313 147 0 21 chrUextra 27470355 27470380 -1534276 + polypurine Low_complexity Low_complexity 72 96 0 1 794 864 61 0 0 chrUextra 27470387 27470502 -1534154 + (ATAAG)n Simple_repeat Simple_repeat 4 118 0 1 794 369 123 0 0 chrUextra 27470502 27470567 -1534089 + (ATATG)n Simple_repeat Simple_repeat 2 66 0 1 794 780 71 0 0 chrUextra 27470567 27470679 -1533977 + (ATAAG)n Simple_repeat Simple_repeat 5 116 0 1 794 1347 68 0 0 chrUextra 27470780 27471239 -1533417 + (TTGTG)n Simple_repeat Simple_repeat 1 459 0 1 794 543 180 0 0 chrUextra 27471243 27471354 -1533302 + (CAACG)n Simple_repeat Simple_repeat 2 112 0 1 794 2553 100 20 27 chrUextra 27471454 27472018 -1532638 - DMSAT6 Satellite Satellite -90 559 1 1 794 4231 71 2 24 chrUextra 27472129 27472704 -1531952 - R1_DM LINE R1 -4546 810 249 1 794 2787 177 9 7 chrUextra 27472806 27473376 -1531280 - SAR_DM Satellite Satellite -620 852 282 1 794 2613 78 36 20 chrUextra 27473493 27474053 -1530603 - DMSAT6 Satellite Satellite -3 569 1 1 794 2656 69 14 57 chrUextra 27474154 27474711 -1529945 + DMSAT6 Satellite Satellite 1 533 -69 1 794 3733 0 2 55 chrUextra 27475504 27475955 -1528701 - LSU-rRNA_Dme rRNA rRNA -3473 427 1 1 794 21 95 0 0 chrUextra 27475967 27476030 -1528626 + AT_rich Low_complexity Low_complexity 1 63 0 1 794 2360 111 37 12 chrUextra 27476179 27476754 -1527902 - DMSAT6 Satellite Satellite -32 589 1 1 794 879 19 0 0 chrUextra 27477529 27477634 -1527022 + (TTCTC)n Simple_repeat Simple_repeat 1 105 0 1 794 1230 62 0 0 chrUextra 27477635 27477812 -1526844 + (CATCT)n Simple_repeat Simple_repeat 3 179 0 1 794 1380 47 0 0 chrUextra 27477823 27478103 -1526553 + (CATCG)n Simple_repeat Simple_repeat 1 280 0 1 794 2572 92 28 9 chrUextra 27478878 27479448 -1525208 - DMSAT6 Satellite Satellite -13 581 1 1 794 5085 21 14 0 chrUextra 27479551 27480125 -1524531 - Copia2_I LTR Copia -1690 2472 1891 1 794 5265 7 0 0 chrUextra 27480225 27480799 -1523857 + R1_DM LINE R1 4278 4851 -505 1 794 1620 20 0 0 chrUextra 27480899 27481153 -1523503 + (GAGAA)n Simple_repeat Simple_repeat 1 254 0 1 794 2468 192 7 9 chrUextra 27481573 27482126 -1522530 + SAR_DM Satellite Satellite 525 1076 -396 1 794 1287 0 0 0 chrUextra 27482247 27482390 -1522266 + (GAGAA)n Simple_repeat Simple_repeat 4 146 0 1 794 5219 3 2 0 chrUextra 27482921 27483495 -1521161 - FW_DM LINE Jockey -987 3705 3131 1 794 5209 2 3 0 chrUextra 27483595 27484161 -1520495 - LSU-rRNA_Dme rRNA rRNA -1545 2355 1788 1 794 3816 116 7 2 chrUextra 27484269 27484840 -1519816 + S_DM DNA Tc1 916 1489 -247 1 794 266 196 0 19 chrUextra 27485687 27485739 -1518917 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 794 266 196 0 19 chrUextra 27485779 27485831 -1518825 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 794 266 196 0 19 chrUextra 27485871 27485923 -1518733 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 794 277 176 0 19 chrUextra 27485954 27486006 -1518650 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 794 22 56 0 0 chrUextra 27486019 27486055 -1518601 + AT_rich Low_complexity Low_complexity 1 36 0 1 794 913 9 0 27 chrUextra 27486081 27486191 -1518465 + NTS_DM Other Other 25 131 -109 1 794 277 176 0 19 chrUextra 27486336 27486388 -1518268 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 794 236 196 0 38 chrUextra 27486419 27486472 -1518184 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 794 266 196 0 19 chrUextra 27486512 27486564 -1518092 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 794 266 196 0 19 chrUextra 27486604 27486656 -1518000 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 794 1016 0 0 0 chrUextra 27486757 27486865 -1517791 - LSU-rRNA_Dme rRNA rRNA 0 3900 3793 1 794 4976 37 0 0 chrUextra 27486965 27487539 -1517117 - R1_DM LINE R1 -3342 2014 1441 1 794 1704 25 16 37 chrUextra 27487659 27487904 -1516752 - NTS_DM Other Other 0 240 1 1 794 1866 21 17 17 chrUextra 27487904 27488144 -1516512 - NTS_DM Other Other 0 240 1 1 794 458 15 58 43 chrUextra 27488144 27488213 -1516443 - NTS_DM Other Other 0 240 171 1 794 5172 3 0 0 chrUextra 27488322 27488887 -1515769 + DMRT1B LINE R1 4480 5044 -139 1 794 2474 110 18 49 chrUextra 27489006 27489561 -1515095 - DMSAT6 Satellite Satellite 0 538 1 1 794 2737 242 17 9 chrUextra 27489662 27490909 -1513747 - SAR_DM Satellite Satellite -435 1257 1 1 794 2333 184 51 23 chrUextra 27491010 27491582 -1513074 - SAR_DM Satellite Satellite -371 1101 514 1 794 32 0 0 0 chrUextra 27491981 27492013 -1512643 + AT_rich Low_complexity Low_complexity 1 32 0 1 794 1041 0 0 0 chrUextra 27492145 27492257 -1512399 + SSU-rRNA_Dme rRNA rRNA 1 112 -1883 1 794 985 71 8 19 chrUextra 27492357 27492931 -1511725 + RSP Satellite Satellite 1 568 0 1 794 5262 0 0 2 chrUextra 27493031 27493605 -1511051 + R1_DM LINE R1 2822 3394 -1962 1 794 2152 194 73 14 chrUextra 27493708 27494277 -1510379 - TART LINE telomeric -4998 9479 8950 1 794 2676 85 13 30 chrUextra 27494383 27494940 -1509716 + DMSAT6 Satellite Satellite 1 547 -29 1 794 1448 51 23 0 chrUextra 27495450 27495627 -1509029 + PROTOP DNA P 74 254 -4226 1 794 5282 3 0 0 chrUextra 27495727 27496300 -1508356 - R1_DM LINE R1 -1642 3714 3142 1 794 1570 156 16 7 chrUextra 27496400 27496703 -1507953 - SAR_DM Satellite Satellite -671 801 496 1 794 1140 187 12 4 chrUextra 27496717 27496969 -1507687 - SAR_DM Satellite Satellite -683 789 536 1 794 5229 0 12 0 chrUextra 27497073 27497646 -1507010 - ROO_I LTR Pao -365 7891 7312 1 794 5073 0 0 2 chrUextra 27498419 27498992 -1505664 + ROO_I LTR Pao 811 1382 -6874 1 794 32 0 0 0 chrUextra 27499241 27499273 -1505383 + AT_rich Low_complexity Low_complexity 1 32 0 1 794 28 48 0 0 chrUextra 27499602 27499644 -1505012 + AT_rich Low_complexity Low_complexity 1 42 0 1 794 823 218 4 22 chrUextra 27499770 27499815 -1504841 - SAR_DM Satellite Satellite -425 1047 822 1 794 1201 93 0 11 chrUextra 27499815 27500000 -1504656 + ARS406_DM Unknown Unknown 1 183 -170 1 794 1613 170 15 9 chrUextra 27500000 27500338 -1504318 - SAR_DM Satellite Satellite -651 821 482 1 794 4679 2 0 2 chrUextra 27500438 27500945 -1503711 + LSU-rRNA_Dme rRNA rRNA 2142 2647 -1253 1 794 612 0 0 0 chrUextra 27500944 27501011 -1503645 + R1_DM LINE R1 3472 3538 -1818 1 794 396 0 0 0 chrUextra 27501111 27501155 -1503501 + (TTCTC)n Simple_repeat Simple_repeat 2 45 0 1 794 342 0 0 0 chrUextra 27501167 27501205 -1503451 + (GAGAA)n Simple_repeat Simple_repeat 4 41 0 1 794 2685 171 14 11 chrUextra 27501784 27502356 -1502300 + SAR_DM Satellite Satellite 467 1040 -432 1 794 861 11 0 0 chrUextra 27503130 27503224 -1501432 - NTS_DM Other Other -146 94 1 1 794 1790 38 17 17 chrUextra 27503224 27503464 -1501192 - NTS_DM Other Other 0 240 1 1 794 1332 81 10 5 chrUextra 27503467 27503666 -1500990 - NTS_DM Other Other -3 237 38 1 794 268 0 0 0 chrUextra 27503666 27503703 -1500953 - NTS_DM Other Other -107 133 97 1 794 4064 51 30 12 chrUextra 27503803 27504376 -1500280 + PROTOP DNA P 219 801 -3679 1 794 2483 10 0 7 chrUextra 27504476 27504777 -1499879 + DOC LINE Jockey 4427 4725 0 1 794 2256 23 0 11 chrUextra 27504780 27505049 -1499607 + Gypsy12_LTR LTR Gypsy 1138 1403 -933 1 794 2847 168 9 11 chrUextra 27505150 27505722 -1498934 - SAR_DM Satellite Satellite -432 1040 470 1 794 1803 170 4 7 chrUextra 27505834 27506395 -1498261 - SAR_DM Satellite Satellite -569 558 1 1 794 4196 70 82 0 chrUextra 27506495 27507068 -1497588 + Baggins1 LINE LOA 4283 4902 -551 1 794 25 31 0 0 chrUextra 27507223 27507255 -1497401 + AT_rich Low_complexity Low_complexity 1 32 0 1 794 1463 0 21 16 chrUextra 27508514 27508701 -1495955 + NTS_DM Other Other 53 240 0 1 794 1986 0 17 13 chrUextra 27508701 27508940 -1495716 + NTS_DM Other Other 1 240 0 1 794 1247 7 14 0 chrUextra 27508940 27509087 -1495569 + NTS_DM Other Other 1 149 -91 1 794 3974 22 2 2 chrUextra 27509187 27509642 -1495014 + SSU-rRNA_Dme rRNA rRNA 1541 1995 0 1 794 2562 89 14 43 chrUextra 27509878 27510433 -1494223 - DMSAT6 Satellite Satellite 0 538 1 1 794 2641 100 5 23 chrUextra 27510533 27511106 -1493550 + DMSAT6 Satellite Satellite 1 563 -267 1 794 3567 3 0 8 chrUextra 27511207 27511597 -1493059 + DMRT1B LINE R1 4797 5183 0 1 794 1521 0 0 0 chrUextra 27511610 27511779 -1492877 + (CACAA)n Simple_repeat Simple_repeat 4 172 0 1 794 2576 100 21 5 chrUextra 27511879 27512452 -1492204 + DMSAT6 Satellite Satellite 1 581 -108 1 794 829 130 55 4 chrUextra 27512554 27513119 -1491537 + CT-rich Low_complexity Low_complexity 1 594 0 1 794 22 56 0 0 chrUextra 27513225 27513261 -1491395 + AT_rich Low_complexity Low_complexity 1 36 0 1 794 277 176 0 19 chrUextra 27513274 27513326 -1491330 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 794 266 196 0 19 chrUextra 27513357 27513409 -1491247 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 794 266 196 0 19 chrUextra 27513449 27513501 -1491155 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 794 266 196 0 19 chrUextra 27513541 27513593 -1491063 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 794 936 0 0 10 chrUextra 27513694 27513798 -1490858 - LSU-rRNA_Dme rRNA rRNA 0 3900 3798 1 794 5314 0 0 2 chrUextra 27513898 27514471 -1490185 - SSU-rRNA_Dme rRNA rRNA -874 1121 550 1 794 2625 92 29 16 chrUextra 27514571 27515115 -1489541 - DMSAT6 Satellite Satellite -101 551 1 1 794 1530 16 0 0 chrUextra 27515244 27515491 -1489165 + (TATAA)n Simple_repeat Simple_repeat 1 247 0 1 794 1557 23 0 0 chrUextra 27515516 27515817 -1488839 + (TATAA)n Simple_repeat Simple_repeat 1 301 0 1 794 58 15 0 0 chrUextra 27516366 27516431 -1488225 + AT_rich Low_complexity Low_complexity 1 65 0 1 794 34 24 0 0 chrUextra 27517443 27517484 -1487172 + AT_rich Low_complexity Low_complexity 1 41 0 1 794 21 95 0 0 chrUextra 27517697 27517760 -1486896 + AT_rich Low_complexity Low_complexity 1 63 0 1 794 563 0 0 0 chrUextra 27517772 27517833 -1486823 + LSU-rRNA_Dme rRNA rRNA 1 61 -3839 1 794 841 26 0 8 chrUextra 27518605 27518722 -1485934 + NTS_DM Other Other 86 201 -39 1 794 21 57 0 0 chrUextra 27518722 27518757 -1485899 + AT_rich Low_complexity Low_complexity 1 35 0 1 794 847 28 9 27 chrUextra 27518783 27518894 -1485762 + NTS_DM Other Other 25 133 -107 1 794 826 21 0 0 chrUextra 27518894 27518990 -1485666 + NTS_DM Other Other 38 133 -107 1 794 1279 44 21 21 chrUextra 27518990 27519177 -1485479 + NTS_DM Other Other 38 224 -16 1 794 1587 4 0 0 chrUextra 27519277 27519521 -1485135 + (GAGAA)n Simple_repeat Simple_repeat 1 244 0 1 794 5204 11 0 0 chrUextra 27519949 27520521 -1484135 - DMRT1A LINE R1 -2907 2276 1705 1 794 264 190 95 60 chrUextra 27520789 27520873 -1483783 - DNAREP1_DM LINE Penelope -83 511 425 1 794 24 0 0 0 chrUextra 27520901 27520925 -1483731 + AT_rich Low_complexity Low_complexity 1 24 0 1 794 22 0 0 0 chrUextra 27521170 27521192 -1483464 + AT_rich Low_complexity Low_complexity 1 22 0 1 794 2578 189 9 7 chrUextra 27521295 27521865 -1482791 + SAR_DM Satellite Satellite 230 800 -672 1 794 5234 2 0 2 chrUextra 27521965 27522537 -1482119 - R1_DM LINE R1 -1963 3393 2823 1 794 2959 73 74 2 chrUextra 27522637 27523209 -1481447 + PROTOP DNA P 234 753 -3727 1 794 2782 169 11 11 chrUextra 27523311 27523881 -1480775 - SAR_DM Satellite Satellite -514 958 389 1 794 202 265 0 0 chrUextra 27524008 27524057 -1480599 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 794 1011 160 0 0 chrUextra 27524653 27524865 -1479791 + CT-rich Low_complexity Low_complexity 1 212 0 1 795 2549 81 28 47 chrUextra 27525325 27525895 -1478761 + DMSAT6 Satellite Satellite 1 558 -85 1 795 1521 17 0 0 chrUextra 27526315 27526495 -1478161 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 795 339 44 0 0 chrUextra 27526524 27526569 -1478087 + (GAGAA)n Simple_repeat Simple_repeat 5 49 0 1 795 851 10 0 10 chrUextra 27526669 27526770 -1477886 + LSU-rRNA_Dme rRNA rRNA 1692 1791 -2109 1 795 4002 2 0 0 chrUextra 27526812 27527241 -1477415 + LSU-rRNA_Dme rRNA rRNA 1788 2216 -1684 1 795 2547 91 10 26 chrUextra 27527341 27527913 -1476743 - DMSAT6 Satellite Satellite -68 563 1 1 795 2881 0 0 0 chrUextra 27528013 27528363 -1476293 + HMSBEAGLE_I LTR Gypsy 438 787 -5742 1 795 677 33 49 16 chrUextra 27528379 27528501 -1476155 + (TTA)n Simple_repeat Simple_repeat 3 128 0 1 795 747 12 0 0 chrUextra 27528501 27528585 -1476071 + HMSBEAGLE_I LTR Gypsy 976 1059 -5470 1 795 2394 107 7 50 chrUextra 27528686 27529229 -1475427 + DMSAT6 Satellite Satellite 1 519 -399 1 795 435 37 0 0 chrUextra 27529357 27529411 -1475245 - ARS406_DM Unknown Unknown -217 136 83 1 795 2412 190 6 6 chrUextra 27529410 27529929 -1474727 + SAR_DM Satellite Satellite 399 917 -555 1 795 450 0 0 0 chrUextra 27530029 27530079 -1474577 + (TTCTC)n Simple_repeat Simple_repeat 5 54 0 1 795 2634 175 11 12 chrUextra 27530701 27531261 -1473395 + SAR_DM Satellite Satellite 518 1076 -396 1 795 2615 92 29 34 chrUextra 27531373 27531930 -1472726 - DMSAT6 Satellite Satellite -153 553 1 1 795 4997 16 0 0 chrUextra 27532045 27532617 -1472039 - MDG1_I LTR Gypsy -3757 2839 2268 1 795 2610 101 20 14 chrUextra 27532717 27533277 -1471379 + DMSAT6 Satellite Satellite 1 562 -74 1 795 2583 183 7 25 chrUextra 27533394 27533959 -1470697 + SAR_DM Satellite Satellite 536 1090 -382 1 795 2319 14 0 78 chrUextra 27534760 27535067 -1469589 - DM176_LTR LTR Gypsy -224 283 1 1 795 2077 8 0 0 chrUextra 27535067 27535305 -1469351 - DM176_I LTR Gypsy 0 6420 6183 1 795 5054 5 49 0 chrUextra 27535405 27535977 -1468679 - DM176_I LTR Gypsy -5191 1229 630 1 795 2522 102 19 44 chrUextra 27536085 27536649 -1468007 + DMSAT6 Satellite Satellite 1 550 0 1 795 4782 33 26 0 chrUextra 27536749 27537321 -1467335 + R1_DM LINE R1 4552 5138 -218 1 795 202 265 0 0 chrUextra 27537923 27537972 -1466684 + (CAG)n Simple_repeat Simple_repeat 2 50 0 1 795 2603 167 26 19 chrUextra 27538099 27539334 -1465322 + DMSAT6 Satellite Satellite 1 1244 0 1 795 1538 179 9 8 chrUextra 27539481 27540000 -1464656 + SAR_DM Satellite Satellite 1 519 -1005 1 795 2689 87 21 12 chrUextra 27540107 27540678 -1463978 + DMSAT6 Satellite Satellite 1 576 0 1 795 2584 171 30 16 chrUextra 27541455 27542020 -1462636 - SAR_DM Satellite Satellite -478 994 422 1 795 2754 89 18 12 chrUextra 27542120 27542691 -1461965 + DMSAT6 Satellite Satellite 1 574 -69 1 795 777 178 7 7 chrUextra 27543462 27543615 -1461041 - SAR_DM Satellite Satellite -704 768 616 1 795 579 15 0 0 chrUextra 27544133 27544201 -1460455 + (TTCTC)n Simple_repeat Simple_repeat 2 69 0 1 795 360 0 0 0 chrUextra 27544804 27544844 -1459812 + (GAGAA)n Simple_repeat Simple_repeat 2 41 0 1 795 499 125 0 0 chrUextra 27545482 27545570 -1459086 - MDG1_LTR LTR Gypsy -316 126 39 1 795 1620 15 0 0 chrUextra 27545570 27545838 -1458818 + (TTA)n Simple_repeat Simple_repeat 1 268 0 1 795 463 83 12 226 chrUextra 27545842 27546043 -1458613 - MDG1_I LTR Gypsy -97 6800 6452 1 795 770 293 43 45 chrUextra 27546146 27546682 -1457974 - SAR_DM Satellite Satellite -730 742 208 1 795 5243 2 3 0 chrUextra 27546819 27547388 -1457268 - LSU-rRNA_Dme rRNA rRNA -1531 2369 1799 1 795 1736 173 12 8 chrUextra 27548162 27548730 -1455926 - SAR_DM Satellite Satellite -514 569 1 1 795 1041 97 0 0 chrUextra 27549514 27550052 -1454604 + (CAAGA)n Simple_repeat Simple_repeat 1 538 0 1 795 258 81 0 0 chrUextra 27550677 27550714 -1453942 + (TC)n Simple_repeat Simple_repeat 1 37 0 1 795 894 10 0 0 chrUextra 27550843 27550946 -1453710 + R2_DM LINE R2 3505 3607 0 1 795 663 38 0 12 chrUextra 27550957 27551037 -1453619 + LSU-rRNA_Dme rRNA rRNA 2578 2656 -1244 1 795 3548 5 0 0 chrUextra 27551028 27551414 -1453242 + R1_DM LINE R1 4828 5213 -143 1 795 5307 0 2 2 chrUextra 27551514 27552085 -1452571 + LSU-rRNA_Dme rRNA rRNA 3038 3608 -292 1 795 2867 166 9 5 chrUextra 27552856 27553424 -1451232 - SAR_DM Satellite Satellite -610 862 293 1 795 5254 0 0 2 chrUextra 27553527 27554098 -1450558 - R1_DM LINE R1 -3149 2207 1638 1 795 1354 62 0 15 chrUextra 27554226 27554769 -1449887 + (AATAG)n Simple_repeat Simple_repeat 1 535 0 1 795 960 0 0 0 chrUextra 27554869 27554971 -1449685 - LSU-rRNA_Dme rRNA rRNA -2011 1889 1788 1 795 3826 2 7 2 chrUextra 27555012 27555440 -1449216 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1362 1 795 4608 30 0 2 chrUextra 27555540 27556111 -1448545 - ROO_I LTR Pao -35 8221 7652 1 795 34 24 0 0 chrUextra 27556386 27556427 -1448229 + AT_rich Low_complexity Low_complexity 1 41 0 1 795 514 133 80 0 chrUextra 27556438 27556551 -1448105 - TART LINE telomeric -3986 10491 10370 1 795 609 249 96 18 chrUextra 27556551 27556780 -1447876 - TAHRE LINE telomeric -374 10089 9843 1 795 2446 176 35 25 chrUextra 27556888 27557453 -1447203 - SAR_DM Satellite Satellite -696 776 206 1 795 4659 0 0 47 chrUextra 27557553 27558124 -1446532 + LSU-rRNA_Dme rRNA rRNA 152 695 -3205 1 795 5099 21 0 0 chrUextra 27558224 27558795 -1445861 - DMCR1A LINE CR1 -1545 2925 2355 1 795 5170 0 3 2 chrUextra 27558895 27559466 -1445190 + R1_DM LINE R1 2544 3115 -2241 1 795 4905 21 45 0 chrUextra 27559566 27560137 -1444519 - R1_DM LINE R1 -753 4603 4007 1 795 5002 25 0 0 chrUextra 27560238 27560807 -1443849 + R1_DM LINE R1 2368 2936 -2420 1 795 5311 0 3 0 chrUextra 27560907 27561477 -1443179 - LSU-rRNA_Dme rRNA rRNA -32 3868 3297 1 795 34 24 0 0 chrUextra 27561782 27561823 -1442833 + AT_rich Low_complexity Low_complexity 1 41 0 1 795 21 95 0 0 chrUextra 27562036 27562099 -1442557 + AT_rich Low_complexity Low_complexity 1 63 0 1 795 316 0 0 0 chrUextra 27562111 27562147 -1442509 + LSU-rRNA_Dme rRNA rRNA 1 36 -3864 1 795 1283 19 0 12 chrUextra 27562247 27562410 -1442246 - NTS_DM Other Other -42 198 38 1 795 945 0 0 27 chrUextra 27562410 27562522 -1442134 - NTS_DM Other Other -107 133 25 1 795 1332 18 0 6 chrUextra 27562574 27562739 -1441917 - NTS_DM Other Other -39 201 38 1 795 606 13 0 13 chrUextra 27562739 27562817 -1441839 - NTS_DM Other Other -107 133 57 1 795 1603 152 12 7 chrUextra 27562917 27563487 -1441169 + SAR_DM Satellite Satellite 1 572 -841 1 795 776 0 0 0 chrUextra 27564257 27564340 -1440316 - R1_DM LINE R1 -434 4922 4840 1 795 4554 2 0 0 chrUextra 27564337 27564827 -1439829 - LSU-rRNA_Dme rRNA rRNA -1262 2638 2149 1 795 403 22 0 0 chrUextra 27564927 27564972 -1439684 - NTS_DM Other Other -195 45 1 1 795 1863 21 17 17 chrUextra 27564972 27565212 -1439444 - NTS_DM Other Other 0 240 1 1 795 1858 21 17 17 chrUextra 27565212 27565452 -1439204 - NTS_DM Other Other 0 240 1 1 795 249 0 89 67 chrUextra 27565452 27565497 -1439159 - NTS_DM Other Other 0 240 195 1 795 1284 32 0 0 chrUextra 27565598 27565752 -1438904 - NTS_DM Other Other -86 154 1 1 795 1834 21 17 21 chrUextra 27565752 27565993 -1438663 - NTS_DM Other Other 0 240 1 1 795 1178 41 23 23 chrUextra 27565993 27566167 -1438489 - NTS_DM Other Other 0 240 67 1 795 5198 0 2 5 chrUextra 27566267 27566837 -1437819 + SSU-rRNA_Dme rRNA rRNA 803 1370 -625 1 795 5017 5 0 2 chrUextra 27566937 27567507 -1437149 - DM297_I LTR Gypsy -948 5219 4651 1 795 5218 2 2 3 chrUextra 27567607 27568177 -1436479 - SSU-rRNA_Dme rRNA rRNA -277 1718 1150 1 795 4661 33 0 0 chrUextra 27568279 27568824 -1435832 + G2_DM LINE Jockey 2547 3091 -11 1 795 2469 188 33 2 chrUextra 27569640 27570183 -1434473 + SAR_DM Satellite Satellite 332 891 -581 1 795 5065 3 0 3 chrUextra 27570287 27570857 -1433799 + LSU-rRNA_Dme rRNA rRNA 488 1055 -2845 1 795 4953 21 2 2 chrUextra 27570959 27571527 -1433129 - R1_DM LINE R1 -1378 3978 3411 1 795 2837 89 12 14 chrUextra 27571628 27572197 -1432459 + DMSAT6 Satellite Satellite 1 568 -108 1 795 3875 11 121 2 chrUextra 27572297 27572867 -1431789 + R1_DM LINE R1 3515 4152 -1204 1 795 2179 202 33 11 chrUextra 27572967 27573537 -1431119 - SAR_DM Satellite Satellite -682 790 208 1 795 1804 0 10 0 chrUextra 27573643 27573838 -1430818 + LSU-rRNA_Dme rRNA rRNA 2452 2648 -1252 1 795 3254 13 0 3 chrUextra 27573835 27574207 -1430449 + R1_DM LINE R1 515 885 -4471 1 795 2643 177 11 7 chrUextra 27574307 27574875 -1429781 + SAR_DM Satellite Satellite 301 870 -602 1 795 2703 180 28 14 chrUextra 27575647 27576216 -1428440 + SAR_DM Satellite Satellite 429 1005 -467 1 795 1620 0 0 0 chrUextra 27576987 27577295 -1427361 + (CAAAA)n Simple_repeat Simple_repeat 1 308 0 1 795 648 0 0 0 chrUextra 27578155 27578227 -1426429 + (GAGAA)n Simple_repeat Simple_repeat 2 73 0 1 795 280 59 0 0 chrUextra 27578997 27579031 -1425625 - BATUMI_I LTR Pao -4075 3888 3855 1 795 364 70 0 50 chrUextra 27579043 27579100 -1425556 - BATUMI_I LTR Pao -908 7055 7002 1 795 3515 67 0 4 chrUextra 27579100 27579552 -1425104 - BATUMI_I LTR Pao 0 7963 7514 1 795 30 0 0 0 chrUextra 27579737 27579767 -1424889 + AT_rich Low_complexity Low_complexity 1 30 0 1 795 28 48 0 0 chrUextra 27580095 27580137 -1424519 + AT_rich Low_complexity Low_complexity 1 42 0 1 795 4642 19 2 2 chrUextra 27580337 27580907 -1423749 - IDEFIX_I LTR Gypsy -221 5407 4838 1 795 237 33 0 0 chrUextra 27581307 27581337 -1423319 + (A)n Simple_repeat Simple_repeat 1 30 0 1 795 408 0 134 0 chrUextra 27581680 27581792 -1422864 + (GA)n Simple_repeat Simple_repeat 2 128 0 1 795 5203 2 2 2 chrUextra 27582347 27582917 -1421739 - R1_DM LINE R1 -3191 2165 1596 1 795 4647 55 3 0 chrUextra 27583687 27584256 -1420400 - BATUMI_I LTR Pao -3024 4939 4369 1 795 5282 2 2 2 chrUextra 27584356 27584925 -1419731 + LSU-rRNA_Dme rRNA rRNA 2966 3534 -366 1 795 1620 0 0 0 chrUextra 27585025 27585239 -1419417 + (CAAGA)n Simple_repeat Simple_repeat 1 214 0 1 795 2558 105 15 50 chrUextra 27585697 27586239 -1418417 - DMSAT6 Satellite Satellite -147 523 1 1 795 531 0 0 0 chrUextra 27586363 27586422 -1418234 + (CAATA)n Simple_repeat Simple_repeat 2 60 0 1 795 1503 42 2 0 chrUextra 27586428 27586932 -1417724 + (AATAG)n Simple_repeat Simple_repeat 1 505 0 1 795 5195 0 3 3 chrUextra 27587032 27587601 -1417055 + SSU-rRNA_Dme rRNA rRNA 1129 1697 -298 1 795 2466 89 18 47 chrUextra 27587701 27588260 -1416396 - DMSAT6 Satellite Satellite -73 543 1 1 795 4890 25 0 2 chrUextra 27588370 27588936 -1415720 + NINJA_I LTR Pao 320 884 -5127 1 795 2297 19 22 0 chrUextra 27589039 27589309 -1415347 + QUASIMODO_LTR LTR Gypsy 248 523 -135 1 795 2717 3 0 0 chrUextra 27589308 27589608 -1415048 + QUASIMODO_I LTR Gypsy 1850 2149 -3911 1 795 1620 0 0 0 chrUextra 27591048 27591408 -1413248 + (GAGAA)n Simple_repeat Simple_repeat 1 360 0 1 795 21 89 0 0 chrUextra 27591924 27591980 -1412676 + AT_rich Low_complexity Low_complexity 1 56 0 1 795 2617 0 3 3 chrUextra 27591999 27592284 -1412372 - SSU-rRNA_Dme rRNA rRNA 0 1995 1711 1 795 3494 0 0 23 chrUextra 27592384 27592782 -1411874 - Stalker2_LTR LTR Gypsy -35 389 1 1 795 1272 12 0 0 chrUextra 27592782 27592950 -1411706 - Stalker2_I LTR Gypsy 0 7402 7235 1 795 371 218 27 71 chrUextra 27593053 27593236 -1411420 + (CAGA)n Simple_repeat Simple_repeat 2 176 0 1 795 299 200 90 36 chrUextra 27593419 27593585 -1411071 + (CAAGA)n Simple_repeat Simple_repeat 3 177 0 1 795 2500 99 11 32 chrUextra 27594392 27594959 -1409697 - DMSAT6 Satellite Satellite -82 554 1 1 795 27 29 0 0 chrUextra 27595243 27595277 -1409379 + AT_rich Low_complexity Low_complexity 1 34 0 1 795 2806 166 16 7 chrUextra 27595729 27596295 -1408361 - SAR_DM Satellite Satellite -620 852 282 1 795 1114 20 0 7 chrUextra 27596398 27596545 -1408111 + NTS_DM Other Other 56 201 -39 1 795 898 9 0 35 chrUextra 27596597 27596710 -1407946 + NTS_DM Other Other 25 133 -107 1 795 1332 18 0 6 chrUextra 27596710 27596875 -1407781 + NTS_DM Other Other 38 201 -39 1 795 307 0 0 75 chrUextra 27596927 27596967 -1407689 + NTS_DM Other Other 25 61 -179 1 795 2730 171 19 11 chrUextra 27597067 27597636 -1407020 + SAR_DM Satellite Satellite 446 1019 -453 1 795 232 183 32 48 chrUextra 27597736 27597799 -1406857 + HETRP_DM Satellite Satellite 1623 1684 -188 1 795 721 184 13 26 chrUextra 27597927 27598083 -1406573 + HETRP_DM Satellite Satellite 1529 1682 -190 1 795 210 37 0 0 chrUextra 27598227 27598254 -1406402 + (GA)n Simple_repeat Simple_repeat 2 28 0 1 795 234 132 0 0 chrUextra 27598254 27598292 -1406364 + HETRP_DM Satellite Satellite 1549 1586 -286 1 795 3015 34 3 3 chrUextra 27599074 27599628 -1405028 - R1_DM LINE R1 -1314 4042 3456 1 795 789 41 0 0 chrUextra 27599743 27599840 -1404816 + (CACAA)n Simple_repeat Simple_repeat 2 98 0 1 795 2005 5 0 0 chrUextra 27599840 27600061 -1404595 - DMRT1B LINE R1 -140 5043 4823 1 795 2310 0 4 0 chrUextra 27600057 27600311 -1404345 - DMRT1B LINE R1 -1103 4080 3826 1 795 1620 0 0 0 chrUextra 27600411 27600860 -1403796 + (GAGAA)n Simple_repeat Simple_repeat 1 449 0 1 795 316 320 20 85 chrUextra 27601394 27601640 -1403016 + ACCORD2_I LTR Gypsy 526 755 -6457 1 795 4404 63 44 0 chrUextra 27601747 27602315 -1402341 - R1_DM LINE R1 -4758 598 6 1 795 2697 91 12 36 chrUextra 27602416 27602976 -1401680 + DMSAT6 Satellite Satellite 1 547 -130 1 795 492 0 18 0 chrUextra 27603083 27603139 -1401517 + LSU-rRNA_Dme rRNA rRNA 3844 3900 0 1 795 266 196 0 19 chrUextra 27603241 27603293 -1401363 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 795 266 196 0 19 chrUextra 27603333 27603385 -1401271 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 795 277 176 0 19 chrUextra 27603416 27603468 -1401188 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 795 22 56 0 0 chrUextra 27603481 27603517 -1401139 + AT_rich Low_complexity Low_complexity 1 36 0 1 795 898 10 0 28 chrUextra 27603543 27603651 -1401005 + NTS_DM Other Other 25 129 -111 1 795 513 182 175 0 chrUextra 27603751 27603877 -1400779 + XDMR Unknown Unknown 214 361 0 1 795 2682 173 13 7 chrUextra 27603769 27604317 -1400339 - SAR_DM Satellite Satellite -649 823 273 1 795 2837 278 42 64 chrUextra 27605089 27606295 -1398361 + SAR_DM Satellite Satellite 90 1269 -203 1 795 926 62 0 15 chrUextra 27606191 27606323 -1398333 - ARS406_DM Unknown Unknown -164 189 60 1 795 34 24 0 0 chrUextra 27606916 27606957 -1397699 + AT_rich Low_complexity Low_complexity 1 41 0 1 795 1603 10 0 109 chrUextra 27607091 27607312 -1397344 - DOC6_DM LINE Jockey -4025 197 1 1 795 408 0 0 136 chrUextra 27607312 27607488 -1397168 + (TTA)n Simple_repeat Simple_repeat 3 154 0 1 795 551 0 131 6 chrUextra 27607499 27607659 -1396997 + (TA)n Simple_repeat Simple_repeat 1 180 0 1 795 279 0 0 0 chrUextra 27607759 27607790 -1396866 + (GAGAA)n Simple_repeat Simple_repeat 2 32 0 1 795 2482 96 7 44 chrUextra 27608451 27608995 -1395661 + DMSAT6 Satellite Satellite 1 523 0 1 795 454 113 0 0 chrUextra 27609095 27609166 -1395490 - ARS406_DM Unknown Unknown -282 71 1 1 795 2420 184 13 13 chrUextra 27609119 27609663 -1394993 + SAR_DM Satellite Satellite 239 782 -690 1 795 230 286 20 35 chrUextra 27610080 27610283 -1394373 - ZAM_I LTR Gypsy -819 6671 6472 1 795 2563 185 5 13 chrUextra 27611110 27611667 -1392989 - SAR_DM Satellite Satellite -396 1076 524 1 795 3036 156 11 7 chrUextra 27611767 27612335 -1392321 + SAR_DM Satellite Satellite 353 922 -550 1 795 406 19 0 0 chrUextra 27612438 27612490 -1392166 + ACCORD2_I LTR Gypsy 1723 1774 -5438 1 795 1116 22 223 16 chrUextra 27612501 27612685 -1391971 + ACCORD2_I LTR Gypsy 1553 1774 -5438 1 795 680 58 0 0 chrUextra 27612678 27612762 -1391894 + ACCORD2_I LTR Gypsy 7122 7205 -7 1 795 1885 14 0 18 chrUextra 27612762 27612980 -1391676 + ACCORD2_LTR LTR Gypsy 1 214 -1 1 795 5096 19 2 0 chrUextra 27613103 27613671 -1390985 + BS LINE Jockey 2069 2637 -2489 1 795 953 10 0 0 chrUextra 27613771 27613875 -1390781 - NTS_DM Other Other -136 104 1 1 795 1899 17 17 17 chrUextra 27613875 27614115 -1390541 - NTS_DM Other Other 0 240 1 1 795 1727 18 18 18 chrUextra 27614115 27614339 -1390317 - NTS_DM Other Other 0 240 17 1 795 4548 46 39 2 chrUextra 27614439 27615007 -1389649 + IDEFIX_I LTR Gypsy 1012 1600 -4028 1 795 856 106 12 19 chrUextra 27615775 27616341 -1388315 + RSP Satellite Satellite 1 562 0 1 795 5108 0 0 3 chrUextra 27616443 27617011 -1387645 - ROO_I LTR Pao -3915 4341 3776 1 795 1829 9 14 0 chrUextra 27617116 27617328 -1387328 - NTS_DM Other Other -25 215 1 1 795 1992 4 17 13 chrUextra 27617328 27617567 -1387089 - NTS_DM Other Other 0 240 1 1 795 794 9 36 27 chrUextra 27617567 27617679 -1386977 - NTS_DM Other Other 0 240 128 1 795 5181 5 0 0 chrUextra 27617789 27618347 -1386309 + SSU-rRNA_Dme rRNA rRNA 1 558 -1437 1 795 5194 0 0 0 chrUextra 27618449 27619014 -1385642 + ROO_I LTR Pao 4003 4567 -3689 1 795 5141 2 3 3 chrUextra 27619114 27619681 -1384975 + LSU-rRNA_Dme rRNA rRNA 825 1391 -2509 1 795 4801 0 0 0 chrUextra 27620448 27620971 -1383685 - R1_DM LINE R1 -1977 3379 2857 1 795 461 0 0 0 chrUextra 27620966 27621015 -1383641 - LSU-rRNA_Dme rRNA rRNA -1246 2654 2606 1 795 2546 186 14 14 chrUextra 27621115 27621682 -1382974 + SAR_DM Satellite Satellite 229 795 -677 1 795 22 56 0 0 chrUextra 27621810 27621846 -1382810 + AT_rich Low_complexity Low_complexity 1 36 0 1 795 3999 2 2 0 chrUextra 27621918 27622349 -1382307 - LSU-rRNA_Dme rRNA rRNA 0 3900 3469 1 795 2466 87 41 7 chrUextra 27622449 27623008 -1381648 - DMSAT6 Satellite Satellite -79 578 1 1 795 4558 29 7 11 chrUextra 27623783 27624344 -1380312 - BATUMI_I LTR Pao -978 6985 6427 1 795 329 27 0 0 chrUextra 27624450 27624487 -1380169 - NTS_DM Other Other -203 37 1 1 795 1444 35 20 25 chrUextra 27624487 27624691 -1379965 - NTS_DM Other Other 0 240 38 1 795 832 21 0 0 chrUextra 27624691 27624787 -1379869 - NTS_DM Other Other -107 133 38 1 795 808 46 9 27 chrUextra 27624787 27624898 -1379758 - NTS_DM Other Other -107 133 25 1 795 403 36 0 18 chrUextra 27624960 27625017 -1379639 - NTS_DM Other Other -39 201 146 1 795 4729 39 2 2 chrUextra 27625117 27625684 -1378972 - R1_DM LINE R1 -10 5346 4780 1 795 1539 0 0 0 chrUextra 27625784 27625955 -1378701 + (TAGA)n Simple_repeat Simple_repeat 1 171 0 1 795 3455 15 2 2 chrUextra 27626451 27626846 -1377810 + DM176_LTR LTR Gypsy 113 507 0 1 795 1047 135 0 0 chrUextra 27626848 27627018 -1377638 + (TA)n Simple_repeat Simple_repeat 1 170 0 1 795 34 24 0 0 chrUextra 27627493 27627534 -1377122 + AT_rich Low_complexity Low_complexity 1 41 0 1 795 2895 161 13 7 chrUextra 27627798 27628350 -1376306 + SAR_DM Satellite Satellite 369 923 -549 1 795 2399 97 34 9 chrUextra 27629119 27629682 -1374974 + DMSAT6 Satellite Satellite 1 577 -96 1 795 2474 191 28 21 chrUextra 27629786 27630981 -1373675 + DMSAT6 Satellite Satellite 1 1203 -3 1 795 4156 35 8 0 chrUextra 27631120 27631628 -1373028 - IDEFIX_I LTR Gypsy -5116 512 1 1 795 202 265 0 0 chrUextra 27631806 27631855 -1372801 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 795 4908 3 11 0 chrUextra 27632454 27633021 -1371635 - QUASIMODO_I LTR Gypsy -1355 4705 4133 1 795 1737 120 73 61 chrUextra 27633138 27633466 -1371190 + STALKER4_LTR LTR Gypsy 42 373 -29 1 795 907 135 0 19 chrUextra 27633529 27633688 -1370968 - Stalker2_I LTR Gypsy -4485 2917 2762 1 795 3395 20 13 5 chrUextra 27633788 27634182 -1370474 - LSU-rRNA_Dme rRNA rRNA -1716 2184 1788 1 795 1025 16 8 15 chrUextra 27634223 27634354 -1370302 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1662 1 795 2805 178 11 5 chrUextra 27634455 27635021 -1369635 - SAR_DM Satellite Satellite -655 817 249 1 795 1231 87 11 0 chrUextra 27636455 27636731 -1367925 + (CTATT)n Simple_repeat Simple_repeat 1 279 0 1 795 1449 47 4 0 chrUextra 27636761 27637019 -1367637 + (CTATT)n Simple_repeat Simple_repeat 1 259 0 1 795 1362 6 28 17 chrUextra 27637119 27637299 -1367357 + NTS_DM Other Other 59 240 0 1 795 1922 13 17 17 chrUextra 27637299 27637539 -1367117 + NTS_DM Other Other 1 240 0 1 795 1303 7 0 0 chrUextra 27637539 27637685 -1366971 + NTS_DM Other Other 1 146 -94 1 795 5260 3 0 0 chrUextra 27637785 27638351 -1366305 + LSU-rRNA_Dme rRNA rRNA 2027 2592 -1308 1 795 511 45 0 132 chrUextra 27638457 27638661 -1365995 + A-rich Low_complexity Low_complexity 2 178 0 1 795 588 6 0 137 chrUextra 27638687 27638892 -1365764 + (TAAAAA)n Simple_repeat Simple_repeat 2 178 0 1 795 361 141 135 0 chrUextra 27638844 27639000 -1365656 + (CAAA)n Simple_repeat Simple_repeat 3 179 0 1 795 4966 14 0 0 chrUextra 27639117 27639680 -1364976 - Gypsy4_I LTR Gypsy -840 5448 4886 1 795 1004 60 5 16 chrUextra 27640449 27641014 -1363642 + RSP Satellite Satellite 1 559 0 1 795 312 100 0 39 chrUextra 27641156 27641202 -1363454 - Gypsy_LTR LTR Gypsy -87 395 352 1 795 1822 109 3 147 chrUextra 27641202 27641577 -1363079 - Stalker3_LTR LTR Gypsy 0 372 52 1 795 269 65 36 14 chrUextra 27641600 27641674 -1362982 - STALKER4_I LTR Gypsy -5 6525 6491 1 795 1776 172 16 5 chrUextra 27641782 27642347 -1362309 + SAR_DM Satellite Satellite 1 570 -558 1 795 2556 182 6 20 chrUextra 27642449 27642999 -1361657 - SAR_DM Satellite Satellite -365 1107 566 1 795 2653 176 16 25 chrUextra 27643114 27643679 -1360977 + SAR_DM Satellite Satellite 469 1028 -444 1 795 1158 122 0 0 chrUextra 27643798 27643978 -1360678 + (TA)n Simple_repeat Simple_repeat 1 180 0 1 795 570 0 50 38 chrUextra 27644445 27644525 -1360131 + NTS_DM Other Other 160 240 0 1 795 1992 4 17 13 chrUextra 27644525 27644764 -1359892 + NTS_DM Other Other 1 240 0 1 795 1968 8 17 13 chrUextra 27644764 27645003 -1359653 + NTS_DM Other Other 1 240 0 1 795 4706 48 3 0 chrUextra 27645111 27645677 -1358979 + Stalker2_I LTR Gypsy 3855 4422 -2980 1 795 2706 176 9 14 chrUextra 27645777 27646342 -1358314 + SAR_DM Satellite Satellite 476 1037 -435 1 795 5202 3 2 0 chrUextra 27646442 27647007 -1357649 - SSU-rRNA_Dme rRNA rRNA -937 1058 493 1 795 2666 179 55 7 chrUextra 27647107 27647671 -1356985 + SAR_DM Satellite Satellite 447 1037 -435 1 795 395 0 0 162 chrUextra 27648495 27648848 -1355808 + (CATAG)n Simple_repeat Simple_repeat 1 295 0 1 795 4074 82 2 2 chrUextra 27649102 27649666 -1354990 - STALKER4_I LTR Gypsy -314 6216 5653 1 795 281 338 129 7 chrUextra 27649845 27650131 -1354525 - BLASTOPIA_I LTR Gypsy -1 4480 4160 1 795 2386 118 20 7 chrUextra 27650432 27650996 -1353660 - DMSAT6 Satellite Satellite -45 571 1 1 795 2720 183 23 25 chrUextra 27651115 27652327 -1352329 + DMSAT6 Satellite Satellite 1 1208 0 1 795 2403 93 30 30 chrUextra 27652427 27652990 -1351666 + DMSAT6 Satellite Satellite 1 563 -46 1 795 1587 30 0 0 chrUextra 27653092 27653656 -1351000 + (TAGA)n Simple_repeat Simple_repeat 1 564 0 1 795 1514 26 0 6 chrUextra 27654645 27654987 -1349669 + (CTATT)n Simple_repeat Simple_repeat 1 340 0 1 795 2542 115 25 5 chrUextra 27655087 27655652 -1349004 - DMSAT6 Satellite Satellite -3 576 1 1 99 2449 102 16 19 chrUextra 27655754 27656316 -1348340 + DMSAT6 Satellite Satellite 1 560 -119 1 796 2766 181 7 5 chrUextra 27656422 27656982 -1347674 + SAR_DM Satellite Satellite 238 798 -674 1 796 1349 47 15 25 chrUextra 27657082 27657279 -1347377 - NTS_DM Other Other -8 232 38 1 796 757 42 11 0 chrUextra 27657279 27657374 -1347282 - NTS_DM Other Other -107 133 38 1 796 741 76 19 0 chrUextra 27657374 27657479 -1347177 - NTS_DM Other Other -107 133 27 1 796 21 57 0 0 chrUextra 27657510 27657545 -1347111 + AT_rich Low_complexity Low_complexity 1 35 0 1 796 677 40 10 10 chrUextra 27657545 27657647 -1347009 - NTS_DM Other Other -39 201 100 1 796 202 265 0 0 chrUextra 27658437 27658486 -1346170 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 796 4899 14 2 2 chrUextra 27659077 27659642 -1345014 + R1_DM LINE R1 2677 3241 -2115 1 796 1186 7 14 7 chrUextra 27659742 27659886 -1344770 + LSU-rRNA_Dme rRNA rRNA 1647 1791 -2109 1 796 3561 0 0 0 chrUextra 27659928 27660307 -1344349 + LSU-rRNA_Dme rRNA rRNA 1788 2166 -1734 1 796 5109 0 2 0 chrUextra 27661071 27661635 -1343021 - ROO_I LTR Pao -4540 3716 3152 1 796 2486 118 9 49 chrUextra 27661747 27662298 -1342358 + DMSAT6 Satellite Satellite 1 528 -3 1 796 1488 44 0 0 chrUextra 27662400 27662760 -1341896 + (ATAAG)n Simple_repeat Simple_repeat 1 360 0 1 796 1067 84 0 6 chrUextra 27662782 27662961 -1341695 + (ATAAG)n Simple_repeat Simple_repeat 1 178 0 1 796 2526 93 24 20 chrUextra 27663063 27663614 -1341042 + DMSAT6 Satellite Satellite 1 552 -85 1 796 1620 18 0 0 chrUextra 27663729 27664119 -1340537 + (TTCTC)n Simple_repeat Simple_repeat 1 390 0 1 796 330 19 98 36 chrUextra 27664130 27664242 -1340414 + GA-rich Low_complexity Low_complexity 2 120 0 1 796 5016 6 2 0 chrUextra 27664394 27664942 -1339714 + DOC LINE Jockey 2227 2775 -1950 1 796 1309 58 0 17 chrUextra 27665721 27665896 -1338760 + BATUMI_I LTR Pao 7792 7963 0 1 796 1818 46 8 29 chrUextra 27665918 27666164 -1338492 + BATUMI_LTR LTR Pao 32 272 0 1 796 821 17 0 34 chrUextra 27666164 27666283 -1338373 + (TTATA)n Simple_repeat Simple_repeat 5 119 0 1 796 3911 248 22 53 chrUextra 27666385 27667611 -1337045 - SAR_DM Satellite Satellite -219 1253 66 1 796 2927 169 5 2 chrUextra 27667714 27668272 -1336384 - SAR_DM Satellite Satellite -581 891 332 1 796 1560 141 0 0 chrUextra 27668407 27668655 -1336001 - IDEFIX_I LTR Gypsy -1593 4035 3788 1 796 1551 145 67 10 chrUextra 27668639 27668939 -1335717 - IDEFIX_I LTR Gypsy -2171 3457 3141 1 796 2570 87 16 27 chrUextra 27669039 27669600 -1335056 + DMSAT6 Satellite Satellite 1 554 -149 1 796 3517 27 2 11 chrUextra 27669703 27670148 -1334508 + IDEFIX_I LTR Gypsy 5188 5628 0 1 796 1031 8 0 0 chrUextra 27670148 27670267 -1334389 + IDEFIX_LTR LTR Gypsy 1 119 -475 1 796 4309 2 0 47 chrUextra 27670367 27670824 -1333832 - DM176_I LTR Gypsy -5447 973 527 1 796 208 28 26 53 chrUextra 27670824 27670862 -1333794 + (TTA)n Simple_repeat Simple_repeat 3 39 0 1 796 4309 2 0 47 chrUextra 27670862 27670931 -1333725 - DM176_I LTR Gypsy -5894 526 472 1 796 1271 40 17 11 chrUextra 27671031 27671210 -1333446 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 796 796 115 28 28 chrUextra 27671220 27671399 -1333257 + CT-rich Low_complexity Low_complexity 1 179 0 1 796 908 97 22 28 chrUextra 27671404 27671584 -1333072 + (TTCTC)n Simple_repeat Simple_repeat 1 179 0 1 796 1028 0 0 0 chrUextra 27671695 27671806 -1332850 - NTS_DM Other Other -129 111 1 1 796 1958 8 17 13 chrUextra 27671806 27672045 -1332611 - NTS_DM Other Other 0 240 1 1 796 1606 24 19 19 chrUextra 27672045 27672259 -1332397 - NTS_DM Other Other 0 240 27 1 796 4864 37 0 0 chrUextra 27672360 27672923 -1331733 - DIVER_I LTR Pao -3847 1796 1234 1 796 5256 2 0 0 chrUextra 27673687 27674251 -1330405 + LSU-rRNA_Dme rRNA rRNA 2751 3314 -586 1 796 5192 0 0 2 chrUextra 27674351 27674915 -1329741 + R1_DM LINE R1 1647 2209 -3147 1 796 2616 40 0 15 chrUextra 27675015 27675343 -1329313 + PROTOP DNA P 4158 4480 0 1 796 799 126 154 0 chrUextra 27675343 27675486 -1329170 - DNAREP1_DM LINE Penelope -20 574 410 1 796 514 100 0 0 chrUextra 27675480 27675550 -1329106 - DNAREP1_DM LINE Penelope -490 104 35 1 796 2715 169 12 11 chrUextra 27675679 27676237 -1328419 + SAR_DM Satellite Satellite 412 970 -502 1 796 3365 5 0 0 chrUextra 27676343 27676714 -1327942 - G6_DM LINE Jockey -1671 371 1 1 796 5269 0 0 2 chrUextra 27677007 27677571 -1327085 - SSU-rRNA_Dme rRNA rRNA -1149 846 284 1 796 2511 52 8 7 chrUextra 27677671 27678018 -1326638 + QUASIMODO_I LTR Gypsy 4981 5275 -785 1 796 551 0 124 12 chrUextra 27678027 27678188 -1326468 + (TA)n Simple_repeat Simple_repeat 2 180 0 1 796 42 0 0 0 chrUextra 27678193 27678235 -1326421 + AT_rich Low_complexity Low_complexity 1 42 0 1 796 2728 177 11 7 chrUextra 27678335 27678899 -1325757 + SAR_DM Satellite Satellite 256 821 -651 1 796 1233 18 18 18 chrUextra 27678999 27679167 -1325489 + NTS_DM Other Other 73 240 0 1 796 1388 6 0 18 chrUextra 27679167 27679332 -1325324 + NTS_DM Other Other 1 162 -78 1 796 532 119 36 0 chrUextra 27679442 27679526 -1325130 + NTS_DM Other Other 4 90 -150 1 796 2685 96 14 25 chrUextra 27679663 27680227 -1324429 + DMSAT6 Satellite Satellite 1 558 0 1 796 4817 27 9 3 chrUextra 27680327 27680891 -1323765 + DMCR1A LINE CR1 2808 3374 -1096 1 796 3290 3 0 0 chrUextra 27680991 27681347 -1323309 + LSU-rRNA_Dme rRNA rRNA 2229 2584 -1316 1 796 2010 0 0 0 chrUextra 27681340 27681554 -1323102 + R2_DM LINE R2 1043 1256 -2351 1 796 2671 85 26 20 chrUextra 27681674 27682217 -1322439 + DMSAT6 Satellite Satellite 1 545 0 1 796 4277 62 50 0 chrUextra 27682980 27683543 -1321113 + TART_B1 LINE telomeric 2864 3454 -7200 1 796 2698 171 9 14 chrUextra 27683643 27684206 -1320450 + SAR_DM Satellite Satellite 409 968 -504 1 796 29 70 0 0 chrUextra 27684306 27684363 -1320293 + AT_rich Low_complexity Low_complexity 1 57 0 1 796 22 0 0 0 chrUextra 27684474 27684496 -1320160 + AT_rich Low_complexity Low_complexity 1 22 0 1 796 2388 40 0 0 chrUextra 27684567 27684869 -1319787 - DOC LINE Jockey 0 4725 4424 1 796 1955 8 17 13 chrUextra 27684972 27685211 -1319445 - NTS_DM Other Other 0 240 1 1 796 1986 0 17 13 chrUextra 27685211 27685450 -1319206 - NTS_DM Other Other 0 240 1 1 796 576 0 49 37 chrUextra 27685450 27685532 -1319124 - NTS_DM Other Other 0 240 158 1 796 1620 0 0 0 chrUextra 27685651 27685831 -1318825 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 796 1620 0 0 0 chrUextra 27686295 27686524 -1318132 + (GAGAA)n Simple_repeat Simple_repeat 1 229 0 1 796 2600 84 16 43 chrUextra 27686958 27687520 -1317136 - DMSAT6 Satellite Satellite -90 546 1 1 796 3398 28 0 0 chrUextra 27687621 27688017 -1316639 + MDG1_LTR LTR Gypsy 47 442 0 1 796 1330 20 0 0 chrUextra 27688032 27688184 -1316472 + MDG1_LTR LTR Gypsy 230 381 -61 1 796 1464 34 0 0 chrUextra 27688285 27688463 -1316193 + (TTATA)n Simple_repeat Simple_repeat 3 180 0 1 796 609 14 0 0 chrUextra 27688463 27688533 -1316123 + (CATTA)n Simple_repeat Simple_repeat 1 70 0 1 796 2759 164 11 9 chrUextra 27688954 27689507 -1315149 - SAR_DM Satellite Satellite -593 879 326 1 796 1043 77 10 18 chrUextra 27689610 27690167 -1314489 - RSP Satellite Satellite -83 553 1 1 796 2514 103 13 24 chrUextra 27690273 27690825 -1313831 + DMSAT6 Satellite Satellite 1 545 -65 1 796 2712 0 7 0 chrUextra 27690936 27691230 -1313426 + SSU-rRNA_Dme rRNA rRNA 1700 1995 0 1 796 21 89 0 0 chrUextra 27691249 27691305 -1313351 + AT_rich Low_complexity Low_complexity 1 56 0 1 796 4962 2 2 2 chrUextra 27691599 27692162 -1312494 + ROO_I LTR Pao 1735 2297 -5959 1 796 2680 163 15 9 chrUextra 27692263 27692808 -1311848 - SAR_DM Satellite Satellite -555 917 370 1 796 5189 2 0 0 chrUextra 27694910 27695472 -1309184 - R1_DM LINE R1 -3354 2002 1441 1 796 711 0 0 0 chrUextra 27695572 27695651 -1309005 + (GAGAA)n Simple_repeat Simple_repeat 2 80 0 1 796 2413 108 23 21 chrUextra 27696235 27696796 -1307860 - DMSAT6 Satellite Satellite 0 561 1 1 796 4545 54 2 7 chrUextra 27696896 27697458 -1307198 - BATUMI_I LTR Pao -3981 3982 3424 1 796 4283 16 34 18 chrUextra 27697565 27698120 -1306536 - MDG1_I LTR Gypsy -5367 1229 666 1 796 420 20 0 0 chrUextra 27698220 27698269 -1306387 + (TTCTC)n Simple_repeat Simple_repeat 5 53 0 1 796 669 268 53 48 chrUextra 27699008 27699444 -1305212 - SAR_DM Satellite Satellite -570 902 465 1 796 3528 0 0 0 chrUextra 27699544 27699921 -1304735 + LSU-rRNA_Dme rRNA rRNA 3524 3900 0 1 796 266 196 0 19 chrUextra 27700022 27700074 -1304582 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 796 5143 7 0 2 chrUextra 27700206 27700768 -1303888 + SSU-rRNA_Dme rRNA rRNA 409 969 -1026 1 796 1620 3 0 0 chrUextra 27700868 27701215 -1303441 + (GAGAA)n Simple_repeat Simple_repeat 1 347 0 1 796 2553 94 27 11 chrUextra 27701530 27702059 -1302597 - DMSAT6 Satellite Satellite -79 537 1 1 796 2528 89 23 21 chrUextra 27702193 27702754 -1301902 - DMSAT6 Satellite Satellite 0 561 1 1 796 5098 2 0 4 chrUextra 27702854 27703416 -1301240 - R1_DM LINE R1 -1753 3603 3044 1 796 5184 0 4 2 chrUextra 27704178 27704740 -1299916 - SSU-rRNA_Dme rRNA rRNA -160 1835 1273 1 796 4936 6 0 0 chrUextra 27704840 27705370 -1299286 - R2_DM LINE R2 -2205 1402 873 1 796 379 43 0 0 chrUextra 27705355 27705401 -1299255 - R2B_DM LINE R2 -3441 87 42 1 796 1989 0 0 0 chrUextra 27706162 27706373 -1298283 + SSU-rRNA_Dme rRNA rRNA 1785 1995 0 1 796 21 89 0 0 chrUextra 27706392 27706448 -1298208 + AT_rich Low_complexity Low_complexity 1 56 0 1 796 560 169 15 7 chrUextra 27707559 27707696 -1296960 + PROTOP_B DNA P 311 448 -705 1 796 552 135 287 0 chrUextra 27707735 27707906 -1296750 - DNAREP1_DM LINE Penelope -199 395 176 1 796 26 0 0 0 chrUextra 27708008 27708034 -1296622 + AT_rich Low_complexity Low_complexity 1 26 0 1 796 3948 25 21 15 chrUextra 27708145 27708451 -1296205 - DM176_I LTR Gypsy -5581 839 528 1 796 181 30 29 57 chrUextra 27708451 27708486 -1296170 + (TTA)n Simple_repeat Simple_repeat 3 36 0 1 796 3948 25 21 15 chrUextra 27708486 27708700 -1295956 - DM176_I LTR Gypsy -5893 527 316 1 796 4335 37 32 0 chrUextra 27708806 27709367 -1295289 + R1_DM LINE R1 449 1072 -4284 1 796 1611 34 0 5 chrUextra 27709474 27709921 -1294735 + (TTCTC)n Simple_repeat Simple_repeat 1 444 0 1 796 366 42 0 0 chrUextra 27709922 27709970 -1294686 + (TCTCG)n Simple_repeat Simple_repeat 3 50 0 1 796 186 125 62 0 chrUextra 27709980 27710028 -1294628 + GA-rich Low_complexity Low_complexity 3 53 0 1 796 423 0 0 0 chrUextra 27710128 27710175 -1294481 + (TTCTC)n Simple_repeat Simple_repeat 3 49 0 1 796 5135 7 0 0 chrUextra 27710789 27711350 -1293306 + R1_DM LINE R1 2967 3527 -1829 1 796 2570 85 7 38 chrUextra 27711450 27711999 -1292657 + DMSAT6 Satellite Satellite 1 532 -159 1 796 900 0 0 0 chrUextra 27712111 27712211 -1292445 + (TCTTG)n Simple_repeat Simple_repeat 1 100 0 1 796 1620 9 0 2 chrUextra 27712211 27712672 -1291984 + (CACAA)n Simple_repeat Simple_repeat 1 460 0 1 796 2611 86 13 47 chrUextra 27712772 27713312 -1291344 - DMSAT6 Satellite Satellite -412 521 1 1 796 621 0 0 0 chrUextra 27713924 27713993 -1290663 + (TTCTC)n Simple_repeat Simple_repeat 2 70 0 1 796 4805 14 29 0 chrUextra 27714093 27714653 -1290003 + MDG3_I LTR Gypsy 2358 2933 -2053 1 796 1165 170 182 22 chrUextra 27714753 27715120 -1289536 - Gypsy12_LTR LTR Gypsy -754 1582 1157 1 796 685 185 88 82 chrUextra 27715119 27715313 -1289343 + Gypsy12_LTR LTR Gypsy 281 475 -1861 1 796 2682 84 25 11 chrUextra 27715413 27715933 -1288723 + DMSAT6 Satellite Satellite 1 527 -74 1 796 5107 7 0 0 chrUextra 27716073 27716633 -1288023 - FW_DM LINE Jockey -3611 1081 522 1 796 2839 72 25 2 chrUextra 27716733 27717293 -1287363 + DMSAT6 Satellite Satellite 1 572 -141 1 796 945 68 6 20 chrUextra 27717394 27717934 -1286722 + RSP Satellite Satellite 1 532 0 1 796 4903 25 0 0 chrUextra 27718053 27718612 -1286044 - R1_DM LINE R1 -2538 2818 2260 1 796 2530 88 20 29 chrUextra 27718714 27719273 -1285383 + DMSAT6 Satellite Satellite 1 554 -59 1 796 2576 83 11 41 chrUextra 27719373 27719929 -1284727 + DMSAT6 Satellite Satellite 1 539 -61 1 796 2457 97 40 13 chrUextra 27720039 27720592 -1284064 - DMSAT6 Satellite Satellite 0 567 1 1 796 2508 189 12 7 chrUextra 27720693 27721253 -1283403 + SAR_DM Satellite Satellite 230 792 -680 1 796 3590 251 24 28 chrUextra 27721353 27722567 -1282089 + SAR_DM Satellite Satellite 1 1209 -227 1 796 248 35 0 0 chrUextra 27722543 27722572 -1282084 - ARS406_DM Unknown Unknown -164 189 161 1 796 2481 96 21 13 chrUextra 27722672 27723231 -1281425 + DMSAT6 Satellite Satellite 1 563 -108 1 796 931 9 9 0 chrUextra 27723331 27723438 -1281218 - R1_DM LINE R1 -5248 108 1 1 796 4078 9 0 2 chrUextra 27723438 27723890 -1280766 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2182 1 796 2492 170 26 5 chrUextra 27723990 27724549 -1280107 + SAR_DM Satellite Satellite 1 570 -1037 1 796 360 40 40 0 chrUextra 27724649 27724699 -1279957 + ARS406_DM Unknown Unknown 138 189 -164 1 796 2566 180 17 4 chrUextra 27724657 27725187 -1279469 - SAR_DM Satellite Satellite -615 857 321 1 796 5053 0 0 4 chrUextra 27725967 27726526 -1278130 - ROO_I LTR Pao -2691 5565 5009 1 796 1620 4 0 9 chrUextra 27726626 27727172 -1277484 + (TAGA)n Simple_repeat Simple_repeat 1 540 0 1 796 387 0 0 0 chrUextra 27727285 27727328 -1277328 + (CTAG)n Simple_repeat Simple_repeat 1 43 0 1 796 1571 0 19 0 chrUextra 27727328 27727544 -1277112 + (CTATG)n Simple_repeat Simple_repeat 1 219 0 1 796 1620 0 0 0 chrUextra 27727544 27727724 -1276932 + (CTAG)n Simple_repeat Simple_repeat 1 180 0 1 796 842 0 0 10 chrUextra 27727745 27727844 -1276812 + (CTAG)n Simple_repeat Simple_repeat 1 98 0 1 796 1620 43 0 8 chrUextra 27727951 27728446 -1276210 + (TTTA)n Simple_repeat Simple_repeat 1 491 0 1 796 315 0 0 0 chrUextra 27728448 27728483 -1276173 + (TATG)n Simple_repeat Simple_repeat 2 36 0 1 796 2595 186 5 11 chrUextra 27728603 27729162 -1275494 + SAR_DM Satellite Satellite 516 1071 -401 1 796 2699 83 32 27 chrUextra 27729262 27729821 -1274835 - DMSAT6 Satellite Satellite 0 562 1 1 796 5152 2 2 2 chrUextra 27729921 27730480 -1274176 - SSU-rRNA_Dme rRNA rRNA -708 1287 729 1 796 4950 14 0 5 chrUextra 27730581 27731137 -1273519 + DOC2_DM LINE Jockey 3566 4118 -675 1 796 4642 16 0 5 chrUextra 27731241 27731798 -1272858 + CIRCE LINE Composite 4224 4777 -1579 1 796 4041 29 107 0 chrUextra 27731898 27732457 -1272199 + R1_DM LINE R1 4382 5000 -356 1 796 2676 92 6 25 chrUextra 27732557 27733085 -1271571 + DMSAT6 Satellite Satellite 1 517 -82 1 796 2504 91 0 85 chrUextra 27733246 27733752 -1270904 - DMSAT6 Satellite Satellite -3 467 5 1 796 1158 123 0 0 chrUextra 27734533 27735008 -1269648 + (TA)n Simple_repeat Simple_repeat 1 475 0 1 796 735 0 0 0 chrUextra 27735010 27735091 -1269565 - DM176_LTR LTR Gypsy 0 507 427 1 796 3231 11 0 0 chrUextra 27735373 27735749 -1268907 + DM176_I LTR Gypsy 5440 5815 -605 1 796 198 0 0 169 chrUextra 27735850 27736057 -1268599 + (TCTTG)n Simple_repeat Simple_repeat 2 173 0 1 796 789 113 0 51 chrUextra 27736062 27736220 -1268436 + T-rich Low_complexity Low_complexity 6 155 0 1 796 1163 167 0 6 chrUextra 27736226 27736407 -1268249 + (TCTCTG)n Simple_repeat Simple_repeat 1 180 0 1 796 323 123 0 198 chrUextra 27736507 27736598 -1268058 + Stalker3_LTR LTR Gypsy 300 372 0 1 796 4109 28 0 0 chrUextra 27736598 27737065 -1267591 - R1_DM LINE R1 -963 4393 3927 1 796 2683 159 13 8 chrUextra 27737165 27737697 -1266959 + SAR_DM Satellite Satellite 389 923 -549 1 796 882 74 104 0 chrUextra 27737588 27737723 -1266933 - ARS406_DM Unknown Unknown -164 189 41 1 796 5009 9 0 0 chrUextra 27737823 27738381 -1266275 + DOC2_DM LINE Jockey 2780 3337 -1456 1 796 4901 21 4 2 chrUextra 27738481 27739039 -1265617 + MAX_I LTR Pao 3332 3890 -4024 1 796 5178 2 2 0 chrUextra 27739139 27739697 -1264959 - LSU-rRNA_Dme rRNA rRNA -1285 2615 2057 1 796 3929 9 0 0 chrUextra 27740455 27740884 -1263772 + R1_DM LINE R1 4928 5356 0 1 796 1208 8 0 0 chrUextra 27740882 27741013 -1263643 + LSU-rRNA_Dme rRNA rRNA 2640 2770 -1130 1 796 873 0 0 0 chrUextra 27741113 27741210 -1263446 + (TTGTG)n Simple_repeat Simple_repeat 4 100 0 1 796 2362 150 20 41 chrUextra 27741771 27742329 -1262327 + HETA LINE telomeric 22 567 -5514 1 796 1228 0 0 7 chrUextra 27742446 27742582 -1262074 + 5S_DM RNA RNA 1 135 0 1 796 1258 0 0 0 chrUextra 27742813 27742948 -1261708 + 5S_DM RNA RNA 1 135 0 1 796 2483 97 13 56 chrUextra 27743753 27744303 -1260353 + DMSAT6 Satellite Satellite 1 526 0 1 796 2563 179 11 9 chrUextra 27744406 27744959 -1259697 - SAR_DM Satellite Satellite -396 1076 523 1 796 252 172 0 0 chrUextra 27745720 27745778 -1258878 + (CTATT)n Simple_repeat Simple_repeat 2 59 0 1 796 4874 12 0 0 chrUextra 27746377 27746935 -1257721 + DMRT1A LINE R1 494 1051 -4132 1 796 5055 4 2 4 chrUextra 27747035 27747593 -1257063 - LSU-rRNA_Dme rRNA rRNA -2287 1613 1057 1 796 1332 18 0 6 chrUextra 27747718 27747883 -1256773 + NTS_DM Other Other 38 201 -39 1 796 928 9 0 27 chrUextra 27747935 27748047 -1256609 + NTS_DM Other Other 25 133 -107 1 796 1302 18 0 12 chrUextra 27748047 27748213 -1256443 + NTS_DM Other Other 38 201 -39 1 796 21 57 0 0 chrUextra 27748213 27748248 -1256408 + AT_rich Low_complexity Low_complexity 1 35 0 1 796 2809 165 7 7 chrUextra 27748355 27748905 -1255751 + SAR_DM Satellite Satellite 346 895 -577 1 796 5067 7 0 4 chrUextra 27749008 27749565 -1255091 - SSU-rRNA_Dme rRNA rRNA -339 1656 1102 1 796 2677 32 0 3 chrUextra 27749665 27749976 -1254680 + G2_DM LINE Jockey 1148 1457 -1645 1 796 2047 40 0 0 chrUextra 27749974 27750222 -1254434 - G2_DM LINE Jockey -75 3027 2780 1 796 1185 50 0 17 chrUextra 27750322 27750503 -1254153 + (TCTA)n Simple_repeat Simple_repeat 2 179 0 1 796 1242 69 0 3 chrUextra 27750528 27750877 -1253779 + (TCTA)n Simple_repeat Simple_repeat 1 347 0 1 796 401 56 19 0 chrUextra 27751051 27751105 -1253551 - DNAREP1_DM LINE Penelope -532 62 8 1 796 599 149 15 7 chrUextra 27751177 27751312 -1253344 + PROTOP_B DNA P 313 448 -705 1 796 350 87 0 0 chrUextra 27751351 27751397 -1253259 - DNAREP1_DM LINE Penelope -199 395 350 1 796 1620 42 0 13 chrUextra 27751647 27752174 -1252482 + (TAA)n Simple_repeat Simple_repeat 1 519 0 1 796 3867 13 2 54 chrUextra 27752293 27752775 -1251881 - LSU-rRNA_Dme rRNA rRNA -3443 457 1 1 796 254 300 15 15 chrUextra 27753017 27753149 -1251507 + (TATATG)n Simple_repeat Simple_repeat 2 133 0 1 796 22 0 0 0 chrUextra 27753175 27753197 -1251459 + AT_rich Low_complexity Low_complexity 1 22 0 1 796 416 266 22 102 chrUextra 27753276 27753502 -1251154 - TIRANT_I LTR Gypsy -6337 1355 1148 1 796 28 86 0 0 chrUextra 27753607 27753677 -1250979 + AT_rich Low_complexity Low_complexity 1 70 0 1 796 351 89 20 51 chrUextra 27753679 27753781 -1250875 + MDG1_I LTR Gypsy 6545 6596 0 1 796 1533 20 0 0 chrUextra 27753785 27754131 -1250525 + (TAA)n Simple_repeat Simple_repeat 1 346 0 1 796 2700 169 13 13 chrUextra 27754264 27754821 -1249835 - SAR_DM Satellite Satellite -454 1018 462 1 796 5174 2 0 0 chrUextra 27754921 27755478 -1249178 + R1_DM LINE R1 1946 2502 -2854 1 796 2654 79 12 45 chrUextra 27755578 27756135 -1248521 + DMSAT6 Satellite Satellite 1 538 -40 1 796 4827 6 2 0 chrUextra 27756268 27756792 -1247864 - LSU-rRNA_Dme rRNA rRNA -2 3898 3374 1 796 353 333 0 16 chrUextra 27756892 27757075 -1247581 + (CATA)n Simple_repeat Simple_repeat 1 180 0 1 796 458 261 0 24 chrUextra 27757019 27757365 -1247291 + (CAAA)n Simple_repeat Simple_repeat 1 337 0 1 796 2471 181 16 14 chrUextra 27757549 27758105 -1246551 + SAR_DM Satellite Satellite 446 1002 -470 1 796 5164 4 0 0 chrUextra 27758861 27759417 -1245239 - LSU-rRNA_Dme rRNA rRNA -684 3216 2661 1 796 945 0 0 0 chrUextra 27759517 27759622 -1245034 + (GAGAA)n Simple_repeat Simple_repeat 4 108 0 1 796 34 24 0 0 chrUextra 27760249 27760290 -1244366 + AT_rich Low_complexity Low_complexity 1 41 0 1 796 598 220 364 26 chrUextra 27760299 27760645 -1244011 - TAHRE LINE telomeric -187 10276 9814 1 796 530 165 11 0 chrUextra 27760638 27760729 -1243927 - TART LINE telomeric -4520 9957 9866 1 796 4976 2 0 2 chrUextra 27760829 27761368 -1243288 + R1_DM LINE R1 4819 5356 0 1 796 4587 22 5 2 chrUextra 27761485 27762041 -1242615 - TRANSPAC_I LTR Gypsy -324 4266 3709 1 796 202 265 0 0 chrUextra 27762159 27762208 -1242448 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 796 1856 40 4 101 chrUextra 27762797 27763073 -1241583 - MAX_I LTR Pao -7665 249 1 1 796 1609 131 77 0 chrUextra 27763073 27763347 -1241309 - MAX_LTR LTR Pao 0 321 27 1 796 232 0 0 0 chrUextra 27763453 27763478 -1241178 - NTS_DM Other Other -178 62 38 1 796 928 9 0 27 chrUextra 27763478 27763590 -1241066 - NTS_DM Other Other -107 133 25 1 796 1332 18 0 6 chrUextra 27763642 27763807 -1240849 - NTS_DM Other Other -39 201 38 1 796 928 9 0 27 chrUextra 27763807 27763919 -1240737 - NTS_DM Other Other -107 133 25 1 796 319 0 0 0 chrUextra 27763971 27764008 -1240648 - NTS_DM Other Other -39 201 165 1 796 1124 269 41 47 chrUextra 27764109 27764640 -1240016 - SAR_DM Satellite Satellite -751 721 194 1 796 332 267 54 20 chrUextra 27764507 27764656 -1240000 + XDMR_DM Unknown Unknown 6 159 -201 1 796 2653 161 24 22 chrUextra 27765422 27765974 -1238682 - SAR_DM Satellite Satellite -587 885 333 1 796 4994 2 5 4 chrUextra 27766077 27766633 -1238023 - LSU-rRNA_Dme rRNA rRNA -2216 1684 1128 1 796 4285 56 0 25 chrUextra 27766735 27767289 -1237367 + R1_DM LINE R1 118 657 -4699 1 796 2620 91 19 40 chrUextra 27767389 27767921 -1236735 + DMSAT6 Satellite Satellite 1 520 -147 1 796 2459 179 15 8 chrUextra 27768051 27768584 -1236072 + SAR_DM Satellite Satellite 540 1076 -396 1 796 3380 3 5 3 chrUextra 27770013 27770391 -1234265 + LSU-rRNA_Dme rRNA rRNA 1413 1791 -2109 1 796 1247 0 0 7 chrUextra 27770432 27770569 -1234087 + LSU-rRNA_Dme rRNA rRNA 1788 1923 -1977 1 796 5055 4 2 4 chrUextra 27770669 27771225 -1233431 + LSU-rRNA_Dme rRNA rRNA 1002 1556 -2344 1 796 5032 2 2 5 chrUextra 27771325 27771881 -1232775 + LSU-rRNA_Dme rRNA rRNA 870 1423 -2477 1 796 2601 174 13 16 chrUextra 27772637 27773192 -1231464 + SAR_DM Satellite Satellite 299 851 -621 1 796 2548 174 13 14 chrUextra 27773292 27773847 -1230809 - SAR_DM Satellite Satellite -518 954 401 1 796 2694 81 11 54 chrUextra 27773981 27774502 -1230154 + DMSAT6 Satellite Satellite 1 499 0 1 796 26 30 0 0 chrUextra 27775070 27775103 -1229553 + AT_rich Low_complexity Low_complexity 1 33 0 1 796 2746 170 18 23 chrUextra 27775912 27777122 -1227534 - DMSAT6 Satellite Satellite -68 1203 1 1 796 2477 172 37 11 chrUextra 27777877 27778423 -1226233 - SAR_DM Satellite Satellite -587 885 326 1 796 1309 50 0 0 chrUextra 27778532 27778691 -1225965 + DM1731_LTR LTR Copia 178 336 0 1 796 1620 8 5 0 chrUextra 27778691 27779087 -1225569 + (TTATA)n Simple_repeat Simple_repeat 1 398 0 1 796 2576 104 11 7 chrUextra 27779187 27779742 -1224914 + DMSAT6 Satellite Satellite 1 556 -97 1 796 5077 4 0 0 chrUextra 27779842 27780397 -1224259 - R1_DM LINE R1 -2098 3258 2704 1 796 2750 169 7 7 chrUextra 27780497 27781050 -1223606 - SAR_DM Satellite Satellite -627 845 293 1 796 1991 91 66 29 chrUextra 27781152 27781674 -1222982 - TAHRE LINE telomeric -12 10451 10186 1 796 2559 91 22 7 chrUextra 27781807 27782352 -1222304 - DMSAT6 Satellite Satellite -73 552 1 1 796 853 11 0 0 chrUextra 27782462 27782555 -1222101 - FW_DM LINE Jockey -1992 2700 2608 1 796 4038 13 0 13 chrUextra 27782551 27783017 -1221639 - FW_DM LINE Jockey -2206 2486 2027 1 796 429 49 0 16 chrUextra 27783117 27783179 -1221477 + NTS_DM Other Other 141 201 -39 1 796 928 9 0 27 chrUextra 27783231 27783343 -1221313 + NTS_DM Other Other 25 133 -107 1 796 1340 18 0 6 chrUextra 27783343 27783508 -1221148 + NTS_DM Other Other 38 201 -39 1 796 901 18 0 27 chrUextra 27783560 27783672 -1220984 + NTS_DM Other Other 25 133 -107 1 796 2492 186 25 33 chrUextra 27783772 27784959 -1219697 + DMSAT6 Satellite Satellite 1 1177 0 1 796 2356 109 20 38 chrUextra 27785082 27785637 -1219019 - DMSAT6 Satellite Satellite -107 544 1 1 796 2239 180 47 7 chrUextra 27785737 27786292 -1218364 + SAR_DM Satellite Satellite 1 577 -677 1 99 3971 66 45 18 chrUextra 27787047 27787602 -1217054 + R1_DM LINE R1 292 861 -4495 1 797 5094 2 0 0 chrUextra 27789012 27789566 -1215090 + R1_DM LINE R1 1416 1969 -3387 1 797 2404 77 26 41 chrUextra 27789684 27790220 -1214436 - DMSAT6 Satellite Satellite -1 527 1 1 797 460 0 0 140 chrUextra 27790321 27790714 -1213942 + (CAGAGA)n Simple_repeat Simple_repeat 1 337 0 1 797 442 141 54 8 chrUextra 27790744 27790873 -1213783 + GA-rich Low_complexity Low_complexity 5 139 0 1 797 2639 169 11 8 chrUextra 27790993 27791528 -1213128 - SAR_DM Satellite Satellite -396 1076 540 1 797 2694 268 11 50 chrUextra 27791631 27792806 -1211850 + SAR_DM Satellite Satellite 1 1128 -680 1 797 323 223 9 26 chrUextra 27792720 27792835 -1211821 - XDMR_DM Unknown Unknown 0 360 248 1 797 5092 2 2 2 chrUextra 27792936 27793490 -1211166 - LSU-rRNA_Dme rRNA rRNA -883 3017 2464 1 797 2362 95 5 52 chrUextra 27793590 27794144 -1210512 - DMSAT6 Satellite Satellite -6 528 1 1 797 2464 93 16 49 chrUextra 27794244 27794798 -1209858 - DMSAT6 Satellite Satellite -32 535 1 1 797 2332 110 146 7 chrUextra 27794982 27795394 -1209262 + Invader1_I LTR Gypsy 2718 3186 0 1 797 225 70 0 189 chrUextra 27795399 27795452 -1209204 + Invader1_LTR LTR Gypsy 4 46 -377 1 797 2562 90 9 70 chrUextra 27795552 27796105 -1208551 + DMSAT6 Satellite Satellite 1 519 -3 1 797 258 194 0 0 chrUextra 27796688 27796755 -1207901 + (TTATG)n Simple_repeat Simple_repeat 2 68 0 1 797 2594 96 21 32 chrUextra 27796876 27797414 -1207242 - DMSAT6 Satellite Satellite -3 532 1 1 797 4534 26 0 11 chrUextra 27797514 27798068 -1206588 - NOMAD_I LTR Gypsy -448 6124 5577 1 797 5136 4 0 0 chrUextra 27798168 27798722 -1205934 - LSU-rRNA_Dme rRNA rRNA -1530 2370 1817 1 797 1249 42 0 18 chrUextra 27798824 27798992 -1205664 - NTS_DM Other Other -75 165 1 1 797 1714 34 16 33 chrUextra 27798992 27799236 -1205420 - NTS_DM Other Other 0 240 1 1 797 987 22 29 21 chrUextra 27799236 27799376 -1205280 - NTS_DM Other Other 0 240 100 1 797 2588 180 9 11 chrUextra 27799476 27800026 -1204630 + SAR_DM Satellite Satellite 498 1046 -426 1 797 2586 91 18 22 chrUextra 27800130 27800683 -1203973 + DMSAT6 Satellite Satellite 1 551 0 1 797 357 41 0 20 chrUextra 27801438 27801488 -1203168 - ARS406_DM Unknown Unknown -215 138 90 1 797 1896 179 24 12 chrUextra 27801485 27801908 -1202748 + SAR_DM Satellite Satellite 487 914 -558 1 797 633 70 0 0 chrUextra 27801905 27801991 -1202665 - ARS406_DM Unknown Unknown -195 158 73 1 797 5114 2 2 0 chrUextra 27802746 27803299 -1201357 - LSU-rRNA_Dme rRNA rRNA -1267 2633 2080 1 797 3572 12 45 0 chrUextra 27803399 27803821 -1200835 - IDEFIX_LTR LTR Gypsy -153 441 1 1 797 257 105 0 0 chrUextra 27803789 27803827 -1200829 + BARI1 DNA Tc1 3 40 -1710 1 797 2783 157 15 7 chrUextra 27804058 27804602 -1200054 + SAR_DM Satellite Satellite 332 879 -593 1 797 4654 24 2 2 chrUextra 27804705 27805258 -1199398 + PROTOP_A DNA P 504 1056 -49 1 797 248 130 58 0 chrUextra 27805366 27805435 -1199221 + CT-rich Low_complexity Low_complexity 2 74 0 1 797 1357 41 0 11 chrUextra 27806014 27806488 -1198168 + (TTATA)n Simple_repeat Simple_repeat 1 468 0 1 797 672 13 0 0 chrUextra 27806488 27806564 -1198092 + (TTCTC)n Simple_repeat Simple_repeat 1 77 0 1 797 21 89 0 0 chrUextra 27807079 27807135 -1197521 + AT_rich Low_complexity Low_complexity 1 56 0 1 797 576 0 0 0 chrUextra 27807154 27807217 -1197439 - SSU-rRNA_Dme rRNA rRNA 0 1995 1933 1 797 30 103 0 0 chrUextra 27807318 27807425 -1197231 + AT_rich Low_complexity Low_complexity 1 107 0 1 797 1620 33 0 2 chrUextra 27807970 27808519 -1196137 + (TTATA)n Simple_repeat Simple_repeat 1 548 0 1 797 757 0 0 0 chrUextra 27808623 27808709 -1195947 + ROO_LTR LTR Pao 343 428 0 1 797 1620 11 0 0 chrUextra 27809292 27809829 -1194827 + (GAGAA)n Simple_repeat Simple_repeat 1 537 0 1 797 227 195 0 0 chrUextra 27809951 27809992 -1194664 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2580 1 797 4183 25 2 2 chrUextra 27810004 27810482 -1194174 - LSU-rRNA_Dme rRNA rRNA 0 3900 3423 1 797 684 0 0 0 chrUextra 27810582 27810658 -1193998 + (CAAGA)n Simple_repeat Simple_repeat 1 76 0 1 797 34 24 0 0 chrUextra 27811636 27811677 -1192979 + AT_rich Low_complexity Low_complexity 1 41 0 1 797 5069 7 0 0 chrUextra 27811888 27812441 -1192215 - LSU-rRNA_Dme rRNA rRNA -615 3285 2733 1 797 1016 86 6 0 chrUextra 27812541 27812703 -1191953 + (AATAG)n Simple_repeat Simple_repeat 2 164 0 1 797 1188 98 3 27 chrUextra 27812731 27813094 -1191562 + (AATAG)n Simple_repeat Simple_repeat 1 354 0 1 797 5109 0 0 4 chrUextra 27813194 27813746 -1190910 - LSU-rRNA_Dme rRNA rRNA -488 3412 2863 1 797 2186 209 15 7 chrUextra 27813851 27814400 -1190256 - SAR_DM Satellite Satellite -677 795 243 1 797 2431 123 21 6 chrUextra 27814500 27815037 -1189619 + DMSAT6 Satellite Satellite 1 545 -78 1 797 4926 4 11 2 chrUextra 27815806 27816358 -1188298 - IVK_DM LINE I -2282 3120 2564 1 797 282 0 30 0 chrUextra 27816458 27816491 -1188165 - NTS_DM Other Other -169 71 38 1 797 890 9 9 27 chrUextra 27816491 27816602 -1188054 - NTS_DM Other Other -107 133 25 1 797 21 57 0 0 chrUextra 27816628 27816663 -1187993 + AT_rich Low_complexity Low_complexity 1 35 0 1 797 1306 24 0 6 chrUextra 27816663 27816828 -1187828 - NTS_DM Other Other -39 201 38 1 797 928 9 0 27 chrUextra 27816828 27816940 -1187716 - NTS_DM Other Other -107 133 25 1 797 21 36 0 0 chrUextra 27816966 27816994 -1187662 + AT_rich Low_complexity Low_complexity 1 28 0 1 797 213 236 59 26 chrUextra 27817125 27817277 -1187379 + (TTTAG)n Simple_repeat Simple_repeat 3 159 0 1 797 219 259 33 26 chrUextra 27817485 27817636 -1187020 + (TTTAG)n Simple_repeat Simple_repeat 3 154 0 1 797 4946 20 0 0 chrUextra 27817762 27818314 -1186342 + R1_DM LINE R1 4291 4842 -514 1 797 2049 184 11 18 chrUextra 27818418 27818963 -1185693 - SAR_DM Satellite Satellite -852 541 1 1 797 1488 65 0 10 chrUextra 27819067 27819584 -1185072 + (CAAGA)n Simple_repeat Simple_repeat 1 512 0 1 797 2662 167 11 6 chrUextra 27819721 27820250 -1184406 - SAR_DM Satellite Satellite -615 857 326 1 797 2289 199 8 6 chrUextra 27820370 27820885 -1183771 - SAR_DM Satellite Satellite -711 761 246 1 797 392 151 0 0 chrUextra 27820846 27820919 -1183737 + ARS406_DM Unknown Unknown 2 74 -279 1 797 1159 20 119 20 chrUextra 27823379 27823530 -1181126 + PROTOP_B DNA P 1 166 -987 1 797 2252 128 7 77 chrUextra 27823637 27824182 -1180474 - DMSAT6 Satellite Satellite -3 507 1 1 797 2417 89 11 54 chrUextra 27824282 27824834 -1179822 + DMSAT6 Satellite Satellite 1 527 0 1 797 2780 91 9 17 chrUextra 27824951 27825479 -1179177 + DMSAT6 Satellite Satellite 1 523 0 1 797 459 0 0 0 chrUextra 27825586 27825637 -1179019 + (TTCTC)n Simple_repeat Simple_repeat 1 51 0 1 797 1620 12 0 0 chrUextra 27825640 27826135 -1178521 + (GAGAA)n Simple_repeat Simple_repeat 1 495 0 1 797 1431 0 0 0 chrUextra 27826238 27826397 -1178259 + (GAGAA)n Simple_repeat Simple_repeat 4 162 0 1 797 4433 4 6 8 chrUextra 27827542 27828050 -1176606 + LSU-rRNA_Dme rRNA rRNA 1285 1791 -2109 1 797 2859 157 17 4 chrUextra 27828194 27828737 -1175919 + SAR_DM Satellite Satellite 342 891 -581 1 797 723 12 0 0 chrUextra 27828663 27828746 -1175910 - ARS406_DM Unknown Unknown -166 187 105 1 797 2201 164 17 15 chrUextra 27828846 27829273 -1175383 - SAR_DM Satellite Satellite -662 552 48 1 797 673 35 0 23 chrUextra 27829273 27829360 -1175296 + ARS406_DM Unknown Unknown 105 189 -164 1 797 2201 164 17 15 chrUextra 27829360 27829398 -1175258 - SAR_DM Satellite Satellite -662 47 1 1 797 1462 6 0 27 chrUextra 27829501 27829686 -1174970 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 1 797 1533 36 0 0 chrUextra 27829698 27829979 -1174677 + (TAGA)n Simple_repeat Simple_repeat 1 281 0 1 797 249 57 0 0 chrUextra 27830004 27830039 -1174617 + (CATA)n Simple_repeat Simple_repeat 1 35 0 1 797 946 43 0 8 chrUextra 27830151 27830268 -1174388 - R1_DM LINE R1 -2970 2386 2271 1 797 441 20 0 0 chrUextra 27830261 27830311 -1174345 + CIRCE LINE Composite 4931 4980 -1376 1 797 239 27 0 51 chrUextra 27830663 27830702 -1173954 + CIRCE LINE Composite 4981 5017 -1339 1 797 480 18 0 50 chrUextra 27830802 27830862 -1173794 - NTS_DM Other Other -159 81 25 1 797 21 57 0 0 chrUextra 27830888 27830923 -1173733 + AT_rich Low_complexity Low_complexity 1 35 0 1 797 1332 18 0 6 chrUextra 27830923 27831088 -1173568 - NTS_DM Other Other -39 201 38 1 797 928 9 0 27 chrUextra 27831088 27831200 -1173456 - NTS_DM Other Other -107 133 25 1 797 691 30 0 10 chrUextra 27831253 27831354 -1173302 - NTS_DM Other Other -39 201 102 1 797 4904 2 0 0 chrUextra 27831454 27832005 -1172651 - LSU-rRNA_Dme rRNA rRNA -2978 922 372 1 797 5031 2 2 4 chrUextra 27832105 27832656 -1172000 - SSU-rRNA_Dme rRNA rRNA -674 1321 772 1 797 5039 4 0 2 chrUextra 27833407 27833958 -1170698 + R1_DM LINE R1 1888 2437 -2919 1 797 452 218 157 28 chrUextra 27834058 27834275 -1170381 - Gypsy12A_LTR LTR Gypsy -1036 1244 1000 1 797 2848 0 0 0 chrUextra 27834709 27835029 -1169627 - HMSBEAGLE_I LTR Gypsy -5234 1295 976 1 797 764 38 45 15 chrUextra 27835029 27835163 -1169493 + (TAA)n Simple_repeat Simple_repeat 3 140 0 1 797 526 33 0 72 chrUextra 27835163 27835260 -1169396 - HMSBEAGLE_I LTR Gypsy -5733 796 707 1 797 5086 0 0 4 chrUextra 27835360 27835911 -1168745 - LSU-rRNA_Dme rRNA rRNA -526 3374 2826 1 797 3793 82 58 4 chrUextra 27836011 27836562 -1168094 - TRANSIB2 DNA Transib -1777 1067 487 1 797 4966 2 0 2 chrUextra 27836662 27837213 -1167443 - LSU-rRNA_Dme rRNA rRNA -2808 1092 543 1 797 1620 0 0 0 chrUextra 27837647 27837859 -1166797 + (CACAA)n Simple_repeat Simple_repeat 1 212 0 1 797 2684 84 7 24 chrUextra 27837964 27838515 -1166141 - DMSAT6 Satellite Satellite -106 541 1 1 797 1214 23 23 23 chrUextra 27838615 27838790 -1165866 + NTS_DM Other Other 66 240 0 1 797 1880 17 17 17 chrUextra 27838790 27839030 -1165626 + NTS_DM Other Other 1 240 0 1 797 1226 7 0 0 chrUextra 27839030 27839166 -1165490 + NTS_DM Other Other 1 136 -104 1 797 293 111 0 0 chrUextra 27839275 27839320 -1165336 + TART LINE telomeric 3318 3362 -11115 1 797 2206 126 17 26 chrUextra 27839315 27839665 -1164991 + TART LINE telomeric 3683 4029 -10448 1 797 949 136 0 7 chrUextra 27839669 27839817 -1164839 + TART LINE telomeric 6842 6988 -7489 1 797 2709 81 25 8 chrUextra 27839918 27840441 -1164215 - DMSAT6 Satellite Satellite -84 532 1 1 797 2568 111 21 9 chrUextra 27841240 27841770 -1162886 + DMSAT6 Satellite Satellite 1 536 -3 1 797 4517 35 18 4 chrUextra 27841870 27842421 -1162235 - R1_DM LINE R1 -4172 1184 626 1 797 2320 190 16 24 chrUextra 27842521 27843071 -1161585 + SAR_DM Satellite Satellite 555 1100 -372 1 797 489 47 0 0 chrUextra 27843171 27843235 -1161421 + (TTCTC)n Simple_repeat Simple_repeat 3 66 0 1 797 909 27 0 0 chrUextra 27843235 27843347 -1161309 + (GAGAA)n Simple_repeat Simple_repeat 2 113 0 1 797 4931 2 2 7 chrUextra 27843821 27844371 -1160285 + LSU-rRNA_Dme rRNA rRNA 1046 1592 -2308 1 797 2939 37 11 120 chrUextra 27844471 27845021 -1159635 + BATUMI_I LTR Pao 545 1034 -6929 1 797 2696 87 18 16 chrUextra 27845771 27846321 -1158335 - DMSAT6 Satellite Satellite 0 550 1 1 797 2827 159 11 7 chrUextra 27846426 27846971 -1157685 + SAR_DM Satellite Satellite 371 917 -555 1 797 2498 92 24 29 chrUextra 27847071 27847621 -1157035 - DMSAT6 Satellite Satellite 0 547 1 1 797 5085 0 2 2 chrUextra 27847721 27848271 -1156385 + SSU-rRNA_Dme rRNA rRNA 1198 1747 -248 1 797 2533 182 11 11 chrUextra 27848371 27848921 -1155735 + SAR_DM Satellite Satellite 498 1047 -425 1 797 2584 94 20 13 chrUextra 27849021 27849570 -1155086 - DMSAT6 Satellite Satellite -3 553 1 1 797 2529 112 7 25 chrUextra 27849673 27850221 -1154435 - DMSAT6 Satellite Satellite -5 538 1 1 797 1620 3 0 0 chrUextra 27850584 27850871 -1153785 + (TTCTC)n Simple_repeat Simple_repeat 1 287 0 1 797 2281 49 169 5 chrUextra 27850971 27851515 -1153141 - R1_DM LINE R1 -4110 1246 614 1 797 4046 86 6 2 chrUextra 27851620 27852169 -1152487 + S_DM DNA Tc1 688 1238 -498 1 797 1041 97 0 6 chrUextra 27852276 27852814 -1151842 + (CAAGA)n Simple_repeat Simple_repeat 1 534 0 1 797 2558 186 7 7 chrUextra 27853568 27854114 -1150542 + SAR_DM Satellite Satellite 469 1014 -458 1 797 236 247 60 36 chrUextra 27854232 27854316 -1150340 + OSVALDO_LTR LTR Gypsy 12 97 -1099 1 797 510 221 0 17 chrUextra 27854317 27854492 -1150164 + (TATG)n Simple_repeat Simple_repeat 3 174 0 1 797 717 217 0 0 chrUextra 27854556 27854736 -1149920 + (TA)n Simple_repeat Simple_repeat 1 180 0 1 797 5107 0 2 2 chrUextra 27854865 27855414 -1149242 + LSU-rRNA_Dme rRNA rRNA 2988 3536 -364 1 797 2635 96 26 22 chrUextra 27855527 27856063 -1148593 - DMSAT6 Satellite Satellite 0 537 1 1 797 5085 0 4 0 chrUextra 27856163 27856710 -1147946 + SSU-rRNA_Dme rRNA rRNA 1447 1995 0 1 797 957 0 0 0 chrUextra 27856812 27856915 -1147741 - NTS_DM Other Other -137 103 1 1 797 1933 13 17 13 chrUextra 27856915 27857154 -1147502 - NTS_DM Other Other 0 240 1 1 797 1388 64 19 14 chrUextra 27857154 27857361 -1147295 - NTS_DM Other Other 0 240 33 1 797 2652 82 6 83 chrUextra 27857488 27857993 -1146663 + DMSAT6 Satellite Satellite 5 470 0 1 797 2738 91 19 15 chrUextra 27858128 27858659 -1145997 + DMSAT6 Satellite Satellite 1 532 0 1 797 1515 43 0 4 chrUextra 27858761 27859297 -1145359 + (ATAAG)n Simple_repeat Simple_repeat 1 534 0 1 797 5079 4 0 0 chrUextra 27859408 27859957 -1144699 + LSU-rRNA_Dme rRNA rRNA 1980 2528 -1372 1 797 444 19 0 0 chrUextra 27860553 27860606 -1144050 + (GAGAA)n Simple_repeat Simple_repeat 5 57 0 1 797 504 0 0 0 chrUextra 27860710 27860766 -1143890 + (TTCTC)n Simple_repeat Simple_repeat 5 60 0 1 797 2693 73 17 36 chrUextra 27861377 27861904 -1142752 - DMSAT6 Satellite Satellite 0 517 1 1 797 385 36 0 141 chrUextra 27862013 27862433 -1142223 + (TCTCTG)n Simple_repeat Simple_repeat 1 360 0 1 797 201 73 22 109 chrUextra 27862459 27862551 -1142105 + (TCTCTG)n Simple_repeat Simple_repeat 6 89 0 1 797 2423 184 16 9 chrUextra 27863302 27863851 -1140805 - SAR_DM Satellite Satellite -674 798 246 1 797 1158 131 0 0 chrUextra 27863951 27864483 -1140173 + (TA)n Simple_repeat Simple_repeat 1 532 0 1 797 4813 2 7 7 chrUextra 27864600 27865149 -1139507 + LSU-rRNA_Dme rRNA rRNA 1234 1782 -2118 1 797 2819 165 9 6 chrUextra 27865249 27865798 -1138858 - SAR_DM Satellite Satellite -550 922 372 1 797 3770 83 46 31 chrUextra 27865898 27866446 -1138210 - Gypsy12_I LTR Gypsy -3960 1586 1031 1 797 2378 126 11 19 chrUextra 27866546 27867072 -1137584 - DMSAT6 Satellite Satellite -50 522 1 1 797 313 287 8 54 chrUextra 27867238 27867367 -1137289 - Gypsy12_LTR LTR Gypsy -1535 801 679 1 797 950 222 54 73 chrUextra 27867427 27867742 -1136914 - Gypsy12_LTR LTR Gypsy -1777 559 251 1 797 2807 158 15 9 chrUextra 27867842 27868390 -1136266 - SAR_DM Satellite Satellite -536 936 386 1 797 2580 85 21 25 chrUextra 27868519 27869038 -1135618 - DMSAT6 Satellite Satellite -7 517 1 1 797 4202 35 2 0 chrUextra 27869138 27869681 -1134975 + NOMAD_I LTR Gypsy 5270 5813 -759 1 797 5025 4 2 2 chrUextra 27870434 27870982 -1133674 + SSU-rRNA_Dme rRNA rRNA 1317 1864 -131 1 797 2643 170 6 8 chrUextra 27871082 27871609 -1133047 - SAR_DM Satellite Satellite -621 851 326 1 797 1620 0 0 0 chrUextra 27872381 27872796 -1131860 + (TTGTG)n Simple_repeat Simple_repeat 1 415 0 1 797 1104 8 0 0 chrUextra 27872796 27872918 -1131738 + DMRT1B LINE R1 3536 3657 -1526 1 797 510 169 51 0 chrUextra 27873062 27873383 -1131273 + GA-rich Low_complexity Low_complexity 1 337 0 1 797 554 155 41 18 chrUextra 27873402 27873573 -1131083 + GA-rich Low_complexity Low_complexity 5 179 0 1 797 2638 93 16 21 chrUextra 27873707 27874222 -1130434 - DMSAT6 Satellite Satellite 0 511 1 1 797 2691 186 15 24 chrUextra 27874322 27875513 -1129143 - DMSAT6 Satellite Satellite -23 1180 1 1 797 2586 188 6 6 chrUextra 27875620 27876161 -1128495 - SAR_DM Satellite Satellite -396 1076 536 1 797 922 51 0 0 chrUextra 27876265 27876382 -1128274 + ARS406_DM Unknown Unknown 73 189 -164 1 797 1896 179 88 30 chrUextra 27876279 27876810 -1127846 - SAR_DM Satellite Satellite -203 1269 708 1 797 4789 7 0 2 chrUextra 27876910 27877457 -1127199 + LSU-rRNA_Dme rRNA rRNA 370 915 -2985 1 797 1827 0 0 0 chrUextra 27877557 27877755 -1126901 - LSU-rRNA_Dme rRNA rRNA -3702 198 1 1 797 21 95 0 0 chrUextra 27877767 27877830 -1126826 + AT_rich Low_complexity Low_complexity 1 63 0 1 797 35 24 0 0 chrUextra 27878043 27878085 -1126571 + AT_rich Low_complexity Low_complexity 1 42 0 1 797 2495 115 6 26 chrUextra 27878204 27878742 -1125914 + DMSAT6 Satellite Satellite 1 526 -64 1 797 1107 7 0 7 chrUextra 27878851 27878990 -1125666 + STALKER4_I LTR Gypsy 6393 6530 0 1 797 755 0 0 0 chrUextra 27878990 27879072 -1125584 + STALKER4_LTR LTR Gypsy 1 82 -320 1 797 1798 38 0 5 chrUextra 27879072 27879286 -1125370 + STALKER4_LTR LTR Gypsy 189 401 -1 1 797 2543 177 11 9 chrUextra 27879498 27880045 -1124611 - SAR_DM Satellite Satellite -621 851 304 1 797 370 6 0 163 chrUextra 27880439 27880654 -1124002 + (CATAG)n Simple_repeat Simple_repeat 1 180 0 1 797 1500 33 3 9 chrUextra 27881007 27881339 -1123317 + (TCTTG)n Simple_repeat Simple_repeat 1 330 0 1 797 681 0 93 0 chrUextra 27881439 27881568 -1123088 + (CATAG)n Simple_repeat Simple_repeat 5 145 0 1 797 1455 63 0 16 chrUextra 27881568 27881986 -1122670 + (TAGA)n Simple_repeat Simple_repeat 1 411 0 1 797 2335 129 4 45 chrUextra 27882121 27882607 -1122049 - DMSAT6 Satellite Satellite 0 470 5 1 797 462 18 0 0 chrUextra 27883222 27883277 -1121379 + (GAGAA)n Simple_repeat Simple_repeat 2 56 0 1 797 765 31 0 0 chrUextra 27883454 27883550 -1121106 + (TATTG)n Simple_repeat Simple_repeat 1 96 0 1 797 1294 45 6 6 chrUextra 27883552 27883731 -1120925 + (TTATA)n Simple_repeat Simple_repeat 2 180 0 1 797 1072 101 6 6 chrUextra 27883746 27883925 -1120731 + (TATTG)n Simple_repeat Simple_repeat 2 180 0 1 797 754 83 50 8 chrUextra 27884027 27884148 -1120508 - SAR_DM Satellite Satellite -976 496 371 1 797 1879 179 12 10 chrUextra 27884168 27884574 -1120082 + SAR_DM Satellite Satellite 399 805 -667 1 797 2024 9 0 9 chrUextra 27884674 27884904 -1119752 + MAX_LTR LTR Pao 93 320 -1 1 797 1620 19 0 0 chrUextra 27884904 27885211 -1119445 + (TTATA)n Simple_repeat Simple_repeat 1 307 0 1 797 2750 167 11 6 chrUextra 27885321 27885868 -1118788 - SAR_DM Satellite Satellite -539 933 384 1 797 277 176 0 19 chrUextra 27886011 27886063 -1118593 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 797 233 154 258 15 chrUextra 27886081 27886147 -1118509 - LSU-rRNA_Dme rRNA rRNA -1249 2651 2570 1 797 236 196 0 38 chrUextra 27886187 27886240 -1118416 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 797 266 196 0 19 chrUextra 27886280 27886332 -1118324 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 797 768 0 0 0 chrUextra 27886433 27886515 -1118141 - LSU-rRNA_Dme rRNA rRNA 0 3900 3819 1 797 2358 4 0 0 chrUextra 27886615 27886879 -1117777 - IDEFIX_LTR LTR Gypsy -330 264 1 1 797 2451 3 0 3 chrUextra 27886879 27887162 -1117494 - IDEFIX_I LTR Gypsy 0 5628 5347 1 797 5114 0 0 0 chrUextra 27887262 27887806 -1116850 - SSU-rRNA_Dme rRNA rRNA -1087 908 365 1 797 740 45 0 0 chrUextra 27887909 27887997 -1116659 - NTS_DM Other Other -152 88 1 1 797 1654 34 16 37 chrUextra 27887997 27888242 -1116414 - NTS_DM Other Other 0 240 1 1 797 1453 15 19 42 chrUextra 27888242 27888455 -1116201 - NTS_DM Other Other 0 240 33 1 797 2723 171 9 9 chrUextra 27888557 27889101 -1115555 + SAR_DM Satellite Satellite 397 940 -532 1 797 5097 4 0 0 chrUextra 27889201 27889747 -1114909 + SSU-rRNA_Dme rRNA rRNA 173 718 -1277 1 797 1620 0 0 0 chrUextra 27890493 27891039 -1113617 + (TAGA)n Simple_repeat Simple_repeat 1 546 0 1 797 1620 0 0 0 chrUextra 27891139 27891409 -1113247 + (CAAGA)n Simple_repeat Simple_repeat 1 270 0 1 797 22 56 0 0 chrUextra 27891820 27891856 -1112800 + AT_rich Low_complexity Low_complexity 1 36 0 1 797 268 176 0 19 chrUextra 27891869 27891921 -1112735 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 797 228 196 0 38 chrUextra 27891952 27892005 -1112651 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 797 233 216 0 19 chrUextra 27892138 27892190 -1112466 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 797 233 216 0 19 chrUextra 27892230 27892282 -1112374 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 797 27 0 0 0 chrUextra 27892284 27892311 -1112345 + AT_rich Low_complexity Low_complexity 1 27 0 1 797 5082 0 0 2 chrUextra 27892431 27892977 -1111679 + LSU-rRNA_Dme rRNA rRNA 2774 3318 -582 1 797 2562 175 29 11 chrUextra 27893077 27893621 -1111035 - SAR_DM Satellite Satellite -673 799 246 1 797 2396 104 21 30 chrUextra 27893726 27894253 -1110403 + DMSAT6 Satellite Satellite 1 521 -143 1 797 2769 166 11 6 chrUextra 27895017 27895561 -1109095 - SAR_DM Satellite Satellite -593 879 333 1 797 576 0 0 0 chrUextra 27895661 27895725 -1108931 + (TTCTC)n Simple_repeat Simple_repeat 3 66 0 1 797 1303 92 6 20 chrUextra 27896955 27897499 -1107157 + (CTATT)n Simple_repeat Simple_repeat 1 535 0 1 797 1533 180 20 9 chrUextra 27897599 27898142 -1106514 - SAR_DM Satellite Satellite -543 549 1 1 797 1663 196 67 80 chrUextra 27898245 27898791 -1105865 - TAHRE LINE telomeric -2832 7631 7168 1 797 2392 144 8 31 chrUextra 27898891 27899408 -1105248 - DMSAT6 Satellite Satellite -272 504 1 1 797 5030 2 2 2 chrUextra 27899537 27900083 -1104573 - LSU-rRNA_Dme rRNA rRNA -268 3632 3087 1 797 2221 175 29 55 chrUextra 27900184 27900729 -1103927 - SAR_DM Satellite Satellite -658 814 284 1 797 2453 99 9 58 chrUextra 27901475 27902014 -1102642 + DMSAT6 Satellite Satellite 1 513 -97 1 797 4875 2 6 6 chrUextra 27902121 27902666 -1101990 + LSU-rRNA_Dme rRNA rRNA 1166 1710 -2190 1 797 2504 80 29 15 chrUextra 27902766 27903311 -1101345 + DMSAT6 Satellite Satellite 1 553 -62 1 797 2482 85 11 55 chrUextra 27903416 27903956 -1100700 - DMSAT6 Satellite Satellite 0 516 1 1 797 398 173 37 15 chrUextra 27904056 27904191 -1100465 + GA-rich Low_complexity Low_complexity 5 142 0 1 797 571 137 65 0 chrUextra 27904191 27904239 -1100417 + polypurine Low_complexity Low_complexity 1 51 0 1 797 1469 11 0 6 chrUextra 27904239 27904415 -1100241 + (GAGAA)n Simple_repeat Simple_repeat 5 179 0 1 797 571 137 65 0 chrUextra 27904415 27904534 -1100122 + GA-rich Low_complexity Low_complexity 52 178 0 1 797 1172 36 0 0 chrUextra 27905346 27905484 -1099172 - DM1731_LTR LTR Copia -198 138 1 1 797 721 23 11 0 chrUextra 27905484 27905571 -1099085 - DM297_I LTR Gypsy -6079 88 1 1 797 2763 6 6 9 chrUextra 27905571 27905891 -1098765 - DM297_LTR LTR Gypsy 0 414 96 1 797 1620 0 0 0 chrUextra 27905991 27906303 -1098353 + (GAGAA)n Simple_repeat Simple_repeat 1 312 0 1 797 2494 87 20 22 chrUextra 27906639 27907181 -1097475 - DMSAT6 Satellite Satellite -71 541 1 1 797 2428 112 6 31 chrUextra 27907281 27907804 -1096852 - DMSAT6 Satellite Satellite -80 510 1 1 797 4677 26 31 0 chrUextra 27907926 27908471 -1096185 + IVK_DM LINE I 3715 4276 -1126 1 797 2655 87 18 35 chrUextra 27908571 27909116 -1095540 - DMSAT6 Satellite Satellite -237 536 1 1 797 1587 5 0 0 chrUextra 27909216 27909435 -1095221 + (GAGAA)n Simple_repeat Simple_repeat 1 219 0 1 797 828 72 0 0 chrUextra 27909435 27909560 -1095096 + (AGATG)n Simple_repeat Simple_repeat 2 126 0 1 797 1281 56 0 0 chrUextra 27909560 27909739 -1094917 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 797 4935 2 2 6 chrUextra 27909861 27910406 -1094250 + LSU-rRNA_Dme rRNA rRNA 873 1415 -2485 1 797 1158 122 0 0 chrUextra 27910506 27910944 -1093712 + (TA)n Simple_repeat Simple_repeat 1 438 0 1 797 937 0 0 0 chrUextra 27910946 27911051 -1093605 + NOMAD_LTR LTR Gypsy 1 105 -413 1 797 1828 22 4 59 chrUextra 27911151 27911390 -1093266 - MDG3_LTR LTR Gypsy -41 226 1 1 797 1324 33 17 17 chrUextra 27911390 27911549 -1093107 + FW_DM LINE Jockey 1668 1902 -2790 1 797 564 71 0 23 chrUextra 27911796 27911883 -1092773 + NTS_DM Other Other 117 201 -39 1 797 21 57 0 0 chrUextra 27911883 27911918 -1092738 + AT_rich Low_complexity Low_complexity 1 35 0 1 797 845 37 9 36 chrUextra 27911944 27912056 -1092600 + NTS_DM Other Other 25 133 -107 1 797 864 10 0 0 chrUextra 27912056 27912152 -1092504 + NTS_DM Other Other 38 133 -107 1 797 1294 54 16 21 chrUextra 27912152 27912340 -1092316 + NTS_DM Other Other 38 224 -16 1 797 2455 104 20 15 chrUextra 27912441 27912986 -1091670 - DMSAT6 Satellite Satellite -1 547 1 1 797 5065 0 0 2 chrUextra 27913086 27913631 -1091025 + LSU-rRNA_Dme rRNA rRNA 2763 3306 -594 1 797 394 213 21 75 chrUextra 27913735 27913923 -1090733 + CT-rich Low_complexity Low_complexity 1 178 0 1 797 417 393 0 17 chrUextra 27913937 27914118 -1090538 + polypyrimidine Low_complexity Low_complexity 1 178 0 1 797 4036 23 175 0 chrUextra 27914405 27914919 -1089737 - DMCR1A LINE CR1 -1536 2934 2331 1 797 1656 0 0 0 chrUextra 27915020 27915196 -1089460 + LSU-rRNA_Dme rRNA rRNA 3725 3900 0 1 797 27 0 0 0 chrUextra 27915268 27915295 -1089361 + AT_rich Low_complexity Low_complexity 1 27 0 1 797 268 196 0 19 chrUextra 27915297 27915349 -1089307 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 797 268 196 0 19 chrUextra 27915389 27915441 -1089215 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 797 238 196 0 38 chrUextra 27915481 27915534 -1089122 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 797 2774 165 9 9 chrUextra 27916307 27916851 -1087805 - SAR_DM Satellite Satellite -549 923 380 1 797 4368 6 0 2 chrUextra 27917020 27917495 -1087161 + SSU-rRNA_Dme rRNA rRNA 1 474 -1521 1 797 2413 196 13 6 chrUextra 27917595 27918134 -1086522 - SAR_DM Satellite Satellite -684 788 246 1 797 256 156 0 0 chrUextra 27918094 27918139 -1086517 + ARS406_DM Unknown Unknown 1 45 -308 1 797 207 250 0 0 chrUextra 27918245 27918289 -1086367 + (CTG)n Simple_repeat Simple_repeat 1 44 0 1 798 2825 161 17 4 chrUextra 27918883 27919418 -1085238 - SAR_DM Satellite Satellite -610 862 321 1 798 2491 194 9 4 chrUextra 27920173 27920715 -1083941 + SAR_DM Satellite Satellite 246 790 -682 1 798 734 0 0 0 chrUextra 27920815 27920895 -1083761 - NTS_DM Other Other -123 117 38 1 798 918 28 0 0 chrUextra 27920895 27921002 -1083654 - NTS_DM Other Other -107 133 27 1 798 1350 18 0 6 chrUextra 27921059 27921224 -1083432 - NTS_DM Other Other -39 201 38 1 798 936 9 0 27 chrUextra 27921224 27921336 -1083320 - NTS_DM Other Other -107 133 25 1 798 1620 0 0 0 chrUextra 27921481 27921661 -1082995 + (CAATA)n Simple_repeat Simple_repeat 1 180 0 1 798 1021 86 12 6 chrUextra 27921663 27921826 -1082830 + (TATAA)n Simple_repeat Simple_repeat 5 168 0 1 798 1371 57 0 0 chrUextra 27921826 27922003 -1082653 + (CAATA)n Simple_repeat Simple_repeat 2 178 0 1 798 4688 26 2 0 chrUextra 27922747 27923291 -1081365 - MDG1_I LTR Gypsy -664 5932 5388 1 798 1557 42 3 15 chrUextra 27923391 27923787 -1080869 + (TTCTC)n Simple_repeat Simple_repeat 1 391 0 1 798 225 140 53 0 chrUextra 27923779 27923836 -1080820 + CT-rich Low_complexity Low_complexity 2 61 0 1 798 198 23 64 64 chrUextra 27923869 27923916 -1080740 + GA-rich Low_complexity Low_complexity 3 49 0 1 798 4723 18 6 0 chrUextra 27924035 27924579 -1080077 + ROO_I LTR Pao 6681 7227 -1029 1 798 2158 80 7 0 chrUextra 27924679 27924968 -1079688 - R1_DM LINE R1 -5065 291 1 1 798 1015 26 0 0 chrUextra 27925001 27925115 -1079541 - R1_DM LINE R1 0 5356 5243 1 798 952 27 0 0 chrUextra 27925112 27925223 -1079433 - R1_DM LINE R1 -290 5066 4956 1 798 2502 83 15 66 chrUextra 27925339 27925867 -1078789 - DMSAT6 Satellite Satellite 0 500 1 1 798 28 0 0 0 chrUextra 27926181 27926209 -1078447 + AT_rich Low_complexity Low_complexity 1 28 0 1 798 610 140 18 0 chrUextra 27926232 27926346 -1078310 - HETA LINE telomeric -171 5910 5795 1 798 324 228 180 90 chrUextra 27926333 27926511 -1078145 - TART LINE telomeric -4163 10314 10121 1 798 4986 0 0 2 chrUextra 27926611 27927155 -1077501 + FW_DM LINE Jockey 3634 4176 -516 1 798 1087 115 6 11 chrUextra 27927262 27927438 -1077218 - SAR_DM Satellite Satellite -569 903 729 1 798 1689 172 9 15 chrUextra 27927456 27927798 -1076858 - SAR_DM Satellite Satellite -466 1006 667 1 798 2662 165 24 11 chrUextra 27927899 27928432 -1076224 - SAR_DM Satellite Satellite -651 821 282 1 798 4916 4 4 4 chrUextra 27928543 27929087 -1075569 - LSU-rRNA_Dme rRNA rRNA -2311 1589 1046 1 798 551 85 12 0 chrUextra 27929187 27929269 -1075387 + (ATAAG)n Simple_repeat Simple_repeat 1 83 0 1 798 1104 0 0 22 chrUextra 27929269 27929333 -1075323 + (CAAG)n Simple_repeat Simple_repeat 1 64 0 1 798 1231 0 31 0 chrUextra 27929333 27929492 -1075164 + (CAAGA)n Simple_repeat Simple_repeat 1 164 0 1 798 1104 0 0 22 chrUextra 27929492 27929553 -1075103 + (CAAG)n Simple_repeat Simple_repeat 1 60 0 1 798 941 6 78 0 chrUextra 27929553 27929719 -1074937 + (CAAGA)n Simple_repeat Simple_repeat 1 179 0 1 798 1104 0 0 22 chrUextra 27929719 27929731 -1074925 + (CAAG)n Simple_repeat Simple_repeat 1 12 0 1 798 5055 0 0 2 chrUextra 27929831 27930375 -1074281 - LSU-rRNA_Dme rRNA rRNA -591 3309 2767 1 798 300 111 0 0 chrUextra 27930475 27930520 -1074136 + (TATG)n Simple_repeat Simple_repeat 2 46 0 1 798 1158 122 0 0 chrUextra 27930519 27930883 -1073773 + (TA)n Simple_repeat Simple_repeat 1 364 0 1 798 1233 0 0 0 chrUextra 27930887 27931018 -1073638 - NOMAD_LTR LTR Gypsy 0 518 388 1 798 1134 120 0 0 chrUextra 27931118 27931293 -1073363 + (TA)n Simple_repeat Simple_repeat 2 176 0 1 798 313 271 74 0 chrUextra 27931471 27931593 -1073063 + MICROPIA_I LTR Gypsy 1003 1133 -3343 1 798 332 271 0 0 chrUextra 27931576 27931661 -1072995 + MICROPIA_I LTR Gypsy 1682 1766 -2710 1 798 1163 28 7 0 chrUextra 27931761 27931903 -1072753 - NINJA_I LTR Pao -1751 4260 4118 1 798 3342 20 22 0 chrUextra 27931903 27932304 -1072352 - NINJA_I LTR Pao -3200 2811 2402 1 798 468 48 0 0 chrUextra 27932404 27932467 -1072189 + (TTCTC)n Simple_repeat Simple_repeat 2 64 0 1 798 1620 0 0 0 chrUextra 27932480 27932945 -1071711 + (GAGAA)n Simple_repeat Simple_repeat 1 465 0 1 798 2214 191 22 18 chrUextra 27933047 27933590 -1071066 - SAR_DM Satellite Satellite -359 1113 569 1 798 5021 0 0 0 chrUextra 27933690 27934233 -1070423 - ROO_I LTR Pao -5749 2507 1965 1 798 761 12 0 0 chrUextra 27934333 27934419 -1070237 + DMRT1B LINE R1 5098 5183 0 1 798 4096 13 0 0 chrUextra 27934422 27934876 -1069780 - R1_DM LINE R1 -760 4596 4143 1 798 2641 177 9 9 chrUextra 27934976 27935519 -1069137 + SAR_DM Satellite Satellite 436 978 -494 1 798 4443 35 0 2 chrUextra 27935619 27936162 -1068494 - ROO_I LTR Pao -3119 5137 4596 1 798 2560 93 14 43 chrUextra 27936283 27936767 -1067889 + DMSAT6 Satellite Satellite 1 470 0 1 798 5064 2 2 0 chrUextra 27937548 27938091 -1066565 + SSU-rRNA_Dme rRNA rRNA 198 741 -1254 1 798 2075 143 157 0 chrUextra 27938269 27938734 -1065922 - DMRT1C LINE R1 -57 5386 4849 1 798 2500 187 15 6 chrUextra 27938835 27939373 -1065283 - SAR_DM Satellite Satellite -684 788 246 1 798 747 0 0 0 chrUextra 27939477 27939560 -1065096 + (TTGTG)n Simple_repeat Simple_repeat 3 85 0 1 798 202 265 0 0 chrUextra 27940122 27940171 -1064485 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 798 2823 176 6 2 chrUextra 27940765 27941306 -1063350 - SAR_DM Satellite Satellite -587 885 343 1 798 5029 0 0 2 chrUextra 27941406 27941949 -1062707 + LSU-rRNA_Dme rRNA rRNA 695 1236 -2664 1 798 2450 175 11 9 chrUextra 27942049 27942592 -1062064 + SAR_DM Satellite Satellite 1 543 -396 1 798 1158 122 0 0 chrUextra 27942694 27942980 -1061676 + (TA)n Simple_repeat Simple_repeat 1 286 0 1 798 249 303 60 40 chrUextra 27942983 27943134 -1061522 - Gypsy4_I LTR Gypsy -192 6096 5943 1 798 2726 68 23 32 chrUextra 27943351 27943874 -1060782 - DMSAT6 Satellite Satellite 0 518 1 1 798 4912 0 6 4 chrUextra 27943976 27944518 -1060138 - SSU-rRNA_Dme rRNA rRNA -414 1581 1039 1 798 4105 7 0 2 chrUextra 27944618 27945070 -1059586 + LSU-rRNA_Dme rRNA rRNA 2182 2632 -1268 1 798 799 0 11 0 chrUextra 27945070 27945160 -1059496 + R1_DM LINE R1 1 91 -5265 1 798 470 19 0 0 chrUextra 27945260 27945313 -1059343 - NTS_DM Other Other -150 90 38 1 798 870 0 0 0 chrUextra 27945313 27945409 -1059247 - NTS_DM Other Other -107 133 38 1 798 860 9 9 36 chrUextra 27945409 27945521 -1059135 - NTS_DM Other Other -107 133 25 1 798 21 57 0 0 chrUextra 27945547 27945582 -1059074 + AT_rich Low_complexity Low_complexity 1 35 0 1 798 1316 24 0 6 chrUextra 27945582 27945747 -1058909 - NTS_DM Other Other -39 201 38 1 798 428 18 0 0 chrUextra 27945747 27945802 -1058854 - NTS_DM Other Other -107 133 79 1 798 2452 96 20 30 chrUextra 27946544 27947086 -1057570 - DMSAT6 Satellite Satellite -114 536 1 1 798 972 60 0 18 chrUextra 27947193 27947728 -1056928 - RSP Satellite Satellite 0 525 1 1 798 202 265 0 0 chrUextra 27948298 27948347 -1056309 + (CAG)n Simple_repeat Simple_repeat 2 50 0 1 798 1159 20 0 13 chrUextra 27949112 27949261 -1055395 - NTS_DM Other Other -56 184 38 1 798 928 9 0 27 chrUextra 27949261 27949373 -1055283 - NTS_DM Other Other -107 133 25 1 798 22 56 0 0 chrUextra 27949399 27949435 -1055221 + AT_rich Low_complexity Low_complexity 1 36 0 1 798 277 176 0 19 chrUextra 27949448 27949500 -1055156 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 798 266 196 0 19 chrUextra 27949531 27949583 -1055073 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 798 2451 31 0 9 chrUextra 27949754 27950074 -1054582 + HMSBEAGLE_I LTR Gypsy 478 796 -5733 1 798 953 35 52 12 chrUextra 27950074 27950246 -1054410 + (TTA)n Simple_repeat Simple_repeat 1 179 0 1 798 2451 0 0 4300 chrUextra 27950246 27950296 -1054360 + HMSBEAGLE_I LTR Gypsy 797 802 -5727 1 798 2618 101 21 11 chrUextra 27950396 27950919 -1053737 + DMSAT6 Satellite Satellite 1 528 -64 1 798 2610 73 25 29 chrUextra 27951055 27951580 -1053076 + DMSAT6 Satellite Satellite 1 522 0 1 798 2483 184 15 7 chrUextra 27951680 27952218 -1052438 - SAR_DM Satellite Satellite -685 787 246 1 798 540 0 0 0 chrUextra 27953242 27953302 -1051354 + (A)n Simple_repeat Simple_repeat 1 60 0 1 798 2547 83 22 52 chrUextra 27953607 27954143 -1050513 + DMSAT6 Satellite Satellite 1 519 0 1 798 430 0 0 57 chrUextra 27954246 27954299 -1050357 - NTS_DM Other Other -166 74 25 1 798 1332 18 0 6 chrUextra 27954351 27954516 -1050140 - NTS_DM Other Other -39 201 38 1 798 928 9 0 27 chrUextra 27954516 27954628 -1050028 - NTS_DM Other Other -107 133 25 1 798 22 56 0 0 chrUextra 27954654 27954690 -1049966 + AT_rich Low_complexity Low_complexity 1 36 0 1 798 277 176 0 19 chrUextra 27954703 27954755 -1049901 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 798 5025 0 0 2 chrUextra 27954887 27955428 -1049228 - SSU-rRNA_Dme rRNA rRNA -1029 966 427 1 798 1174 51 17 22 chrUextra 27955529 27955710 -1048946 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 798 711 121 34 34 chrUextra 27955720 27955899 -1048757 + CT-rich Low_complexity Low_complexity 1 179 0 1 798 356 194 78 12 chrUextra 27955902 27956069 -1048587 + (CATCT)n Simple_repeat Simple_repeat 3 180 0 1 798 2377 192 11 7 chrUextra 27956169 27956710 -1047946 + SAR_DM Satellite Satellite 253 795 -677 1 798 2645 168 20 6 chrUextra 27956810 27957350 -1047306 - SAR_DM Satellite Satellite -554 918 371 1 798 717 163 34 19 chrUextra 27958733 27959269 -1045387 + GA-rich Low_complexity Low_complexity 1 544 0 1 798 4452 4 2 2 chrUextra 27960017 27960506 -1044150 + LSU-rRNA_Dme rRNA rRNA 2071 2559 -1341 1 798 425 0 0 0 chrUextra 27960508 27960554 -1044102 + R2_DM LINE R2 2554 2599 -1008 1 798 4827 9 6 0 chrUextra 27960654 27961194 -1043462 - DOC2_DM LINE Jockey -2532 2261 1719 1 798 2441 182 11 11 chrUextra 27961299 27961833 -1042823 - SAR_DM Satellite Satellite -514 958 425 1 798 2283 181 25 13 chrUextra 27961934 27962460 -1042196 - SAR_DM Satellite Satellite -695 777 246 1 798 324 111 19 0 chrUextra 27962420 27962474 -1042182 + ARS406_DM Unknown Unknown 1 55 -298 1 798 2571 100 26 17 chrUextra 27962579 27963107 -1041549 + DMSAT6 Satellite Satellite 1 533 -164 1 798 827 11 0 0 chrUextra 27963214 27963304 -1041352 - NTS_DM Other Other -150 90 1 1 798 1871 17 17 17 chrUextra 27963304 27963544 -1041112 - NTS_DM Other Other 0 240 1 1 798 1578 19 19 19 chrUextra 27963544 27963754 -1040902 - NTS_DM Other Other 0 240 31 1 798 2448 4 0 0 chrUextra 27964526 27964793 -1039863 - MDG3_LTR LTR Gypsy 0 267 1 1 798 2042 12 0 0 chrUextra 27964793 27965034 -1039622 - MDG3_I LTR Gypsy 0 4986 4746 1 798 2567 109 19 11 chrUextra 27965135 27965674 -1038982 + DMSAT6 Satellite Satellite 1 543 -82 1 798 2737 165 11 7 chrUextra 27965774 27966312 -1038344 + SAR_DM Satellite Satellite 381 920 -552 1 798 878 19 9 27 chrUextra 27966414 27966525 -1038131 + NTS_DM Other Other 25 133 -107 1 798 870 0 0 0 chrUextra 27966525 27966621 -1038035 + NTS_DM Other Other 38 133 -107 1 798 1477 20 20 25 chrUextra 27966621 27966825 -1037831 + NTS_DM Other Other 38 240 0 1 798 1127 23 0 0 chrUextra 27966825 27966954 -1037702 + NTS_DM Other Other 1 129 -111 1 798 1408 62 0 0 chrUextra 27967054 27967232 -1037424 - R2_DM LINE R2 -1636 1971 1794 1 798 891 39 0 0 chrUextra 27967230 27967333 -1037323 - LSU-rRNA_Dme rRNA rRNA -1320 2580 2478 1 798 2281 22 4 14 chrUextra 27967318 27967594 -1037062 - LSU-rRNA_Dme rRNA rRNA -1531 2369 2097 1 798 4522 19 35 4 chrUextra 27967694 27968234 -1036422 + R1_DM LINE R1 2665 3221 -2135 1 798 2439 109 24 19 chrUextra 27968334 27968874 -1035782 + DMSAT6 Satellite Satellite 1 542 -54 1 798 2605 180 7 4 chrUextra 27968974 27969514 -1035142 - SAR_DM Satellite Satellite -627 845 304 1 798 2650 87 19 25 chrUextra 27969630 27970153 -1034503 - DMSAT6 Satellite Satellite 0 519 1 1 798 2282 82 2 48 chrUextra 27970253 27970792 -1033864 + DMSAT6 Satellite Satellite 1 513 -149 1 798 256 196 0 19 chrUextra 27970920 27970972 -1033684 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 798 3270 11 0 0 chrUextra 27971073 27971431 -1033225 - LSU-rRNA_Dme rRNA rRNA 0 3900 3543 1 798 395 0 0 163 chrUextra 27971855 27972070 -1032586 + (CTATG)n Simple_repeat Simple_repeat 1 180 0 1 798 1203 84 34 5 chrUextra 27972809 27973140 -1031516 + PROTOP_A DNA P 569 773 -332 1 798 1104 67 0 0 chrUextra 27973184 27973348 -1031308 - DOC LINE Jockey 0 4725 4562 1 798 1547 5 0 5 chrUextra 27973777 27973987 -1030669 + (TTCTC)n Simple_repeat Simple_repeat 1 209 0 1 798 2581 175 21 8 chrUextra 27974088 27974619 -1030037 + SAR_DM Satellite Satellite 539 1076 -396 1 798 384 23 0 0 chrUextra 27974726 27974769 -1029887 - NTS_DM Other Other -197 43 1 1 798 1507 20 20 20 chrUextra 27974769 27974972 -1029684 - NTS_DM Other Other 0 240 38 1 798 870 0 0 0 chrUextra 27974972 27975068 -1029588 - NTS_DM Other Other -107 133 38 1 798 890 9 9 27 chrUextra 27975068 27975179 -1029477 - NTS_DM Other Other -107 133 25 1 798 4117 38 15 2 chrUextra 27975376 27975904 -1028752 - TAHRE LINE telomeric -2156 8307 7773 1 798 2602 85 16 41 chrUextra 27976026 27976543 -1028113 + DMSAT6 Satellite Satellite 1 503 -3 1 798 1620 0 0 0 chrUextra 27976652 27976936 -1027720 + (TCTTG)n Simple_repeat Simple_repeat 1 284 0 1 798 997 72 9 20 chrUextra 27977283 27977821 -1026835 - RSP Satellite Satellite -23 532 1 1 798 2535 99 13 15 chrUextra 27977923 27978457 -1026199 + DMSAT6 Satellite Satellite 1 532 -82 1 798 270 0 0 0 chrUextra 27978560 27978589 -1026067 - NTS_DM Other Other -211 29 1 1 798 1951 8 17 13 chrUextra 27978589 27978828 -1025828 - NTS_DM Other Other 0 240 1 1 798 1958 8 17 13 chrUextra 27978828 27979067 -1025589 - NTS_DM Other Other 0 240 1 1 798 531 0 0 0 chrUextra 27979838 27979897 -1024759 + (TTCTC)n Simple_repeat Simple_repeat 3 61 0 1 798 524 87 0 11 chrUextra 27979899 27979992 -1024664 + (CGAGA)n Simple_repeat Simple_repeat 4 95 0 1 798 1620 0 0 0 chrUextra 27979993 27980353 -1024303 + (GAGAA)n Simple_repeat Simple_repeat 1 360 0 1 798 2626 182 9 2 chrUextra 27980478 27981013 -1023643 - SAR_DM Satellite Satellite -602 870 332 1 798 1620 22 2 0 chrUextra 27981115 27981653 -1023003 + (TATAA)n Simple_repeat Simple_repeat 1 538 0 1 798 2433 101 23 44 chrUextra 27981753 27982272 -1022384 - DMSAT6 Satellite Satellite -281 507 1 1 798 4887 4 2 2 chrUextra 27982391 27982929 -1021727 + LSU-rRNA_Dme rRNA rRNA 811 1348 -2552 1 798 1620 11 0 0 chrUextra 27983029 27983315 -1021341 + (CACAA)n Simple_repeat Simple_repeat 1 286 0 1 798 2241 16 0 0 chrUextra 27983315 27983567 -1021089 - DMRT1B LINE R1 -140 5043 4792 1 798 4484 2 2 0 chrUextra 27984305 27984785 -1019871 + SSU-rRNA_Dme rRNA rRNA 1515 1995 0 1 798 4926 2 0 4 chrUextra 27984943 27985481 -1019175 + LSU-rRNA_Dme rRNA rRNA 1979 2514 -1386 1 798 1620 33 0 0 chrUextra 27985605 27986117 -1018539 + (TTCTC)n Simple_repeat Simple_repeat 1 512 0 1 798 1101 15 15 15 chrUextra 27986219 27986355 -1018301 - DM297_LTR LTR Gypsy -278 136 1 1 798 667 190 0 0 chrUextra 27986607 27986728 -1017928 + DMRT1B LINE R1 2589 2709 -2474 1 798 2580 88 26 18 chrUextra 27987526 27988033 -1016623 - DMSAT6 Satellite Satellite 0 510 1 1 798 281 106 0 21 chrUextra 27988136 27988184 -1016472 + HMSBEAGLE_I LTR Gypsy 175 221 -6308 1 798 2487 7 7 0 chrUextra 27988374 27988671 -1015985 - DOC LINE Jockey 0 4725 4427 1 798 2626 81 43 14 chrUextra 27988796 27989309 -1015347 - DMSAT6 Satellite Satellite 0 528 1 1 798 4270 2 4 6 chrUextra 27989409 27989890 -1014766 + LSU-rRNA_Dme rRNA rRNA 1312 1791 -2109 1 798 912 9 0 0 chrUextra 27990480 27990585 -1014071 + (CAAGA)n Simple_repeat Simple_repeat 1 105 0 1 798 34 24 0 0 chrUextra 27991053 27991094 -1013562 + AT_rich Low_complexity Low_complexity 1 41 0 1 798 579 15 0 0 chrUextra 27991323 27991391 -1013265 + (TTCTC)n Simple_repeat Simple_repeat 5 72 0 1 798 2783 23 29 3 chrUextra 27991961 27992309 -1012347 + TABOR_I LTR Gypsy 1109 1465 -4871 1 798 876 34 89 17 chrUextra 27992284 27992464 -1012192 + TABOR_I LTR Gypsy 5972 6164 -172 1 798 34 0 0 0 chrUextra 27992464 27992498 -1012158 + AT_rich Low_complexity Low_complexity 1 34 0 1 798 4918 0 0 4 chrUextra 27992598 27993135 -1011521 + SSU-rRNA_Dme rRNA rRNA 534 1068 -927 1 798 439 42 0 27 chrUextra 27993872 27993946 -1010710 + NTS_DM Other Other 130 201 -39 1 798 890 9 9 27 chrUextra 27993998 27994109 -1010547 + NTS_DM Other Other 25 133 -107 1 798 1332 18 0 6 chrUextra 27994109 27994274 -1010382 + NTS_DM Other Other 38 201 -39 1 798 610 40 0 13 chrUextra 27994333 27994409 -1010247 + NTS_DM Other Other 27 101 -139 1 798 411 19 0 19 chrUextra 27994509 27994562 -1010094 + LSU-rRNA_Dme rRNA rRNA 1740 1791 -2109 1 798 4123 2 0 0 chrUextra 27994604 27995046 -1009610 + LSU-rRNA_Dme rRNA rRNA 1788 2229 -1671 1 798 2263 96 243 17 chrUextra 27995146 27995611 -1009045 + ACCORD2_I LTR Gypsy 1205 1774 -5438 1 798 643 51 0 0 chrUextra 27995604 27995683 -1008973 + ACCORD2_I LTR Gypsy 7122 7200 -12 1 798 34 24 0 0 chrUextra 27996151 27996192 -1008464 + AT_rich Low_complexity Low_complexity 1 41 0 1 798 2388 114 4 73 chrUextra 27996435 27996928 -1007728 - DMSAT6 Satellite Satellite -3 467 9 1 798 1024 43 242 23 chrUextra 27997057 27997272 -1007384 + ACCORD2_I LTR Gypsy 1513 1774 -5438 1 798 696 68 0 0 chrUextra 27997265 27997353 -1007303 + ACCORD2_I LTR Gypsy 7122 7209 -3 1 798 1826 28 0 18 chrUextra 27997351 27997569 -1007087 + ACCORD2_LTR LTR Gypsy 1 214 -1 1 798 1578 28 0 0 chrUextra 27997698 27998055 -1006601 + (GAGAA)n Simple_repeat Simple_repeat 1 357 0 1 798 4811 9 4 0 chrUextra 27998331 27998868 -1005788 + R1_DM LINE R1 2570 3108 -2248 1 798 986 73 8 19 chrUextra 27998986 27999505 -1005151 + RSP Satellite Satellite 1 513 0 1 798 3640 78 15 4 chrUextra 28000242 28000779 -1003877 - PROTOP DNA P -3741 739 197 1 798 2595 100 17 8 chrUextra 28001515 28002051 -1002605 + DMSAT6 Satellite Satellite 1 540 0 1 798 4427 52 2 2 chrUextra 28002151 28002687 -1001969 + R1_DM LINE R1 1037 1572 -3784 1 798 4657 17 2 4 chrUextra 28002787 28003323 -1001333 - R1_DM LINE R1 -1407 3949 3415 1 798 2250 176 12 12 chrUextra 28004061 28004549 -1000107 - SAR_DM Satellite Satellite -478 994 507 1 798 252 0 0 0 chrUextra 28004549 28004577 -1000079 + (T)n Simple_repeat Simple_repeat 1 28 0 1 798 1512 0 0 0 chrUextra 28005331 28005499 -999157 + (CAAGA)n Simple_repeat Simple_repeat 1 168 0 1 798 939 78 0 0 chrUextra 28005967 28006109 -998547 + (CTAGT)n Simple_repeat Simple_repeat 3 144 0 1 798 1620 0 0 13 chrUextra 28006110 28006503 -998153 + (CTAG)n Simple_repeat Simple_repeat 1 388 0 1 798 1401 46 0 0 chrUextra 28006887 28007126 -997530 + (CAAGA)n Simple_repeat Simple_repeat 1 239 0 1 798 232 200 0 16 chrUextra 28007611 28007672 -996984 + (TTA)n Simple_repeat Simple_repeat 2 61 0 1 798 2294 106 35 62 chrUextra 28007893 28008411 -996245 + DMSAT6 Satellite Satellite 1 503 -3 1 798 4987 0 4 0 chrUextra 28008511 28009047 -995609 - LSU-rRNA_Dme rRNA rRNA -61 3839 3302 1 798 207 196 0 21 chrUextra 28009447 28009494 -995162 + (CTCG)n Simple_repeat Simple_repeat 1 46 0 1 798 2419 0 0 0 chrUextra 28009783 28010046 -994610 - Stalker2_LTR LTR Gypsy -161 263 1 1 798 2040 7 4 0 chrUextra 28010046 28010319 -994337 - Stalker2_I LTR Gypsy 0 7402 7129 1 798 2751 88 22 4 chrUextra 28010419 28010954 -993702 + DMSAT6 Satellite Satellite 1 545 -97 1 798 2621 87 2 60 chrUextra 28011054 28011589 -993067 + DMSAT6 Satellite Satellite 1 504 0 1 798 2714 182 29 17 chrUextra 28012336 28013487 -991169 - DMSAT6 Satellite Satellite 0 1164 1 1 798 3791 0 0 0 chrUextra 28013594 28014020 -990636 + DOC LINE Jockey 4300 4725 0 1 798 905 0 66 0 chrUextra 28014023 28014129 -990527 - Gypsy4_I LTR Gypsy -2448 3840 3728 1 798 1747 18 13 18 chrUextra 28014230 28014455 -990201 - NTS_DM Other Other -16 224 1 1 798 1477 20 20 25 chrUextra 28014455 28014659 -989997 - NTS_DM Other Other 0 240 38 1 798 870 0 0 0 chrUextra 28014659 28014755 -989901 - NTS_DM Other Other -107 133 38 1 798 1620 43 0 2 chrUextra 28014881 28015392 -989264 + (TTCTC)n Simple_repeat Simple_repeat 1 509 0 1 798 2157 80 9 6 chrUextra 28015696 28016034 -988622 + S_DM DNA Tc1 1 339 -1397 1 798 4109 52 0 0 chrUextra 28016134 28016669 -987987 + IDEFIX_I LTR Gypsy 4691 5225 -403 1 798 873 19 0 0 chrUextra 28016769 28016872 -987784 + (TTGTG)n Simple_repeat Simple_repeat 1 103 0 1 798 1473 36 0 19 chrUextra 28016883 28017301 -987355 + (TTGTG)n Simple_repeat Simple_repeat 1 409 0 1 798 2548 173 8 11 chrUextra 28017404 28017937 -986719 - SAR_DM Satellite Satellite -446 1026 496 1 798 2418 101 6 39 chrUextra 28018071 28018554 -986102 + DMSAT6 Satellite Satellite 1 467 -3 1 798 4860 2 4 4 chrUextra 28018674 28019209 -985447 + SSU-rRNA_Dme rRNA rRNA 815 1349 -646 1 798 21 36 0 0 chrUextra 28021863 28021891 -982765 + AT_rich Low_complexity Low_complexity 1 28 0 1 798 928 9 0 27 chrUextra 28021917 28022029 -982627 + NTS_DM Other Other 25 133 -107 1 798 1332 18 0 6 chrUextra 28022029 28022194 -982462 + NTS_DM Other Other 38 201 -39 1 798 21 57 0 0 chrUextra 28022194 28022229 -982427 + AT_rich Low_complexity Low_complexity 1 35 0 1 798 825 37 9 27 chrUextra 28022255 28022366 -982290 + NTS_DM Other Other 25 133 -107 1 798 1328 6 0 30 chrUextra 28022525 28022692 -981964 - NTS_DM Other Other -78 162 1 1 798 1972 4 17 13 chrUextra 28022692 28022931 -981725 - NTS_DM Other Other 0 240 1 1 798 576 0 49 37 chrUextra 28022931 28023013 -981643 - NTS_DM Other Other 0 240 158 1 798 2503 113 19 21 chrUextra 28023113 28023646 -981010 + DMSAT6 Satellite Satellite 1 531 -141 1 798 1719 87 129 21 chrUextra 28023747 28024119 -980537 + Gypsy12_I LTR Gypsy 4879 5290 -256 1 798 386 196 38 38 chrUextra 28024112 28024218 -980438 + Gypsy12_LTR LTR Gypsy 293 398 -1938 1 798 432 106 43 86 chrUextra 28024188 28024281 -980375 + Gypsy12_I LTR Gypsy 27 115 -5431 1 798 240 35 0 0 chrUextra 28024821 28024850 -979806 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 798 3656 67 0 11 chrUextra 28025648 28026181 -978475 - NOMAD_I LTR Gypsy -702 5870 5344 1 798 4605 28 4 2 chrUextra 28026914 28027447 -977209 - R1_DM LINE R1 -1929 3427 2894 1 798 1158 139 0 0 chrUextra 28028180 28028699 -975957 + (TA)n Simple_repeat Simple_repeat 1 519 0 1 798 4895 2 0 0 chrUextra 28028813 28029346 -975310 - R1_DM LINE R1 -3503 1853 1321 1 798 1620 2 0 7 chrUextra 28029446 28029979 -974677 + (TAGA)n Simple_repeat Simple_repeat 1 529 0 1 798 2510 106 19 27 chrUextra 28030079 28030604 -974052 + DMSAT6 Satellite Satellite 1 521 -74 1 798 1076 8 0 0 chrUextra 28030712 28030831 -973825 + 5S_DM RNA RNA 17 135 0 1 798 1231 7 0 0 chrUextra 28031058 28031193 -973463 + 5S_DM RNA RNA 1 135 0 1 798 1620 3 0 0 chrUextra 28031557 28031878 -972778 + (TTGTG)n Simple_repeat Simple_repeat 1 321 0 1 798 4976 2 2 0 chrUextra 28031978 28032511 -972145 - LSU-rRNA_Dme rRNA rRNA -266 3634 3101 1 798 2707 168 8 6 chrUextra 28032611 28033144 -971512 - SAR_DM Satellite Satellite -539 933 400 1 798 355 7 0 158 chrUextra 28033247 28033430 -971226 + (CAAAG)n Simple_repeat Simple_repeat 2 155 0 1 798 3800 2 0 56 chrUextra 28033947 28034408 -970248 + LSU-rRNA_Dme rRNA rRNA 1 435 -3465 1 798 4734 13 0 2 chrUextra 28035772 28036304 -968352 - FW_DM LINE Jockey -1787 2905 2375 1 798 2839 62 28 2 chrUextra 28036405 28036936 -967720 + DMSAT6 Satellite Satellite 1 544 0 1 798 1731 270 0 0 chrUextra 28037070 28037562 -967094 + Copia_I LTR Copia 1599 2090 -2503 1 798 4903 2 2 0 chrUextra 28037668 28038199 -966457 + LSU-rRNA_Dme rRNA rRNA 735 1266 -2634 1 798 3921 52 20 2 chrUextra 28038332 28038832 -965824 + R1_DM LINE R1 622 1130 -4226 1 798 961 8 0 0 chrUextra 28039564 28039693 -964963 + FW_DM LINE Jockey 4564 4692 0 1 798 809 62 102 0 chrUextra 28039700 28039828 -964828 + MDG1_I LTR Gypsy 4735 4875 -1721 1 798 1272 7 0 0 chrUextra 28039828 28039973 -964683 + (TAA)n Simple_repeat Simple_repeat 3 147 0 1 798 466 124 185 50 chrUextra 28039973 28040067 -964589 + MDG1_LTR LTR Gypsy 87 201 -241 1 798 267 57 0 0 chrUextra 28040061 28040096 -964560 + FW_DM LINE Jockey 4547 4581 -111 1 798 4780 4 0 0 chrUextra 28040828 28041343 -963313 - LSU-rRNA_Dme rRNA rRNA -746 3154 2640 1 798 4113 57 4 11 chrUextra 28041460 28041992 -962664 - BATUMI_I LTR Pao -4254 3709 3182 1 798 2776 171 6 2 chrUextra 28042095 28042623 -962033 - SAR_DM Satellite Satellite -610 862 333 1 798 2381 98 11 60 chrUextra 28042724 28043256 -961400 + DMSAT6 Satellite Satellite 1 505 0 1 798 1017 0 0 0 chrUextra 28043356 28043469 -961187 + (GAGAA)n Simple_repeat Simple_repeat 4 116 0 1 798 2567 91 23 29 chrUextra 28043987 28044500 -960156 + DMSAT6 Satellite Satellite 1 510 -97 1 798 4631 11 0 0 chrUextra 28044618 28045149 -959507 - CIRCE LINE Composite -1282 5074 4544 1 798 4673 17 2 4 chrUextra 28045249 28045780 -958876 - SSU-rRNA_Dme rRNA rRNA -680 1315 786 1 798 1620 4 0 0 chrUextra 28045882 28046411 -958245 + (TCTA)n Simple_repeat Simple_repeat 1 529 0 1 798 909 18 0 27 chrUextra 28046527 28046639 -958017 - NTS_DM Other Other -107 133 25 1 798 1309 24 0 6 chrUextra 28046691 28046856 -957800 - NTS_DM Other Other -39 201 38 1 798 928 9 0 27 chrUextra 28046856 28046968 -957688 - NTS_DM Other Other -107 133 25 1 798 22 56 0 0 chrUextra 28046994 28047030 -957626 + AT_rich Low_complexity Low_complexity 1 36 0 1 798 2558 169 19 32 chrUextra 28047142 28048302 -956354 + DMSAT6 Satellite Satellite 1 1145 0 1 798 2622 171 9 8 chrUextra 28048404 28048934 -955722 - SAR_DM Satellite Satellite -435 1037 507 1 798 978 9 0 9 chrUextra 28049035 28049147 -955509 - G_DM LINE Jockey -4235 111 1 1 798 249 160 19 39 chrUextra 28049208 28049260 -955396 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 798 254 186 0 0 chrUextra 28049309 28049352 -955304 + LSU-rRNA_Dme rRNA rRNA 2578 2620 -1280 1 799 1071 8 0 15 chrUextra 28049433 28049566 -955090 - G_DM LINE Jockey 0 4346 4216 1 799 4690 2 0 2 chrUextra 28049666 28050197 -954459 + ROO_I LTR Pao 2857 3386 -4870 1 799 1488 39 0 0 chrUextra 28050297 28050630 -954026 + (CTTAT)n Simple_repeat Simple_repeat 1 333 0 1 799 1224 67 0 0 chrUextra 28050645 28050825 -953831 + (CTTAT)n Simple_repeat Simple_repeat 1 180 0 1 799 32 0 0 0 chrUextra 28051045 28051077 -953579 + AT_rich Low_complexity Low_complexity 1 32 0 1 799 28 48 0 0 chrUextra 28051406 28051448 -953208 + AT_rich Low_complexity Low_complexity 1 42 0 1 799 2229 190 30 6 chrUextra 28051562 28052069 -952587 - SAR_DM Satellite Satellite -581 891 373 1 799 4152 41 0 17 chrUextra 28052195 28052721 -951935 - R1_DM LINE R1 -4251 1105 589 1 799 584 61 0 24 chrUextra 28052821 28052905 -951751 - LSU-rRNA_Dme rRNA rRNA -3818 82 1 1 799 21 71 0 0 chrUextra 28052917 28052959 -951697 + AT_rich Low_complexity Low_complexity 1 42 0 1 799 34 24 0 0 chrUextra 28053195 28053236 -951420 + AT_rich Low_complexity Low_complexity 1 41 0 1 799 2749 91 19 10 chrUextra 28053459 28053981 -950675 - DMSAT6 Satellite Satellite 0 527 1 1 799 1224 91 0 4 chrUextra 28054083 28054348 -950308 + (TAGA)n Simple_repeat Simple_repeat 1 264 0 1 799 1059 94 0 0 chrUextra 28054354 28054534 -950122 + (ATCG)n Simple_repeat Simple_repeat 1 180 0 1 799 441 104 0 0 chrUextra 28054534 28054610 -950046 + (TAGA)n Simple_repeat Simple_repeat 3 79 0 1 799 4855 4 0 2 chrUextra 28054713 28055243 -949413 + R1_DM LINE R1 4464 4992 -364 1 799 4911 2 2 0 chrUextra 28055973 28056503 -948153 - SSU-rRNA_Dme rRNA rRNA -1037 958 428 1 799 1620 14 0 0 chrUextra 28056603 28057102 -947554 + (TCTA)n Simple_repeat Simple_repeat 1 499 0 1 799 270 0 0 0 chrUextra 28057103 28057133 -947523 + (CTAG)n Simple_repeat Simple_repeat 3 32 0 1 799 2673 84 11 25 chrUextra 28057233 28057760 -946896 + DMSAT6 Satellite Satellite 1 519 -251 1 799 2375 89 35 35 chrUextra 28057863 28058390 -946266 - DMSAT6 Satellite Satellite -24 526 1 1 799 2500 72 2 51 chrUextra 28059763 28060250 -944406 - DMSAT6 Satellite Satellite -3 467 5 1 799 1388 6 0 18 chrUextra 28060395 28060560 -944096 - NTS_DM Other Other -78 162 1 1 799 1969 4 17 13 chrUextra 28060560 28060799 -943857 - NTS_DM Other Other 0 240 1 1 799 794 9 35 26 chrUextra 28060799 28060913 -943743 - NTS_DM Other Other 0 240 126 1 799 980 22 0 82 chrUextra 28061013 28061207 -943449 + (GAGAA)n Simple_repeat Simple_repeat 1 178 0 1 799 396 184 11 54 chrUextra 28061207 28061236 -943420 + polypurine Low_complexity Low_complexity 1 30 0 1 799 824 23 0 83 chrUextra 28061236 28061428 -943228 + (GAGAA)n Simple_repeat Simple_repeat 3 178 0 1 799 396 184 11 54 chrUextra 28061428 28061490 -943166 + polypurine Low_complexity Low_complexity 31 88 0 1 799 444 19 0 0 chrUextra 28061490 28061543 -943113 + (ATAAG)n Simple_repeat Simple_repeat 1 53 0 1 799 2522 108 10 64 chrUextra 28061650 28062147 -942509 + DMSAT6 Satellite Satellite 1 470 0 1 799 756 77 0 0 chrUextra 28062273 28062390 -942266 + (GAGAA)n Simple_repeat Simple_repeat 1 117 0 1 799 1521 34 0 5 chrUextra 28062390 28062803 -941853 + (TATAA)n Simple_repeat Simple_repeat 1 411 0 1 799 1160 167 17 7 chrUextra 28063533 28063580 -941076 + SAR_DM Satellite Satellite 1 60 -1014 1 799 922 51 0 0 chrUextra 28063580 28063697 -940959 - ARS406_DM Unknown Unknown -164 189 73 1 799 1160 167 17 7 chrUextra 28063697 28064063 -940593 + SAR_DM Satellite Satellite 61 535 -539 1 799 2205 28 225 0 chrUextra 28064337 28064693 -939963 + FW_DM LINE Jockey 3120 3555 -1137 1 799 4925 0 2 2 chrUextra 28064793 28065323 -939333 - LSU-rRNA_Dme rRNA rRNA -368 3532 3003 1 799 716 0 0 0 chrUextra 28065423 28065499 -939157 - NTS_DM Other Other -164 76 1 1 799 1866 21 17 17 chrUextra 28065499 28065739 -938917 - NTS_DM Other Other 0 240 1 1 799 1529 29 19 19 chrUextra 28065740 28065948 -938708 - NTS_DM Other Other -1 239 32 1 799 251 164 115 0 chrUextra 28066095 28066156 -938500 + PROTOP DNA P 848 915 -3565 1 799 464 176 390 5 chrUextra 28066155 28066365 -938291 + PROTOP DNA P 3959 4248 -232 1 799 279 277 28 16 chrUextra 28066451 28066579 -938077 - MICROPIA_I LTR Gypsy -626 3850 3774 1 799 804 50 0 0 chrUextra 28066682 28066782 -937874 + HETA LINE telomeric 2067 2166 -3915 1 799 3076 102 16 0 chrUextra 28066780 28067211 -937445 + HETA LINE telomeric 2429 2866 -3215 1 799 4840 0 0 2 chrUextra 28067940 28068469 -936187 + LSU-rRNA_Dme rRNA rRNA 599 1126 -2774 1 799 4379 14 0 0 chrUextra 28068569 28069051 -935605 - LSU-rRNA_Dme rRNA rRNA -1631 2269 1788 1 799 4774 6 2 2 chrUextra 28069198 28069727 -934929 - LSU-rRNA_Dme rRNA rRNA -2591 1309 781 1 799 4652 8 4 0 chrUextra 28069827 28070348 -934308 + Invader4_I LTR Gypsy 1499 2021 -392 1 799 833 9 34 26 chrUextra 28070456 28070573 -934083 + NTS_DM Other Other 123 240 0 1 799 1365 12 0 18 chrUextra 28070573 28070738 -933918 + NTS_DM Other Other 1 162 -78 1 799 507 131 36 0 chrUextra 28070848 28070932 -933724 + NTS_DM Other Other 4 90 -150 1 799 343 143 136 0 chrUextra 28071087 28071241 -933415 + (CAGA)n Simple_repeat Simple_repeat 4 178 0 1 799 1627 174 17 10 chrUextra 28071722 28071766 -932890 - SAR_DM Satellite Satellite -426 523 462 1 799 1107 82 0 0 chrUextra 28071766 28071924 -932732 + ARS406_DM Unknown Unknown 1 158 -195 1 799 1627 174 17 10 chrUextra 28071924 28072242 -932414 - SAR_DM Satellite Satellite -426 461 1 1 799 37 23 0 0 chrUextra 28072466 28072510 -932146 + AT_rich Low_complexity Low_complexity 1 44 0 1 799 4733 2 6 6 chrUextra 28072972 28073501 -931155 + LSU-rRNA_Dme rRNA rRNA 1202 1730 -2170 1 799 1503 17 0 0 chrUextra 28073619 28073797 -930859 + (TTCTC)n Simple_repeat Simple_repeat 1 178 0 1 799 1269 46 17 0 chrUextra 28073820 28073993 -930663 + (TTCTC)n Simple_repeat Simple_repeat 5 180 0 1 799 600 107 53 15 chrUextra 28073997 28074130 -930526 + CT-rich Low_complexity Low_complexity 2 139 0 1 799 1986 0 17 13 chrUextra 28074270 28074509 -930147 + NTS_DM Other Other 1 240 0 1 799 1940 8 17 13 chrUextra 28074509 28074747 -929909 + NTS_DM Other Other 1 239 -1 1 799 2461 181 10 33 chrUextra 28074863 28075994 -928662 - DMSAT6 Satellite Satellite -30 1104 1 1 799 2616 79 23 15 chrUextra 28076120 28076646 -928010 + DMSAT6 Satellite Satellite 1 529 -3 1 799 1823 5 0 0 chrUextra 28076748 28076954 -927702 - NTS_DM Other Other -34 206 1 1 799 1926 0 17 21 chrUextra 28076954 28077195 -927461 - NTS_DM Other Other 0 240 1 1 799 563 0 50 38 chrUextra 28077195 28077275 -927381 - NTS_DM Other Other 0 240 160 1 799 388 364 35 6 chrUextra 28077377 28077551 -927105 + GA-rich Low_complexity Low_complexity 1 179 0 1 799 3871 21 0 0 chrUextra 28078003 28078436 -926220 + G2_DM LINE Jockey 860 1292 -1810 1 799 600 56 22 22 chrUextra 28078440 28078531 -926125 - PROTOP DNA P -221 4259 4169 1 799 2488 107 50 8 chrUextra 28078633 28079152 -925504 - DMSAT6 Satellite Satellite -287 541 1 1 799 2597 113 18 26 chrUextra 28079279 28079787 -924869 + DMSAT6 Satellite Satellite 1 503 0 1 799 3487 67 0 23 chrUextra 28079894 28080414 -924242 + NOMAD_I LTR Gypsy 5350 5857 -715 1 799 813 11 0 0 chrUextra 28080515 28080609 -924047 + (TTCTC)n Simple_repeat Simple_repeat 5 98 0 1 799 2629 102 9 32 chrUextra 28081143 28081670 -922986 - DMSAT6 Satellite Satellite -6 514 1 1 799 2498 111 76 40 chrUextra 28081771 28082299 -922357 - STALKER4_I LTR Gypsy -5281 1249 703 1 799 2576 109 18 10 chrUextra 28082399 28082903 -921753 - DMSAT6 Satellite Satellite -287 508 1 1 799 2310 179 11 13 chrUextra 28083027 28083552 -921104 - SAR_DM Satellite Satellite -667 805 282 1 799 2558 71 51 13 chrUextra 28083655 28084183 -920473 - DMSAT6 Satellite Satellite -107 548 1 1 799 4728 6 4 2 chrUextra 28084283 28084811 -919845 + R1_DM LINE R1 3452 3980 -1376 1 799 1620 4 2 2 chrUextra 28084913 28085439 -919217 + (CATCT)n Simple_repeat Simple_repeat 1 526 0 1 799 2573 95 20 20 chrUextra 28085562 28086067 -918589 + DMSAT6 Satellite Satellite 1 505 0 1 799 2271 192 10 13 chrUextra 28086172 28086695 -917961 - SAR_DM Satellite Satellite -425 1047 527 1 799 2547 175 11 8 chrUextra 28086797 28087322 -917334 + SAR_DM Satellite Satellite 278 804 -668 1 799 2549 92 17 44 chrUextra 28087422 28087943 -916713 - DMSAT6 Satellite Satellite -156 506 1 1 799 507 294 51 51 chrUextra 28088756 28088959 -915697 - DM297_I LTR Gypsy -3176 2991 2643 1 799 1609 23 19 0 chrUextra 28088959 28089173 -915483 - TLD2 Unknown Unknown 0 218 1 1 799 507 294 51 51 chrUextra 28089173 28089202 -915454 - DM297_I LTR Gypsy -3176 2642 2590 1 799 396 247 149 57 chrUextra 28089935 28090197 -914459 - QUASIMODO_I LTR Gypsy -1237 4823 4538 1 799 192 40 0 0 chrUextra 28090243 28090268 -914388 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 799 1634 17 0 0 chrUextra 28090277 28090457 -914199 - DMRT1B LINE R1 0 5183 5004 1 799 519 196 0 0 chrUextra 28090565 28090703 -913953 + (AATAG)n Simple_repeat Simple_repeat 2 139 0 1 799 2651 58 75 0 chrUextra 28090707 28090851 -913805 - Stalker3_LTR LTR Gypsy 0 372 229 1 799 210 37 0 0 chrUextra 28090851 28090878 -913778 + (CTTAT)n Simple_repeat Simple_repeat 3 29 0 1 799 2651 58 75 0 chrUextra 28090878 28091079 -913577 - Stalker3_LTR LTR Gypsy -144 228 2 1 799 2495 95 29 8 chrUextra 28091189 28091711 -912945 + DMSAT6 Satellite Satellite 1 533 0 1 799 1553 0 0 6 chrUextra 28091811 28091989 -912667 + (GAGAA)n Simple_repeat Simple_repeat 4 180 0 1 799 2453 117 31 14 chrUextra 28092444 28092963 -911693 + DMSAT6 Satellite Satellite 1 527 -3 1 799 2521 172 8 10 chrUextra 28093069 28093591 -911065 + SAR_DM Satellite Satellite 536 1056 -416 1 799 1620 4 0 0 chrUextra 28093692 28093934 -910722 + (GAGAA)n Simple_repeat Simple_repeat 1 242 0 1 799 204 120 60 0 chrUextra 28094319 28094369 -910287 + CT-rich Low_complexity Low_complexity 5 57 0 1 799 222 105 0 0 chrUextra 28094389 28094427 -910229 + (CGAGA)n Simple_repeat Simple_repeat 3 40 0 1 799 1587 7 0 0 chrUextra 28094428 28094846 -909810 + (GAGAA)n Simple_repeat Simple_repeat 1 418 0 1 799 1494 55 40 30 chrUextra 28094946 28095473 -909183 + (TCTTG)n Simple_repeat Simple_repeat 1 532 0 1 799 1995 166 51 6 chrUextra 28095584 28096095 -908561 + SAR_DM Satellite Satellite 1 534 -677 1 799 666 0 0 0 chrUextra 28096200 28096274 -908382 + (GAGAA)n Simple_repeat Simple_repeat 2 75 0 1 799 2241 174 13 8 chrUextra 28096881 28097351 -907305 + SAR_DM Satellite Satellite 399 870 -602 1 799 605 47 0 12 chrUextra 28097893 28097979 -906677 + (TTCTC)n Simple_repeat Simple_repeat 2 86 0 1 799 979 284 14 36 chrUextra 28098079 28098444 -906212 - ROVER-I_DM LTR Gypsy -5378 1206 850 1 799 1070 50 0 0 chrUextra 28098465 28098605 -906051 - LOOPER1_DM DNA PiggyBac -1529 352 213 1 799 306 0 0 0 chrUextra 28099331 28099365 -905291 + (GAGAA)n Simple_repeat Simple_repeat 2 35 0 1 799 4863 4 2 2 chrUextra 28099957 28100483 -904173 - LSU-rRNA_Dme rRNA rRNA -229 3671 3146 1 799 576 0 49 37 chrUextra 28100583 28100665 -903991 + NTS_DM Other Other 158 240 0 1 799 1388 6 0 18 chrUextra 28100665 28100830 -903826 + NTS_DM Other Other 1 162 -78 1 799 496 162 51 59 chrUextra 28100940 28101058 -903598 + NTS_DM Other Other 4 120 -120 1 799 1881 0 18 13 chrUextra 28101209 28101437 -903219 + NTS_DM Other Other 12 240 0 1 799 1956 0 17 17 chrUextra 28101437 28101677 -902979 + NTS_DM Other Other 1 240 0 1 799 520 17 0 0 chrUextra 28101677 28101735 -902921 + NTS_DM Other Other 1 58 -182 1 799 2395 179 15 11 chrUextra 28102462 28102987 -901669 + SAR_DM Satellite Satellite 268 794 -678 1 799 4138 24 0 6 chrUextra 28103099 28103612 -901044 - NOMAD_I LTR Gypsy -805 5767 5258 1 799 22 111 0 0 chrUextra 28103769 28103868 -900788 + AT_rich Low_complexity Low_complexity 1 99 0 1 799 26 118 0 0 chrUextra 28103950 28104102 -900554 + AT_rich Low_complexity Low_complexity 1 152 0 1 799 1817 0 13 22 chrUextra 28104337 28104563 -900093 - NTS_DM Other Other -16 224 1 1 799 1958 8 17 13 chrUextra 28104563 28104802 -899854 - NTS_DM Other Other 0 240 1 1 799 337 36 68 51 chrUextra 28104802 28104861 -899795 - NTS_DM Other Other 0 240 181 1 799 4441 27 2 2 chrUextra 28104962 28105487 -899169 - TABOR_I LTR Gypsy -2778 3558 3034 1 799 4874 0 2 2 chrUextra 28105587 28106112 -898544 + SSU-rRNA_Dme rRNA rRNA 1468 1992 -3 1 799 2460 187 15 4 chrUextra 28106212 28106732 -897924 + SAR_DM Satellite Satellite 354 879 -593 1 799 513 0 0 0 chrUextra 28106837 28106894 -897762 + (TTCTC)n Simple_repeat Simple_repeat 2 58 0 1 799 1620 5 0 0 chrUextra 28106919 28107362 -897294 + (GAGAA)n Simple_repeat Simple_repeat 1 443 0 1 799 24 53 0 0 chrUextra 28108721 28108759 -895897 + AT_rich Low_complexity Low_complexity 1 38 0 1 799 922 9 0 27 chrUextra 28108785 28108897 -895759 + NTS_DM Other Other 25 133 -107 1 799 1332 18 0 6 chrUextra 28108897 28109062 -895594 + NTS_DM Other Other 38 201 -39 1 799 21 57 0 0 chrUextra 28109062 28109097 -895559 + AT_rich Low_complexity Low_complexity 1 35 0 1 799 890 9 9 27 chrUextra 28109123 28109234 -895422 + NTS_DM Other Other 25 133 -107 1 799 34 24 0 0 chrUextra 28109396 28109437 -895219 + AT_rich Low_complexity Low_complexity 1 41 0 1 799 2713 89 14 24 chrUextra 28109977 28110485 -894171 + DMSAT6 Satellite Satellite 1 502 0 1 799 4338 9 17 2 chrUextra 28111834 28112358 -892298 + MDG1_I LTR Gypsy 859 1390 -5206 1 799 2499 82 23 31 chrUextra 28112461 28112981 -891675 + DMSAT6 Satellite Satellite 1 515 -13 1 799 364 217 106 0 chrUextra 28113157 28113318 -891338 + (CAAGA)n Simple_repeat Simple_repeat 3 180 0 1 799 360 151 125 6 chrUextra 28113370 28113530 -891126 + (CAGA)n Simple_repeat Simple_repeat 2 180 0 1 799 3059 31 0 6 chrUextra 28113706 28114059 -890597 + R1_DM LINE R1 5006 5356 0 1 799 996 73 7 7 chrUextra 28114092 28114230 -890426 + R1_DM LINE R1 1 138 -5218 1 799 4641 2 2 0 chrUextra 28114330 28114854 -889802 + LSU-rRNA_Dme rRNA rRNA 382 906 -2994 1 799 319 141 133 0 chrUextra 28116214 28116349 -888307 + (TTTG)n Simple_repeat Simple_repeat 3 155 0 1 799 540 23 0 137 chrUextra 28116287 28116492 -888164 + T-rich Low_complexity Low_complexity 2 178 0 1 799 230 121 0 147 chrUextra 28116511 28116715 -887941 + T-rich Low_complexity Low_complexity 5 178 0 1 799 4632 8 2 6 chrUextra 28116826 28117349 -887307 - LSU-rRNA_Dme rRNA rRNA -2284 1616 1096 1 799 2303 186 10 15 chrUextra 28118072 28118595 -886061 - SAR_DM Satellite Satellite -470 1002 483 1 799 2045 0 4 0 chrUextra 28118695 28118951 -885705 + HMSBEAGLE_I LTR Gypsy 531 787 -5742 1 799 974 29 52 12 chrUextra 28118965 28119137 -885519 + (TTA)n Simple_repeat Simple_repeat 1 179 0 1 799 725 0 0 0 chrUextra 28119137 28119218 -885438 + HMSBEAGLE_I LTR Gypsy 969 1049 -5480 1 799 4770 4 0 2 chrUextra 28119318 28119841 -884815 - R1_DM LINE R1 -1742 3614 3093 1 799 2448 105 19 18 chrUextra 28119950 28120464 -884192 + DMSAT6 Satellite Satellite 1 514 0 1 799 1620 7 0 0 chrUextra 28121187 28121473 -883183 + (TAGA)n Simple_repeat Simple_repeat 1 286 0 1 799 1620 0 0 0 chrUextra 28121484 28121706 -882950 + (TAGA)n Simple_repeat Simple_repeat 1 222 0 1 799 2600 88 23 19 chrUextra 28121809 28122331 -882325 + DMSAT6 Satellite Satellite 1 523 -85 1 799 4819 0 0 2 chrUextra 28122431 28122953 -881703 + DOC LINE Jockey 3171 3691 -1034 1 799 794 109 13 0 chrUextra 28123053 28123076 -881580 + (ACTAG)n Simple_repeat Simple_repeat 3 25 0 1 799 1041 96 0 0 chrUextra 28123076 28123254 -881402 + (CAAGA)n Simple_repeat Simple_repeat 3 180 0 1 799 794 109 13 0 chrUextra 28123254 28123386 -881270 + (ACTAG)n Simple_repeat Simple_repeat 4 137 0 1 799 1041 96 0 0 chrUextra 28123386 28123564 -881092 + (CAAGA)n Simple_repeat Simple_repeat 3 180 0 1 799 1345 22 0 37 chrUextra 28123691 28123878 -880778 + (C)n Simple_repeat Simple_repeat 1 180 0 1 799 1389 24 0 0 chrUextra 28123894 28124063 -880593 + (C)n Simple_repeat Simple_repeat 1 169 0 1 799 441 33 0 126 chrUextra 28124071 28124174 -880482 + C-rich Low_complexity Low_complexity 1 90 0 1 799 288 0 0 0 chrUextra 28124380 28124412 -880244 - Stalker3_LTR LTR Gypsy -340 32 1 1 799 3369 44 0 0 chrUextra 28124412 28124819 -879837 - ROO_I LTR Pao -5206 3050 2644 1 799 1063 102 11 6 chrUextra 28124919 28125096 -879560 + (TATTG)n Simple_repeat Simple_repeat 2 179 0 1 799 1432 14 0 38 chrUextra 28125096 28125385 -879271 + (TTATA)n Simple_repeat Simple_repeat 1 278 0 1 799 387 60 0 0 chrUextra 28125391 28125441 -879215 + (TATTG)n Simple_repeat Simple_repeat 3 52 0 1 799 1520 10 0 21 chrUextra 28126163 28126685 -877971 + (TCTA)n Simple_repeat Simple_repeat 1 510 0 1 799 2200 231 10 6 chrUextra 28126787 28127288 -877368 + IDEFIX_I LTR Gypsy 1611 2113 -3515 1 799 2526 115 12 15 chrUextra 28127407 28127929 -876727 - DMSAT6 Satellite Satellite -9 520 1 1 799 669 0 0 0 chrUextra 28128650 28128721 -875935 - NTS_DM Other Other -169 71 1 1 799 1945 4 17 17 chrUextra 28128721 28128961 -875695 - NTS_DM Other Other 0 240 1 1 799 1535 29 19 19 chrUextra 28128961 28129171 -875485 - NTS_DM Other Other 0 240 31 1 799 2148 169 31 23 chrUextra 28129277 28129792 -874864 + SAR_DM Satellite Satellite 456 974 -498 1 799 1551 6 0 0 chrUextra 28130519 28130695 -873961 + (TCTTG)n Simple_repeat Simple_repeat 4 179 0 1 799 2367 91 19 39 chrUextra 28131134 28131648 -873008 - DMSAT6 Satellite Satellite -406 503 1 1 799 386 0 0 164 chrUextra 28132042 28132256 -872400 + (ACATG)n Simple_repeat Simple_repeat 2 180 0 1 799 408 121 9 114 chrUextra 28133616 28134065 -870591 + GA-rich Low_complexity Low_complexity 1 401 0 1 799 4714 11 0 2 chrUextra 28134236 28134756 -869900 - LSU-rRNA_Dme rRNA rRNA -1136 2764 2246 1 799 1599 28 0 0 chrUextra 28136107 28136616 -868040 + (TTATA)n Simple_repeat Simple_repeat 1 509 0 1 799 1248 51 14 11 chrUextra 28136942 28137224 -867432 + (TTCTC)n Simple_repeat Simple_repeat 1 282 0 1 799 2227 100 31 56 chrUextra 28137336 28137856 -866800 + DMSAT6 Satellite Satellite 1 507 0 1 799 1620 0 0 0 chrUextra 28137961 28138210 -866446 + (TTGTG)n Simple_repeat Simple_repeat 1 249 0 1 799 2414 8 0 0 chrUextra 28138210 28138476 -866180 + STALKER4_LTR LTR Gypsy 4 269 -133 1 799 58 15 0 0 chrUextra 28139274 28139339 -865317 + AT_rich Low_complexity Low_complexity 1 65 0 1 799 28 48 0 0 chrUextra 28139831 28139873 -864783 + AT_rich Low_complexity Low_complexity 1 42 0 1 799 532 119 36 0 chrUextra 28140146 28140230 -864426 - NTS_DM Other Other -150 90 4 1 799 230 189 66 26 chrUextra 28140251 28140327 -864329 - NTS_DM Other Other -17 223 145 1 799 888 10 0 0 chrUextra 28140436 28140537 -864119 + (CAATA)n Simple_repeat Simple_repeat 4 104 0 1 799 532 119 36 0 chrUextra 28141104 28141188 -863468 - NTS_DM Other Other -150 90 4 1 799 1388 6 0 18 chrUextra 28141298 28141463 -863193 - NTS_DM Other Other -78 162 1 1 799 777 9 36 27 chrUextra 28141464 28141575 -863081 - NTS_DM Other Other -1 239 128 1 799 2196 122 25 27 chrUextra 28141675 28142190 -862466 - DMSAT6 Satellite Satellite -118 514 1 1 799 1620 0 0 0 chrUextra 28142520 28142809 -861847 + (CAAGA)n Simple_repeat Simple_repeat 1 289 0 1 799 655 20 39 39 chrUextra 28142913 28143015 -861641 + NTS_DM Other Other 139 240 0 1 799 1858 21 17 17 chrUextra 28143015 28143255 -861401 + NTS_DM Other Other 1 240 0 1 799 1373 45 0 6 chrUextra 28143255 28143432 -861224 + NTS_DM Other Other 1 176 -64 1 799 438 36 0 0 chrUextra 28144151 28144207 -860449 + (TTCTC)n Simple_repeat Simple_repeat 2 57 0 1 799 1371 48 0 0 chrUextra 28144770 28144979 -859677 + (TAGA)n Simple_repeat Simple_repeat 1 209 0 1 799 1470 57 0 0 chrUextra 28145004 28145287 -859369 + (TAGA)n Simple_repeat Simple_repeat 1 283 0 1 799 1824 21 17 17 chrUextra 28146008 28146245 -858411 + NTS_DM Other Other 4 240 0 1 799 1975 4 17 13 chrUextra 28146245 28146484 -858172 + NTS_DM Other Other 1 240 0 1 799 386 23 0 0 chrUextra 28146484 28146527 -858129 + NTS_DM Other Other 1 43 -197 1 799 21 95 0 0 chrUextra 28146876 28146939 -857717 + AT_rich Low_complexity Low_complexity 1 63 0 1 799 1782 5 0 0 chrUextra 28146951 28147146 -857510 + LSU-rRNA_Dme rRNA rRNA 1 195 -3705 1 799 4190 0 0 0 chrUextra 28147246 28147723 -856933 + ROO_I LTR Pao 100 576 -7680 1 799 270 0 0 0 chrUextra 28147723 28147753 -856903 + (A)n Simple_repeat Simple_repeat 1 30 0 1 799 2322 176 16 12 chrUextra 28147865 28148382 -856274 + SAR_DM Satellite Satellite 467 985 -487 1 799 1757 45 18 5 chrUextra 28148484 28148706 -855950 + ACCORD2_I LTR Gypsy 5835 6059 -1153 1 799 1196 30 0 0 chrUextra 28148732 28148867 -855789 + ACCORD2_I LTR Gypsy 7077 7211 -1 1 799 1112 30 0 29 chrUextra 28148865 28149003 -855653 + ACCORD2_LTR LTR Gypsy 1 134 -81 1 799 1329 13 0 0 chrUextra 28149107 28149262 -855394 + (GAGAA)n Simple_repeat Simple_repeat 3 157 0 1 799 2331 170 16 18 chrUextra 28149725 28150240 -854416 + SAR_DM Satellite Satellite 481 994 -478 1 799 2322 93 21 60 chrUextra 28150342 28150860 -853796 + DMSAT6 Satellite Satellite 1 497 -147 1 799 2644 164 12 8 chrUextra 28150960 28151478 -853178 - SAR_DM Satellite Satellite -554 918 399 1 799 702 290 34 31 chrUextra 28151620 28151767 -852889 - Gypsy4_I LTR Gypsy -3176 2991 2712 1 799 1569 28 24 0 chrUextra 28151767 28151980 -852676 - TLD2 Unknown Unknown 0 218 1 1 799 702 290 34 31 chrUextra 28151980 28152078 -852578 - Gypsy4_I LTR Gypsy -3176 2711 2521 1 799 4393 21 0 4 chrUextra 28152198 28152717 -851939 + STALKER4_I LTR Gypsy 2295 2811 -3719 1 799 433 60 0 138 chrUextra 28152817 28153101 -851555 + T-rich Low_complexity Low_complexity 1 244 0 1 799 531 28 0 137 chrUextra 28153128 28153333 -851323 + T-rich Low_complexity Low_complexity 4 180 0 1 799 1547 0 0 0 chrUextra 28153438 28153604 -851052 - TABOR_LTR LTR Gypsy -340 166 1 1 799 1824 72 2 31 chrUextra 28153602 28153953 -850703 - TABOR_I LTR Gypsy 0 6336 5877 1 799 1339 18 0 6 chrUextra 28154053 28154218 -850438 - NTS_DM Other Other -39 201 38 1 799 890 9 9 27 chrUextra 28154218 28154329 -850327 - NTS_DM Other Other -107 133 25 1 799 21 57 0 0 chrUextra 28154355 28154390 -850266 + AT_rich Low_complexity Low_complexity 1 35 0 1 799 1309 24 0 6 chrUextra 28154390 28154555 -850101 - NTS_DM Other Other -39 201 38 1 799 298 194 0 15 chrUextra 28154671 28154739 -849917 - HETA LINE telomeric -386 5695 5629 1 799 297 70 35 17 chrUextra 28154739 28154797 -849859 + (TATG)n Simple_repeat Simple_repeat 2 60 0 1 799 338 220 72 18 chrUextra 28154810 28154915 -849741 - Gypsy_LTR LTR Gypsy -20 462 352 1 799 1387 124 33 52 chrUextra 28154915 28155189 -849467 - Stalker2_LTR LTR Gypsy -3 421 171 1 799 4480 12 2 8 chrUextra 28155289 28155807 -848849 + DOC2_DM LINE Jockey 2992 3506 -1287 1 799 2368 122 23 34 chrUextra 28155931 28156406 -848250 - DMSAT6 Satellite Satellite 0 470 1 1 799 3310 21 5 3 chrUextra 28156525 28157043 -847613 + DM297_I LTR Gypsy 968 1402 -4765 1 799 1620 5 0 2 chrUextra 28157143 28157574 -847082 + (CTATT)n Simple_repeat Simple_repeat 1 430 0 1 799 582 28 0 0 chrUextra 28157586 28157658 -846998 + (CTATT)n Simple_repeat Simple_repeat 3 74 0 1 799 266 196 0 19 chrUextra 28157841 28157893 -846763 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 799 266 196 0 19 chrUextra 28157933 28157985 -846671 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 799 277 176 0 19 chrUextra 28158016 28158068 -846588 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 799 22 56 0 0 chrUextra 28158081 28158117 -846539 + AT_rich Low_complexity Low_complexity 1 36 0 1 799 928 9 0 27 chrUextra 28158143 28158255 -846401 + NTS_DM Other Other 25 133 -107 1 799 4559 16 0 2 chrUextra 28158380 28158897 -845759 - R1_DM LINE R1 -208 5148 4633 1 799 4497 4 2 10 chrUextra 28158997 28159515 -845141 - NOMAD_I LTR Gypsy -399 6173 5660 1 799 675 115 0 0 chrUextra 28159615 28159745 -844911 + (TCTA)n Simple_repeat Simple_repeat 3 132 0 1 799 1401 45 0 0 chrUextra 28159763 28160128 -844528 + (TCTA)n Simple_repeat Simple_repeat 1 365 0 1 799 412 59 0 0 chrUextra 28160233 28160284 -844372 + NINJA_I LTR Pao 3928 3978 -2033 1 799 2651 88 8 68 chrUextra 28160861 28161361 -843295 + DMSAT6 Satellite Satellite 1 470 0 1 799 1893 167 8 11 chrUextra 28161469 28161506 -843150 + SAR_DM Satellite Satellite 1 45 -1028 1 799 818 30 0 10 chrUextra 28161506 28161607 -843049 - ARS406_DM Unknown Unknown -164 189 90 1 799 1893 167 8 11 chrUextra 28161607 28161987 -842669 + SAR_DM Satellite Satellite 46 515 -558 1 799 266 196 0 19 chrUextra 28162110 28162162 -842494 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 799 266 196 0 19 chrUextra 28162202 28162254 -842402 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 799 2099 32 4 0 chrUextra 28162357 28162605 -842051 - LSU-rRNA_Dme rRNA rRNA 0 3900 3652 1 799 1647 34 0 10 chrUextra 28162709 28162917 -841739 - NTS_DM Other Other -34 206 1 1 799 1849 25 17 17 chrUextra 28162917 28163157 -841499 - NTS_DM Other Other 0 240 1 1 799 377 63 61 45 chrUextra 28163157 28163223 -841433 - NTS_DM Other Other 0 240 174 1 799 4778 2 0 2 chrUextra 28163323 28163841 -840815 + LSU-rRNA_Dme rRNA rRNA 2024 2540 -1360 1 799 4548 4 6 6 chrUextra 28163941 28164456 -840200 + LSU-rRNA_Dme rRNA rRNA 1277 1791 -2109 1 799 1620 5 0 0 chrUextra 28164666 28165075 -839581 + (TTCTC)n Simple_repeat Simple_repeat 1 409 0 1 799 2555 161 4 16 chrUextra 28165175 28165692 -838964 - SAR_DM Satellite Satellite -620 852 342 1 799 2623 96 14 49 chrUextra 28165794 28166309 -838347 + DMSAT6 Satellite Satellite 1 496 -357 1 799 2499 90 20 14 chrUextra 28166418 28166926 -837730 - DMSAT6 Satellite Satellite -7 510 1 1 799 464 52 0 0 chrUextra 28167026 28167084 -837572 - STALKER4_LTR LTR Gypsy -336 66 9 1 799 3041 72 11 5 chrUextra 28167094 28167542 -837114 - STALKER4_I LTR Gypsy 0 6530 6080 1 799 4687 6 2 4 chrUextra 28168260 28168777 -835879 + SSU-rRNA_Dme rRNA rRNA 871 1386 -609 1 799 234 179 0 0 chrUextra 28168882 28168938 -835718 + (CATAA)n Simple_repeat Simple_repeat 2 57 0 1 799 3023 89 32 2 chrUextra 28169494 28170010 -834646 + STALKER4_I LTR Gypsy 4902 5830 -1067 1 799 1187 95 77 41 chrUextra 28171343 28171563 -833093 + ACCORD2_I LTR Gypsy 1643 1870 -5342 1 799 2114 12 4 8 chrUextra 28171573 28171826 -832830 - IDEFIX_LTR LTR Gypsy 0 594 343 1 799 236 132 0 0 chrUextra 28171820 28171858 -832798 - IDEFIX_I LTR Gypsy -334 5294 5257 1 799 1578 7 0 0 chrUextra 28172183 28172475 -832181 + (TTGTG)n Simple_repeat Simple_repeat 1 292 0 1 799 1472 15 25 20 chrUextra 28172575 28172774 -831882 + NTS_DM Other Other 41 240 0 1 799 1880 17 17 17 chrUextra 28172774 28173014 -831642 + NTS_DM Other Other 1 240 0 1 799 708 13 0 0 chrUextra 28173014 28173091 -831565 + NTS_DM Other Other 1 77 -163 1 799 460 303 0 6 chrUextra 28173262 28173492 -831164 + (CAGAGA)n Simple_repeat Simple_repeat 1 228 0 1 799 388 223 16 74 chrUextra 28173516 28173705 -830951 + GA-rich Low_complexity Low_complexity 1 178 0 1 799 1342 46 0 8 chrUextra 28173807 28174200 -830456 + (CACAA)n Simple_repeat Simple_repeat 1 389 0 1 799 989 50 0 0 chrUextra 28174203 28174323 -830333 - T412LTR LTR LTR 0 481 362 1 799 2526 175 14 53 chrUextra 28174423 28175555 -829101 + DMSAT6 Satellite Satellite 1 1087 0 1 799 2516 93 8 83 chrUextra 28175667 28176171 -828485 - DMSAT6 Satellite Satellite 0 470 5 1 799 4576 6 2 4 chrUextra 28176271 28176787 -827869 - R1_DM LINE R1 -1442 3914 3400 1 799 1332 18 0 6 chrUextra 28176951 28177116 -827540 - NTS_DM Other Other -39 201 38 1 799 928 9 0 27 chrUextra 28177116 28177228 -827428 - NTS_DM Other Other -107 133 25 1 799 22 56 0 0 chrUextra 28177254 28177290 -827366 + AT_rich Low_complexity Low_complexity 1 36 0 1 799 247 176 0 38 chrUextra 28177303 28177356 -827300 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 799 1646 26 0 0 chrUextra 28177503 28177698 -826958 - FW_DM LINE Jockey -1430 3262 3068 1 799 2536 0 0 7 chrUextra 28177718 28178019 -826637 - DOC LINE Jockey 0 4725 4427 1 799 2509 108 14 45 chrUextra 28178126 28178611 -826045 + DMSAT6 Satellite Satellite 1 470 0 1 799 247 53 87 87 chrUextra 28178774 28178865 -825791 + (TCGTG)n Simple_repeat Simple_repeat 1 92 0 1 799 1207 33 0 32 chrUextra 28178865 28179051 -825605 + (TCTTG)n Simple_repeat Simple_repeat 1 180 0 1 799 247 53 87 87 chrUextra 28179051 28179062 -825594 + (TCGTG)n Simple_repeat Simple_repeat 5 15 0 1 799 956 111 0 6 chrUextra 28179062 28179243 -825413 + (CATGT)n Simple_repeat Simple_repeat 1 180 0 1 799 2722 80 231 51 chrUextra 28179351 28179867 -824789 + DOC LINE Jockey 1886 2494 -2231 1 799 630 160 0 0 chrUextra 28179967 28180136 -824520 + (CA)n Simple_repeat Simple_repeat 2 170 0 1 99 2898 0 0 3 chrUextra 28180166 28180483 -824173 - STALKER4_LTR LTR Gypsy 0 402 87 1 800 4221 0 2 48 chrUextra 28180583 28181099 -823557 + LSU-rRNA_Dme rRNA rRNA 157 648 -3252 1 800 4437 8 0 6 chrUextra 28181199 28181715 -822941 + ROO_I LTR Pao 894 1406 -6850 1 800 2357 100 23 47 chrUextra 28181815 28182329 -822327 - DMSAT6 Satellite Satellite -122 502 1 1 800 4698 4 0 2 chrUextra 28182431 28182947 -821709 - R1_DM LINE R1 -308 5048 4534 1 800 2834 84 14 8 chrUextra 28183047 28183562 -821094 + DMSAT6 Satellite Satellite 1 517 0 1 800 2549 163 18 6 chrUextra 28183670 28184176 -820480 + SAR_DM Satellite Satellite 326 837 -635 1 800 1089 0 0 0 chrUextra 28184892 28185013 -819643 + (CACAA)n Simple_repeat Simple_repeat 2 122 0 1 800 3420 33 0 0 chrUextra 28185013 28185407 -819249 - MAX_I LTR Pao -3340 4574 4181 1 800 536 161 0 0 chrUextra 28185507 28185594 -819062 - IDEFIX_I LTR Gypsy -1322 4306 4220 1 800 3729 12 2 9 chrUextra 28185598 28186022 -818634 + Gypsy12_LTR LTR Gypsy 1 421 -1915 1 800 2386 101 27 40 chrUextra 28186144 28186619 -818037 + DMSAT6 Satellite Satellite 2 470 0 1 800 2488 82 14 54 chrUextra 28186737 28187252 -817404 + DMSAT6 Satellite Satellite 1 493 -108 1 800 702 0 0 0 chrUextra 28187352 28187430 -817226 + (GAGAA)n Simple_repeat Simple_repeat 2 79 0 1 800 2439 126 16 10 chrUextra 28187967 28188482 -816174 - DMSAT6 Satellite Satellite -15 517 1 1 800 4585 2 2 0 chrUextra 28188582 28189097 -815559 - ROO_I LTR Pao -5063 3193 2678 1 800 4761 6 2 0 chrUextra 28189197 28189711 -814945 + LSU-rRNA_Dme rRNA rRNA 3145 3659 -241 1 800 370 6 0 164 chrUextra 28189845 28190111 -814545 + (TTATG)n Simple_repeat Simple_repeat 1 222 0 1 800 2575 113 19 9 chrUextra 28190455 28190920 -813736 + DMSAT6 Satellite Satellite 1 470 0 1 800 507 201 31 63 chrUextra 28191039 28191349 -813307 + PROTOP_B DNA P 350 689 -464 1 800 1620 2 0 4 chrUextra 28191653 28192158 -812498 + (TAGA)n Simple_repeat Simple_repeat 1 502 0 1 800 2338 113 12 37 chrUextra 28192267 28192781 -811875 + DMSAT6 Satellite Satellite 1 500 -85 1 800 4713 2 2 4 chrUextra 28192881 28193395 -811261 + LSU-rRNA_Dme rRNA rRNA 3179 3691 -209 1 800 3108 32 50 0 chrUextra 28193495 28193873 -810783 - PROTOP_A DNA P -708 397 1 1 800 1620 0 0 0 chrUextra 28194109 28194391 -810265 + (TCTTG)n Simple_repeat Simple_repeat 1 282 0 1 800 1898 45 11 11 chrUextra 28194723 28194992 -809664 + STALKER4_I LTR Gypsy 6262 6530 0 1 800 2134 29 0 0 chrUextra 28194993 28195237 -809419 + STALKER4_LTR LTR Gypsy 2 245 -157 1 800 866 123 8 6 chrUextra 28195951 28196464 -808192 + (TA)n Simple_repeat Simple_repeat 1 514 0 1 800 1488 28 0 10 chrUextra 28196568 28197077 -807579 + (TCTA)n Simple_repeat Simple_repeat 1 504 0 1 800 2839 66 28 2 chrUextra 28197804 28198305 -806351 + DMSAT6 Satellite Satellite 1 513 0 1 800 972 65 6 19 chrUextra 28198409 28198918 -805738 - RSP Satellite Satellite -45 502 1 1 800 2491 98 19 43 chrUextra 28199035 28199504 -805152 + DMSAT6 Satellite Satellite 10 467 -3 1 800 1687 40 17 17 chrUextra 28199631 28199861 -804795 - NTS_DM Other Other -10 230 1 1 800 1425 30 19 29 chrUextra 28199861 28200066 -804590 - NTS_DM Other Other 0 240 38 1 800 628 26 0 0 chrUextra 28200066 28200144 -804512 - NTS_DM Other Other -107 133 56 1 800 392 218 100 0 chrUextra 28200256 28200707 -803949 + (TCTTG)n Simple_repeat Simple_repeat 1 496 0 1 800 781 19 0 19 chrUextra 28201470 28201575 -803081 + (TATCG)n Simple_repeat Simple_repeat 2 104 0 1 800 1076 22 0 7 chrUextra 28201600 28201736 -802920 + (ATCTG)n Simple_repeat Simple_repeat 1 135 0 1 800 1428 28 0 0 chrUextra 28201736 28201913 -802743 + (CTTAT)n Simple_repeat Simple_repeat 4 180 0 1 800 3694 44 2 61 chrUextra 28202696 28203201 -801455 + BATUMI_I LTR Pao 2293 2767 -5196 1 800 848 10 0 0 chrUextra 28203311 28203407 -801249 - NTS_DM Other Other -107 133 38 1 800 869 19 9 27 chrUextra 28203407 28203518 -801138 - NTS_DM Other Other -107 133 25 1 800 21 57 0 0 chrUextra 28203544 28203579 -801077 + AT_rich Low_complexity Low_complexity 1 35 0 1 800 1332 18 0 6 chrUextra 28203579 28203744 -800912 - NTS_DM Other Other -39 201 38 1 800 643 13 0 0 chrUextra 28203744 28203822 -800834 - NTS_DM Other Other -107 133 56 1 800 1599 4 0 2 chrUextra 28203922 28204435 -800221 + (TAGA)n Simple_repeat Simple_repeat 1 512 0 1 800 568 48 0 12 chrUextra 28204535 28204620 -800036 + NTS_DM Other Other 118 201 -39 1 800 21 57 0 0 chrUextra 28204620 28204655 -800001 + AT_rich Low_complexity Low_complexity 1 35 0 1 800 802 46 9 27 chrUextra 28204681 28204792 -799864 + NTS_DM Other Other 25 133 -107 1 800 780 42 0 0 chrUextra 28204792 28204888 -799768 + NTS_DM Other Other 38 133 -107 1 800 1136 63 0 6 chrUextra 28204888 28205048 -799608 + NTS_DM Other Other 38 196 -44 1 800 4414 25 0 4 chrUextra 28205149 28205660 -798996 + FW_DM LINE Jockey 3141 3649 -1043 1 800 399 21 0 0 chrUextra 28206224 28206272 -798384 + (GAGAA)n Simple_repeat Simple_repeat 3 50 0 1 800 4698 8 0 0 chrUextra 28206372 28206884 -797772 + R1_DM LINE R1 4332 4843 -513 1 800 34 24 0 0 chrUextra 28207214 28207255 -797401 + AT_rich Low_complexity Low_complexity 1 41 0 1 800 202 265 0 0 chrUextra 28207627 28207676 -796980 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 800 2467 111 12 40 chrUextra 28208220 28208720 -795936 - DMSAT6 Satellite Satellite -14 485 1 1 800 1707 30 8 41 chrUextra 28208823 28209067 -795589 + Copia2_I LTR Copia 3927 4162 0 1 800 1789 5 0 0 chrUextra 28209067 28209265 -795391 + Copia2_LTR_DM LTR Copia 1 198 0 1 800 350 21 0 0 chrUextra 28209285 28209332 -795324 + Gypsy5_LTR LTR Gypsy 1 47 -383 1 800 1167 8 0 0 chrUextra 28209432 28209566 -795090 - Copia_LTR LTR Copia -142 134 1 1 800 2468 18 0 11 chrUextra 28209566 28209850 -794806 - PROTOP_A DNA P -824 281 1 1 800 354 24 0 0 chrUextra 28209850 28209892 -794764 + NINJA_I LTR Pao 5970 6011 0 1 800 316 0 0 135 chrUextra 28209892 28209944 -794712 + NINJA_LTR LTR Pao 1 45 -272 1 800 2344 124 11 25 chrUextra 28210080 28210550 -794106 + DMSAT6 Satellite Satellite 5 467 -3 1 800 3028 18 0 3 chrUextra 28210656 28211000 -793656 - LSU-rRNA_Dme rRNA rRNA -918 2982 2640 1 800 1522 18 0 0 chrUextra 28210998 28211168 -793488 - R1_DM LINE R1 0 5356 5187 1 800 2931 14 82 0 chrUextra 28211268 28211780 -792876 - QUASIMODO_I LTR Gypsy -4062 1998 1445 1 800 1833 10 0 0 chrUextra 28212492 28212691 -791965 - LSU-rRNA_Dme rRNA rRNA -1124 2776 2578 1 800 2907 3 0 0 chrUextra 28212690 28213004 -791652 - R2_DM LINE R2 0 3607 3294 1 800 2627 89 16 20 chrUextra 28213109 28213613 -791043 + DMSAT6 Satellite Satellite 1 502 0 1 800 1599 2 0 2 chrUextra 28213716 28214162 -790494 + (CACAA)n Simple_repeat Simple_repeat 1 445 0 1 800 546 30 15 0 chrUextra 28214162 28214228 -790428 - DMRT1B LINE R1 -139 5044 4978 1 800 4759 0 4 0 chrUextra 28214328 28214840 -789816 + SSU-rRNA_Dme rRNA rRNA 1481 1994 -1 1 800 678 30 0 19 chrUextra 28214940 28215043 -789613 + NTS_DM Other Other 101 201 -39 1 800 863 37 0 27 chrUextra 28215095 28215207 -789449 + NTS_DM Other Other 25 133 -107 1 800 1238 49 0 6 chrUextra 28215207 28215372 -789284 + NTS_DM Other Other 38 201 -39 1 800 1470 31 3 0 chrUextra 28215551 28215908 -788748 + (CTTAT)n Simple_repeat Simple_repeat 1 357 0 1 800 1137 15 0 0 chrUextra 28215931 28216062 -788594 + (TTTTC)n Simple_repeat Simple_repeat 1 131 0 1 800 21 95 0 0 chrUextra 28216345 28216408 -788248 + AT_rich Low_complexity Low_complexity 1 63 0 1 800 2042 5 0 0 chrUextra 28216420 28216642 -788014 + LSU-rRNA_Dme rRNA rRNA 1 222 -3678 1 800 1277 83 112 51 chrUextra 28216773 28217031 -787625 + DM176_LTR LTR Gypsy 221 480 -27 1 800 1770 19 335 3 chrUextra 28217031 28217279 -787377 + DM176_I LTR Gypsy 1 330 -6090 1 800 2817 96 8 10 chrUextra 28217399 28217895 -786761 + DMSAT6 Satellite Satellite 1 495 -3 1 800 2539 164 12 10 chrUextra 28217995 28218505 -786151 + SAR_DM Satellite Satellite 348 858 -614 1 800 4520 21 2 0 chrUextra 28218606 28219117 -785539 - R1_DM LINE R1 -79 5277 4766 1 800 4611 2 2 6 chrUextra 28219219 28219728 -784928 - SSU-rRNA_Dme rRNA rRNA -637 1358 852 1 800 228 224 0 0 chrUextra 28219832 28219899 -784757 + (TTTG)n Simple_repeat Simple_repeat 4 70 0 1 800 664 0 0 116 chrUextra 28219901 28220100 -784556 + (TTGTG)n Simple_repeat Simple_repeat 5 180 0 1 800 1517 17 0 6 chrUextra 28220111 28220292 -784364 + (TTGTG)n Simple_repeat Simple_repeat 1 180 0 1 800 300 91 0 0 chrUextra 28220292 28220335 -784321 + (CGTTG)n Simple_repeat Simple_repeat 1 44 0 1 800 405 0 0 0 chrUextra 28221049 28221094 -783562 + (GAGAA)n Simple_repeat Simple_repeat 2 46 0 1 800 764 318 34 41 chrUextra 28221677 28222094 -782562 + Gypsy_DS LTR Gypsy 2994 3703 -2826 1 800 1171 19 25 6 chrUextra 28222006 28222169 -782487 + TLD2 Unknown Unknown 1 166 -52 1 800 2508 93 10 24 chrUextra 28222269 28222779 -781877 - DMSAT6 Satellite Satellite -120 502 1 1 800 1620 17 0 0 chrUextra 28222879 28223299 -781357 + (TTCTC)n Simple_repeat Simple_repeat 1 420 0 1 800 609 27 0 0 chrUextra 28223314 28223389 -781267 + (GAGAA)n Simple_repeat Simple_repeat 1 75 0 1 800 2891 72 28 8 chrUextra 28223490 28223995 -780661 - DMSAT6 Satellite Satellite -64 514 1 1 800 2519 98 40 28 chrUextra 28224099 28224608 -780048 + DMSAT6 Satellite Satellite 1 515 -4 1 800 650 14 0 0 chrUextra 28224709 28224783 -779873 + NOMAD_I LTR Gypsy 1020 1093 -5479 1 800 2726 96 0 7 chrUextra 28224778 28225218 -779438 + NOMAD_I LTR Gypsy 5499 5935 -637 1 800 1369 93 8 28 chrUextra 28225319 28225540 -779116 + STALKER4_LTR LTR Gypsy 218 399 -3 1 800 25 0 0 0 chrUextra 28225628 28225653 -779003 + AT_rich Low_complexity Low_complexity 1 25 0 1 800 589 245 7 7 chrUextra 28225677 28225829 -778827 + Stalker2_I LTR Gypsy 291 442 -6960 1 800 2636 78 20 28 chrUextra 28227147 28227653 -777003 + DMSAT6 Satellite Satellite 1 502 -3 1 800 514 73 0 0 chrUextra 28227756 28227824 -776832 + G2_DM LINE Jockey 2461 2528 -574 1 800 2930 40 11 0 chrUextra 28227824 28228177 -776479 - G2_DM LINE Jockey -8 3094 2738 1 800 499 167 0 0 chrUextra 28228176 28228254 -776402 - G2_DM LINE Jockey -521 2581 2504 1 800 351 21 0 110 chrUextra 28228365 28228474 -776182 + (TTGTG)n Simple_repeat Simple_repeat 4 100 0 1 800 2373 117 16 67 chrUextra 28228986 28229481 -775175 - DMSAT6 Satellite Satellite 0 470 1 1 800 269 184 92 33 chrUextra 28229616 28229768 -774888 + (TCTG)n Simple_repeat Simple_repeat 4 164 0 1 800 243 167 106 21 chrUextra 28229914 28230055 -774601 + (TCTA)n Simple_repeat Simple_repeat 4 156 0 1 800 359 109 0 0 chrUextra 28230801 28230856 -773800 - ACCORD2_I LTR Gypsy -36 7176 7122 1 800 1115 21 0 0 chrUextra 28230849 28230989 -773667 - ACCORD2_I LTR Gypsy -5438 1774 1635 1 800 920 91 203 31 chrUextra 28231049 28231276 -773380 - ACCORD2_I LTR Gypsy -5438 1774 1509 1 800 2580 162 12 4 chrUextra 28231422 28231919 -772737 + SAR_DM Satellite Satellite 369 869 -603 1 800 2409 100 6 78 chrUextra 28232019 28232517 -772139 + DMSAT6 Satellite Satellite 5 466 -4 1 800 205 321 0 0 chrUextra 28232837 28232918 -771738 + GA-rich Low_complexity Low_complexity 2 82 0 1 800 1143 40 6 44 chrUextra 28232979 28233137 -771519 - BATUMI_LTR LTR Pao 0 272 121 1 800 186 71 0 0 chrUextra 28234288 28234316 -770340 + (TTGG)n Simple_repeat Simple_repeat 4 31 0 1 800 274 185 90 30 chrUextra 28234475 28234683 -769973 + (TAGA)n Simple_repeat Simple_repeat 1 220 0 1 800 256 176 72 88 chrUextra 28234759 28234940 -769716 + (CAAGA)n Simple_repeat Simple_repeat 3 180 0 1 800 618 39 0 0 chrUextra 28235064 28235141 -769515 + (ATATG)n Simple_repeat Simple_repeat 3 79 0 1 800 1380 44 0 0 chrUextra 28235143 28235323 -769333 + (ATAAG)n Simple_repeat Simple_repeat 1 180 0 1 800 198 0 0 0 chrUextra 28235347 28235369 -769287 + (ATAAG)n Simple_repeat Simple_repeat 1 22 0 1 800 1290 56 0 0 chrUextra 28235390 28235570 -769086 + (ATAAG)n Simple_repeat Simple_repeat 1 180 0 1 800 2502 175 6 8 chrUextra 28235672 28236180 -768476 + SAR_DM Satellite Satellite 411 917 -555 1 800 2368 120 26 10 chrUextra 28236888 28237390 -767266 - DMSAT6 Satellite Satellite 0 510 1 1 800 2438 109 49 24 chrUextra 28237497 28238004 -766652 + DMSAT6 Satellite Satellite 1 519 -141 1 800 34 24 0 0 chrUextra 28238163 28238204 -766452 + AT_rich Low_complexity Low_complexity 1 41 0 1 800 2634 102 24 9 chrUextra 28239349 28239804 -764852 + DMSAT6 Satellite Satellite 9 470 0 1 800 993 17 0 0 chrUextra 28239928 28240043 -764613 + (ATAAG)n Simple_repeat Simple_repeat 1 115 0 1 800 2386 123 18 18 chrUextra 28240536 28241043 -763613 + DMSAT6 Satellite Satellite 1 507 -64 1 800 4300 2 0 4 chrUextra 28241143 28241616 -763040 + LSU-rRNA_Dme rRNA rRNA 2162 2632 -1268 1 800 300 0 0 0 chrUextra 28241616 28241650 -763006 + R1_DM LINE R1 1 34 -5322 1 800 4491 2 6 6 chrUextra 28241750 28242257 -762399 - LSU-rRNA_Dme rRNA rRNA -2188 1712 1206 1 800 4684 2 4 0 chrUextra 28243571 28244078 -760578 + SSU-rRNA_Dme rRNA rRNA 1392 1900 -95 1 800 4567 4 2 4 chrUextra 28244178 28244685 -759971 - R1_DM LINE R1 -1236 4120 3615 1 800 1455 35 0 4 chrUextra 28244787 28245013 -759643 + (ATAAG)n Simple_repeat Simple_repeat 1 225 0 1 800 1236 67 0 0 chrUextra 28245025 28245205 -759451 + (ATAAG)n Simple_repeat Simple_repeat 1 180 0 1 800 759 11 0 0 chrUextra 28245205 28245292 -759364 + (GAGAA)n Simple_repeat Simple_repeat 1 88 0 1 800 1434 53 4 2 chrUextra 28245392 28245899 -758757 + (CTATT)n Simple_repeat Simple_repeat 1 507 0 1 800 708 45 0 0 chrUextra 28246001 28246089 -758567 + (TTTTC)n Simple_repeat Simple_repeat 1 88 0 1 800 1071 102 0 0 chrUextra 28246099 28246276 -758380 + (TTCTC)n Simple_repeat Simple_repeat 4 180 0 1 800 1434 36 0 4 chrUextra 28246276 28246498 -758158 + (CTTAT)n Simple_repeat Simple_repeat 1 221 0 1 800 1620 0 0 0 chrUextra 28247230 28247410 -757246 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 800 241 163 0 0 chrUextra 28248427 28248476 -756180 + (CAGAGA)n Simple_repeat Simple_repeat 6 54 0 1 800 386 0 0 162 chrUextra 28248468 28248821 -755835 + (ACATG)n Simple_repeat Simple_repeat 1 295 0 1 800 460 0 0 139 chrUextra 28249036 28249455 -755201 + (TCTCTG)n Simple_repeat Simple_repeat 1 360 0 1 800 325 0 129 0 chrUextra 28249456 28249541 -755115 + (TC)n Simple_repeat Simple_repeat 1 96 0 1 800 2567 25 0 0 chrUextra 28249641 28249959 -754697 + DOC LINE Jockey 4407 4724 -1 1 800 21 36 0 0 chrUextra 28249978 28250006 -754650 + AT_rich Low_complexity Low_complexity 1 28 0 1 800 1599 5 0 0 chrUextra 28250549 28250753 -753903 + (TTCTC)n Simple_repeat Simple_repeat 1 204 0 1 800 353 114 15 125 chrUextra 28250854 28251054 -753602 + CT-rich Low_complexity Low_complexity 1 178 0 1 800 398 6 0 160 chrUextra 28251088 28251300 -753356 + CT-rich Low_complexity Low_complexity 1 178 0 1 800 26 30 0 0 chrUextra 28251564 28251597 -753059 + AT_rich Low_complexity Low_complexity 1 33 0 1 800 2620 105 10 57 chrUextra 28252076 28252569 -752087 - DMSAT6 Satellite Satellite 0 470 1 1 800 2663 90 22 10 chrUextra 28252679 28253177 -751479 + DMSAT6 Satellite Satellite 1 504 -3 1 800 1620 60 0 2 chrUextra 28253281 28253783 -750873 + (GAGAA)n Simple_repeat Simple_repeat 1 501 0 1 800 2246 185 10 10 chrUextra 28253883 28254386 -750270 - SAR_DM Satellite Satellite -718 754 252 1 800 2478 160 10 6 chrUextra 28254510 28254995 -749661 + SAR_DM Satellite Satellite 371 857 -615 1 800 4636 2 0 2 chrUextra 28255095 28255601 -749055 - SSU-rRNA_Dme rRNA rRNA -1001 994 490 1 800 4651 8 0 0 chrUextra 28256307 28256812 -747844 - LSU-rRNA_Dme rRNA rRNA -1601 2299 1795 1 800 2909 0 0 0 chrUextra 28256912 28257226 -747430 + LSU-rRNA_Dme rRNA rRNA 3587 3900 0 1 800 264 196 0 19 chrUextra 28257327 28257379 -747277 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 800 441 50 0 0 chrUextra 28257520 28257580 -747076 + (TTCTC)n Simple_repeat Simple_repeat 5 64 0 1 800 556 148 59 6 chrUextra 28257591 28257761 -746895 + GA-rich Low_complexity Low_complexity 1 179 0 1 800 254 13 118 13 chrUextra 28257750 28257826 -746830 + (GA)n Simple_repeat Simple_repeat 1 84 0 1 800 438 180 41 18 chrUextra 28257846 28258016 -746640 + A-rich Low_complexity Low_complexity 2 175 0 1 800 2604 93 19 48 chrUextra 28258123 28258599 -746057 - DMSAT6 Satellite Satellite 0 470 9 1 800 28 48 0 0 chrUextra 28258811 28258853 -745803 + AT_rich Low_complexity Low_complexity 1 42 0 1 800 32 0 0 0 chrUextra 28259182 28259214 -745442 + AT_rich Low_complexity Low_complexity 1 32 0 1 800 4259 4 4 0 chrUextra 28259332 28259824 -744832 + NOMAD_I LTR Gypsy 5215 5708 -864 1 800 4537 0 0 6 chrUextra 28259937 28260442 -744214 - SSU-rRNA_Dme rRNA rRNA -913 1082 581 1 800 1685 10 0 15 chrUextra 28260542 28260742 -743914 - LSU-rRNA_Dme rRNA rRNA -3703 197 1 1 800 4607 6 0 2 chrUextra 28261147 28261652 -743004 + R1_DM LINE R1 1404 1907 -3449 1 800 2688 93 17 40 chrUextra 28261757 28262238 -742418 - DMSAT6 Satellite Satellite 0 470 1 1 800 4533 0 0 2 chrUextra 28262962 28263466 -741190 + ROO_I LTR Pao 4938 5440 -2816 1 800 1037 76 8 17 chrUextra 28263596 28264063 -740593 - RSP Satellite Satellite 0 463 1 1 800 4570 2 2 6 chrUextra 28264170 28264674 -739982 - SSU-rRNA_Dme rRNA rRNA -513 1482 981 1 800 933 163 0 0 chrUextra 28264774 28265276 -739380 + (TATG)n Simple_repeat Simple_repeat 1 502 0 1 800 2508 83 0 60 chrUextra 28265385 28265882 -738774 + DMSAT6 Satellite Satellite 1 467 -3 1 800 2496 176 6 4 chrUextra 28265982 28266485 -738171 - SAR_DM Satellite Satellite -544 928 425 1 800 1620 10 0 0 chrUextra 28266587 28266983 -737673 + (CTTAT)n Simple_repeat Simple_repeat 1 396 0 1 800 870 19 0 0 chrUextra 28266986 28267090 -737566 + (TTCTC)n Simple_repeat Simple_repeat 2 105 0 1 800 2435 101 32 34 chrUextra 28268423 28268894 -735762 - DMSAT6 Satellite Satellite 0 470 1 1 800 2490 84 32 24 chrUextra 28269002 28269504 -735152 + DMSAT6 Satellite Satellite 1 506 -74 1 800 1035 0 0 0 chrUextra 28270210 28270325 -734331 + (CACAA)n Simple_repeat Simple_repeat 2 116 0 1 800 1988 14 0 0 chrUextra 28270325 28270546 -734110 - DMRT1B LINE R1 -140 5043 4823 1 800 1565 6 0 0 chrUextra 28270542 28270714 -733942 - DMRT1B LINE R1 -1103 4080 3909 1 800 1620 0 0 5 chrUextra 28271418 28271821 -732835 + (GAGAA)n Simple_repeat Simple_repeat 1 401 0 1 800 28 48 0 0 chrUextra 28272123 28272165 -732491 + AT_rich Low_complexity Low_complexity 1 42 0 1 800 30 0 0 0 chrUextra 28272492 28272522 -732134 + AT_rich Low_complexity Low_complexity 1 30 0 1 800 2709 99 22 2 chrUextra 28272626 28273121 -731535 + DMSAT6 Satellite Satellite 1 504 -267 1 800 1646 169 44 10 chrUextra 28273236 28273726 -730930 + SAR_DM Satellite Satellite 1 506 -749 1 800 2831 81 14 16 chrUextra 28273833 28274336 -730320 - DMSAT6 Satellite Satellite -3 502 1 1 800 1389 13 0 0 chrUextra 28274436 28274595 -730061 + (CAAGA)n Simple_repeat Simple_repeat 3 161 0 1 800 3293 8 0 16 chrUextra 28276848 28277351 -727305 - TABOR_I LTR Gypsy -7 6329 5724 1 800 2457 107 8 73 chrUextra 28278665 28279158 -725498 - DMSAT6 Satellite Satellite 0 470 10 1 800 1657 34 16 33 chrUextra 28279270 28279514 -725142 + NTS_DM Other Other 1 240 0 1 800 1743 42 17 17 chrUextra 28279514 28279754 -724902 + NTS_DM Other Other 1 240 0 1 800 2702 92 24 14 chrUextra 28279864 28280362 -724294 + DMSAT6 Satellite Satellite 1 502 0 1 800 439 7 0 137 chrUextra 28280465 28280808 -723848 + (CAGAGA)n Simple_repeat Simple_repeat 1 296 0 1 800 415 134 67 0 chrUextra 28280845 28280964 -723692 + GA-rich Low_complexity Low_complexity 5 131 0 1 800 1620 11 0 0 chrUextra 28281665 28281952 -722704 + (GAGAA)n Simple_repeat Simple_repeat 1 287 0 1 800 561 0 0 0 chrUextra 28282867 28282935 -721721 + NTS_DM Other Other 66 133 -107 1 800 1484 20 20 20 chrUextra 28282935 28283138 -721518 + NTS_DM Other Other 38 240 0 1 800 1724 27 18 18 chrUextra 28283138 28283367 -721289 + NTS_DM Other Other 1 229 -11 1 800 1554 13 0 0 chrUextra 28284072 28284309 -720347 + (CTTAT)n Simple_repeat Simple_repeat 1 237 0 1 800 317 138 0 12 chrUextra 28284309 28284329 -720327 + (TTCTC)n Simple_repeat Simple_repeat 2 21 0 1 800 1587 6 0 0 chrUextra 28284329 28284509 -720147 + (CTTAT)n Simple_repeat Simple_repeat 1 180 0 1 800 317 138 0 12 chrUextra 28284509 28284569 -720087 + (TTCTC)n Simple_repeat Simple_repeat 2 61 0 1 800 1566 11 0 0 chrUextra 28284673 28284853 -719803 + (TATTG)n Simple_repeat Simple_repeat 1 180 0 1 800 1533 17 0 0 chrUextra 28284883 28285063 -719593 + (TTATA)n Simple_repeat Simple_repeat 1 180 0 1 800 672 32 0 31 chrUextra 28285073 28285171 -719485 + (CATAT)n Simple_repeat Simple_repeat 2 96 0 1 800 4292 38 0 0 chrUextra 28285271 28285772 -718884 - R1_DM LINE R1 -3389 1967 1467 1 800 2568 91 16 57 chrUextra 28286475 28286965 -717691 - DMSAT6 Satellite Satellite 0 470 1 1 800 1514 43 0 0 chrUextra 28287074 28287258 -717398 + R2_DM LINE R2 3424 3607 0 1 800 483 36 0 0 chrUextra 28287266 28287321 -717335 + LSU-rRNA_Dme rRNA rRNA 2578 2632 -1268 1 800 2303 0 8 0 chrUextra 28287321 28287575 -717081 + R1_DM LINE R1 1 256 -5100 1 800 2685 92 16 14 chrUextra 28287675 28288174 -716482 - DMSAT6 Satellite Satellite -356 500 1 1 800 4132 28 0 0 chrUextra 28288275 28288775 -715881 - Invader2_I LTR Gypsy -842 3750 3251 1 800 4539 12 0 0 chrUextra 28289475 28289975 -714681 + LSU-rRNA_Dme rRNA rRNA 1862 2361 -1539 1 800 1380 40 0 0 chrUextra 28290076 28290251 -714405 + (TCTTG)n Simple_repeat Simple_repeat 2 176 0 1 800 1496 35 0 3 chrUextra 28290253 28290571 -714085 + (CTTAT)n Simple_repeat Simple_repeat 1 317 0 1 800 2332 124 6 34 chrUextra 28290690 28291166 -713490 + DMSAT6 Satellite Satellite 5 467 -3 1 800 741 57 19 9 chrUextra 28291277 28291384 -713272 + NTS_DM Other Other 26 133 -107 1 800 842 10 0 0 chrUextra 28291384 28291480 -713176 + NTS_DM Other Other 38 133 -107 1 800 1443 30 20 25 chrUextra 28291480 28291684 -712972 + NTS_DM Other Other 38 240 0 1 800 766 44 0 0 chrUextra 28291684 28291775 -712881 + NTS_DM Other Other 1 91 -149 1 800 4076 18 0 6 chrUextra 28291875 28292375 -712281 + LSU-rRNA_Dme rRNA rRNA 438 934 -2966 1 800 2432 119 17 40 chrUextra 28292492 28292966 -711690 + DMSAT6 Satellite Satellite 5 467 -3 1 800 2189 170 13 15 chrUextra 28293098 28293570 -711086 - SAR_DM Satellite Satellite -398 1074 604 1 800 2588 111 21 30 chrUextra 28294290 28294764 -709892 - DMSAT6 Satellite Satellite 0 470 1 1 800 4576 8 0 0 chrUextra 28295470 28295969 -708687 + LSU-rRNA_Dme rRNA rRNA 1843 2341 -1559 1 800 2504 165 8 8 chrUextra 28297268 28297762 -706894 + SAR_DM Satellite Satellite 369 862 -610 1 800 4615 0 0 0 chrUextra 28297866 28298365 -706291 - ROO_I LTR Pao -2450 5806 5308 1 800 516 241 0 0 chrUextra 28299167 28299341 -705315 + (CTTA)n Simple_repeat Simple_repeat 2 175 0 1 800 1620 6 0 6 chrUextra 28299828 28300162 -704494 + (TTGTG)n Simple_repeat Simple_repeat 1 331 0 1 800 502 7 0 134 chrUextra 28300262 28300433 -704223 + (CAAAAA)n Simple_repeat Simple_repeat 4 151 0 1 800 4566 2 0 2 chrUextra 28300860 28301358 -703298 - SSU-rRNA_Dme rRNA rRNA -966 1029 533 1 800 2507 165 6 8 chrUextra 28301465 28301955 -702701 - SAR_DM Satellite Satellite -569 903 415 1 800 2555 67 32 38 chrUextra 28302056 28302554 -702102 + DMSAT6 Satellite Satellite 1 494 -430 1 800 4259 4 2 0 chrUextra 28302695 28303152 -701504 - SSU-rRNA_Dme rRNA rRNA 0 1995 1538 1 800 853 31 344 0 chrUextra 28303253 28303381 -701275 - PROTOP_A DNA P -933 172 1 1 800 4469 8 0 0 chrUextra 28303850 28304335 -700321 - DMRT1B LINE R1 -978 4205 3721 1 800 1409 169 10 8 chrUextra 28304449 28304945 -699711 - SAR_DM Satellite Satellite -587 496 1 1 800 189 74 0 0 chrUextra 28305079 28305106 -699550 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 800 186 71 0 0 chrUextra 28305283 28305311 -699345 + (CCAA)n Simple_repeat Simple_repeat 4 31 0 1 800 1386 12 0 0 chrUextra 28306239 28306407 -698249 + DOC6_DM LINE Jockey 4032 4199 -23 1 800 2814 10 0 3 chrUextra 28306424 28306736 -697920 - NOMAD_LTR LTR Gypsy 0 518 208 1 800 2603 109 21 11 chrUextra 28306842 28307307 -697349 + DMSAT6 Satellite Satellite 1 470 0 1 800 2394 168 6 12 chrUextra 28307441 28307930 -696726 - SAR_DM Satellite Satellite -426 1046 561 1 800 2428 109 30 22 chrUextra 28308030 28308527 -696129 - DMSAT6 Satellite Satellite -3 500 1 1 800 639 0 0 0 chrUextra 28309224 28309295 -695361 + (TTCTC)n Simple_repeat Simple_repeat 2 72 0 1 800 1554 11 0 0 chrUextra 28309309 28309489 -695167 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 801 2409 110 17 35 chrUextra 28311611 28312090 -692566 - DMSAT6 Satellite Satellite 0 470 1 1 801 4069 22 0 2 chrUextra 28312803 28313299 -691357 + ROO_I LTR Pao 695 1189 -7067 1 801 390 81 53 13 chrUextra 28313399 28313474 -691182 + (GAGAA)n Simple_repeat Simple_repeat 2 79 0 1 801 2543 101 21 28 chrUextra 28314613 28315084 -689572 - DMSAT6 Satellite Satellite 0 470 3 1 801 4025 30 45 0 chrUextra 28316383 28316875 -687781 - FW_DM LINE Jockey -2657 2035 1522 1 801 36 0 0 0 chrUextra 28316990 28317026 -687630 + AT_rich Low_complexity Low_complexity 1 36 0 1 801 2149 11 7 14 chrUextra 28317196 28317471 -687185 - DOC LINE Jockey -4 4721 4449 1 801 2367 125 13 26 chrUextra 28317571 28318039 -686617 - DMSAT6 Satellite Satellite -4 466 5 1 801 4173 20 0 4 chrUextra 28318166 28318661 -685995 + LSU-rRNA_Dme rRNA rRNA 536 1028 -2872 1 801 4457 22 0 2 chrUextra 28319356 28319851 -684805 - MAX_I LTR Pao -1246 6668 6175 1 801 1620 8 0 0 chrUextra 28319951 28320446 -684210 + (TAGA)n Simple_repeat Simple_repeat 1 495 0 1 801 2441 100 30 28 chrUextra 28320546 28321041 -683615 - DMSAT6 Satellite Satellite -68 495 1 1 801 2350 169 10 12 chrUextra 28321145 28321636 -683020 + SAR_DM Satellite Satellite 523 1012 -460 1 801 358 22 0 0 chrUextra 28321739 28321784 -682872 + NTS_DM Other Other 157 201 -39 1 801 861 37 0 27 chrUextra 28321836 28321948 -682708 + NTS_DM Other Other 25 133 -107 1 801 986 32 0 23 chrUextra 28321948 28322076 -682580 + NTS_DM Other Other 38 162 -78 1 801 339 67 0 0 chrUextra 28322186 28322231 -682425 + NTS_DM Other Other 4 48 -192 1 801 4148 26 0 0 chrUextra 28322331 28322826 -681830 + LSU-rRNA_Dme rRNA rRNA 232 726 -3174 1 801 506 121 0 39 chrUextra 28323520 28323569 -681087 + polypurine Low_complexity Low_complexity 2 49 0 1 801 1200 84 0 0 chrUextra 28323569 28323748 -680908 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 801 506 121 0 39 chrUextra 28323748 28323827 -680829 + polypurine Low_complexity Low_complexity 50 125 0 1 801 1218 78 0 0 chrUextra 28323827 28324007 -680649 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 801 1620 13 0 0 chrUextra 28324114 28324563 -680093 + (GAGAA)n Simple_repeat Simple_repeat 1 449 0 1 801 2459 94 2 52 chrUextra 28324708 28325189 -679467 - DMSAT6 Satellite Satellite -13 457 1 1 801 185 59 0 56 chrUextra 28325302 28325312 -679344 + (CGCTG)n Simple_repeat Simple_repeat 2 10 0 1 801 408 20 0 0 chrUextra 28325312 28325361 -679295 + (TTCTC)n Simple_repeat Simple_repeat 5 53 0 1 801 185 59 0 56 chrUextra 28325361 28325386 -679270 + (CGCTG)n Simple_repeat Simple_repeat 2 26 0 1 801 201 94 0 0 chrUextra 28325391 28325423 -679233 + (AGATG)n Simple_repeat Simple_repeat 3 34 0 1 801 1620 0 0 0 chrUextra 28325424 28325784 -678872 + (GAGAA)n Simple_repeat Simple_repeat 1 360 0 1 801 2709 85 41 2 chrUextra 28326499 28326984 -677672 + DMSAT6 Satellite Satellite 1 504 0 1 801 1535 57 0 8 chrUextra 28327689 28328169 -676487 + (TTCTC)n Simple_repeat Simple_repeat 1 475 0 1 801 4516 0 2 4 chrUextra 28328271 28328764 -675892 - SSU-rRNA_Dme rRNA rRNA -714 1281 790 1 801 2615 102 24 6 chrUextra 28328864 28329357 -675299 - DMSAT6 Satellite Satellite 0 501 1 1 801 26 101 0 0 chrUextra 28329484 28329573 -675083 + AT_rich Low_complexity Low_complexity 1 89 0 1 801 2640 97 13 46 chrUextra 28331846 28332322 -672334 - DMSAT6 Satellite Satellite 0 470 11 1 801 968 55 211 40 chrUextra 28332433 28332660 -671996 - ACCORD2_I LTR Gypsy -5438 1774 1509 1 801 1355 58 12 0 chrUextra 28332743 28332914 -671742 - ACCORD2_I LTR Gypsy -5845 1367 1195 1 801 4566 0 0 2 chrUextra 28333014 28333506 -671150 + R1_DM LINE R1 2913 3403 -1953 1 801 504 0 0 0 chrUextra 28333606 28333662 -670994 + (GAGAA)n Simple_repeat Simple_repeat 2 57 0 1 801 1620 0 0 0 chrUextra 28334198 28334472 -670184 + (GAGAA)n Simple_repeat Simple_repeat 1 274 0 1 801 372 88 0 0 chrUextra 28334790 28334847 -669809 + (TTCTC)n Simple_repeat Simple_repeat 1 57 0 1 801 3536 39 0 8 chrUextra 28336566 28337054 -667602 + NOMAD_I LTR Gypsy 5330 5813 -759 1 801 2597 95 8 37 chrUextra 28337158 28337649 -667007 - DMSAT6 Satellite Satellite -23 477 1 1 801 621 102 0 0 chrUextra 28337749 28337857 -666799 + (CTTAT)n Simple_repeat Simple_repeat 3 110 0 1 801 1203 102 0 0 chrUextra 28337858 28338035 -666621 + (TTATA)n Simple_repeat Simple_repeat 4 180 0 1 801 189 74 0 0 chrUextra 28338035 28338062 -666594 + (TATTG)n Simple_repeat Simple_repeat 5 31 0 1 801 1265 57 17 0 chrUextra 28338063 28338240 -666416 + (TTATA)n Simple_repeat Simple_repeat 1 180 0 1 801 414 41 0 0 chrUextra 28338348 28338397 -666259 - MICROPIA_I LTR Gypsy -1259 3217 3169 1 801 1230 161 16 33 chrUextra 28338399 28338617 -666039 + Gypsy8_LTR LTR Gypsy 1 214 -90 1 801 1212 118 9 51 chrUextra 28338617 28338831 -665825 + Gypsy8_I LTR Gypsy 1 205 -4142 1 801 34 24 0 0 chrUextra 28339247 28339288 -665368 + AT_rich Low_complexity Low_complexity 1 41 0 1 801 460 0 0 139 chrUextra 28339526 28339735 -664921 + (CAGAGA)n Simple_repeat Simple_repeat 1 180 0 1 801 418 11 0 139 chrUextra 28339778 28339987 -664669 + (CAGAGA)n Simple_repeat Simple_repeat 1 180 0 1 801 2493 93 41 19 chrUextra 28340708 28341195 -663461 - DMSAT6 Satellite Satellite -343 498 1 1 801 1491 28 0 0 chrUextra 28341887 28342067 -662589 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 801 1050 95 0 0 chrUextra 28342072 28342251 -662405 + (CATCT)n Simple_repeat Simple_repeat 1 179 0 1 801 1547 41 0 4 chrUextra 28342477 28342947 -661709 + (TTGTG)n Simple_repeat Simple_repeat 1 467 0 1 801 189 0 0 0 chrUextra 28342947 28342968 -661688 + (ATGTG)n Simple_repeat Simple_repeat 5 25 0 1 801 2476 105 31 10 chrUextra 28343068 28343559 -661097 - DMSAT6 Satellite Satellite -113 501 1 1 801 1589 189 73 22 chrUextra 28343659 28344145 -660511 + SAR_DM Satellite Satellite 1 510 -225 1 801 228 0 0 161 chrUextra 28346091 28346506 -658150 + (GACTG)n Simple_repeat Simple_repeat 1 348 0 1 801 398 186 23 77 chrUextra 28346622 28347098 -657558 + GA-rich Low_complexity Low_complexity 1 450 0 1 801 234 154 258 15 chrUextra 28347274 28347340 -657316 + LSU-rRNA_Dme rRNA rRNA 2570 2651 -1249 1 801 264 196 0 19 chrUextra 28347367 28347419 -657237 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 801 277 176 0 19 chrUextra 28347450 28347502 -657154 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 801 22 56 0 0 chrUextra 28347515 28347551 -657105 + AT_rich Low_complexity Low_complexity 1 36 0 1 801 918 9 0 27 chrUextra 28347577 28347689 -656967 + NTS_DM Other Other 25 133 -107 1 801 2463 95 26 31 chrUextra 28348381 28348871 -655785 + DMSAT6 Satellite Satellite 1 487 0 1 801 1620 16 0 0 chrUextra 28348972 28349424 -655232 + (CTTAT)n Simple_repeat Simple_repeat 1 452 0 1 801 4441 6 0 2 chrUextra 28349562 28350050 -654606 - R1_DM LINE R1 -3400 1956 1470 1 801 2851 9 0 0 chrUextra 28350150 28350467 -654189 - STALKER4_I LTR Gypsy -4369 2161 1845 1 801 1322 24 0 6 chrUextra 28350474 28350639 -654017 - STALKER4_I LTR Gypsy -5006 1524 1361 1 801 1373 19 0 0 chrUextra 28351328 28351488 -653168 - NTS_DM Other Other -80 160 1 1 801 1871 13 17 17 chrUextra 28351488 28351728 -652928 - NTS_DM Other Other 0 240 1 1 801 625 0 45 34 chrUextra 28351728 28351817 -652839 - NTS_DM Other Other 0 240 151 1 801 4463 4 2 0 chrUextra 28351917 28352406 -652250 + LSU-rRNA_Dme rRNA rRNA 2682 3171 -729 1 801 461 137 48 8 chrUextra 28352506 28352612 -652044 + GA-rich Low_complexity Low_complexity 5 114 0 1 801 778 0 105 0 chrUextra 28352612 28352774 -651882 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 801 461 137 48 8 chrUextra 28352774 28352792 -651864 + polypurine Low_complexity Low_complexity 115 133 0 1 801 1248 17 28 6 chrUextra 28352801 28352977 -651679 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 801 577 274 0 13 chrUextra 28353096 28353251 -651405 - NINJA_I LTR Pao -2839 3172 3020 1 801 3065 9 0 0 chrUextra 28353240 28353583 -651073 - FW_DM LINE Jockey -2766 1926 1584 1 801 2846 91 12 33 chrUextra 28353685 28354165 -650491 - DMSAT6 Satellite Satellite 0 470 1 1 801 2520 110 8 34 chrUextra 28354273 28354751 -649905 + DMSAT6 Satellite Satellite 5 470 0 1 801 333 153 51 45 chrUextra 28354860 28355038 -649618 + GA-rich Low_complexity Low_complexity 1 179 0 1 801 460 0 0 137 chrUextra 28355048 28355347 -649309 + (CAGAGA)n Simple_repeat Simple_repeat 1 258 0 1 801 1488 22 0 0 chrUextra 28356049 28356229 -648427 + (CTTAT)n Simple_repeat Simple_repeat 1 180 0 1 801 1602 4 0 4 chrUextra 28356240 28356518 -648138 + (CTTAT)n Simple_repeat Simple_repeat 1 276 0 1 801 1620 0 0 0 chrUextra 28356623 28357111 -647545 + (TAGA)n Simple_repeat Simple_repeat 1 488 0 1 801 2756 83 31 2 chrUextra 28357240 28357697 -646959 + DMSAT6 Satellite Satellite 1 470 0 1 801 891 68 0 0 chrUextra 28357939 28358071 -646585 + (TCTTG)n Simple_repeat Simple_repeat 2 133 0 1 801 2546 104 32 28 chrUextra 28358402 28358867 -645789 + DMSAT6 Satellite Satellite 1 467 -3 1 801 544 28 3 132 chrUextra 28358973 28359352 -645304 + T-rich Low_complexity Low_complexity 1 329 0 1 801 4428 0 4 4 chrUextra 28359560 28360047 -644609 - SSU-rRNA_Dme rRNA rRNA -460 1535 1049 1 801 621 0 0 0 chrUextra 28360147 28360216 -644440 + (TTCTC)n Simple_repeat Simple_repeat 3 71 0 1 801 261 75 0 0 chrUextra 28360230 28360270 -644386 + (CGAGA)n Simple_repeat Simple_repeat 1 40 0 1 801 1620 14 0 0 chrUextra 28360271 28360631 -644025 + (GAGAA)n Simple_repeat Simple_repeat 1 360 0 1 801 2355 149 17 36 chrUextra 28360734 28361200 -643456 - HETA LINE telomeric -1185 4896 4440 1 801 2522 96 48 18 chrUextra 28361332 28361788 -642868 - DMSAT6 Satellite Satellite 0 470 1 1 801 3079 66 14 25 chrUextra 28361911 28362394 -642262 - MDG1_I LTR Gypsy -5344 1252 775 1 801 202 265 0 0 chrUextra 28362506 28362555 -642101 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 801 1953 97 15 52 chrUextra 28363080 28363406 -641250 - Gypsy12_I LTR Gypsy -5206 340 27 1 801 777 206 32 21 chrUextra 28363376 28363565 -641091 - Gypsy12_LTR LTR Gypsy -1938 398 208 1 801 23 54 0 0 chrUextra 28363673 28363710 -640946 + AT_rich Low_complexity Low_complexity 1 37 0 1 801 850 9 9 36 chrUextra 28363736 28363848 -640808 + NTS_DM Other Other 25 133 -107 1 801 842 10 0 0 chrUextra 28363848 28363944 -640712 + NTS_DM Other Other 38 133 -107 1 801 1484 20 20 20 chrUextra 28363944 28364147 -640509 + NTS_DM Other Other 38 240 0 1 801 2261 173 6 19 chrUextra 28364840 28365323 -639333 + SAR_DM Satellite Satellite 425 901 -571 1 801 4110 0 5 0 chrUextra 28365424 28365868 -638788 - R1_DM LINE R1 -4910 446 1 1 801 397 0 0 0 chrUextra 28365868 28365910 -638746 - LSU-rRNA_Dme rRNA rRNA -1268 2632 2591 1 801 21 89 0 0 chrUextra 28366015 28366071 -638585 + AT_rich Low_complexity Low_complexity 1 56 0 1 801 1620 13 0 0 chrUextra 28366613 28367082 -637574 + (CTTAT)n Simple_repeat Simple_repeat 1 469 0 1 801 1620 8 0 0 chrUextra 28367182 28367571 -637085 + (GAGAA)n Simple_repeat Simple_repeat 1 389 0 1 801 1041 70 0 0 chrUextra 28367770 28367926 -636730 + (GAGAA)n Simple_repeat Simple_repeat 4 159 0 1 801 1512 20 0 0 chrUextra 28368354 28368557 -636099 + (CACAA)n Simple_repeat Simple_repeat 1 203 0 1 801 2542 4 0 4 chrUextra 28368562 28368840 -635816 - STALKER4_LTR LTR Gypsy 0 402 126 1 801 1203 7 0 0 chrUextra 28369525 28369661 -634995 + (GAGAA)n Simple_repeat Simple_repeat 5 140 0 1 801 3001 80 19 4 chrUextra 28370123 28370586 -634070 - DMSAT6 Satellite Satellite 0 470 1 1 801 4491 2 0 0 chrUextra 28370695 28371180 -633476 + LSU-rRNA_Dme rRNA rRNA 2748 3232 -668 1 801 540 0 0 0 chrUextra 28371705 28371765 -632891 + (GAGAA)n Simple_repeat Simple_repeat 4 63 0 1 801 520 17 17 0 chrUextra 28372450 28372510 -632146 - NTS_DM Other Other -179 61 1 1 801 1858 17 17 17 chrUextra 28372510 28372750 -631906 - NTS_DM Other Other 0 240 1 1 801 1284 22 22 22 chrUextra 28372750 28372935 -631721 - NTS_DM Other Other 0 240 56 1 801 4278 0 2 0 chrUextra 28373035 28373520 -631136 - LSU-rRNA_Dme rRNA rRNA -3101 799 314 1 801 4381 16 0 0 chrUextra 28374205 28374690 -629966 + R1_DM LINE R1 3209 3693 -1663 1 801 4333 6 2 6 chrUextra 28374790 28375274 -629382 - LSU-rRNA_Dme rRNA rRNA -2388 1512 1031 1 801 2353 102 15 53 chrUextra 28375379 28375853 -628803 - DMSAT6 Satellite Satellite -3 467 12 1 801 4464 4 0 0 chrUextra 28376542 28377026 -627630 + R1_DM LINE R1 3062 3545 -1811 1 801 2252 121 43 35 chrUextra 28377144 28377607 -627049 + DMSAT6 Satellite Satellite 1 467 -3 1 801 940 86 8 23 chrUextra 28377711 28378181 -626475 - RSP Satellite Satellite 0 463 1 1 801 2570 94 26 26 chrUextra 28378295 28378762 -625894 - DMSAT6 Satellite Satellite -3 467 1 1 801 897 185 14 2 chrUextra 28378878 28379362 -625294 + SAR_DM Satellite Satellite 1 489 -645 1 801 1582 5 25 15 chrUextra 28380046 28380249 -624407 + NTS_DM Other Other 36 240 0 1 801 1925 0 21 13 chrUextra 28380249 28380487 -624169 + NTS_DM Other Other 1 240 0 1 801 390 0 0 0 chrUextra 28380487 28380529 -624127 + NTS_DM Other Other 1 42 -198 1 801 1312 69 0 11 chrUextra 28380629 28381108 -623548 + (CTATT)n Simple_repeat Simple_repeat 1 473 0 1 801 4485 0 0 0 chrUextra 28381212 28381695 -622961 - R1_DM LINE R1 -3715 1641 1159 1 801 4226 17 50 0 chrUextra 28381795 28382278 -622378 + BATUMI_I LTR Pao 5032 5538 -2425 1 801 3103 48 5 0 chrUextra 28382428 28382805 -621851 - STALKER4_LTR LTR Gypsy -23 379 1 1 801 404 89 0 0 chrUextra 28382805 28382861 -621795 + CIRCE LINE Composite 3659 3714 -2642 1 801 1257 61 0 0 chrUextra 28382963 28383143 -621513 + (AGATG)n Simple_repeat Simple_repeat 1 180 0 1 801 567 53 0 0 chrUextra 28383147 28383222 -621434 + (ACATG)n Simple_repeat Simple_repeat 2 76 0 1 801 1503 23 0 0 chrUextra 28383225 28383444 -621212 + (AGATG)n Simple_repeat Simple_repeat 1 219 0 1 801 1314 58 0 0 chrUextra 28383544 28383805 -620851 + (GAGAA)n Simple_repeat Simple_repeat 1 261 0 1 801 1196 57 0 6 chrUextra 28383825 28384000 -620656 + (GAGAA)n Simple_repeat Simple_repeat 1 174 0 1 801 234 0 0 0 chrUextra 28384430 28384456 -620200 + (TGG)n Simple_repeat Simple_repeat 1 26 0 1 801 868 24 8 8 chrUextra 28384710 28384836 -619820 + NTS_DM Other Other 76 201 -39 1 801 869 18 0 35 chrUextra 28384888 28385001 -619655 + NTS_DM Other Other 25 133 -107 1 801 1312 18 0 6 chrUextra 28385001 28385166 -619490 + NTS_DM Other Other 38 201 -39 1 801 1158 122 0 0 chrUextra 28385297 28385661 -618995 + (TA)n Simple_repeat Simple_repeat 1 364 0 1 801 441 129 0 0 chrUextra 28385660 28385730 -618926 + (CATA)n Simple_repeat Simple_repeat 2 71 0 1 801 23 33 0 0 chrUextra 28385744 28385774 -618882 + AT_rich Low_complexity Low_complexity 1 30 0 1 801 297 29 0 0 chrUextra 28385876 28385910 -618746 - NTS_DM Other Other -206 34 1 1 801 1826 25 17 17 chrUextra 28385910 28386150 -618506 - NTS_DM Other Other 0 240 1 1 801 1542 20 19 19 chrUextra 28386150 28386358 -618298 - NTS_DM Other Other 0 240 33 1 801 4289 12 4 2 chrUextra 28386458 28386940 -617716 + R1_DM LINE R1 3623 4105 -1251 1 801 2429 167 10 4 chrUextra 28387040 28387521 -617135 + SAR_DM Satellite Satellite 387 870 -602 1 801 1639 40 17 22 chrUextra 28387622 28387852 -616804 - NTS_DM Other Other -11 229 1 1 801 1411 40 20 20 chrUextra 28387852 28388055 -616601 - NTS_DM Other Other 0 240 38 1 801 382 0 0 0 chrUextra 28388055 28388104 -616552 - NTS_DM Other Other -107 133 85 1 801 479 19 0 0 chrUextra 28388204 28388257 -616399 + SSU-rRNA_Dme rRNA rRNA 1317 1369 -626 1 801 34 24 0 0 chrUextra 28388288 28388329 -616327 + AT_rich Low_complexity Low_complexity 1 41 0 1 801 21 95 0 0 chrUextra 28388544 28388607 -616049 + AT_rich Low_complexity Low_complexity 1 63 0 1 801 616 0 0 0 chrUextra 28388619 28388686 -615970 + LSU-rRNA_Dme rRNA rRNA 1 67 -3833 1 801 1620 19 0 0 chrUextra 28388820 28389145 -615511 + (GAGAA)n Simple_repeat Simple_repeat 1 325 0 1 801 2365 111 6 38 chrUextra 28389369 28389847 -614809 - DMSAT6 Satellite Satellite -3 467 5 1 801 2539 107 24 13 chrUextra 28389948 28390404 -614252 - DMSAT6 Satellite Satellite -5 465 5 1 801 2627 94 24 26 chrUextra 28390542 28391010 -613646 + DMSAT6 Satellite Satellite 1 467 -3 1 801 1559 17 0 3 chrUextra 28391691 28391982 -612674 + (TTCTC)n Simple_repeat Simple_repeat 1 290 0 1 801 1421 23 0 6 chrUextra 28391991 28392169 -612487 + (GAGAA)n Simple_repeat Simple_repeat 4 180 0 1 801 2625 95 24 9 chrUextra 28392287 28392742 -611914 - DMSAT6 Satellite Satellite 0 470 9 1 801 1540 47 0 11 chrUextra 28394010 28394489 -610167 + (GAGAA)n Simple_repeat Simple_repeat 1 473 0 1 801 1494 23 69 0 chrUextra 28394590 28394858 -609798 + (CAAGA)n Simple_repeat Simple_repeat 1 286 0 1 801 2052 192 8 12 chrUextra 28395170 28395649 -609007 + SAR_DM Satellite Satellite 288 764 -708 1 801 2536 92 24 17 chrUextra 28395767 28396230 -608426 - DMSAT6 Satellite Satellite 0 470 5 1 801 4368 0 2 6 chrUextra 28396330 28396810 -607846 - LSU-rRNA_Dme rRNA rRNA -387 3513 3036 1 801 4211 19 0 4 chrUextra 28396910 28397390 -607266 - LSU-rRNA_Dme rRNA rRNA -1593 2307 1830 1 801 21 57 0 0 chrUextra 28398136 28398171 -606485 + AT_rich Low_complexity Low_complexity 1 35 0 1 801 266 196 0 19 chrUextra 28398184 28398236 -606420 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 801 1972 0 0 0 chrUextra 28398337 28398548 -606108 - LSU-rRNA_Dme rRNA rRNA 0 3900 3690 1 801 1009 69 0 0 chrUextra 28398648 28398778 -605878 - SSU-rRNA_Dme rRNA rRNA -1865 130 1 1 801 2567 96 28 7 chrUextra 28399245 28399705 -604951 + DMSAT6 Satellite Satellite 1 470 0 1 801 3900 15 2 2 chrUextra 28399806 28400285 -604371 + DM176_I LTR Gypsy 1145 1623 -4797 1 801 26 0 0 0 chrUextra 28400782 28400808 -603848 + AT_rich Low_complexity Low_complexity 1 26 0 1 801 4110 33 0 0 chrUextra 28401543 28402022 -602634 - LSU-rRNA_Dme rRNA rRNA -706 3194 2716 1 801 314 0 0 0 chrUextra 28402122 28402156 -602500 - NTS_DM Other Other -206 34 1 1 801 1969 4 17 13 chrUextra 28402156 28402395 -602261 - NTS_DM Other Other 0 240 1 1 801 1419 59 19 15 chrUextra 28402395 28402601 -602055 - NTS_DM Other Other 0 240 34 1 801 2575 111 19 9 chrUextra 28402711 28403176 -601480 + DMSAT6 Satellite Satellite 1 470 0 1 801 2631 90 26 15 chrUextra 28403291 28403752 -600904 - DMSAT6 Satellite Satellite -4 466 1 1 801 2574 117 22 7 chrUextra 28404443 28404906 -599750 - DMSAT6 Satellite Satellite 0 470 1 1 801 2464 165 6 6 chrUextra 28405017 28405492 -599164 - SAR_DM Satellite Satellite -581 891 417 1 801 654 13 0 0 chrUextra 28405592 28405668 -598988 - ALUII_DM Unknown Unknown -164 76 1 1 801 21 57 0 0 chrUextra 28405668 28405703 -598953 + AT_rich Low_complexity Low_complexity 1 35 0 1 801 22 35 0 0 chrUextra 28405899 28405928 -598728 + AT_rich Low_complexity Low_complexity 1 29 0 1 801 34 24 0 0 chrUextra 28406029 28406070 -598586 + AT_rich Low_complexity Low_complexity 1 41 0 1 801 1433 33 0 5 chrUextra 28406170 28406385 -598271 + (GAGAA)n Simple_repeat Simple_repeat 1 214 0 1 801 3180 11 1 4 chrUextra 28406747 28407221 -597435 + TABOR_I LTR Gypsy 5752 6336 0 1 801 1554 17 0 0 chrUextra 28407903 28408263 -596393 + (TTCTC)n Simple_repeat Simple_repeat 1 360 0 1 801 306 107 0 0 chrUextra 28408264 28408320 -596336 + (TCTCG)n Simple_repeat Simple_repeat 5 60 0 1 801 468 0 0 0 chrUextra 28408326 28408378 -596278 + (GAGAA)n Simple_repeat Simple_repeat 1 52 0 1 801 189 0 0 0 chrUextra 28408647 28408668 -595988 + (T)n Simple_repeat Simple_repeat 1 21 0 1 801 2330 24 3 0 chrUextra 28408668 28408955 -595701 - DOC LINE Jockey 0 4725 4438 1 801 395 0 0 162 chrUextra 28409097 28409528 -595128 + (CTATG)n Simple_repeat Simple_repeat 1 361 0 1 801 1010 147 0 4 chrUextra 28410209 28410446 -594210 + (TA)n Simple_repeat Simple_repeat 1 235 0 1 801 971 161 0 6 chrUextra 28410466 28410647 -594009 + (TA)n Simple_repeat Simple_repeat 1 180 0 1 801 216 167 0 0 chrUextra 28410649 28410685 -593971 + (CATA)n Simple_repeat Simple_repeat 1 36 0 1 801 3331 71 0 27 chrUextra 28411363 28411840 -592816 + NOMAD_I LTR Gypsy 5586 6049 -523 1 801 3110 16 0 27 chrUextra 28411940 28412416 -592240 - TABOR_I LTR Gypsy -13 6323 5744 1 801 2338 108 57 5 chrUextra 28412516 28412935 -591721 + DMSAT6 Satellite Satellite 30 470 0 1 801 1065 89 0 0 chrUextra 28413103 28413249 -591407 + TART LINE telomeric 1714 1859 -12618 1 801 2557 64 9 0 chrUextra 28413240 28413568 -591088 + TART LINE telomeric 2045 2375 -12102 1 801 2740 80 17 26 chrUextra 28413681 28414144 -590512 + DMSAT6 Satellite Satellite 9 467 -3 1 801 1620 18 0 0 chrUextra 28414245 28414530 -590126 + (AGATG)n Simple_repeat Simple_repeat 1 285 0 1 801 1514 11 0 6 chrUextra 28414530 28414711 -589945 + (ACATG)n Simple_repeat Simple_repeat 1 180 0 1 801 2215 191 11 8 chrUextra 28414820 28415296 -589360 - SAR_DM Satellite Satellite -658 814 338 1 801 2358 103 11 61 chrUextra 28415396 28415872 -588784 - DMSAT6 Satellite Satellite -6 464 13 1 801 2467 63 12 62 chrUextra 28415972 28416447 -588209 + CIRCE LINE Composite 5122 5521 -835 1 801 4374 2 0 4 chrUextra 28416547 28417022 -587634 - LSU-rRNA_Dme rRNA rRNA -514 3386 2914 1 801 458 46 0 139 chrUextra 28417205 28417407 -587249 + A-rich Low_complexity Low_complexity 4 177 0 1 801 312 155 123 0 chrUextra 28417405 28417560 -587096 + (TGAA)n Simple_repeat Simple_repeat 3 176 0 1 801 2264 124 8 32 chrUextra 28417698 28418171 -586485 - DMSAT6 Satellite Satellite 0 470 9 1 801 2459 98 21 30 chrUextra 28418272 28418745 -585911 + DMSAT6 Satellite Satellite 2 470 0 1 801 2172 187 11 8 chrUextra 28419422 28419897 -584759 - SAR_DM Satellite Satellite -489 983 508 1 801 3560 25 20 16 chrUextra 28419997 28420450 -584206 - Gypsy12_LTR LTR Gypsy -796 1540 1086 1 801 189 0 0 0 chrUextra 28420450 28420471 -584185 + (T)n Simple_repeat Simple_repeat 1 21 0 1 801 342 0 0 0 chrUextra 28420571 28420609 -584047 + (TTCTC)n Simple_repeat Simple_repeat 1 38 0 1 801 2514 105 15 35 chrUextra 28422299 28422762 -581894 - DMSAT6 Satellite Satellite 0 470 17 1 801 246 62 0 0 chrUextra 28422869 28422901 -581755 + (GAAAA)n Simple_repeat Simple_repeat 4 35 0 1 801 1305 83 0 0 chrUextra 28422901 28423081 -581575 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 801 1431 50 0 0 chrUextra 28423081 28423261 -581395 + (GAAAA)n Simple_repeat Simple_repeat 1 180 0 1 801 780 118 41 20 chrUextra 28423477 28423772 -580884 + CT-rich Low_complexity Low_complexity 1 301 0 1 801 1074 8 0 0 chrUextra 28423790 28423913 -580743 + (GAGAA)n Simple_repeat Simple_repeat 1 123 0 1 801 1239 62 0 0 chrUextra 28424032 28424210 -580446 + (ATAAG)n Simple_repeat Simple_repeat 1 178 0 1 801 1151 72 0 6 chrUextra 28424225 28424406 -580250 + (ATAAG)n Simple_repeat Simple_repeat 1 180 0 1 801 423 87 0 0 chrUextra 28424417 28424486 -580170 + (ATAAG)n Simple_repeat Simple_repeat 3 71 0 1 801 662 149 0 11 chrUextra 28424587 28424764 -579892 + T-rich Low_complexity Low_complexity 4 178 0 1 801 226 40 5 142 chrUextra 28424853 28425058 -579598 + (TTGTG)n Simple_repeat Simple_repeat 4 180 0 1 801 3285 18 13 38 chrUextra 28425160 28425632 -579024 + Stalker2_I LTR Gypsy 6837 7296 -106 1 801 592 132 66 0 chrUextra 28425732 28425898 -578758 + CT-rich Low_complexity Low_complexity 1 177 0 1 801 598 136 59 6 chrUextra 28425931 28426101 -578555 + CT-rich Low_complexity Low_complexity 1 179 0 1 801 181 139 47 0 chrUextra 28426161 28426204 -578452 + GA-rich Low_complexity Low_complexity 5 49 0 1 801 522 0 0 0 chrUextra 28426720 28426778 -577878 + (CAAGA)n Simple_repeat Simple_repeat 5 62 0 1 801 1469 23 0 6 chrUextra 28427451 28427629 -577027 + (TTCTC)n Simple_repeat Simple_repeat 1 177 0 1 801 223 49 0 47 chrUextra 28427629 28427672 -576984 + (TCTCG)n Simple_repeat Simple_repeat 1 41 0 1 801 1175 67 0 6 chrUextra 28427672 28427852 -576804 + (TTCTC)n Simple_repeat Simple_repeat 1 179 0 1 801 222 62 0 0 chrUextra 28427853 28427885 -576771 + (CAGCT)n Simple_repeat Simple_repeat 3 34 0 1 801 309 26 0 0 chrUextra 28427885 28427923 -576733 + (GAGAA)n Simple_repeat Simple_repeat 5 42 0 1 801 2021 196 11 11 chrUextra 28428030 28428495 -576161 + SAR_DM Satellite Satellite 541 1005 -467 1 801 4338 2 0 0 chrUextra 28428595 28429067 -575589 + DOC LINE Jockey 2368 2839 -1886 1 801 1992 213 4 11 chrUextra 28429177 28429638 -575018 - DM412 LTR Gypsy -597 6300 5843 1 801 1332 0 0 0 chrUextra 28430311 28430459 -574197 + (TCTA)n Simple_repeat Simple_repeat 2 149 0 1 801 898 9 0 35 chrUextra 28430895 28431008 -573648 + NTS_DM Other Other 25 133 -107 1 801 1518 20 20 20 chrUextra 28431008 28431211 -573445 + NTS_DM Other Other 38 240 0 1 801 1240 21 0 0 chrUextra 28431211 28431355 -573301 + NTS_DM Other Other 1 144 -96 1 801 4299 2 2 4 chrUextra 28431455 28431927 -572729 + SSU-rRNA_Dme rRNA rRNA 983 1453 -542 1 801 4212 4 6 4 chrUextra 28432027 28432499 -572157 + LSU-rRNA_Dme rRNA rRNA 939 1411 -2489 1 801 3701 18 0 61 chrUextra 28432599 28433071 -571585 - FW_DM LINE Jockey -2169 2523 2081 1 801 447 35 0 0 chrUextra 28433171 28433228 -571428 + (TTCTC)n Simple_repeat Simple_repeat 4 60 0 1 801 460 0 3 135 chrUextra 28433268 28433587 -571069 + (CAGAGA)n Simple_repeat Simple_repeat 1 276 0 1 801 221 136 61 0 chrUextra 28433577 28433643 -571013 + GA-rich Low_complexity Low_complexity 5 74 0 1 801 3620 2 0 100 chrUextra 28433743 28434215 -570441 + LSU-rRNA_Dme rRNA rRNA 1711 2135 -1765 1 801 2574 94 31 2 chrUextra 28434321 28434778 -569878 - DMSAT6 Satellite Satellite 0 470 1 1 801 481 30 15 0 chrUextra 28434887 28434953 -569703 + NTS_DM Other Other 67 133 -107 1 801 1488 20 20 25 chrUextra 28434953 28435157 -569499 + NTS_DM Other Other 38 240 0 1 801 1203 8 0 0 chrUextra 28435157 28435290 -569366 + NTS_DM Other Other 1 133 -107 1 801 637 0 0 0 chrUextra 28435290 28435359 -569297 + NTS_DM Other Other 38 106 -134 1 801 212 105 53 0 chrUextra 28435459 28435497 -569159 + GA-rich Low_complexity Low_complexity 2 41 0 1 801 4231 0 0 2 chrUextra 28436031 28436502 -568154 + ROO_I LTR Pao 4863 5332 -2924 1 801 1620 2 0 0 chrUextra 28436602 28437005 -567651 + (GAGAA)n Simple_repeat Simple_repeat 1 403 0 1 801 1548 26 0 4 chrUextra 28437744 28438215 -566441 + (CTTAT)n Simple_repeat Simple_repeat 1 468 0 1 801 2332 158 13 13 chrUextra 28438316 28438785 -565871 + SAR_DM Satellite Satellite 588 1056 -416 1 801 468 0 0 0 chrUextra 28439457 28439509 -565147 + (TTCTC)n Simple_repeat Simple_repeat 4 55 0 1 801 1587 15 4 4 chrUextra 28440028 28440499 -564157 + (TATAA)n Simple_repeat Simple_repeat 1 471 0 1 801 1620 3 0 0 chrUextra 28441172 28441463 -563193 + (TTCTC)n Simple_repeat Simple_repeat 1 291 0 1 801 403 27 116 18 chrUextra 28441520 28441632 -563024 + (TATAA)n Simple_repeat Simple_repeat 2 124 0 1 802 3717 26 4 4 chrUextra 28443449 28443919 -560737 + MAX_I LTR Pao 665 1134 -6780 1 802 1191 73 6 16 chrUextra 28444019 28444201 -560455 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 802 209 79 79 0 chrUextra 28444201 28444239 -560417 + CT-rich Low_complexity Low_complexity 2 42 0 1 802 738 116 41 18 chrUextra 28444268 28444489 -560167 + GA-rich Low_complexity Low_complexity 1 226 0 1 802 956 69 33 29 chrUextra 28444591 28444801 -559855 + (TTCTC)n Simple_repeat Simple_repeat 1 211 0 1 802 1587 9 0 0 chrUextra 28444824 28445057 -559599 + (GAGAA)n Simple_repeat Simple_repeat 1 233 0 1 802 4132 13 0 6 chrUextra 28445159 28445629 -559027 - DOC LINE Jockey -1061 3664 3198 1 802 2547 100 4 35 chrUextra 28445741 28446199 -558457 - DMSAT6 Satellite Satellite -3 467 24 1 802 1482 50 0 0 chrUextra 28446303 28446663 -557993 + (TTCTC)n Simple_repeat Simple_repeat 1 360 0 1 802 474 33 0 0 chrUextra 28446664 28446724 -557932 + (TCTCG)n Simple_repeat Simple_repeat 1 60 0 1 802 339 44 0 0 chrUextra 28446724 28446768 -557888 + (GAGAA)n Simple_repeat Simple_repeat 1 45 0 1 802 1620 0 0 0 chrUextra 28447437 28447906 -556750 + (GAGAA)n Simple_repeat Simple_repeat 1 469 0 1 802 2617 93 19 19 chrUextra 28448006 28448475 -556181 - DMSAT6 Satellite Satellite 0 470 2 1 802 4238 4 0 2 chrUextra 28448575 28449044 -555612 - ROO_I LTR Pao -3719 4537 4070 1 802 1620 2 0 0 chrUextra 28449146 28449613 -555043 + (GAGAA)n Simple_repeat Simple_repeat 1 467 0 1 802 1305 0 0 0 chrUextra 28449713 28449858 -554798 + (GAGAA)n Simple_repeat Simple_repeat 4 148 0 1 802 2321 122 47 13 chrUextra 28450297 28450744 -553912 + DMSAT6 Satellite Satellite 9 470 0 1 802 2569 105 25 11 chrUextra 28450854 28451299 -553357 + DMSAT6 Satellite Satellite 17 467 -3 1 802 2137 108 19 86 chrUextra 28451987 28452452 -552204 + DMSAT6 Satellite Satellite 37 470 0 1 802 2516 92 39 22 chrUextra 28452566 28453023 -551633 + DMSAT6 Satellite Satellite 1 465 -5 1 802 4289 0 2 0 chrUextra 28453691 28454159 -550497 + LSU-rRNA_Dme rRNA rRNA 657 1125 -2775 1 802 4131 4 4 4 chrUextra 28454259 28454723 -549933 + R1_DM LINE R1 3489 3952 -1404 1 802 4244 8 0 2 chrUextra 28454827 28455295 -549361 - R1_DM LINE R1 -2115 3241 2775 1 802 2270 169 7 9 chrUextra 28455403 28455863 -548793 + SAR_DM Satellite Satellite 369 827 -645 1 802 1479 6 0 0 chrUextra 28455965 28456133 -548523 + (GAGAA)n Simple_repeat Simple_repeat 1 168 0 1 802 1620 9 0 0 chrUextra 28456532 28456997 -547659 + (GAGAA)n Simple_repeat Simple_repeat 1 465 0 1 802 4307 0 0 2 chrUextra 28457099 28457566 -547090 + R1_DM LINE R1 2822 3287 -2069 1 802 675 62 0 0 chrUextra 28457669 28457766 -546890 + (CTACT)n Simple_repeat Simple_repeat 4 100 0 1 802 1578 26 0 3 chrUextra 28457766 28458076 -546580 + (TATAA)n Simple_repeat Simple_repeat 1 309 0 1 802 386 39 19 0 chrUextra 28458081 28458133 -546523 + (GAGAA)n Simple_repeat Simple_repeat 5 57 0 1 802 2484 95 26 30 chrUextra 28458233 28458698 -545958 - DMSAT6 Satellite Satellite -7 463 1 1 802 1620 11 0 11 chrUextra 28458800 28459264 -545392 + (TAGA)n Simple_repeat Simple_repeat 1 458 0 1 802 1566 10 0 0 chrUextra 28459934 28460137 -544519 + (CACAA)n Simple_repeat Simple_repeat 1 203 0 1 802 315 0 0 0 chrUextra 28460810 28460845 -543811 + (T)n Simple_repeat Simple_repeat 1 35 0 1 802 1620 17 0 7 chrUextra 28461635 28462046 -542610 + (TTCTC)n Simple_repeat Simple_repeat 1 407 0 1 802 432 0 0 0 chrUextra 28462053 28462101 -542555 + (GAGAA)n Simple_repeat Simple_repeat 5 52 0 1 802 3984 22 0 4 chrUextra 28462201 28462667 -541989 + ROO_I LTR Pao 1255 1718 -6538 1 802 1496 25 0 12 chrUextra 28462768 28463011 -541645 + (TTCTC)n Simple_repeat Simple_repeat 1 240 0 1 802 1491 28 0 0 chrUextra 28463052 28463232 -541424 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 802 1620 19 0 0 chrUextra 28463333 28463644 -541012 + (GAGAA)n Simple_repeat Simple_repeat 1 311 0 1 802 1149 26 7 13 chrUextra 28463644 28463799 -540857 + (TTATA)n Simple_repeat Simple_repeat 5 158 0 1 802 3634 18 0 34 chrUextra 28463899 28464365 -540291 - ROO_I LTR Pao -7467 789 340 1 802 1282 18 0 12 chrUextra 28464534 28464700 -539956 - NTS_DM Other Other -39 201 38 1 802 918 9 0 27 chrUextra 28464700 28464812 -539844 - NTS_DM Other Other -107 133 25 1 802 449 30 0 15 chrUextra 28464864 28464931 -539725 - NTS_DM Other Other -39 201 136 1 802 2763 87 22 11 chrUextra 28466165 28466629 -538027 - DMSAT6 Satellite Satellite 0 470 2 1 802 2499 114 28 9 chrUextra 28467300 28467758 -536898 + DMSAT6 Satellite Satellite 1 467 -3 1 802 2633 86 27 31 chrUextra 28467878 28468322 -536334 - DMSAT6 Satellite Satellite -28 442 1 1 802 793 60 0 49 chrUextra 28468562 28468685 -535971 - NOMAD_LTR LTR Gypsy 0 518 402 1 802 793 63 27 65 chrUextra 28468686 28468872 -535784 + GA-rich Low_complexity Low_complexity 1 179 0 1 802 3155 109 2 2 chrUextra 28468994 28469453 -535203 - HETA LINE telomeric -2896 3185 2727 1 802 1554 11 0 0 chrUextra 28469564 28469744 -534912 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 1 802 1467 4 0 12 chrUextra 28469757 28470015 -534641 + (TCTA)n Simple_repeat Simple_repeat 1 255 0 1 802 3828 13 4 4 chrUextra 28470681 28471145 -533511 - Invader2_I LTR Gypsy -1946 2646 2183 1 802 814 107 41 6 chrUextra 28471251 28471420 -533236 + CT-rich Low_complexity Low_complexity 5 179 0 1 802 683 12 0 12 chrUextra 28471443 28471528 -533128 + (GAGAA)n Simple_repeat Simple_repeat 2 85 0 1 802 1340 39 0 6 chrUextra 28471528 28471708 -532948 + (CGAGA)n Simple_repeat Simple_repeat 2 180 0 1 802 228 100 0 0 chrUextra 28472937 28472967 -531689 - DMSAT6 Satellite Satellite -363 107 78 1 802 1624 0 0 0 chrUextra 28474065 28474238 -530418 - LSU-rRNA_Dme rRNA rRNA -1940 1960 1788 1 802 2124 0 8 4 chrUextra 28474284 28474528 -530128 - LSU-rRNA_Dme rRNA rRNA -2113 1787 1543 1 802 1173 73 0 0 chrUextra 28475192 28475370 -529286 + (CATGT)n Simple_repeat Simple_repeat 1 178 0 1 802 1587 7 0 25 chrUextra 28475370 28475653 -529003 + (CATCT)n Simple_repeat Simple_repeat 1 275 0 1 802 3697 50 2 2 chrUextra 28475753 28476215 -528441 + PROTOP_A DNA P 81 542 -563 1 802 1154 114 0 14 chrUextra 28476321 28476615 -528041 + (CTATT)n Simple_repeat Simple_repeat 1 289 0 1 802 465 50 0 0 chrUextra 28476617 28476677 -527979 + (TTCTC)n Simple_repeat Simple_repeat 1 60 0 1 802 2602 102 18 13 chrUextra 28476883 28477338 -527318 + DMSAT6 Satellite Satellite 1 457 -13 1 802 1171 45 0 87 chrUextra 28477483 28477901 -526755 + (TTGTG)n Simple_repeat Simple_repeat 1 381 0 1 802 23 0 0 0 chrUextra 28478121 28478144 -526512 + AT_rich Low_complexity Low_complexity 1 23 0 1 802 2592 25 0 6 chrUextra 28478144 28478463 -526193 - FW_DM LINE Jockey 0 4692 4376 1 802 1323 50 0 13 chrUextra 28479125 28479587 -525069 + (TTCTC)n Simple_repeat Simple_repeat 1 456 0 1 802 939 9 0 0 chrUextra 28479687 28479795 -524861 + (GAGAA)n Simple_repeat Simple_repeat 2 109 0 1 802 594 0 0 0 chrUextra 28480249 28480315 -524341 + (TTCTC)n Simple_repeat Simple_repeat 1 66 0 1 802 189 94 0 0 chrUextra 28480317 28480349 -524307 + (CGACG)n Simple_repeat Simple_repeat 4 35 0 1 802 1620 22 0 0 chrUextra 28480349 28480708 -523948 + (GAGAA)n Simple_repeat Simple_repeat 1 359 0 1 802 4210 4 0 2 chrUextra 28480811 28481273 -523383 + R1_DM LINE R1 2734 3194 -2162 1 802 2689 89 20 24 chrUextra 28481383 28481834 -522822 + DMSAT6 Satellite Satellite 5 453 -17 1 802 1930 205 9 9 chrUextra 28481935 28482397 -522259 + SAR_DM Satellite Satellite 465 926 -546 1 802 288 0 0 0 chrUextra 28482497 28482529 -522127 + (TTCTC)n Simple_repeat Simple_repeat 3 34 0 1 802 2374 115 11 28 chrUextra 28483060 28483517 -521139 - DMSAT6 Satellite Satellite -13 457 9 1 802 1284 28 0 43 chrUextra 28483619 28483807 -520849 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 802 499 164 40 15 chrUextra 28483807 28484080 -520576 + CT-rich Low_complexity Low_complexity 1 280 0 1 802 2425 98 33 42 chrUextra 28484181 28484639 -520017 + DMSAT6 Satellite Satellite 17 470 0 1 802 2086 179 9 13 chrUextra 28485302 28485755 -518901 + SAR_DM Satellite Satellite 626 1076 -396 1 802 2150 4 0 0 chrUextra 28485863 28486096 -518560 + POGO DNA Pogo 690 922 -1199 1 802 2109 0 0 0 chrUextra 28486093 28486324 -518332 + POGO DNA Pogo 1629 1859 -262 1 802 1274 22 22 27 chrUextra 28486424 28486609 -518047 + NTS_DM Other Other 57 240 0 1 802 1880 13 17 17 chrUextra 28486609 28486849 -517807 + NTS_DM Other Other 1 240 0 1 802 319 28 0 0 chrUextra 28486849 28486885 -517771 + NTS_DM Other Other 1 36 -204 1 802 4012 18 0 11 chrUextra 28486985 28487446 -517210 - FW_DM LINE Jockey -2027 2665 2210 1 802 1620 0 0 0 chrUextra 28487546 28487757 -516899 + (TCTTG)n Simple_repeat Simple_repeat 1 211 0 1 802 1991 4 0 9 chrUextra 28487757 28487983 -516673 + DIVER_LTR LTR Pao 1 224 0 1 802 1515 39 0 2 chrUextra 28488106 28488566 -516090 + (TCTTG)n Simple_repeat Simple_repeat 1 458 0 1 802 4290 2 0 0 chrUextra 28488666 28489126 -515530 + LSU-rRNA_Dme rRNA rRNA 2444 2903 -997 1 802 2423 47 60 0 chrUextra 28489786 28490087 -514569 - PROTOP DNA P -4161 319 1 1 802 306 0 0 0 chrUextra 28490346 28490380 -514276 + (TCTTG)n Simple_repeat Simple_repeat 1 34 0 1 802 218 196 0 21 chrUextra 28490527 28490574 -514082 + (CTCG)n Simple_repeat Simple_repeat 1 46 0 1 802 4045 2 7 7 chrUextra 28492026 28492485 -512171 - LSU-rRNA_Dme rRNA rRNA -2203 1697 1239 1 802 4161 13 0 0 chrUextra 28492585 28493044 -511612 + SSU-rRNA_Dme rRNA rRNA 438 896 -1099 1 802 78 104 0 0 chrUextra 28493149 28493437 -511219 + AT_rich Low_complexity Low_complexity 1 288 0 1 802 1306 12 0 0 chrUextra 28493437 28493603 -511053 - DOC6_DM LINE Jockey 0 4222 4057 1 802 1620 0 0 5 chrUextra 28495381 28495791 -508865 + (TCTA)n Simple_repeat Simple_repeat 1 407 0 1 802 315 0 0 0 chrUextra 28495802 28495837 -508819 + (TCTA)n Simple_repeat Simple_repeat 1 35 0 1 802 1158 148 0 0 chrUextra 28496511 28496947 -507709 + (TA)n Simple_repeat Simple_repeat 1 436 0 1 802 2408 98 9 37 chrUextra 28497057 28497493 -507163 + DMSAT6 Satellite Satellite 44 467 -3 1 802 642 13 0 0 chrUextra 28498173 28498248 -506408 + (GAGAA)n Simple_repeat Simple_repeat 5 79 0 1 802 1144 67 0 11 chrUextra 28498248 28498430 -506226 + (CGAGA)n Simple_repeat Simple_repeat 1 180 0 1 802 1328 22 0 22 chrUextra 28498437 28498621 -506035 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 802 1395 39 0 3 chrUextra 28498731 28499015 -505641 + (TTGTG)n Simple_repeat Simple_repeat 1 283 0 1 802 549 0 0 0 chrUextra 28499015 28499076 -505580 + (CTGTG)n Simple_repeat Simple_repeat 5 65 0 1 802 717 102 0 0 chrUextra 28499080 28499188 -505468 + (CACAA)n Simple_repeat Simple_repeat 3 110 0 1 802 4076 2 4 4 chrUextra 28499292 28499745 -504911 + LSU-rRNA_Dme rRNA rRNA 1004 1456 -2444 1 802 1079 34 27 0 chrUextra 28499848 28499997 -504659 - DMSAT6 Satellite Satellite -64 406 254 1 802 1775 88 30 17 chrUextra 28500000 28500302 -504354 - DMSAT6 Satellite Satellite -5 465 160 1 802 2633 92 29 15 chrUextra 28500402 28500857 -503799 - DMSAT6 Satellite Satellite -1 469 9 1 802 1470 42 0 3 chrUextra 28500960 28501344 -503312 + (TAGA)n Simple_repeat Simple_repeat 1 383 0 1 802 615 14 0 0 chrUextra 28501344 28501416 -503240 + (CGAT)n Simple_repeat Simple_repeat 1 72 0 1 802 525 199 0 0 chrUextra 28501827 28501973 -502683 + (AATAG)n Simple_repeat Simple_repeat 3 148 0 1 802 2466 103 20 14 chrUextra 28502073 28502517 -502139 - DMSAT6 Satellite Satellite -23 447 1 1 802 213 0 0 160 chrUextra 28502699 28502886 -501770 + (CACAA)n Simple_repeat Simple_repeat 4 160 0 1 802 4104 13 2 0 chrUextra 28503742 28504198 -500458 - FW_DM LINE Jockey -753 3939 3483 1 802 1580 0 0 6 chrUextra 28504302 28504483 -500173 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 802 501 94 0 0 chrUextra 28504489 28504574 -500082 + (CAGAA)n Simple_repeat Simple_repeat 2 86 0 1 802 909 118 0 0 chrUextra 28504574 28504752 -499904 + (GAGAA)n Simple_repeat Simple_repeat 2 179 0 1 802 2536 92 26 13 chrUextra 28504854 28505307 -499349 + DMSAT6 Satellite Satellite 6 464 -6 1 802 2433 108 14 14 chrUextra 28505979 28506422 -498234 - DMSAT6 Satellite Satellite 0 470 28 1 802 183 0 128 0 chrUextra 28507078 28507125 -497531 + (TC)n Simple_repeat Simple_repeat 2 54 0 1 802 434 6 10 132 chrUextra 28507134 28507339 -497317 + (TCTCTG)n Simple_repeat Simple_repeat 1 180 0 1 802 1041 75 23 11 chrUextra 28507358 28507534 -497122 + (TTCTC)n Simple_repeat Simple_repeat 2 179 0 1 802 414 53 0 0 chrUextra 28507639 28507696 -496960 + (TTCTC)n Simple_repeat Simple_repeat 5 61 0 1 802 2594 96 20 9 chrUextra 28508198 28508642 -496014 + DMSAT6 Satellite Satellite 9 457 -13 1 802 1587 9 0 2 chrUextra 28508760 28509193 -495463 + (CAGAG)n Simple_repeat Simple_repeat 1 431 0 1 802 4106 0 0 2 chrUextra 28509302 28509758 -494898 - ROO_I LTR Pao -6234 2022 1568 1 802 1593 9 0 15 chrUextra 28509858 28510314 -494342 + (TCTA)n Simple_repeat Simple_repeat 1 449 0 1 802 1407 57 0 0 chrUextra 28510971 28511422 -493234 + (ATAAG)n Simple_repeat Simple_repeat 1 451 0 1 802 2630 87 14 14 chrUextra 28511538 28511979 -492677 + DMSAT6 Satellite Satellite 1 441 -29 1 802 208 144 133 0 chrUextra 28512083 28512173 -492483 + (CAAG)n Simple_repeat Simple_repeat 2 103 0 1 802 306 102 0 141 chrUextra 28512301 28512507 -492149 + A-rich Low_complexity Low_complexity 2 178 0 1 802 2068 12 4 4 chrUextra 28512634 28512875 -491781 - IDEFIX_LTR LTR Gypsy -11 583 343 1 802 1631 45 0 0 chrUextra 28512869 28513089 -491567 - IDEFIX_I LTR Gypsy -334 5294 5075 1 802 879 44 29 29 chrUextra 28513189 28513329 -491327 + NTS_DM Other Other 101 240 0 1 802 1817 25 17 21 chrUextra 28513329 28513570 -491086 + NTS_DM Other Other 1 240 0 1 802 671 14 0 0 chrUextra 28513570 28513643 -491013 + NTS_DM Other Other 1 73 -167 1 802 1254 52 0 24 chrUextra 28513744 28514037 -490619 + (CATAG)n Simple_repeat Simple_repeat 1 285 0 1 802 835 88 0 13 chrUextra 28514049 28514199 -490457 + (CATAG)n Simple_repeat Simple_repeat 1 148 0 1 802 1253 306 9 18 chrUextra 28514301 28514753 -489903 - MICROPIA_I LTR Gypsy -878 3598 3151 1 802 2584 109 18 7 chrUextra 28515419 28515864 -488792 - DMSAT6 Satellite Satellite 0 470 21 1 802 4163 2 0 4 chrUextra 28515964 28516419 -488237 + SSU-rRNA_Dme rRNA rRNA 1244 1696 -299 1 802 2119 174 9 11 chrUextra 28517084 28517527 -487129 - SAR_DM Satellite Satellite -396 1076 635 1 802 782 79 66 18 chrUextra 28517632 28517799 -486857 + CT-rich Low_complexity Low_complexity 5 179 0 1 802 1444 22 0 11 chrUextra 28518194 28518376 -486280 + (AATAG)n Simple_repeat Simple_repeat 1 180 0 1 802 1389 45 0 0 chrUextra 28518391 28518635 -486021 + (AATAG)n Simple_repeat Simple_repeat 1 244 0 1 802 1620 20 0 2 chrUextra 28518735 28519187 -485469 + (GAGAA)n Simple_repeat Simple_repeat 1 451 0 1 802 4194 4 0 0 chrUextra 28519289 28519743 -484913 + LSU-rRNA_Dme rRNA rRNA 2050 2503 -1397 1 802 1109 83 0 6 chrUextra 28519844 28520025 -484631 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 802 1587 6 0 0 chrUextra 28520026 28520206 -484450 + (TCTCG)n Simple_repeat Simple_repeat 1 180 0 1 802 558 99 0 0 chrUextra 28520206 28520297 -484359 + (TTCTC)n Simple_repeat Simple_repeat 4 94 0 1 802 2236 153 26 20 chrUextra 28520397 28520851 -483805 - SAR_DM Satellite Satellite -639 833 377 1 802 582 51 0 0 chrUextra 28520951 28521029 -483627 + (TTCTC)n Simple_repeat Simple_repeat 3 80 0 1 802 2414 101 22 37 chrUextra 28521505 28521959 -482697 - DMSAT6 Satellite Satellite -15 455 9 1 802 1328 51 0 2 chrUextra 28522059 28522510 -482146 + (CTTAT)n Simple_repeat Simple_repeat 1 450 0 1 802 1620 0 0 0 chrUextra 28522868 28523048 -481608 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 802 1554 40 0 2 chrUextra 28523165 28523571 -481085 + (GAAAA)n Simple_repeat Simple_repeat 1 404 0 1 802 333 0 0 0 chrUextra 28523571 28523608 -481048 + (GAGAA)n Simple_repeat Simple_repeat 1 37 0 1 802 2644 73 63 16 chrUextra 28523725 28524171 -480485 + DMSAT6 Satellite Satellite 1 467 -3 1 802 540 0 0 0 chrUextra 28524271 28524331 -480325 + (TTCTC)n Simple_repeat Simple_repeat 2 61 0 1 802 1599 14 0 0 chrUextra 28524356 28524716 -479940 + (GAGAA)n Simple_repeat Simple_repeat 1 360 0 1 802 523 177 28 28 chrUextra 28525953 28526238 -478418 + CT-rich Low_complexity Low_complexity 1 285 0 1 802 385 25 0 135 chrUextra 28526238 28526379 -478277 + T-rich Low_complexity Low_complexity 2 123 0 1 802 2440 113 16 11 chrUextra 28527031 28527480 -477176 - DMSAT6 Satellite Satellite -3 467 17 1 802 653 199 7 52 chrUextra 28527593 28527747 -476909 + HETRP_DM Satellite Satellite 1518 1664 -208 1 802 192 40 0 0 chrUextra 28527910 28527935 -476721 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 802 425 216 0 10 chrUextra 28527935 28528033 -476623 + HETRP_DM Satellite Satellite 1549 1645 -227 1 802 928 9 0 27 chrUextra 28528141 28528253 -476403 + NTS_DM Other Other 25 133 -107 1 802 1199 73 0 6 chrUextra 28528253 28528418 -476238 + NTS_DM Other Other 38 201 -39 1 802 810 19 0 53 chrUextra 28528470 28528584 -476072 + NTS_DM Other Other 25 132 -108 1 802 2389 102 29 16 chrUextra 28529235 28529682 -474974 - DMSAT6 Satellite Satellite -1 469 17 1 802 2434 99 43 16 chrUextra 28529786 28530228 -474428 + DMSAT6 Satellite Satellite 17 470 0 1 802 1745 18 17 22 chrUextra 28530336 28530566 -474090 - NTS_DM Other Other -11 229 1 1 802 1615 23 18 23 chrUextra 28530566 28530786 -473870 - NTS_DM Other Other 0 240 22 1 802 192 0 102 20 chrUextra 28530890 28530939 -473717 + (TC)n Simple_repeat Simple_repeat 2 54 0 1 802 1578 18 0 0 chrUextra 28530949 28531333 -473323 + (GAGAA)n Simple_repeat Simple_repeat 1 384 0 1 802 1448 68 0 18 chrUextra 28531986 28532436 -472220 + (TAGA)n Simple_repeat Simple_repeat 1 441 0 1 802 1737 0 5 0 chrUextra 28532536 28532732 -471924 - DOC LINE Jockey -4512 213 17 1 802 657 0 0 0 chrUextra 28532748 28532821 -471835 + (A)n Simple_repeat Simple_repeat 1 73 0 1 802 293 319 37 0 chrUextra 28532822 28532985 -471671 + I_DM LINE I 1321 1489 -4742 1 802 495 0 0 0 chrUextra 28533636 28533689 -470967 - NTS_DM Other Other -187 53 1 1 802 1986 0 17 13 chrUextra 28533689 28533928 -470728 - NTS_DM Other Other 0 240 1 1 802 864 86 26 26 chrUextra 28533928 28534084 -470572 - NTS_DM Other Other 0 240 85 1 802 1515 43 0 0 chrUextra 28534734 28535183 -469473 + (ATAAG)n Simple_repeat Simple_repeat 1 449 0 1 802 3794 25 0 7 chrUextra 28535283 28535732 -468924 - IDEFIX_I LTR Gypsy -4053 1575 1130 1 802 1497 28 0 0 chrUextra 28535832 28536277 -468379 + (CACAA)n Simple_repeat Simple_repeat 1 445 0 1 802 1487 10 96 5 chrUextra 28536930 28537129 -467527 + LINEJ1_DM LINE Jockey 4804 5020 0 1 802 261 0 0 0 chrUextra 28537129 28537158 -467498 + (A)n Simple_repeat Simple_repeat 1 29 0 1 802 1455 27 0 0 chrUextra 28538030 28538475 -466181 + (TCTA)n Simple_repeat Simple_repeat 1 445 0 1 802 2446 97 54 20 chrUextra 28538578 28539022 -465634 - DMSAT6 Satellite Satellite -3 467 9 1 802 2246 134 20 16 chrUextra 28539123 28539570 -465086 - DMSAT6 Satellite Satellite -17 453 5 1 802 1620 0 0 0 chrUextra 28539671 28540053 -464603 + (GAGAA)n Simple_repeat Simple_repeat 1 382 0 1 802 1425 37 0 0 chrUextra 28540220 28540436 -464220 + (CTTAT)n Simple_repeat Simple_repeat 1 216 0 1 802 1257 64 0 0 chrUextra 28540447 28540666 -463990 + (CTTAT)n Simple_repeat Simple_repeat 1 219 0 1 802 2593 84 20 11 chrUextra 28540768 28541215 -463441 + DMSAT6 Satellite Satellite 5 455 -15 1 802 1620 11 0 0 chrUextra 28541316 28541583 -463073 + (TCTA)n Simple_repeat Simple_repeat 1 267 0 1 802 390 69 0 0 chrUextra 28541890 28541948 -462708 + (CGAGA)n Simple_repeat Simple_repeat 3 60 0 1 802 1620 0 0 0 chrUextra 28541949 28542309 -462347 + (GAGAA)n Simple_repeat Simple_repeat 1 360 0 1 802 3259 3 0 0 chrUextra 28542411 28542758 -461898 - TABOR_LTR LTR Gypsy -159 347 1 1 802 474 155 0 0 chrUextra 28542761 28542858 -461798 + CT-rich Low_complexity Low_complexity 3 99 0 1 802 1500 22 0 0 chrUextra 28542962 28543142 -461514 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 802 330 154 0 0 chrUextra 28543150 28543228 -461428 + GA-rich Low_complexity Low_complexity 4 81 0 1 802 936 131 0 0 chrUextra 28543230 28543405 -461251 + (GAGAA)n Simple_repeat Simple_repeat 4 178 0 1 802 2496 94 18 14 chrUextra 28543511 28543952 -460704 + DMSAT6 Satellite Satellite 9 451 -19 1 802 233 0 0 161 chrUextra 28544057 28544268 -460388 + (CACAA)n Simple_repeat Simple_repeat 4 180 0 1 802 323 204 39 0 chrUextra 28544270 28544373 -460283 + (CAAA)n Simple_repeat Simple_repeat 4 110 0 1 802 1038 0 0 0 chrUextra 28544376 28544499 -460157 - TABOR_LTR LTR Gypsy 0 506 384 1 802 681 95 0 0 chrUextra 28544600 28544716 -459940 + (TAGA)n Simple_repeat Simple_repeat 4 119 0 1 802 1554 23 0 0 chrUextra 28544733 28545046 -459610 + (TAGA)n Simple_repeat Simple_repeat 1 313 0 1 802 598 155 31 26 chrUextra 28545177 28545528 -459128 + CT-rich Low_complexity Low_complexity 1 353 0 1 802 226 269 0 0 chrUextra 28545536 28545588 -459068 + T-rich Low_complexity Low_complexity 1 52 0 1 802 3171 2 81 60 chrUextra 28545693 28546140 -458516 - ROO_I LTR Pao -7396 860 405 1 802 2486 82 38 20 chrUextra 28546240 28546687 -457969 + DMSAT6 Satellite Satellite 1 455 -15 1 802 4005 2 2 7 chrUextra 28546787 28547233 -457423 - LSU-rRNA_Dme rRNA rRNA -2487 1413 970 1 802 1956 0 17 17 chrUextra 28547341 28547581 -457075 + NTS_DM Other Other 1 240 0 1 802 1759 0 0 0 chrUextra 28547581 28547779 -456877 + NTS_DM Other Other 1 198 -42 1 802 4041 2 5 2 chrUextra 28547879 28548324 -456332 + SSU-rRNA_Dme rRNA rRNA 1139 1584 -411 1 802 606 96 0 0 chrUextra 28548424 28548528 -456128 + (CTTAT)n Simple_repeat Simple_repeat 3 106 0 1 802 617 63 0 10 chrUextra 28548558 28548654 -456002 + (CAGAT)n Simple_repeat Simple_repeat 5 99 0 1 802 987 84 0 17 chrUextra 28548665 28548846 -455810 + (ATAAG)n Simple_repeat Simple_repeat 1 178 0 1 802 1533 23 0 2 chrUextra 28548969 28549414 -455242 + (TCTA)n Simple_repeat Simple_repeat 1 443 0 1 802 1169 39 0 42 chrUextra 28549519 28549959 -454697 + (CACAA)n Simple_repeat Simple_repeat 1 421 0 1 802 1260 24 0 18 chrUextra 28550059 28550230 -454426 + (TCTA)n Simple_repeat Simple_repeat 3 170 0 1 802 189 26 79 0 chrUextra 28550241 28550279 -454377 + (CTATG)n Simple_repeat Simple_repeat 1 41 0 1 802 882 67 0 48 chrUextra 28550292 28550479 -454177 + (TCTA)n Simple_repeat Simple_repeat 2 179 0 1 802 379 22 0 160 chrUextra 28550603 28550859 -453797 + CT-rich Low_complexity Low_complexity 1 214 0 1 802 237 3 5 155 chrUextra 28551696 28552088 -452568 + (TTGTG)n Simple_repeat Simple_repeat 1 333 0 1 802 1381 39 0 5 chrUextra 28552777 28553220 -451436 + (TAGA)n Simple_repeat Simple_repeat 1 441 0 1 802 1997 85 18 9 chrUextra 28553321 28553652 -451004 + DMSAT6 Satellite Satellite 105 438 -32 1 802 504 45 0 0 chrUextra 28553863 28553930 -450726 + (TTCTC)n Simple_repeat Simple_repeat 5 71 0 1 802 1764 18 17 22 chrUextra 28554947 28555179 -449477 - NTS_DM Other Other -9 231 1 1 802 1573 19 19 19 chrUextra 28555179 28555389 -449267 - NTS_DM Other Other 0 240 31 1 802 1314 78 0 0 chrUextra 28555489 28555669 -448987 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 802 1124 111 0 6 chrUextra 28555669 28555850 -448806 + (TTTTC)n Simple_repeat Simple_repeat 1 180 0 1 802 579 53 0 0 chrUextra 28555851 28555926 -448730 + (TTTCC)n Simple_repeat Simple_repeat 1 75 0 1 802 1587 6 0 0 chrUextra 28556031 28556211 -448445 + (TCTTG)n Simple_repeat Simple_repeat 1 180 0 1 802 621 106 0 0 chrUextra 28556211 28556324 -448332 + (TTCTC)n Simple_repeat Simple_repeat 5 117 0 1 802 963 25 0 0 chrUextra 28556330 28556448 -448208 + (GAGAA)n Simple_repeat Simple_repeat 1 118 0 1 802 1620 5 0 2 chrUextra 28556573 28557015 -447641 + (GAGAA)n Simple_repeat Simple_repeat 1 441 0 1 802 234 0 0 0 chrUextra 28557115 28557141 -447515 + (TTCTC)n Simple_repeat Simple_repeat 1 26 0 1 802 264 30 0 0 chrUextra 28557141 28557173 -447483 + (CGCTG)n Simple_repeat Simple_repeat 1 33 0 1 802 1620 15 0 0 chrUextra 28557173 28557437 -447219 + (GAGAA)n Simple_repeat Simple_repeat 1 264 0 1 802 952 57 16 59 chrUextra 28557671 28557858 -446798 + (TTCTC)n Simple_repeat Simple_repeat 1 179 0 1 802 636 128 0 53 chrUextra 28557887 28558077 -446579 + GA-rich Low_complexity Low_complexity 1 180 0 1 802 2100 117 16 52 chrUextra 28558738 28559179 -445477 - DMSAT6 Satellite Satellite -34 436 12 1 802 4088 5 0 0 chrUextra 28559819 28560259 -444397 + LSU-rRNA_Dme rRNA rRNA 3057 3496 -404 1 802 1524 59 8 8 chrUextra 28560370 28560730 -443926 + (TTCTC)n Simple_repeat Simple_repeat 1 360 0 1 802 288 69 86 0 chrUextra 28560730 28560788 -443868 + CT-rich Low_complexity Low_complexity 5 67 0 1 802 532 119 36 0 chrUextra 28561040 28561124 -443532 - NTS_DM Other Other -150 90 4 1 802 763 10 0 29 chrUextra 28561234 28561339 -443317 - NTS_DM Other Other -78 162 61 1 802 1509 11 0 0 chrUextra 28561439 28561614 -443042 + (CACAA)n Simple_repeat Simple_repeat 5 179 0 1 802 1476 34 0 0 chrUextra 28561616 28561794 -442862 + (TCTTG)n Simple_repeat Simple_repeat 3 180 0 1 802 689 0 0 12 chrUextra 28561796 28561878 -442778 + (TCTCG)n Simple_repeat Simple_repeat 5 85 0 1 802 1571 12 0 2 chrUextra 28561978 28562417 -442239 + (TTCTC)n Simple_repeat Simple_repeat 1 437 0 1 802 1587 37 0 0 chrUextra 28562518 28562955 -441701 + (CTTAT)n Simple_repeat Simple_repeat 1 437 0 1 802 1701 54 404 0 chrUextra 28564134 28564374 -440282 + G2_DM LINE Jockey 2192 2528 -574 1 802 1035 23 0 0 chrUextra 28564415 28564544 -440112 + G2_DM LINE Jockey 2967 3095 -7 1 802 1276 34 0 10 chrUextra 28565212 28565521 -439135 + (TTATA)n Simple_repeat Simple_repeat 1 305 0 1 802 597 114 0 0 chrUextra 28565535 28565649 -439007 + (TTCTC)n Simple_repeat Simple_repeat 3 116 0 1 802 3448 40 2 18 chrUextra 28566827 28567265 -437391 + Gypsy12_LTR LTR Gypsy 1169 1599 -737 1 802 1620 0 0 0 chrUextra 28567365 28567545 -437111 + (ATCG)n Simple_repeat Simple_repeat 1 180 0 1 802 1521 17 0 0 chrUextra 28567571 28567803 -436853 + (TCTA)n Simple_repeat Simple_repeat 1 232 0 1 802 460 15 0 137 chrUextra 28567936 28568251 -436405 + (TCTCTG)n Simple_repeat Simple_repeat 1 272 0 1 802 292 23 128 0 chrUextra 28568251 28568337 -436319 + CT-rich Low_complexity Low_complexity 2 98 0 1 802 585 0 0 0 chrUextra 28568441 28568506 -436150 + (ACTAG)n Simple_repeat Simple_repeat 5 69 0 1 802 1620 0 0 0 chrUextra 28568509 28568869 -435787 + (GAGAA)n Simple_repeat Simple_repeat 1 360 0 1 802 2227 110 31 16 chrUextra 28568982 28569407 -435249 + DMSAT6 Satellite Satellite 31 461 -9 1 802 293 12 0 129 chrUextra 28570055 28570148 -434508 + (TTTTTA)n Simple_repeat Simple_repeat 3 83 0 1 802 1620 0 0 0 chrUextra 28570592 28570886 -433770 + (CAAGA)n Simple_repeat Simple_repeat 1 294 0 1 802 3907 2 5 5 chrUextra 28571128 28571564 -433092 - LSU-rRNA_Dme rRNA rRNA -2160 1740 1305 1 802 1269 0 0 0 chrUextra 28571664 28571805 -432851 + (GAGAA)n Simple_repeat Simple_repeat 4 144 0 1 802 1599 2 0 0 chrUextra 28572200 28572636 -432020 + (GAGAA)n Simple_repeat Simple_repeat 1 436 0 1 802 3943 5 0 2 chrUextra 28572736 28573171 -431485 - R1_DM LINE R1 -171 5185 4752 1 803 1620 0 0 0 chrUextra 28573806 28574210 -430446 + (GAGAA)n Simple_repeat Simple_repeat 1 404 0 1 803 1587 32 9 31 chrUextra 28574341 28574567 -430089 - NTS_DM Other Other -19 221 1 1 803 1538 20 19 24 chrUextra 28574567 28574776 -429880 - NTS_DM Other Other 0 240 33 1 803 476 45 0 137 chrUextra 28574885 28575090 -429566 + T-rich Low_complexity Low_complexity 2 178 0 1 803 687 114 30 34 chrUextra 28575413 28575650 -429006 + CT-rich Low_complexity Low_complexity 1 235 0 1 803 1408 22 0 11 chrUextra 28575650 28575832 -428824 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 803 1016 93 0 7 chrUextra 28576230 28576381 -428275 + (TCTCC)n Simple_repeat Simple_repeat 3 152 0 1 803 612 90 74 15 chrUextra 28577016 28577345 -427311 + GA-rich Low_complexity Low_complexity 1 348 0 1 803 1620 0 0 0 chrUextra 28578094 28578274 -426382 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 803 1488 24 0 0 chrUextra 28578619 28578875 -425781 + (CATAG)n Simple_repeat Simple_repeat 1 256 0 1 803 1263 57 0 0 chrUextra 28578875 28579052 -425604 + (AATAG)n Simple_repeat Simple_repeat 3 179 0 1 803 725 0 0 12 chrUextra 28579152 28579238 -425418 + (GAGAA)n Simple_repeat Simple_repeat 2 86 0 1 803 1620 9 0 2 chrUextra 28579689 28580118 -424538 + (TTCTCC)n Simple_repeat Simple_repeat 1 428 0 1 803 248 131 234 0 chrUextra 28580301 28580438 -424218 + (CTAAA)n Simple_repeat Simple_repeat 5 173 0 1 803 288 333 0 0 chrUextra 28580454 28580628 -424028 + (TAAG)n Simple_repeat Simple_repeat 4 177 0 1 803 449 34 17 0 chrUextra 28580755 28580814 -423842 + (TTCTC)n Simple_repeat Simple_repeat 5 64 0 1 803 614 142 56 6 chrUextra 28580827 28581168 -423488 + GA-rich Low_complexity Low_complexity 1 357 0 1 803 519 31 0 0 chrUextra 28581817 28581882 -422774 + (TTCTC)n Simple_repeat Simple_repeat 5 69 0 1 803 1620 16 0 0 chrUextra 28581882 28582249 -422407 + (GAGAA)n Simple_repeat Simple_repeat 1 367 0 1 803 1488 30 0 0 chrUextra 28582351 28582781 -421875 + (CACAA)n Simple_repeat Simple_repeat 1 430 0 1 803 1620 26 0 0 chrUextra 28582881 28583299 -421357 + (TTCTC)n Simple_repeat Simple_repeat 1 418 0 1 803 214 17 20 139 chrUextra 28583423 28583624 -421032 + (TTGTG)n Simple_repeat Simple_repeat 4 180 0 1 803 879 102 0 0 chrUextra 28583672 28583800 -420856 + (TTGTG)n Simple_repeat Simple_repeat 3 130 0 1 803 315 71 0 0 chrUextra 28583802 28583844 -420812 + (CTACG)n Simple_repeat Simple_repeat 4 45 0 1 803 1041 119 0 0 chrUextra 28583947 28584375 -420281 + (CATGT)n Simple_repeat Simple_repeat 1 428 0 1 803 1620 0 0 0 chrUextra 28584492 28584672 -419984 + (AGATG)n Simple_repeat Simple_repeat 1 180 0 1 803 1578 5 0 0 chrUextra 28584684 28584906 -419750 + (AGATG)n Simple_repeat Simple_repeat 1 222 0 1 803 384 40 0 0 chrUextra 28585006 28585056 -419600 + (TTCTC)n Simple_repeat Simple_repeat 1 50 0 1 803 1599 15 0 0 chrUextra 28585085 28585417 -419239 + (GAGAA)n Simple_repeat Simple_repeat 1 332 0 1 803 1355 34 0 6 chrUextra 28586072 28586250 -418406 + (ATAAG)n Simple_repeat Simple_repeat 1 177 0 1 803 1449 36 0 0 chrUextra 28586272 28586498 -418158 + (ATAAG)n Simple_repeat Simple_repeat 1 226 0 1 803 426 0 0 0 chrUextra 28586600 28586647 -418009 - TABOR_LTR LTR Gypsy -459 47 1 1 803 694 0 0 0 chrUextra 28586645 28586748 -417908 - TABOR_I LTR Gypsy 0 6336 6234 1 803 22 35 0 0 chrUextra 28586748 28586777 -417879 + AT_rich Low_complexity Low_complexity 1 29 0 1 803 288 0 0 0 chrUextra 28586865 28586897 -417759 + (T)n Simple_repeat Simple_repeat 1 32 0 1 803 1620 16 0 0 chrUextra 28587130 28587380 -417276 + (TTCTC)n Simple_repeat Simple_repeat 1 250 0 1 803 1084 60 0 12 chrUextra 28587390 28587558 -417098 + (GAGAA)n Simple_repeat Simple_repeat 2 167 0 1 803 1462 22 0 0 chrUextra 28587658 28587840 -416816 + FW_DM LINE Jockey 4511 4692 0 1 803 180 0 0 0 chrUextra 28587840 28587860 -416796 + (A)n Simple_repeat Simple_repeat 1 20 0 1 803 1620 7 0 0 chrUextra 28588189 28588617 -416039 + (TTGTG)n Simple_repeat Simple_repeat 1 428 0 1 803 1887 188 19 7 chrUextra 28588725 28589144 -415512 - SAR_DM Satellite Satellite -411 1061 638 1 803 3795 5 0 7 chrUextra 28589246 28589675 -414981 - R1_DM LINE R1 -3637 1719 1294 1 803 953 65 5 14 chrUextra 28589775 28590204 -414452 + RSP Satellite Satellite 1 425 0 1 803 3402 28 5 5 chrUextra 28590304 28590733 -413923 - BURDOCK_I LTR Gypsy -536 5324 4896 1 803 1825 196 9 12 chrUextra 28590833 28591262 -413394 - SAR_DM Satellite Satellite -396 1076 649 1 803 1464 39 0 0 chrUextra 28591362 28591541 -413115 + (TCTTG)n Simple_repeat Simple_repeat 2 180 0 1 803 1620 0 0 0 chrUextra 28591548 28591728 -412928 + (CTTAT)n Simple_repeat Simple_repeat 1 180 0 1 803 376 34 0 33 chrUextra 28591731 28591791 -412865 + (TATCG)n Simple_repeat Simple_repeat 3 60 0 1 803 2301 97 7 37 chrUextra 28591891 28592319 -412337 - DMSAT6 Satellite Satellite -39 431 17 1 803 219 36 0 0 chrUextra 28592421 28592449 -412207 + (TTCTC)n Simple_repeat Simple_repeat 4 31 0 1 803 650 134 40 23 chrUextra 28592484 28592660 -411996 + GA-rich Low_complexity Low_complexity 1 179 0 1 803 804 104 40 17 chrUextra 28592672 28592848 -411808 + GA-rich Low_complexity Low_complexity 1 180 0 1 803 346 10 136 0 chrUextra 28592997 28593100 -411556 + (TC)n Simple_repeat Simple_repeat 2 118 0 1 803 565 142 59 6 chrUextra 28593088 28593258 -411398 + CT-rich Low_complexity Low_complexity 1 179 0 1 803 359 126 47 28 chrUextra 28593272 28593378 -411278 + CT-rich Low_complexity Low_complexity 2 109 0 1 803 2196 12 108 5 chrUextra 28593478 28593906 -410750 + FW_DM LINE Jockey 1731 2202 -2490 1 803 1587 8 0 0 chrUextra 28594539 28594947 -409709 + (TTCTCC)n Simple_repeat Simple_repeat 1 408 0 1 803 3417 5 0 16 chrUextra 28595062 28595490 -409166 - ROO_I LTR Pao -161 8095 7675 1 803 334 0 7 131 chrUextra 28595593 28595738 -408918 + (CAGAGA)n Simple_repeat Simple_repeat 6 132 0 1 803 577 142 59 6 chrUextra 28595729 28595899 -408757 + GA-rich Low_complexity Low_complexity 1 179 0 1 803 436 0 137 0 chrUextra 28595894 28596018 -408638 + (GA)n Simple_repeat Simple_repeat 2 142 0 1 803 1202 43 0 0 chrUextra 28596118 28596282 -408374 + DOC LINE Jockey 4562 4725 0 1 803 189 0 0 0 chrUextra 28596282 28596303 -408353 + (A)n Simple_repeat Simple_repeat 1 21 0 1 803 698 270 8 4 chrUextra 28596304 28596546 -408110 + Copia_I LTR Copia 1527 1769 -2824 1 803 2479 101 26 2 chrUextra 28596646 28597071 -407585 - DMSAT6 Satellite Satellite -19 451 17 1 803 1587 29 0 0 chrUextra 28597186 28597466 -407190 + (GAGAA)n Simple_repeat Simple_repeat 1 280 0 1 803 617 92 69 0 chrUextra 28597467 28597598 -407058 + GA-rich Low_complexity Low_complexity 5 144 0 1 803 1587 8 0 0 chrUextra 28597702 28597938 -406718 + (TAGA)n Simple_repeat Simple_repeat 1 236 0 1 803 1014 97 0 0 chrUextra 28597938 28598112 -406544 + (ATCG)n Simple_repeat Simple_repeat 2 176 0 1 803 483 13 88 44 chrUextra 28598230 28598390 -406266 + (GA)n Simple_repeat Simple_repeat 2 168 0 1 803 590 151 41 16 chrUextra 28598415 28598656 -406000 + GA-rich Low_complexity Low_complexity 1 246 0 1 803 782 12 0 0 chrUextra 28598758 28598843 -405813 - NTS_DM Other Other -155 85 1 1 803 1728 47 17 17 chrUextra 28598843 28599083 -405573 - NTS_DM Other Other 0 240 1 1 803 308 113 68 40 chrUextra 28599086 28599160 -405496 - NTS_DM Other Other -3 237 162 1 803 1191 181 7 12 chrUextra 28599286 28599505 -405151 + SAR_DM Satellite Satellite 1 345 -632 1 803 994 120 0 0 chrUextra 28599505 28599663 -404993 - ARS406_DM Unknown Unknown -195 158 1 1 803 1191 181 7 12 chrUextra 28599663 28599708 -404948 + SAR_DM Satellite Satellite 346 419 -558 1 803 3467 24 2 5 chrUextra 28599813 28600240 -404416 + ROO_I LTR Pao 4606 5031 -3225 1 803 2069 122 26 26 chrUextra 28600344 28600766 -403890 - DMSAT6 Satellite Satellite -48 422 1 1 803 292 148 136 0 chrUextra 28601568 28601723 -402933 + (TAGA)n Simple_repeat Simple_repeat 3 178 0 1 803 1347 45 0 0 chrUextra 28601921 28602100 -402556 + (TTCTC)n Simple_repeat Simple_repeat 2 180 0 1 803 354 100 0 0 chrUextra 28602100 28602160 -402496 + (TTCTG)n Simple_repeat Simple_repeat 2 61 0 1 803 1540 0 0 11 chrUextra 28602161 28602343 -402313 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 803 3834 9 2 2 chrUextra 28602447 28602873 -401783 - SSU-rRNA_Dme rRNA rRNA -731 1264 839 1 803 1302 78 0 0 chrUextra 28604026 28604206 -400450 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 803 996 124 11 11 chrUextra 28604209 28604388 -400268 + (TCTCC)n Simple_repeat Simple_repeat 2 180 0 1 803 329 145 16 0 chrUextra 28604388 28604450 -400206 + CT-rich Low_complexity Low_complexity 3 65 0 1 803 1082 23 0 8 chrUextra 28604841 28604975 -399681 + (CAAGA)n Simple_repeat Simple_repeat 2 134 0 1 803 1620 3 0 0 chrUextra 28605075 28605405 -399251 + (TTCTC)n Simple_repeat Simple_repeat 1 330 0 1 803 219 36 0 0 chrUextra 28605405 28605433 -399223 + (CAGCT)n Simple_repeat Simple_repeat 2 29 0 1 803 585 0 0 0 chrUextra 28605435 28605500 -399156 + (GAGAA)n Simple_repeat Simple_repeat 5 69 0 1 803 1620 0 0 0 chrUextra 28605604 28605806 -398850 + (GAGAA)n Simple_repeat Simple_repeat 1 202 0 1 803 1344 10 0 43 chrUextra 28605815 28606025 -398631 + (TATAA)n Simple_repeat Simple_repeat 1 201 0 1 803 1547 47 0 2 chrUextra 28606142 28606550 -398106 + (CTTAT)n Simple_repeat Simple_repeat 1 406 0 1 803 34 24 0 0 chrUextra 28606867 28606908 -397748 + AT_rich Low_complexity Low_complexity 1 41 0 1 803 3682 2 2 2 chrUextra 28607175 28607600 -397056 - ROO_I LTR Pao -4751 3505 3081 1 803 342 138 0 0 chrUextra 28607701 28607759 -396897 + (CTG)n Simple_repeat Simple_repeat 2 59 0 1 803 2577 27 0 74 chrUextra 28607759 28608125 -396531 - ROO_I LTR Pao -7618 638 300 1 803 417 176 66 0 chrUextra 28608225 28608361 -396295 + T-rich Low_complexity Low_complexity 2 146 0 1 803 555 121 59 24 chrUextra 28608362 28608531 -396125 + CT-rich Low_complexity Low_complexity 5 179 0 1 803 333 0 0 0 chrUextra 28608750 28608787 -395869 + (TTCTC)n Simple_repeat Simple_repeat 5 41 0 1 803 1620 8 0 0 chrUextra 28608801 28609161 -395495 + (GAGAA)n Simple_repeat Simple_repeat 1 360 0 1 803 1620 5 0 2 chrUextra 28609799 28610206 -394450 + (TTCTCC)n Simple_repeat Simple_repeat 1 406 0 1 803 1997 188 5 9 chrUextra 28610323 28610747 -393909 - SAR_DM Satellite Satellite -535 937 516 1 803 1314 81 0 0 chrUextra 28610857 28611271 -393385 + (TTCTC)n Simple_repeat Simple_repeat 1 414 0 1 803 534 16 0 0 chrUextra 28611371 28611434 -393222 + (TTCTC)n Simple_repeat Simple_repeat 2 64 0 1 803 1506 48 0 0 chrUextra 28611443 28611795 -392861 + (GAGAA)n Simple_repeat Simple_repeat 1 352 0 1 803 458 17 17 0 chrUextra 28611895 28611955 -392701 + NTS_DM Other Other 73 133 -107 1 803 813 31 0 0 chrUextra 28611955 28612051 -392605 + NTS_DM Other Other 38 133 -107 1 803 1461 40 20 20 chrUextra 28612051 28612254 -392402 + NTS_DM Other Other 38 240 0 1 803 535 47 0 0 chrUextra 28612254 28612318 -392338 + NTS_DM Other Other 1 64 -176 1 803 678 171 41 0 chrUextra 28612420 28612543 -392113 - IDEFIX_I LTR Gypsy -701 4927 4800 1 803 1518 138 96 10 chrUextra 28612548 28612841 -391815 - MDG1_LTR LTR Gypsy -30 412 95 1 803 588 14 0 0 chrUextra 28612941 28613010 -391646 + (TTCTC)n Simple_repeat Simple_repeat 1 69 0 1 803 1599 6 0 0 chrUextra 28613019 28613339 -391317 + (GAGAA)n Simple_repeat Simple_repeat 1 320 0 1 803 449 164 0 0 chrUextra 28613464 28613582 -391074 + (CAGAGA)n Simple_repeat Simple_repeat 1 118 0 1 803 233 0 0 161 chrUextra 28613595 28613806 -390850 + (CAAGA)n Simple_repeat Simple_repeat 2 178 0 1 803 465 139 0 25 chrUextra 28613806 28613887 -390769 + A-rich Low_complexity Low_complexity 4 82 0 1 803 963 93 0 0 chrUextra 28613988 28614150 -390506 + (CGAT)n Simple_repeat Simple_repeat 3 164 0 1 803 1620 8 0 4 chrUextra 28614150 28614410 -390246 + (TCTA)n Simple_repeat Simple_repeat 1 259 0 1 803 1810 10 0 0 chrUextra 28614510 28614707 -389949 + LSU-rRNA_Dme rRNA rRNA 3704 3900 0 1 803 266 196 0 19 chrUextra 28614808 28614860 -389796 + LSU-rRNA_Dme rRNA rRNA 2570 2620 -1280 1 803 1050 93 0 5 chrUextra 28615038 28615449 -389207 + (CGAAG)n Simple_repeat Simple_repeat 1 408 0 1 803 603 191 0 0 chrUextra 28615554 28615711 -388945 + (CTATT)n Simple_repeat Simple_repeat 3 159 0 1 803 319 160 42 11 chrUextra 28616606 28616701 -387955 + CT-rich Low_complexity Low_complexity 2 99 0 1 803 1620 6 0 0 chrUextra 28617669 28617993 -386663 + (GAGAA)n Simple_repeat Simple_repeat 1 324 0 1 803 1386 12 0 0 chrUextra 28618164 28618324 -386332 + (TTGTG)n Simple_repeat Simple_repeat 3 162 0 1 803 861 77 226 16 chrUextra 28618325 28618568 -386088 - PROTOP_B DNA P -507 646 353 1 803 1620 8 0 0 chrUextra 28618686 28619080 -385576 + (GAGAA)n Simple_repeat Simple_repeat 1 394 0 1 803 1620 0 0 0 chrUextra 28619729 28619936 -384720 + (TAGA)n Simple_repeat Simple_repeat 1 207 0 1 803 279 259 0 0 chrUextra 28619960 28620126 -384530 + (TAGA)n Simple_repeat Simple_repeat 1 166 0 1 803 2482 82 17 12 chrUextra 28620253 28620671 -383985 - DMSAT6 Satellite Satellite -29 441 22 1 803 822 34 10 101 chrUextra 28620772 28620970 -383686 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 803 206 154 0 25 chrUextra 28620973 28620993 -383663 + polypurine Low_complexity Low_complexity 5 24 0 1 803 1319 45 0 6 chrUextra 28620993 28621173 -383483 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 803 206 154 0 25 chrUextra 28621173 28621192 -383464 + polypurine Low_complexity Low_complexity 25 43 0 1 803 1620 17 0 0 chrUextra 28621292 28621713 -382943 + (GAGAA)n Simple_repeat Simple_repeat 1 421 0 1 803 3719 0 0 2 chrUextra 28622334 28622734 -381922 - LSU-rRNA_Dme rRNA rRNA -1714 2186 1788 1 803 444 19 0 0 chrUextra 28623894 28623947 -380709 + (TTCTC)n Simple_repeat Simple_repeat 5 57 0 1 803 1620 9 0 0 chrUextra 28623956 28624296 -380360 + (GAGAA)n Simple_repeat Simple_repeat 1 340 0 1 803 1620 51 0 0 chrUextra 28624936 28625354 -379302 + (TTCTC)n Simple_repeat Simple_repeat 1 418 0 1 803 1620 0 0 0 chrUextra 28625993 28626353 -378303 + (GAGAA)n Simple_repeat Simple_repeat 1 360 0 1 803 642 55 102 0 chrUextra 28628054 28628467 -376189 + (TTA)n Simple_repeat Simple_repeat 1 454 0 1 803 480 249 12 3 chrUextra 28628569 28628907 -375749 + (CAAA)n Simple_repeat Simple_repeat 1 340 0 1 803 951 27 0 9 chrUextra 28629605 28629717 -374939 + ACCORD2_I LTR Gypsy 1257 1367 -5845 1 803 874 37 65 124 chrUextra 28629791 28629977 -374679 + ACCORD2_I LTR Gypsy 1507 1681 -5531 1 803 270 79 53 0 chrUextra 28629985 28630023 -374633 + Gypsy12_I LTR Gypsy 4446 4485 -1061 1 803 510 0 58 23 chrUextra 28630123 28630210 -374446 + (TAA)n Simple_repeat Simple_repeat 3 92 0 1 803 2503 16 0 21 chrUextra 28630210 28630540 -374116 - HMSBEAGLE_I LTR Gypsy -5733 796 474 1 803 1481 32 0 2 chrUextra 28630640 28631053 -373603 + (CACAA)n Simple_repeat Simple_repeat 1 411 0 1 803 1545 31 0 0 chrUextra 28631157 28631540 -373116 + (CACAT)n Simple_repeat Simple_repeat 1 383 0 1 803 2467 75 27 2 chrUextra 28631674 28632078 -372578 + DMSAT6 Satellite Satellite 29 442 -28 1 803 971 77 0 6 chrUextra 28632191 28632347 -372309 + (TTCTC)n Simple_repeat Simple_repeat 5 159 0 1 803 855 0 0 0 chrUextra 28632347 28632442 -372214 + (ATCTG)n Simple_repeat Simple_repeat 2 96 0 1 803 1050 55 0 18 chrUextra 28632442 28632608 -372048 + (GAGAA)n Simple_repeat Simple_repeat 1 163 0 1 803 1136 41 0 7 chrUextra 28633224 28633371 -371285 + (CAAGA)n Simple_repeat Simple_repeat 1 146 0 1 803 1029 57 0 0 chrUextra 28633396 28633537 -371119 + (CAAGA)n Simple_repeat Simple_repeat 2 142 0 1 803 1314 50 0 0 chrUextra 28634256 28634435 -370221 + (GAGAA)n Simple_repeat Simple_repeat 2 180 0 1 803 1400 39 0 4 chrUextra 28634435 28634667 -369989 + (ATAAG)n Simple_repeat Simple_repeat 1 231 0 1 803 1955 183 10 7 chrUextra 28634775 28635187 -369469 - SAR_DM Satellite Satellite -514 958 546 1 803 387 0 0 0 chrUextra 28635287 28635330 -369326 + (TTCTC)n Simple_repeat Simple_repeat 3 45 0 1 803 450 0 0 0 chrUextra 28635330 28635379 -369277 + (CGCTG)n Simple_repeat Simple_repeat 1 50 0 1 803 1448 39 0 3 chrUextra 28635382 28635702 -368954 + (AGATG)n Simple_repeat Simple_repeat 1 318 0 1 803 1620 2 0 0 chrUextra 28635804 28636208 -368448 + (TCTA)n Simple_repeat Simple_repeat 1 404 0 1 803 385 0 0 167 chrUextra 28636320 28636536 -368120 + (CATCT)n Simple_repeat Simple_repeat 1 180 0 1 803 344 0 0 161 chrUextra 28636549 28636729 -367927 + (CATCT)n Simple_repeat Simple_repeat 1 151 0 1 803 2340 10 75 10 chrUextra 28636832 28637125 -367531 - PROTOP_A DNA P -163 942 631 1 803 878 21 0 0 chrUextra 28637123 28637220 -367436 - PROTOP_A DNA P -1008 97 1 1 803 254 0 0 0 chrUextra 28637220 28637247 -367409 + PROTOP_B DNA P 26 52 -1101 1 803 1888 184 17 10 chrUextra 28637350 28637761 -366895 - SAR_DM Satellite Satellite -513 959 546 1 803 1557 20 0 2 chrUextra 28637863 28638276 -366380 + (TCTTG)n Simple_repeat Simple_repeat 1 411 0 1 803 1547 10 0 7 chrUextra 28638376 28638790 -365866 + (TCTA)n Simple_repeat Simple_repeat 1 410 0 1 803 577 142 59 6 chrUextra 28638891 28639061 -365595 + GA-rich Low_complexity Low_complexity 1 179 0 1 803 546 0 136 0 chrUextra 28639056 28639210 -365446 + (GA)n Simple_repeat Simple_repeat 2 176 0 1 803 1419 6 0 0 chrUextra 28639404 28639564 -365092 + (TTATA)n Simple_repeat Simple_repeat 1 160 0 1 803 2197 8 0 4 chrUextra 28639574 28639818 -364838 + FW_DM LINE Jockey 1 243 -4449 1 803 36 0 0 0 chrUextra 28640432 28640468 -364188 + AT_rich Low_complexity Low_complexity 1 36 0 1 803 223 37 0 0 chrUextra 28640439 28640739 -363917 + AT_rich Low_complexity Low_complexity 1 300 0 1 803 257 14 0 0 chrUextra 28640561 28640846 -363810 + AT_rich Low_complexity Low_complexity 1 285 0 1 803 723 156 0 0 chrUextra 28640951 28641130 -363526 + (CAGAGA)n Simple_repeat Simple_repeat 2 180 0 1 803 222 163 0 39 chrUextra 28641130 28641161 -363495 + polypurine Low_complexity Low_complexity 4 32 0 1 803 1044 151 0 0 chrUextra 28641161 28641340 -363316 + GA-rich Low_complexity Low_complexity 2 180 0 1 803 222 163 0 39 chrUextra 28641340 28641359 -363297 + polypurine Low_complexity Low_complexity 33 51 0 1 803 1620 0 0 0 chrUextra 28641463 28641823 -362833 + (GAGAA)n Simple_repeat Simple_repeat 1 360 0 1 803 1620 70 0 3 chrUextra 28641972 28642330 -362326 + (GAGAA)n Simple_repeat Simple_repeat 1 356 0 1 803 223 236 0 0 chrUextra 28642330 28642385 -362271 + (AGATG)n Simple_repeat Simple_repeat 3 57 0 1 803 1798 162 10 29 chrUextra 28642489 28642897 -361759 + SAR_DM Satellite Satellite 641 1040 -432 1 803 657 0 0 0 chrUextra 28643016 28643089 -361567 + (GAGAA)n Simple_repeat Simple_repeat 3 75 0 1 803 553 31 0 0 chrUextra 28643859 28643924 -360732 - SSU-rRNA_Dme rRNA rRNA 0 1995 1931 1 803 1554 15 0 0 chrUextra 28644024 28644436 -360220 + (CTATT)n Simple_repeat Simple_repeat 1 412 0 1 803 1244 73 0 7 chrUextra 28644536 28644843 -359813 + (ATAAG)n Simple_repeat Simple_repeat 1 304 0 1 803 440 60 30 0 chrUextra 28644881 28644948 -359708 + (ATAAG)n Simple_repeat Simple_repeat 4 72 0 1 803 1488 22 0 0 chrUextra 28645564 28645744 -358912 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 803 1164 73 0 0 chrUextra 28645758 28645935 -358721 + (GAGAA)n Simple_repeat Simple_repeat 3 179 0 1 803 206 118 0 0 chrUextra 28645935 28645969 -358687 + (AGATG)n Simple_repeat Simple_repeat 4 37 0 1 803 1620 34 0 0 chrUextra 28646082 28646439 -358217 + (ACTTG)n Simple_repeat Simple_repeat 1 357 0 1 803 336 24 0 0 chrUextra 28646442 28646483 -358173 + (ACATG)n Simple_repeat Simple_repeat 5 45 0 1 803 402 39 0 0 chrUextra 28646584 28646636 -358020 + (TTCTC)n Simple_repeat Simple_repeat 3 54 0 1 803 1620 12 0 0 chrUextra 28646656 28646995 -357661 + (GAGAA)n Simple_repeat Simple_repeat 1 339 0 1 803 823 56 10 88 chrUextra 28647113 28647307 -357349 + GA-rich Low_complexity Low_complexity 1 179 0 1 803 1620 0 0 0 chrUextra 28647326 28647506 -357150 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 803 1479 37 0 2 chrUextra 28647611 28648017 -356639 + (CATCT)n Simple_repeat Simple_repeat 1 405 0 1 803 621 0 0 0 chrUextra 28649137 28649206 -355450 + (TTCTC)n Simple_repeat Simple_repeat 3 71 0 1 803 216 0 0 0 chrUextra 28649206 28649230 -355426 + (AGCTG)n Simple_repeat Simple_repeat 1 24 0 1 803 1620 19 0 0 chrUextra 28649230 28649547 -355109 + (GAGAA)n Simple_repeat Simple_repeat 1 317 0 1 803 1907 192 10 7 chrUextra 28649647 28650056 -354600 - SAR_DM Satellite Satellite -711 761 352 1 803 360 10 0 133 chrUextra 28650159 28650279 -354377 + (TTTTTG)n Simple_repeat Simple_repeat 2 105 0 1 803 531 0 0 0 chrUextra 28650667 28650726 -353930 + (GAGAA)n Simple_repeat Simple_repeat 2 60 0 1 803 2052 90 88 27 chrUextra 28651178 28651587 -353069 + DMSAT6 Satellite Satellite 27 460 -10 1 803 1351 72 2 10 chrUextra 28651687 28652096 -352560 + (CTTAT)n Simple_repeat Simple_repeat 1 405 0 1 803 1620 3 0 0 chrUextra 28652196 28652505 -352151 + (TAGA)n Simple_repeat Simple_repeat 1 309 0 1 803 459 113 0 0 chrUextra 28652532 28652603 -352053 + (ATCG)n Simple_repeat Simple_repeat 2 72 0 1 803 1620 0 0 0 chrUextra 28652705 28652929 -351727 + (GAGAA)n Simple_repeat Simple_repeat 1 224 0 1 803 1611 15 0 5 chrUextra 28653222 28653621 -351035 + (TTCTC)n Simple_repeat Simple_repeat 1 397 0 1 803 1599 10 0 2 chrUextra 28653723 28654118 -350538 + (GAGAA)n Simple_repeat Simple_repeat 1 394 0 1 803 3342 17 5 5 chrUextra 28654232 28654640 -350016 - STALKER4_I LTR Gypsy -4951 1579 1172 1 803 1488 22 0 0 chrUextra 28654756 28654936 -349720 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 803 237 33 0 0 chrUextra 28654936 28654966 -349690 + (ATAAG)n Simple_repeat Simple_repeat 2 31 0 1 803 1104 89 0 0 chrUextra 28654966 28655146 -349510 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 803 1557 42 0 0 chrUextra 28655248 28655656 -349000 + (TTCTC)n Simple_repeat Simple_repeat 1 408 0 1 803 3737 2 0 0 chrUextra 28655756 28656164 -348492 - DOC LINE Jockey -1106 3619 3212 1 803 1146 83 0 0 chrUextra 28656275 28656672 -347984 + (TTCTC)n Simple_repeat Simple_repeat 1 397 0 1 803 222 0 11 124 chrUextra 28656775 28656864 -347792 + (CAGAGA)n Simple_repeat Simple_repeat 6 84 0 1 803 524 144 56 4 chrUextra 28656862 28657117 -347539 + GA-rich Low_complexity Low_complexity 1 268 0 1 803 1620 30 2 0 chrUextra 28657280 28657683 -346973 + (CTATT)n Simple_repeat Simple_repeat 1 404 0 1 803 1132 62 12 24 chrUextra 28657822 28657986 -346670 - NTS_DM Other Other -78 162 1 1 803 1624 24 19 14 chrUextra 28657986 28658195 -346461 - NTS_DM Other Other 0 240 31 1 803 3674 7 0 2 chrUextra 28658295 28658702 -345954 - R1_DM LINE R1 -3520 1836 1431 1 803 1611 10 2 0 chrUextra 28658806 28659209 -345447 + (GAGAA)n Simple_repeat Simple_repeat 1 404 0 1 803 277 176 0 19 chrUextra 28659357 28659409 -345247 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 803 266 196 0 19 chrUextra 28659440 28659492 -345164 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 803 266 196 0 19 chrUextra 28659532 28659584 -345072 - LSU-rRNA_Dme rRNA rRNA -1280 2620 2570 1 803 285 0 0 0 chrUextra 28659685 28659716 -344940 - LSU-rRNA_Dme rRNA rRNA 0 3900 3870 1 803 1620 22 0 5 chrUextra 28659816 28660222 -344434 + (TCTA)n Simple_repeat Simple_repeat 1 403 0 1 803 1452 57 0 0 chrUextra 28660322 28660728 -343928 + (CTTAT)n Simple_repeat Simple_repeat 1 406 0 1 803 1211 11 0 55 chrUextra 28662345 28662750 -341906 + (GAGAA)n Simple_repeat Simple_repeat 1 382 0 1 803 1338 45 0 0 chrUextra 28662850 28663028 -341628 + (TCTA)n Simple_repeat Simple_repeat 3 180 0 1 803 645 25 0 0 chrUextra 28663028 28663107 -341549 + (ATCG)n Simple_repeat Simple_repeat 3 81 0 1 803 984 68 0 0 chrUextra 28663109 28663255 -341401 + (TCTA)n Simple_repeat Simple_repeat 4 149 0 1 803 1620 0 0 0 chrUextra 28663860 28664092 -340564 + (C)n Simple_repeat Simple_repeat 1 232 0 1 803 468 67 0 110 chrUextra 28664093 28664211 -340445 + C-rich Low_complexity Low_complexity 1 105 0 1 803 784 116 74 53 chrUextra 28664364 28664760 -339896 + DM176_I LTR Gypsy 295 671 -5749 1 803 395 0 0 162 chrUextra 28664934 28665270 -339386 + (CTATG)n Simple_repeat Simple_repeat 1 281 0 1 803 1536 42 0 2 chrUextra 28665372 28665776 -338880 + (CTTAT)n Simple_repeat Simple_repeat 1 402 0 1 803 552 130 64 12 chrUextra 28665878 28666049 -338607 + CT-rich Low_complexity Low_complexity 1 180 0 1 803 427 161 40 35 chrUextra 28666077 28666251 -338405 + CT-rich Low_complexity Low_complexity 5 179 0 1 803 1095 44 0 0 chrUextra 28666380 28666517 -338139 + (CAATA)n Simple_repeat Simple_repeat 5 141 0 1 803 1506 22 0 0 chrUextra 28666884 28667062 -337594 + (GAGAA)n Simple_repeat Simple_repeat 2 179 0 1 803 897 116 0 0 chrUextra 28667079 28667252 -337404 + (CAGAA)n Simple_repeat Simple_repeat 2 174 0 1 803 297 0 0 0 chrUextra 28667254 28667287 -337369 + (CAGAC)n Simple_repeat Simple_repeat 2 34 0 1 803 462 36 0 0 chrUextra 28667387 28667443 -337213 + (TTCTC)n Simple_repeat Simple_repeat 1 56 0 1 803 579 15 0 0 chrUextra 28668393 28668461 -336195 + (TTCTC)n Simple_repeat Simple_repeat 2 69 0 1 803 1620 6 0 0 chrUextra 28668469 28668794 -335862 + (GAGAA)n Simple_repeat Simple_repeat 1 325 0 1 803 1620 0 0 0 chrUextra 28668896 28669197 -335459 + (TAGA)n Simple_repeat Simple_repeat 1 301 0 1 803 339 25 0 0 chrUextra 28669255 28669295 -335361 + (ATCG)n Simple_repeat Simple_repeat 2 41 0 1 803 1533 15 0 2 chrUextra 28669402 28669802 -334854 + (CATCT)n Simple_repeat Simple_repeat 1 399 0 1 803 1620 0 0 0 chrUextra 28669903 28670083 -334573 + (TCTTG)n Simple_repeat Simple_repeat 1 180 0 1 803 1191 72 0 0 chrUextra 28670409 28670589 -334067 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 803 294 50 0 0 chrUextra 28670589 28670629 -334027 + (CAGAA)n Simple_repeat Simple_repeat 1 40 0 1 803 1347 45 0 0 chrUextra 28670629 28670808 -333848 + (CAGAC)n Simple_repeat Simple_repeat 1 179 0 1 803 264 67 0 132 chrUextra 28670911 28671032 -333624 + A-rich Low_complexity Low_complexity 4 108 0 1 803 370 79 0 141 chrUextra 28671059 28671265 -333391 + A-rich Low_complexity Low_complexity 4 180 0 1 803 1521 14 0 0 chrUextra 28671410 28671629 -333027 + (GAGAA)n Simple_repeat Simple_repeat 1 219 0 1 803 518 160 0 7 chrUextra 28671631 28671782 -332874 + GA-rich Low_complexity Low_complexity 3 152 0 1 803 379 155 18 96 chrUextra 28672414 28672805 -331851 + GA-rich Low_complexity Low_complexity 1 360 0 1 803 1521 17 0 0 chrUextra 28672919 28673099 -331557 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 803 365 119 48 19 chrUextra 28673129 28673232 -331424 + GA-rich Low_complexity Low_complexity 5 110 0 1 803 770 162 57 57 chrUextra 28673422 28673599 -331057 - Gypsy_I LTR Gypsy -5897 610 434 1 803 659 189 6 23 chrUextra 28673597 28673770 -330886 + G_DM LINE Jockey 4092 4261 -85 1 803 1111 88 0 14 chrUextra 28674430 28674713 -329943 + (AATAG)n Simple_repeat Simple_repeat 1 278 0 1 803 873 19 0 0 chrUextra 28674719 28674822 -329834 + (GAGAA)n Simple_repeat Simple_repeat 2 104 0 1 803 1421 73 5 5 chrUextra 28674922 28675321 -329335 + (AATAG)n Simple_repeat Simple_repeat 1 399 0 1 803 1620 11 0 0 chrUextra 28675936 28676295 -328361 + (GAGAA)n Simple_repeat Simple_repeat 1 359 0 1 803 208 132 132 0 chrUextra 28676433 28676516 -328140 + (CTTG)n Simple_repeat Simple_repeat 2 95 0 1 803 563 17 0 137 chrUextra 28676546 28676751 -327905 + A-rich Low_complexity Low_complexity 2 178 0 1 803 227 158 132 0 chrUextra 28676703 28676817 -327839 + (CAAA)n Simple_repeat Simple_repeat 3 131 0 1 803 357 0 0 136 chrUextra 28676922 28677076 -327580 + (CAGAGA)n Simple_repeat Simple_repeat 6 138 0 1 803 546 0 136 0 chrUextra 28677090 28677244 -327412 + (GA)n Simple_repeat Simple_repeat 2 176 0 1 803 3655 0 0 2 chrUextra 28677919 28678318 -326338 + LSU-rRNA_Dme rRNA rRNA 688 1085 -2815 1 803 1276 45 0 11 chrUextra 28678419 28678601 -326055 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 803 191 61 0 29 chrUextra 28678601 28678621 -326035 + (CTTAT)n Simple_repeat Simple_repeat 2 21 0 1 803 1309 39 0 11 chrUextra 28678621 28678803 -325853 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 803 191 61 0 29 chrUextra 28678803 28678816 -325840 + (CTTAT)n Simple_repeat Simple_repeat 2 14 0 1 803 1187 70 6 0 chrUextra 28679919 28680090 -324566 + (TTCTC)n Simple_repeat Simple_repeat 1 172 0 1 803 2425 75 10 20 chrUextra 28680410 28680806 -323850 - DMSAT6 Satellite Satellite -39 431 40 1 803 387 56 0 0 chrUextra 28680908 28680962 -323694 + (TTCTC)n Simple_repeat Simple_repeat 5 58 0 1 803 1121 50 5 38 chrUextra 28680986 28681171 -323485 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 803 609 84 60 22 chrUextra 28681171 28681305 -323351 + GA-rich Low_complexity Low_complexity 3 141 0 1 803 273 79 199 21 chrUextra 28681409 28681801 -322855 + (ATATG)n Simple_repeat Simple_repeat 1 461 0 1 803 1401 36 0 10 chrUextra 28681906 28682299 -322357 + (GAGAA)n Simple_repeat Simple_repeat 1 388 0 1 803 2366 74 39 10 chrUextra 28682399 28682782 -321874 + DMSAT6 Satellite Satellite 49 442 -28 1 803 3123 41 0 2 chrUextra 28682895 28683290 -321366 - IDEFIX_I LTR Gypsy -1285 4343 3950 1 803 3121 39 8 10 chrUextra 28683390 28683783 -320873 + DM297_LTR LTR Gypsy 23 414 0 1 803 609 85 55 21 chrUextra 28683915 28683935 -320721 + polypurine Low_complexity Low_complexity 5 22 0 1 803 1013 96 17 11 chrUextra 28683935 28684114 -320542 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 803 609 85 55 21 chrUextra 28684114 28684238 -320418 + GA-rich Low_complexity Low_complexity 23 153 0 1 803 371 0 0 0 chrUextra 28685369 28685409 -319247 - NTS_DM Other Other -200 40 1 1 803 1986 0 17 13 chrUextra 28685409 28685648 -319008 - NTS_DM Other Other 0 240 1 1 803 772 18 35 26 chrUextra 28685648 28685763 -318893 - NTS_DM Other Other 0 240 125 1 803 2190 93 28 20 chrUextra 28685863 28686257 -318399 - DMSAT6 Satellite Satellite -28 442 46 1 803 1620 10 0 3 chrUextra 28686357 28686751 -317905 + (GAGAA)n Simple_repeat Simple_repeat 1 392 0 1 803 1041 96 0 0 chrUextra 28686866 28687044 -317612 + (CTTAT)n Simple_repeat Simple_repeat 1 178 0 1 803 1027 84 0 11 chrUextra 28687065 28687245 -317411 + (TCTTG)n Simple_repeat Simple_repeat 3 180 0 1 803 1206 67 0 0 chrUextra 28687839 28688017 -316639 + (GAGAA)n Simple_repeat Simple_repeat 2 179 0 1 803 1449 30 0 0 chrUextra 28688033 28688233 -316423 + (GAGAA)n Simple_repeat Simple_repeat 1 200 0 1 803 1620 0 0 0 chrUextra 28688364 28688724 -315932 + (TAGA)n Simple_repeat Simple_repeat 1 360 0 1 803 1224 62 0 0 chrUextra 28688844 28689055 -315601 + (TTCTC)n Simple_repeat Simple_repeat 1 211 0 1 803 871 100 0 13 chrUextra 28689067 28689219 -315437 + (GAGAA)n Simple_repeat Simple_repeat 1 150 0 1 803 1587 32 0 26 chrUextra 28689319 28689619 -315037 + (G)n Simple_repeat Simple_repeat 1 292 0 1 803 261 0 0 0 chrUextra 28689641 28689670 -314986 + (G)n Simple_repeat Simple_repeat 1 29 0 1 803 1143 72 0 0 chrUextra 28690305 28690472 -314184 + (TAGA)n Simple_repeat Simple_repeat 4 170 0 1 803 228 130 0 0 chrUextra 28690473 28690519 -314137 + (CTAG)n Simple_repeat Simple_repeat 1 46 0 1 803 1296 51 0 0 chrUextra 28690520 28690697 -313959 + (TAGA)n Simple_repeat Simple_repeat 3 179 0 1 803 319 331 36 14 chrUextra 28690797 28690935 -313721 + CT-rich Low_complexity Low_complexity 3 143 0 1 803 398 6 0 160 chrUextra 28690948 28691160 -313496 + CT-rich Low_complexity Low_complexity 1 178 0 1 803 273 29 0 0 chrUextra 28691289 28691323 -313333 + (TTCTC)n Simple_repeat Simple_repeat 5 38 0 1 803 578 157 51 9 chrUextra 28691339 28691679 -312977 + GA-rich Low_complexity Low_complexity 1 354 0 1 803 3624 3 0 0 chrUextra 28692273 28692665 -311991 + R1_DM LINE R1 1360 1751 -3605 1 803 2342 88 25 15 chrUextra 28692765 28693157 -311499 - DMSAT6 Satellite Satellite -43 427 32 1 803 1620 52 0 0 chrUextra 28693257 28693649 -311007 + (TAGA)n Simple_repeat Simple_repeat 1 392 0 1 803 702 152 0 0 chrUextra 28693749 28693926 -310730 + (TCTCTG)n Simple_repeat Simple_repeat 4 180 0 1 803 3450 13 8 0 chrUextra 28694241 28694632 -310024 - DOC2_DM LINE Jockey -2700 2093 1700 1 803 522 43 0 0 chrUextra 28695054 28695123 -309533 + (GAGAA)n Simple_repeat Simple_repeat 2 70 0 1 803 1092 89 0 0 chrUextra 28695224 28695404 -309252 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 803 1578 6 0 0 chrUextra 28695434 28695613 -309043 + (TTCTC)n Simple_repeat Simple_repeat 2 180 0 1 803 1620 0 0 0 chrUextra 28695730 28695910 -308746 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 1 803 582 180 0 0 chrUextra 28695925 28696103 -308553 + (TAGA)n Simple_repeat Simple_repeat 3 180 0 1 803 1446 33 0 0 chrUextra 28696215 28696395 -308261 + (CACAA)n Simple_repeat Simple_repeat 1 180 0 1 803 474 231 7 13 chrUextra 28696434 28696583 -308073 + DOC LINE Jockey 10 157 -4568 1 803 1620 94 0 3 chrUextra 28696693 28697045 -307611 + (TAGA)n Simple_repeat Simple_repeat 1 351 0 1 803 1569 18 0 0 chrUextra 28697183 28697573 -307083 + (TAGA)n Simple_repeat Simple_repeat 1 390 0 1 803 3466 10 0 5 chrUextra 28697673 28698063 -306593 + SSU-rRNA_Dme rRNA rRNA 1269 1656 -339 1 803 581 11 0 136 chrUextra 28698165 28698371 -306285 + (TAAAAA)n Simple_repeat Simple_repeat 2 179 0 1 803 401 51 0 138 chrUextra 28698372 28698553 -306103 + A-rich Low_complexity Low_complexity 6 161 0 1 803 1481 32 0 11 chrUextra 28698662 28699042 -305614 + (GAGAA)n Simple_repeat Simple_repeat 1 375 0 1 803 1382 41 0 12 chrUextra 28699631 28699954 -304702 + (TTCTC)n Simple_repeat Simple_repeat 1 318 0 1 803 348 43 0 0 chrUextra 28699974 28700020 -304636 + (GAGAA)n Simple_repeat Simple_repeat 1 46 0 1 803 243 33 98 0 chrUextra 28700445 28700506 -304150 + (GA)n Simple_repeat Simple_repeat 2 68 0 1 803 1580 21 0 5 chrUextra 28700609 28700994 -303662 + (CGAGA)n Simple_repeat Simple_repeat 1 382 0 1 803 2184 77 13 28 chrUextra 28701097 28701485 -303171 - DMSAT6 Satellite Satellite -44 426 45 1 803 1527 29 0 3 chrUextra 28701587 28701973 -302683 + (GAGAA)n Simple_repeat Simple_repeat 1 384 0 1 803 1263 57 0 0 chrUextra 28702082 28702259 -302397 + (TTCTC)n Simple_repeat Simple_repeat 4 180 0 1 803 924 82 0 5 chrUextra 28702259 28702460 -302196 + (CTTAT)n Simple_repeat Simple_repeat 1 199 0 1 803 3347 0 0 5 chrUextra 28702560 28702947 -301709 - LSU-rRNA_Dme rRNA rRNA -3037 863 479 1 803 1449 22 115 6 chrUextra 28703047 28703229 -301427 + DMRT1B LINE R1 4982 5183 0 1 803 1620 0 0 0 chrUextra 28703229 28703431 -301225 + (CACAA)n Simple_repeat Simple_repeat 1 202 0 1 803 1371 6 0 0 chrUextra 28703533 28703689 -300967 + (CAAGA)n Simple_repeat Simple_repeat 1 156 0 1 803 1529 185 3 32 chrUextra 28704022 28704401 -300255 + SAR_DM Satellite Satellite 524 891 -581 1 803 1191 69 0 0 chrUextra 28704505 28704680 -299976 + (AATAG)n Simple_repeat Simple_repeat 5 179 0 1 100 1554 11 0 0 chrUextra 28704694 28704874 -299782 + (AATAG)n Simple_repeat Simple_repeat 1 180 0 1 804 1620 25 0 0 chrUextra 28705496 28705856 -298800 + (GAGAA)n Simple_repeat Simple_repeat 1 360 0 1 804 962 9 0 9 chrUextra 28705963 28706079 -298577 + (CTTAG)n Simple_repeat Simple_repeat 1 115 0 1 804 600 53 0 0 chrUextra 28706079 28706154 -298502 + (TCTTG)n Simple_repeat Simple_repeat 1 76 0 1 804 1092 89 0 0 chrUextra 28706154 28706334 -298322 + (ATCTG)n Simple_repeat Simple_repeat 1 180 0 1 804 480 18 0 0 chrUextra 28706448 28706505 -298151 + (TTCTC)n Simple_repeat Simple_repeat 5 61 0 1 804 468 0 0 0 chrUextra 28707683 28707735 -296921 + (T)n Simple_repeat Simple_repeat 1 52 0 1 804 595 0 0 0 chrUextra 28707903 28707966 -296690 - NTS_DM Other Other -177 63 1 1 804 1926 0 17 21 chrUextra 28707966 28708207 -296449 - NTS_DM Other Other 0 240 1 1 804 570 0 49 37 chrUextra 28708207 28708288 -296368 - NTS_DM Other Other 0 240 159 1 804 1599 5 0 3 chrUextra 28708388 28708773 -295883 + (GAGAA)n Simple_repeat Simple_repeat 1 383 0 1 804 1138 12 0 58 chrUextra 28708873 28709237 -295419 + (GAGAA)n Simple_repeat Simple_repeat 1 342 0 1 804 204 217 0 21 chrUextra 28709371 28709418 -295238 + (CGAG)n Simple_repeat Simple_repeat 1 46 0 1 804 279 125 236 0 chrUextra 28709566 28709742 -294914 + (TTTAG)n Simple_repeat Simple_repeat 1 217 0 1 804 1494 17 0 0 chrUextra 28709863 28710040 -294616 + (TTCTC)n Simple_repeat Simple_repeat 1 177 0 1 804 1206 67 0 0 chrUextra 28710041 28710219 -294437 + (TCTCG)n Simple_repeat Simple_repeat 3 180 0 1 804 1547 50 0 3 chrUextra 28710330 28710701 -293955 + (ATAAG)n Simple_repeat Simple_repeat 1 369 0 1 804 21 36 0 0 chrUextra 28711152 28711180 -293476 + AT_rich Low_complexity Low_complexity 1 28 0 1 804 1812 157 18 21 chrUextra 28711294 28711678 -292978 - SAR_DM Satellite Satellite -625 847 465 1 804 267 20 17 145 chrUextra 28711798 28712157 -292499 + (CACAA)n Simple_repeat Simple_repeat 1 312 0 1 804 202 265 0 0 chrUextra 28712268 28712317 -292339 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 804 1272 7 0 0 chrUextra 28712747 28712892 -291764 + (CTTAT)n Simple_repeat Simple_repeat 5 149 0 1 804 1058 85 0 6 chrUextra 28712903 28713081 -291575 + (TTCTC)n Simple_repeat Simple_repeat 1 177 0 1 804 333 0 0 0 chrUextra 28713081 28713117 -291539 + (CTACT)n Simple_repeat Simple_repeat 1 37 0 1 804 1467 42 0 0 chrUextra 28713248 28713608 -291048 + (AATAG)n Simple_repeat Simple_repeat 1 360 0 1 804 1599 22 0 0 chrUextra 28714207 28714567 -290089 + (ATAAG)n Simple_repeat Simple_repeat 1 360 0 1 804 905 138 38 6 chrUextra 28714689 28715036 -289620 + CT-rich Low_complexity Low_complexity 1 358 0 1 804 2666 8 3 6 chrUextra 28715166 28715519 -289137 + TABOR_I LTR Gypsy 5815 6166 -170 1 804 1521 62 0 0 chrUextra 28715653 28716010 -288646 + (TAGA)n Simple_repeat Simple_repeat 1 357 0 1 804 198 0 0 0 chrUextra 28716010 28716032 -288624 + (CGAT)n Simple_repeat Simple_repeat 1 22 0 1 804 2319 78 60 0 chrUextra 28716132 28716515 -288141 + STALKER4_I LTR Gypsy 5925 6330 -200 1 804 23 0 0 0 chrUextra 28717659 28717682 -286974 + AT_rich Low_complexity Low_complexity 1 23 0 1 804 282 56 0 0 chrUextra 28717925 28717961 -286695 + (TTCTC)n Simple_repeat Simple_repeat 5 40 0 1 804 189 13 0 133 chrUextra 28718136 28718226 -286430 + (TC)n Simple_repeat Simple_repeat 1 78 0 1 804 373 31 108 30 chrUextra 28718227 28718394 -286262 + CT-rich Low_complexity Low_complexity 1 180 0 1 804 203 108 54 0 chrUextra 28718404 28718441 -286215 + GA-rich Low_complexity Low_complexity 1 39 0 1 804 1356 39 0 24 chrUextra 28718542 28718917 -285739 + (GGAGAA)n Simple_repeat Simple_repeat 1 365 0 1 804 1620 0 0 0 chrUextra 28719502 28719717 -284939 + (TAGA)n Simple_repeat Simple_repeat 1 215 0 1 804 191 139 23 0 chrUextra 28719717 28719743 -284913 + (CAGA)n Simple_repeat Simple_repeat 1 26 0 1 804 537 100 0 0 chrUextra 28719743 28719833 -284823 + (ATCG)n Simple_repeat Simple_repeat 4 93 0 1 804 191 139 23 0 chrUextra 28719833 28719849 -284807 + (CAGA)n Simple_repeat Simple_repeat 3 18 0 1 804 248 0 0 30 chrUextra 28719849 28719882 -284774 + (TAGA)n Simple_repeat Simple_repeat 1 32 0 1 804 1599 4 0 0 chrUextra 28720086 28720360 -284296 + (GAGAA)n Simple_repeat Simple_repeat 1 274 0 1 804 1620 8 0 0 chrUextra 28720481 28720841 -283815 + (GAGAA)n Simple_repeat Simple_repeat 1 360 0 1 804 1479 22 0 0 chrUextra 28720942 28721121 -283535 + (GAGAA)n Simple_repeat Simple_repeat 2 180 0 1 804 1290 56 0 0 chrUextra 28721136 28721316 -283340 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 804 1831 176 11 5 chrUextra 28721422 28721798 -282858 - SAR_DM Satellite Satellite -599 873 496 1 804 1580 0 0 6 chrUextra 28721902 28722083 -282573 + (TTGTG)n Simple_repeat Simple_repeat 1 180 0 1 804 266 121 61 0 chrUextra 28722381 28722447 -282209 + CT-rich Low_complexity Low_complexity 5 74 0 1 804 730 141 35 15 chrUextra 28722499 28722756 -281900 + GA-rich Low_complexity Low_complexity 1 261 0 1 804 1620 3 0 0 chrUextra 28722860 28723234 -281422 + (TAGA)n Simple_repeat Simple_repeat 1 374 0 1 804 396 231 8 0 chrUextra 28723340 28723474 -281182 + (CAAA)n Simple_repeat Simple_repeat 4 138 0 1 804 212 6 10 149 chrUextra 28723484 28723678 -280978 + (CACAA)n Simple_repeat Simple_repeat 4 170 0 1 804 1620 56 0 0 chrUextra 28724297 28724676 -279980 + (TAGA)n Simple_repeat Simple_repeat 1 379 0 1 804 233 0 0 161 chrUextra 28724779 28724990 -279666 + (CACAA)n Simple_repeat Simple_repeat 4 180 0 1 804 654 160 0 0 chrUextra 28725003 28725134 -279522 + (CA)n Simple_repeat Simple_repeat 1 131 0 1 804 1611 0 0 0 chrUextra 28725258 28725518 -279138 + (CAATA)n Simple_repeat Simple_repeat 1 260 0 1 804 873 0 0 0 chrUextra 28725527 28725624 -279032 + (TATAA)n Simple_repeat Simple_repeat 2 98 0 1 804 448 155 49 7 chrUextra 28725766 28725909 -278747 + GA-rich Low_complexity Low_complexity 5 153 0 1 804 340 148 66 0 chrUextra 28725949 28726071 -278585 + GA-rich Low_complexity Low_complexity 5 134 0 1 804 293 0 130 0 chrUextra 28726689 28726766 -277890 + (GA)n Simple_repeat Simple_repeat 2 88 0 1 804 206 0 0 129 chrUextra 28726767 28726829 -277827 + (CAGAGA)n Simple_repeat Simple_repeat 1 54 0 1 804 460 0 0 139 chrUextra 28726854 28727063 -277593 + (CAGAGA)n Simple_repeat Simple_repeat 1 180 0 1 804 1620 13 0 0 chrUextra 28727165 28727542 -277114 + (GAGAA)n Simple_repeat Simple_repeat 1 377 0 1 804 1326 75 0 3 chrUextra 28728128 28728495 -276161 + (GAGAA)n Simple_repeat Simple_repeat 1 365 0 1 804 524 28 0 137 chrUextra 28729075 28729280 -275376 + A-rich Low_complexity Low_complexity 2 178 0 1 804 357 45 0 137 chrUextra 28729296 28729449 -275207 + A-rich Low_complexity Low_complexity 5 136 0 1 804 1026 0 0 0 chrUextra 28729812 28729926 -274730 + (TTCTC)n Simple_repeat Simple_repeat 4 117 0 1 804 516 32 0 0 chrUextra 28730026 28730088 -274568 + (TTTTG)n Simple_repeat Simple_repeat 4 65 0 1 804 1620 10 0 0 chrUextra 28730088 28730387 -274269 + (CAAAA)n Simple_repeat Simple_repeat 1 299 0 1 804 1838 90 43 21 chrUextra 28730502 28730876 -273780 - DMSAT6 Satellite Satellite -5 465 84 1 804 1620 11 0 0 chrUextra 28730978 28731328 -273328 + (GAGAA)n Simple_repeat Simple_repeat 1 350 0 1 804 1566 50 0 3 chrUextra 28731454 28731820 -272836 + (CTTAT)n Simple_repeat Simple_repeat 1 364 0 1 804 558 100 67 0 chrUextra 28731997 28732117 -272539 + CT-rich Low_complexity Low_complexity 2 129 0 1 804 1151 72 0 6 chrUextra 28732117 28732298 -272358 + (CTTAT)n Simple_repeat Simple_repeat 1 180 0 1 804 540 42 0 0 chrUextra 28732398 28732469 -272187 + (TCTCG)n Simple_repeat Simple_repeat 1 71 0 1 804 1281 56 0 0 chrUextra 28732469 28732648 -272008 + (TTCTC)n Simple_repeat Simple_repeat 1 179 0 1 804 735 90 0 0 chrUextra 28732649 28732771 -271885 + (CTTAT)n Simple_repeat Simple_repeat 3 124 0 1 804 774 0 0 0 chrUextra 28732871 28732959 -271697 + LSU-rRNA_Dme rRNA rRNA 2567 2654 -1246 1 804 2427 10 0 3 chrUextra 28732955 28733244 -271412 + R1_DM LINE R1 4831 5118 -238 1 804 1137 125 0 25 chrUextra 28733347 28733702 -270954 + (TA)n Simple_repeat Simple_repeat 1 345 0 1 804 252 0 0 0 chrUextra 28734290 28734318 -270338 + (TTCTC)n Simple_repeat Simple_repeat 5 32 0 1 804 842 28 0 9 chrUextra 28734762 28734872 -269784 + (TTCTC)n Simple_repeat Simple_repeat 1 109 0 1 804 1158 82 0 0 chrUextra 28734887 28735134 -269522 + (GAGAA)n Simple_repeat Simple_repeat 1 247 0 1 804 219 158 52 17 chrUextra 28735328 28735386 -269270 + (CATA)n Simple_repeat Simple_repeat 1 60 0 1 804 318 26 0 0 chrUextra 28735464 28735503 -269153 + (A)n Simple_repeat Simple_repeat 1 39 0 1 804 1359 45 0 0 chrUextra 28735706 28735885 -268771 + (TTGTG)n Simple_repeat Simple_repeat 1 179 0 1 804 216 158 0 0 chrUextra 28735885 28735942 -268714 + (GTGTG)n Simple_repeat Simple_repeat 4 60 0 1 804 570 51 0 0 chrUextra 28735955 28736033 -268623 + (TTGTG)n Simple_repeat Simple_repeat 4 81 0 1 804 375 23 0 0 chrUextra 28736033 28736077 -268579 + (CAACT)n Simple_repeat Simple_repeat 2 45 0 1 804 1620 10 0 0 chrUextra 28736177 28736476 -268180 + (GAGAA)n Simple_repeat Simple_repeat 1 299 0 1 804 1488 55 0 3 chrUextra 28736648 28737019 -267637 + (GAAAA)n Simple_repeat Simple_repeat 1 369 0 1 804 1437 16 0 12 chrUextra 28737160 28737409 -267247 + (TTCTC)n Simple_repeat Simple_repeat 1 245 0 1 804 210 37 0 0 chrUextra 28737409 28737435 -267221 + (CATCT)n Simple_repeat Simple_repeat 1 27 0 1 804 324 0 0 0 chrUextra 28737454 28737490 -267166 + (GAGAA)n Simple_repeat Simple_repeat 4 39 0 1 804 1092 158 0 3 chrUextra 28737590 28737953 -266703 + (TA)n Simple_repeat Simple_repeat 1 361 0 1 804 1533 22 0 8 chrUextra 28738061 28738426 -266230 + (TCTA)n Simple_repeat Simple_repeat 1 361 0 1 804 485 237 12 0 chrUextra 28738533 28738702 -265954 + (CAAA)n Simple_repeat Simple_repeat 4 174 0 1 804 452 23 10 121 chrUextra 28738704 28738903 -265753 + (CACAA)n Simple_repeat Simple_repeat 4 180 0 1 804 690 119 0 0 chrUextra 28739003 28739137 -265519 + (CAAGA)n Simple_repeat Simple_repeat 1 134 0 1 804 1356 52 0 0 chrUextra 28739137 28739370 -265286 + (ACATG)n Simple_repeat Simple_repeat 1 233 0 1 804 1044 0 0 0 chrUextra 28739473 28739589 -265067 + (TTCTC)n Simple_repeat Simple_repeat 1 116 0 1 804 1364 36 0 4 chrUextra 28739589 28739843 -264813 + (CTTAT)n Simple_repeat Simple_repeat 1 252 0 1 804 1487 17 0 6 chrUextra 28739943 28740122 -264534 + (TTCTC)n Simple_repeat Simple_repeat 1 178 0 1 804 291 85 0 0 chrUextra 28740122 28740168 -264488 + (CATCT)n Simple_repeat Simple_repeat 1 47 0 1 804 795 96 0 0 chrUextra 28740177 28740313 -264343 + (GAGAA)n Simple_repeat Simple_repeat 5 140 0 1 804 1406 75 0 8 chrUextra 28740414 28740775 -263881 + (GAGAA)n Simple_repeat Simple_repeat 1 358 0 1 804 1620 0 0 0 chrUextra 28740883 28741219 -263437 + (GAGAA)n Simple_repeat Simple_repeat 1 336 0 1 804 194 0 13 120 chrUextra 28741826 28741901 -262755 + (CAGAGA)n Simple_repeat Simple_repeat 6 72 0 1 804 546 12 117 12 chrUextra 28741896 28742058 -262598 + (GA)n Simple_repeat Simple_repeat 2 180 0 1 804 279 35 83 58 chrUextra 28742058 28742178 -262478 + GA-rich Low_complexity Low_complexity 2 124 0 1 804 343 0 0 41 chrUextra 28743251 28743300 -261356 + (TTGTG)n Simple_repeat Simple_repeat 4 50 0 1 804 245 241 0 0 chrUextra 28743308 28743387 -261269 + (TTTG)n Simple_repeat Simple_repeat 4 82 0 1 804 219 0 0 162 chrUextra 28743395 28743599 -261057 + (TTGTG)n Simple_repeat Simple_repeat 5 175 0 1 804 1041 95 0 0 chrUextra 28743717 28744065 -260591 + (ACATG)n Simple_repeat Simple_repeat 1 348 0 1 804 1470 44 0 0 chrUextra 28744170 28744537 -260119 + (ATAAG)n Simple_repeat Simple_repeat 1 367 0 1 804 498 17 0 0 chrUextra 28744637 28744696 -259960 + (TTCTC)n Simple_repeat Simple_repeat 3 61 0 1 804 1479 54 0 0 chrUextra 28744721 28745001 -259655 + (GAGAA)n Simple_repeat Simple_repeat 1 280 0 1 804 1435 32 0 0 chrUextra 28745106 28745292 -259364 - NTS_DM Other Other -54 186 1 1 804 1250 11 22 22 chrUextra 28745292 28745475 -259181 - NTS_DM Other Other 0 240 58 1 804 1080 42 0 0 chrUextra 28745575 28745717 -258939 + (ATAAG)n Simple_repeat Simple_repeat 4 145 0 1 804 1401 43 0 0 chrUextra 28745731 28745942 -258714 + (ATAAG)n Simple_repeat Simple_repeat 1 211 0 1 804 1557 39 0 8 chrUextra 28746044 28746405 -258251 + (GAGAA)n Simple_repeat Simple_repeat 1 358 0 1 804 858 8 71 19 chrUextra 28746513 28746781 -257875 + (TAG)n Simple_repeat Simple_repeat 1 282 0 1 804 182 28 108 27 chrUextra 28746802 28746876 -257780 + (TA)n Simple_repeat Simple_repeat 1 80 0 1 804 1579 165 15 6 chrUextra 28747008 28747349 -257307 - SAR_DM Satellite Satellite -749 723 380 1 804 2717 47 0 11 chrUextra 28747449 28747817 -256839 - HETA LINE telomeric -120 5961 5598 1 804 1620 6 0 3 chrUextra 28747918 28748279 -256377 + (TTCTCC)n Simple_repeat Simple_repeat 1 359 0 1 804 1399 22 0 11 chrUextra 28748393 28748574 -256082 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 804 1062 87 0 0 chrUextra 28748574 28748747 -255909 + (CGAGA)n Simple_repeat Simple_repeat 1 173 0 1 804 1620 0 0 0 chrUextra 28748851 28749071 -255585 + (TAGA)n Simple_repeat Simple_repeat 1 220 0 1 804 564 176 0 0 chrUextra 28749087 28749218 -255438 + (TAGA)n Simple_repeat Simple_repeat 1 131 0 1 804 1587 14 0 3 chrUextra 28749318 28749683 -254973 + (GAGAA)n Simple_repeat Simple_repeat 1 363 0 1 804 1191 69 0 11 chrUextra 28749785 28750152 -254504 + (CTTAT)n Simple_repeat Simple_repeat 1 362 0 1 804 1234 33 12 16 chrUextra 28750361 28750608 -254048 + (TCTTG)n Simple_repeat Simple_repeat 1 246 0 1 804 1389 39 0 0 chrUextra 28750719 28750899 -253757 + (AGATG)n Simple_repeat Simple_repeat 1 180 0 1 804 888 106 0 0 chrUextra 28750899 28751060 -253596 + (ACATG)n Simple_repeat Simple_repeat 5 165 0 1 804 606 49 0 0 chrUextra 28751185 28751267 -253389 + (CGAGA)n Simple_repeat Simple_repeat 3 84 0 1 804 1620 7 0 0 chrUextra 28751267 28751551 -253105 + (CCGAG)n Simple_repeat Simple_repeat 1 284 0 1 804 1455 36 0 0 chrUextra 28751651 28751985 -252671 + (CTTAT)n Simple_repeat Simple_repeat 1 334 0 1 804 1620 17 0 0 chrUextra 28752117 28752475 -252181 + (GAGAA)n Simple_repeat Simple_repeat 1 358 0 1 804 1500 23 0 0 chrUextra 28752583 28752759 -251897 + (TTCTC)n Simple_repeat Simple_repeat 2 177 0 1 804 1479 22 0 0 chrUextra 28752770 28752949 -251707 + (TTCTC)n Simple_repeat Simple_repeat 2 180 0 1 804 1599 3 0 3 chrUextra 28753049 28753415 -251241 + (GAGAA)n Simple_repeat Simple_repeat 1 364 0 1 804 216 0 0 0 chrUextra 28753515 28753539 -251117 + (TTCTC)n Simple_repeat Simple_repeat 4 27 0 1 804 1620 12 0 0 chrUextra 28753543 28753873 -250783 + (GAGAA)n Simple_repeat Simple_repeat 1 330 0 1 804 1620 6 0 0 chrUextra 28753991 28754345 -250311 + (TTCTC)n Simple_repeat Simple_repeat 1 354 0 1 804 934 0 29 22 chrUextra 28754445 28754582 -250074 + NTS_DM Other Other 103 240 0 1 804 1716 27 0 4 chrUextra 28754582 28754807 -249849 + NTS_DM Other Other 1 224 -16 1 804 1620 0 0 0 chrUextra 28754910 28755119 -249537 + (GAGAA)n Simple_repeat Simple_repeat 1 209 0 1 804 1620 0 0 0 chrUextra 28755375 28755706 -248950 + (GAGAA)n Simple_repeat Simple_repeat 1 331 0 1 804 507 56 0 0 chrUextra 28756305 28756376 -248280 + (TTCTC)n Simple_repeat Simple_repeat 5 75 0 1 804 1269 65 0 11 chrUextra 28756385 28756662 -247994 + (GAGAA)n Simple_repeat Simple_repeat 1 274 0 1 804 1620 36 0 0 chrUextra 28756775 28757133 -247523 + (TTCTC)n Simple_repeat Simple_repeat 1 358 0 1 804 1408 34 0 8 chrUextra 28757233 28757597 -247059 + (CTTAT)n Simple_repeat Simple_repeat 1 360 0 1 804 357 86 0 0 chrUextra 28757698 28757756 -246900 + (TATTG)n Simple_repeat Simple_repeat 1 58 0 1 804 1620 4 0 0 chrUextra 28757756 28758030 -246626 + (TCTTG)n Simple_repeat Simple_repeat 1 274 0 1 804 392 161 81 39 chrUextra 28758161 28758467 -246189 + (CATATA)n Simple_repeat Simple_repeat 1 318 0 1 804 1580 29 0 3 chrUextra 28758644 28758986 -245670 + (ATAAG)n Simple_repeat Simple_repeat 1 341 0 1 804 1620 0 0 0 chrUextra 28759550 28759864 -244792 + (GAGAA)n Simple_repeat Simple_repeat 1 314 0 1 804 1446 181 11 22 chrUextra 28760013 28760375 -244281 + SAR_DM Satellite Satellite 415 772 -700 1 804 1620 6 0 0 chrUextra 28760939 28761285 -243371 + (CAAGA)n Simple_repeat Simple_repeat 1 346 0 1 804 336 24 0 0 chrUextra 28761402 28761443 -243213 + (TTCTC)n Simple_repeat Simple_repeat 2 42 0 1 804 1587 47 0 0 chrUextra 28761457 28761737 -242919 + (GAGAA)n Simple_repeat Simple_repeat 1 280 0 1 804 372 129 59 17 chrUextra 28761864 28761982 -242674 + CT-rich Low_complexity Low_complexity 2 124 0 1 804 821 107 17 34 chrUextra 28762012 28762187 -242469 + GA-rich Low_complexity Low_complexity 5 176 0 1 804 206 62 31 0 chrUextra 28762194 28762226 -242430 + (GAGAA)n Simple_repeat Simple_repeat 5 37 0 1 804 911 142 0 5 chrUextra 28762790 28763014 -241642 + (CATCT)n Simple_repeat Simple_repeat 1 222 0 1 804 687 178 0 0 chrUextra 28762976 28763150 -241506 + CT-rich Low_complexity Low_complexity 1 174 0 1 804 738 0 0 0 chrUextra 28763712 28763794 -240862 + (CAAGA)n Simple_repeat Simple_repeat 5 86 0 1 804 1620 0 0 3 chrUextra 28764174 28764535 -240121 + (TTCTC)n Simple_repeat Simple_repeat 1 359 0 1 804 1479 167 31 20 chrUextra 28764642 28764996 -239660 + SAR_DM Satellite Satellite 680 1037 -435 1 804 1439 6 0 22 chrUextra 28765112 28765296 -239360 + (CATGT)n Simple_repeat Simple_repeat 1 180 0 1 804 1014 85 0 0 chrUextra 28765296 28765460 -239196 + (CATCT)n Simple_repeat Simple_repeat 1 164 0 1 804 1488 44 0 0 chrUextra 28765560 28765921 -238735 + (TAGA)n Simple_repeat Simple_repeat 1 361 0 1 804 1488 22 0 0 chrUextra 28766021 28766382 -238274 + (ATAAG)n Simple_repeat Simple_repeat 1 361 0 1 804 1620 37 12 0 chrUextra 28766945 28767272 -237384 + (GAGAA)n Simple_repeat Simple_repeat 1 330 0 1 804 2805 39 0 3 chrUextra 28767404 28767765 -236891 - ROO_I LTR Pao -2507 5749 5390 1 804 1413 44 0 0 chrUextra 28768326 28768577 -236079 + (CACAA)n Simple_repeat Simple_repeat 1 251 0 1 804 861 10 0 0 chrUextra 28768588 28768686 -235970 + (CACAA)n Simple_repeat Simple_repeat 1 98 0 1 804 543 16 0 0 chrUextra 28768786 28768850 -235806 + (TTCTC)n Simple_repeat Simple_repeat 5 68 0 1 804 1620 0 0 0 chrUextra 28768863 28769143 -235513 + (GAGAA)n Simple_repeat Simple_repeat 1 280 0 1 804 1226 203 19 28 chrUextra 28769246 28769606 -235050 + SAR_DM Satellite Satellite 443 799 -673 1 804 1620 3 0 0 chrUextra 28769706 28770050 -234606 + (GAGAA)n Simple_repeat Simple_repeat 1 344 0 1 804 459 0 0 0 chrUextra 28770166 28770217 -234439 + (TTCTC)n Simple_repeat Simple_repeat 1 51 0 1 804 1620 7 0 0 chrUextra 28770230 28770525 -234131 + (GAGAA)n Simple_repeat Simple_repeat 1 295 0 1 804 1620 18 0 0 chrUextra 28770627 28770856 -233800 + (TTCTC)n Simple_repeat Simple_repeat 1 229 0 1 804 420 77 0 0 chrUextra 28770857 28770922 -233734 + (TCTCG)n Simple_repeat Simple_repeat 1 65 0 1 804 549 0 0 0 chrUextra 28770925 28770986 -233670 + (GAGAA)n Simple_repeat Simple_repeat 5 65 0 1 804 1464 22 0 3 chrUextra 28771087 28771445 -233211 + (GAGAA)n Simple_repeat Simple_repeat 1 356 0 1 804 927 0 0 0 chrUextra 28772463 28772566 -232090 + (GAGAA)n Simple_repeat Simple_repeat 4 106 0 1 804 1599 59 0 0 chrUextra 28772922 28773281 -231375 + (TAGA)n Simple_repeat Simple_repeat 1 359 0 1 804 594 170 0 0 chrUextra 28773840 28773987 -230669 + (ATCG)n Simple_repeat Simple_repeat 4 150 0 1 804 1488 19 0 0 chrUextra 28773987 28774199 -230457 + (TCTA)n Simple_repeat Simple_repeat 1 212 0 1 804 579 20 49 20 chrUextra 28774300 28774402 -230254 + (TAA)n Simple_repeat Simple_repeat 3 107 0 1 804 1637 34 0 0 chrUextra 28774420 28774657 -229999 - HMSBEAGLE_I LTR Gypsy -5742 787 551 1 804 1307 23 0 32 chrUextra 28774760 28775115 -229541 + (CATCT)n Simple_repeat Simple_repeat 1 343 0 1 804 1921 74 45 17 chrUextra 28775216 28775573 -229083 + DMSAT6 Satellite Satellite 61 427 -43 1 804 390 21 0 0 chrUextra 28775673 28775720 -228936 + (TTCTC)n Simple_repeat Simple_repeat 2 48 0 1 804 1620 23 3 0 chrUextra 28775727 28776028 -228628 + (GAGAA)n Simple_repeat Simple_repeat 1 301 0 1 804 1308 81 0 0 chrUextra 28776135 28776345 -228311 + (TTCTC)n Simple_repeat Simple_repeat 1 210 0 1 804 831 93 0 0 chrUextra 28776348 28776488 -228168 + (CTTAT)n Simple_repeat Simple_repeat 1 140 0 1 804 489 119 207 18 chrUextra 28776590 28776621 -228035 + DNAREP1_DM LINE Penelope 450 480 -114 1 804 189 0 0 0 chrUextra 28776621 28776642 -228014 + (TATATG)n Simple_repeat Simple_repeat 2 22 0 1 804 489 119 207 18 chrUextra 28776642 28776721 -227935 + DNAREP1_DM LINE Penelope 481 579 -15 1 804 398 227 0 0 chrUextra 28776718 28776806 -227850 - MAX_I LTR Pao -5078 2836 2749 1 804 312 204 301 0 chrUextra 28776833 28776936 -227720 - MAX_I LTR Pao -5255 2659 2526 1 804 2737 31 3 8 chrUextra 28777045 28777402 -227254 - LSU-rRNA_Dme rRNA rRNA -2309 1591 1237 1 804 2794 39 0 0 chrUextra 28777502 28777859 -226797 + PROTOP_A DNA P 493 849 -256 1 804 1433 96 0 3 chrUextra 28777959 28778313 -226343 + (TCTTG)n Simple_repeat Simple_repeat 1 353 0 1 804 1142 73 0 6 chrUextra 28778418 28778598 -226058 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 804 984 95 0 0 chrUextra 28778600 28778768 -225888 + (AGATG)n Simple_repeat Simple_repeat 3 170 0 1 804 1587 5 0 0 chrUextra 28779328 28779548 -225108 + (CATCT)n Simple_repeat Simple_repeat 1 220 0 1 804 1092 8 0 0 chrUextra 28779559 28779684 -224972 + (CATCT)n Simple_repeat Simple_repeat 1 125 0 1 804 714 12 0 0 chrUextra 28779784 28779867 -224789 + (TTCTC)n Simple_repeat Simple_repeat 3 85 0 1 804 1479 23 0 11 chrUextra 28779877 28780140 -224516 + (GAGAA)n Simple_repeat Simple_repeat 1 259 0 1 804 1429 0 0 0 chrUextra 28780240 28780392 -224264 - LSU-rRNA_Dme rRNA rRNA -1962 1938 1787 1 804 1351 12 12 6 chrUextra 28780432 28780595 -224061 - LSU-rRNA_Dme rRNA rRNA -2109 1791 1628 1 804 1477 18 0 11 chrUextra 28780696 28780976 -223680 + (TTCTC)n Simple_repeat Simple_repeat 1 277 0 1 804 183 114 0 0 chrUextra 28780979 28781014 -223642 + (TATCG)n Simple_repeat Simple_repeat 4 38 0 1 804 333 0 0 0 chrUextra 28781014 28781050 -223606 + (GAGAA)n Simple_repeat Simple_repeat 5 41 0 1 804 1620 3 0 0 chrUextra 28781152 28781505 -223151 + (GAGAA)n Simple_repeat Simple_repeat 1 353 0 1 804 383 23 0 0 chrUextra 28781605 28781648 -223008 - NTS_DM Other Other -197 43 1 1 804 1714 17 20 45 chrUextra 28781648 28781894 -222762 - NTS_DM Other Other 0 240 1 1 804 451 0 62 46 chrUextra 28781894 28781959 -222697 - NTS_DM Other Other 0 240 175 1 804 3306 3 0 0 chrUextra 28782059 28782413 -222243 + LSU-rRNA_Dme rRNA rRNA 3066 3419 -481 1 804 948 103 0 0 chrUextra 28782526 28782682 -221974 + (CTTAT)n Simple_repeat Simple_repeat 5 160 0 1 804 1161 73 11 11 chrUextra 28782685 28782864 -221792 + (CATCT)n Simple_repeat Simple_repeat 2 180 0 1 804 1578 46 0 8 chrUextra 28782967 28783321 -221335 + (GAGAA)n Simple_repeat Simple_repeat 1 351 0 1 804 1422 33 0 0 chrUextra 28783889 28784069 -220587 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 804 806 87 0 7 chrUextra 28784090 28784229 -220427 + (GAGAA)n Simple_repeat Simple_repeat 1 138 0 1 804 3128 8 0 3 chrUextra 28785236 28785589 -219067 + R1_DM LINE R1 4651 5002 -354 1 804 3244 3 3 0 chrUextra 28786142 28786495 -218161 + LSU-rRNA_Dme rRNA rRNA 2016 2369 -1531 1 804 1552 194 34 6 chrUextra 28786595 28786948 -217708 - SAR_DM Satellite Satellite -525 947 585 1 804 1620 4 0 0 chrUextra 28787048 28787319 -217337 + (CAAGA)n Simple_repeat Simple_repeat 1 271 0 1 804 2222 8 0 0 chrUextra 28787611 28787852 -216804 + SSU-rRNA_Dme rRNA rRNA 1 241 -1754 1 804 1310 54 27 9 chrUextra 28787952 28788289 -216367 + (GAGAA)n Simple_repeat Simple_repeat 1 343 0 1 804 489 17 0 0 chrUextra 28788404 28788462 -216194 + (TTCTC)n Simple_repeat Simple_repeat 5 62 0 1 804 532 30 88 29 chrUextra 28788502 28788672 -215984 + (GA)n Simple_repeat Simple_repeat 1 180 0 1 804 191 51 85 37 chrUextra 28788674 28788756 -215900 + GA-rich Low_complexity Low_complexity 2 87 0 1 804 505 0 130 7 chrUextra 28788866 28789012 -215644 + (TC)n Simple_repeat Simple_repeat 1 164 0 1 804 546 12 124 6 chrUextra 28789043 28789204 -215452 + (GA)n Simple_repeat Simple_repeat 1 180 0 1 804 23 54 0 0 chrUextra 28789417 28789454 -215202 + AT_rich Low_complexity Low_complexity 1 37 0 1 804 975 69 0 0 chrUextra 28789759 28789904 -214752 + (ATAAG)n Simple_repeat Simple_repeat 1 145 0 1 804 828 133 0 0 chrUextra 28789918 28790098 -214558 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 804 1620 20 0 3 chrUextra 28790212 28790561 -214095 + (TCTA)n Simple_repeat Simple_repeat 1 347 0 1 804 2994 26 0 3 chrUextra 28790662 28791012 -213644 + R1_DM LINE R1 3458 3806 -1550 1 804 1620 0 0 0 chrUextra 28791113 28791363 -213293 + (TAGA)n Simple_repeat Simple_repeat 1 250 0 1 804 543 121 0 0 chrUextra 28791363 28791461 -213195 + (ATCG)n Simple_repeat Simple_repeat 2 100 0 1 804 1620 26 0 0 chrUextra 28792014 28792363 -212293 + (GAGAA)n Simple_repeat Simple_repeat 1 349 0 1 804 2031 73 34 17 chrUextra 28792464 28792814 -211842 + DMSAT6 Satellite Satellite 80 435 -35 1 804 2971 20 3 9 chrUextra 28792914 28793264 -211392 - LSU-rRNA_Dme rRNA rRNA -2429 1471 1124 1 804 34 24 0 0 chrUextra 28793531 28793572 -211084 + AT_rich Low_complexity Low_complexity 1 41 0 1 804 2962 29 0 6 chrUextra 28793814 28794164 -210492 + SSU-rRNA_Dme rRNA rRNA 1298 1645 -350 1 804 3090 3 3 9 chrUextra 28794716 28795064 -209592 + SSU-rRNA_Dme rRNA rRNA 1084 1429 -566 1 804 1527 20 0 0 chrUextra 28795613 28795962 -208694 + (GAGAA)n Simple_repeat Simple_repeat 1 349 0 1 804 701 12 0 11 chrUextra 28796511 28796598 -208058 + (TTCTC)n Simple_repeat Simple_repeat 1 86 0 1 804 864 128 0 0 chrUextra 28796622 28796801 -207855 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 804 1424 79 0 3 chrUextra 28796960 28797308 -207348 + (TAGA)n Simple_repeat Simple_repeat 1 346 0 1 804 1620 20 0 3 chrUextra 28797408 28797756 -206900 + (TTCTC)n Simple_repeat Simple_repeat 1 346 0 1 804 1620 0 0 0 chrUextra 28797965 28798204 -206452 + (CAAGA)n Simple_repeat Simple_repeat 1 239 0 1 804 1533 6 0 0 chrUextra 28798304 28798478 -206178 + (TAGA)n Simple_repeat Simple_repeat 1 174 0 1 804 392 283 0 0 chrUextra 28798492 28798644 -206012 + (TAGA)n Simple_repeat Simple_repeat 3 154 0 1 804 1537 179 11 20 chrUextra 28798752 28799100 -205556 - SAR_DM Satellite Satellite -676 796 452 1 804 2779 52 0 6 chrUextra 28799648 28799994 -204662 + R1_DM LINE R1 257 600 -4756 1 804 1287 87 0 0 chrUextra 28800094 28800439 -204217 + (CTTAT)n Simple_repeat Simple_repeat 1 345 0 1 804 1620 0 0 0 chrUextra 28800541 28800855 -203801 + (GAGAA)n Simple_repeat Simple_repeat 1 314 0 1 804 462 18 0 0 chrUextra 28800988 28801043 -203613 + (TTCTC)n Simple_repeat Simple_repeat 3 57 0 1 804 294 129 0 0 chrUextra 28801043 28801105 -203551 + (AGTAG)n Simple_repeat Simple_repeat 4 65 0 1 804 978 119 0 36 chrUextra 28801435 28801713 -202943 + (CTATT)n Simple_repeat Simple_repeat 1 268 0 1 804 603 0 0 0 chrUextra 28801715 28801782 -202874 + (TTCTC)n Simple_repeat Simple_repeat 4 70 0 1 804 2207 31 41 3 chrUextra 28801882 28802155 -202501 + PROTOP DNA P 224 507 -3973 1 804 672 14 0 0 chrUextra 28802155 28802229 -202427 - PROTOP_B DNA P 0 1153 1080 1 804 1423 23 0 16 chrUextra 28802329 28802650 -202006 + (TATAA)n Simple_repeat Simple_repeat 1 315 0 1 804 225 0 0 0 chrUextra 28802651 28802675 -201981 + DM1731_LTR LTR Copia 2 25 -311 1 804 1527 35 0 0 chrUextra 28802775 28803121 -201535 + (AATAG)n Simple_repeat Simple_repeat 1 346 0 1 804 1011 3 0 79 chrUextra 28803689 28804007 -200649 + (GAGAA)n Simple_repeat Simple_repeat 1 292 0 1 804 1473 68 0 9 chrUextra 28804116 28804459 -200197 + (TTCTC)n Simple_repeat Simple_repeat 1 340 0 1 804 1538 27 0 6 chrUextra 28804566 28804905 -199751 + (CACAA)n Simple_repeat Simple_repeat 1 336 0 1 804 1554 52 0 0 chrUextra 28805005 28805348 -199308 + (ATCG)n Simple_repeat Simple_repeat 1 343 0 1 804 227 158 0 0 chrUextra 28805671 28805709 -198947 + LSU-rRNA_Dme rRNA rRNA 2583 2620 -1280 1 804 22 56 0 0 chrUextra 28805722 28805758 -198898 + AT_rich Low_complexity Low_complexity 1 36 0 1 804 1620 9 0 0 chrUextra 28805911 28806243 -198413 + (GAGAA)n Simple_repeat Simple_repeat 1 332 0 1 804 1924 83 32 15 chrUextra 28806343 28806686 -197970 + DMSAT6 Satellite Satellite 42 390 -80 1 804 202 265 0 0 chrUextra 28806810 28806859 -197797 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 804 1419 34 0 0 chrUextra 28807245 28807422 -197234 + (ACTTG)n Simple_repeat Simple_repeat 3 179 0 1 804 1236 26 0 0 chrUextra 28807424 28807576 -197080 + (ACTAG)n Simple_repeat Simple_repeat 4 155 0 1 804 326 208 11 70 chrUextra 28807726 28808020 -196636 + CT-rich Low_complexity Low_complexity 1 276 0 1 804 1620 0 0 0 chrUextra 28808124 28808458 -196198 + (GAGAA)n Simple_repeat Simple_repeat 1 334 0 1 804 373 398 6 17 chrUextra 28809173 28809352 -195304 + GA-rich Low_complexity Low_complexity 2 178 0 1 804 948 69 0 19 chrUextra 28809457 28809619 -195037 + (TTCTC)n Simple_repeat Simple_repeat 1 159 0 1 804 873 69 0 0 chrUextra 28809629 28809759 -194897 + (GAGAA)n Simple_repeat Simple_repeat 5 134 0 1 804 240 35 0 0 chrUextra 28809770 28809799 -194857 + (ACTAG)n Simple_repeat Simple_repeat 5 33 0 1 804 1611 6 0 0 chrUextra 28809901 28810245 -194411 + (GAGAA)n Simple_repeat Simple_repeat 1 344 0 1 804 1473 62 0 0 chrUextra 28810347 28810688 -193968 + (TATAA)n Simple_repeat Simple_repeat 1 341 0 1 804 1415 71 0 6 chrUextra 28810788 28811111 -193545 + (TTCTC)n Simple_repeat Simple_repeat 1 321 0 1 804 601 134 65 0 chrUextra 28811231 28811572 -193084 + GA-rich Low_complexity Low_complexity 1 363 0 1 804 1620 9 0 3 chrUextra 28811674 28812016 -192640 + (GAGAA)n Simple_repeat Simple_repeat 1 341 0 1 804 378 188 0 0 chrUextra 28812359 28812455 -192201 + (TTATG)n Simple_repeat Simple_repeat 2 97 0 1 804 202 265 0 0 chrUextra 28812579 28812628 -192028 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 804 675 0 0 0 chrUextra 28813002 28813077 -191579 + (TATTG)n Simple_repeat Simple_repeat 2 76 0 1 804 528 56 0 0 chrUextra 28813077 28813148 -191508 + (TTATA)n Simple_repeat Simple_repeat 1 72 0 1 804 1590 6 0 0 chrUextra 28813148 28813326 -191330 + (CATTA)n Simple_repeat Simple_repeat 2 180 0 1 804 1587 27 0 0 chrUextra 28813444 28813785 -190871 + (CAATA)n Simple_repeat Simple_repeat 1 341 0 1 804 1101 64 0 12 chrUextra 28814326 28814667 -189989 + (ATAAG)n Simple_repeat Simple_repeat 1 336 0 1 804 990 116 0 0 chrUextra 28814769 28815108 -189548 + (CATGT)n Simple_repeat Simple_repeat 1 339 0 1 804 1071 56 0 0 chrUextra 28815208 28815351 -189305 + (CACAT)n Simple_repeat Simple_repeat 3 145 0 1 804 1383 50 0 0 chrUextra 28815351 28815531 -189125 + (CACAA)n Simple_repeat Simple_repeat 1 180 0 1 804 195 129 0 0 chrUextra 28815649 28815680 -188976 + (CTAGG)n Simple_repeat Simple_repeat 2 32 0 1 804 1620 0 0 0 chrUextra 28815706 28815990 -188666 + (TTCTC)n Simple_repeat Simple_repeat 1 284 0 1 804 605 155 49 10 chrUextra 28816112 28816423 -188233 + CT-rich Low_complexity Low_complexity 1 323 0 1 804 1218 90 0 0 chrUextra 28816531 28816709 -187947 + (CATCT)n Simple_repeat Simple_repeat 3 180 0 1 804 735 137 0 0 chrUextra 28816711 28816872 -187784 + (TCTCG)n Simple_repeat Simple_repeat 5 165 0 1 804 653 161 41 9 chrUextra 28816972 28817311 -187345 + CT-rich Low_complexity Low_complexity 1 349 0 1 804 1536 18 0 4 chrUextra 28817412 28817692 -186964 + (GAGAA)n Simple_repeat Simple_repeat 1 278 0 1 804 414 0 0 0 chrUextra 28817851 28817897 -186759 + (TTCTC)n Simple_repeat Simple_repeat 1 46 0 1 804 198 0 0 0 chrUextra 28817902 28817924 -186732 + (CGAGA)n Simple_repeat Simple_repeat 4 25 0 1 804 1545 11 0 0 chrUextra 28817925 28818104 -186552 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 804 391 101 0 25 chrUextra 28818105 28818186 -186470 + (CGAGA)n Simple_repeat Simple_repeat 2 80 0 1 804 468 0 136 0 chrUextra 28818295 28818427 -186229 + (TC)n Simple_repeat Simple_repeat 2 151 0 1 804 559 144 60 6 chrUextra 28818451 28818619 -186037 + CT-rich Low_complexity Low_complexity 2 178 0 1 804 1232 62 6 0 chrUextra 28818728 28818907 -185749 + (ATAAG)n Simple_repeat Simple_repeat 1 180 0 1 804 984 103 0 0 chrUextra 28818907 28819062 -185594 + (GAAAA)n Simple_repeat Simple_repeat 1 156 0 1 804 1620 3 0 0 chrUextra 28819166 28819495 -185161 + (TCTA)n Simple_repeat Simple_repeat 1 329 0 1 804 1521 15 0 0 chrUextra 28819603 28819937 -184719 + (CTATT)n Simple_repeat Simple_repeat 1 334 0 1 804 378 130 0 78 chrUextra 28820040 28820114 -184542 + polypyrimidine Low_complexity Low_complexity 71 134 0 1 804 1296 51 0 0 chrUextra 28820114 28820291 -184365 + (TTCTC)n Simple_repeat Simple_repeat 1 177 0 1 804 378 130 0 78 chrUextra 28820291 28820358 -184298 + polypyrimidine Low_complexity Low_complexity 4 70 0 1 804 511 129 44 31 chrUextra 28821350 28821418 -183238 + polypurine Low_complexity Low_complexity 5 73 0 1 804 1375 29 6 11 chrUextra 28821418 28821595 -183061 + (GAGAA)n Simple_repeat Simple_repeat 5 180 0 1 804 511 129 44 31 chrUextra 28821595 28821686 -182970 + polypurine Low_complexity Low_complexity 74 166 0 1 804 1601 144 28 21 chrUextra 28821791 28822117 -182539 - SAR_DM Satellite Satellite -416 1056 729 1 804 1620 27 0 0 chrUextra 28822223 28822553 -182103 + (GAGAA)n Simple_repeat Simple_repeat 1 330 0 1 804 1917 5 0 0 chrUextra 28822785 28822992 -181664 - LSU-rRNA_Dme rRNA rRNA -5 3895 3689 1 804 233 0 0 161 chrUextra 28823530 28823741 -180915 + (CACAA)n Simple_repeat Simple_repeat 4 180 0 1 804 297 239 18 0 chrUextra 28823743 28823856 -180800 + (CAAA)n Simple_repeat Simple_repeat 4 118 0 1 804 258 0 0 0 chrUextra 28823960 28823994 -180662 + NTS_DM Other Other 100 133 -107 1 804 1276 43 0 6 chrUextra 28823994 28824159 -180497 + NTS_DM Other Other 38 201 -39 1 804 600 38 12 36 chrUextra 28824211 28824294 -180362 + NTS_DM Other Other 25 105 -135 1 804 1488 55 10 0 chrUextra 28824394 28824705 -179951 + (GAGAA)n Simple_repeat Simple_repeat 1 313 0 1 804 1782 87 22 10 chrUextra 28824846 28825158 -179498 - DMSAT6 Satellite Satellite -23 447 132 1 804 2248 72 3 3 chrUextra 28825262 28825596 -179060 + PROTOP DNA P 490 823 -3657 1 804 1679 18 18 22 chrUextra 28825696 28825919 -178737 + NTS_DM Other Other 19 240 0 1 804 994 18 0 0 chrUextra 28825919 28826030 -178626 + NTS_DM Other Other 1 111 -129 1 804 1422 42 0 0 chrUextra 28826130 28826393 -178263 + (CTTAT)n Simple_repeat Simple_repeat 1 263 0 1 804 360 97 0 0 chrUextra 28826398 28826460 -178196 + (TTCTC)n Simple_repeat Simple_repeat 5 66 0 1 804 1430 52 0 6 chrUextra 28826563 28826894 -177762 + (CACAA)n Simple_repeat Simple_repeat 1 329 0 1 804 1620 0 0 0 chrUextra 28826996 28827285 -177371 + (GAGAA)n Simple_repeat Simple_repeat 1 289 0 1 804 1545 23 0 0 chrUextra 28827862 28828165 -176491 + (TATAA)n Simple_repeat Simple_repeat 1 303 0 1 804 1580 9 0 3 chrUextra 28828728 28829057 -175599 + (GAGAA)n Simple_repeat Simple_repeat 1 328 0 1 804 1494 34 0 0 chrUextra 28829160 28829397 -175259 + (CACAA)n Simple_repeat Simple_repeat 1 237 0 1 804 644 0 0 13 chrUextra 28829415 28829492 -175164 + (CACAA)n Simple_repeat Simple_repeat 3 78 0 1 804 1100 46 0 7 chrUextra 28829592 28829744 -174912 + (TTCTC)n Simple_repeat Simple_repeat 1 151 0 1 804 939 86 0 0 chrUextra 28829753 28829905 -174751 + (GAGAA)n Simple_repeat Simple_repeat 2 153 0 1 804 261 157 0 44 chrUextra 28830030 28830070 -174586 + polypurine Low_complexity Low_complexity 1 38 0 1 804 1041 96 0 0 chrUextra 28830070 28830248 -174408 + (GAGAA)n Simple_repeat Simple_repeat 1 178 0 1 804 261 157 0 44 chrUextra 28830248 28830320 -174336 + GA-rich Low_complexity Low_complexity 39 108 0 1 804 573 15 0 0 chrUextra 28830456 28830522 -174134 + (CAAGA)n Simple_repeat Simple_repeat 3 68 0 1 804 1028 30 0 8 chrUextra 28830888 28831021 -173635 + (TTCTC)n Simple_repeat Simple_repeat 1 132 0 1 804 984 106 0 0 chrUextra 28831038 28831217 -173439 + (CGAGA)n Simple_repeat Simple_repeat 2 180 0 1 804 429 36 0 0 chrUextra 28831319 28831374 -173282 + (TTCTC)n Simple_repeat Simple_repeat 5 59 0 1 804 737 146 38 8 chrUextra 28831382 28831650 -173006 + GA-rich Low_complexity Low_complexity 1 276 0 1 804 1521 30 0 4 chrUextra 28831759 28832025 -172631 + (TTCTC)n Simple_repeat Simple_repeat 1 264 0 1 804 228 100 0 0 chrUextra 28832041 28832081 -172575 + (CAGTA)n Simple_repeat Simple_repeat 3 42 0 1 804 1620 0 0 0 chrUextra 28832181 28832485 -172171 + (GAGAA)n Simple_repeat Simple_repeat 1 304 0 1 804 766 87 0 14 chrUextra 28832612 28832752 -171904 + (TCTTG)n Simple_repeat Simple_repeat 3 140 0 1 804 1620 0 0 0 chrUextra 28832760 28832940 -171716 + (CTAGT)n Simple_repeat Simple_repeat 1 180 0 1 804 551 0 124 12 chrUextra 28833046 28833207 -171449 + (GA)n Simple_repeat Simple_repeat 2 180 0 1 804 602 151 40 17 chrUextra 28833196 28833371 -171285 + GA-rich Low_complexity Low_complexity 2 180 0 1 804 381 22 0 0 chrUextra 28833474 28833520 -171136 + (TTCTC)n Simple_repeat Simple_repeat 5 50 0 1 804 551 0 128 8 chrUextra 28833532 28833804 -170852 + (GA)n Simple_repeat Simple_repeat 1 304 0 1 804 202 265 0 0 chrUextra 28833913 28833962 -170694 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 804 2362 45 0 3 chrUextra 28834336 28834667 -169989 + PROTOP_A DNA P 378 707 -398 1 804 276 111 0 0 chrUextra 28834767 28834812 -169844 + (CTG)n Simple_repeat Simple_repeat 1 45 0 1 804 663 0 0 0 chrUextra 28834812 28834901 -169755 - ROO_I LTR Pao -7616 640 552 1 804 610 206 0 11 chrUextra 28834906 28835097 -169559 - ROO_I LTR Pao -7680 576 388 1 804 336 239 19 75 chrUextra 28835198 28835525 -169131 + CT-rich Low_complexity Low_complexity 1 308 0 1 100 1566 0 0 0 chrUextra 28835782 28835956 -168700 + (TTCTC)n Simple_repeat Simple_repeat 5 178 0 1 805 1547 17 0 7 chrUextra 28836084 28836385 -168271 + (TTCTC)n Simple_repeat Simple_repeat 1 299 0 1 805 1599 15 0 0 chrUextra 28836488 28836814 -167842 + (TCTA)n Simple_repeat Simple_repeat 1 326 0 1 805 544 135 57 22 chrUextra 28836923 28837242 -167414 + GA-rich Low_complexity Low_complexity 1 330 0 1 805 1300 71 0 12 chrUextra 28837343 28837672 -166984 + (TAGA)n Simple_repeat Simple_repeat 1 324 0 1 805 1620 3 0 0 chrUextra 28838201 28838530 -166126 + (GAGAA)n Simple_repeat Simple_repeat 1 329 0 1 805 1620 0 0 0 chrUextra 28838651 28838831 -165825 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 805 564 110 64 29 chrUextra 28839059 28839379 -165277 + CT-rich Low_complexity Low_complexity 1 331 0 1 805 489 190 0 0 chrUextra 28839912 28840012 -164644 + (CTGTG)n Simple_repeat Simple_repeat 4 103 0 1 805 317 26 0 0 chrUextra 28840012 28840050 -164606 + (CAACG)n Simple_repeat Simple_repeat 3 40 0 1 805 1419 34 0 0 chrUextra 28840050 28840227 -164429 + (CACAA)n Simple_repeat Simple_repeat 3 179 0 1 805 202 265 0 0 chrUextra 28840345 28840394 -164262 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 805 812 65 0 8 chrUextra 28840783 28840908 -163748 + (TCTTG)n Simple_repeat Simple_repeat 4 127 0 1 805 1251 62 0 0 chrUextra 28840915 28841093 -163563 + (CATGT)n Simple_repeat Simple_repeat 3 180 0 1 805 307 51 0 0 chrUextra 28841193 28841232 -163424 - NTS_DM Other Other -176 64 26 1 805 1142 37 0 18 chrUextra 28841289 28841456 -163200 - NTS_DM Other Other -39 201 38 1 805 461 47 0 0 chrUextra 28841456 28841520 -163136 - NTS_DM Other Other -107 133 70 1 805 274 0 0 159 chrUextra 28842504 28842642 -162014 + (CAAAG)n Simple_repeat Simple_repeat 1 116 0 1 805 183 0 0 159 chrUextra 28842644 28842795 -161861 + (CAAGA)n Simple_repeat Simple_repeat 2 128 0 1 805 345 11 0 163 chrUextra 28842897 28843112 -161544 + (CATCT)n Simple_repeat Simple_repeat 1 180 0 1 805 221 15 308 0 chrUextra 28843087 28843220 -161436 + (TCCA)n Simple_repeat Simple_repeat 3 176 0 1 805 1620 0 0 0 chrUextra 28843747 28843955 -160701 + (TAGA)n Simple_repeat Simple_repeat 1 208 0 1 805 468 152 0 0 chrUextra 28843955 28844072 -160584 + (ATCG)n Simple_repeat Simple_repeat 3 120 0 1 805 1250 55 0 4 chrUextra 28844172 28844429 -160227 + (TTCTC)n Simple_repeat Simple_repeat 1 255 0 1 805 315 65 0 0 chrUextra 28844429 28844475 -160181 + (CACAA)n Simple_repeat Simple_repeat 5 50 0 1 805 198 0 0 0 chrUextra 28844475 28844497 -160159 + (GAGAA)n Simple_repeat Simple_repeat 1 22 0 1 805 1348 32 0 6 chrUextra 28844597 28844922 -159734 + (TTCTC)n Simple_repeat Simple_repeat 1 322 0 1 805 2710 9 0 3 chrUextra 28845022 28845346 -159310 + R1_DM LINE R1 4607 4929 -427 1 805 34 0 0 0 chrUextra 28845446 28845480 -159176 + AT_rich Low_complexity Low_complexity 1 34 0 1 805 339 51 114 14 chrUextra 28845523 28845663 -158993 + (TA)n Simple_repeat Simple_repeat 2 155 0 1 805 668 35 0 0 chrUextra 28845683 28845770 -158886 - DIVER_LTR LTR Pao 0 224 138 1 805 705 12 0 0 chrUextra 28845870 28845952 -158704 + (TTCTC)n Simple_repeat Simple_repeat 2 83 0 1 805 1521 26 0 9 chrUextra 28845956 28846186 -158470 + (GAGAA)n Simple_repeat Simple_repeat 1 228 0 1 805 534 16 0 0 chrUextra 28846294 28846357 -158299 + (TTGTG)n Simple_repeat Simple_repeat 1 63 0 1 805 1227 67 0 0 chrUextra 28846358 28846537 -158119 + (ATGTG)n Simple_repeat Simple_repeat 1 179 0 1 805 561 88 0 0 chrUextra 28846538 28846618 -158038 + (TTGTG)n Simple_repeat Simple_repeat 1 80 0 1 805 2138 44 6 9 chrUextra 28846718 28847042 -157614 + PROTOP_A DNA P 497 819 -286 1 805 636 130 56 0 chrUextra 28847212 28847373 -157283 + CT-rich Low_complexity Low_complexity 5 174 0 1 805 414 79 0 0 chrUextra 28847399 28847462 -157194 + (GAGAA)n Simple_repeat Simple_repeat 2 64 0 1 805 1224 63 0 0 chrUextra 28847565 28847820 -156836 + (GAGAA)n Simple_repeat Simple_repeat 1 255 0 1 805 311 119 0 15 chrUextra 28847820 28847888 -156768 + (CGAGA)n Simple_repeat Simple_repeat 2 68 0 1 805 461 167 6 85 chrUextra 28848411 28848729 -155927 + CT-rich Low_complexity Low_complexity 1 293 0 1 805 1279 48 3 3 chrUextra 28848834 28849157 -155499 + (CTTAT)n Simple_repeat Simple_repeat 1 323 0 1 805 1269 90 0 0 chrUextra 28849258 28849573 -155083 + (CAATA)n Simple_repeat Simple_repeat 1 315 0 1 805 1620 0 0 0 chrUextra 28849694 28849874 -154782 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 805 202 265 0 0 chrUextra 28850103 28850152 -154504 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 805 831 37 0 0 chrUextra 28850524 28850631 -154025 + (TTCTC)n Simple_repeat Simple_repeat 4 110 0 1 805 1521 17 0 0 chrUextra 28850662 28850842 -153814 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 805 1572 104 47 16 chrUextra 28850947 28851268 -153388 + DMSAT6 Satellite Satellite 9 339 -131 1 805 1663 92 41 16 chrUextra 28851370 28851690 -152966 - DMSAT6 Satellite Satellite -64 406 79 1 805 28 48 0 0 chrUextra 28851843 28851885 -152771 + AT_rich Low_complexity Low_complexity 1 42 0 1 805 1116 17 0 49 chrUextra 28852212 28852396 -152260 + (TTCTC)n Simple_repeat Simple_repeat 2 176 0 1 805 782 41 0 31 chrUextra 28852407 28852534 -152122 + (TTCTC)n Simple_repeat Simple_repeat 5 127 0 1 805 1117 58 6 28 chrUextra 28852640 28852819 -151837 + (TTCTC)n Simple_repeat Simple_repeat 5 179 0 1 805 224 14 107 27 chrUextra 28852821 28852896 -151760 + (TC)n Simple_repeat Simple_repeat 2 82 0 1 805 21 0 0 0 chrUextra 28853311 28853332 -151324 + AT_rich Low_complexity Low_complexity 1 21 0 1 805 1620 0 0 0 chrUextra 28853528 28853797 -150859 + (TTCTC)n Simple_repeat Simple_repeat 1 269 0 1 805 572 11 0 137 chrUextra 28853903 28854218 -150438 + (TAAAAA)n Simple_repeat Simple_repeat 1 271 0 1 805 1620 0 0 0 chrUextra 28854318 28854594 -150062 + (GAGAA)n Simple_repeat Simple_repeat 1 276 0 1 805 336 24 0 0 chrUextra 28854595 28854636 -150020 + (ATAAG)n Simple_repeat Simple_repeat 5 45 0 1 805 436 0 137 0 chrUextra 28854744 28854868 -149788 + (TC)n Simple_repeat Simple_repeat 2 142 0 1 805 581 147 53 6 chrUextra 28854844 28855015 -149641 + CT-rich Low_complexity Low_complexity 1 179 0 1 805 346 159 0 0 chrUextra 28855159 28855228 -149428 + (TCTCTG)n Simple_repeat Simple_repeat 4 72 0 1 805 395 0 0 163 chrUextra 28855264 28855479 -149177 + (CTATG)n Simple_repeat Simple_repeat 1 180 0 1 805 1340 39 0 6 chrUextra 28855582 28855762 -148894 + (TTCTC)n Simple_repeat Simple_repeat 2 180 0 1 805 824 28 0 9 chrUextra 28855785 28855893 -148763 + (GAGAA)n Simple_repeat Simple_repeat 4 110 0 1 805 2426 22 3 12 chrUextra 28855999 28856319 -148337 - FB4_DM DNA Tc1 -136 3953 3637 1 805 865 11 0 87 chrUextra 28856419 28856615 -148041 + (GAGAA)n Simple_repeat Simple_repeat 2 180 0 1 805 345 83 8 76 chrUextra 28856615 28856733 -147923 + GA-rich Low_complexity Low_complexity 5 114 0 1 805 581 0 0 14 chrUextra 28856845 28856915 -147741 + (TTCTC)n Simple_repeat Simple_repeat 5 73 0 1 805 1479 22 0 0 chrUextra 28856935 28857159 -147497 + (TTCTC)n Simple_repeat Simple_repeat 1 224 0 1 805 1401 6 0 0 chrUextra 28857259 28857417 -147239 + (GAGAA)n Simple_repeat Simple_repeat 2 159 0 1 805 506 52 0 136 chrUextra 28857679 28857996 -146660 + A-rich Low_complexity Low_complexity 1 273 0 1 805 1382 58 0 4 chrUextra 28858099 28858380 -146276 + (TTCTC)n Simple_repeat Simple_repeat 1 279 0 1 805 243 79 0 0 chrUextra 28858381 28858419 -146237 + (CATCT)n Simple_repeat Simple_repeat 3 40 0 1 805 1554 8 0 8 chrUextra 28858519 28858760 -145896 + (ACATG)n Simple_repeat Simple_repeat 1 238 0 1 805 437 80 0 13 chrUextra 28858762 28858838 -145818 + (AGATG)n Simple_repeat Simple_repeat 4 78 0 1 805 1620 13 0 0 chrUextra 28858940 28859255 -145401 + (GAGAA)n Simple_repeat Simple_repeat 1 315 0 1 805 588 6 0 137 chrUextra 28859358 28859563 -145093 + (TAAAAA)n Simple_repeat Simple_repeat 2 178 0 1 805 266 167 123 14 chrUextra 28859518 28859664 -144992 + (CAAA)n Simple_repeat Simple_repeat 2 163 0 1 805 1620 0 0 0 chrUextra 28859776 28859956 -144700 + (ATCG)n Simple_repeat Simple_repeat 1 180 0 1 805 1004 0 9 0 chrUextra 28859979 28860095 -144561 + (CGATA)n Simple_repeat Simple_repeat 1 117 0 1 805 552 30 0 0 chrUextra 28860195 28860261 -144395 + (CACAA)n Simple_repeat Simple_repeat 4 69 0 1 805 1383 62 0 4 chrUextra 28860272 28860513 -144143 + (CACAA)n Simple_repeat Simple_repeat 1 240 0 1 805 1620 4 0 0 chrUextra 28860613 28860862 -143794 + (TCTTG)n Simple_repeat Simple_repeat 1 249 0 1 805 1620 0 0 0 chrUextra 28861031 28861305 -143351 + (GAGAA)n Simple_repeat Simple_repeat 1 274 0 1 805 453 19 0 0 chrUextra 28861449 28861503 -143153 + (CTTAT)n Simple_repeat Simple_repeat 2 55 0 1 805 1430 41 0 4 chrUextra 28861514 28861764 -142892 + (CTTAT)n Simple_repeat Simple_repeat 1 248 0 1 805 215 4 0 161 chrUextra 28861868 28862181 -142475 + (TATAG)n Simple_repeat Simple_repeat 1 262 0 1 805 1446 38 0 0 chrUextra 28862283 28862600 -142056 + (AATAG)n Simple_repeat Simple_repeat 1 317 0 1 805 1545 15 0 4 chrUextra 28862700 28862961 -141695 + (CTATT)n Simple_repeat Simple_repeat 1 260 0 1 805 306 50 0 0 chrUextra 28862977 28863017 -141639 + (CTATT)n Simple_repeat Simple_repeat 1 40 0 1 805 395 0 0 163 chrUextra 28863627 28863842 -140814 + (CATAG)n Simple_repeat Simple_repeat 1 180 0 1 805 543 53 0 0 chrUextra 28863949 28864024 -140632 + (TTCTC)n Simple_repeat Simple_repeat 5 79 0 1 805 1239 62 0 0 chrUextra 28864040 28864218 -140438 + (GAGAA)n Simple_repeat Simple_repeat 3 180 0 1 805 225 108 0 0 chrUextra 28864228 28864265 -140391 + (CGAGA)n Simple_repeat Simple_repeat 2 38 0 1 805 2634 16 3 0 chrUextra 28864781 28865097 -139559 + NOMAD_I LTR Gypsy 2538 2854 -3718 1 805 1422 73 0 3 chrUextra 28865197 28865510 -139146 + (TAGA)n Simple_repeat Simple_repeat 1 311 0 1 805 1620 0 0 0 chrUextra 28865622 28865802 -138854 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 805 961 165 9 27 chrUextra 28866029 28866253 -138403 + SAR_DM Satellite Satellite 837 1056 -416 1 805 324 0 0 0 chrUextra 28866253 28866289 -138367 + (T)n Simple_repeat Simple_repeat 1 36 0 1 805 305 157 0 0 chrUextra 28866291 28866342 -138314 + IVK_DM LINE I 1 51 -5351 1 805 567 71 0 0 chrUextra 28866448 28866533 -138123 + (TTCTC)n Simple_repeat Simple_repeat 4 88 0 1 805 1533 14 0 0 chrUextra 28866535 28866761 -137895 + (CTTAT)n Simple_repeat Simple_repeat 1 226 0 1 805 1470 25 0 0 chrUextra 28866861 28867176 -137480 + (ATAAG)n Simple_repeat Simple_repeat 1 315 0 1 805 631 97 9 9 chrUextra 28867276 28867339 -137317 + (AGATG)n Simple_repeat Simple_repeat 2 65 0 1 805 1455 28 0 0 chrUextra 28867339 28867519 -137137 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 805 631 97 9 9 chrUextra 28867519 28867570 -137086 + (AGATG)n Simple_repeat Simple_repeat 1 51 0 1 805 36 0 0 0 chrUextra 28867860 28867896 -136760 + AT_rich Low_complexity Low_complexity 1 36 0 1 805 660 134 47 6 chrUextra 28868114 28868286 -136370 + GA-rich Low_complexity Low_complexity 1 179 0 1 805 287 0 0 134 chrUextra 28868295 28868414 -136242 + (CAGAGA)n Simple_repeat Simple_repeat 6 108 0 1 805 1474 18 0 11 chrUextra 28868524 28868807 -135849 + (GAGAA)n Simple_repeat Simple_repeat 1 280 0 1 805 1158 78 0 0 chrUextra 28868942 28869122 -135534 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 805 489 88 0 0 chrUextra 28869123 28869203 -135453 + (CATCT)n Simple_repeat Simple_repeat 3 82 0 1 805 342 0 0 0 chrUextra 28869210 28869248 -135408 + (GAGAA)n Simple_repeat Simple_repeat 2 39 0 1 805 1481 17 0 6 chrUextra 28869367 28869548 -135108 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 805 597 76 0 0 chrUextra 28869553 28869645 -135011 + (ATAAG)n Simple_repeat Simple_repeat 5 96 0 1 805 1422 39 0 0 chrUextra 28870176 28870485 -134171 + (GAGAA)n Simple_repeat Simple_repeat 1 309 0 1 805 1429 22 0 16 chrUextra 28870592 28870775 -133881 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 805 741 65 0 0 chrUextra 28870795 28870903 -133753 + (GAGAA)n Simple_repeat Simple_repeat 3 110 0 1 805 233 0 0 161 chrUextra 28871006 28871217 -133439 + (CAAGA)n Simple_repeat Simple_repeat 2 178 0 1 805 460 224 0 10 chrUextra 28871217 28871316 -133340 + (CAGAGA)n Simple_repeat Simple_repeat 4 101 0 1 805 1413 68 0 6 chrUextra 28871416 28871729 -132927 + (TTCTC)n Simple_repeat Simple_repeat 1 311 0 1 805 1210 78 0 7 chrUextra 28871830 28872140 -132516 + (TTCTC)n Simple_repeat Simple_repeat 1 307 0 1 805 422 174 55 9 chrUextra 28872244 28872472 -132184 + GA-rich Low_complexity Low_complexity 1 238 0 1 805 237 203 34 0 chrUextra 28872495 28872554 -132102 + A-rich Low_complexity Low_complexity 2 62 0 1 805 1296 71 0 0 chrUextra 28872685 28872917 -131739 + (TTCTC)n Simple_repeat Simple_repeat 1 232 0 1 805 396 0 0 0 chrUextra 28872924 28872968 -131688 + (GAGAA)n Simple_repeat Simple_repeat 5 48 0 1 805 375 35 0 124 chrUextra 28873068 28873197 -131459 + T-rich Low_complexity Low_complexity 2 114 0 1 805 227 245 0 0 chrUextra 28873504 28873553 -131103 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 805 24 0 0 0 chrUextra 28874416 28874440 -130216 + AT_rich Low_complexity Low_complexity 1 24 0 1 805 1548 0 0 0 chrUextra 28874717 28874934 -129722 + (GAGAA)n Simple_repeat Simple_repeat 1 217 0 1 805 1545 26 0 3 chrUextra 28875129 28875440 -129216 + (TTCTC)n Simple_repeat Simple_repeat 1 310 0 1 805 1620 0 0 0 chrUextra 28875541 28875745 -128911 + (TAGA)n Simple_repeat Simple_repeat 1 204 0 1 805 351 157 0 0 chrUextra 28875771 28875841 -128815 + (TAGA)n Simple_repeat Simple_repeat 3 72 0 1 805 1587 6 0 0 chrUextra 28875952 28876132 -128524 + (TCTTG)n Simple_repeat Simple_repeat 1 180 0 1 805 777 93 0 0 chrUextra 28876133 28876262 -128394 + (ACTTG)n Simple_repeat Simple_repeat 1 129 0 1 805 1359 55 0 0 chrUextra 28876365 28876674 -127982 + (TTGTG)n Simple_repeat Simple_repeat 1 309 0 1 805 491 247 0 0 chrUextra 28876783 28876957 -127699 + (TTAA)n Simple_repeat Simple_repeat 2 175 0 1 805 1620 0 0 0 chrUextra 28877185 28877464 -127192 + (GAGAA)n Simple_repeat Simple_repeat 1 279 0 1 805 1335 58 0 3 chrUextra 28878415 28878717 -125939 + (GAGAA)n Simple_repeat Simple_repeat 1 300 0 1 805 1620 19 0 0 chrUextra 28878825 28879084 -125572 + (GAGAA)n Simple_repeat Simple_repeat 1 259 0 1 805 198 0 0 160 chrUextra 28879255 28879424 -125232 + (TCTTG)n Simple_repeat Simple_repeat 2 143 0 1 805 1620 3 0 7 chrUextra 28879645 28879942 -124714 + (TTCTC)n Simple_repeat Simple_repeat 1 294 0 1 805 2623 0 3 3 chrUextra 28880054 28880363 -124293 - R1_DM LINE R1 -2026 3330 3022 1 805 549 42 0 0 chrUextra 28880463 28880535 -124121 + (GAGAA)n Simple_repeat Simple_repeat 5 76 0 1 805 232 0 0 0 chrUextra 28880535 28880569 -124087 - Copia_LTR LTR Copia 0 276 243 1 805 1636 5 0 5 chrUextra 28880569 28880772 -123884 - Copia_LTR LTR Copia 0 276 75 1 805 1413 52 0 14 chrUextra 28880872 28881165 -123491 + (GAGAA)n Simple_repeat Simple_repeat 1 289 0 1 805 266 301 0 0 chrUextra 28881333 28881416 -123240 + A-rich Low_complexity Low_complexity 1 83 0 1 805 517 146 67 0 chrUextra 28881417 28881582 -123074 + GA-rich Low_complexity Low_complexity 5 180 0 1 805 204 125 0 0 chrUextra 28881692 28881724 -122932 + (CAGGT)n Simple_repeat Simple_repeat 5 36 0 1 805 1620 12 0 0 chrUextra 28881751 28881996 -122660 + (TTCTC)n Simple_repeat Simple_repeat 1 245 0 1 805 941 110 0 3 chrUextra 28882101 28882397 -122259 + (TTCTC)n Simple_repeat Simple_repeat 1 294 0 1 805 613 190 0 0 chrUextra 28882659 28882780 -121876 + DMRT1B LINE R1 2589 2709 -2474 1 805 284 116 0 0 chrUextra 28882771 28882814 -121842 + DMRT1B LINE R1 3671 3713 -1470 1 805 273 0 0 158 chrUextra 28882917 28883050 -121606 + (CAAGA)n Simple_repeat Simple_repeat 2 113 0 1 805 447 192 0 0 chrUextra 28883052 28883219 -121437 + (CATATA)n Simple_repeat Simple_repeat 6 172 0 1 805 1340 66 0 7 chrUextra 28883322 28883626 -121030 + (TTGTG)n Simple_repeat Simple_repeat 1 301 0 1 805 1455 30 0 0 chrUextra 28883730 28883964 -120692 + (CTTAT)n Simple_repeat Simple_repeat 1 234 0 1 805 489 17 0 0 chrUextra 28883964 28884021 -120635 + (TTCTC)n Simple_repeat Simple_repeat 5 62 0 1 805 1620 30 0 0 chrUextra 28884137 28884444 -120212 + (TTCTC)n Simple_repeat Simple_repeat 1 307 0 1 805 1566 0 0 0 chrUextra 28884544 28884718 -119938 + (GAGAA)n Simple_repeat Simple_repeat 2 175 0 1 805 2165 65 0 3 chrUextra 28884951 28885258 -119398 - DM176_I LTR Gypsy -2579 3841 3536 1 805 551 3 124 7 chrUextra 28885358 28885664 -118992 + (TA)n Simple_repeat Simple_repeat 1 341 0 1 805 498 17 0 0 chrUextra 28885764 28885823 -118833 + (TTCTC)n Simple_repeat Simple_repeat 5 63 0 1 805 1419 12 0 0 chrUextra 28885835 28886000 -118656 + (GAGAA)n Simple_repeat Simple_repeat 1 165 0 1 805 1535 44 0 15 chrUextra 28886170 28886376 -118280 - DOC3_DM LINE Jockey -64 4676 4474 1 805 598 31 0 10 chrUextra 28886378 28886476 -118180 - FW_DM LINE Jockey 0 4692 4596 1 805 1455 28 0 0 chrUextra 28886579 28886759 -117897 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 805 1128 86 0 0 chrUextra 28886982 28887288 -117368 + (GAGAA)n Simple_repeat Simple_repeat 1 306 0 1 805 1620 0 0 0 chrUextra 28887388 28887597 -117059 + (GAGAA)n Simple_repeat Simple_repeat 1 209 0 1 805 1521 37 0 4 chrUextra 28887794 28888067 -116589 + (GAGAA)n Simple_repeat Simple_repeat 1 272 0 1 805 202 265 0 0 chrUextra 28888218 28888267 -116389 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 805 396 296 0 0 chrUextra 28889022 28889276 -115380 + (CGA)n Simple_repeat Simple_repeat 1 254 0 1 805 1560 17 0 0 chrUextra 28889413 28889716 -114940 + (ATAAG)n Simple_repeat Simple_repeat 1 303 0 1 805 1620 0 0 0 chrUextra 28889816 28890075 -114581 + (CAAAA)n Simple_repeat Simple_repeat 1 259 0 1 805 1401 61 0 0 chrUextra 28890230 28890524 -114132 + (GAGAA)n Simple_repeat Simple_repeat 1 294 0 1 805 1312 44 0 7 chrUextra 28890626 28890928 -113728 + (AATAG)n Simple_repeat Simple_repeat 1 299 0 1 805 944 75 22 33 chrUextra 28891028 28891208 -113448 + (GAGAA)n Simple_repeat Simple_repeat 2 179 0 1 805 571 108 49 16 chrUextra 28891208 28891331 -113325 + GA-rich Low_complexity Low_complexity 3 129 0 1 805 219 227 0 0 chrUextra 28891431 28891497 -113159 + (CAAA)n Simple_repeat Simple_repeat 1 66 0 1 805 233 0 0 161 chrUextra 28891511 28891722 -112934 + (CACAA)n Simple_repeat Simple_repeat 4 180 0 1 805 2024 10 36 36 chrUextra 28891834 28892137 -112519 - MDG1_I LTR Gypsy -5233 1363 1061 1 805 1300 36 0 9 chrUextra 28892237 28892462 -112194 + (TTCTC)n Simple_repeat Simple_repeat 1 222 0 1 805 546 63 0 0 chrUextra 28892462 28892540 -112116 + (CTACT)n Simple_repeat Simple_repeat 1 79 0 1 805 1422 44 0 3 chrUextra 28892646 28892943 -111713 + (TTGTG)n Simple_repeat Simple_repeat 1 296 0 1 805 441 0 0 138 chrUextra 28893044 28893240 -111416 + (TCTCTG)n Simple_repeat Simple_repeat 6 174 0 1 805 230 134 60 0 chrUextra 28893276 28893343 -111313 + CT-rich Low_complexity Low_complexity 5 75 0 1 805 2566 0 0 7 chrUextra 28893446 28893748 -110908 + SSU-rRNA_Dme rRNA rRNA 840 1139 -856 1 805 1374 64 0 0 chrUextra 28893853 28894150 -110506 + (CACAA)n Simple_repeat Simple_repeat 1 297 0 1 805 1620 0 0 0 chrUextra 28895054 28895308 -109348 + (GAGAA)n Simple_repeat Simple_repeat 1 254 0 1 805 1368 35 0 0 chrUextra 28895456 28895630 -109026 + (TAGA)n Simple_repeat Simple_repeat 4 177 0 1 805 876 87 0 0 chrUextra 28895630 28895757 -108899 + (CGAT)n Simple_repeat Simple_repeat 1 127 0 1 805 1620 0 0 0 chrUextra 28895858 28896116 -108540 + (GAGAA)n Simple_repeat Simple_repeat 1 258 0 1 805 459 0 0 0 chrUextra 28896260 28896311 -108345 + (TTCTC)n Simple_repeat Simple_repeat 1 51 0 1 805 486 46 0 0 chrUextra 28896311 28896375 -108281 + (AGCTG)n Simple_repeat Simple_repeat 4 68 0 1 805 1422 33 0 0 chrUextra 28896377 28896557 -108099 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 805 1554 37 0 0 chrUextra 28896661 28896960 -107696 + (TTCTC)n Simple_repeat Simple_repeat 1 299 0 1 805 1587 30 0 0 chrUextra 28897061 28897360 -107296 + (GAGAA)n Simple_repeat Simple_repeat 1 299 0 1 805 1620 0 0 0 chrUextra 28897460 28897679 -106977 + (GAGAA)n Simple_repeat Simple_repeat 1 219 0 1 805 1345 24 30 30 chrUextra 28897859 28898158 -106498 + (GAGAA)n Simple_repeat Simple_repeat 1 299 0 1 805 577 142 59 6 chrUextra 28898264 28898434 -106222 + GA-rich Low_complexity Low_complexity 1 179 0 1 805 224 0 125 0 chrUextra 28898422 28898478 -106178 + (GA)n Simple_repeat Simple_repeat 2 64 0 1 805 260 13 130 0 chrUextra 28898478 28898555 -106101 + (CAGA)n Simple_repeat Simple_repeat 2 88 0 1 805 1029 8 0 0 chrUextra 28898657 28898775 -105881 + (TAGA)n Simple_repeat Simple_repeat 2 119 0 1 805 1358 55 0 6 chrUextra 28899058 28899239 -105417 + (TTCCC)n Simple_repeat Simple_repeat 1 180 0 1 805 252 0 0 0 chrUextra 28899239 28899266 -105390 + (TCCTG)n Simple_repeat Simple_repeat 2 29 0 1 805 192 135 0 0 chrUextra 28899270 28899307 -105349 + (TTCCC)n Simple_repeat Simple_repeat 4 40 0 1 805 282 87 0 0 chrUextra 28899308 28899354 -105302 + (CGCTG)n Simple_repeat Simple_repeat 4 49 0 1 805 1620 17 0 3 chrUextra 28899454 28899750 -104906 + (GAGAA)n Simple_repeat Simple_repeat 1 294 0 1 805 1557 17 0 0 chrUextra 28900250 28900548 -104108 + (TTCTC)n Simple_repeat Simple_repeat 1 298 0 1 805 201 0 122 0 chrUextra 28900648 28900697 -103959 + (TC)n Simple_repeat Simple_repeat 2 56 0 1 805 574 136 59 6 chrUextra 28900712 28900882 -103774 + GA-rich Low_complexity Low_complexity 1 179 0 1 805 1602 14 0 0 chrUextra 28901045 28901342 -103314 + (GAGAA)n Simple_repeat Simple_repeat 1 297 0 1 805 1620 0 0 0 chrUextra 28901442 28901691 -102965 + (GAGAA)n Simple_repeat Simple_repeat 1 249 0 1 805 1503 17 0 7 chrUextra 28901838 28902134 -102522 + (TTCTC)n Simple_repeat Simple_repeat 1 293 0 1 805 200 6 0 161 chrUextra 28902264 28902475 -102181 + (CACAA)n Simple_repeat Simple_repeat 4 180 0 1 805 2026 34 10 7 chrUextra 28902630 28902926 -101730 + PROTOP_A DNA P 529 825 -280 1 805 1620 0 0 0 chrUextra 28903029 28903247 -101409 + (TAGA)n Simple_repeat Simple_repeat 1 218 0 1 805 492 32 0 0 chrUextra 28903258 28903320 -101336 + (TAGA)n Simple_repeat Simple_repeat 4 65 0 1 805 2301 10 0 27 chrUextra 28903422 28903718 -100938 + G_DM LINE Jockey 3999 4286 -60 1 805 1224 51 0 0 chrUextra 28903818 28904052 -100604 + (GAGAA)n Simple_repeat Simple_repeat 1 234 0 1 805 243 79 0 0 chrUextra 28904075 28904113 -100543 + (CAGAA)n Simple_repeat Simple_repeat 2 39 0 1 805 681 95 0 0 chrUextra 28904213 28904329 -100327 + (ACTAG)n Simple_repeat Simple_repeat 4 119 0 1 805 1248 67 0 0 chrUextra 28904329 28904508 -100148 + (CAAGA)n Simple_repeat Simple_repeat 1 180 0 1 805 649 157 12 9 chrUextra 28904609 28904901 -99755 + SAR_DM Satellite Satellite 1 293 -738 1 805 502 11 0 165 chrUextra 28905067 28905279 -99377 + A-rich Low_complexity Low_complexity 2 178 0 1 805 1482 51 0 4 chrUextra 28905408 28905692 -98964 + (GAGAA)n Simple_repeat Simple_repeat 1 282 0 1 805 1427 49 0 3 chrUextra 28905794 28906086 -98570 + (CACAA)n Simple_repeat Simple_repeat 1 290 0 1 805 1595 55 0 17 chrUextra 28906186 28906480 -98176 + NOMAD_I LTR Gypsy 5565 5853 -719 1 805 630 37 0 0 chrUextra 28906580 28906661 -97995 + (GAGAA)n Simple_repeat Simple_repeat 2 82 0 1 805 1262 6 0 39 chrUextra 28906692 28906874 -97782 + (CAAG)n Simple_repeat Simple_repeat 2 176 0 1 805 1220 185 31 43 chrUextra 28906974 28907267 -97389 - SAR_DM Satellite Satellite -873 289 1 1 805 1232 7 0 0 chrUextra 28907367 28907512 -97144 - DMRT1B LINE R1 -557 4626 4482 1 805 1332 0 0 0 chrUextra 28907512 28907660 -96996 + (TTGTG)n Simple_repeat Simple_repeat 5 152 0 1 805 1455 50 0 7 chrUextra 28907760 28908044 -96612 + (TTCTC)n Simple_repeat Simple_repeat 1 282 0 1 805 2394 17 0 0 chrUextra 28908153 28908446 -96210 + ROO_I LTR Pao 3691 3983 -4273 1 805 1112 84 0 11 chrUextra 28908558 28908738 -95918 + (AATAG)n Simple_repeat Simple_repeat 1 178 0 1 805 900 0 0 0 chrUextra 28908739 28908839 -95817 + (GAGAA)n Simple_repeat Simple_repeat 2 101 0 1 805 1124 29 23 23 chrUextra 28908939 28909114 -95542 + NTS_DM Other Other 66 240 0 1 805 967 9 0 8 chrUextra 28909114 28909232 -95424 + NTS_DM Other Other 1 117 -123 1 805 1620 0 0 0 chrUextra 28909332 28909611 -95045 + (GAGAA)n Simple_repeat Simple_repeat 1 279 0 1 805 1587 6 0 0 chrUextra 28909733 28909913 -94743 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 805 372 176 0 0 chrUextra 28909914 28910016 -94640 + (AATAG)n Simple_repeat Simple_repeat 1 102 0 1 805 231 9 8 136 chrUextra 28910116 28910241 -94415 + (CAGAGA)n Simple_repeat Simple_repeat 6 114 0 1 805 398 136 57 40 chrUextra 28910232 28910408 -94248 + GA-rich Low_complexity Low_complexity 1 179 0 1 805 1620 3 0 0 chrUextra 28910508 28910790 -93866 + (TCTTG)n Simple_repeat Simple_repeat 1 282 0 1 805 1620 28 0 3 chrUextra 28910903 28911191 -93465 + (AATAG)n Simple_repeat Simple_repeat 1 286 0 1 805 1578 31 0 0 chrUextra 28911295 28911582 -93074 + (GAGAA)n Simple_repeat Simple_repeat 1 287 0 1 805 216 0 0 0 chrUextra 28911682 28911706 -92950 + (TTCTC)n Simple_repeat Simple_repeat 3 26 0 1 805 1536 36 0 0 chrUextra 28911721 28911971 -92685 + (GAGAA)n Simple_repeat Simple_repeat 1 250 0 1 805 1203 84 0 0 chrUextra 28912076 28912361 -92295 + (TTCTC)n Simple_repeat Simple_repeat 1 285 0 1 805 243 0 0 0 chrUextra 28912463 28912490 -92166 + (TCTG)n Simple_repeat Simple_repeat 1 27 0 1 805 1587 15 0 0 chrUextra 28912490 28912753 -91903 + (TCTA)n Simple_repeat Simple_repeat 1 263 0 1 805 2527 3 0 0 chrUextra 28912853 28913143 -91513 + SSU-rRNA_Dme rRNA rRNA 387 676 -1319 1 805 438 19 0 0 chrUextra 28913243 28913295 -91361 - NTS_DM Other Other -188 52 1 1 805 1480 15 19 19 chrUextra 28913295 28913503 -91153 - NTS_DM Other Other 0 240 33 1 805 1488 22 0 0 chrUextra 28913635 28913815 -90841 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 805 666 84 0 0 chrUextra 28913815 28913921 -90735 + (CTTAT)n Simple_repeat Simple_repeat 1 107 0 1 805 1356 44 0 0 chrUextra 28914413 28914593 -90063 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 805 392 146 0 10 chrUextra 28914593 28914697 -89959 + GA-rich Low_complexity Low_complexity 1 103 0 1 805 1620 57 0 0 chrUextra 28914798 28915081 -89575 + (TAGA)n Simple_repeat Simple_repeat 1 283 0 1 805 1620 4 0 0 chrUextra 28915184 28915448 -89208 + (GAGAA)n Simple_repeat Simple_repeat 1 264 0 1 805 1562 0 0 6 chrUextra 28915581 28915760 -88896 + (TCTCG)n Simple_repeat Simple_repeat 3 180 0 1 805 864 0 0 0 chrUextra 28915762 28915858 -88798 + (TCTTG)n Simple_repeat Simple_repeat 5 100 0 1 805 1578 10 0 0 chrUextra 28915958 28916245 -88411 + (GAGAA)n Simple_repeat Simple_repeat 1 287 0 1 805 1455 32 0 7 chrUextra 28916347 28916632 -88024 + (CTTAT)n Simple_repeat Simple_repeat 1 282 0 1 805 1559 18 0 3 chrUextra 28916732 28917017 -87639 + (GAGAA)n Simple_repeat Simple_repeat 1 284 0 1 805 855 29 0 0 chrUextra 28917119 28917221 -87435 + (TTGTG)n Simple_repeat Simple_repeat 4 105 0 1 805 1131 52 0 0 chrUextra 28917221 28917376 -87280 + (GAGAA)n Simple_repeat Simple_repeat 2 156 0 1 805 208 0 0 160 chrUextra 28917529 28917710 -86946 + (TTGTG)n Simple_repeat Simple_repeat 4 155 0 1 805 428 0 0 19 chrUextra 28917738 28917791 -86865 + (CACAA)n Simple_repeat Simple_repeat 4 55 0 1 805 581 147 53 6 chrUextra 28917892 28918063 -86593 + GA-rich Low_complexity Low_complexity 1 179 0 1 805 206 167 97 0 chrUextra 28918068 28918140 -86516 + (AGATG)n Simple_repeat Simple_repeat 3 81 0 1 805 1540 0 0 11 chrUextra 28918680 28918862 -85794 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 805 213 65 0 0 chrUextra 28918863 28918894 -85762 + (TCTCG)n Simple_repeat Simple_repeat 5 35 0 1 805 312 48 0 0 chrUextra 28918906 28918948 -85708 + (GAGAA)n Simple_repeat Simple_repeat 5 46 0 1 805 1620 18 0 0 chrUextra 28919048 28919333 -85323 + (CTTAT)n Simple_repeat Simple_repeat 1 285 0 1 805 1620 0 0 0 chrUextra 28919458 28919717 -84939 + (TTCTC)n Simple_repeat Simple_repeat 1 259 0 1 805 1356 67 0 3 chrUextra 28919817 28920101 -84555 + (GAGAA)n Simple_repeat Simple_repeat 1 283 0 1 805 577 142 59 6 chrUextra 28920202 28920372 -84284 + GA-rich Low_complexity Low_complexity 1 179 0 1 805 264 0 0 135 chrUextra 28920374 28920485 -84171 + (CAGAGA)n Simple_repeat Simple_repeat 6 101 0 1 805 1500 50 0 4 chrUextra 28920585 28920865 -83791 + (CTTAT)n Simple_repeat Simple_repeat 1 278 0 1 805 1620 46 0 3 chrUextra 28920969 28921253 -83403 + (TTCTC)n Simple_repeat Simple_repeat 1 283 0 1 805 1329 13 0 0 chrUextra 28921736 28921891 -82765 + (GAGAA)n Simple_repeat Simple_repeat 2 156 0 1 805 291 174 43 52 chrUextra 28922117 28922232 -82424 + GA-rich Low_complexity Low_complexity 1 114 0 1 805 1007 62 19 6 chrUextra 28922236 28922398 -82258 + (GAGAA)n Simple_repeat Simple_repeat 5 168 0 1 805 1458 0 0 0 chrUextra 28922498 28922660 -81996 + (TCTA)n Simple_repeat Simple_repeat 2 163 0 1 805 583 0 0 54 chrUextra 28922685 28922777 -81879 + (TCTA)n Simple_repeat Simple_repeat 4 90 0 1 805 768 11 0 0 chrUextra 28922879 28922968 -81688 + (TTCTC)n Simple_repeat Simple_repeat 1 89 0 1 805 1147 63 0 11 chrUextra 28922983 28923159 -81497 + (GAGAA)n Simple_repeat Simple_repeat 4 177 0 1 805 630 37 0 0 chrUextra 28923259 28923340 -81316 + (TCTCC)n Simple_repeat Simple_repeat 1 81 0 1 805 1654 0 5 0 chrUextra 28923342 28923539 -81117 - TABOR_LTR LTR Gypsy 0 506 309 1 805 2152 36 0 0 chrUextra 28923639 28923919 -80737 - DOC LINE Jockey -3485 1240 961 1 805 1488 29 0 4 chrUextra 28924020 28924299 -80357 + (TCTA)n Simple_repeat Simple_repeat 1 277 0 1 805 1422 47 0 0 chrUextra 28924399 28924677 -79979 + (ATAAG)n Simple_repeat Simple_repeat 1 278 0 1 805 1374 58 0 0 chrUextra 28924783 28924972 -79684 - ARS406_DM Unknown Unknown -164 189 1 1 805 1142 185 7 7 chrUextra 28924972 28925051 -79605 + SAR_DM Satellite Satellite 456 723 -749 1 805 1092 105 0 0 chrUextra 28925161 28925432 -79224 + (TTCTC)n Simple_repeat Simple_repeat 1 271 0 1 805 183 42 0 0 chrUextra 28925537 28925561 -79095 + (CTCGG)n Simple_repeat Simple_repeat 2 25 0 1 805 1554 20 0 4 chrUextra 28925561 28925815 -78841 + (TCTCG)n Simple_repeat Simple_repeat 1 253 0 1 805 278 196 31 10 chrUextra 28926294 28926392 -78264 + CT-rich Low_complexity Low_complexity 5 104 0 1 805 235 172 54 15 chrUextra 28926413 28926543 -78113 + GA-rich Low_complexity Low_complexity 5 139 0 1 805 1815 56 0 25 chrUextra 28926671 28926948 -77708 - I_DM LINE I -2213 4018 3749 1 805 1146 80 0 0 chrUextra 28927085 28927261 -77395 + (TCTTG)n Simple_repeat Simple_repeat 2 177 0 1 805 619 130 59 6 chrUextra 28927426 28927596 -77060 + GA-rich Low_complexity Low_complexity 1 179 0 1 805 344 0 112 20 chrUextra 28927591 28927689 -76967 + (GA)n Simple_repeat Simple_repeat 2 108 0 1 805 1275 57 0 0 chrUextra 28928180 28928357 -76299 + (TAGA)n Simple_repeat Simple_repeat 1 177 0 1 805 482 118 0 11 chrUextra 28928556 28928650 -76006 + (TTCTC)n Simple_repeat Simple_repeat 1 93 0 1 805 1371 57 0 0 chrUextra 28928653 28928830 -75826 + (TTTTC)n Simple_repeat Simple_repeat 1 177 0 1 805 2072 23 0 8 chrUextra 28929308 28929572 -75084 - Invader2_I LTR Gypsy -1466 3126 2865 1 805 1557 15 0 0 chrUextra 28929687 28929893 -74763 + (GAGAA)n Simple_repeat Simple_repeat 1 206 0 1 805 561 30 0 0 chrUextra 28929893 28929960 -74696 + (GGAGA)n Simple_repeat Simple_repeat 2 68 0 1 805 1103 15 0 8 chrUextra 28930060 28930193 -74463 + R1_DM LINE R1 5225 5356 0 1 805 636 128 9 0 chrUextra 28930226 28930335 -74321 + R1_DM LINE R1 1 110 -5246 1 805 441 0 0 0 chrUextra 28930435 28930484 -74172 + (TCTCC)n Simple_repeat Simple_repeat 4 52 0 1 805 562 19 110 12 chrUextra 28930825 28930988 -73668 + (GA)n Simple_repeat Simple_repeat 2 180 0 1 805 243 174 75 21 chrUextra 28930991 28931085 -73571 + (AGATG)n Simple_repeat Simple_repeat 3 101 0 1 805 1455 28 0 0 chrUextra 28931190 28931370 -73286 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 805 343 104 39 13 chrUextra 28931380 28931458 -73198 + CT-rich Low_complexity Low_complexity 5 84 0 1 805 529 152 50 8 chrUextra 28931573 28931835 -72821 + GA-rich Low_complexity Low_complexity 1 273 0 1 805 333 0 0 0 chrUextra 28931935 28931972 -72684 + (TTCTC)n Simple_repeat Simple_repeat 2 38 0 1 805 1488 22 0 0 chrUextra 28932011 28932191 -72465 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 805 1620 9 0 0 chrUextra 28932687 28932912 -71744 + (GAGAA)n Simple_repeat Simple_repeat 1 225 0 1 805 405 0 0 0 chrUextra 28932912 28932957 -71699 + (CAGAA)n Simple_repeat Simple_repeat 1 45 0 1 805 435 19 0 0 chrUextra 28933060 28933112 -71544 + (TTCTC)n Simple_repeat Simple_repeat 5 56 0 1 805 237 119 0 0 chrUextra 28933114 28933156 -71500 + (ACTAG)n Simple_repeat Simple_repeat 4 45 0 1 805 1560 11 0 0 chrUextra 28933156 28933334 -71322 + (GAGAA)n Simple_repeat Simple_repeat 1 178 0 1 805 1554 20 0 4 chrUextra 28933434 28933687 -70969 + (GAGAA)n Simple_repeat Simple_repeat 1 252 0 1 805 1020 141 0 0 chrUextra 28933808 28933985 -70671 + (CATA)n Simple_repeat Simple_repeat 4 180 0 1 805 276 226 0 0 chrUextra 28933986 28934079 -70577 + (CAGA)n Simple_repeat Simple_repeat 2 94 0 1 805 633 47 0 0 chrUextra 28934182 28934267 -70389 + (TCTA)n Simple_repeat Simple_repeat 1 85 0 1 805 1587 6 0 0 chrUextra 28934268 28934448 -70208 + (CTAG)n Simple_repeat Simple_repeat 1 180 0 1 805 1554 20 0 0 chrUextra 28934559 28934810 -69846 + (TTGTG)n Simple_repeat Simple_repeat 1 251 0 1 805 301 286 11 53 chrUextra 28935012 28935200 -69456 + (CCCA)n Simple_repeat Simple_repeat 1 180 0 1 805 1500 27 0 8 chrUextra 28935309 28935573 -69083 + (TCTA)n Simple_repeat Simple_repeat 1 261 0 1 805 1578 10 0 0 chrUextra 28935677 28935885 -68771 + (GAGAA)n Simple_repeat Simple_repeat 1 208 0 1 805 204 158 0 0 chrUextra 28935896 28935934 -68722 + (CAGAC)n Simple_repeat Simple_repeat 4 41 0 1 805 525 0 80 57 chrUextra 28936048 28936223 -68433 + (GA)n Simple_repeat Simple_repeat 2 180 0 1 805 220 39 0 135 chrUextra 28936225 28936314 -68342 + (CAGAGA)n Simple_repeat Simple_repeat 2 78 0 1 805 515 28 0 137 chrUextra 28936476 28936681 -67975 + A-rich Low_complexity Low_complexity 2 178 0 1 805 1620 0 0 0 chrUextra 28936787 28937036 -67620 + (GAGAA)n Simple_repeat Simple_repeat 1 249 0 1 805 1380 39 0 0 chrUextra 28937158 28937337 -67319 + (TAGA)n Simple_repeat Simple_repeat 2 180 0 1 805 255 169 0 0 chrUextra 28937351 28937422 -67234 + (CATA)n Simple_repeat Simple_repeat 1 71 0 1 805 205 25 47 81 chrUextra 28937532 28937618 -67038 + (TCTCTG)n Simple_repeat Simple_repeat 2 84 0 1 805 784 106 47 0 chrUextra 28937629 28937799 -66857 + CT-rich Low_complexity Low_complexity 2 179 0 1 805 351 167 0 0 chrUextra 28937900 28937990 -66666 + (TCTA)n Simple_repeat Simple_repeat 3 92 0 1 805 1301 30 0 6 chrUextra 28938002 28938169 -66487 + (TCTA)n Simple_repeat Simple_repeat 1 166 0 1 805 202 265 0 0 chrUextra 28938270 28938319 -66337 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 805 548 6 116 18 chrUextra 28938714 28938878 -65778 + (GA)n Simple_repeat Simple_repeat 1 180 0 1 805 272 232 0 10 chrUextra 28939048 28939148 -65508 + (TATATG)n Simple_repeat Simple_repeat 6 104 0 1 805 352 254 0 0 chrUextra 28939148 28939274 -65382 + (TTTG)n Simple_repeat Simple_repeat 4 129 0 1 805 1209 78 0 0 chrUextra 28939377 28939646 -65010 + (GAGAA)n Simple_repeat Simple_repeat 1 269 0 1 805 642 47 0 0 chrUextra 28939746 28939832 -64824 + (TTCTC)n Simple_repeat Simple_repeat 5 90 0 1 805 1587 6 0 0 chrUextra 28939835 28940015 -64641 + (CAACT)n Simple_repeat Simple_repeat 1 180 0 1 805 1536 19 0 0 chrUextra 28940115 28940384 -64272 + (GAGAA)n Simple_repeat Simple_repeat 1 269 0 1 805 213 118 59 0 chrUextra 28940484 28940535 -64121 + CT-rich Low_complexity Low_complexity 5 58 0 1 805 1434 33 0 0 chrUextra 28940540 28940720 -63936 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 805 1599 5 0 0 chrUextra 28940906 28941120 -63536 + (TTCTC)n Simple_repeat Simple_repeat 1 214 0 1 805 1620 0 0 0 chrUextra 28941220 28941434 -63222 + (GAGAA)n Simple_repeat Simple_repeat 1 214 0 1 805 1620 0 0 0 chrUextra 28941594 28941774 -62882 + (CAAGA)n Simple_repeat Simple_repeat 1 180 0 1 805 1326 40 0 0 chrUextra 28941968 28942141 -62515 + (TTCTC)n Simple_repeat Simple_repeat 1 173 0 1 805 492 32 0 0 chrUextra 28942155 28942217 -62439 + (GAGAA)n Simple_repeat Simple_repeat 5 66 0 1 805 1319 70 0 4 chrUextra 28942328 28942587 -62069 + (GAGAA)n Simple_repeat Simple_repeat 1 257 0 1 805 1620 0 0 0 chrUextra 28942692 28942916 -61740 + (GAGAA)n Simple_repeat Simple_repeat 1 224 0 1 805 1620 0 0 0 chrUextra 28943059 28943303 -61353 + (GAGAA)n Simple_repeat Simple_repeat 1 244 0 1 805 202 163 47 0 chrUextra 28943429 28943472 -61184 + CT-rich Low_complexity Low_complexity 5 49 0 1 805 516 0 81 58 chrUextra 28943476 28943650 -61006 + (TC)n Simple_repeat Simple_repeat 1 178 0 1 805 252 0 0 0 chrUextra 28943662 28943690 -60966 + (GAGAA)n Simple_repeat Simple_repeat 2 29 0 1 805 577 142 59 6 chrUextra 28943794 28943964 -60692 + GA-rich Low_complexity Low_complexity 1 179 0 1 805 192 0 125 0 chrUextra 28943959 28944007 -60649 + (GA)n Simple_repeat Simple_repeat 2 55 0 1 805 183 42 0 0 chrUextra 28944160 28944184 -60472 + (TAGA)n Simple_repeat Simple_repeat 1 24 0 1 805 1446 33 0 0 chrUextra 28944184 28944425 -60231 + (CTAG)n Simple_repeat Simple_repeat 1 241 0 1 805 1173 63 0 4 chrUextra 28944536 28944780 -59876 + (CTTAT)n Simple_repeat Simple_repeat 1 242 0 1 805 1620 0 0 0 chrUextra 28945255 28945479 -59177 + (GAGAA)n Simple_repeat Simple_repeat 1 224 0 1 805 202 265 0 0 chrUextra 28945621 28945670 -58986 + (CTG)n Simple_repeat Simple_repeat 2 50 0 1 805 218 0 0 161 chrUextra 28945987 28946180 -58476 + (CAAGA)n Simple_repeat Simple_repeat 2 163 0 1 805 1326 8 0 31 chrUextra 28946349 28946611 -58045 + (GAGAA)n Simple_repeat Simple_repeat 1 253 0 1 805 1987 57 4 4 chrUextra 28946711 28946974 -57682 - Copia_I LTR Copia -3726 867 605 1 805 2134 38 0 0 chrUextra 28947074 28947336 -57320 - ROO_I LTR Pao -7137 1119 858 1 805 271 68 0 161 chrUextra 28947485 28947696 -56960 + (TCTTG)n Simple_repeat Simple_repeat 2 178 0 1 805 446 144 61 14 chrUextra 28947833 28947981 -56675 + GA-rich Low_complexity Low_complexity 5 159 0 1 805 224 0 125 0 chrUextra 28948000 28948056 -56600 + (GA)n Simple_repeat Simple_repeat 2 64 0 1 805 371 11 0 160 chrUextra 28948158 28948371 -56285 + (CTTTG)n Simple_repeat Simple_repeat 1 179 0 1 805 224 0 0 157 chrUextra 28948308 28948416 -56240 + (ACTTG)n Simple_repeat Simple_repeat 3 93 0 1 805 404 13 68 68 chrUextra 28948554 28948715 -55941 + (TC)n Simple_repeat Simple_repeat 2 162 0 1 805 206 20 122 0 chrUextra 28948715 28948764 -55892 + (TCTA)n Simple_repeat Simple_repeat 2 56 0 1 805 1448 22 0 9 chrUextra 28949253 28949490 -55166 + (GAGAA)n Simple_repeat Simple_repeat 1 234 0 1 805 1587 16 0 0 chrUextra 28949956 28950210 -54446 + (GGAGAA)n Simple_repeat Simple_repeat 1 254 0 1 805 1395 34 0 0 chrUextra 28951027 28951204 -53452 + (CTATG)n Simple_repeat Simple_repeat 3 179 0 1 805 384 111 0 0 chrUextra 28951211 28951283 -53373 + (CTATT)n Simple_repeat Simple_repeat 1 72 0 1 805 1470 32 0 0 chrUextra 28951742 28951995 -52661 + (CAAGT)n Simple_repeat Simple_repeat 1 253 0 1 805 372 0 118 18 chrUextra 28952097 28952207 -52449 + (GA)n Simple_repeat Simple_repeat 2 122 0 1 805 329 0 0 136 chrUextra 28952207 28952347 -52309 + (CAGAGA)n Simple_repeat Simple_repeat 6 126 0 1 805 27 0 0 0 chrUextra 28952467 28952494 -52162 + AT_rich Low_complexity Low_complexity 1 27 0 1 805 2247 16 0 4 chrUextra 28952807 28953063 -51593 - SSU-rRNA_Dme rRNA rRNA -470 1525 1271 1 805 639 150 34 17 chrUextra 28953169 28953345 -51311 + GA-rich Low_complexity Low_complexity 1 179 0 1 805 1620 0 0 0 chrUextra 28953526 28953706 -50950 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 1 805 399 106 0 0 chrUextra 28953707 28953773 -50883 + (ATCG)n Simple_repeat Simple_repeat 1 66 0 1 805 1349 39 0 6 chrUextra 28953875 28954056 -50600 + (AGATG)n Simple_repeat Simple_repeat 1 180 0 1 805 549 0 0 0 chrUextra 28954066 28954127 -50529 + (ACATG)n Simple_repeat Simple_repeat 5 65 0 1 805 1488 26 0 4 chrUextra 28954230 28954458 -50198 + (CAAGA)n Simple_repeat Simple_repeat 1 226 0 1 805 1314 56 0 0 chrUextra 28954595 28954775 -49881 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 805 405 0 0 0 chrUextra 28955641 28955686 -48970 + (TATCG)n Simple_repeat Simple_repeat 1 45 0 1 805 1455 28 0 0 chrUextra 28955699 28955879 -48777 + (ATCG)n Simple_repeat Simple_repeat 1 180 0 1 805 1215 64 0 0 chrUextra 28955993 28956245 -48411 + (GAGAA)n Simple_repeat Simple_repeat 1 252 0 1 805 1190 22 0 38 chrUextra 28956697 28956882 -47774 + (GAGAA)n Simple_repeat Simple_repeat 2 179 0 1 805 444 62 0 0 chrUextra 28956884 28956948 -47708 + (AGATG)n Simple_repeat Simple_repeat 2 65 0 1 805 1340 56 4 4 chrUextra 28957049 28957297 -47359 + (TTCTC)n Simple_repeat Simple_repeat 1 248 0 1 805 2112 32 0 0 chrUextra 28957749 28957999 -46657 - SSU-rRNA_Dme rRNA rRNA -438 1557 1308 1 805 1515 36 0 0 chrUextra 28958099 28958348 -46308 + (GAGAA)n Simple_repeat Simple_repeat 1 249 0 1 805 1404 45 0 0 chrUextra 28958448 28958696 -45960 + (GAGAA)n Simple_repeat Simple_repeat 1 248 0 1 805 1368 0 0 0 chrUextra 28958796 28958948 -45708 + (GAGAA)n Simple_repeat Simple_repeat 2 153 0 1 805 1620 0 0 0 chrUextra 28959144 28959353 -45303 + (GAGAA)n Simple_repeat Simple_repeat 1 209 0 1 805 996 92 0 4 chrUextra 28959492 28959740 -44916 + (TTCTC)n Simple_repeat Simple_repeat 1 246 0 1 805 377 10 128 0 chrUextra 28959840 28959942 -44714 + (TC)n Simple_repeat Simple_repeat 1 115 0 1 805 309 26 0 0 chrUextra 28960188 28960226 -44430 + (TTCTC)n Simple_repeat Simple_repeat 5 42 0 1 805 210 37 0 0 chrUextra 28960228 28960255 -44401 + (ACTAG)n Simple_repeat Simple_repeat 4 30 0 1 805 1472 22 0 6 chrUextra 28960255 28960436 -44220 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 805 1557 17 0 0 chrUextra 28960538 28960718 -43938 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 805 496 574 11 0 chrUextra 28960747 28960923 -43733 + polypurine Low_complexity Low_complexity 3 180 0 1 805 1620 0 0 0 chrUextra 28960923 28961103 -43553 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 805 1521 17 0 0 chrUextra 28961244 28961424 -43232 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 1 805 342 0 0 0 chrUextra 28961441 28961479 -43177 + (TTCTCC)n Simple_repeat Simple_repeat 6 43 0 1 805 2190 8 0 4 chrUextra 28961579 28961826 -42830 - STALKER4_I LTR Gypsy -802 5728 5483 1 805 1560 9 0 0 chrUextra 28961926 28962145 -42511 + (GAGAA)n Simple_repeat Simple_repeat 1 219 0 1 805 395 0 0 163 chrUextra 28962301 28962516 -42140 + (CTATG)n Simple_repeat Simple_repeat 1 180 0 1 805 561 15 0 0 chrUextra 28962620 28962686 -41970 + (TTCTC)n Simple_repeat Simple_repeat 3 68 0 1 805 1167 50 0 0 chrUextra 28962704 28962863 -41793 + (GAGAA)n Simple_repeat Simple_repeat 1 159 0 1 805 931 0 0 87 chrUextra 28962979 28963175 -41481 + (CAAGA)n Simple_repeat Simple_repeat 1 179 0 1 805 1047 8 0 0 chrUextra 28963335 28963455 -41201 + (TTCTC)n Simple_repeat Simple_repeat 4 123 0 1 805 558 0 0 0 chrUextra 28963460 28963522 -41134 + (GAGAA)n Simple_repeat Simple_repeat 5 66 0 1 805 225 163 0 0 chrUextra 28963661 28963710 -40946 + (CAAGT)n Simple_repeat Simple_repeat 2 50 0 1 805 1350 45 0 0 chrUextra 28963718 28963896 -40760 + (CAAGA)n Simple_repeat Simple_repeat 2 179 0 1 805 574 134 67 0 chrUextra 28964346 28964510 -40146 + GA-rich Low_complexity Low_complexity 5 179 0 1 805 1587 21 0 0 chrUextra 28964698 28964932 -39724 + (GAGAA)n Simple_repeat Simple_repeat 1 234 0 1 805 1584 0 0 0 chrUextra 28965032 28965208 -39448 + (CAAGA)n Simple_repeat Simple_repeat 5 180 0 1 805 1620 5 0 0 chrUextra 28965375 28965579 -39077 + (GAGAA)n Simple_repeat Simple_repeat 1 204 0 1 805 1173 145 18 0 chrUextra 28966060 28966287 -38369 + DMSAT6 Satellite Satellite 231 461 -9 1 805 612 0 0 0 chrUextra 28966401 28966469 -38187 + (GAGAA)n Simple_repeat Simple_repeat 2 69 0 1 805 1356 30 0 0 chrUextra 28966473 28966642 -38014 + (ATAAG)n Simple_repeat Simple_repeat 5 173 0 1 100 1620 0 0 0 chrUextra 28966742 28966946 -37710 + (GAGAA)n Simple_repeat Simple_repeat 1 204 0 1 806 1599 6 0 0 chrUextra 28967442 28967622 -37034 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 806 1514 9 0 5 chrUextra 28968781 28968996 -35660 + (GAGAA)n Simple_repeat Simple_repeat 1 214 0 1 806 1491 27 0 5 chrUextra 28969127 28969355 -35301 + (GAGAA)n Simple_repeat Simple_repeat 1 226 0 1 806 203 0 0 160 chrUextra 28969458 28969633 -35023 + (CAAGA)n Simple_repeat Simple_repeat 2 148 0 1 806 565 142 59 6 chrUextra 28969793 28969963 -34693 + GA-rich Low_complexity Low_complexity 1 179 0 1 806 1131 74 0 0 chrUextra 28970128 28970360 -34296 + (GAGAA)n Simple_repeat Simple_repeat 1 232 0 1 806 286 610 0 11 chrUextra 28970360 28970506 -34150 + (ATAAG)n Simple_repeat Simple_repeat 2 146 0 1 806 1434 33 0 0 chrUextra 28970506 28970686 -33970 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 806 1375 28 0 11 chrUextra 28970807 28970989 -33667 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 1 806 449 578 0 6 chrUextra 28970999 28971180 -33476 + polypyrimidine Low_complexity Low_complexity 1 180 0 1 806 1383 46 0 0 chrUextra 28971194 28971369 -33287 + (GAGAA)n Simple_repeat Simple_repeat 1 175 0 1 806 891 123 0 7 chrUextra 28971469 28971616 -33040 - ARS406_DM Unknown Unknown -207 146 1 1 806 828 220 14 27 chrUextra 28971476 28971696 -32960 + SAR_DM Satellite Satellite 507 723 -749 1 806 1347 45 0 0 chrUextra 28972470 28972649 -32007 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 806 378 57 0 0 chrUextra 28972649 28972702 -31954 + (CGAGA)n Simple_repeat Simple_repeat 1 53 0 1 806 1620 0 0 0 chrUextra 28972807 28972987 -31669 + (CACAA)n Simple_repeat Simple_repeat 1 180 0 1 806 357 24 0 0 chrUextra 28972987 28973029 -31627 + (CACAG)n Simple_repeat Simple_repeat 1 42 0 1 806 283 96 19 19 chrUextra 28973135 28973149 -31507 + (GGAGA)n Simple_repeat Simple_repeat 3 16 0 1 806 1515 28 0 0 chrUextra 28973149 28973329 -31327 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 806 283 96 19 19 chrUextra 28973329 28973367 -31289 + (GGAGA)n Simple_repeat Simple_repeat 2 40 0 1 806 459 0 0 0 chrUextra 28973467 28973518 -31138 + (GAGAA)n Simple_repeat Simple_repeat 5 55 0 1 806 1368 67 0 0 chrUextra 28973518 28973698 -30958 + (GAAAA)n Simple_repeat Simple_repeat 1 180 0 1 806 1101 124 5 19 chrUextra 28973823 28974029 -30627 - DMSAT6 Satellite Satellite -239 231 29 1 806 1620 0 0 0 chrUextra 28974143 28974323 -30333 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 806 1460 27 0 5 chrUextra 28974465 28974690 -29966 + (TCTA)n Simple_repeat Simple_repeat 1 223 0 1 806 743 25 98 0 chrUextra 28974831 28974994 -29662 + (TTCTC)n Simple_repeat Simple_repeat 1 179 0 1 806 577 142 59 6 chrUextra 28975173 28975343 -29313 + CT-rich Low_complexity Low_complexity 1 179 0 1 806 225 83 0 0 chrUextra 28975777 28975813 -28843 + (CTTAT)n Simple_repeat Simple_repeat 5 40 0 1 806 1131 79 0 0 chrUextra 28975813 28975989 -28667 + (TTCTC)n Simple_repeat Simple_repeat 1 177 0 1 806 1521 14 0 0 chrUextra 28976105 28976324 -28332 + (CTTAT)n Simple_repeat Simple_repeat 1 219 0 1 806 1480 36 0 9 chrUextra 28976433 28976659 -27997 + (TCTA)n Simple_repeat Simple_repeat 1 223 0 1 806 261 0 0 0 chrUextra 28976759 28976788 -27868 + (GAGAA)n Simple_repeat Simple_repeat 4 32 0 1 806 1158 78 0 0 chrUextra 28976788 28976967 -27689 + (ATAAG)n Simple_repeat Simple_repeat 1 180 0 1 806 894 35 0 0 chrUextra 28977198 28977312 -27344 + (TTCTC)n Simple_repeat Simple_repeat 4 117 0 1 806 1599 14 0 0 chrUextra 28977413 28977623 -27033 + (GAGAA)n Simple_repeat Simple_repeat 1 210 0 1 806 1620 0 0 0 chrUextra 28977741 28977921 -26735 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 806 1611 0 0 0 chrUextra 28978061 28978240 -26416 + (GAGAA)n Simple_repeat Simple_repeat 2 180 0 1 806 541 142 59 6 chrUextra 28978400 28978570 -26086 + GA-rich Low_complexity Low_complexity 1 179 0 1 806 1620 0 0 0 chrUextra 28978707 28978911 -25745 + (GAGAA)n Simple_repeat Simple_repeat 1 204 0 1 806 261 75 0 0 chrUextra 28979030 28979070 -25586 + (CATGT)n Simple_repeat Simple_repeat 1 40 0 1 806 1158 78 0 0 chrUextra 28979070 28979249 -25407 + (TCTTG)n Simple_repeat Simple_repeat 1 180 0 1 806 1488 23 0 0 chrUextra 28979352 28979569 -25087 + (GAGAA)n Simple_repeat Simple_repeat 1 217 0 1 806 1065 16 0 0 chrUextra 28979673 28979796 -24860 + (TTCTC)n Simple_repeat Simple_repeat 4 126 0 1 806 1587 6 0 0 chrUextra 28979997 28980177 -24479 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 806 1224 60 0 5 chrUextra 28980312 28980530 -24126 + (TTCTC)n Simple_repeat Simple_repeat 1 217 0 1 806 1548 32 0 0 chrUextra 28980630 28980847 -23809 + (GAGAA)n Simple_repeat Simple_repeat 1 217 0 1 806 1611 0 0 0 chrUextra 28980947 28981126 -23530 + (GAGAA)n Simple_repeat Simple_repeat 2 180 0 1 806 1137 61 0 16 chrUextra 28981268 28981451 -23205 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 806 531 163 54 0 chrUextra 28981581 28981747 -22909 + GA-rich Low_complexity Low_complexity 5 179 0 1 806 1458 28 0 0 chrUextra 28981900 28982113 -22543 + (TTGTG)n Simple_repeat Simple_repeat 1 213 0 1 806 1217 61 0 6 chrUextra 28982222 28982403 -22253 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 806 1470 28 0 0 chrUextra 28982529 28982708 -21948 + (GAGAA)n Simple_repeat Simple_repeat 2 180 0 1 806 279 0 0 0 chrUextra 28982845 28982876 -21780 + (CGAGA)n Simple_repeat Simple_repeat 5 35 0 1 806 1578 11 0 0 chrUextra 28982877 28983057 -21599 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 806 1566 0 0 0 chrUextra 28983160 28983334 -21322 + (GAGAA)n Simple_repeat Simple_repeat 2 175 0 1 806 1521 15 0 0 chrUextra 28983790 28983994 -20662 + (GAGAA)n Simple_repeat Simple_repeat 1 204 0 1 806 577 142 59 6 chrUextra 28984108 28984278 -20378 + GA-rich Low_complexity Low_complexity 1 179 0 1 806 359 6 0 163 chrUextra 28984424 28984627 -20029 + (AGATG)n Simple_repeat Simple_repeat 2 171 0 1 806 1512 17 0 0 chrUextra 28984735 28984914 -19742 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 806 1054 130 0 9 chrUextra 28985044 28985257 -19399 + (TATG)n Simple_repeat Simple_repeat 1 210 0 1 806 1587 10 0 0 chrUextra 28985357 28985564 -19092 + (TTTTG)n Simple_repeat Simple_repeat 1 207 0 1 806 1452 38 0 0 chrUextra 28985672 28985883 -18773 + (TTCTC)n Simple_repeat Simple_repeat 1 211 0 1 806 1257 47 0 0 chrUextra 28985983 28986152 -18504 + (TTCTC)n Simple_repeat Simple_repeat 5 173 0 1 806 36 102 0 0 chrUextra 28986365 28986492 -18164 + AT_rich Low_complexity Low_complexity 1 127 0 1 806 1356 44 0 0 chrUextra 28986623 28986803 -17853 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 806 1382 33 0 6 chrUextra 28986921 28987102 -17554 + (ATAAG)n Simple_repeat Simple_repeat 1 180 0 1 806 213 65 0 0 chrUextra 28987102 28987133 -17523 + (GAGAA)n Simple_repeat Simple_repeat 2 32 0 1 806 288 124 234 0 chrUextra 28987235 28987380 -17276 + (CTAGT)n Simple_repeat Simple_repeat 2 180 0 1 806 1473 19 0 0 chrUextra 28987546 28987757 -16899 + (TAGA)n Simple_repeat Simple_repeat 1 211 0 1 806 441 140 66 0 chrUextra 28987857 28987993 -16663 + GA-rich Low_complexity Low_complexity 5 149 0 1 806 1620 0 0 0 chrUextra 28988483 28988663 -15993 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 806 1599 6 0 0 chrUextra 28988799 28988979 -15677 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 806 1432 17 0 11 chrUextra 28989100 28989281 -15375 + (GAGAA)n Simple_repeat Simple_repeat 2 180 0 1 806 1494 0 0 0 chrUextra 28989409 28989575 -15081 + (GAGAA)n Simple_repeat Simple_repeat 2 167 0 1 806 237 33 0 0 chrUextra 28989582 28989612 -15044 + (AGCTG)n Simple_repeat Simple_repeat 3 32 0 1 806 936 128 0 0 chrUextra 28989726 28989905 -14751 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 806 933 166 0 0 chrUextra 28990062 28990231 -14425 + (TCTCTG)n Simple_repeat Simple_repeat 1 169 0 1 806 1500 6 0 0 chrUextra 28990340 28990509 -14147 + (GAGAA)n Simple_repeat Simple_repeat 4 172 0 1 806 1566 0 0 0 chrUextra 28990639 28990813 -13843 + (GAGAA)n Simple_repeat Simple_repeat 2 175 0 1 806 722 144 28 17 chrUextra 28990945 28991122 -13534 + CT-rich Low_complexity Low_complexity 1 179 0 1 806 1515 28 0 0 chrUextra 28991265 28991445 -13211 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 806 1611 0 0 0 chrUextra 28991566 28991745 -12911 + (GAGAA)n Simple_repeat Simple_repeat 2 180 0 1 806 213 0 0 160 chrUextra 28991870 28992057 -12599 + (CAAGA)n Simple_repeat Simple_repeat 2 158 0 1 806 1449 0 0 0 chrUextra 28992165 28992326 -12330 + (GAGAA)n Simple_repeat Simple_repeat 2 162 0 1 806 1557 17 0 0 chrUextra 28992469 28992649 -12007 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 806 1419 16 5 47 chrUextra 28992778 28992970 -11686 - G_DM LINE Jockey -3 4343 4160 1 806 1548 17 0 0 chrUextra 28993070 28993249 -11407 + (GAGAA)n Simple_repeat Simple_repeat 2 180 0 1 806 551 0 124 12 chrUextra 28993383 28993544 -11112 + (GA)n Simple_repeat Simple_repeat 2 180 0 1 806 1536 22 0 0 chrUextra 28993990 28994170 -10486 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 806 533 0 126 13 chrUextra 28994273 28994432 -10224 + (GA)n Simple_repeat Simple_repeat 1 177 0 1 806 1350 19 0 0 chrUextra 28994570 28994731 -9925 + (GAGAA)n Simple_repeat Simple_repeat 2 162 0 1 806 521 134 67 0 chrUextra 28994869 28995018 -9638 + GA-rich Low_complexity Low_complexity 5 163 0 1 806 1587 6 0 0 chrUextra 28995182 28995362 -9294 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 1 806 198 0 0 0 chrUextra 28995468 28995490 -9166 + (CTAGT)n Simple_repeat Simple_repeat 4 25 0 1 806 1491 12 0 0 chrUextra 28995490 28995662 -8994 + (TTCTC)n Simple_repeat Simple_repeat 2 174 0 1 806 1395 0 0 0 chrUextra 28995762 28995917 -8739 + (GAGAA)n Simple_repeat Simple_repeat 2 156 0 1 806 1324 34 0 11 chrUextra 28996059 28996239 -8417 + (GAGAA)n Simple_repeat Simple_repeat 2 179 0 1 806 1512 17 0 0 chrUextra 28996360 28996539 -8117 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 806 1390 22 0 11 chrUextra 28996652 28996832 -7824 + (GAGAA)n Simple_repeat Simple_repeat 2 179 0 1 806 193 0 0 165 chrUextra 28997248 28997430 -7226 + (TTGTG)n Simple_repeat Simple_repeat 4 155 0 1 806 1566 0 0 0 chrUextra 28997533 28997707 -6949 + (GAGAA)n Simple_repeat Simple_repeat 2 175 0 1 806 1494 17 0 0 chrUextra 28997829 28998006 -6650 + (GAGAA)n Simple_repeat Simple_repeat 4 180 0 1 806 1387 6 0 27 chrUextra 28998121 28998306 -6350 + (AATAG)n Simple_repeat Simple_repeat 1 180 0 1 806 1554 11 0 0 chrUextra 28998414 28998594 -6062 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 1 806 1269 20 0 0 chrUextra 28999023 28999175 -5481 + (TTCTC)n Simple_repeat Simple_repeat 2 153 0 1 806 1182 41 0 17 chrUextra 28999275 28999447 -5209 + (CAAAA)n Simple_repeat Simple_repeat 3 171 0 1 806 542 0 132 6 chrUextra 28999588 28999747 -4909 + (TC)n Simple_repeat Simple_repeat 2 180 0 1 806 954 86 0 0 chrUextra 28999847 28999998 -4658 + (TAGA)n Simple_repeat Simple_repeat 2 152 0 1 806 1422 0 0 0 chrUextra 29000130 29000288 -4368 + (GAGAA)n Simple_repeat Simple_repeat 2 159 0 1 806 568 164 0 11 chrUextra 29000416 29000595 -4061 + (TCTCTG)n Simple_repeat Simple_repeat 4 180 0 1 806 1350 19 0 0 chrUextra 29000695 29000856 -3800 + (GAGAA)n Simple_repeat Simple_repeat 2 162 0 1 806 1173 15 0 0 chrUextra 29000977 29001112 -3544 + (GAGAA)n Simple_repeat Simple_repeat 2 136 0 1 806 1344 7 0 0 chrUextra 29001257 29001410 -3246 + (GAGAA)n Simple_repeat Simple_repeat 2 154 0 1 806 1359 35 0 0 chrUextra 29001537 29001710 -2946 + (GAGAA)n Simple_repeat Simple_repeat 2 174 0 1 806 834 11 0 0 chrUextra 29001814 29001909 -2747 + (GAGAA)n Simple_repeat Simple_repeat 2 96 0 1 806 1320 30 0 0 chrUextra 29002094 29002259 -2397 + (TTCTC)n Simple_repeat Simple_repeat 4 168 0 1 806 1278 37 0 0 chrUextra 29002642 29002806 -1850 + (GAGAA)n Simple_repeat Simple_repeat 1 164 0 1 806 1290 41 0 0 chrUextra 29002913 29003082 -1574 + (GAGAA)n Simple_repeat Simple_repeat 2 170 0 1 806 1326 19 0 0 chrUextra 29003182 29003339 -1317 + (CACAA)n Simple_repeat Simple_repeat 3 159 0 1 806 474 0 92 46 chrUextra 29003450 29003603 -1053 + (GA)n Simple_repeat Simple_repeat 2 161 0 1 806 629 193 0 0 chrUextra 29003714 29003833 -823 + DMRT1B LINE R1 2591 2709 -2474 1 806 377 96 0 0 chrUextra 29003824 29003876 -780 + DMRT1B LINE R1 3671 3722 -1461 1 806 1362 7 0 0 chrUextra 29003976 29004131 -525 + (TTCTC)n Simple_repeat Simple_repeat 5 159 0 1 806 1317 7 0 0 chrUextra 29004237 29004387 -269 + (GAGAA)n Simple_repeat Simple_repeat 5 154 0 1 806 1323 0 0 0 chrUextra 29004497 29004644 -12 + (CAAGA)n Simple_repeat Simple_repeat 5 151 0 1